Query psy12355
Match_columns 112
No_of_seqs 106 out of 1605
Neff 10.3
Searched_HMMs 29240
Date Fri Aug 16 16:56:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12355.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12355hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1e3j_A NADP(H)-dependent ketos 99.9 1.5E-20 5.1E-25 125.6 13.1 112 1-112 241-352 (352)
2 3m6i_A L-arabinitol 4-dehydrog 99.9 1.1E-20 3.7E-25 126.7 12.0 111 1-111 253-363 (363)
3 1pl8_A Human sorbitol dehydrog 99.8 2.8E-20 9.6E-25 124.5 13.2 109 1-111 243-351 (356)
4 4ej6_A Putative zinc-binding d 99.8 1.1E-20 3.8E-25 127.1 9.2 110 1-110 254-365 (370)
5 4a2c_A Galactitol-1-phosphate 99.8 6.3E-20 2.1E-24 122.1 9.8 108 1-109 230-346 (346)
6 2dq4_A L-threonine 3-dehydroge 99.8 1.3E-19 4.3E-24 120.8 9.6 108 1-110 232-342 (343)
7 4eez_A Alcohol dehydrogenase 1 99.8 2.2E-19 7.6E-24 119.6 10.1 107 1-111 233-340 (348)
8 1e3i_A Alcohol dehydrogenase, 99.8 1E-18 3.4E-23 117.6 10.4 106 1-109 266-376 (376)
9 3fpc_A NADP-dependent alcohol 99.8 6.7E-19 2.3E-23 117.6 9.0 110 1-110 236-352 (352)
10 2d8a_A PH0655, probable L-thre 99.8 8.9E-19 3E-23 116.9 9.5 108 1-110 237-348 (348)
11 3uko_A Alcohol dehydrogenase c 99.8 2E-18 6.8E-23 116.3 11.0 108 1-111 264-378 (378)
12 3two_A Mannitol dehydrogenase; 99.8 8.7E-19 3E-23 116.9 8.0 107 1-111 235-345 (348)
13 3s2e_A Zinc-containing alcohol 99.8 2.2E-18 7.6E-23 114.6 9.8 107 1-111 233-340 (340)
14 1p0f_A NADP-dependent alcohol 99.8 6.1E-18 2.1E-22 113.7 11.9 106 1-109 262-373 (373)
15 1rjw_A ADH-HT, alcohol dehydro 99.8 2.3E-18 8E-23 114.5 9.8 108 1-112 231-339 (339)
16 1cdo_A Alcohol dehydrogenase; 99.8 3.8E-18 1.3E-22 114.8 10.9 106 1-109 263-374 (374)
17 2jhf_A Alcohol dehydrogenase E 99.8 4E-18 1.4E-22 114.7 10.9 106 1-109 262-374 (374)
18 1f8f_A Benzyl alcohol dehydrog 99.8 2.1E-18 7.2E-23 115.9 9.5 107 1-110 259-371 (371)
19 3jv7_A ADH-A; dehydrogenase, n 99.8 1.8E-18 6E-23 115.2 8.7 104 1-109 240-345 (345)
20 2fzw_A Alcohol dehydrogenase c 99.8 4.8E-18 1.7E-22 114.2 10.8 106 1-109 261-373 (373)
21 2dph_A Formaldehyde dismutase; 99.8 1.4E-18 4.6E-23 117.8 6.8 109 1-111 255-393 (398)
22 2h6e_A ADH-4, D-arabinose 1-de 99.8 2.5E-18 8.6E-23 114.5 7.7 105 1-109 239-344 (344)
23 1jvb_A NAD(H)-dependent alcoho 99.7 5.4E-18 1.8E-22 113.0 8.1 105 1-109 241-347 (347)
24 1vj0_A Alcohol dehydrogenase, 99.7 2.7E-18 9.3E-23 115.8 6.5 106 1-110 268-379 (380)
25 2hcy_A Alcohol dehydrogenase 1 99.7 1.4E-17 4.9E-22 111.0 9.1 107 1-111 239-347 (347)
26 2cf5_A Atccad5, CAD, cinnamyl 99.7 6E-18 2.1E-22 113.2 6.8 106 1-111 245-352 (357)
27 3ip1_A Alcohol dehydrogenase, 99.7 7.6E-18 2.6E-22 114.4 7.3 104 1-110 283-393 (404)
28 1uuf_A YAHK, zinc-type alcohol 99.7 8.2E-18 2.8E-22 113.1 7.1 107 1-111 258-366 (369)
29 2cdc_A Glucose dehydrogenase g 99.7 3.3E-18 1.1E-22 114.8 5.0 109 1-110 247-366 (366)
30 2b5w_A Glucose dehydrogenase; 99.7 1.3E-18 4.6E-23 116.4 3.1 106 1-111 243-356 (357)
31 3uog_A Alcohol dehydrogenase; 99.7 1.1E-17 3.6E-22 112.3 7.3 104 1-109 258-363 (363)
32 3krt_A Crotonyl COA reductase; 99.7 3.5E-17 1.2E-21 112.6 8.7 105 1-109 315-421 (456)
33 1yqd_A Sinapyl alcohol dehydro 99.7 1.3E-17 4.4E-22 112.0 6.4 106 1-110 252-358 (366)
34 2eih_A Alcohol dehydrogenase; 99.7 5.4E-17 1.8E-21 108.1 8.9 105 1-109 236-342 (343)
35 1kol_A Formaldehyde dehydrogen 99.7 2.8E-17 9.7E-22 111.3 7.3 109 1-111 255-393 (398)
36 4a0s_A Octenoyl-COA reductase/ 99.7 1.2E-16 4E-21 109.7 10.4 106 1-110 307-414 (447)
37 3qwb_A Probable quinone oxidor 99.7 9.9E-17 3.4E-21 106.4 9.7 107 1-111 218-334 (334)
38 4a27_A Synaptic vesicle membra 99.7 6.7E-17 2.3E-21 107.9 7.6 107 1-111 209-344 (349)
39 1piw_A Hypothetical zinc-type 99.7 3.1E-17 1.1E-21 109.9 5.6 105 1-110 244-354 (360)
40 4dup_A Quinone oxidoreductase; 99.7 1.2E-16 4E-21 106.9 8.3 105 1-109 236-353 (353)
41 1h2b_A Alcohol dehydrogenase; 99.7 1.1E-16 3.6E-21 107.3 7.8 102 1-109 255-359 (359)
42 1gu7_A Enoyl-[acyl-carrier-pro 99.7 1.1E-16 3.6E-21 107.3 7.6 107 1-109 246-364 (364)
43 1zsy_A Mitochondrial 2-enoyl t 99.7 3.1E-16 1.1E-20 104.9 9.5 105 1-109 241-357 (357)
44 2j3h_A NADP-dependent oxidored 99.7 2.4E-16 8.4E-21 104.8 8.7 107 1-111 226-344 (345)
45 2j8z_A Quinone oxidoreductase; 99.7 2E-16 6.9E-21 105.7 8.3 108 1-110 232-353 (354)
46 3tqh_A Quinone oxidoreductase; 99.7 1.7E-16 5.9E-21 104.8 7.4 104 1-110 216-321 (321)
47 1wly_A CAAR, 2-haloacrylate re 99.7 2.3E-16 7.9E-21 104.6 7.9 107 1-111 215-333 (333)
48 3fbg_A Putative arginate lyase 99.7 3.7E-16 1.3E-20 104.2 8.3 106 1-111 218-339 (346)
49 4eye_A Probable oxidoreductase 99.7 2.3E-16 7.7E-21 105.1 7.1 104 1-109 228-342 (342)
50 3nx4_A Putative oxidoreductase 99.7 4E-17 1.4E-21 107.8 3.3 105 1-110 212-324 (324)
51 4b7c_A Probable oxidoreductase 99.7 4.7E-16 1.6E-20 103.2 8.3 105 1-109 219-336 (336)
52 3pi7_A NADH oxidoreductase; gr 99.6 1.4E-16 4.9E-21 106.2 5.0 104 1-109 234-349 (349)
53 3gqv_A Enoyl reductase; medium 99.6 1.3E-15 4.4E-20 102.4 9.5 111 1-111 232-362 (371)
54 1tt7_A YHFP; alcohol dehydroge 99.6 7.5E-16 2.6E-20 102.0 7.0 105 1-109 218-330 (330)
55 2zb4_A Prostaglandin reductase 99.6 1.5E-15 5E-20 101.6 8.3 107 1-111 231-353 (357)
56 4dvj_A Putative zinc-dependent 99.6 2E-15 6.9E-20 101.3 8.7 104 1-110 240-359 (363)
57 1iz0_A Quinone oxidoreductase; 99.6 6.8E-16 2.3E-20 101.1 6.3 104 1-109 190-302 (302)
58 1qor_A Quinone oxidoreductase; 99.6 1.3E-15 4.5E-20 100.7 7.1 105 1-109 210-327 (327)
59 3jyn_A Quinone oxidoreductase; 99.6 1.9E-15 6.6E-20 99.9 7.8 105 1-109 210-325 (325)
60 2c0c_A Zinc binding alcohol de 99.6 1.9E-15 6.7E-20 101.3 7.5 108 1-111 232-362 (362)
61 3gaz_A Alcohol dehydrogenase s 99.6 2.6E-15 9E-20 100.0 7.2 105 1-111 217-337 (343)
62 3gms_A Putative NADPH:quinone 99.6 8.3E-16 2.8E-20 102.2 3.0 108 1-111 214-333 (340)
63 1v3u_A Leukotriene B4 12- hydr 99.6 1.3E-14 4.4E-19 96.2 8.7 105 1-109 215-333 (333)
64 1xa0_A Putative NADPH dependen 99.6 2.3E-15 7.8E-20 99.6 4.7 104 1-110 217-328 (328)
65 1yb5_A Quinone oxidoreductase; 99.5 2.4E-14 8.1E-19 95.7 8.2 104 1-109 240-351 (351)
66 3goh_A Alcohol dehydrogenase, 99.5 7E-16 2.4E-20 101.6 0.5 105 1-111 200-315 (315)
67 3slk_A Polyketide synthase ext 99.5 1.9E-13 6.5E-18 99.5 9.6 105 1-110 413-524 (795)
68 2vn8_A Reticulon-4-interacting 99.5 1.6E-13 5.4E-18 92.4 7.0 106 1-109 249-374 (375)
69 3iup_A Putative NADPH:quinone 99.4 2.5E-13 8.4E-18 91.6 3.2 107 1-112 241-376 (379)
70 2vz8_A Fatty acid synthase; tr 99.2 3.7E-11 1.3E-15 95.5 6.9 107 1-111 1741-1858(2512)
71 1pqw_A Polyketide synthase; ro 98.6 3.2E-08 1.1E-12 60.9 3.5 74 1-76 108-193 (198)
72 3ce6_A Adenosylhomocysteinase; 97.4 2.6E-06 8.7E-11 59.4 -5.1 96 1-99 330-439 (494)
73 1l7d_A Nicotinamide nucleotide 97.0 0.00011 3.9E-09 49.6 0.4 97 1-97 258-368 (384)
74 1pjc_A Protein (L-alanine dehy 96.8 0.00076 2.6E-08 45.2 2.7 71 1-71 231-327 (361)
75 2eez_A Alanine dehydrogenase; 96.7 0.00073 2.5E-08 45.4 2.0 71 1-71 230-326 (369)
76 2vhw_A Alanine dehydrogenase; 96.4 0.0036 1.2E-07 42.2 4.0 55 1-55 232-299 (377)
77 1x13_A NAD(P) transhydrogenase 96.1 0.0034 1.2E-07 42.7 2.7 73 1-73 256-339 (401)
78 2yvl_A TRMI protein, hypotheti 92.7 0.16 5.5E-06 31.5 4.2 32 1-32 159-191 (248)
79 3fpf_A Mtnas, putative unchara 90.4 0.45 1.5E-05 31.2 4.5 33 1-33 189-224 (298)
80 3njr_A Precorrin-6Y methylase; 90.0 0.55 1.9E-05 28.5 4.4 34 1-34 123-157 (204)
81 3hm2_A Precorrin-6Y C5,15-meth 89.7 0.5 1.7E-05 27.5 4.0 34 1-34 95-130 (178)
82 2nyu_A Putative ribosomal RNA 89.1 0.26 9E-06 29.3 2.5 21 12-32 126-146 (196)
83 3gvp_A Adenosylhomocysteinase 88.6 0.21 7.3E-06 34.4 2.0 38 1-38 276-314 (435)
84 3cea_A MYO-inositol 2-dehydrog 88.4 1.7 5.9E-05 28.4 6.2 69 1-73 72-150 (346)
85 3oj0_A Glutr, glutamyl-tRNA re 88.2 0.13 4.5E-06 29.5 0.7 33 1-34 81-113 (144)
86 3e05_A Precorrin-6Y C5,15-meth 88.2 0.69 2.4E-05 27.8 4.0 33 1-33 109-144 (204)
87 1p91_A Ribosomal RNA large sub 86.5 0.25 8.4E-06 31.2 1.2 31 1-32 149-179 (269)
88 2pbf_A Protein-L-isoaspartate 85.7 0.23 7.7E-06 30.5 0.8 32 1-32 163-194 (227)
89 2yxe_A Protein-L-isoaspartate 85.3 0.24 8.4E-06 30.0 0.8 31 1-31 147-177 (215)
90 3tfw_A Putative O-methyltransf 84.3 0.9 3.1E-05 28.4 3.1 32 1-32 137-171 (248)
91 1r18_A Protein-L-isoaspartate( 84.3 0.29 9.9E-06 30.1 0.8 31 1-31 164-194 (227)
92 1i1n_A Protein-L-isoaspartate 83.8 0.31 1.1E-05 29.8 0.8 31 1-31 152-182 (226)
93 1u8f_O GAPDH, glyceraldehyde-3 83.4 0.97 3.3E-05 30.0 3.0 34 1-34 92-125 (335)
94 1ej0_A FTSJ; methyltransferase 83.1 1.3 4.6E-05 25.3 3.4 23 12-34 117-139 (180)
95 2pwy_A TRNA (adenine-N(1)-)-me 83.1 0.83 2.9E-05 28.4 2.6 32 1-32 167-199 (258)
96 1jg1_A PIMT;, protein-L-isoasp 82.8 0.36 1.2E-05 29.9 0.8 31 1-31 159-189 (235)
97 1rm4_O Glyceraldehyde 3-phosph 82.7 1 3.4E-05 30.1 2.9 34 1-34 92-125 (337)
98 3lbf_A Protein-L-isoaspartate 82.6 0.33 1.1E-05 29.3 0.5 31 1-31 144-174 (210)
99 3h9u_A Adenosylhomocysteinase; 82.6 0.86 3E-05 31.5 2.6 53 1-55 267-320 (436)
100 2gpy_A O-methyltransferase; st 81.5 0.85 2.9E-05 28.0 2.1 30 1-30 127-159 (233)
101 1i9g_A Hypothetical protein RV 81.3 1.1 3.6E-05 28.4 2.6 32 1-32 172-204 (280)
102 2ld4_A Anamorsin; methyltransf 80.9 1.3 4.4E-05 25.9 2.7 20 11-30 81-100 (176)
103 3mb5_A SAM-dependent methyltra 80.9 1.3 4.5E-05 27.5 2.9 31 1-31 163-194 (255)
104 2hnk_A SAM-dependent O-methylt 80.8 1 3.5E-05 27.8 2.4 31 1-31 148-181 (239)
105 4dio_A NAD(P) transhydrogenase 80.7 1.5 5E-05 30.1 3.2 71 1-71 276-356 (405)
106 1o54_A SAM-dependent O-methylt 80.7 1.1 3.9E-05 28.3 2.6 32 1-32 182-214 (277)
107 1gad_O D-glyceraldehyde-3-phos 80.5 1.1 3.8E-05 29.7 2.5 34 1-34 89-122 (330)
108 3cvo_A Methyltransferase-like 80.5 1.6 5.4E-05 26.9 3.0 29 1-29 123-152 (202)
109 1fbn_A MJ fibrillarin homologu 80.1 1.4 4.8E-05 27.1 2.8 30 1-30 144-177 (230)
110 3eey_A Putative rRNA methylase 79.9 1.2 4.2E-05 26.4 2.4 22 12-33 120-141 (197)
111 2x5j_O E4PDH, D-erythrose-4-ph 79.8 1.5 5E-05 29.3 2.9 34 1-34 93-126 (339)
112 1gpj_A Glutamyl-tRNA reductase 79.7 1.8 6.3E-05 29.3 3.4 34 1-34 228-267 (404)
113 3v1y_O PP38, glyceraldehyde-3- 79.5 2 6.8E-05 28.7 3.4 35 1-35 94-128 (337)
114 1wg8_A Predicted S-adenosylmet 79.4 1.2 4.2E-05 29.0 2.3 23 12-34 214-236 (285)
115 3pym_A GAPDH 3, glyceraldehyde 78.7 2.3 7.9E-05 28.3 3.6 35 1-35 90-124 (332)
116 3dou_A Ribosomal RNA large sub 78.0 1.4 4.9E-05 26.5 2.3 20 13-32 121-140 (191)
117 3tka_A Ribosomal RNA small sub 77.9 1.4 4.8E-05 29.5 2.3 23 12-34 255-277 (347)
118 3i23_A Oxidoreductase, GFO/IDH 77.2 9.1 0.00031 25.1 6.2 69 1-73 66-143 (349)
119 1vbf_A 231AA long hypothetical 77.2 0.71 2.4E-05 28.2 0.8 32 1-32 135-166 (231)
120 3n58_A Adenosylhomocysteinase; 76.7 1.7 5.9E-05 30.3 2.6 34 1-34 303-337 (464)
121 3d4o_A Dipicolinate synthase s 76.3 3.4 0.00012 26.6 3.9 50 1-52 214-263 (293)
122 2glx_A 1,5-anhydro-D-fructose 76.1 11 0.00037 24.4 6.2 69 1-73 63-140 (332)
123 1g8a_A Fibrillarin-like PRE-rR 75.4 2.3 7.9E-05 25.9 2.8 30 1-30 144-177 (227)
124 1b7g_O Protein (glyceraldehyde 75.3 3.6 0.00012 27.3 3.8 34 1-34 78-111 (340)
125 1nvm_B Acetaldehyde dehydrogen 75.2 1.7 5.7E-05 28.6 2.2 30 1-30 72-103 (312)
126 4fb5_A Probable oxidoreductase 75.0 11 0.00037 24.8 6.2 69 1-73 95-172 (393)
127 3m33_A Uncharacterized protein 74.9 0.81 2.8E-05 28.1 0.6 32 1-32 112-143 (226)
128 3duw_A OMT, O-methyltransferas 74.9 3.6 0.00012 24.9 3.5 31 1-31 134-167 (223)
129 2yv3_A Aspartate-semialdehyde 74.8 2.5 8.4E-05 28.0 2.9 33 1-33 62-94 (331)
130 3ond_A Adenosylhomocysteinase; 74.5 1.2 4.1E-05 31.3 1.4 35 1-35 321-356 (488)
131 2pxx_A Uncharacterized protein 74.5 1.8 6.3E-05 25.8 2.1 24 11-34 139-162 (215)
132 2fk8_A Methoxy mycolic acid sy 74.3 3.6 0.00012 26.5 3.6 32 1-32 156-195 (318)
133 3mti_A RRNA methylase; SAM-dep 74.3 1.4 4.9E-05 25.8 1.6 21 13-33 117-137 (185)
134 2gb4_A Thiopurine S-methyltran 74.3 2.9 9.9E-05 26.4 3.1 31 1-31 153-191 (252)
135 2ep7_A GAPDH, glyceraldehyde-3 74.0 3 0.0001 27.9 3.1 35 1-35 90-124 (342)
136 4had_A Probable oxidoreductase 73.7 13 0.00044 24.3 6.2 69 1-73 87-164 (350)
137 3cbg_A O-methyltransferase; cy 73.4 1.8 6.1E-05 26.7 1.9 31 1-31 149-182 (232)
138 4hkt_A Inositol 2-dehydrogenas 73.0 4.9 0.00017 26.1 4.0 69 1-73 64-141 (331)
139 4df3_A Fibrillarin-like rRNA/T 73.0 2.7 9.1E-05 26.5 2.6 30 1-30 148-181 (233)
140 2kw5_A SLR1183 protein; struct 72.9 3.8 0.00013 24.3 3.3 35 1-35 95-135 (202)
141 3rc1_A Sugar 3-ketoreductase; 72.8 7.8 0.00027 25.5 5.0 69 1-73 90-167 (350)
142 3evz_A Methyltransferase; NYSG 72.4 3.3 0.00011 25.2 2.9 20 11-30 159-178 (230)
143 2b25_A Hypothetical protein; s 72.2 2.3 7.7E-05 27.8 2.3 32 1-32 188-220 (336)
144 2d2i_A Glyceraldehyde 3-phosph 72.1 3.1 0.00011 28.3 2.9 34 1-34 92-125 (380)
145 3p2y_A Alanine dehydrogenase/p 72.0 4.3 0.00015 27.6 3.6 58 1-58 266-332 (381)
146 3b1j_A Glyceraldehyde 3-phosph 71.9 3.2 0.00011 27.7 2.9 34 1-34 92-125 (339)
147 3kux_A Putative oxidoreductase 71.7 15 0.00052 24.1 6.2 69 1-73 68-145 (352)
148 1vl5_A Unknown conserved prote 71.7 2.6 9.1E-05 26.2 2.4 31 1-31 104-140 (260)
149 3lvf_P GAPDH 1, glyceraldehyde 71.5 3.2 0.00011 27.7 2.8 34 1-34 92-125 (338)
150 2rir_A Dipicolinate synthase, 71.4 5 0.00017 25.9 3.7 50 1-52 216-265 (300)
151 1nt2_A Fibrillarin-like PRE-rR 71.3 3 0.0001 25.4 2.6 30 1-30 127-160 (210)
152 1kpg_A CFA synthase;, cyclopro 71.0 5 0.00017 25.3 3.6 21 12-32 149-169 (287)
153 3ids_C GAPDH, glyceraldehyde-3 70.8 4.1 0.00014 27.5 3.2 34 1-34 104-137 (359)
154 3gdo_A Uncharacterized oxidore 70.6 16 0.00055 24.1 6.1 69 1-73 66-143 (358)
155 1l3i_A Precorrin-6Y methyltran 70.5 2.8 9.5E-05 24.4 2.2 31 1-31 101-134 (192)
156 3fhl_A Putative oxidoreductase 70.5 16 0.00056 24.0 6.1 69 1-73 66-143 (362)
157 3doc_A Glyceraldehyde 3-phosph 70.3 3.3 0.00011 27.6 2.7 34 1-34 92-125 (335)
158 3db2_A Putative NADPH-dependen 70.2 6.3 0.00022 25.9 4.1 69 1-73 67-144 (354)
159 2f1f_A Acetolactate synthase i 70.2 6.3 0.00021 23.4 3.7 29 3-31 121-149 (164)
160 4ew6_A D-galactose-1-dehydroge 70.1 19 0.00066 23.5 6.4 69 1-73 82-159 (330)
161 3e82_A Putative oxidoreductase 69.9 18 0.0006 24.0 6.2 69 1-73 68-145 (364)
162 2g1u_A Hypothetical protein TM 69.6 5.2 0.00018 22.9 3.2 22 1-22 85-106 (155)
163 2ozp_A N-acetyl-gamma-glutamyl 69.6 4.6 0.00016 26.8 3.3 32 1-32 69-100 (345)
164 2nxc_A L11 mtase, ribosomal pr 69.6 2.3 7.8E-05 26.7 1.8 34 1-34 185-221 (254)
165 2r00_A Aspartate-semialdehyde 69.5 4.7 0.00016 26.7 3.3 33 1-33 66-98 (336)
166 3ohs_X Trans-1,2-dihydrobenzen 69.4 15 0.00051 23.9 5.7 69 1-73 67-144 (334)
167 3e9m_A Oxidoreductase, GFO/IDH 69.4 5.7 0.00019 25.9 3.7 69 1-73 68-145 (330)
168 3e18_A Oxidoreductase; dehydro 69.3 6.5 0.00022 26.0 4.0 69 1-73 66-143 (359)
169 3e5r_O PP38, glyceraldehyde-3- 69.2 3.5 0.00012 27.4 2.7 33 1-33 94-126 (337)
170 2dc1_A L-aspartate dehydrogena 69.1 5.3 0.00018 24.7 3.4 30 1-30 51-80 (236)
171 3h9e_O Glyceraldehyde-3-phosph 69.0 5.3 0.00018 26.8 3.5 34 1-34 95-128 (346)
172 2avd_A Catechol-O-methyltransf 68.6 3.7 0.00013 24.9 2.5 31 1-31 146-179 (229)
173 3pwk_A Aspartate-semialdehyde 68.6 5 0.00017 27.0 3.3 33 1-33 65-97 (366)
174 1m6y_A S-adenosyl-methyltransf 68.6 2.6 9E-05 27.5 1.9 23 12-34 226-248 (301)
175 3trk_A Nonstructural polyprote 68.3 2.9 0.0001 27.2 2.0 19 15-33 243-261 (324)
176 3v5n_A Oxidoreductase; structu 68.0 18 0.0006 24.5 6.0 69 1-73 111-188 (417)
177 4dpl_A Malonyl-COA/succinyl-CO 68.0 6.2 0.00021 26.5 3.7 33 1-33 80-112 (359)
178 4dpk_A Malonyl-COA/succinyl-CO 68.0 6.2 0.00021 26.5 3.7 33 1-33 80-112 (359)
179 3dty_A Oxidoreductase, GFO/IDH 67.8 21 0.00072 23.9 6.3 69 1-73 86-163 (398)
180 3ezy_A Dehydrogenase; structur 67.7 15 0.00052 23.9 5.5 69 1-73 65-142 (344)
181 1yb2_A Hypothetical protein TA 67.6 3.7 0.00012 26.0 2.4 32 1-32 180-212 (275)
182 1dl5_A Protein-L-isoaspartate 67.5 1.6 5.4E-05 28.4 0.7 31 1-31 145-175 (317)
183 1nkv_A Hypothetical protein YJ 67.4 2.7 9.2E-05 26.0 1.8 21 11-31 120-140 (256)
184 2plw_A Ribosomal RNA methyltra 66.8 3.3 0.00011 24.5 2.0 19 13-31 136-154 (201)
185 2cmg_A Spermidine synthase; tr 66.7 3.7 0.00013 26.1 2.3 31 1-31 140-171 (262)
186 3f4l_A Putative oxidoreductase 66.4 13 0.00043 24.4 4.9 69 1-73 66-143 (345)
187 3euw_A MYO-inositol dehydrogen 66.4 6.5 0.00022 25.7 3.5 69 1-73 66-143 (344)
188 3evn_A Oxidoreductase, GFO/IDH 66.1 11 0.00037 24.5 4.5 69 1-73 68-145 (329)
189 3hnr_A Probable methyltransfer 66.1 9.2 0.00031 22.9 4.0 19 13-31 127-145 (220)
190 3sso_A Methyltransferase; macr 66.0 4.5 0.00016 27.8 2.7 31 1-31 289-324 (419)
191 3ou2_A SAM-dependent methyltra 66.0 4.2 0.00014 24.2 2.4 24 11-34 126-149 (218)
192 3lcc_A Putative methyl chlorid 65.8 4.6 0.00016 24.6 2.6 23 12-34 152-174 (235)
193 1h6d_A Precursor form of gluco 65.7 23 0.0008 24.1 6.3 69 1-73 151-228 (433)
194 3tr6_A O-methyltransferase; ce 65.7 3.4 0.00012 25.0 2.0 31 1-31 141-174 (225)
195 1ixk_A Methyltransferase; open 65.6 4.4 0.00015 26.4 2.6 21 12-32 227-247 (315)
196 1obf_O Glyceraldehyde 3-phosph 65.2 4.3 0.00015 27.1 2.4 34 1-34 92-125 (335)
197 1cf2_P Protein (glyceraldehyde 65.0 5 0.00017 26.6 2.8 31 1-31 79-109 (337)
198 2yxl_A PH0851 protein, 450AA l 65.0 4.2 0.00014 27.9 2.5 21 12-32 370-390 (450)
199 3dr5_A Putative O-methyltransf 64.7 4.4 0.00015 24.9 2.4 31 1-31 130-163 (221)
200 1sui_A Caffeoyl-COA O-methyltr 64.5 6 0.0002 24.7 3.0 31 1-31 157-190 (247)
201 3hem_A Cyclopropane-fatty-acyl 64.4 10 0.00035 24.1 4.1 22 12-33 164-185 (302)
202 4dib_A GAPDH, glyceraldehyde 3 64.3 3.5 0.00012 27.6 1.9 34 1-34 92-125 (345)
203 3vc1_A Geranyl diphosphate 2-C 64.2 4 0.00014 26.2 2.2 22 11-32 201-222 (312)
204 1sqg_A SUN protein, FMU protei 64.2 4.8 0.00016 27.4 2.6 20 12-31 355-374 (429)
205 3ujc_A Phosphoethanolamine N-m 64.2 2.8 9.7E-05 25.9 1.4 20 13-32 141-160 (266)
206 2p41_A Type II methyltransfera 64.1 10 0.00035 24.7 4.1 18 13-30 173-190 (305)
207 3ic5_A Putative saccharopine d 63.9 7.2 0.00025 20.6 2.9 28 1-28 70-97 (118)
208 3moi_A Probable dehydrogenase; 63.8 21 0.00072 23.8 5.7 70 1-74 65-143 (387)
209 3q2i_A Dehydrogenase; rossmann 63.8 9.1 0.00031 25.2 3.8 69 1-73 76-153 (354)
210 3thr_A Glycine N-methyltransfe 63.7 3.5 0.00012 26.1 1.8 20 12-31 156-175 (293)
211 3c3p_A Methyltransferase; NP_9 63.7 4 0.00014 24.5 2.0 31 1-31 127-160 (210)
212 3sm3_A SAM-dependent methyltra 63.7 2.2 7.6E-05 25.8 0.8 23 12-34 122-144 (235)
213 3cps_A Glyceraldehyde 3-phosph 63.6 7.3 0.00025 26.1 3.3 32 1-32 106-137 (354)
214 3dr3_A N-acetyl-gamma-glutamyl 63.4 7.3 0.00025 25.9 3.3 33 1-33 76-108 (337)
215 3btv_A Galactose/lactose metab 63.4 19 0.00065 24.6 5.5 70 1-73 90-173 (438)
216 3m4x_A NOL1/NOP2/SUN family pr 62.9 4.7 0.00016 28.0 2.4 20 12-31 215-234 (456)
217 3tz6_A Aspartate-semialdehyde 62.8 7.6 0.00026 25.9 3.3 32 1-32 64-95 (344)
218 4hg2_A Methyltransferase type 62.5 5.7 0.0002 25.1 2.6 23 12-34 116-138 (257)
219 3f4k_A Putative methyltransfer 62.4 2.4 8.1E-05 26.2 0.8 21 11-31 130-150 (257)
220 1yzh_A TRNA (guanine-N(7)-)-me 62.3 13 0.00044 22.3 4.1 20 12-31 137-156 (214)
221 2bm8_A Cephalosporin hydroxyla 62.2 8.7 0.0003 23.8 3.4 31 1-31 153-187 (236)
222 2p2s_A Putative oxidoreductase 62.2 29 0.001 22.5 6.9 69 1-73 67-145 (336)
223 3opn_A Putative hemolysin; str 62.1 2.4 8.2E-05 26.4 0.8 20 11-30 117-136 (232)
224 1xyg_A Putative N-acetyl-gamma 62.1 8.6 0.00029 25.7 3.5 31 1-32 83-113 (359)
225 2czc_A Glyceraldehyde-3-phosph 61.9 8.8 0.0003 25.3 3.5 32 1-33 80-111 (334)
226 3mz0_A Inositol 2-dehydrogenas 61.9 25 0.00086 22.9 5.7 69 1-73 67-145 (344)
227 2o57_A Putative sarcosine dime 61.8 5.4 0.00018 25.3 2.4 20 12-31 168-187 (297)
228 1xxl_A YCGJ protein; structura 61.7 5.6 0.00019 24.4 2.4 21 12-32 105-125 (239)
229 2b4r_O Glyceraldehyde-3-phosph 61.4 6.6 0.00023 26.3 2.8 34 1-34 100-133 (345)
230 1zh8_A Oxidoreductase; TM0312, 61.2 31 0.0011 22.5 6.3 69 1-73 83-160 (340)
231 1o9g_A RRNA methyltransferase; 60.9 17 0.00057 22.4 4.5 22 12-33 195-216 (250)
232 3i9f_A Putative type 11 methyl 60.4 6.2 0.00021 22.6 2.4 23 12-34 93-115 (170)
233 3oa2_A WBPB; oxidoreductase, s 60.0 27 0.00092 22.7 5.6 69 1-73 74-151 (318)
234 3g07_A 7SK snRNA methylphospha 59.4 3.8 0.00013 26.2 1.4 19 12-30 201-219 (292)
235 2ep5_A 350AA long hypothetical 59.4 8.6 0.0003 25.5 3.1 32 1-32 78-109 (350)
236 2hjs_A USG-1 protein homolog; 59.3 7.9 0.00027 25.7 2.9 32 1-32 69-100 (340)
237 3dlc_A Putative S-adenosyl-L-m 59.3 8.8 0.0003 22.7 3.0 24 11-34 128-151 (219)
238 1zx0_A Guanidinoacetate N-meth 59.2 4.1 0.00014 25.0 1.5 18 14-31 153-170 (236)
239 3c8m_A Homoserine dehydrogenas 58.9 12 0.00042 24.6 3.8 30 1-30 87-120 (331)
240 3l8d_A Methyltransferase; stru 58.9 7.4 0.00025 23.7 2.6 23 12-34 134-156 (242)
241 1t4b_A Aspartate-semialdehyde 58.7 8.6 0.0003 25.8 3.1 31 1-31 66-96 (367)
242 3e8s_A Putative SAM dependent 58.6 7.2 0.00024 23.3 2.5 24 11-34 132-155 (227)
243 3kkz_A Uncharacterized protein 58.5 4.3 0.00015 25.3 1.5 21 11-31 130-150 (267)
244 1j5p_A Aspartate dehydrogenase 58.5 12 0.0004 23.9 3.5 32 1-32 61-92 (253)
245 2yqz_A Hypothetical protein TT 58.1 7.8 0.00027 23.9 2.7 20 11-30 121-140 (263)
246 1dus_A MJ0882; hypothetical pr 57.8 8.9 0.0003 22.2 2.8 23 12-34 138-160 (194)
247 1vpd_A Tartronate semialdehyde 57.6 16 0.00053 23.2 4.1 31 1-31 62-99 (299)
248 3grz_A L11 mtase, ribosomal pr 57.6 3.8 0.00013 24.4 1.1 33 1-33 126-161 (205)
249 1xea_A Oxidoreductase, GFO/IDH 57.2 22 0.00077 22.9 4.8 69 1-73 64-141 (323)
250 2g82_O GAPDH, glyceraldehyde-3 57.2 5.6 0.00019 26.4 1.9 34 1-34 87-120 (331)
251 4dmg_A Putative uncharacterize 57.2 11 0.00038 25.5 3.4 23 12-34 307-329 (393)
252 3e23_A Uncharacterized protein 57.0 5.7 0.00019 23.7 1.8 21 12-32 122-142 (211)
253 2p35_A Trans-aconitate 2-methy 57.0 6.1 0.00021 24.3 2.0 20 12-31 113-132 (259)
254 3g89_A Ribosomal RNA small sub 56.9 9 0.00031 24.0 2.8 31 1-31 152-184 (249)
255 3g5t_A Trans-aconitate 3-methy 56.8 7.8 0.00027 24.6 2.6 22 11-32 129-150 (299)
256 4gqa_A NAD binding oxidoreduct 56.5 31 0.0011 23.1 5.5 69 1-73 97-174 (412)
257 1mjf_A Spermidine synthase; sp 56.4 7.8 0.00027 24.7 2.5 21 11-31 173-193 (281)
258 3h2b_A SAM-dependent methyltra 56.4 6.5 0.00022 23.2 2.0 22 12-33 122-143 (203)
259 2ipx_A RRNA 2'-O-methyltransfe 55.6 9 0.00031 23.4 2.6 30 1-30 148-181 (233)
260 2frn_A Hypothetical protein PH 55.5 8.1 0.00028 24.5 2.4 32 1-32 193-226 (278)
261 2yyy_A Glyceraldehyde-3-phosph 55.5 17 0.00059 24.2 4.1 33 1-34 82-115 (343)
262 2nvw_A Galactose/lactose metab 55.4 38 0.0013 23.5 5.9 70 1-73 109-193 (479)
263 3c3y_A Pfomt, O-methyltransfer 55.3 6.4 0.00022 24.3 1.9 31 1-31 148-181 (237)
264 1xj5_A Spermidine synthase 1; 55.3 8.9 0.0003 25.3 2.7 20 11-30 215-234 (334)
265 3ntv_A MW1564 protein; rossman 55.2 8.6 0.00029 23.6 2.5 31 1-31 143-176 (232)
266 2ex4_A Adrenal gland protein A 55.1 6.9 0.00024 24.0 2.0 20 12-31 166-185 (241)
267 3cmc_O GAPDH, glyceraldehyde-3 55.0 9.2 0.00032 25.4 2.7 25 1-25 89-113 (334)
268 3dh0_A SAM dependent methyltra 55.0 7.1 0.00024 23.4 2.0 22 12-33 124-145 (219)
269 3r3h_A O-methyltransferase, SA 54.9 7.4 0.00025 24.2 2.1 20 12-31 151-170 (242)
270 2pc6_A Probable acetolactate s 54.8 11 0.00038 22.4 2.8 27 3-30 122-148 (165)
271 1iy9_A Spermidine synthase; ro 54.8 9 0.00031 24.4 2.6 21 11-31 169-189 (275)
272 1f06_A MESO-diaminopimelate D- 54.8 12 0.00042 24.3 3.3 31 1-32 59-89 (320)
273 3bkw_A MLL3908 protein, S-aden 54.7 8.6 0.00029 23.3 2.4 20 12-31 125-144 (243)
274 1ebf_A Homoserine dehydrogenas 54.7 7 0.00024 26.2 2.1 28 2-29 86-113 (358)
275 2vdv_E TRNA (guanine-N(7)-)-me 54.6 8.9 0.0003 23.7 2.5 20 12-31 154-173 (246)
276 1hdg_O Holo-D-glyceraldehyde-3 54.4 9.6 0.00033 25.3 2.7 25 1-25 90-114 (332)
277 1ws6_A Methyltransferase; stru 54.3 14 0.00049 20.9 3.2 24 12-35 126-151 (171)
278 1ys4_A Aspartate-semialdehyde 54.3 12 0.00041 24.9 3.2 32 1-32 84-115 (354)
279 4dzr_A Protein-(glutamine-N5) 53.9 11 0.00036 22.3 2.7 21 12-32 145-165 (215)
280 3m70_A Tellurite resistance pr 53.3 12 0.0004 23.6 2.9 21 12-32 204-224 (286)
281 3ajd_A Putative methyltransfer 53.2 10 0.00036 23.9 2.7 20 12-31 192-211 (274)
282 2fca_A TRNA (guanine-N(7)-)-me 53.0 21 0.00073 21.5 4.0 20 12-31 134-153 (213)
283 1jw9_B Molybdopterin biosynthe 52.8 9 0.00031 24.1 2.3 30 1-30 122-151 (249)
284 3adn_A Spermidine synthase; am 52.4 12 0.0004 24.2 2.8 20 12-31 179-198 (294)
285 3lpm_A Putative methyltransfer 52.4 13 0.00043 23.2 2.9 20 12-31 157-176 (259)
286 2xyq_A Putative 2'-O-methyl tr 52.3 9.8 0.00033 24.7 2.4 20 12-31 152-171 (290)
287 2o07_A Spermidine synthase; st 52.3 8.2 0.00028 25.0 2.1 20 12-31 190-209 (304)
288 2vdw_A Vaccinia virus capping 51.9 9.9 0.00034 24.6 2.4 21 11-31 149-169 (302)
289 1inl_A Spermidine synthase; be 51.8 8.8 0.0003 24.7 2.2 20 12-31 186-205 (296)
290 3hsk_A Aspartate-semialdehyde 51.5 15 0.00053 24.8 3.4 33 1-33 94-126 (381)
291 2z2v_A Hypothetical protein PH 51.2 32 0.0011 22.9 4.9 32 1-32 78-109 (365)
292 2ozv_A Hypothetical protein AT 51.0 11 0.00038 23.6 2.5 20 12-31 151-170 (260)
293 1ri5_A MRNA capping enzyme; me 50.9 11 0.00036 23.7 2.4 20 12-31 155-174 (298)
294 2ip2_A Probable phenazine-spec 50.8 23 0.00077 22.9 4.0 21 12-32 253-273 (334)
295 2a14_A Indolethylamine N-methy 50.5 9 0.00031 24.0 2.1 22 12-33 178-199 (263)
296 1vm6_A DHPR, dihydrodipicolina 50.2 14 0.0005 23.2 2.9 33 1-34 54-86 (228)
297 3l5o_A Uncharacterized protein 49.8 49 0.0017 21.3 6.0 66 1-72 187-255 (270)
298 2nqt_A N-acetyl-gamma-glutamyl 49.6 15 0.0005 24.6 3.0 32 1-33 81-112 (352)
299 3bio_A Oxidoreductase, GFO/IDH 49.5 19 0.00063 23.3 3.4 72 1-73 66-142 (304)
300 4dcm_A Ribosomal RNA large sub 49.5 16 0.00055 24.5 3.2 22 13-34 316-337 (375)
301 2b2c_A Spermidine synthase; be 49.2 11 0.00037 24.7 2.3 21 11-31 202-222 (314)
302 1xtp_A LMAJ004091AAA; SGPP, st 48.9 9.9 0.00034 23.3 2.0 20 12-31 178-197 (254)
303 3cgg_A SAM-dependent methyltra 48.9 16 0.00056 21.0 2.9 20 12-31 128-147 (195)
304 3ocj_A Putative exported prote 48.8 16 0.00055 23.3 3.1 22 13-34 209-230 (305)
305 2frx_A Hypothetical protein YE 48.8 11 0.00037 26.3 2.4 19 13-31 228-246 (479)
306 2g72_A Phenylethanolamine N-me 48.4 10 0.00035 24.0 2.1 20 13-32 197-216 (289)
307 2aot_A HMT, histamine N-methyl 48.4 10 0.00035 24.0 2.1 20 12-31 153-172 (292)
308 3hp7_A Hemolysin, putative; st 48.3 25 0.00084 22.9 3.8 20 11-30 165-184 (291)
309 3orh_A Guanidinoacetate N-meth 48.2 6.6 0.00023 24.2 1.1 19 13-31 152-170 (236)
310 2fgc_A Acetolactate synthase, 47.6 24 0.00081 21.6 3.5 27 3-30 148-174 (193)
311 2qm3_A Predicted methyltransfe 47.3 31 0.0011 22.9 4.3 34 1-34 242-280 (373)
312 3pfg_A N-methyltransferase; N, 47.2 8.8 0.0003 23.8 1.6 18 13-30 133-150 (263)
313 3jwh_A HEN1; methyltransferase 47.2 18 0.00061 21.6 3.0 19 12-30 122-140 (217)
314 3ckk_A TRNA (guanine-N(7)-)-me 47.1 14 0.00048 22.8 2.5 20 12-31 149-168 (235)
315 2h1q_A Hypothetical protein; Z 46.9 55 0.0019 21.0 6.0 66 1-72 187-255 (270)
316 3dxy_A TRNA (guanine-N(7)-)-me 46.9 14 0.00049 22.5 2.5 19 13-31 132-150 (218)
317 3p9n_A Possible methyltransfer 46.9 28 0.00095 20.2 3.8 21 13-33 133-155 (189)
318 1u2z_A Histone-lysine N-methyl 46.6 16 0.00054 25.2 2.8 31 1-31 324-359 (433)
319 2ejw_A HDH, homoserine dehydro 46.6 21 0.00073 23.6 3.4 29 1-29 67-96 (332)
320 3ccf_A Cyclopropane-fatty-acyl 46.6 14 0.00046 23.2 2.4 21 12-32 135-155 (279)
321 3oig_A Enoyl-[acyl-carrier-pro 46.5 28 0.00095 21.6 3.9 19 14-32 130-148 (266)
322 4gek_A TRNA (CMO5U34)-methyltr 45.8 12 0.00041 23.6 2.1 19 13-31 160-178 (261)
323 1tlt_A Putative oxidoreductase 45.6 29 0.001 22.3 3.9 28 1-28 66-93 (319)
324 3bwc_A Spermidine synthase; SA 45.6 19 0.00066 23.2 3.1 21 12-32 191-211 (304)
325 2cvz_A Dehydrogenase, 3-hydrox 45.5 27 0.00093 21.9 3.7 32 1-32 56-91 (289)
326 2oxt_A Nucleoside-2'-O-methylt 45.5 21 0.00072 22.6 3.2 18 13-30 165-184 (265)
327 3oqb_A Oxidoreductase; structu 45.4 63 0.0022 21.3 5.9 69 1-73 84-161 (383)
328 3id6_C Fibrillarin-like rRNA/T 45.4 16 0.00056 22.8 2.6 13 18-30 168-180 (232)
329 1p9l_A Dihydrodipicolinate red 45.3 29 0.00097 21.9 3.7 31 1-32 46-76 (245)
330 3mgg_A Methyltransferase; NYSG 45.3 12 0.00041 23.3 2.0 20 12-31 123-142 (276)
331 2pjd_A Ribosomal RNA small sub 45.0 20 0.00067 23.5 3.1 22 12-33 284-305 (343)
332 4f3y_A DHPR, dihydrodipicolina 44.3 20 0.00067 23.0 2.9 31 1-32 74-104 (272)
333 1r0k_A 1-deoxy-D-xylulose 5-ph 43.2 31 0.0011 23.5 3.8 30 1-30 94-123 (388)
334 1dih_A Dihydrodipicolinate red 43.0 31 0.0011 22.0 3.7 32 1-33 73-104 (273)
335 2i7c_A Spermidine synthase; tr 42.8 18 0.0006 23.1 2.5 21 12-32 173-193 (283)
336 4gua_A Non-structural polyprot 42.4 18 0.00061 26.3 2.6 18 15-32 253-270 (670)
337 3dfz_A SIRC, precorrin-2 dehyd 42.3 40 0.0014 20.9 4.0 47 1-48 92-138 (223)
338 1jsx_A Glucose-inhibited divis 41.9 11 0.00037 22.3 1.4 20 12-31 146-165 (207)
339 2dul_A N(2),N(2)-dimethylguano 41.7 19 0.00066 24.2 2.6 31 1-31 132-164 (378)
340 3pzr_A Aspartate-semialdehyde 41.7 25 0.00084 23.8 3.1 32 1-32 65-98 (370)
341 2ift_A Putative methylase HI07 41.6 16 0.00054 21.8 2.1 22 13-34 143-166 (201)
342 3pef_A 6-phosphogluconate dehy 41.3 41 0.0014 21.2 4.1 31 1-31 58-95 (287)
343 3npg_A Uncharacterized DUF364 41.1 67 0.0023 20.3 6.6 67 1-72 165-234 (249)
344 3do5_A HOM, homoserine dehydro 40.9 33 0.0011 22.6 3.6 30 1-30 81-114 (327)
345 1pjz_A Thiopurine S-methyltran 40.7 21 0.00072 21.3 2.5 19 13-31 122-140 (203)
346 4fzv_A Putative methyltransfer 40.7 13 0.00046 24.9 1.7 19 13-31 266-284 (359)
347 3upl_A Oxidoreductase; rossman 40.5 40 0.0014 23.4 4.1 29 1-29 108-137 (446)
348 3ggd_A SAM-dependent methyltra 40.4 24 0.00081 21.5 2.8 23 12-34 144-166 (245)
349 2uyy_A N-PAC protein; long-cha 40.2 44 0.0015 21.4 4.1 31 1-31 87-124 (316)
350 3uwp_A Histone-lysine N-methyl 40.0 26 0.00088 24.4 3.1 20 12-31 269-288 (438)
351 3m6w_A RRNA methylase; rRNA me 39.9 18 0.00063 25.1 2.4 20 12-31 210-229 (464)
352 1omo_A Alanine dehydrogenase; 39.8 9.4 0.00032 25.0 0.9 39 1-40 188-227 (322)
353 3rht_A (gatase1)-like protein; 39.8 47 0.0016 21.2 4.1 34 1-34 51-89 (259)
354 3dmg_A Probable ribosomal RNA 39.5 24 0.00083 23.7 2.9 23 12-34 321-343 (381)
355 3p2e_A 16S rRNA methylase; met 39.5 14 0.00049 22.6 1.7 19 12-30 120-138 (225)
356 3uw3_A Aspartate-semialdehyde 39.4 28 0.00095 23.6 3.1 32 1-32 69-102 (377)
357 2pt6_A Spermidine synthase; tr 39.4 21 0.00072 23.3 2.5 21 11-31 210-230 (321)
358 2i62_A Nicotinamide N-methyltr 39.3 17 0.00059 22.3 2.1 21 13-33 180-200 (265)
359 3dtn_A Putative methyltransfer 38.8 18 0.00062 21.8 2.1 20 13-32 130-149 (234)
360 3uuw_A Putative oxidoreductase 38.7 39 0.0013 21.6 3.7 29 1-30 67-95 (308)
361 1uir_A Polyamine aminopropyltr 38.6 22 0.00076 23.0 2.5 20 12-31 176-195 (314)
362 3ijp_A DHPR, dihydrodipicolina 38.4 27 0.00094 22.7 2.9 31 1-32 89-119 (288)
363 3hdj_A Probable ornithine cycl 38.4 15 0.0005 24.1 1.7 41 1-42 184-225 (313)
364 3bgv_A MRNA CAP guanine-N7 met 38.3 20 0.00068 22.9 2.3 20 12-31 136-155 (313)
365 3g0o_A 3-hydroxyisobutyrate de 38.3 49 0.0017 21.1 4.1 31 1-31 65-102 (303)
366 3c85_A Putative glutathione-re 38.2 42 0.0014 19.4 3.6 10 2-11 107-116 (183)
367 3mtj_A Homoserine dehydrogenas 37.9 38 0.0013 23.4 3.7 29 1-29 79-108 (444)
368 2h78_A Hibadh, 3-hydroxyisobut 37.8 50 0.0017 20.9 4.1 31 1-31 60-97 (302)
369 2esr_A Methyltransferase; stru 37.8 37 0.0013 19.3 3.3 23 13-35 118-142 (177)
370 1ydw_A AX110P-like protein; st 37.8 41 0.0014 22.0 3.8 29 1-30 72-100 (362)
371 3ew7_A LMO0794 protein; Q8Y8U8 37.7 57 0.0019 19.2 4.2 32 1-32 62-103 (221)
372 3mq2_A 16S rRNA methyltransfer 37.7 16 0.00054 21.9 1.6 20 11-30 120-139 (218)
373 3abi_A Putative uncharacterize 37.2 88 0.003 20.6 5.7 56 1-57 78-134 (365)
374 4a5o_A Bifunctional protein fo 37.1 16 0.00056 23.8 1.7 32 1-34 205-236 (286)
375 3ing_A Homoserine dehydrogenas 37.1 30 0.001 22.8 3.0 30 1-30 83-116 (325)
376 3dli_A Methyltransferase; PSI- 37.0 23 0.00079 21.5 2.3 21 12-32 121-141 (240)
377 1lc0_A Biliverdin reductase A; 37.0 30 0.001 22.1 2.9 69 1-73 66-143 (294)
378 3grk_A Enoyl-(acyl-carrier-pro 36.8 47 0.0016 21.1 3.8 19 14-32 152-170 (293)
379 3ec7_A Putative dehydrogenase; 36.7 42 0.0014 22.1 3.7 69 1-73 88-166 (357)
380 3l07_A Bifunctional protein fo 36.2 13 0.00045 24.2 1.1 32 1-34 205-236 (285)
381 2xvm_A Tellurite resistance pr 36.1 22 0.00075 20.6 2.1 21 12-32 117-137 (199)
382 3lst_A CALO1 methyltransferase 36.1 31 0.0011 22.5 3.0 21 12-32 267-287 (348)
383 3c1a_A Putative oxidoreductase 36.1 41 0.0014 21.6 3.5 28 1-28 70-97 (315)
384 1g0o_A Trihydroxynaphthalene r 36.0 51 0.0017 20.6 3.9 18 15-32 147-164 (283)
385 3u81_A Catechol O-methyltransf 35.7 44 0.0015 20.0 3.5 13 19-31 158-170 (221)
386 2ho3_A Oxidoreductase, GFO/IDH 35.6 46 0.0016 21.4 3.7 69 1-73 63-140 (325)
387 1a4i_A Methylenetetrahydrofola 35.6 11 0.00039 24.7 0.7 32 1-34 209-240 (301)
388 1fjh_A 3alpha-hydroxysteroid d 35.6 53 0.0018 20.0 3.9 16 83-98 217-232 (257)
389 1wxx_A TT1595, hypothetical pr 35.4 39 0.0013 22.5 3.4 22 13-34 307-328 (382)
390 3ege_A Putative methyltransfer 35.3 41 0.0014 20.8 3.3 21 12-33 112-132 (261)
391 3doj_A AT3G25530, dehydrogenas 35.1 59 0.002 20.9 4.1 31 1-31 78-115 (310)
392 2igt_A SAM dependent methyltra 35.1 64 0.0022 21.1 4.3 20 12-31 253-272 (332)
393 4a26_A Putative C-1-tetrahydro 34.9 14 0.00048 24.2 1.1 31 1-33 211-241 (300)
394 3hja_A GAPDH, glyceraldehyde-3 34.7 12 0.0004 25.3 0.7 34 1-34 108-146 (356)
395 3cky_A 2-hydroxymethyl glutara 34.5 61 0.0021 20.4 4.1 31 1-31 61-98 (301)
396 3ngx_A Bifunctional protein fo 34.3 14 0.00049 23.9 1.1 32 1-34 194-225 (276)
397 3qy9_A DHPR, dihydrodipicolina 34.3 49 0.0017 20.8 3.5 30 1-33 55-84 (243)
398 3reo_A (ISO)eugenol O-methyltr 34.2 30 0.001 22.9 2.7 20 13-32 282-301 (368)
399 2zfu_A Nucleomethylin, cerebra 34.1 24 0.00083 20.9 2.1 21 12-32 132-152 (215)
400 3is3_A 17BETA-hydroxysteroid d 33.7 48 0.0016 20.6 3.5 21 14-34 135-155 (270)
401 3bzb_A Uncharacterized protein 33.6 56 0.0019 20.6 3.8 20 12-31 181-205 (281)
402 1edz_A 5,10-methylenetetrahydr 33.6 10 0.00036 25.0 0.4 32 1-34 246-278 (320)
403 3pdu_A 3-hydroxyisobutyrate de 33.5 64 0.0022 20.3 4.1 31 1-31 58-95 (287)
404 2p8j_A S-adenosylmethionine-de 33.4 25 0.00087 20.6 2.1 21 12-32 109-129 (209)
405 3i53_A O-methyltransferase; CO 33.4 34 0.0012 22.1 2.8 21 12-32 255-275 (332)
406 3mvn_A UDP-N-acetylmuramate:L- 33.4 57 0.002 18.8 3.6 29 3-31 39-70 (163)
407 2gs9_A Hypothetical protein TT 33.3 33 0.0011 20.2 2.6 23 12-34 113-135 (211)
408 3o9z_A Lipopolysaccaride biosy 33.2 53 0.0018 21.2 3.7 67 1-71 73-148 (312)
409 1zud_1 Adenylyltransferase THI 33.1 38 0.0013 21.2 2.9 26 1-26 119-144 (251)
410 1ve3_A Hypothetical protein PH 33.0 26 0.00088 20.9 2.1 21 12-32 123-143 (227)
411 3gjy_A Spermidine synthase; AP 32.7 32 0.0011 22.6 2.6 21 12-32 181-201 (317)
412 2p7i_A Hypothetical protein; p 32.4 25 0.00084 21.2 1.9 21 12-32 121-142 (250)
413 4a6d_A Hydroxyindole O-methylt 32.3 34 0.0012 22.5 2.7 20 13-32 265-284 (353)
414 1yb4_A Tartronic semialdehyde 32.3 61 0.0021 20.3 3.8 31 1-31 59-96 (295)
415 2as0_A Hypothetical protein PH 32.3 44 0.0015 22.3 3.2 22 12-33 316-337 (396)
416 3dp7_A SAM-dependent methyltra 32.1 35 0.0012 22.5 2.7 20 13-32 269-288 (363)
417 2nu8_A Succinyl-COA ligase [AD 31.9 49 0.0017 21.2 3.3 28 1-28 65-92 (288)
418 3v2g_A 3-oxoacyl-[acyl-carrier 31.7 67 0.0023 20.1 3.9 19 14-32 148-166 (271)
419 3p9c_A Caffeic acid O-methyltr 31.6 35 0.0012 22.5 2.7 21 12-32 279-299 (364)
420 3g5l_A Putative S-adenosylmeth 31.5 28 0.00095 21.3 2.1 19 12-30 126-144 (253)
421 3axs_A Probable N(2),N(2)-dime 31.4 33 0.0011 23.3 2.5 31 1-31 126-158 (392)
422 3p2o_A Bifunctional protein fo 31.1 19 0.00065 23.4 1.3 32 1-34 204-235 (285)
423 1xdz_A Methyltransferase GIDB; 31.1 29 0.00098 21.2 2.1 30 1-30 142-173 (240)
424 3gu3_A Methyltransferase; alph 30.8 29 0.00098 21.8 2.1 20 12-31 107-126 (284)
425 4dll_A 2-hydroxy-3-oxopropiona 30.8 68 0.0023 20.7 3.9 31 1-31 88-124 (320)
426 4htf_A S-adenosylmethionine-de 30.8 29 0.00098 21.7 2.1 21 12-32 154-174 (285)
427 3d2l_A SAM-dependent methyltra 30.6 26 0.0009 21.1 1.8 17 13-29 119-135 (243)
428 2ahr_A Putative pyrroline carb 30.5 52 0.0018 20.3 3.2 29 1-30 61-89 (259)
429 2l48_A N-acetylmuramoyl-L-alan 30.4 64 0.0022 16.9 3.5 30 79-109 23-52 (85)
430 3bt7_A TRNA (uracil-5-)-methyl 30.4 28 0.00094 23.1 2.0 16 16-31 311-326 (369)
431 2kln_A Probable sulphate-trans 30.3 41 0.0014 18.4 2.5 14 86-99 112-125 (130)
432 3soz_A ORF 245 protein, cytopl 30.1 1E+02 0.0035 19.5 4.5 21 14-34 101-121 (248)
433 2an1_A Putative kinase; struct 30.0 77 0.0026 20.1 4.0 58 1-73 64-121 (292)
434 3uce_A Dehydrogenase; rossmann 29.9 43 0.0015 20.1 2.7 19 14-32 99-117 (223)
435 2hwk_A Helicase NSP2; rossman 29.8 32 0.0011 22.7 2.1 22 14-35 237-258 (320)
436 2qe6_A Uncharacterized protein 29.7 47 0.0016 21.0 2.9 23 12-34 177-199 (274)
437 3bxo_A N,N-dimethyltransferase 29.7 28 0.00096 20.9 1.9 20 12-31 122-141 (239)
438 1b0a_A Protein (fold bifunctio 29.5 11 0.00038 24.6 -0.0 32 1-34 203-234 (288)
439 2yx1_A Hypothetical protein MJ 29.5 35 0.0012 22.3 2.4 23 12-34 272-294 (336)
440 3k31_A Enoyl-(acyl-carrier-pro 29.5 73 0.0025 20.2 3.9 18 15-32 152-169 (296)
441 1guz_A Malate dehydrogenase; o 29.5 76 0.0026 20.5 3.9 34 1-34 70-121 (310)
442 3bus_A REBM, methyltransferase 29.4 29 0.001 21.4 1.9 20 12-31 147-166 (273)
443 2c2x_A Methylenetetrahydrofola 29.3 13 0.00045 24.1 0.3 32 1-34 204-235 (281)
444 2wa2_A Non-structural protein 29.3 48 0.0016 21.1 2.9 18 13-30 173-192 (276)
445 4fgs_A Probable dehydrogenase 29.1 36 0.0012 21.8 2.3 20 13-32 141-160 (273)
446 3ofk_A Nodulation protein S; N 28.9 28 0.00097 20.6 1.7 20 12-31 135-154 (216)
447 2fhp_A Methylase, putative; al 28.9 40 0.0014 19.2 2.4 17 18-34 141-157 (187)
448 2g5c_A Prephenate dehydrogenas 28.8 63 0.0021 20.2 3.4 32 1-32 63-97 (281)
449 2ekl_A D-3-phosphoglycerate de 28.7 36 0.0012 22.2 2.3 32 1-32 197-233 (313)
450 1vlm_A SAM-dependent methyltra 28.6 34 0.0012 20.4 2.1 22 12-33 120-141 (219)
451 3ny7_A YCHM protein, sulfate t 28.6 74 0.0025 17.1 3.4 8 23-30 44-51 (118)
452 3tma_A Methyltransferase; thum 28.6 1E+02 0.0035 20.1 4.5 21 12-32 298-318 (354)
453 3g2m_A PCZA361.24; SAM-depende 28.5 29 0.001 21.9 1.8 23 12-34 171-193 (299)
454 2qy6_A UPF0209 protein YFCK; s 28.4 28 0.00095 22.0 1.7 21 11-31 193-213 (257)
455 3a27_A TYW2, uncharacterized p 28.3 41 0.0014 21.2 2.5 22 11-32 199-220 (272)
456 1x19_A CRTF-related protein; m 28.2 46 0.0016 21.7 2.8 21 12-32 276-296 (359)
457 3k6r_A Putative transferase PH 28.1 43 0.0015 21.5 2.5 21 12-32 206-226 (278)
458 2avn_A Ubiquinone/menaquinone 28.0 35 0.0012 21.1 2.1 20 12-31 133-152 (260)
459 3bkx_A SAM-dependent methyltra 27.8 1.1E+02 0.0037 18.8 4.4 33 1-33 123-161 (275)
460 3iv6_A Putative Zn-dependent a 27.5 78 0.0027 20.0 3.6 17 13-30 131-147 (261)
461 2b3t_A Protein methyltransfera 27.3 49 0.0017 20.6 2.7 18 13-30 220-237 (276)
462 3q87_B N6 adenine specific DNA 27.0 93 0.0032 17.7 4.4 19 12-31 105-123 (170)
463 3mwd_B ATP-citrate synthase; A 26.7 84 0.0029 20.9 3.8 24 1-24 80-103 (334)
464 2ixa_A Alpha-N-acetylgalactosa 26.5 76 0.0026 21.6 3.7 69 1-73 92-169 (444)
465 3m2t_A Probable dehydrogenase; 26.4 68 0.0023 21.1 3.4 69 1-73 69-146 (359)
466 3u5t_A 3-oxoacyl-[acyl-carrier 26.3 43 0.0015 20.9 2.3 19 14-32 144-162 (267)
467 1dxy_A D-2-hydroxyisocaproate 26.3 60 0.002 21.3 3.0 32 1-32 198-234 (333)
468 1fp2_A Isoflavone O-methyltran 26.1 85 0.0029 20.4 3.8 21 12-32 266-289 (352)
469 1hyh_A L-hicdh, L-2-hydroxyiso 25.9 96 0.0033 19.9 3.9 12 1-12 70-81 (309)
470 3r6d_A NAD-dependent epimerase 25.9 1.1E+02 0.0036 18.1 4.0 33 1-33 74-109 (221)
471 3ggo_A Prephenate dehydrogenas 25.5 93 0.0032 20.1 3.8 32 1-32 95-129 (314)
472 1y8c_A S-adenosylmethionine-de 25.5 34 0.0012 20.5 1.7 18 13-30 124-141 (246)
473 3tl2_A Malate dehydrogenase; c 25.4 80 0.0027 20.6 3.5 34 1-34 79-130 (315)
474 2yv2_A Succinyl-COA synthetase 25.4 91 0.0031 20.1 3.7 26 1-26 72-97 (297)
475 3jwg_A HEN1, methyltransferase 25.3 56 0.0019 19.3 2.6 19 12-30 122-140 (219)
476 3gwz_A MMCR; methyltransferase 25.2 50 0.0017 21.7 2.6 20 13-32 289-308 (369)
477 1wzn_A SAM-dependent methyltra 25.1 38 0.0013 20.6 1.8 18 12-29 126-143 (252)
478 2v6b_A L-LDH, L-lactate dehydr 25.0 96 0.0033 19.9 3.8 33 1-33 68-118 (304)
479 3d64_A Adenosylhomocysteinase; 24.9 38 0.0013 23.8 2.0 33 1-33 333-366 (494)
480 3c0k_A UPF0064 protein YCCW; P 24.9 75 0.0026 21.2 3.4 22 12-33 320-341 (396)
481 4fsd_A Arsenic methyltransfera 24.9 41 0.0014 22.4 2.1 21 12-32 184-204 (383)
482 2yv1_A Succinyl-COA ligase [AD 24.7 67 0.0023 20.7 3.0 26 1-26 71-96 (294)
483 3qha_A Putative oxidoreductase 24.5 1E+02 0.0035 19.5 3.9 31 1-31 71-105 (296)
484 2fpo_A Methylase YHHF; structu 24.4 49 0.0017 19.6 2.2 21 13-33 140-162 (202)
485 2km1_A Protein DRE2; yeast, an 24.4 39 0.0013 19.4 1.7 19 11-29 78-96 (136)
486 3mcz_A O-methyltransferase; ad 23.9 45 0.0015 21.6 2.1 21 12-32 268-288 (352)
487 3dhn_A NAD-dependent epimerase 23.7 1.1E+02 0.0038 18.0 3.8 25 83-107 192-216 (227)
488 3gvx_A Glycerate dehydrogenase 23.7 61 0.0021 21.0 2.6 31 1-31 174-209 (290)
489 4h3v_A Oxidoreductase domain p 23.4 97 0.0033 20.2 3.7 69 1-73 76-156 (390)
490 3ip3_A Oxidoreductase, putativ 23.4 85 0.0029 20.3 3.4 69 1-73 68-147 (337)
491 2dkn_A 3-alpha-hydroxysteroid 23.0 1.2E+02 0.0041 18.2 3.9 16 83-98 215-230 (255)
492 2g76_A 3-PGDH, D-3-phosphoglyc 23.0 57 0.002 21.5 2.5 32 1-32 220-256 (335)
493 2h7i_A Enoyl-[acyl-carrier-pro 23.0 57 0.002 20.2 2.4 17 83-99 233-249 (269)
494 1j4a_A D-LDH, D-lactate dehydr 22.9 75 0.0026 20.8 3.0 32 1-32 200-236 (333)
495 1fp1_D Isoliquiritigenin 2'-O- 22.8 45 0.0015 21.9 2.0 20 12-31 287-306 (372)
496 1v8b_A Adenosylhomocysteinase; 22.4 47 0.0016 23.3 2.0 33 1-33 313-346 (479)
497 3kr9_A SAM-dependent methyltra 22.2 1.2E+02 0.0042 18.7 3.7 33 1-33 85-121 (225)
498 3e48_A Putative nucleoside-dip 21.9 1.3E+02 0.0045 18.5 4.0 34 1-34 66-108 (289)
499 1yt5_A Inorganic polyphosphate 21.8 62 0.0021 20.3 2.4 22 1-23 42-63 (258)
500 2r3s_A Uncharacterized protein 21.8 52 0.0018 21.0 2.1 22 12-33 252-273 (335)
No 1
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=99.85 E-value=1.5e-20 Score=125.58 Aligned_cols=112 Identities=67% Similarity=1.114 Sum_probs=99.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccCCCHHHHHHHHHcCCCCCcccee
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYVNDYPDALEMVASGKCPVRKLIT 80 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (112)
+|++|||+|.+.++..++++++++|+++.+|....+.++++..++.+++++.|++.+..+++++++++.+|++++.++++
T Consensus 241 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~ 320 (352)
T 1e3j_A 241 PNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVKQLVT 320 (352)
T ss_dssp CSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGGEE
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcCCCChHHhee
Confidence 69999999998889999999999999999997655667778889999999999987778899999999999998888999
Q ss_pred eeeCcccHHHHHHHHhcCCCCceEEEEeeCCC
Q psy12355 81 HNFKLEEAVEAFKTASKKADDTIKIMIHCRQG 112 (112)
Q Consensus 81 ~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~~ 112 (112)
++|||+++++||+.+.+++...+|+|+.++++
T Consensus 321 ~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~~ 352 (352)
T 1e3j_A 321 HSFKLEQTVDAFEAARKKADNTIKVMISCRQG 352 (352)
T ss_dssp EEEEGGGHHHHHHHHHHCCTTCSEEEEECCC-
T ss_pred EEecHHHHHHHHHHHhcCCCCceEEEEecCCC
Confidence 99999999999999998862249999998865
No 2
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=99.85 E-value=1.1e-20 Score=126.69 Aligned_cols=111 Identities=32% Similarity=0.630 Sum_probs=100.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccCCCHHHHHHHHHcCCCCCcccee
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYVNDYPDALEMVASGKCPVRKLIT 80 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (112)
+|++|||+|.+.++..++++++++|+++.+|.......++...++.+++++.+++.+.++++++++++++|++++.++++
T Consensus 253 ~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~ 332 (363)
T 3m6i_A 253 PAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVT 332 (363)
T ss_dssp CSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHHHHHHHTTSSCCGGGEE
T ss_pred CCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHHHHHHHHhCCCChHHcee
Confidence 69999999998889999999999999999998777677888889999999999987788999999999999999999999
Q ss_pred eeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 81 HNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 81 ~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
++|||+++++||+.+.+++...+|+|+..++
T Consensus 333 ~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 363 (363)
T 3m6i_A 333 HRFPLEDALKAFETASDPKTGAIKVQIQSLE 363 (363)
T ss_dssp EEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred eeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence 9999999999999999873345999998763
No 3
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=99.85 E-value=2.8e-20 Score=124.47 Aligned_cols=109 Identities=42% Similarity=0.730 Sum_probs=98.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccCCCHHHHHHHHHcCCCCCcccee
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYVNDYPDALEMVASGKCPVRKLIT 80 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (112)
+|++|||+|.+.++..++++++++|+++.+|....+.++++..++.+++++.|++.+..+++++++++.+|++++.++++
T Consensus 243 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~ 322 (356)
T 1pl8_A 243 PEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVT 322 (356)
T ss_dssp CSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGGEE
T ss_pred CCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCCCChHHheE
Confidence 69999999998889999999999999999998655667788889999999999987778899999999999998888999
Q ss_pred eeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 81 HNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 81 ~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
++|||+++++||+.+.++. .+|+|+.+++
T Consensus 323 ~~~~l~~~~~A~~~~~~~~--~gKvvi~~~~ 351 (356)
T 1pl8_A 323 HRFPLEKALEAFETFKKGL--GLKIMLKCDP 351 (356)
T ss_dssp EEEEGGGHHHHHHHHHTTC--CSEEEEECCT
T ss_pred EEecHHHHHHHHHHHhCCC--ceEEEEeCCC
Confidence 9999999999999998873 4999999865
No 4
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=99.84 E-value=1.1e-20 Score=127.08 Aligned_cols=110 Identities=17% Similarity=0.341 Sum_probs=98.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC--ccccChhhhhhcCeeEEeEeccCCCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ--MVSVPLVNACAKEIDILSCFRYVNDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++|||+|.+.++.+++++++++|+++.+|.... +.+++...++.+++++.|++.+..+++++++++++|++++.++
T Consensus 254 ~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~ 333 (370)
T 4ej6_A 254 VDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIEIDRM 333 (370)
T ss_dssp EEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTTCSCCGGG
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcCCCChhHc
Confidence 58999999988889999999999999999997654 5678888899999999999988888999999999999999999
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
++++|||+++++||+.+.+++...+|++++++
T Consensus 334 i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~ 365 (370)
T 4ej6_A 334 ISRRISLDEAPDVISNPAAAGEVKVLVIPSAE 365 (370)
T ss_dssp EEEEECGGGHHHHHHSCCCTTCSEEEECCC--
T ss_pred EEEEEEHHHHHHHHHHHHcCCCCeEEEEEccc
Confidence 99999999999999999888754588888774
No 5
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=99.82 E-value=6.3e-20 Score=122.13 Aligned_cols=108 Identities=19% Similarity=0.284 Sum_probs=94.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCcc---ccChhhhhhcCeeEEeEeccC------CCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMV---SVPLVNACAKEIDILSCFRYV------NDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~---~~~~~~~~~~~~~l~g~~~~~------~~~~~~~~~~~~g 71 (112)
+|+++||+|.+.++.+++++++++|+++.+|....+. .+++..++.|++++.|++... ++++++++++++|
T Consensus 230 ~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g 309 (346)
T 4a2c_A 230 NQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER 309 (346)
T ss_dssp SEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTT
T ss_pred cccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcC
Confidence 5899999999999999999999999999999876543 345567889999999987421 4689999999999
Q ss_pred CCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 72 KCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 72 ~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+++++++++++|||+|+++||+.+++++. .+|+||.+
T Consensus 310 ~l~~~~lI~~~~~l~~~~~A~~~l~~~~~-~GKvVl~P 346 (346)
T 4a2c_A 310 KLSLEPLIAHRGSFESFAQAVRDIARNAM-PGKVLLIP 346 (346)
T ss_dssp CSCCGGGEEEEECHHHHHHHHHHHTTSCC-CSEEEECC
T ss_pred CCCCCccEeEEEeHHHHHHHHHHHHcCCC-ceEEEEEC
Confidence 99999999999999999999999998884 59999864
No 6
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=99.81 E-value=1.3e-19 Score=120.76 Aligned_cols=108 Identities=19% Similarity=0.304 Sum_probs=97.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccCh-hhhhhcCeeEEeEecc--CCCHHHHHHHHHcCCCCCcc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPL-VNACAKEIDILSCFRY--VNDYPDALEMVASGKCPVRK 77 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~-~~~~~~~~~l~g~~~~--~~~~~~~~~~~~~g~~~~~~ 77 (112)
+|++|||+|.+.++..++++++++|+++.+|.+.++.+++. ..++.+++++.|++.+ ..+++++++++.+|++++.+
T Consensus 232 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~~ 311 (343)
T 2dq4_A 232 VEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSP 311 (343)
T ss_dssp EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCGG
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChHH
Confidence 58999999998889999999999999999998766677888 7889999999998765 37899999999999988888
Q ss_pred ceeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 78 LITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 78 ~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
+++++|||+|+++||+.+.+++ . +|+|+.++
T Consensus 312 ~i~~~~~l~~~~~A~~~~~~~~-~-gKvv~~~~ 342 (343)
T 2dq4_A 312 LLTHRLPLSRYREAFGLLASGQ-A-VKVILDPK 342 (343)
T ss_dssp GEEEEEEGGGHHHHHHHHHHSS-C-SEEEEETT
T ss_pred heeEEecHHHHHHHHHHHhcCC-c-eEEEEeeC
Confidence 9999999999999999999887 4 99999875
No 7
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=99.81 E-value=2.2e-19 Score=119.56 Aligned_cols=107 Identities=14% Similarity=0.134 Sum_probs=95.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccce
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKLI 79 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~~ 79 (112)
+|+++|++|++.++.+++++++++|+++.+|.+....+++...++.+++++.|++.+. .+++++++++++|++++ +
T Consensus 233 ~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p---~ 309 (348)
T 4eez_A 233 VQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKP---I 309 (348)
T ss_dssp EEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCC---C
T ss_pred ceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEE---E
Confidence 4789999999999999999999999999999888778888899999999999998765 78999999999998864 3
Q ss_pred eeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 80 THNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 80 ~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+++|||+|+++||+.+++++. .+|+||++++
T Consensus 310 ~~~~~l~~~~~A~~~l~~g~~-~GKvVl~~sk 340 (348)
T 4eez_A 310 VATRKLEEINDIIDEMKAGKI-EGRMVIDFTK 340 (348)
T ss_dssp EEEECGGGHHHHHHHHHTTCC-SSEEEEECC-
T ss_pred EEEEeHHHHHHHHHHHHCCCC-ccEEEEEccc
Confidence 478999999999999999984 4899999863
No 8
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=99.79 E-value=1e-18 Score=117.63 Aligned_cols=106 Identities=22% Similarity=0.329 Sum_probs=92.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCC-cEEEEEecCCCccccChhhhhhcCeeEEeEecc----CCCHHHHHHHHHcCCCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMG-GKLMLVGMGPQMVSVPLVNACAKEIDILSCFRY----VNDYPDALEMVASGKCPV 75 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~~~~~g~~~~ 75 (112)
+|++|||+|.+.++.+++++++++ |+++.+|.+..+.+++...++.++ ++.|++.. .++++++++++.+|++++
T Consensus 266 ~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~ 344 (376)
T 1e3i_A 266 VDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDL 344 (376)
T ss_dssp BSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCG
T ss_pred ccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCc
Confidence 599999999988899999999999 999999985556677777888888 99998643 267899999999999998
Q ss_pred ccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 76 RKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 76 ~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
.++++++|||+|+++||+.+.+++. +|+|+.+
T Consensus 345 ~~~i~~~~~l~~~~~A~~~~~~~~~--~Kvvi~~ 376 (376)
T 1e3i_A 345 DLLVTHALPFESINDAIDLMKEGKS--IRTILTF 376 (376)
T ss_dssp GGGEEEEEEGGGHHHHHHHHHTTCC--SEEEEEC
T ss_pred HHhEeeeecHHHHHHHHHHHhcCCc--ceEEEeC
Confidence 8899999999999999999988774 8999875
No 9
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=99.78 E-value=6.7e-19 Score=117.59 Aligned_cols=110 Identities=16% Similarity=0.160 Sum_probs=92.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCc--cccChh--hhhhcCeeEEeEeccC--CCHHHHHHHHHcCCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQM--VSVPLV--NACAKEIDILSCFRYV--NDYPDALEMVASGKCP 74 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~--~~~~~~--~~~~~~~~l~g~~~~~--~~~~~~~~~~~~g~~~ 74 (112)
+|++|||+|.+.++..++++++++|+++.+|..... .+++.. .+..+++++.+++... .+++++++++++|+++
T Consensus 236 ~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~ 315 (352)
T 3fpc_A 236 VDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVD 315 (352)
T ss_dssp EEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcCCCC
Confidence 589999999988899999999999999999976543 333332 2446889999987643 6799999999999999
Q ss_pred CccceeeeeC-cccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 75 VRKLITHNFK-LEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 75 ~~~~~~~~~~-l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
+.++++++|+ |+|+++||+.+.+++...+|+|+.++
T Consensus 316 ~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~ 352 (352)
T 3fpc_A 316 PSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA 352 (352)
T ss_dssp GGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred hhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence 9999999999 99999999999987755589999863
No 10
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=99.78 E-value=8.9e-19 Score=116.85 Aligned_cols=108 Identities=21% Similarity=0.344 Sum_probs=94.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccCh-hhhhhcCeeEEeEecc--CCCHHHHHHHHHcCCCCCcc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPL-VNACAKEIDILSCFRY--VNDYPDALEMVASGKCPVRK 77 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~-~~~~~~~~~l~g~~~~--~~~~~~~~~~~~~g~~~~~~ 77 (112)
+|++|||+|.+.++.+++++++++|+++.+|....+..++. ..++.+++++.|++.. ..+++++++++++|++++.+
T Consensus 237 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~ 316 (348)
T 2d8a_A 237 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDP 316 (348)
T ss_dssp EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCCCTT
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCChHH
Confidence 58999999988889999999999999999998766667777 7788999999998753 36799999999999998888
Q ss_pred ceeeeeC-cccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 78 LITHNFK-LEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 78 ~~~~~~~-l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
+++++|| |+|+++||+.+.++. .+|+|+.++
T Consensus 317 ~i~~~~~gl~~~~~A~~~~~~~~--~gKvvi~~~ 348 (348)
T 2d8a_A 317 IITHKYKGFDKYEEAFELMRAGK--TGKVVFMLK 348 (348)
T ss_dssp TEEEEEESSTTHHHHHHHHHTTC--CSEEEEEC-
T ss_pred hheeeCCCHHHHHHHHHHHhCCC--ceEEEEeeC
Confidence 9999999 999999999997743 499999864
No 11
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=99.78 E-value=2e-18 Score=116.29 Aligned_cols=108 Identities=16% Similarity=0.199 Sum_probs=92.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCC-cEEEEEecCCC--ccccChhhhhhcCeeEEeEecc----CCCHHHHHHHHHcCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMG-GKLMLVGMGPQ--MVSVPLVNACAKEIDILSCFRY----VNDYPDALEMVASGKC 73 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~~~~~g~~ 73 (112)
+|++|||+|.+.++.+++++++++ |+++.+|.... ..+++...++. ++++.|++.. ..+++++++++++|++
T Consensus 264 ~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l 342 (378)
T 3uko_A 264 VDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRTQVPWLVEKYMNKEI 342 (378)
T ss_dssp BSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEEEECSGGGCCHHHHHHHHHHHHHTTSS
T ss_pred CCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-CcEEEEEEecCCCchHHHHHHHHHHHcCCC
Confidence 699999999988899999999996 99999997653 45566665554 8899998743 2679999999999999
Q ss_pred CCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 74 PVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 74 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
++.++++++|||+++++||+.+.+++. .|+|+.+++
T Consensus 343 ~~~~~i~~~~~l~~~~~A~~~~~~g~~--~Kvvi~~~~ 378 (378)
T 3uko_A 343 KVDEYITHNLTLGEINKAFDLLHEGTC--LRCVLDTSK 378 (378)
T ss_dssp CCGGGEEEEEEGGGHHHHHHHTTCTTC--SEEEEETTC
T ss_pred ChhHheeeEeeHHHHHHHHHHHHCCCc--eEEEEecCC
Confidence 999999999999999999999998874 699999874
No 12
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=99.77 E-value=8.7e-19 Score=116.90 Aligned_cols=107 Identities=9% Similarity=0.148 Sum_probs=94.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC-Cccc-cChhhhh-hcCeeEEeEeccC-CCHHHHHHHHHcCCCCCc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP-QMVS-VPLVNAC-AKEIDILSCFRYV-NDYPDALEMVASGKCPVR 76 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~-~~~~~~~-~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~ 76 (112)
+|++|||+|.+.++.+++++++++|+++.+|.+. .+.+ ++...++ .+++++.|++.+. .+++++++++++|++++
T Consensus 235 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~- 313 (348)
T 3two_A 235 LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIYP- 313 (348)
T ss_dssp EEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCCC-
T ss_pred CCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCCc-
Confidence 5899999998868999999999999999999877 5555 7777777 9999999998766 78999999999999876
Q ss_pred cceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 77 KLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 77 ~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
. +++|||+++++||+.+.+++. .+|+|+.+++
T Consensus 314 -~-~~~~~l~~~~~A~~~~~~~~~-~gKvVi~~~~ 345 (348)
T 3two_A 314 -E-IDLILGKDIDTAYHNLTHGKA-KFRYVIDMKK 345 (348)
T ss_dssp -C-EEEECGGGHHHHHHHHHTTCC-CSEEEEEGGG
T ss_pred -e-EEEEEHHHHHHHHHHHHcCCC-ceEEEEecCC
Confidence 2 479999999999999999884 5899999865
No 13
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=99.77 E-value=2.2e-18 Score=114.59 Aligned_cols=107 Identities=17% Similarity=0.282 Sum_probs=95.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccce
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKLI 79 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~~ 79 (112)
+|++||++|.+.++..++++++++|+++.+|.+.++.+++...++.+++++.|++.+. ++++++++++++|++++ +
T Consensus 233 ~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~---~ 309 (340)
T 3s2e_A 233 AHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKA---T 309 (340)
T ss_dssp EEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCC---C
T ss_pred CCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCc---e
Confidence 4899999999999999999999999999999877777788888999999999998765 78999999999999876 3
Q ss_pred eeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 80 THNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 80 ~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+++++|+++++||+.+.+++. .+|+|+.+++
T Consensus 310 ~~~~~l~~~~~A~~~~~~~~~-~Gkvvv~~~~ 340 (340)
T 3s2e_A 310 VSTAKLDDVNDVFGRLREGKV-EGRVVLDFSR 340 (340)
T ss_dssp EEEECGGGHHHHHHHHHTTCC-CSEEEEECCC
T ss_pred EEEEeHHHHHHHHHHHHcCCC-ceEEEEecCC
Confidence 567899999999999999884 5999999864
No 14
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=99.77 E-value=6.1e-18 Score=113.72 Aligned_cols=106 Identities=11% Similarity=0.163 Sum_probs=91.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCC-cEEEEEecCCC--ccccChhhhhhcCeeEEeEecc--C-CCHHHHHHHHHcCCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMG-GKLMLVGMGPQ--MVSVPLVNACAKEIDILSCFRY--V-NDYPDALEMVASGKCP 74 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~l~g~~~~--~-~~~~~~~~~~~~g~~~ 74 (112)
+|++|||+|.+.++..++++++++ |+++.+|.+.. +.+++...++.++ ++.|++.. . ++++++++++.+|+++
T Consensus 262 ~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~l~~~g~i~ 340 (373)
T 1p0f_A 262 VDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVFGGFKGEEVSRLVDDYMKKKIN 340 (373)
T ss_dssp BSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSGGGCCGGGHHHHHHHHHTTSSC
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEeeccCCcCHHHHHHHHHHHHcCCCC
Confidence 599999999888899999999999 99999997653 4567777777788 99998642 2 6899999999999999
Q ss_pred CccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 75 VRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 75 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+.++++++|||+|+++||+.+.+++. +|+|+.+
T Consensus 341 ~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvi~~ 373 (373)
T 1p0f_A 341 VNFLVSTKLTLDQINKAFELLSSGQG--VRSIMIY 373 (373)
T ss_dssp GGGGEEEEECGGGHHHHHHHTTTSSC--SEEEEEC
T ss_pred chheEEEEeeHHHHHHHHHHHHCCCc--ceEEEeC
Confidence 88899999999999999999988774 8999874
No 15
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=99.77 E-value=2.3e-18 Score=114.52 Aligned_cols=108 Identities=19% Similarity=0.293 Sum_probs=94.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccce
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKLI 79 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~~ 79 (112)
+|++|||+|.+.++..++++++++|+++.+|.+.++.+++...++.+++++.|++... ++++++++++.+|++++.
T Consensus 231 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--- 307 (339)
T 1rjw_A 231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTI--- 307 (339)
T ss_dssp EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCC---
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCcc---
Confidence 5899999998888999999999999999999877666777778889999999987655 789999999999988763
Q ss_pred eeeeCcccHHHHHHHHhcCCCCceEEEEeeCCC
Q psy12355 80 THNFKLEEAVEAFKTASKKADDTIKIMIHCRQG 112 (112)
Q Consensus 80 ~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~~ 112 (112)
+++|||+++++||+.+.+++. .+|+|+.++++
T Consensus 308 ~~~~~l~~~~~A~~~~~~~~~-~gKvvi~~~~~ 339 (339)
T 1rjw_A 308 IEVQPLEKINEVFDRMLKGQI-NGRVVLTLEDK 339 (339)
T ss_dssp EEEEEGGGHHHHHHHHHTTCC-SSEEEEECCCC
T ss_pred EEEEcHHHHHHHHHHHHcCCC-ceEEEEecCCC
Confidence 578999999999999998873 59999998763
No 16
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=99.77 E-value=3.8e-18 Score=114.76 Aligned_cols=106 Identities=17% Similarity=0.203 Sum_probs=92.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCC-cEEEEEecCCC-ccccChhhhhhcCeeEEeEecc----CCCHHHHHHHHHcCCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMG-GKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRY----VNDYPDALEMVASGKCP 74 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~~~~~g~~~ 74 (112)
+|++|||+|.+.++..++++++++ |+++.+|.+.. +.+++...++.++ ++.|++.. ..+++++++++.+|+++
T Consensus 263 ~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~ 341 (374)
T 1cdo_A 263 VDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVK 341 (374)
T ss_dssp BSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSC
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEecCCCCcHHHHHHHHHHHHcCCCC
Confidence 599999999888899999999999 99999998664 5667777788888 99998643 25789999999999999
Q ss_pred CccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 75 VRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 75 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+.++++++|||+|+++||+.+.+++. +|+|+.+
T Consensus 342 ~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvi~~ 374 (374)
T 1cdo_A 342 LDEFITHRMPLESVNDAIDLMKHGKC--IRTVLSL 374 (374)
T ss_dssp CGGGEEEEEEGGGHHHHHHHHHTTCC--SEEEEEC
T ss_pred hHHheeeEecHHHHHHHHHHHHCCCe--eEEEEeC
Confidence 88899999999999999999998874 8999875
No 17
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=99.77 E-value=4e-18 Score=114.65 Aligned_cols=106 Identities=15% Similarity=0.237 Sum_probs=92.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCC-cEEEEEecCCC--ccccChhhhhhcCeeEEeEecc----CCCHHHHHHHHHcCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMG-GKLMLVGMGPQ--MVSVPLVNACAKEIDILSCFRY----VNDYPDALEMVASGKC 73 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~~~~~g~~ 73 (112)
+|++|||+|.+.++..++++++++ |+++.+|.... ..+++...++.++ ++.|++.. .++++++++++.+|++
T Consensus 262 ~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i 340 (374)
T 2jhf_A 262 VDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIFGGFKSKDSVPKLVADFMAKKF 340 (374)
T ss_dssp BSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSS
T ss_pred CcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEeccCCCChHHHHHHHHHHHHcCCC
Confidence 599999999988899999999999 99999997653 4567777788888 99998643 2578999999999999
Q ss_pred CCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 74 PVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 74 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++.++++++|||+|+++||+.+.+++. +|+|+.+
T Consensus 341 ~~~~~i~~~~~l~~~~~A~~~~~~~~~--~Kvvi~~ 374 (374)
T 2jhf_A 341 ALDPLITHVLPFEKINEGFDLLRSGES--IRTILTF 374 (374)
T ss_dssp CCGGGEEEEEEGGGHHHHHHHHHTTCC--SEEEEEC
T ss_pred CchhheEEEEeHHHHHHHHHHHHCCCc--ceEEEeC
Confidence 988899999999999999999988774 8999875
No 18
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=99.77 E-value=2.1e-18 Score=115.89 Aligned_cols=107 Identities=19% Similarity=0.292 Sum_probs=93.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC--ccccChhhhhhcCeeEEeEeccC----CCHHHHHHHHHcCCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ--MVSVPLVNACAKEIDILSCFRYV----NDYPDALEMVASGKCP 74 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~~~~~~~~~~l~g~~~~~----~~~~~~~~~~~~g~~~ 74 (112)
+|++|||+|.+.++..++++++++|+++.+|.... +.++++..++.+++++.|++... .+++++++++.+|+++
T Consensus 259 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~ 338 (371)
T 1f8f_A 259 VNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFP 338 (371)
T ss_dssp EEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCC
T ss_pred CcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCC
Confidence 58999999988889999999999999999997653 45677778889999999987532 5789999999999999
Q ss_pred CccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 75 VRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 75 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
+.+++++ |||+|+++||+.+.+++. +|+|+.+.
T Consensus 339 ~~~~i~~-~~l~~~~~A~~~~~~~~~--~Kvvv~~~ 371 (371)
T 1f8f_A 339 FDQLVKF-YAFDEINQAAIDSRKGIT--LKPIIKIA 371 (371)
T ss_dssp GGGGEEE-EEGGGHHHHHHHHHHTSC--SEEEEECC
T ss_pred cccceeE-ecHHHHHHHHHHHHCCCc--eEEEEeeC
Confidence 8888988 999999999999998874 89999763
No 19
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=99.77 E-value=1.8e-18 Score=115.25 Aligned_cols=104 Identities=13% Similarity=0.223 Sum_probs=92.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++|||+|.+.++.+++++++++|+++.+|.... ..+++. .++.+++++.++..+. ++++++++++++|++++
T Consensus 240 ~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~--- 315 (345)
T 3jv7_A 240 ATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALARAGRLDI--- 315 (345)
T ss_dssp EEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHHHHHTTCCCC---
T ss_pred CeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCce---
Confidence 58999999998889999999999999999998765 667775 7889999999998765 78999999999999876
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++++|+|+++++||+.+.+++. .+|+|+.+
T Consensus 316 ~~~~~~l~~~~~A~~~~~~~~~-~Gkvvv~p 345 (345)
T 3jv7_A 316 HTETFTLDEGPAAYRRLREGSI-RGRGVVVP 345 (345)
T ss_dssp CEEEECSTTHHHHHHHHHHTCC-SSEEEECC
T ss_pred EEEEEcHHHHHHHHHHHHcCCC-ceeEEeCC
Confidence 4689999999999999999984 59999864
No 20
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=99.76 E-value=4.8e-18 Score=114.16 Aligned_cols=106 Identities=16% Similarity=0.258 Sum_probs=92.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCC-cEEEEEecCCC--ccccChhhhhhcCeeEEeEecc----CCCHHHHHHHHHcCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMG-GKLMLVGMGPQ--MVSVPLVNACAKEIDILSCFRY----VNDYPDALEMVASGKC 73 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~~~~~g~~ 73 (112)
+|++|||+|.+.++..++++++++ |+++.+|.... +.+++...++.++ ++.|++.. ..+++++++++.+|++
T Consensus 261 ~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l 339 (373)
T 2fzw_A 261 VDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFGGWKSVESVPKLVSEYMSKKI 339 (373)
T ss_dssp BSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSS
T ss_pred CCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccCCCCcHHHHHHHHHHHHcCCC
Confidence 599999999988899999999999 99999997653 4567777788888 99998643 2578999999999999
Q ss_pred CCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 74 PVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 74 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++.++++++|||+++++||+.+.+++. +|+|+.+
T Consensus 340 ~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvi~~ 373 (373)
T 2fzw_A 340 KVDEFVTHNLSFDEINKAFELMHSGKS--IRTVVKI 373 (373)
T ss_dssp CSGGGEEEEEEGGGHHHHHHHHHHTCC--SEEEEEC
T ss_pred CchheEeEEeeHHHHHHHHHHHhCCCc--ceEEEeC
Confidence 988899999999999999999998874 8999874
No 21
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=99.75 E-value=1.4e-18 Score=117.82 Aligned_cols=109 Identities=18% Similarity=0.230 Sum_probs=93.2
Q ss_pred CcEEEEcccChH--------------HHHHHHhhccCCcEEEEEecCC-------------CccccChhhhhhcCeeEEe
Q psy12355 1 MMLYLDPLGTEN--------------CLTLGINVTKMGGKLMLVGMGP-------------QMVSVPLVNACAKEIDILS 53 (112)
Q Consensus 1 ~D~v~d~~g~~~--------------~~~~~~~~l~~~G~iv~~g~~~-------------~~~~~~~~~~~~~~~~l~g 53 (112)
+|++|||+|.+. ++.+++++++++|+++.+|... .+.++++..++.+++++.+
T Consensus 255 ~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g 334 (398)
T 2dph_A 255 VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMT 334 (398)
T ss_dssp EEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEEC
T ss_pred CCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEE
Confidence 589999998753 6899999999999999999762 2345677778899999998
Q ss_pred EeccC-CCHHHHHHHHHcCCCC--CccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 54 CFRYV-NDYPDALEMVASGKCP--VRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 54 ~~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+.... ..++++++++.+|+++ +.++++++|+|+++++||+.+.+++ . +|+|+.++.
T Consensus 335 ~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~-gKvvv~~~~ 393 (398)
T 2dph_A 335 GMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGS-P-AKFVIDPHG 393 (398)
T ss_dssp SSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTC-S-CEEEECTTS
T ss_pred eccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCC-c-eEEEEecCc
Confidence 76544 7899999999999998 7778899999999999999999887 4 999998753
No 22
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=99.75 E-value=2.5e-18 Score=114.51 Aligned_cols=105 Identities=22% Similarity=0.229 Sum_probs=77.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccce
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKLI 79 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~~ 79 (112)
+|++|||+|.+.++..++++++++|+++.+|.+.++.+++...++.+++++.|++... ++++++++++.+|++++ .+
T Consensus 239 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~--~i 316 (344)
T 2h6e_A 239 ASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKP--YI 316 (344)
T ss_dssp EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCC--CE
T ss_pred ccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHcCCCCc--ce
Confidence 5899999999878999999999999999999876666778888889999999988654 78999999999998865 46
Q ss_pred eeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 80 THNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 80 ~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++|||+|+++||+.+.+++. .+|+|+.+
T Consensus 317 -~~~~l~~~~~A~~~~~~~~~-~gKvvl~~ 344 (344)
T 2h6e_A 317 -IKVPLDDINKAFTNLDEGRV-DGRQVITP 344 (344)
T ss_dssp -EEECC-----------------CEEEECC
T ss_pred -EEEeHHHHHHHHHHHHcCCC-ceEEEEeC
Confidence 89999999999999988873 49999864
No 23
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=99.74 E-value=5.4e-18 Score=113.04 Aligned_cols=105 Identities=20% Similarity=0.221 Sum_probs=92.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC-CccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP-QMVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++||++|.+.++..++++++++|+++.+|.+. ++ ++++..++.+++++.|++.+. ++++++++++.+|+++ ++
T Consensus 241 ~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~~ 317 (347)
T 1jvb_A 241 VDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVK--PM 317 (347)
T ss_dssp EEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHTTSSC--CC
T ss_pred ceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHcCCCC--ce
Confidence 5899999998878999999999999999999866 55 777778889999999988655 7899999999999875 46
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++++|||+++++||+.+.+++. .+|+|+.+
T Consensus 318 i~~~~~l~~~~~A~~~~~~~~~-~gKvvl~~ 347 (347)
T 1jvb_A 318 ITKTMKLEEANEAIDNLENFKA-IGRQVLIP 347 (347)
T ss_dssp CEEEEEGGGHHHHHHHHHTTCC-CSEEEEEC
T ss_pred EEEEEcHHHHHHHHHHHHCCCC-cceEEecC
Confidence 8899999999999999998873 48999864
No 24
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=99.74 E-value=2.7e-18 Score=115.78 Aligned_cols=106 Identities=19% Similarity=0.272 Sum_probs=93.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC-C-ccccChhh-hhhcCeeEEeEeccC-CCHHHHHHHHHc--CCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP-Q-MVSVPLVN-ACAKEIDILSCFRYV-NDYPDALEMVAS--GKCP 74 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~-~~~~~~~~-~~~~~~~l~g~~~~~-~~~~~~~~~~~~--g~~~ 74 (112)
+|++|||+|.+.++..++++++++|+++.+|... + +.+++... ++.+++++.|++... .+++++++++++ |++
T Consensus 268 ~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~~~g~l- 346 (380)
T 1vj0_A 268 ADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLL- 346 (380)
T ss_dssp EEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCCHHHHHHHHHHHHTCHHHH-
T ss_pred CcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecCCHHHHHHHHHHHHhhcCCe-
Confidence 5899999998888999999999999999999866 5 66788877 899999999988654 789999999999 977
Q ss_pred CccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 75 VRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 75 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
.++++++|||+|+++||+.+.+++ .. |+|+.++
T Consensus 347 -~~~i~~~~~l~~~~~A~~~~~~~~-~~-Kvvl~~~ 379 (380)
T 1vj0_A 347 -SKLITHRLPLKEANKALELMESRE-AL-KVILYPE 379 (380)
T ss_dssp -GGGCCEEEEGGGHHHHHHHHHHTS-CS-CEEEECC
T ss_pred -eeEEEEEEeHHHHHHHHHHHhcCC-Cc-eEEEEeC
Confidence 567889999999999999999887 45 9999875
No 25
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.4e-17 Score=110.98 Aligned_cols=107 Identities=17% Similarity=0.197 Sum_probs=92.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++||++|.+..+..++++++++|+++.+|...+ +.++++..++.+++++.|++... .+++++++++.+|++++.
T Consensus 239 ~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~-- 316 (347)
T 2hcy_A 239 AHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSP-- 316 (347)
T ss_dssp EEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTSCCCC--
T ss_pred CCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCCCccc--
Confidence 58999999988889999999999999999998663 56777778889999999987655 789999999999988763
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+++|||+++++||+.+.+++ ..+|+|+.+++
T Consensus 317 -~~~~~l~~~~~A~~~~~~~~-~~gKvvv~~~~ 347 (347)
T 2hcy_A 317 -IKVVGLSTLPEIYEKMEKGQ-IVGRYVVDTSK 347 (347)
T ss_dssp -EEEEEGGGHHHHHHHHHTTC-CSSEEEEESCC
T ss_pred -eEEEcHHHHHHHHHHHHcCC-cceeEEEecCC
Confidence 57899999999999999887 35999998764
No 26
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=99.73 E-value=6e-18 Score=113.25 Aligned_cols=106 Identities=16% Similarity=0.208 Sum_probs=90.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccc-cChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVS-VPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~-~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++|||+|.+.++..++++++++|+++.+|....+.. ++.. ++.+++++.|++.+. .+++++++++++|++++.
T Consensus 245 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~-- 321 (357)
T 2cf5_A 245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSI-- 321 (357)
T ss_dssp EEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHHHHHHTTCCCC--
T ss_pred CCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHHHHHHHHHcCCCCCc--
Confidence 58999999987778999999999999999998665444 6666 888999999988755 789999999999988763
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+ ++|||+++++||+.+.+++. .+|+|+.+++
T Consensus 322 ~-~~~~l~~~~~A~~~~~~~~~-~gKvvi~~~~ 352 (357)
T 2cf5_A 322 I-EVVKMDYVNTAFERLEKNDV-RYRFVVDVEG 352 (357)
T ss_dssp E-EEEEGGGHHHHHHHHHTTCS-SSEEEEETTS
T ss_pred e-EEEeHHHHHHHHHHHHCCCC-ceEEEEeCCc
Confidence 4 68999999999999998873 5899998864
No 27
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=99.73 E-value=7.6e-18 Score=114.39 Aligned_cols=104 Identities=16% Similarity=0.228 Sum_probs=90.6
Q ss_pred CcEEEEcccCh-HHHHHHHhhc----cCCcEEEEEecCCCccccChhhhhhcCeeEEeEecc--CCCHHHHHHHHHcCCC
Q psy12355 1 MMLYLDPLGTE-NCLTLGINVT----KMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRY--VNDYPDALEMVASGKC 73 (112)
Q Consensus 1 ~D~v~d~~g~~-~~~~~~~~~l----~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~--~~~~~~~~~~~~~g~~ 73 (112)
+|++|||+|.+ .++..+++++ +++|+++.+|....+.+++...++.+++++.|++.+ ..+++++++++++| +
T Consensus 283 ~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ll~~g-l 361 (404)
T 3ip1_A 283 AKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-M 361 (404)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCCCCSTTHHHHHHHHHHTT-C
T ss_pred CCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecCCCchHHHHHHHHHHHcC-C
Confidence 69999999987 4677788888 999999999988777788888999999999999864 37899999999999 9
Q ss_pred CCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 74 PVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 74 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
++.++++++|+|+++++||+.+.. +|+|+.++
T Consensus 362 ~~~~~i~~~~~l~~~~~A~~~~~~-----GKvvl~~~ 393 (404)
T 3ip1_A 362 DMTKIISKTVSMEEIPEYIKRLQT-----DKSLVKVT 393 (404)
T ss_dssp CGGGGCCEEECGGGHHHHHHHTTT-----CTTCSCEE
T ss_pred ChhheEEEEeeHHHHHHHHHHHhC-----CcEEEecC
Confidence 998899999999999999999972 56676653
No 28
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=99.72 E-value=8.2e-18 Score=113.12 Aligned_cols=107 Identities=17% Similarity=0.166 Sum_probs=88.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCcc-ccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMV-SVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++|||+|.+.++..++++++++|+++.+|....+. .++...++.+++++.|++.+. ++++++++++++|++++.
T Consensus 258 ~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~-- 335 (369)
T 1uuf_A 258 FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVAD-- 335 (369)
T ss_dssp EEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCCC--
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCcc--
Confidence 5899999998777899999999999999999866544 677778889999999988655 789999999999988653
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+ ++|||+++++||+.+.+++. .+|+|+.+++
T Consensus 336 i-~~~~l~~~~~A~~~~~~~~~-~gKvvi~~~~ 366 (369)
T 1uuf_A 336 I-EMIRADQINEAYERMLRGDV-KYRFVIDNRT 366 (369)
T ss_dssp E-EEECGGGHHHHHHHHHTTCS-SSEEEEEGGG
T ss_pred e-EEEcHHHHHHHHHHHHcCCC-ceEEEEecCC
Confidence 4 57999999999999998873 5999998754
No 29
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=99.72 E-value=3.3e-18 Score=114.80 Aligned_cols=109 Identities=21% Similarity=0.226 Sum_probs=92.8
Q ss_pred CcEEEEcccChHHH-HHHHhhccCCcEEEEEecCCCc-cccChhh---hhhcCeeEEeEeccC-CCHHHHHHHHHcCCCC
Q psy12355 1 MMLYLDPLGTENCL-TLGINVTKMGGKLMLVGMGPQM-VSVPLVN---ACAKEIDILSCFRYV-NDYPDALEMVASGKCP 74 (112)
Q Consensus 1 ~D~v~d~~g~~~~~-~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~---~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~ 74 (112)
+|++|||+|.+.++ ..++++++++|+++.+|..... ..++... ++.+++++.|++.+. ++++++++++++|+++
T Consensus 247 ~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~ 326 (366)
T 2cdc_A 247 FDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTL 326 (366)
T ss_dssp EEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEEecCCCHHHHHHHHHHHHcCCCC
Confidence 58999999987778 9999999999999999986653 6677777 889999999987654 7899999999999876
Q ss_pred ----CccceeeeeCcccHHHHHHHH-hcCCCCceEEEEeeC
Q psy12355 75 ----VRKLITHNFKLEEAVEAFKTA-SKKADDTIKIMIHCR 110 (112)
Q Consensus 75 ----~~~~~~~~~~l~~~~~a~~~~-~~~~~~~~k~v~~~~ 110 (112)
+.++++++|||+++++||+.+ ..++ ..+|+|+.++
T Consensus 327 ~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~-~~gKvvi~~~ 366 (366)
T 2cdc_A 327 YPKAAKMLITKTVSINDEKELLKVLREKEH-GEIKIRILWE 366 (366)
T ss_dssp SHHHHTTSEEEEEETTCHHHHHHHHHCCCT-TCCEEEEECC
T ss_pred cccchhhcEEEEEcHHHHHHHHHHHhhhcC-CceEEEEecC
Confidence 678889999999999999994 3344 3599999864
No 30
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=99.72 E-value=1.3e-18 Score=116.36 Aligned_cols=106 Identities=16% Similarity=0.128 Sum_probs=92.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC-CccccChhhh----hhcCeeEEeEeccC-CCHHHHHHHHHcC--C
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP-QMVSVPLVNA----CAKEIDILSCFRYV-NDYPDALEMVASG--K 72 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~~~----~~~~~~l~g~~~~~-~~~~~~~~~~~~g--~ 72 (112)
+|++|||+|.+.++..++++++++|+++.+|... .+.+++...+ +.+++++.|++.+. ++++++++++++| +
T Consensus 243 ~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~~~ 322 (357)
T 2b5w_A 243 MDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKW 322 (357)
T ss_dssp EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCHHHHHHHHHHHHHSCHH
T ss_pred CCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCHHHHHHHHHHHHhCchh
Confidence 5899999999878999999999999999999876 5566777777 89999999987654 7899999999999 8
Q ss_pred CCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 73 CPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 73 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+ +.++++++|||+++++||+.+ +. .+|+|+.+++
T Consensus 323 ~-~~~~i~~~~~l~~~~~A~~~~--~~--~gKvvi~~~~ 356 (357)
T 2b5w_A 323 F-LEDLVTGVHPLSEFEAAFDDD--DT--TIKTAIEFST 356 (357)
T ss_dssp H-HHHHEEEEEEGGGGGGGGCCS--TT--CCEEEEECCC
T ss_pred h-hhhhcceeecHHHHHHHHHHh--CC--CceEEEEecC
Confidence 6 677888999999999999988 33 3999998864
No 31
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=99.72 E-value=1.1e-17 Score=112.29 Aligned_cols=104 Identities=17% Similarity=0.128 Sum_probs=91.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++|||+| ...+.+++++++++|+++.+|...+ ..+++...++.+++++.|+..+. .+++++++++.+|++ +++
T Consensus 258 ~D~vid~~g-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~ 334 (363)
T 3uog_A 258 ADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGL--KPV 334 (363)
T ss_dssp EEEEEEETT-SSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHHHHHTC--CCC
T ss_pred ceEEEECCC-hHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHHHcCCC--ccc
Confidence 589999998 4668999999999999999998765 46778888999999999998765 789999999999976 457
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++++|||+++++||+.+.+++ . +|+|+++
T Consensus 335 i~~~~~l~~~~~A~~~~~~~~-~-gKvvi~~ 363 (363)
T 3uog_A 335 IDMRYKFTEVPEALAHLDRGP-F-GKVVIEF 363 (363)
T ss_dssp EEEEEEGGGHHHHHHTGGGCC-S-BEEEEEC
T ss_pred eeeEEcHHHHHHHHHHHHcCC-C-ccEEEeC
Confidence 889999999999999999887 3 9999875
No 32
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=99.71 E-value=3.5e-17 Score=112.64 Aligned_cols=105 Identities=14% Similarity=0.176 Sum_probs=91.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++|||+|. .++.+++++++++|+++.+|...+ ..+++...++.+++++.|++... .++.++++++++|+++ ++
T Consensus 315 ~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~~ 391 (456)
T 3krt_A 315 IDIVFEHPGR-ETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIH--PT 391 (456)
T ss_dssp EEEEEECSCH-HHHHHHHHHEEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSC--CC
T ss_pred CcEEEEcCCc-hhHHHHHHHhhCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcc--cc
Confidence 5899999987 779999999999999999997664 56677788889999999998765 6788899999999886 46
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++++|||+++++|++.+.+++ ..+|+|+.+
T Consensus 392 i~~~~~l~~~~eA~~~l~~~~-~~GKvvv~~ 421 (456)
T 3krt_A 392 LSKVYSLEDTGQAAYDVHRNL-HQGKVGVLC 421 (456)
T ss_dssp EEEEEEGGGHHHHHHHHHTTC-SSSEEEEES
T ss_pred eeEEEcHHHHHHHHHHHHhCC-CCCcEEEEe
Confidence 889999999999999999988 459998876
No 33
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=99.71 E-value=1.3e-17 Score=112.00 Aligned_cols=106 Identities=15% Similarity=0.133 Sum_probs=92.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccce
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKLI 79 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~~ 79 (112)
+|++|||+|.+.++..++++++++|+++.+|....+.+++...++.+++++.|++.+. .+++++++++.+|++++. +
T Consensus 252 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--~ 329 (366)
T 1yqd_A 252 LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITAD--I 329 (366)
T ss_dssp EEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCCCC--E
T ss_pred CCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCCCc--e
Confidence 5899999998767899999999999999999876666678888899999999988655 789999999999998764 4
Q ss_pred eeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 80 THNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 80 ~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
++|||+|+++||+.+.+++. .+|+|+.++
T Consensus 330 -~~~~l~~~~~A~~~~~~~~~-~gKvvl~~~ 358 (366)
T 1yqd_A 330 -EVISTDYLNTAMERLAKNDV-RYRFVIDVG 358 (366)
T ss_dssp -EEECGGGHHHHHHHHHTTCC-SSEEEECHH
T ss_pred -EEEcHHHHHHHHHHHHcCCc-ceEEEEEcc
Confidence 68999999999999998873 599999763
No 34
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=99.71 E-value=5.4e-17 Score=108.06 Aligned_cols=105 Identities=18% Similarity=0.253 Sum_probs=90.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCc-cccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQM-VSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++||++| ..++..++++++++|+++.+|..... ..+++..++.+++++.|+.... ++++++++++.+|+++ ++
T Consensus 236 ~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~--~~ 312 (343)
T 2eih_A 236 ADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLK--PV 312 (343)
T ss_dssp EEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSC--CC
T ss_pred ceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCC--Cc
Confidence 589999998 67789999999999999999976543 3577778889999999987544 7899999999999875 46
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++++|||+++++||+.+.+++. .+|+|+.+
T Consensus 313 i~~~~~l~~~~~A~~~~~~~~~-~gKvvv~~ 342 (343)
T 2eih_A 313 VGQVLPLEAAAEGHRLLEERRV-FGKVVLQV 342 (343)
T ss_dssp EEEEEEGGGHHHHHHHHHTTCS-SSEEEEEC
T ss_pred eeEEeeHHHHHHHHHHHHcCCC-ceEEEEec
Confidence 8899999999999999998873 48999875
No 35
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=99.70 E-value=2.8e-17 Score=111.29 Aligned_cols=109 Identities=16% Similarity=0.160 Sum_probs=89.4
Q ss_pred CcEEEEcccCh---------------HHHHHHHhhccCCcEEEEEecCC-C------------ccccChhhhhhcCeeEE
Q psy12355 1 MMLYLDPLGTE---------------NCLTLGINVTKMGGKLMLVGMGP-Q------------MVSVPLVNACAKEIDIL 52 (112)
Q Consensus 1 ~D~v~d~~g~~---------------~~~~~~~~~l~~~G~iv~~g~~~-~------------~~~~~~~~~~~~~~~l~ 52 (112)
+|++|||+|.+ .++..++++++++|+++.+|.+. . ...++...++.+++++.
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFH 334 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEE
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccccccccccccccHHHHhhcccEEE
Confidence 58999999975 37899999999999999999752 1 23455666788999998
Q ss_pred eEeccC-CCHHHHHHHHHcCCCC-CccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 53 SCFRYV-NDYPDALEMVASGKCP-VRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 53 g~~~~~-~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
++.... ..++++++++.+|+++ +.++++++|+|+|+++||+.+.+++ . +|+|+.++.
T Consensus 335 g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~-~-gKvvi~~~~ 393 (398)
T 1kol_A 335 TGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGV-P-KKFVIDPHK 393 (398)
T ss_dssp ESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTC-S-CEEEECTTC
T ss_pred ecccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCC-c-eEEEEEeCC
Confidence 865433 5688999999999998 4457889999999999999999887 4 999998754
No 36
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=99.70 E-value=1.2e-16 Score=109.71 Aligned_cols=106 Identities=16% Similarity=0.218 Sum_probs=91.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++|||+|. ..+..++++++++|+++.+|...+ ...++...++.+++++.|++.+. .++.++++++++|+++ ++
T Consensus 307 ~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~~ 383 (447)
T 4a0s_A 307 PDIVFEHTGR-VTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVV--PA 383 (447)
T ss_dssp CSEEEECSCH-HHHHHHHHHSCTTCEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSC--CC
T ss_pred ceEEEECCCc-hHHHHHHHHHhcCCEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCcc--cc
Confidence 6999999987 568999999999999999997654 56677788899999999998766 7788999999999885 47
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
++++|||+|+++||+.+.+++ ..+|+|+.+.
T Consensus 384 i~~~~~l~~~~~A~~~~~~~~-~~GKvvv~~~ 414 (447)
T 4a0s_A 384 MSAVYPLAEAAEACRVVQTSR-QVGKVAVLCM 414 (447)
T ss_dssp EEEEEEGGGHHHHHHHHHTTC-CSSEEEEESS
T ss_pred eeEEEcHHHHHHHHHHHhcCC-CceEEEEEeC
Confidence 889999999999999999888 4599988763
No 37
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=99.70 E-value=9.9e-17 Score=106.41 Aligned_cols=107 Identities=15% Similarity=0.232 Sum_probs=89.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCc-cccChhhhhhcCeeEEeEecc----C-C----CHHHHHHHHHc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQM-VSVPLVNACAKEIDILSCFRY----V-N----DYPDALEMVAS 70 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~l~g~~~~----~-~----~~~~~~~~~~~ 70 (112)
+|++|||+|. ..+..++++++++|+++.+|...+. .+++...++.+++++.+++.. . . .++++++++.+
T Consensus 218 ~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 296 (334)
T 3qwb_A 218 VDASFDSVGK-DTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNS 296 (334)
T ss_dssp EEEEEECCGG-GGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHT
T ss_pred ceEEEECCCh-HHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHC
Confidence 5899999987 6689999999999999999986653 467888899999999986532 1 2 34689999999
Q ss_pred CCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 71 GKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 71 g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
|++++. ++++|||+++++||+.+.+++ ..+|+|+.+++
T Consensus 297 g~l~~~--i~~~~~l~~~~~A~~~~~~~~-~~gKvvi~~~q 334 (334)
T 3qwb_A 297 KKLNIK--IYKTYPLRDYRTAAADIESRK-TVGKLVLEIPQ 334 (334)
T ss_dssp TSSCCC--EEEEEEGGGHHHHHHHHHTTC-CCBEEEEECCC
T ss_pred CCccCc--eeeEEcHHHHHHHHHHHHhCC-CceEEEEecCC
Confidence 998764 889999999999999999988 45999998864
No 38
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=99.69 E-value=6.7e-17 Score=107.85 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=80.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC---c--------------cccChhhhhhcCeeEEeEecc------
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ---M--------------VSVPLVNACAKEIDILSCFRY------ 57 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~---~--------------~~~~~~~~~~~~~~l~g~~~~------ 57 (112)
+|++|||+|++. +.+++++++++|+++.+|.... . ..++...++.+++++.|+...
T Consensus 209 ~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~ 287 (349)
T 4a27_A 209 VDIVLDCLCGDN-TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQ 287 (349)
T ss_dssp EEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTS
T ss_pred ceEEEECCCchh-HHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccc
Confidence 589999998866 5899999999999999997531 1 235666788899999998742
Q ss_pred ------CCCHHHHHHHHHcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 58 ------VNDYPDALEMVASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 58 ------~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
.++++++++++++|+++ ++++++|+|+++++||+.+.+++ ..+|+|+.+++
T Consensus 288 ~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~-~~GKvvi~~~~ 344 (349)
T 4a27_A 288 GRAGLIRGVVEKLIGLYNQKKIK--PVVDSLWALEEVKEAMQRIHDRG-NIGKLILDVEK 344 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCC--CCEEEEECGGGHHHHHHHHHTTC-CSSEEEEETTC
T ss_pred cchHHHHHHHHHHHHHHHCCCcc--ccccceECHHHHHHHHHHHHhCC-CCceEEEecCC
Confidence 25688999999999885 57889999999999999999888 45999999865
No 39
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=99.68 E-value=3.1e-17 Score=109.87 Aligned_cols=105 Identities=14% Similarity=0.164 Sum_probs=90.7
Q ss_pred CcEEEEcccC--hHHHHHHHhhccCCcEEEEEecCCCcc-ccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCc
Q psy12355 1 MMLYLDPLGT--ENCLTLGINVTKMGGKLMLVGMGPQMV-SVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVR 76 (112)
Q Consensus 1 ~D~v~d~~g~--~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~ 76 (112)
+|++|||+|. +.++..++++++++|+++.+|.+.. . .++...++.+++++.|++.+. .+++++++++.+|++++
T Consensus 244 ~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~- 321 (360)
T 1piw_A 244 FDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIKI- 321 (360)
T ss_dssp EEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTTCCC-
T ss_pred CCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCcc-
Confidence 5899999998 6778999999999999999998665 4 566677889999999988655 78999999999998865
Q ss_pred cceeeeeCccc--HHHHHHHHhcCCCCceEEEEeeC
Q psy12355 77 KLITHNFKLEE--AVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 77 ~~~~~~~~l~~--~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
.+ ++|||++ +++||+.+.+++. .+|+|+.++
T Consensus 322 -~i-~~~~l~~~~~~~A~~~~~~~~~-~gKvvi~~~ 354 (360)
T 1piw_A 322 -WV-ETLPVGEAGVHEAFERMEKGDV-RYRFTLVGY 354 (360)
T ss_dssp -CE-EEEESSHHHHHHHHHHHHHTCC-SSEEEEECC
T ss_pred -eE-EEEeccHhHHHHHHHHHHCCCC-ceEEEEecC
Confidence 36 8999999 9999999998873 489999875
No 40
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=99.68 E-value=1.2e-16 Score=106.86 Aligned_cols=105 Identities=15% Similarity=0.251 Sum_probs=88.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccc-cChhhhhhcCeeEEeEeccC-CC----------HHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVS-VPLVNACAKEIDILSCFRYV-ND----------YPDALEM 67 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~-~~~~~~~~~~~~l~g~~~~~-~~----------~~~~~~~ 67 (112)
+|++|||+|.+ .+..++++++++|+++.+|.... ... +++..++.+++++.|++... .. +++++++
T Consensus 236 ~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l 314 (353)
T 4dup_A 236 VDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPL 314 (353)
T ss_dssp EEEEEESCCGG-GHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHH
T ss_pred ceEEEECCCHH-HHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHH
Confidence 58999999875 68999999999999999997654 344 77888999999999988644 22 7889999
Q ss_pred HHcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 68 VASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 68 ~~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+++|+++ ++++++|+|+++++||+.+.+++ ..+|+|+++
T Consensus 315 ~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~-~~gKvvl~~ 353 (353)
T 4dup_A 315 LEAGTVA--PVIHKVFAFEDVADAHRLLEEGS-HVGKVMLTV 353 (353)
T ss_dssp HHHTSSC--CCEEEEEEGGGHHHHHHHHHHTC-CSSEEEEEC
T ss_pred HHCCCcc--CCcceEEeHHHHHHHHHHHHhCC-CCceEEEeC
Confidence 9999875 57889999999999999999988 458999874
No 41
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=99.68 E-value=1.1e-16 Score=107.29 Aligned_cols=102 Identities=17% Similarity=0.230 Sum_probs=88.3
Q ss_pred CcEEEEcccChH--HHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccC-CCHHHHHHHHHcCCCCCcc
Q psy12355 1 MMLYLDPLGTEN--CLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV-NDYPDALEMVASGKCPVRK 77 (112)
Q Consensus 1 ~D~v~d~~g~~~--~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~g~~~~~~ 77 (112)
+|++|||+|.+. ++..++++ ++|+++.+|.+.++ ++++..++.+++++.|++... .+++++++++.+|++++
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~-- 329 (359)
T 1h2b_A 255 VNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGKVRV-- 329 (359)
T ss_dssp EEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCC--
T ss_pred CcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCcc--
Confidence 589999999986 88999988 99999999986655 677778889999999988654 78999999999998865
Q ss_pred ceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 78 LITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 78 ~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
.+ ++|||+|+++||+.+.+++. .+|+|+.+
T Consensus 330 ~i-~~~~l~~~~~A~~~~~~~~~-~gKvvv~~ 359 (359)
T 1h2b_A 330 EV-DIHKLDEINDVLERLEKGEV-LGRAVLIP 359 (359)
T ss_dssp CE-EEEEGGGHHHHHHHHHTTCC-SSEEEEEC
T ss_pred eE-EEEeHHHHHHHHHHHHcCCC-ceEEEeeC
Confidence 46 89999999999999998873 59999864
No 42
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=99.68 E-value=1.1e-16 Score=107.29 Aligned_cols=107 Identities=14% Similarity=0.082 Sum_probs=87.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEeccC----------CCHHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRYV----------NDYPDALEMVA 69 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~~----------~~~~~~~~~~~ 69 (112)
+|++|||+|++... .++++++++|+++.+|.... +.+++...++.+++++.|++.+. ..++++++++.
T Consensus 246 ~Dvvid~~G~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (364)
T 1gu7_A 246 AKLALNCVGGKSST-GIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYE 324 (364)
T ss_dssp EEEEEESSCHHHHH-HHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ceEEEECCCchhHH-HHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHH
Confidence 58999999887654 88999999999999997654 56677778888999999987432 46889999999
Q ss_pred cCCCCCccceeeee-CcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 70 SGKCPVRKLITHNF-KLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 70 ~g~~~~~~~~~~~~-~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+|++++.+..+..+ +++++.+||+.+.+++ ..+|+|+.+
T Consensus 325 ~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~-~~gKvvv~~ 364 (364)
T 1gu7_A 325 EGKLTDAKSIETLYDGTKPLHELYQDGVANS-KDGKQLITY 364 (364)
T ss_dssp HTCCCCCCCEEEECCSSSCHHHHHHHHHHTG-GGSCEEEEC
T ss_pred cCCcccccceEEecCchhhHHHHHHHHHhCC-CCceEEEeC
Confidence 99998876655445 4569999999998886 459999874
No 43
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=99.67 E-value=3.1e-16 Score=104.91 Aligned_cols=105 Identities=14% Similarity=0.118 Sum_probs=86.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC-CccccChhhhhhcCeeEEeEecc-----------CCCHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP-QMVSVPLVNACAKEIDILSCFRY-----------VNDYPDALEMV 68 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~l~g~~~~-----------~~~~~~~~~~~ 68 (112)
+|++|||+|++. ...++++++++|+++.+|... .+..++...++.+++++.|++.+ .+.++++++++
T Consensus 241 ~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (357)
T 1zsy_A 241 PRLALNCVGGKS-STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLI 319 (357)
T ss_dssp CSEEEESSCHHH-HHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred ceEEEECCCcHH-HHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHH
Confidence 599999998765 467999999999999998644 35667777788899999998642 13478899999
Q ss_pred HcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 69 ASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 69 ~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
.+|++++. +.++|||+++++||+.+.+++. .+|+|+.+
T Consensus 320 ~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~-~gKvvl~~ 357 (357)
T 1zsy_A 320 RRGQLTAP--ACSQVPLQDYQSALEASMKPFI-SSKQILTM 357 (357)
T ss_dssp HTTSSCCC--CEEEEEGGGHHHHHHHHTSSSC-SSEEEEEC
T ss_pred HcCCCcCc--cceEEcHHHHHHHHHHHHhCCC-CCcEEEeC
Confidence 99998764 5578999999999999988873 48999874
No 44
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=99.67 E-value=2.4e-16 Score=104.83 Aligned_cols=107 Identities=20% Similarity=0.136 Sum_probs=88.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC------ccccChhhhhhcCeeEEeEeccC--C----CHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ------MVSVPLVNACAKEIDILSCFRYV--N----DYPDALEMV 68 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~l~g~~~~~--~----~~~~~~~~~ 68 (112)
+|++|||+|. ..+..++++++++|+++.+|.... ...++...++.+++++.|++.+. . .++++++++
T Consensus 226 ~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~ 304 (345)
T 2j3h_A 226 IDIYFENVGG-KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHI 304 (345)
T ss_dssp EEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHH
T ss_pred CcEEEECCCH-HHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHH
Confidence 5899999987 678999999999999999996542 34566677889999999987543 2 388999999
Q ss_pred HcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 69 ASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 69 ~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
++|++++ ++..+|+|+++++||+.+.+++ ..+|+|+.+++
T Consensus 305 ~~g~i~~--~~~~~~~l~~~~~A~~~~~~~~-~~gKvvv~~~~ 344 (345)
T 2j3h_A 305 REGKITY--VEDVADGLEKAPEALVGLFHGK-NVGKQVVVVAR 344 (345)
T ss_dssp HTTSSCC--CEEEEESGGGSHHHHHHHHTTC-CSSEEEEESSC
T ss_pred HCCCCcC--cccccCCHHHHHHHHHHHHcCC-CceEEEEEeCC
Confidence 9998864 5666899999999999999887 45999999865
No 45
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=99.67 E-value=2e-16 Score=105.75 Aligned_cols=108 Identities=17% Similarity=0.215 Sum_probs=86.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccCh-hhhhhcCeeEEeEeccC-C-C---------HHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPL-VNACAKEIDILSCFRYV-N-D---------YPDALEM 67 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~-~~~~~~~~~l~g~~~~~-~-~---------~~~~~~~ 67 (112)
+|++|||+|.+ .+..++++++++|+++.+|...+ ...++. ..++.+++++.|++... . . +++++++
T Consensus 232 ~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l 310 (354)
T 2j8z_A 232 VNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 310 (354)
T ss_dssp EEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGG
T ss_pred ceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHH
Confidence 48999999875 68999999999999999997654 456777 77889999999987533 1 1 2357888
Q ss_pred HHcC-CCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 68 VASG-KCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 68 ~~~g-~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
+.+| ++++.++++++|||+++++||+.+.+++ ..+|+|+.++
T Consensus 311 ~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~-~~gKvvv~~~ 353 (354)
T 2j8z_A 311 FSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANK-NIGKIVLELP 353 (354)
T ss_dssp GTC---CCCCCCEEEEEEGGGHHHHHHHHHTTC-CSSEEEEECC
T ss_pred HHcCCCccccCccceEEcHHHHHHHHHHHHhCC-CCceEEEecC
Confidence 8999 4444667899999999999999998877 3599999875
No 46
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=99.67 E-value=1.7e-16 Score=104.78 Aligned_cols=104 Identities=18% Similarity=0.133 Sum_probs=85.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccC--CCHHHHHHHHHcCCCCCccc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV--NDYPDALEMVASGKCPVRKL 78 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~--~~~~~~~~~~~~g~~~~~~~ 78 (112)
+|++|||+|.+. +.+++++++++|+++.+|...... ....+..+++++.+++... ++++++++++.+|++++ .
T Consensus 216 ~D~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~ 290 (321)
T 3tqh_A 216 VDAVIDLVGGDV-GIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRI--E 290 (321)
T ss_dssp EEEEEESSCHHH-HHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSCC--C
T ss_pred CCEEEECCCcHH-HHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCccc--c
Confidence 589999998766 499999999999999998654322 1234677899998865432 78999999999998865 5
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
++++|||+|+++||+.+.+++ ..+|+|+.++
T Consensus 291 i~~~~~l~~~~~A~~~~~~~~-~~gKvvl~~~ 321 (321)
T 3tqh_A 291 ISRIFQLSEAVTAHELLETGH-VRGKLVFKVR 321 (321)
T ss_dssp EEEEECGGGHHHHHHHHHTTC-CCSEEEEECC
T ss_pred cccEEcHHHHHHHHHHHHcCC-CCceEEEEeC
Confidence 889999999999999999988 4589999864
No 47
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=99.66 E-value=2.3e-16 Score=104.60 Aligned_cols=107 Identities=15% Similarity=0.191 Sum_probs=89.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChh-hhhhcC--eeEEeEec-c--C-----CCHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLV-NACAKE--IDILSCFR-Y--V-----NDYPDALEMV 68 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~-~~~~~~--~~l~g~~~-~--~-----~~~~~~~~~~ 68 (112)
+|++|||+|. .++..++++++++|+++.+|...+ ...++.. .++.++ +++.|++. + . +.++++++++
T Consensus 215 ~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~ 293 (333)
T 1wly_A 215 VDVVYDSIGK-DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAV 293 (333)
T ss_dssp EEEEEECSCT-TTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHH
T ss_pred CeEEEECCcH-HHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHH
Confidence 4899999988 668999999999999999997654 4567777 788899 99998754 1 1 2588999999
Q ss_pred HcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 69 ASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 69 ~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
.+|++++ +++++|||+++++||+.+.+++. .+|+|+.+++
T Consensus 294 ~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~-~gKvvi~~~~ 333 (333)
T 1wly_A 294 KAGVLHS--SVAKTFPLREAAAAHKYMGGRQT-IGSIVLLPQA 333 (333)
T ss_dssp HTTSCCC--CEEEEEEGGGHHHHHHHHHHCSC-CSEEEEETTC
T ss_pred HCCCcCC--CcceEEeHHHHHHHHHHHHcCCC-ceEEEEEeCC
Confidence 9998854 68899999999999999998873 5999998753
No 48
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=99.66 E-value=3.7e-16 Score=104.17 Aligned_cols=106 Identities=13% Similarity=0.059 Sum_probs=86.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccC-------------CCHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV-------------NDYPDALEM 67 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~-------------~~~~~~~~~ 67 (112)
+|++|||+|.+.++..++++++++|+++.+|.. ..++++..+..+++++.+++.+. +.+++++++
T Consensus 218 ~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 295 (346)
T 3fbg_A 218 VDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF--ENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNK 295 (346)
T ss_dssp EEEEEESSCHHHHHHHHHHHEEEEEEEEESSCC--SSCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHH
T ss_pred ccEEEECCCchHHHHHHHHHhccCCEEEEECCC--CCCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHH
Confidence 589999999888889999999999999988743 34466677888999999876431 347889999
Q ss_pred HHcCCCCCccceeeee---CcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 68 VASGKCPVRKLITHNF---KLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 68 ~~~g~~~~~~~~~~~~---~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+.+|++++ .++++| +++++++||+.+.+++ ..+|+|+.+++
T Consensus 296 ~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~g~-~~GKvvl~~~~ 339 (346)
T 3fbg_A 296 VEQNIYQP--TTTKVIEGLTTENIYQAHQILESNT-MIGKLVINLNE 339 (346)
T ss_dssp HHTTSSCC--CEEEEEESCCHHHHHHHHHHHHTTC-CCSEEEEEC--
T ss_pred HHCCCEEC--CccceecCCCHHHHHHHHHHHhcCC-cceEEEEecCC
Confidence 99998764 577777 9999999999999998 45999998864
No 49
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=99.66 E-value=2.3e-16 Score=105.10 Aligned_cols=104 Identities=14% Similarity=0.243 Sum_probs=80.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEeccC----------CCHHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRYV----------NDYPDALEMVA 69 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~~----------~~~~~~~~~~~ 69 (112)
+|++|||+|.+ .+..++++++++|+++.+|...+ ...++...++.+++++.|+.... +.+++++++++
T Consensus 228 ~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 306 (342)
T 4eye_A 228 VDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVA 306 (342)
T ss_dssp EEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred ceEEEECCchh-HHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHH
Confidence 58999999875 58999999999999999997664 34667777899999999987421 35888999999
Q ss_pred cCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 70 SGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 70 ~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+| + .++++++|+|+++++||+.+.+++ ..+|+|+.+
T Consensus 307 ~g-l--~~~i~~~~~l~~~~~A~~~~~~~~-~~gKvvl~P 342 (342)
T 4eye_A 307 EG-M--RPPVSARIPLSEGRQALQDFADGK-VYGKMVLVP 342 (342)
T ss_dssp TT-C--CCCEEEEEEGGGHHHHHHHHHTTC-CCSEEEEEC
T ss_pred cC-C--CCCcceEEeHHHHHHHHHHHHhCC-CCceEEEeC
Confidence 99 5 557889999999999999999988 458999874
No 50
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=99.65 E-value=4e-17 Score=107.81 Aligned_cols=105 Identities=8% Similarity=0.126 Sum_probs=88.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEeccC-------CCHHHHHHHHHcCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRYV-------NDYPDALEMVASGK 72 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~~-------~~~~~~~~~~~~g~ 72 (112)
+|++|||+|.+ .+..++++++++|+++.+|.... ..+++...++.+++++.|++... +.++++++++.+|+
T Consensus 212 ~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~ 290 (324)
T 3nx4_A 212 WAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESF 290 (324)
T ss_dssp EEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHH
T ss_pred ccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCC
Confidence 48999999875 79999999999999999997665 46777788899999999986422 45788899999997
Q ss_pred CCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 73 CPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 73 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
+++ + +++|+|+++++||+.+.+++. .+|+|+.++
T Consensus 291 l~~--~-~~~~~l~~~~~A~~~~~~~~~-~gkvvv~~~ 324 (324)
T 3nx4_A 291 YAQ--A-ATEITLADAPKFADAIINNQV-QGRTLVKIK 324 (324)
T ss_dssp HHH--H-EEEEEGGGHHHHHHHHHTTCC-CSEEEEECC
T ss_pred CCC--C-ceeEeHHHHHHHHHHHHhCCC-CceEEEecC
Confidence 754 4 889999999999999999884 599999874
No 51
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=99.65 E-value=4.7e-16 Score=103.20 Aligned_cols=105 Identities=13% Similarity=0.122 Sum_probs=87.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-------ccccChhhhhhcCeeEEeEeccC------CCHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-------MVSVPLVNACAKEIDILSCFRYV------NDYPDALEM 67 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-------~~~~~~~~~~~~~~~l~g~~~~~------~~~~~~~~~ 67 (112)
+|++|||+|. ..+..++++++++|+++.+|.... ..+++...++.+++++.|++.+. +.+++++++
T Consensus 219 ~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l 297 (336)
T 4b7c_A 219 IDVFFDNVGG-EILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATW 297 (336)
T ss_dssp EEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHH
T ss_pred ceEEEECCCc-chHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHH
Confidence 5899999986 678999999999999999996541 13566777899999999988643 568899999
Q ss_pred HHcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 68 VASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 68 ~~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+.+|++++... .+++|+++++||+.+.+++ ..+|+|+++
T Consensus 298 ~~~g~l~~~~~--~~~~l~~~~~A~~~~~~~~-~~gKvvi~~ 336 (336)
T 4b7c_A 298 LAEGKLQSRED--IVEGLETFPETLLKLFSGE-NFGKLVLKV 336 (336)
T ss_dssp HHTTSSCCCEE--EEECGGGHHHHHHHHHTTC-CCSEEEEEC
T ss_pred HHCCCccccee--eecCHHHHHHHHHHHHcCC-CCceEEEeC
Confidence 99999987644 4579999999999999988 459999874
No 52
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=99.64 E-value=1.4e-16 Score=106.24 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=84.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccCh-hhhhhcCeeEEeEecc----------CCCHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPL-VNACAKEIDILSCFRY----------VNDYPDALEMV 68 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~-~~~~~~~~~l~g~~~~----------~~~~~~~~~~~ 68 (112)
+|++|||+|.+. +.+++++++++|+++.+|.... ...++. ..++.+++++.|++.+ .+.++++++++
T Consensus 234 ~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (349)
T 3pi7_A 234 PRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRF 312 (349)
T ss_dssp CCEEEESSCHHH-HHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTT
T ss_pred CcEEEECCCChh-HHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHH
Confidence 699999998755 6889999999999999996543 566777 7889999999998753 24678888999
Q ss_pred HcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 69 ASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 69 ~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++|+++ ++++++|||+++++||+.+..+. .+|+|+.+
T Consensus 313 ~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~--~gKvvl~p 349 (349)
T 3pi7_A 313 SDGRWS--TDVTAVVPLAEAIAWVPAELTKP--NGKVFIRP 349 (349)
T ss_dssp TTSSCC--C-CCEEEEHHHHHHHHHHHHTSS--SSCEEEEC
T ss_pred HcCCcc--cccceEEcHHHHHHHHHHHhCCC--CceEEEeC
Confidence 999885 46889999999999999655443 39999875
No 53
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=99.64 E-value=1.3e-15 Score=102.43 Aligned_cols=111 Identities=13% Similarity=0.102 Sum_probs=88.2
Q ss_pred CcEEEEcccChHHHHHHHhhc-cCCcEEEEEecCCC------ccccC---hhhhhhcCeeEEeEeccC----------CC
Q psy12355 1 MMLYLDPLGTENCLTLGINVT-KMGGKLMLVGMGPQ------MVSVP---LVNACAKEIDILSCFRYV----------ND 60 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l-~~~G~iv~~g~~~~------~~~~~---~~~~~~~~~~l~g~~~~~----------~~ 60 (112)
+|++|||+|.+.++..+++++ +++|+++.+|.... ....+ ...++.+++++.|++... +.
T Consensus 232 ~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~ 311 (371)
T 3gqv_A 232 LRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDL 311 (371)
T ss_dssp CCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHH
T ss_pred ccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHH
Confidence 699999999988899999999 59999999995432 12222 235778999998875432 12
Q ss_pred HHHHHHHHHcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 61 YPDALEMVASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 61 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
++++++++++|++++.+++++.|+|+++++||+.+.+++....|+|+.+++
T Consensus 312 ~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~ 362 (371)
T 3gqv_A 312 WRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG 362 (371)
T ss_dssp HHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred HHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence 457889999999999988888899999999999999988554578887754
No 54
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=99.62 E-value=7.5e-16 Score=101.99 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=84.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEecc--C-----CCHHHHHHHHHcCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRY--V-----NDYPDALEMVASGK 72 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~--~-----~~~~~~~~~~~~g~ 72 (112)
+|++|||+|. .++.+++++++++|+++.+|...+ +.+++...++.+++++.|++.. . +.++++++++.+|+
T Consensus 218 ~d~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 296 (330)
T 1tt7_A 218 WQGAVDPVGG-KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQ 296 (330)
T ss_dssp EEEEEESCCT-HHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSC
T ss_pred ccEEEECCcH-HHHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCC
Confidence 5899999988 579999999999999999997654 4667777788999999998521 1 23555666667786
Q ss_pred CCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 73 CPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 73 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+ .++++++|||+++++||+.+.+++ ..+|+|+.+
T Consensus 297 l--~~~i~~~~~l~~~~~A~~~~~~~~-~~gKvvi~~ 330 (330)
T 1tt7_A 297 L--LTIVDREVSLEETPGALKDILQNR-IQGRVIVKL 330 (330)
T ss_dssp S--TTSEEEEECSTTHHHHHHHTTTTC-CSSEEEECC
T ss_pred c--ccccceEEcHHHHHHHHHHHHcCC-CCCeEEEeC
Confidence 6 456889999999999999998887 359999863
No 55
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=99.62 E-value=1.5e-15 Score=101.58 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=86.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccCh---------hhhhhcCeeEEeEecc------CCCHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPL---------VNACAKEIDILSCFRY------VNDYPDA 64 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~---------~~~~~~~~~l~g~~~~------~~~~~~~ 64 (112)
+|++|||+|. .++..++++++++|+++.+|.... ...++. ..++.+++++.|++.. .+.++++
T Consensus 231 ~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 309 (357)
T 2zb4_A 231 VDVYFDNVGG-NISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQL 309 (357)
T ss_dssp EEEEEESCCH-HHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHH
T ss_pred CCEEEECCCH-HHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHH
Confidence 4899999985 678999999999999999997543 222332 4678899999998642 2568999
Q ss_pred HHHHHcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 65 LEMVASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 65 ~~~~~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
++++.+|++++... .+|+|+++++||+.+.+++ ..+|+|+.+++
T Consensus 310 ~~l~~~g~l~~~~~--~~~~l~~~~~A~~~~~~~~-~~gKvvi~~~~ 353 (357)
T 2zb4_A 310 SQWFKEGKLKIKET--VINGLENMGAAFQSMMTGG-NIGKQIVCISE 353 (357)
T ss_dssp HHHHHTTCCCCCEE--EEECGGGHHHHHHHHHTTC-CSBEEEEECCC
T ss_pred HHHHHcCCCcCccc--eecCHHHHHHHHHHHHcCC-CCceEEEEEec
Confidence 99999999987643 4599999999999999887 35999998864
No 56
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=99.62 E-value=2e-15 Score=101.27 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=86.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccC-------------CCHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV-------------NDYPDALEM 67 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~-------------~~~~~~~~~ 67 (112)
+|++|||+|++.++..++++++++|+++.+|. +.++++..+..+++++.++..+. +.+++++++
T Consensus 240 ~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~---~~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 316 (363)
T 4dvj_A 240 PAFVFSTTHTDKHAAEIADLIAPQGRFCLIDD---PSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRL 316 (363)
T ss_dssp EEEEEECSCHHHHHHHHHHHSCTTCEEEECSC---CSSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHH
T ss_pred ceEEEECCCchhhHHHHHHHhcCCCEEEEECC---CCccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHH
Confidence 58999999988889999999999999999964 34567777889999999866421 347889999
Q ss_pred HHcCCCCCccceeeee---CcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 68 VASGKCPVRKLITHNF---KLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 68 ~~~g~~~~~~~~~~~~---~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
+++|++++ .+++++ +++++++||+.+.+++. .+|+|+.+.
T Consensus 317 ~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~~~~-~GKvVl~~~ 359 (363)
T 4dvj_A 317 VDEGRLRT--TLTNRLSPINAANLKQAHALVESGTA-RGKVVIEGF 359 (363)
T ss_dssp HHHTSSCC--CEEEEECSCSHHHHHHHHHHHHHTCC-CSEEEEECS
T ss_pred HHCCCeec--cccceecCCCHHHHHHHHHHHHhCCC-ceEEEEeCc
Confidence 99998865 466655 99999999999999884 589999874
No 57
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=99.62 E-value=6.8e-16 Score=101.14 Aligned_cols=104 Identities=16% Similarity=0.276 Sum_probs=83.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEecc-----CCCHHHHHH---HHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRY-----VNDYPDALE---MVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~-----~~~~~~~~~---~~~~g 71 (112)
+|++|| +|. .++..++++++++|+++.+|.... ...+++..++.+++++.|+... .+.++++++ ++.+|
T Consensus 190 ~d~vid-~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g 267 (302)
T 1iz0_A 190 LDLVLE-VRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGR 267 (302)
T ss_dssp EEEEEE-CSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTT
T ss_pred ceEEEE-CCH-HHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcC
Confidence 589999 988 678999999999999999997654 3356777788999999998742 257889999 99999
Q ss_pred CCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 72 KCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 72 ~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+++ ++++++|||+++++||+.+.+++ ..+|+++.+
T Consensus 268 ~l~--~~i~~~~~l~~~~~A~~~~~~~~-~~gKvvv~~ 302 (302)
T 1iz0_A 268 ELR--PVVGPVFPFAEAEAAFRALLDRG-HTGKVVVRL 302 (302)
T ss_dssp TBC--CCEEEEEEGGGHHHHHHHTTCTT-CCBEEEEEC
T ss_pred Ccc--cccceEEcHHHHHHHHHHHHcCC-CCceEEEeC
Confidence 875 46889999999999999998877 359999864
No 58
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=99.61 E-value=1.3e-15 Score=100.68 Aligned_cols=105 Identities=15% Similarity=0.212 Sum_probs=85.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhc-CeeEEeEec--c-------CCCHHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAK-EIDILSCFR--Y-------VNDYPDALEMVA 69 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~-~~~l~g~~~--~-------~~~~~~~~~~~~ 69 (112)
+|++|||+| ..++..++++++++|+++.+|...+ ...++...++.+ ++++.+... + .+.++++++++.
T Consensus 210 ~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 288 (327)
T 1qor_A 210 VRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIA 288 (327)
T ss_dssp EEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred ceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHH
Confidence 489999998 6779999999999999999997654 345777778888 888876432 1 245789999999
Q ss_pred cCCCCCcccee--eeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 70 SGKCPVRKLIT--HNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 70 ~g~~~~~~~~~--~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+|++++ +++ ++|+|+++++||+.+.+++ ..+|+|+.+
T Consensus 289 ~g~l~~--~i~~~~~~~l~~~~~A~~~~~~~~-~~gKvvl~~ 327 (327)
T 1qor_A 289 SGVIKV--DVAEQQKYPLKDAQRAHEILESRA-TQGSSLLIP 327 (327)
T ss_dssp TTSSCC--CCCGGGEEEGGGHHHHHHHHHTTC-CCBCCEEEC
T ss_pred CCCccc--ccccCcEEcHHHHHHHHHHHHhCC-CCceEEEeC
Confidence 998865 577 8999999999999998877 359998864
No 59
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=99.61 E-value=1.9e-15 Score=99.93 Aligned_cols=105 Identities=17% Similarity=0.157 Sum_probs=84.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCc-cccChhhhhhc-CeeEEeEec----c-CCC----HHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQM-VSVPLVNACAK-EIDILSCFR----Y-VND----YPDALEMVA 69 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~-~~~l~g~~~----~-~~~----~~~~~~~~~ 69 (112)
+|++|||+|. .++..++++++++|+++.+|...++ ..++...++.+ ++.+.+... . ..+ ++++++++.
T Consensus 210 ~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 288 (325)
T 3jyn_A 210 CPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLA 288 (325)
T ss_dssp EEEEEESSCG-GGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHH
T ss_pred ceEEEECCCh-HHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHH
Confidence 5899999987 6689999999999999999987654 36777777777 667665431 1 233 458999999
Q ss_pred cCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 70 SGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 70 ~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
+|++++. ++++|||+++++||+.+.+++ ..+|+|+.+
T Consensus 289 ~g~l~~~--i~~~~~l~~~~~A~~~~~~~~-~~Gkvvl~p 325 (325)
T 3jyn_A 289 SGKLKVD--GIEQYALKDAAKAQIELSARR-TTGSTILIP 325 (325)
T ss_dssp TTSSCCC--CCEEEEGGGHHHHHHHHHTTC-CCSCEEEEC
T ss_pred CCCeeCc--cccEEcHHHHHHHHHHHHcCC-CCceEEEeC
Confidence 9998775 788999999999999999988 459999864
No 60
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=99.60 E-value=1.9e-15 Score=101.29 Aligned_cols=108 Identities=17% Similarity=0.191 Sum_probs=85.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-c--c--------ccChhhhhhcCeeEEeEecc------CCCHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-M--V--------SVPLVNACAKEIDILSCFRY------VNDYPD 63 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~--~--------~~~~~~~~~~~~~l~g~~~~------~~~~~~ 63 (112)
+|++|||+|. ..+..++++++++|+++.+|.... . . .+ ...++.+++++.|++.. .+.+++
T Consensus 232 ~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 309 (362)
T 2c0c_A 232 VDVVYESVGG-AMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHYLSKYQAAMSH 309 (362)
T ss_dssp EEEEEECSCT-HHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGCGGGHHHHHHH
T ss_pred CCEEEECCCH-HHHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhhhhhhHHHHHHH
Confidence 5899999987 568999999999999999996442 1 1 12 24678899999998743 246889
Q ss_pred HHHHHHcCCCCCccc------eeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 64 ALEMVASGKCPVRKL------ITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 64 ~~~~~~~g~~~~~~~------~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+++++++|++++... +++.++|+++++||+.+.+++ ..+|+|+.+++
T Consensus 310 ~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~-~~gKvvv~~~~ 362 (362)
T 2c0c_A 310 LLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGK-NTGKIVVELPH 362 (362)
T ss_dssp HHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTC-CSBEEEEECCC
T ss_pred HHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCC-CCceEEEEcCC
Confidence 999999999876533 345689999999999999887 35999998753
No 61
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=99.59 E-value=2.6e-15 Score=99.98 Aligned_cols=105 Identities=20% Similarity=0.188 Sum_probs=86.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccC------------CCHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV------------NDYPDALEMV 68 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~------------~~~~~~~~~~ 68 (112)
+|++|||+|. ..+..++++++++|+++.+|... .++...+..+++++.+++.+. +.++++++++
T Consensus 217 ~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~ 292 (343)
T 3gaz_A 217 FDLVYDTLGG-PVLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALV 292 (343)
T ss_dssp EEEEEESSCT-HHHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHH
T ss_pred ceEEEECCCc-HHHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHH
Confidence 5899999986 56899999999999999998654 345667888999999976421 4688999999
Q ss_pred HcCCCCCcccee-eeeCcccHHHHHHHHhcCCC---CceEEEEeeCC
Q psy12355 69 ASGKCPVRKLIT-HNFKLEEAVEAFKTASKKAD---DTIKIMIHCRQ 111 (112)
Q Consensus 69 ~~g~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~---~~~k~v~~~~~ 111 (112)
.+|++++ +++ ++|||+++++||+.+.+++. ..||+++++..
T Consensus 293 ~~g~l~~--~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~ 337 (343)
T 3gaz_A 293 QTGKLAP--RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG 337 (343)
T ss_dssp HTTCCCC--CBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred HCCCccc--CccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence 9998864 677 79999999999999998873 25899998753
No 62
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=99.57 E-value=8.3e-16 Score=102.22 Aligned_cols=108 Identities=9% Similarity=0.169 Sum_probs=81.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhh-hcCeeEEeEec-----------cCCCHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNAC-AKEIDILSCFR-----------YVNDYPDALEMV 68 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~l~g~~~-----------~~~~~~~~~~~~ 68 (112)
+|++|||+|.+. ...++++++++|+++.+|.... .+++...+. ..++.+...+. ....++++++++
T Consensus 214 ~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (340)
T 3gms_A 214 ADAAIDSIGGPD-GNELAFSLRPNGHFLTIGLLSG-IQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLV 291 (340)
T ss_dssp EEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTS-CCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCChh-HHHHHHHhcCCCEEEEEeecCC-CCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHH
Confidence 589999998766 4567799999999999997654 233443333 24455444331 125788999999
Q ss_pred HcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 69 ASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 69 ~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
++|++++.+ ++++|||+++++||+.+.+++...+|+++.+.+
T Consensus 292 ~~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~ 333 (340)
T 3gms_A 292 ENEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE 333 (340)
T ss_dssp HTTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred HcCCCcccc-ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence 999998765 688999999999999999987334999998754
No 63
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=99.57 E-value=1.3e-14 Score=96.16 Aligned_cols=105 Identities=19% Similarity=0.201 Sum_probs=84.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC------cc-ccChhhhhhcCeeEEeEeccC-------CCHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ------MV-SVPLVNACAKEIDILSCFRYV-------NDYPDALE 66 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~-~~~~~~~~~~~~~l~g~~~~~-------~~~~~~~~ 66 (112)
+|++|||+|. ..+..++++++++|+++.+|.... .. ..+...++.+++++.|++.+. +.++++++
T Consensus 215 ~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 293 (333)
T 1v3u_A 215 YDCYFDNVGG-EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMK 293 (333)
T ss_dssp EEEEEESSCH-HHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHH
T ss_pred CeEEEECCCh-HHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHH
Confidence 4899999986 458999999999999999997543 11 135667889999999987532 45778999
Q ss_pred HHHcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 67 MVASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 67 ~~~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++.+|++++...+ .++|+++++||+.+.+++ ..+|+|+.+
T Consensus 294 l~~~g~l~~~~~~--~~~l~~~~~A~~~~~~~~-~~gKvvl~~ 333 (333)
T 1v3u_A 294 WVLEGKIQYHEHV--TKGFENMPAAFIEMLNGA-NLGKAVVTA 333 (333)
T ss_dssp HHHTTSSCCCEEE--EECGGGHHHHHHHHHTTC-CSBEEEEEC
T ss_pred HHHCCCccCcccc--ccCHHHHHHHHHHHHcCC-CCceEEEeC
Confidence 9999999876544 479999999999999887 359999864
No 64
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=99.56 E-value=2.3e-15 Score=99.59 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=81.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChhhhhhcCeeEEeEecc--C-----CCHHHHHHHHHcCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLVNACAKEIDILSCFRY--V-----NDYPDALEMVASGK 72 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~l~g~~~~--~-----~~~~~~~~~~~~g~ 72 (112)
+|++|||+|. .++.+++++++++|+++.+|...+ +.++++..++.+++++.|+... . +.++++.+++.+|
T Consensus 217 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g- 294 (328)
T 1xa0_A 217 WAAAVDPVGG-RTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD- 294 (328)
T ss_dssp EEEEEECSTT-TTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-
T ss_pred ccEEEECCcH-HHHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-
Confidence 5899999988 468999999999999999997654 4566777788999999997421 1 2345555555566
Q ss_pred CCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 73 CPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 73 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
+ .+ ++++|+|+++++||+.+.+++. .+|+|+.++
T Consensus 295 l--~~-~~~~~~l~~~~~A~~~~~~~~~-~gKvvv~~~ 328 (328)
T 1xa0_A 295 L--ER-IAQEISLAELPQALKRILRGEL-RGRTVVRLA 328 (328)
T ss_dssp H--HH-HEEEEEGGGHHHHHHHHHHTCC-CSEEEEECC
T ss_pred C--ce-eeeEeCHHHHHHHHHHHHcCCC-CCeEEEEeC
Confidence 4 33 4689999999999999998873 599999763
No 65
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=99.54 E-value=2.4e-14 Score=95.70 Aligned_cols=104 Identities=17% Similarity=0.295 Sum_probs=81.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEecc--C-CCHH----HHHHHHHcCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRY--V-NDYP----DALEMVASGKC 73 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~--~-~~~~----~~~~~~~~g~~ 73 (112)
+|++|||+|.+ .+..++++++++|+++.+|.. ++.+++...++.+++++.|+... . .+++ ++.+++.+|++
T Consensus 240 ~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l 317 (351)
T 1yb5_A 240 IDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWL 317 (351)
T ss_dssp EEEEEESCHHH-HHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCC
T ss_pred cEEEEECCChH-HHHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCc
Confidence 58999999864 689999999999999999964 34566777788999999998532 2 3444 45567778876
Q ss_pred CCccceeeeeCcccHHHHHHH-HhcCCCCceEEEEee
Q psy12355 74 PVRKLITHNFKLEEAVEAFKT-ASKKADDTIKIMIHC 109 (112)
Q Consensus 74 ~~~~~~~~~~~l~~~~~a~~~-~~~~~~~~~k~v~~~ 109 (112)
+ ++++++|||+++++|++. +++++ ..+|+|+.+
T Consensus 318 ~--~~i~~~~~l~~~~~A~~~~~~~~~-~~gKvvi~~ 351 (351)
T 1yb5_A 318 K--PVIGSQYPLEKVAEAHENIIHGSG-ATGKMILLL 351 (351)
T ss_dssp C--CCEEEEEEGGGHHHHHHHHHHSSC-CSSEEEEEC
T ss_pred c--CccceEEcHHHHHHHHHHHHHhCC-CCeEEEEeC
Confidence 4 568899999999999999 55554 359999864
No 66
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=99.54 E-value=7e-16 Score=101.62 Aligned_cols=105 Identities=15% Similarity=0.229 Sum_probs=71.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccC--hhhhhhcCeeEEeEeccC---------CCHHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVP--LVNACAKEIDILSCFRYV---------NDYPDALEMVA 69 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~--~~~~~~~~~~l~g~~~~~---------~~~~~~~~~~~ 69 (112)
+|++|||+|.+. +..++++++++|+++.+|.......++ ...+..+++++.+++.+. +.+++++++++
T Consensus 200 ~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 278 (315)
T 3goh_A 200 YFAIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIA 278 (315)
T ss_dssp EEEEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEECCCchh-HHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHH
Confidence 589999999866 588999999999999998654322222 223455555555554322 24678999999
Q ss_pred cCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 70 SGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 70 ~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+|+++ ++++++|||+++++||+.+. +. .+|+|+.+++
T Consensus 279 ~g~l~--~~i~~~~~l~~~~~A~~~~~-~~--~gKvvi~~~~ 315 (315)
T 3goh_A 279 QGKME--IAAPDIFRFEQMIEALDHSE-QT--KLKTVLTLNE 315 (315)
T ss_dssp TTSSC--CCCCEEEEGGGHHHHHHHHH-HH--CCCEEEESCC
T ss_pred CCCcc--cccceEecHHHHHHHHHHHH-hc--CCcEEEEecC
Confidence 99875 57889999999999999998 44 3999999864
No 67
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=99.48 E-value=1.9e-13 Score=99.51 Aligned_cols=105 Identities=12% Similarity=0.152 Sum_probs=81.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEecc-------CCCHHHHHHHHHcCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRY-------VNDYPDALEMVASGKC 73 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~-------~~~~~~~~~~~~~g~~ 73 (112)
+|+||||+|. +.+..++++++++||++.+|........... ...+++++.+.... .+.++++++++.+|++
T Consensus 413 vDvVld~~gg-~~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l 490 (795)
T 3slk_A 413 VDVVLNSLAG-EFADASLRMLPRGGRFLELGKTDVRDPVEVA-DAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVL 490 (795)
T ss_dssp CSEEEECCCT-TTTHHHHTSCTTCEEEEECCSTTCCCHHHHH-HHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSC
T ss_pred eEEEEECCCc-HHHHHHHHHhcCCCEEEEeccccccCccccc-ccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCc
Confidence 6999999987 5589999999999999999976542222221 22467776665421 1568899999999988
Q ss_pred CCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeC
Q psy12355 74 PVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCR 110 (112)
Q Consensus 74 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~ 110 (112)
++ +++++||++|+++||+.+.+++ ..+|+|+.++
T Consensus 491 ~p--~~~~~~~l~~~~eA~~~l~~g~-~~GKvVl~~~ 524 (795)
T 3slk_A 491 EP--LPVTAWDVRQAPEALRHLSQAR-HVGKLVLTMP 524 (795)
T ss_dssp CC--CCEEEEEGGGHHHHHHHHHHTC-CCBEEEEECC
T ss_pred CC--CcceeEcHHHHHHHHHHHhcCC-ccceEEEecC
Confidence 65 5788999999999999999988 4599999875
No 68
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=99.45 E-value=1.6e-13 Score=92.35 Aligned_cols=106 Identities=18% Similarity=0.197 Sum_probs=78.6
Q ss_pred CcEEEEcccCh-HHHHHHHhhccCCcEEEEEecCCCc-cc---cCh------hhhhh-------cCeeEEeEeccC--CC
Q psy12355 1 MMLYLDPLGTE-NCLTLGINVTKMGGKLMLVGMGPQM-VS---VPL------VNACA-------KEIDILSCFRYV--ND 60 (112)
Q Consensus 1 ~D~v~d~~g~~-~~~~~~~~~l~~~G~iv~~g~~~~~-~~---~~~------~~~~~-------~~~~l~g~~~~~--~~ 60 (112)
+|++|||+|.+ .++..++++++++|+++.+|..... .. ++. ..++. ++..+.+..... +.
T Consensus 249 ~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 328 (375)
T 2vn8_A 249 FDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPC 328 (375)
T ss_dssp BSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHH
T ss_pred CCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCCHHH
Confidence 59999999987 5678999999999999999965431 11 111 11222 344544433222 46
Q ss_pred HHHHHHHHHcCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 61 YPDALEMVASGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 61 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
++++++++.+|+++ ++++++|||+++++||+.+.+++ ..+|+|+.+
T Consensus 329 ~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~-~~gKvvi~~ 374 (375)
T 2vn8_A 329 LDDIAELVDAGKIR--PVIEQTFPFSKVPEAFLKVERGH-ARGKTVINV 374 (375)
T ss_dssp HHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCC-CSSEEEEEC
T ss_pred HHHHHHHHHCCCcc--cCcCeEECHHHHHHHHHHHHcCC-CCCeEEEEe
Confidence 79999999999875 57889999999999999999887 348999875
No 69
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=99.36 E-value=2.5e-13 Score=91.61 Aligned_cols=107 Identities=10% Similarity=0.103 Sum_probs=78.1
Q ss_pred CcEEEEcccChHHHHHHHhhcc-----CC-----------cEEEEEecCCCccccChhhhhhcCeeEEeEeccC------
Q psy12355 1 MMLYLDPLGTENCLTLGINVTK-----MG-----------GKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYV------ 58 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~-----~~-----------G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~------ 58 (112)
+|++|||+|.+..+.+++++++ ++ |+++.+|.... .++++..++.+++++.|++...
T Consensus 241 ~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 319 (379)
T 3iup_A 241 ATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDT-SPTEFNRNFGMAWGMGGWLLFPFLQKIG 319 (379)
T ss_dssp CCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEE-EEEEECCCSCSCEEEEECCHHHHHHHHC
T ss_pred ceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCC-CccccccccccceEEEEEEeeeecccCC
Confidence 6999999998877888888885 44 56666654332 2334456678899999976421
Q ss_pred -CC----HHHHHHHHHcCCCCCccceeeeeCcccH--HHHHHHHhcCCCCceEEEEeeCCC
Q psy12355 59 -ND----YPDALEMVASGKCPVRKLITHNFKLEEA--VEAFKTASKKADDTIKIMIHCRQG 112 (112)
Q Consensus 59 -~~----~~~~~~~~~~g~~~~~~~~~~~~~l~~~--~~a~~~~~~~~~~~~k~v~~~~~~ 112 (112)
+. ++++++++.+ . +.++++++|||+++ ++||+.+.+++ ..+|+|+.++++
T Consensus 320 ~~~~~~~~~~~~~~~~~-~--l~~~i~~~~~l~~~~~~~A~~~l~~~~-~~gKvVv~~~~g 376 (379)
T 3iup_A 320 RERANALKQRVVAELKT-T--FASHYSKEISLAEVLDLDMIAVYNKRA-TGEKYLINPNKG 376 (379)
T ss_dssp HHHHHHHHHHHHHTTTT-T--TCCCCSEEEEHHHHTCHHHHHHHTTCC-TTCCEEEETTTT
T ss_pred HHHHHHHHHHHHHHHhc-c--CCCcceEEecHHHhhhHHHHHHHhcCC-CCceEEEeCCCC
Confidence 22 3555566666 3 45578899999999 99999999987 459999998764
No 70
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.18 E-value=3.7e-11 Score=95.50 Aligned_cols=107 Identities=16% Similarity=0.193 Sum_probs=80.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCc-cccChhhhhhcCeeEEeEecc------CCCHHHHHHHHH----
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQM-VSVPLVNACAKEIDILSCFRY------VNDYPDALEMVA---- 69 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~l~g~~~~------~~~~~~~~~~~~---- 69 (112)
+|+||||+| .+.+..++++++++|+++.+|..... .......++.+++++.++... ...++++++++.
T Consensus 1741 vDvVld~~g-~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~ 1819 (2512)
T 2vz8_A 1741 VDLVLNSLA-EEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQ 1819 (2512)
T ss_dssp EEEEEECCC-HHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHT
T ss_pred ceEEEECCC-chHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHH
Confidence 589999996 67799999999999999999954321 111224567789999987642 134566666554
Q ss_pred cCCCCCccceeeeeCcccHHHHHHHHhcCCCCceEEEEeeCC
Q psy12355 70 SGKCPVRKLITHNFKLEEAVEAFKTASKKADDTIKIMIHCRQ 111 (112)
Q Consensus 70 ~g~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~~~ 111 (112)
+|.++ ++++++||++++++|++.+.+++. .+|+|+.++.
T Consensus 1820 ~g~l~--p~i~~~f~l~ei~eA~~~l~~g~~-~GKvVi~~~~ 1858 (2512)
T 2vz8_A 1820 EGVVQ--PLKCTVFPRTKVEAAFRYMAQGKH-IGKVVIQVRE 1858 (2512)
T ss_dssp TTCSC--CCCEEEEESSTHHHHHHHHHTTCC-SSEEEEECSC
T ss_pred cCCcC--CCcceEecHHHHHHHHHhhhccCc-cceEEEECCC
Confidence 56554 468899999999999999998884 5899998753
No 71
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=98.59 E-value=3.2e-08 Score=60.85 Aligned_cols=74 Identities=23% Similarity=0.251 Sum_probs=55.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC--ccccChhhhhhcCeeEEeEec------c----CCCHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ--MVSVPLVNACAKEIDILSCFR------Y----VNDYPDALEMV 68 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~~~~~~~~~~l~g~~~------~----~~~~~~~~~~~ 68 (112)
+|+++|++|. ..+..++++++++|+++.+|.... ..++++. .+.+++++.+... . .+.++++++++
T Consensus 108 ~D~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 185 (198)
T 1pqw_A 108 VDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHV 185 (198)
T ss_dssp EEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CeEEEECCch-HHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCcEEEEEehHHhhccCHHHHHHHHHHHHHHH
Confidence 4899999975 668999999999999999997542 2233332 3468888886421 1 25688999999
Q ss_pred HcCCCCCc
Q psy12355 69 ASGKCPVR 76 (112)
Q Consensus 69 ~~g~~~~~ 76 (112)
.+|++++.
T Consensus 186 ~~g~l~~~ 193 (198)
T 1pqw_A 186 ADGKLEVL 193 (198)
T ss_dssp HTTSSCCC
T ss_pred HcCCccCC
Confidence 99998774
No 72
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.36 E-value=2.6e-06 Score=59.42 Aligned_cols=96 Identities=9% Similarity=0.141 Sum_probs=61.3
Q ss_pred CcEEEEcccChHHHH-HHHhhccCCcEEEEEecCCCccccChhhhhhcCe---eEEeEec-cC-CCHHHHHHHHHcCCCC
Q psy12355 1 MMLYLDPLGTENCLT-LGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEI---DILSCFR-YV-NDYPDALEMVASGKCP 74 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~---~l~g~~~-~~-~~~~~~~~~~~~g~~~ 74 (112)
+|++++|+|....+. ..++.++++|+++.+|... .+++...+..+.+ ++.+... +. ..+...+.++.+|++.
T Consensus 330 aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~--~eId~~aL~~~aL~~~~I~~~ldv~~~~~~~~~l~LL~~grlv 407 (494)
T 3ce6_A 330 ADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD--NEIDMAGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLL 407 (494)
T ss_dssp CSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG--GGBCHHHHHHTTCEEEEEETTEEEEECTTTCCEEEEEGGGSCH
T ss_pred CCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC--CccCHHHHHHhhhccceEEEEEEEeecCCcchHHHHHhCCCEE
Confidence 599999999887666 7899999999999998654 3466666655443 4554321 11 1112233345556552
Q ss_pred --------CccceeeeeCcccHHHHHHHHhcCC
Q psy12355 75 --------VRKLITHNFKLEEAVEAFKTASKKA 99 (112)
Q Consensus 75 --------~~~~~~~~~~l~~~~~a~~~~~~~~ 99 (112)
+...+++.+ ++++.++++.+.+++
T Consensus 408 nL~~~TPH~a~~~~~s~-~~qa~~ai~~~~~g~ 439 (494)
T 3ce6_A 408 NLGNATGHPSFVMSNSF-ANQTIAQIELWTKND 439 (494)
T ss_dssp HHHHSCCSCHHHHHHHH-HHHHHHHHHHHHTGG
T ss_pred eccCCCCCccccchHHH-HHHHHHHHHHHHcCC
Confidence 222333444 678899999988765
No 73
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.04 E-value=0.00011 Score=49.62 Aligned_cols=97 Identities=9% Similarity=0.008 Sum_probs=63.9
Q ss_pred CcEEEEcc---cChH--H-HHHHHhhccCCcEEEEEecCC-Cccc--cChhhhhhcCeeEEeEeccC-CCHHHHHHHHHc
Q psy12355 1 MMLYLDPL---GTEN--C-LTLGINVTKMGGKLMLVGMGP-QMVS--VPLVNACAKEIDILSCFRYV-NDYPDALEMVAS 70 (112)
Q Consensus 1 ~D~v~d~~---g~~~--~-~~~~~~~l~~~G~iv~~g~~~-~~~~--~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~ 70 (112)
+|++++|+ |.+. . ....++.++++|.++.+|... +..+ .+...+..+++++.|+...+ ...+++.+++.+
T Consensus 258 aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~~~~~~a~~l~~~ 337 (384)
T 1l7d_A 258 TDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAK 337 (384)
T ss_dssp CSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGGGGHHHHHHHHHH
T ss_pred CCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcchhHHHHHHHHHH
Confidence 59999999 5322 2 367899999999999999643 2332 24445667889999987665 446678999988
Q ss_pred CCCCCcccee-e---eeCcccHHHHHHHHhc
Q psy12355 71 GKCPVRKLIT-H---NFKLEEAVEAFKTASK 97 (112)
Q Consensus 71 g~~~~~~~~~-~---~~~l~~~~~a~~~~~~ 97 (112)
+.+++-..+. . .+.++.-.++++....
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 368 (384)
T 1l7d_A 338 NLLNFLTPHVDKDTKTLVMKLEDETVSGTCV 368 (384)
T ss_dssp HHHHHHGGGEETTTTEECCCTTCHHHHHHEE
T ss_pred hHHHHHHHHHhCCcchhhccccCHHHhcCeE
Confidence 8765432222 1 3444545556655433
No 74
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.77 E-value=0.00076 Score=45.21 Aligned_cols=71 Identities=8% Similarity=0.009 Sum_probs=51.6
Q ss_pred CcEEEEcccChHH------HHHHHhhccCCcEEEEEecCCC-------ccccChhhhhhcCeeEEeEeccC---------
Q psy12355 1 MMLYLDPLGTENC------LTLGINVTKMGGKLMLVGMGPQ-------MVSVPLVNACAKEIDILSCFRYV--------- 58 (112)
Q Consensus 1 ~D~v~d~~g~~~~------~~~~~~~l~~~G~iv~~g~~~~-------~~~~~~~~~~~~~~~l~g~~~~~--------- 58 (112)
+|++++|+|.+.. ....++.++++|+++.++...+ +.+++...+..+++++.+....+
T Consensus 231 ~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~ 310 (361)
T 1pjc_A 231 ADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQ 310 (361)
T ss_dssp CSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHH
T ss_pred CCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHH
Confidence 6999999987652 5678899999999999997543 23455556778888888754211
Q ss_pred ----CCHHHHHHHHHcC
Q psy12355 59 ----NDYPDALEMVASG 71 (112)
Q Consensus 59 ----~~~~~~~~~~~~g 71 (112)
..++.+++++.+|
T Consensus 311 ~~~~~~~~~l~~l~~~G 327 (361)
T 1pjc_A 311 ALNNSTLPYVVKLANQG 327 (361)
T ss_dssp HHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 3356677888777
No 75
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.66 E-value=0.00073 Score=45.42 Aligned_cols=71 Identities=10% Similarity=0.068 Sum_probs=42.6
Q ss_pred CcEEEEcccChHH------HHHHHhhccCCcEEEEEecCCC-------ccccChhhhhhcCeeEEeEecc----------
Q psy12355 1 MMLYLDPLGTENC------LTLGINVTKMGGKLMLVGMGPQ-------MVSVPLVNACAKEIDILSCFRY---------- 57 (112)
Q Consensus 1 ~D~v~d~~g~~~~------~~~~~~~l~~~G~iv~~g~~~~-------~~~~~~~~~~~~~~~l~g~~~~---------- 57 (112)
+|++++|+|.+.. ...+++.++++|+++.+|...+ +.+++...+..+++++.+....
T Consensus 230 ~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~ 309 (369)
T 2eez_A 230 ADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTF 309 (369)
T ss_dssp CSEEEECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHH
T ss_pred CCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHH
Confidence 5999999987642 5778999999999999986543 2334444566788887775421
Q ss_pred ---CCCHHHHHHHHHcC
Q psy12355 58 ---VNDYPDALEMVASG 71 (112)
Q Consensus 58 ---~~~~~~~~~~~~~g 71 (112)
...++.+++++.+|
T Consensus 310 ~~~~~~~~~l~~l~~~g 326 (369)
T 2eez_A 310 ALTNQTLPYVLKLAEKG 326 (369)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 13456777777777
No 76
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.38 E-value=0.0036 Score=42.22 Aligned_cols=55 Identities=7% Similarity=-0.013 Sum_probs=41.1
Q ss_pred CcEEEEcccChHH------HHHHHhhccCCcEEEEEecCC-------CccccChhhhhhcCeeEEeEe
Q psy12355 1 MMLYLDPLGTENC------LTLGINVTKMGGKLMLVGMGP-------QMVSVPLVNACAKEIDILSCF 55 (112)
Q Consensus 1 ~D~v~d~~g~~~~------~~~~~~~l~~~G~iv~~g~~~-------~~~~~~~~~~~~~~~~l~g~~ 55 (112)
+|++++|++.+.+ ....++.++++|+++.+|... ++.+++...+..+++.+.+..
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~p 299 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVA 299 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBT
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecC
Confidence 5999999987654 577899999999999999643 234455555667888877654
No 77
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.07 E-value=0.0034 Score=42.71 Aligned_cols=73 Identities=3% Similarity=0.025 Sum_probs=48.4
Q ss_pred CcEEEEcccCh-----HHH-HHHHhhccCCcEEEEEecCC-CccccChh---hhhhcCeeEEeEeccCCCH-HHHHHHHH
Q psy12355 1 MMLYLDPLGTE-----NCL-TLGINVTKMGGKLMLVGMGP-QMVSVPLV---NACAKEIDILSCFRYVNDY-PDALEMVA 69 (112)
Q Consensus 1 ~D~v~d~~g~~-----~~~-~~~~~~l~~~G~iv~~g~~~-~~~~~~~~---~~~~~~~~l~g~~~~~~~~-~~~~~~~~ 69 (112)
+|++++|++.+ ..+ ...++.++++|.++.+|... +.++.... .+..+++++.|+...+..+ +++.+++.
T Consensus 256 aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~p~~~~~~a~~ll~ 335 (401)
T 1x13_A 256 VDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYG 335 (401)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCTGGGSHHHHHHHHH
T ss_pred CCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCCcccCHHHHHHHHH
Confidence 59999996332 222 57899999999999999753 33443322 2667889999877655333 34666666
Q ss_pred cCCC
Q psy12355 70 SGKC 73 (112)
Q Consensus 70 ~g~~ 73 (112)
++.+
T Consensus 336 ~~~~ 339 (401)
T 1x13_A 336 TNLV 339 (401)
T ss_dssp HHHH
T ss_pred HhHH
Confidence 5543
No 78
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=92.73 E-value=0.16 Score=31.48 Aligned_cols=32 Identities=6% Similarity=-0.108 Sum_probs=27.4
Q ss_pred CcEEEEcccCh-HHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTE-NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~-~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|+...+.+ ..+..+.+.|+++|+++....
T Consensus 159 ~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 159 FHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp BSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 58999887766 778999999999999998864
No 79
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=90.43 E-value=0.45 Score=31.21 Aligned_cols=33 Identities=3% Similarity=-0.074 Sum_probs=26.2
Q ss_pred CcEEEEcccCh---HHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTE---NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~---~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
||+|+.+...+ ..+..+.+.|+|||+++.....
T Consensus 189 FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 189 FDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp CSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred cCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 68998765443 5788899999999999987643
No 80
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=89.99 E-value=0.55 Score=28.54 Aligned_cols=34 Identities=6% Similarity=-0.163 Sum_probs=25.1
Q ss_pred CcEEEEcccCh-HHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTE-NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~-~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+|+...+.. ..+..+.+.|+++|+++......
T Consensus 123 ~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 123 PEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp CSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECSH
T ss_pred CCEEEECCcccHHHHHHHHHhcCCCcEEEEEecCc
Confidence 57888654332 26888999999999999876543
No 81
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=89.67 E-value=0.5 Score=27.54 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=24.8
Q ss_pred CcEEEEcccCh--HHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTE--NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~--~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
||+|+-..+.. ..+..+.+.|+++|+++......
T Consensus 95 ~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 95 PDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp CSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEECSH
T ss_pred CCEEEECCcccHHHHHHHHHHhcCCCCEEEEEeecc
Confidence 57888544332 37899999999999999876433
No 82
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=89.15 E-value=0.26 Score=29.33 Aligned_cols=21 Identities=14% Similarity=0.295 Sum_probs=17.4
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|++||+++..-.
T Consensus 126 ~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 126 TLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEEec
Confidence 457788999999999998754
No 83
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.64 E-value=0.21 Score=34.45 Aligned_cols=38 Identities=13% Similarity=0.147 Sum_probs=30.7
Q ss_pred CcEEEEcccChHHHH-HHHhhccCCcEEEEEecCCCccc
Q psy12355 1 MMLYLDPLGTENCLT-LGINVTKMGGKLMLVGMGPQMVS 38 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~ 38 (112)
+|+++.|+|+...+. ..++.+++++.++.+|.++..+.
T Consensus 276 ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~EId 314 (435)
T 3gvp_A 276 VDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEID 314 (435)
T ss_dssp CSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTTTBT
T ss_pred CCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCccCC
Confidence 589999998777665 78999999999999987654343
No 84
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=88.39 E-value=1.7 Score=28.42 Aligned_cols=69 Identities=13% Similarity=0.078 Sum_probs=44.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---hh----hc-CeeEEeEecc--CCCHHHHHHHHHc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---AC----AK-EIDILSCFRY--VNDYPDALEMVAS 70 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~~----~~-~~~l~g~~~~--~~~~~~~~~~~~~ 70 (112)
+|+|+.|++.......+..+++.| +-+++ .++...+..+ +. .+ +..+...... ...+..+.+++.+
T Consensus 72 ~D~V~i~tp~~~h~~~~~~al~~G-~~v~~---eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~ 147 (346)
T 3cea_A 72 IDAIFIVAPTPFHPEMTIYAMNAG-LNVFC---EKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDN 147 (346)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHT
T ss_pred CCEEEEeCChHhHHHHHHHHHHCC-CEEEE---cCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHc
Confidence 589999998887788888888875 44444 2233333322 22 34 5555433332 3568889999999
Q ss_pred CCC
Q psy12355 71 GKC 73 (112)
Q Consensus 71 g~~ 73 (112)
|.+
T Consensus 148 g~i 150 (346)
T 3cea_A 148 GDI 150 (346)
T ss_dssp TTT
T ss_pred CCC
Confidence 876
No 85
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.24 E-value=0.13 Score=29.47 Aligned_cols=33 Identities=9% Similarity=0.061 Sum_probs=23.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+|+.|+|.+..+.. .+.+++++.++.+|.+.
T Consensus 81 ~Divi~at~~~~~~~~-~~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 81 NDVIITATSSKTPIVE-ERSLMPGKLFIDLGNPP 113 (144)
T ss_dssp CSEEEECSCCSSCSBC-GGGCCTTCEEEECCSSC
T ss_pred CCEEEEeCCCCCcEee-HHHcCCCCEEEEccCCc
Confidence 5888888887643322 36788888888887654
No 86
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=88.21 E-value=0.69 Score=27.79 Aligned_cols=33 Identities=12% Similarity=-0.092 Sum_probs=25.1
Q ss_pred CcEEEEccc---ChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLG---TENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g---~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+|+...+ ....+..+.+.|+++|+++.....
T Consensus 109 ~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 109 PDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 578886543 245688899999999999987643
No 87
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=86.48 E-value=0.25 Score=31.15 Aligned_cols=31 Identities=16% Similarity=0.010 Sum_probs=24.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|+. ...+..+..+.+.|++||+++....
T Consensus 149 fD~v~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 149 MDAIIR-IYAPCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp EEEEEE-ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEE-eCChhhHHHHHHhcCCCcEEEEEEc
Confidence 477774 4556678999999999999998764
No 88
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=85.68 E-value=0.23 Score=30.49 Aligned_cols=32 Identities=9% Similarity=0.006 Sum_probs=25.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
||+|+...+....+..+.+.|+++|+++..-.
T Consensus 163 fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 163 FDAIHVGASASELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp EEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred cCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence 57787766566667888999999999987743
No 89
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=85.30 E-value=0.24 Score=30.02 Aligned_cols=31 Identities=19% Similarity=0.055 Sum_probs=23.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+.+.+.......+.+.|+++|+++..-
T Consensus 147 fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 147 YDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp EEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred eeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence 5788876655555577899999999998774
No 90
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=84.34 E-value=0.9 Score=28.45 Aligned_cols=32 Identities=9% Similarity=0.104 Sum_probs=22.3
Q ss_pred CcEEEEccc---ChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLG---TENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g---~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
||+|+-... ....+..+.+.|++||.++.-..
T Consensus 137 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 137 FDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred eEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 577773221 23468888999999999887643
No 91
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=84.32 E-value=0.29 Score=30.11 Aligned_cols=31 Identities=19% Similarity=0.064 Sum_probs=24.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+...+.......+.+.|++||+++..-
T Consensus 164 fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 164 YNAIHVGAAAPDTPTELINQLASGGRLIVPV 194 (227)
T ss_dssp EEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence 5778766655566688999999999988763
No 92
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=83.79 E-value=0.31 Score=29.83 Aligned_cols=31 Identities=19% Similarity=0.038 Sum_probs=23.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+...+....+..+.+.|++||+++..-
T Consensus 152 fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 152 YDAIHVGAAAPVVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred cCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence 4777765555566788999999999998764
No 93
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=83.42 E-value=0.97 Score=30.03 Aligned_cols=34 Identities=9% Similarity=0.077 Sum_probs=28.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+||+|+|.....+.+-+.++.|.+.+.++.+.
T Consensus 92 vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~ 125 (335)
T 1u8f_O 92 AEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS 125 (335)
T ss_dssp CCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred CCEEEECCCchhhHHHHHHHHhCCCeEEEeccCC
Confidence 5999999998877888888888877999988764
No 94
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=83.14 E-value=1.3 Score=25.32 Aligned_cols=23 Identities=17% Similarity=0.205 Sum_probs=18.5
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.+.|+++|+++......
T Consensus 117 ~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 117 LALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHHHHHHHHEEEEEEEEEEEESS
T ss_pred HHHHHHHHHcCCCcEEEEEEecC
Confidence 56788889999999999876443
No 95
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=83.09 E-value=0.83 Score=28.36 Aligned_cols=32 Identities=13% Similarity=-0.242 Sum_probs=24.8
Q ss_pred CcEEEEcccCh-HHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTE-NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~-~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|+-..+.+ ..+..+.++|+++|+++.+..
T Consensus 167 ~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 167 YDGVALDLMEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp EEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 47777655554 678889999999999998763
No 96
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=82.78 E-value=0.36 Score=29.87 Aligned_cols=31 Identities=23% Similarity=0.243 Sum_probs=23.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+.+.+.......+.+.|++||+++..-
T Consensus 159 fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 159 YDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp EEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence 4788876655555577899999999988764
No 97
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=82.67 E-value=1 Score=30.06 Aligned_cols=34 Identities=15% Similarity=0.021 Sum_probs=29.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+||+|+|...+.+.+-..++.|.+.+.++.+.
T Consensus 92 vDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~ 125 (337)
T 1rm4_O 92 IDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG 125 (337)
T ss_dssp CCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCC
T ss_pred CCEEEECCCchhhHHHHHHHHHcCCEEEEECCcc
Confidence 5999999998777788888899899999998654
No 98
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=82.62 E-value=0.33 Score=29.33 Aligned_cols=31 Identities=16% Similarity=0.049 Sum_probs=23.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+...+.......+.+.|++||+++..-
T Consensus 144 ~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 144 FDAIIVTAAPPEIPTALMTQLDEGGILVLPV 174 (210)
T ss_dssp EEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred ccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence 5778876555554567889999999988763
No 99
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=82.58 E-value=0.86 Score=31.50 Aligned_cols=53 Identities=8% Similarity=0.080 Sum_probs=37.6
Q ss_pred CcEEEEcccChHHHH-HHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEe
Q psy12355 1 MMLYLDPLGTENCLT-LGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCF 55 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~ 55 (112)
+|+++.+++....+. ..++.+++++.++.+|- .+.+++...+..+..+..++.
T Consensus 267 ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgR--g~vEID~~~L~~~~~~~~~ir 320 (436)
T 3h9u_A 267 AHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGH--FDTEIQVAWLKANAKERVEVK 320 (436)
T ss_dssp CSEEEECSSCSCSBCTTTGGGCCTTEEEEECSS--SGGGBCHHHHHHHCSEEEEEE
T ss_pred CCEEEECCCCcCccCHHHHhhcCCCcEEEEeCC--CCCccCHHHHHhhcCceEeec
Confidence 589998887765444 57889999999999973 345677776666555555443
No 100
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=81.54 E-value=0.85 Score=28.04 Aligned_cols=30 Identities=7% Similarity=0.101 Sum_probs=22.4
Q ss_pred CcEEEEcccC---hHHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGT---ENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~---~~~~~~~~~~l~~~G~iv~~ 30 (112)
||+|+...+. ...+..+.+.|++||+++..
T Consensus 127 fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 127 FDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 4777754433 35678899999999999886
No 101
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=81.26 E-value=1.1 Score=28.37 Aligned_cols=32 Identities=16% Similarity=0.037 Sum_probs=24.8
Q ss_pred CcEEEEcccCh-HHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTE-NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~-~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|+-..+.+ ..+..+.+.|+++|+++.+..
T Consensus 172 ~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 172 VDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp EEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred eeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 47777655554 678889999999999998764
No 102
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=80.93 E-value=1.3 Score=25.90 Aligned_cols=20 Identities=25% Similarity=0.285 Sum_probs=17.3
Q ss_pred hHHHHHHHhhccCCcEEEEE
Q psy12355 11 ENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~ 30 (112)
...+..+.++|+|||+++..
T Consensus 81 ~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 81 AEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEE
Confidence 45788899999999999984
No 103
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=80.88 E-value=1.3 Score=27.51 Aligned_cols=31 Identities=13% Similarity=0.066 Sum_probs=24.3
Q ss_pred CcEEEEcccCh-HHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTE-NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~-~~~~~~~~~l~~~G~iv~~g 31 (112)
+|+|+-..+.+ ..+..+.++|+++|+++.+.
T Consensus 163 ~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 163 VDHVILDLPQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp EEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 47777655554 37899999999999999875
No 104
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=80.85 E-value=1 Score=27.82 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=22.7
Q ss_pred CcEEEEcccCh---HHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTE---NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~---~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+...+.. ..+..+.+.|++||+++..-
T Consensus 148 fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 148 IDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 47777654333 45788899999999999753
No 105
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=80.69 E-value=1.5 Score=30.07 Aligned_cols=71 Identities=7% Similarity=-0.052 Sum_probs=44.4
Q ss_pred CcEEEEcccChH------HHHHHHhhccCCcEEEEEecCC-Ccccc--ChhhhhhcCeeEEeEeccC-CCHHHHHHHHHc
Q psy12355 1 MMLYLDPLGTEN------CLTLGINVTKMGGKLMLVGMGP-QMVSV--PLVNACAKEIDILSCFRYV-NDYPDALEMVAS 70 (112)
Q Consensus 1 ~D~v~d~~g~~~------~~~~~~~~l~~~G~iv~~g~~~-~~~~~--~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~ 70 (112)
+|++|.|+..+. .-...++.+++|+.++.++... +..+. +...+..+++++.+....+ ...++...++.+
T Consensus 276 aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nlP~~vp~tAS~~ls~ 355 (405)
T 4dio_A 276 QDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNVAGRIAASASLLYAK 355 (405)
T ss_dssp CSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSGGGGGHHHHHHHHHH
T ss_pred CCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCCCccCHHHHHHHHHH
Confidence 599999864331 2467899999999999998533 33322 1122345678888877654 445555555544
Q ss_pred C
Q psy12355 71 G 71 (112)
Q Consensus 71 g 71 (112)
.
T Consensus 356 ~ 356 (405)
T 4dio_A 356 N 356 (405)
T ss_dssp H
T ss_pred H
Confidence 4
No 106
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=80.69 E-value=1.1 Score=28.34 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=24.9
Q ss_pred CcEEEEcccCh-HHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTE-NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~-~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|+-..+.+ ..+..+.++|+++|+++....
T Consensus 182 ~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 182 VDALFLDVPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp EEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 47777655555 678889999999999998753
No 107
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=80.49 E-value=1.1 Score=29.71 Aligned_cols=34 Identities=9% Similarity=-0.042 Sum_probs=28.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+||+|+|...+.+.+-..++.|.+.+.++.+.
T Consensus 89 vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 89 VDVVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (330)
T ss_dssp CSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred CCEEEECCCccccHHHHHHHHHCCCEEEEECCCC
Confidence 5999999998777788888888898989888654
No 108
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=80.48 E-value=1.6 Score=26.94 Aligned_cols=29 Identities=14% Similarity=-0.033 Sum_probs=20.5
Q ss_pred CcEEE-EcccChHHHHHHHhhccCCcEEEE
Q psy12355 1 MMLYL-DPLGTENCLTLGINVTKMGGKLML 29 (112)
Q Consensus 1 ~D~v~-d~~g~~~~~~~~~~~l~~~G~iv~ 29 (112)
||+|| |+--....+..+++.+++||.|+.
T Consensus 123 fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 123 PDVVLVDGRFRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp CSEEEECSSSHHHHHHHHHHHCSSCEEEEE
T ss_pred CCEEEEeCCCchhHHHHHHHhcCCCeEEEE
Confidence 57777 442124667778999999999844
No 109
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=80.09 E-value=1.4 Score=27.09 Aligned_cols=30 Identities=13% Similarity=0.096 Sum_probs=22.4
Q ss_pred CcEEEEcccCh----HHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTE----NCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~----~~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|+.....+ ..+..+.+.|+++|+++..
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 47777554444 3478888899999999986
No 110
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=79.92 E-value=1.2 Score=26.44 Aligned_cols=22 Identities=18% Similarity=0.252 Sum_probs=18.3
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+.+.|+++|+++.....
T Consensus 120 ~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 120 QALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp HHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHhCcCCCEEEEEEcc
Confidence 4688899999999999987643
No 111
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=79.77 E-value=1.5 Score=29.28 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=27.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+||+|+|...+.+.+-..++.|.+-+.+..+.
T Consensus 93 vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 93 VDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp CSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred CCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 5999999998777788888888888866665544
No 112
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=79.73 E-value=1.8 Score=29.32 Aligned_cols=34 Identities=0% Similarity=0.063 Sum_probs=24.0
Q ss_pred CcEEEEcccChHHHH--HHHhh--c--cCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLT--LGINV--T--KMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~--~~~~~--l--~~~G~iv~~g~~~ 34 (112)
+|+|++|+|.+..+. ..++. + +++|+++.++...
T Consensus 228 aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 228 SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 699999998765432 45665 3 6688888888654
No 113
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=79.54 E-value=2 Score=28.71 Aligned_cols=35 Identities=11% Similarity=0.059 Sum_probs=28.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ 35 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~ 35 (112)
+|+|++|+|.-.+.+.+-..++.|.+-+.+..+..
T Consensus 94 vDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~ 128 (337)
T 3v1y_O 94 AEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK 128 (337)
T ss_dssp CCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCS
T ss_pred CcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC
Confidence 58999999987778888888998888788876543
No 114
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=79.38 E-value=1.2 Score=29.01 Aligned_cols=23 Identities=22% Similarity=0.433 Sum_probs=19.8
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+.++.++|++|||++++..+.
T Consensus 214 ~~L~~a~~~L~~gGrl~visfHS 236 (285)
T 1wg8_A 214 EFLEQAAEVLAPGGRLVVIAFHS 236 (285)
T ss_dssp HHHHHHHHHEEEEEEEEEEECSH
T ss_pred HHHHHHHHHhcCCCEEEEEecCc
Confidence 36788999999999999998654
No 115
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=78.72 E-value=2.3 Score=28.33 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=28.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ 35 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~ 35 (112)
+|+|++|+|.-.+.+.+-..++.|.+-+.+..+..
T Consensus 90 vDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~ 124 (332)
T 3pym_A 90 VDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSS 124 (332)
T ss_dssp CSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCS
T ss_pred ccEEEEecccccCHHHHHHHHHcCCCEEEECCCCC
Confidence 58999999987778888888988888777776543
No 116
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=77.97 E-value=1.4 Score=26.48 Aligned_cols=20 Identities=15% Similarity=0.484 Sum_probs=15.8
Q ss_pred HHHHHHhhccCCcEEEEEec
Q psy12355 13 CLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~ 32 (112)
.+..+.+.|+|||+++.--.
T Consensus 121 ~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 121 VMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHccCCCEEEEEEc
Confidence 46677899999999986543
No 117
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=77.88 E-value=1.4 Score=29.53 Aligned_cols=23 Identities=26% Similarity=0.507 Sum_probs=19.9
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+.++.++|++|||++++.++.
T Consensus 255 ~~L~~a~~~L~~gGRl~VISFHS 277 (347)
T 3tka_A 255 QALKSSLNVLAPGGRLSIISFHS 277 (347)
T ss_dssp HHHHHHHHHEEEEEEEEEEESSH
T ss_pred HHHHHHHHHhCCCCEEEEEecCc
Confidence 36888999999999999998754
No 118
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=77.25 E-value=9.1 Score=25.14 Aligned_cols=69 Identities=16% Similarity=0.139 Sum_probs=43.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh------h-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN------A-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~------~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+.++++.| +-|++ .+++..+..+ + -.++..+.-... +...++.+-+++.+|
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~---EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g 141 (349)
T 3i23_A 66 IELITICTPAHTHYDLAKQAILAG-KSVIV---EKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQG 141 (349)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHT
T ss_pred CCEEEEeCCcHHHHHHHHHHHHcC-CEEEE---ECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcC
Confidence 589999998877788888888866 44444 4444444322 1 223444433332 336688888899888
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 142 ~i 143 (349)
T 3i23_A 142 FL 143 (349)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 119
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=77.15 E-value=0.71 Score=28.24 Aligned_cols=32 Identities=16% Similarity=-0.068 Sum_probs=23.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
||+|+...........+.+.|++||+++..-.
T Consensus 135 fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 135 YDRVVVWATAPTLLCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence 47777654444445678899999999987743
No 120
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=76.71 E-value=1.7 Score=30.27 Aligned_cols=34 Identities=9% Similarity=-0.029 Sum_probs=28.4
Q ss_pred CcEEEEcccChHHH-HHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCL-TLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~-~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+++.++|+...+ ...++.+++++.++.+|-++
T Consensus 303 ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 303 ADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp CSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred CCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence 59999999876654 57899999999999998655
No 121
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=76.35 E-value=3.4 Score=26.58 Aligned_cols=50 Identities=8% Similarity=-0.024 Sum_probs=31.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDIL 52 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~ 52 (112)
+|+|+.+++....-...++.+++++.++.++..+....+ ......++.+.
T Consensus 214 aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~ 263 (293)
T 3d4o_A 214 VDVCINTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKAL 263 (293)
T ss_dssp CSEEEECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred CCEEEECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEE
Confidence 589999987543224577889999999999864433333 33334455443
No 122
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=76.13 E-value=11 Score=24.43 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=41.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-+++ .++...+..+ + -.++..+.-... +...++.+.+++.+|
T Consensus 63 ~D~V~i~tp~~~h~~~~~~al~~G-k~v~~---ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g 138 (332)
T 2glx_A 63 VDAVYVSTTNELHREQTLAAIRAG-KHVLC---EKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEG 138 (332)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTT
T ss_pred CCEEEEeCChhHhHHHHHHHHHCC-CeEEE---eCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcC
Confidence 589999998777677777788765 44444 2233333221 2 123444333322 335688888899888
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 139 ~i 140 (332)
T 2glx_A 139 RI 140 (332)
T ss_dssp TT
T ss_pred CC
Confidence 66
No 123
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=75.36 E-value=2.3 Score=25.88 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=21.5
Q ss_pred CcEEEEcccCh----HHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTE----NCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~----~~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|+-....+ ..+..+.+.|++||+++..
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 46777444333 2278889999999999887
No 124
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=75.30 E-value=3.6 Score=27.33 Aligned_cols=34 Identities=6% Similarity=-0.066 Sum_probs=27.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+|++|+|...+...+-.+++.|-+.+..+.+.
T Consensus 78 vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~ 111 (340)
T 1b7g_O 78 SDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEK 111 (340)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred CCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCC
Confidence 5999999998777777777777777888887653
No 125
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=75.25 E-value=1.7 Score=28.58 Aligned_cols=30 Identities=10% Similarity=0.129 Sum_probs=24.9
Q ss_pred CcEEEEcccChHHHHHHHhhccC--CcEEEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKM--GGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~--~G~iv~~ 30 (112)
+|+|++|+|.......+..+++. |.+++..
T Consensus 72 iDvV~~atp~~~h~~~a~~al~a~~Gk~Vi~e 103 (312)
T 1nvm_B 72 IDFVFDATSASAHVQNEALLRQAKPGIRLIDL 103 (312)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred CcEEEECCChHHHHHHHHHHHHhCCCCEEEEc
Confidence 48999999977778888889988 8887774
No 126
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=75.01 E-value=11 Score=24.80 Aligned_cols=69 Identities=7% Similarity=-0.020 Sum_probs=45.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++...-.+.+..+|+. |+=|++ .+|+..+..+ + -.++..+.-... +...++++-+++.+|
T Consensus 95 iDaV~IatP~~~H~~~a~~al~a-GkhVl~---EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G 170 (393)
T 4fb5_A 95 VDVVSVTTPNQFHAEMAIAALEA-GKHVWC---EKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDG 170 (393)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHT-TCEEEE---CSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTT
T ss_pred CcEEEECCChHHHHHHHHHHHhc-CCeEEE---ccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcC
Confidence 58999999887777888888876 555555 4555554432 2 233443333332 336788899999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 171 ~i 172 (393)
T 4fb5_A 171 VI 172 (393)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 127
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=74.90 E-value=0.81 Score=28.06 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=24.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
||+|+-.......+..+.+.|+|||+++..+.
T Consensus 112 fD~v~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (226)
T 3m33_A 112 FGLIVSRRGPTSVILRLPELAAPDAHFLYVGP 143 (226)
T ss_dssp EEEEEEESCCSGGGGGHHHHEEEEEEEEEEES
T ss_pred EEEEEeCCCHHHHHHHHHHHcCCCcEEEEeCC
Confidence 47777655455678889999999999995543
No 128
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=74.90 E-value=3.6 Score=24.90 Aligned_cols=31 Identities=3% Similarity=0.073 Sum_probs=21.6
Q ss_pred CcEEEEccc---ChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLG---TENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g---~~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-... ....+..+.+.|++||.++.-.
T Consensus 134 fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 134 FDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred cCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 577773221 1346788889999999888754
No 129
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=74.82 E-value=2.5 Score=28.01 Aligned_cols=33 Identities=12% Similarity=0.015 Sum_probs=26.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+||+|+|...+.+.+-..+..|.+++..+..
T Consensus 62 ~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~ 94 (331)
T 2yv3_A 62 VDLVLASAGGGISRAKALVWAEGGALVVDNSSA 94 (331)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTTCEEEECSSS
T ss_pred CCEEEECCCccchHHHHHHHHHCCCEEEECCCc
Confidence 599999999877777777788888888888754
No 130
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=74.55 E-value=1.2 Score=31.28 Aligned_cols=35 Identities=11% Similarity=0.201 Sum_probs=28.7
Q ss_pred CcEEEEcccChHHHHH-HHhhccCCcEEEEEecCCC
Q psy12355 1 MMLYLDPLGTENCLTL-GINVTKMGGKLMLVGMGPQ 35 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~-~~~~l~~~G~iv~~g~~~~ 35 (112)
+|+++++.|....+.. .++.+++++.++.+|.+..
T Consensus 321 aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~~~ 356 (488)
T 3ond_A 321 ADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDN 356 (488)
T ss_dssp CSEEEECSSCSCSBCHHHHTTSCTTEEEEESSSTTT
T ss_pred cCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCCCc
Confidence 5899999988776644 8999999999999997643
No 131
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=74.47 E-value=1.8 Score=25.78 Aligned_cols=24 Identities=17% Similarity=0.245 Sum_probs=19.1
Q ss_pred hHHHHHHHhhccCCcEEEEEecCC
Q psy12355 11 ENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
...+..+.+.|+++|+++......
T Consensus 139 ~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 139 DQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHhCcCCCEEEEEeCCC
Confidence 346788889999999999887544
No 132
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=74.34 E-value=3.6 Score=26.47 Aligned_cols=32 Identities=9% Similarity=0.237 Sum_probs=23.3
Q ss_pred CcEEEEc-----ccC---hHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDP-----LGT---ENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~-----~g~---~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
||+|+.. .+. ...+..+.++|+|||++++...
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 5777754 321 3467888899999999998754
No 133
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=74.33 E-value=1.4 Score=25.81 Aligned_cols=21 Identities=14% Similarity=0.256 Sum_probs=16.7
Q ss_pred HHHHHHhhccCCcEEEEEecC
Q psy12355 13 CLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~~ 33 (112)
.+..+.+.|+|||+++.+..+
T Consensus 117 ~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 117 AIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp HHHHHHHHEEEEEEEEEEEC-
T ss_pred HHHHHHHhcCCCcEEEEEEeC
Confidence 457788999999999988654
No 134
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=74.33 E-value=2.9 Score=26.36 Aligned_cols=31 Identities=3% Similarity=-0.045 Sum_probs=21.3
Q ss_pred CcEEEEcccC--------hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGT--------ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~--------~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|++...- ...+....++|+|||+++++.
T Consensus 153 FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 153 FDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp EEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 5788864211 124677889999999997654
No 135
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=73.98 E-value=3 Score=27.91 Aligned_cols=35 Identities=9% Similarity=0.065 Sum_probs=27.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ 35 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~ 35 (112)
+|+|++|+|...+.+.+-..++.|.+-+.+..+..
T Consensus 90 vDiV~estG~~~s~e~a~~hl~aGakkVvisaps~ 124 (342)
T 2ep7_A 90 VDVVIEATGVFRDRENASKHLQGGAKKVIITAPAK 124 (342)
T ss_dssp CSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCB
T ss_pred CCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCC
Confidence 58999999987777888888888877777766543
No 136
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=73.71 E-value=13 Score=24.31 Aligned_cols=69 Identities=12% Similarity=0.223 Sum_probs=44.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++...-.+.+..+++. |+=|++ .+|+..+..+ + -.++..+.-... +...++++-+++.+|
T Consensus 87 iDaV~I~tP~~~H~~~~~~al~a-GkhVl~---EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G 162 (350)
T 4had_A 87 IDAVYIPLPTSQHIEWSIKAADA-GKHVVC---EKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEG 162 (350)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHT-TCEEEE---CSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCchhHHHHHHHHhc-CCEEEE---eCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcC
Confidence 58999999887777888888876 555555 4444444322 2 123444333332 346788888999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 163 ~i 164 (350)
T 4had_A 163 AI 164 (350)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 137
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=73.39 E-value=1.8 Score=26.74 Aligned_cols=31 Identities=19% Similarity=0.371 Sum_probs=21.2
Q ss_pred CcEEE-Eccc--ChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYL-DPLG--TENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~-d~~g--~~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+ |+.. ....+..+.+.|++||.++.-.
T Consensus 149 fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 149 FDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred cCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 46776 3321 1345788889999999998753
No 138
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=73.03 E-value=4.9 Score=26.13 Aligned_cols=69 Identities=7% Similarity=0.134 Sum_probs=42.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh------hh-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV------NA-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|-. +++- +++..+.. .. -.++..+..... +...++.+.+++.+|
T Consensus 64 ~D~V~i~tp~~~h~~~~~~al~~gk~-v~~E---KP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g 139 (331)
T 4hkt_A 64 IDAVVICTPTDTHADLIERFARAGKA-IFCE---KPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDG 139 (331)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCE-EEEC---SCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTT
T ss_pred CCEEEEeCCchhHHHHHHHHHHcCCc-EEEe---cCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcC
Confidence 58999999887777878888877644 4442 22222222 12 233444443332 336788889999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 140 ~i 141 (331)
T 4hkt_A 140 RI 141 (331)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 139
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=72.96 E-value=2.7 Score=26.47 Aligned_cols=30 Identities=7% Similarity=0.046 Sum_probs=20.8
Q ss_pred CcEEEEcccCh----HHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTE----NCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~----~~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|+-....+ ..+..+.+.|+|||++++.
T Consensus 148 vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 148 VDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 46666544333 2566778899999998875
No 140
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=72.85 E-value=3.8 Score=24.27 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=24.2
Q ss_pred CcEEEEccc------ChHHHHHHHhhccCCcEEEEEecCCC
Q psy12355 1 MMLYLDPLG------TENCLTLGINVTKMGGKLMLVGMGPQ 35 (112)
Q Consensus 1 ~D~v~d~~g------~~~~~~~~~~~l~~~G~iv~~g~~~~ 35 (112)
+|+|+.+.. ....+..+.+.|+++|+++.......
T Consensus 95 fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 95 WEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp CSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred ccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 577775321 12457778899999999998865443
No 141
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=72.78 E-value=7.8 Score=25.53 Aligned_cols=69 Identities=12% Similarity=0.061 Sum_probs=43.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh------h-hhhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV------N-ACAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~-~~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|-. |++- +++..+.. . .-.++..+.-.+. +...++.+-+++.+|
T Consensus 90 ~D~V~i~tp~~~h~~~~~~al~aGk~-Vl~E---KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G 165 (350)
T 3rc1_A 90 VDAVYVPLPAVLHAEWIDRALRAGKH-VLAE---KPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEG 165 (350)
T ss_dssp CSEEEECCCGGGHHHHHHHHHHTTCE-EEEE---SSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTT
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCc-EEEe---CCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcC
Confidence 58999999888777888888876644 4442 23333322 1 2234444443333 347788899999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 166 ~i 167 (350)
T 3rc1_A 166 VI 167 (350)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 142
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=72.43 E-value=3.3 Score=25.16 Aligned_cols=20 Identities=25% Similarity=0.296 Sum_probs=16.5
Q ss_pred hHHHHHHHhhccCCcEEEEE
Q psy12355 11 ENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~ 30 (112)
...+..+.+.|++||+++.+
T Consensus 159 ~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 159 VKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp HHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEE
Confidence 34678888999999999886
No 143
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=72.20 E-value=2.3 Score=27.82 Aligned_cols=32 Identities=13% Similarity=-0.080 Sum_probs=23.3
Q ss_pred CcEEEEcccCh-HHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTE-NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~-~~~~~~~~~l~~~G~iv~~g~ 32 (112)
||+|+-..+.+ ..+..+.++|++||+++.+..
T Consensus 188 fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 188 FDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred eeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 46666444343 458889999999999997753
No 144
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=72.12 E-value=3.1 Score=28.26 Aligned_cols=34 Identities=15% Similarity=0.109 Sum_probs=26.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+||+|+|...+.+.+-..++.|.+-|++..+.
T Consensus 92 vDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps 125 (380)
T 2d2i_A 92 IDLVIESTGVFVTAEGASKHIQAGAKKVLITAPG 125 (380)
T ss_dssp CCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCC
T ss_pred CCEEEECCCccccHHHHHHHHHcCCcEEEEcCCC
Confidence 5999999998777777888888888866665543
No 145
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=71.96 E-value=4.3 Score=27.56 Aligned_cols=58 Identities=7% Similarity=-0.010 Sum_probs=36.5
Q ss_pred CcEEEEcccChH------HHHHHHhhccCCcEEEEEecCCC-cccc--ChhhhhhcCeeEEeEeccC
Q psy12355 1 MMLYLDPLGTEN------CLTLGINVTKMGGKLMLVGMGPQ-MVSV--PLVNACAKEIDILSCFRYV 58 (112)
Q Consensus 1 ~D~v~d~~g~~~------~~~~~~~~l~~~G~iv~~g~~~~-~~~~--~~~~~~~~~~~l~g~~~~~ 58 (112)
+|+|+.|+..+. .-...++.+++++.++.++...+ ..+. +.......++++.+....+
T Consensus 266 aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~nlP 332 (381)
T 3p2y_A 266 FDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLNLP 332 (381)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSCTG
T ss_pred CCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCCCc
Confidence 599999863321 23678999999999999986443 3221 1112334567777665433
No 146
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=71.93 E-value=3.2 Score=27.68 Aligned_cols=34 Identities=15% Similarity=0.109 Sum_probs=26.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+||+|+|...+.+.+-..++.|.+-|.+..+.
T Consensus 92 vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~ 125 (339)
T 3b1j_A 92 IDLVIESTGVFVTAEGASKHIQAGAKKVLITAPG 125 (339)
T ss_dssp CCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCC
T ss_pred CCEEEECCCccccHHHHHHHHHcCCcEEEEeCCC
Confidence 5999999998777777778888888866665443
No 147
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=71.72 E-value=15 Score=24.05 Aligned_cols=69 Identities=16% Similarity=0.215 Sum_probs=42.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh------h-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN------A-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~------~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-|++ .+++..+..+ . -.++..+..... +...++.+-+++.+|
T Consensus 68 vD~V~i~tp~~~H~~~~~~al~aG-khV~~---EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g 143 (352)
T 3kux_A 68 IDLIVIPTPNDTHFPLAQSALAAG-KHVVV---DKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEG 143 (352)
T ss_dssp CCEEEECSCTTTHHHHHHHHHHTT-CEEEE---CSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHT
T ss_pred CCEEEEeCChHHHHHHHHHHHHCC-CcEEE---ECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhcC
Confidence 589999998877778888888776 44444 3333333321 1 223444333332 336678888889888
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 144 ~i 145 (352)
T 3kux_A 144 SL 145 (352)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 148
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=71.68 E-value=2.6 Score=26.17 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=22.2
Q ss_pred CcEEEEcccC------hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGT------ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~------~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-.... ...+..+.++|+|||+++...
T Consensus 104 fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 104 FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 4666643221 256888999999999999864
No 149
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=71.48 E-value=3.2 Score=27.71 Aligned_cols=34 Identities=15% Similarity=0.088 Sum_probs=28.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+|++|+|.-.+.+.+-..++.|.+-+.+..+.
T Consensus 92 vDiVlesTG~f~s~e~a~~hl~aGAkkViISaps 125 (338)
T 3lvf_P 92 IDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA 125 (338)
T ss_dssp CSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCC
T ss_pred CCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCC
Confidence 5899999998777888888898888877777654
No 150
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=71.37 E-value=5 Score=25.88 Aligned_cols=50 Identities=8% Similarity=0.007 Sum_probs=31.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDIL 52 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~ 52 (112)
+|+|+.+++....-...++.+++++.++.++.......+ .....++..+.
T Consensus 216 aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i 265 (300)
T 2rir_A 216 IDICINTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKAL 265 (300)
T ss_dssp CSEEEECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred CCEEEECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEE
Confidence 589999987643224567889999999999864433333 23333444443
No 151
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=71.33 E-value=3 Score=25.40 Aligned_cols=30 Identities=13% Similarity=0.153 Sum_probs=20.3
Q ss_pred CcEEEEcccChH----HHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTEN----CLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~~----~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|+-....+. .+..+.+.|+|||+++..
T Consensus 127 fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 127 VDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 466664432221 256788899999999887
No 152
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=70.98 E-value=5 Score=25.30 Aligned_cols=21 Identities=14% Similarity=0.290 Sum_probs=17.4
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.++|+|||++++...
T Consensus 149 ~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 149 AFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp HHHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEEe
Confidence 467888999999999987653
No 153
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=70.81 E-value=4.1 Score=27.48 Aligned_cols=34 Identities=6% Similarity=0.095 Sum_probs=28.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+|++|+|.-.+.+.+-..++.|.+-|.+..+.
T Consensus 104 vDiVlesTG~f~s~e~A~~hl~aGAkkViISaps 137 (359)
T 3ids_C 104 VEYVIESTGLFTAKAAAEGHLRGGARKVVISAPA 137 (359)
T ss_dssp CCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCC
T ss_pred ccEEEEeccccCCHHHHHHHHHcCCCEEEECCCC
Confidence 5899999998777788888888888877777654
No 154
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=70.64 E-value=16 Score=24.07 Aligned_cols=69 Identities=9% Similarity=0.131 Sum_probs=43.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|=. |++ .+++..+..+ + -.++..+.-... +...++.+-+++.+|
T Consensus 66 vD~V~i~tp~~~H~~~~~~al~aGkh-Vl~---EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g 141 (358)
T 3gdo_A 66 IELVIVTTPSGLHYEHTMACIQAGKH-VVM---EKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLISEG 141 (358)
T ss_dssp CCEEEECSCTTTHHHHHHHHHHTTCE-EEE---ESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTT
T ss_pred CCEEEEcCCcHHHHHHHHHHHHcCCe-EEE---ecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHHhcC
Confidence 58999999888778888888887644 444 2333333221 1 123444333332 346788888999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 142 ~i 143 (358)
T 3gdo_A 142 SL 143 (358)
T ss_dssp SS
T ss_pred CC
Confidence 76
No 155
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=70.50 E-value=2.8 Score=24.39 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=21.0
Q ss_pred CcEEEEccc---ChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLG---TENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g---~~~~~~~~~~~l~~~G~iv~~g 31 (112)
+|+|+-... ....+..+.+.|+++|+++...
T Consensus 101 ~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 466764432 1356777888899999988764
No 156
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=70.45 E-value=16 Score=24.05 Aligned_cols=69 Identities=10% Similarity=0.045 Sum_probs=43.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-|++ .+++..+..+ + -.++..+.-... +...++.+-+++.+|
T Consensus 66 vD~V~i~tp~~~H~~~~~~al~aG-khVl~---EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G 141 (362)
T 3fhl_A 66 IDLIVVNTPDNTHYEYAGMALEAG-KNVVV---EKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILAKS 141 (362)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTT-CEEEE---ESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTT
T ss_pred CCEEEEeCChHHHHHHHHHHHHCC-CeEEE---ecCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHHcC
Confidence 589999998877778888888876 44444 2333333221 2 223444433332 346788899999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 142 ~i 143 (362)
T 3fhl_A 142 LL 143 (362)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 157
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=70.31 E-value=3.3 Score=27.64 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=27.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+|++|+|.-.+.+.+-..++.|.+-+.+..+.
T Consensus 92 vDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps 125 (335)
T 3doc_A 92 VDIALECTGIFTSRDKAALHLEAGAKRVIVSAPA 125 (335)
T ss_dssp CSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred CCEEEEccCccCCHHHHHHHHHcCCCEEEECCCC
Confidence 5899999998777888888888888777776654
No 158
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=70.23 E-value=6.3 Score=25.92 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=42.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh------h-hhhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV------N-ACAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~-~~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|-. +++-- ++..+.. . .-.++..+.-... +...++++-+++.+|
T Consensus 67 ~D~V~i~tp~~~h~~~~~~al~~gk~-vl~EK---P~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g 142 (354)
T 3db2_A 67 VEMVIITVPNDKHAEVIEQCARSGKH-IYVEK---PISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTK 142 (354)
T ss_dssp CCEEEECSCTTSHHHHHHHHHHTTCE-EEEES---SSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTT
T ss_pred CCEEEEeCChHHHHHHHHHHHHcCCE-EEEcc---CCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcC
Confidence 58999999887777878888877654 44422 2222221 1 1223444433332 346788888999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 143 ~i 144 (354)
T 3db2_A 143 EI 144 (354)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 159
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=70.20 E-value=6.3 Score=23.43 Aligned_cols=29 Identities=17% Similarity=0.098 Sum_probs=25.2
Q ss_pred EEEEcccChHHHHHHHhhccCCcEEEEEe
Q psy12355 3 LYLDPLGTENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 3 ~v~d~~g~~~~~~~~~~~l~~~G~iv~~g 31 (112)
++++.+|.+.-+.+.++.|+|.|.+..+.
T Consensus 121 ~~ie~tg~~~ki~~~~~~l~~~g~i~e~~ 149 (164)
T 2f1f_A 121 YTVQLAGTSGKLDAFLASIRDVAKIVEVA 149 (164)
T ss_dssp EEEEEEECHHHHHHHHHHHTTTSEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCEEEEE
Confidence 57899999999999999999999666664
No 160
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=70.05 E-value=19 Score=23.45 Aligned_cols=69 Identities=10% Similarity=0.079 Sum_probs=43.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+.++++.| +-|++ .++...+..+ + -.++..+.-... +...++.+-+++.+|
T Consensus 82 vD~V~i~tp~~~H~~~~~~al~aG-khVl~---EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g 157 (330)
T 4ew6_A 82 IDAVSLCMPPQYRYEAAYKALVAG-KHVFL---EKPPGATLSEVADLEALANKQGASLFASWHSRYAPAVEAAKAFLAST 157 (330)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTT-CEEEE---CSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSTTHHHHHHHHHSS
T ss_pred CCEEEEeCCcHHHHHHHHHHHHcC-CcEEE---eCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhccHHHHHHHHHHhcC
Confidence 589999998777777788888776 44444 3343333322 1 223444433332 347889999999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 158 ~i 159 (330)
T 4ew6_A 158 TI 159 (330)
T ss_dssp CE
T ss_pred Cc
Confidence 65
No 161
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=69.91 E-value=18 Score=23.97 Aligned_cols=69 Identities=13% Similarity=0.124 Sum_probs=43.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh------h-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN------A-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~------~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-|++ .+++..+..+ . -.++..+..... +...++.+-+++.+|
T Consensus 68 ~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~---EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g 143 (364)
T 3e82_A 68 VDLVVIASPNATHAPLARLALNAG-KHVVV---DKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQG 143 (364)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHT
T ss_pred CCEEEEeCChHHHHHHHHHHHHCC-CcEEE---eCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHcC
Confidence 589999998877778888888776 44444 3344333322 1 223443333222 335688888899988
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 144 ~i 145 (364)
T 3e82_A 144 TL 145 (364)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 162
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=69.60 E-value=5.2 Score=22.88 Aligned_cols=22 Identities=0% Similarity=-0.186 Sum_probs=10.5
Q ss_pred CcEEEEcccChHHHHHHHhhcc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTK 22 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~ 22 (112)
+|++|.|++.+.....+...++
T Consensus 85 ad~Vi~~~~~~~~~~~~~~~~~ 106 (155)
T 2g1u_A 85 ADMVFAFTNDDSTNFFISMNAR 106 (155)
T ss_dssp CSEEEECSSCHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcHHHHHHHHHHH
Confidence 3555555555444344444443
No 163
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=69.60 E-value=4.6 Score=26.83 Aligned_cols=32 Identities=6% Similarity=-0.146 Sum_probs=26.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+||.|+|.......+-.++..|-+++..+.
T Consensus 69 vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 69 ADILVLALPHGVFAREFDRYSALAPVLVDLSA 100 (345)
T ss_dssp CSEEEECCCTTHHHHTHHHHHTTCSEEEECSS
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCc
Confidence 59999999988777777777888888888775
No 164
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=69.58 E-value=2.3 Score=26.72 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=22.9
Q ss_pred CcEEEEccc---ChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLG---TENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g---~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
||+|+-... ....+..+.+.|+++|+++..+...
T Consensus 185 fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 185 FDLLVANLYAELHAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred CCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeecc
Confidence 467774331 1245677788999999999877543
No 165
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=69.52 E-value=4.7 Score=26.71 Aligned_cols=33 Identities=12% Similarity=-0.037 Sum_probs=25.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+||+|+|.....+.+-..+..|.+++..+..
T Consensus 66 vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~ 98 (336)
T 2r00_A 66 VHIALFSAGGELSAKWAPIAAEAGVVVIDNTSH 98 (336)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred CCEEEECCCchHHHHHHHHHHHcCCEEEEcCCc
Confidence 599999998877677777777778887777643
No 166
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=69.41 E-value=15 Score=23.90 Aligned_cols=69 Identities=9% Similarity=0.067 Sum_probs=42.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh------h-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN------A-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~------~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+.++++.| +-|++ .+++..+..+ . -.++..+.-... +...++++-+++.+|
T Consensus 67 vD~V~i~tp~~~H~~~~~~al~~G-khVl~---EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~g 142 (334)
T 3ohs_X 67 VEVAYVGTQHPQHKAAVMLCLAAG-KAVLC---EKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQG 142 (334)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTT-CEEEE---ESSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHHT
T ss_pred CCEEEECCCcHHHHHHHHHHHhcC-CEEEE---ECCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHhcC
Confidence 589999998887788888888776 44444 2333333221 2 223444433332 346788888889888
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 143 ~i 144 (334)
T 3ohs_X 143 TL 144 (334)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 167
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=69.35 E-value=5.7 Score=25.91 Aligned_cols=69 Identities=6% Similarity=0.074 Sum_probs=42.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh------hh-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV------NA-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|-.+ ++ .+++..+.. .. -.++..+.-... +...++.+-+++.+|
T Consensus 68 ~D~V~i~tp~~~h~~~~~~al~~gk~v-l~---EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g 143 (330)
T 3e9m_A 68 IDIIYIPTYNQGHYSAAKLALSQGKPV-LL---EKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEG 143 (330)
T ss_dssp CSEEEECCCGGGHHHHHHHHHHTTCCE-EE---CSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTT
T ss_pred CCEEEEcCCCHHHHHHHHHHHHCCCeE-EE---eCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCC
Confidence 589999998887778788888776443 33 223333322 12 223444333332 336788888999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 144 ~i 145 (330)
T 3e9m_A 144 GL 145 (330)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 168
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=69.30 E-value=6.5 Score=26.00 Aligned_cols=69 Identities=12% Similarity=0.087 Sum_probs=42.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|-. |++ .+++..+..+ + -.++..+.-... +...++.+-+++.+|
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~aGkh-Vl~---EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g 141 (359)
T 3e18_A 66 VDAVLIATPNDSHKELAISALEAGKH-VVC---EKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQK 141 (359)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCE-EEE---ESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHT
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCC-EEe---eCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcC
Confidence 58999999888778888888886644 444 2233333221 1 223444333332 346788888899998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 142 ~i 143 (359)
T 3e18_A 142 TI 143 (359)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 169
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=69.19 E-value=3.5 Score=27.39 Aligned_cols=33 Identities=12% Similarity=0.044 Sum_probs=25.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+||+|+|.....+.+-..++.|-+-+++..+
T Consensus 94 vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~p 126 (337)
T 3e5r_O 94 AEYVVESTGVFTDKEKAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp CSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred CCEEEECCCchhhHHHHHHHHHcCCCEEEEecC
Confidence 599999999887788888888887744455443
No 170
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=69.06 E-value=5.3 Score=24.73 Aligned_cols=30 Identities=13% Similarity=0.222 Sum_probs=21.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|++|++.....+.+..+++.|-.++.-
T Consensus 51 ~DvVv~~~~~~~~~~~~~~~l~~G~~vv~~ 80 (236)
T 2dc1_A 51 MDVAVEAASQQAVKDYAEKILKAGIDLIVL 80 (236)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCcEEEE
Confidence 589999998776667677777765554443
No 171
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=69.00 E-value=5.3 Score=26.78 Aligned_cols=34 Identities=6% Similarity=0.104 Sum_probs=26.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+|++|+|.-.+.+.+-..++.|.+=+.+..+.
T Consensus 95 vDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps 128 (346)
T 3h9e_O 95 SPYVVESTGVYLSIQAASDHISAGAQRVVISAPS 128 (346)
T ss_dssp SCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred ccEEEEeccccCCHHHHHHHHHcCCCEEEECCCC
Confidence 5899999998777788888888888666666554
No 172
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=68.61 E-value=3.7 Score=24.93 Aligned_cols=31 Identities=10% Similarity=0.129 Sum_probs=21.4
Q ss_pred CcEEEEcccC---hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGT---ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~---~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-.... ...+..+.+.|++||.++...
T Consensus 146 ~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 146 FDVAVVDADKENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 4666643222 245788889999999988764
No 173
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=68.59 E-value=5 Score=27.04 Aligned_cols=33 Identities=12% Similarity=-0.027 Sum_probs=26.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+||.|+|.......+-..+..|-+++..+..
T Consensus 65 ~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 65 VDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSY 97 (366)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred CCEEEECCChHhHHHHHHHHHHCCCEEEEcCCc
Confidence 599999998877666677777888888888753
No 174
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=68.59 E-value=2.6 Score=27.48 Aligned_cols=23 Identities=13% Similarity=0.395 Sum_probs=19.5
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+.++..+|++|||++++..+.
T Consensus 226 ~~l~~~~~~l~~ggr~~visfhs 248 (301)
T 1m6y_A 226 EFLKKAEDLLNPGGRIVVISFHS 248 (301)
T ss_dssp HHHHHGGGGEEEEEEEEEEESSH
T ss_pred HHHHHHHHhhCCCCEEEEEecCc
Confidence 35788999999999999998654
No 175
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=68.25 E-value=2.9 Score=27.25 Aligned_cols=19 Identities=26% Similarity=0.483 Sum_probs=15.8
Q ss_pred HHHHhhccCCcEEEEEecC
Q psy12355 15 TLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 15 ~~~~~~l~~~G~iv~~g~~ 33 (112)
..++.+|+|||.++..|+.
T Consensus 243 ~~al~~L~pGGtlv~~aYG 261 (324)
T 3trk_A 243 GDSLRLLKPGGSLLIRAYG 261 (324)
T ss_dssp HHGGGGEEEEEEEEEEECC
T ss_pred HHHHhhcCCCceEEEEeec
Confidence 4578899999999988753
No 176
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=68.02 E-value=18 Score=24.51 Aligned_cols=69 Identities=12% Similarity=0.025 Sum_probs=42.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh------h-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN------A-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~------~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-|++ .+++..+..+ + -.++..+.-... +...++++-+++.+|
T Consensus 111 vD~V~I~tp~~~H~~~~~~al~aG-khVl~---EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G 186 (417)
T 3v5n_A 111 IEAVAIVTPNHVHYAAAKEFLKRG-IHVIC---DKPLTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQAREMIENG 186 (417)
T ss_dssp CSEEEECSCTTSHHHHHHHHHTTT-CEEEE---ESSSCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHHHHTT
T ss_pred CcEEEECCCcHHHHHHHHHHHhCC-CeEEE---ECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHHHhcC
Confidence 589999998877777778887765 54555 2333333221 2 223444333332 336788899999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 187 ~i 188 (417)
T 3v5n_A 187 DI 188 (417)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 177
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=67.97 E-value=6.2 Score=26.45 Aligned_cols=33 Identities=12% Similarity=0.084 Sum_probs=27.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+||.|+|.......+-..+..|-+++..+..
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~ 112 (359)
T 4dpl_A 80 VDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPD 112 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHHTTCEEEECSST
T ss_pred CCEEEECCChHHHHHHHHHHHHCCCEEEEcCCC
Confidence 599999999877777777778888888888754
No 178
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=67.97 E-value=6.2 Score=26.45 Aligned_cols=33 Identities=12% Similarity=0.084 Sum_probs=27.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+||.|+|.......+-..+..|-+++..+..
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~ 112 (359)
T 4dpk_A 80 VDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPD 112 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHHTTCEEEECSST
T ss_pred CCEEEECCChHHHHHHHHHHHHCCCEEEEcCCC
Confidence 599999999877777777778888888888754
No 179
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=67.81 E-value=21 Score=23.89 Aligned_cols=69 Identities=9% Similarity=0.013 Sum_probs=43.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-|++ .+++..+..+ + -.++..+.-... +...++++-+++.+|
T Consensus 86 vD~V~i~tp~~~H~~~~~~al~aG-khVl~---EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~G 161 (398)
T 3dty_A 86 IQAVSIATPNGTHYSITKAALEAG-LHVVC---EKPLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREMIAAG 161 (398)
T ss_dssp CSEEEEESCGGGHHHHHHHHHHTT-CEEEE---CSCSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHHHTT
T ss_pred CCEEEECCCcHHHHHHHHHHHHCC-CeEEE---eCCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcC
Confidence 589999998877778888888865 54444 4444444322 2 223444433332 336788889999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 162 ~i 163 (398)
T 3dty_A 162 EL 163 (398)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 180
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=67.67 E-value=15 Score=23.95 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=42.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh------hh-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV------NA-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|-. +++-- ++..+.. .+ -.++..+.-... +...++.+-+++.+|
T Consensus 65 ~D~V~i~tp~~~h~~~~~~al~~gk~-v~~EK---P~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G 140 (344)
T 3ezy_A 65 VDAVLVCSSTNTHSELVIACAKAKKH-VFCEK---PLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENG 140 (344)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCE-EEEES---CSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTT
T ss_pred CCEEEEcCCCcchHHHHHHHHhcCCe-EEEEC---CCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcC
Confidence 58999999887777778888877644 44422 2222221 11 223444433332 346788889999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 141 ~i 142 (344)
T 3ezy_A 141 TI 142 (344)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 181
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=67.58 E-value=3.7 Score=25.99 Aligned_cols=32 Identities=9% Similarity=-0.058 Sum_probs=23.8
Q ss_pred CcEEEEcccCh-HHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTE-NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~-~~~~~~~~~l~~~G~iv~~g~ 32 (112)
||+|+-..+.+ ..+..+.+.|+++|+++....
T Consensus 180 fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 180 YDAVIADIPDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp EEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred ccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 46777544443 568889999999999998863
No 182
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=67.54 E-value=1.6 Score=28.40 Aligned_cols=31 Identities=13% Similarity=0.185 Sum_probs=22.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+...+.......+.+.|+|||+++..-
T Consensus 145 fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 145 YDVIFVTVGVDEVPETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp EEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred eEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 4777765544444467889999999998763
No 183
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=67.38 E-value=2.7 Score=25.96 Aligned_cols=21 Identities=19% Similarity=0.183 Sum_probs=17.5
Q ss_pred hHHHHHHHhhccCCcEEEEEe
Q psy12355 11 ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g 31 (112)
...+..+.++|+|||+++..-
T Consensus 120 ~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 120 AGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp HHHHHHHTTSEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEec
Confidence 356888999999999998864
No 184
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=66.85 E-value=3.3 Score=24.54 Aligned_cols=19 Identities=11% Similarity=0.139 Sum_probs=15.1
Q ss_pred HHHHHHhhccCCcEEEEEe
Q psy12355 13 CLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g 31 (112)
.+..+.+.|++||+++..-
T Consensus 136 ~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 136 ITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHccCCCEEEEEE
Confidence 4566888999999998743
No 185
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=66.69 E-value=3.7 Score=26.12 Aligned_cols=31 Identities=13% Similarity=-0.030 Sum_probs=22.2
Q ss_pred CcEEEEcccChH-HHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTEN-CLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~-~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-....+. .+..+.+.|+++|.++...
T Consensus 140 fD~Ii~d~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 140 YDLIFCLQEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp EEEEEESSCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCEEEECCCChHHHHHHHHHhcCCCcEEEEEc
Confidence 477774333333 4788999999999999864
No 186
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=66.40 E-value=13 Score=24.38 Aligned_cols=69 Identities=16% Similarity=0.180 Sum_probs=42.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-|++ .+++..+..+ + -.++..+.-... +...++.+-+++.+|
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~---EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g 141 (345)
T 3f4l_A 66 VKLVVVCTHADSHFEYAKRALEAG-KNVLV---EKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESG 141 (345)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHHS
T ss_pred CCEEEEcCChHHHHHHHHHHHHcC-CcEEE---eCCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCHHHHHHHHHHhcC
Confidence 489999998877778888888776 44444 3334333322 1 223444433332 336788888888888
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 142 ~i 143 (345)
T 3f4l_A 142 KL 143 (345)
T ss_dssp TT
T ss_pred CC
Confidence 66
No 187
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=66.37 E-value=6.5 Score=25.71 Aligned_cols=69 Identities=10% Similarity=0.053 Sum_probs=42.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh------hh-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV------NA-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|-. +++- +++..+.. .. -.++..+.-... +...++.+-+++.+|
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~~gk~-v~~E---KP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g 141 (344)
T 3euw_A 66 IDGIVIGSPTSTHVDLITRAVERGIP-ALCE---KPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQ 141 (344)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCC-EEEC---SCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTT
T ss_pred CCEEEEeCCchhhHHHHHHHHHcCCc-EEEE---CCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcC
Confidence 58999999888777878888877644 4442 22222221 11 223333333332 346788888999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 142 ~i 143 (344)
T 3euw_A 142 EI 143 (344)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 188
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=66.09 E-value=11 Score=24.51 Aligned_cols=69 Identities=9% Similarity=0.090 Sum_probs=42.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh------hh-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV------NA-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|-. +++- +++..+.. .. -.++..+..... +...++.+-+++.+|
T Consensus 68 ~D~V~i~tp~~~h~~~~~~al~aGk~-Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~~g 143 (329)
T 3evn_A 68 IDVIYVATINQDHYKVAKAALLAGKH-VLVE---KPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASG 143 (329)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCE-EEEE---SSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHHTT
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCe-EEEc---cCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHhCC
Confidence 58999999887777778888877644 4442 23333322 11 223444433332 336688888899988
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 144 ~i 145 (329)
T 3evn_A 144 EI 145 (329)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 189
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=66.07 E-value=9.2 Score=22.86 Aligned_cols=19 Identities=16% Similarity=0.345 Sum_probs=16.7
Q ss_pred HHHHHHhhccCCcEEEEEe
Q psy12355 13 CLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g 31 (112)
.+..+.++|++||++++.-
T Consensus 127 ~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 127 AIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp HHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEe
Confidence 6788899999999999874
No 190
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=65.98 E-value=4.5 Score=27.85 Aligned_cols=31 Identities=10% Similarity=0.141 Sum_probs=22.7
Q ss_pred CcEEEEcccC-----hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGT-----ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~-----~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+..... ...+..+.+.|+|||.+++--
T Consensus 289 FDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 289 FDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 5888864322 235788899999999999864
No 191
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=65.96 E-value=4.2 Score=24.24 Aligned_cols=24 Identities=17% Similarity=0.123 Sum_probs=19.0
Q ss_pred hHHHHHHHhhccCCcEEEEEecCC
Q psy12355 11 ENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
...+..+.+.|++||+++......
T Consensus 126 ~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 126 EAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCeEEEEEeCCC
Confidence 345788889999999999886543
No 192
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=65.75 E-value=4.6 Score=24.64 Aligned_cols=23 Identities=13% Similarity=0.010 Sum_probs=18.4
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.++|++||+++......
T Consensus 152 ~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 152 AWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp HHHHHHHHHEEEEEEEEEEECCC
T ss_pred HHHHHHHHHCCCCcEEEEEEecc
Confidence 35778889999999999876543
No 193
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=65.69 E-value=23 Score=24.09 Aligned_cols=69 Identities=12% Similarity=0.151 Sum_probs=42.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|=. |++ .+++..+..+ + -.++..+.-... +...++.+.+++.+|
T Consensus 151 vD~V~iatp~~~h~~~~~~al~aGk~-Vl~---EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G 226 (433)
T 1h6d_A 151 IDAVYIILPNSLHAEFAIRAFKAGKH-VMC---EKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIREN 226 (433)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCE-EEE---CSSCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHTT
T ss_pred CCEEEEcCCchhHHHHHHHHHHCCCc-EEE---cCCCCCCHHHHHHHHHHHHHhCCeEEEEechhcCHHHHHHHHHHHcC
Confidence 58999999887777778888876644 444 2333333221 2 123444433332 336788899999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 227 ~i 228 (433)
T 1h6d_A 227 QL 228 (433)
T ss_dssp SS
T ss_pred CC
Confidence 76
No 194
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=65.69 E-value=3.4 Score=24.99 Aligned_cols=31 Identities=13% Similarity=0.120 Sum_probs=21.0
Q ss_pred CcEEEEccc---ChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLG---TENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g---~~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-... ....+..+.+.|++||.++.-.
T Consensus 141 fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 141 YDLIYIDADKANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 466663222 1245788889999999998754
No 195
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=65.61 E-value=4.4 Score=26.39 Aligned_cols=21 Identities=33% Similarity=0.437 Sum_probs=17.2
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.++|++||+++....
T Consensus 227 ~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 227 RLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp HHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEEEeC
Confidence 567889999999999987643
No 196
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=65.22 E-value=4.3 Score=27.08 Aligned_cols=34 Identities=15% Similarity=0.030 Sum_probs=25.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+|++|+|...+.+.+-..++.|.+-+.+..+.
T Consensus 92 vDiV~estG~f~s~e~a~~h~~aGakkVviSaps 125 (335)
T 1obf_O 92 VDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG 125 (335)
T ss_dssp CSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred CCEEEEccCccccHHHHHHHHHcCCCEEEECCcc
Confidence 5899999997666777778888777666666544
No 197
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=65.04 E-value=5 Score=26.60 Aligned_cols=31 Identities=13% Similarity=-0.067 Sum_probs=22.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g 31 (112)
+|+||+|+|.......+-.+++.|-+++..+
T Consensus 79 vDvV~~atp~~~~~~~a~~~l~aG~~VId~s 109 (337)
T 1cf2_P 79 ADIVIDCTPEGIGAKNLKMYKEKGIKAIFQG 109 (337)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCCEEECT
T ss_pred CCEEEECCCchhhHHHHHHHHHcCCEEEEec
Confidence 5999999998776777777777765544444
No 198
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=65.01 E-value=4.2 Score=27.95 Aligned_cols=21 Identities=24% Similarity=0.390 Sum_probs=16.9
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.++|++||+++....
T Consensus 370 ~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 370 ELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp HHHHHHHTTEEEEEEEEEEES
T ss_pred HHHHHHHHhcCCCcEEEEEeC
Confidence 357888999999999987653
No 199
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=64.71 E-value=4.4 Score=24.87 Aligned_cols=31 Identities=16% Similarity=0.300 Sum_probs=21.2
Q ss_pred CcEEEEcccC---hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGT---ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~---~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-.... ...+..+.+.|++||.++.-.
T Consensus 130 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 130 YQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp EEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 4667643222 235788889999999988743
No 200
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=64.53 E-value=6 Score=24.71 Aligned_cols=31 Identities=16% Similarity=0.096 Sum_probs=21.6
Q ss_pred CcEEEEcccC---hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGT---ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~---~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-.... ...+..+.+.|++||.++.-.
T Consensus 157 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 157 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 5777732222 346788899999999998653
No 201
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=64.37 E-value=10 Score=24.14 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=18.4
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+.++|+|||++++....
T Consensus 164 ~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 164 TFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp HHHHHHHHSSCTTCEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEEEe
Confidence 5678889999999999987653
No 202
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=64.25 E-value=3.5 Score=27.64 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=27.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+|++|+|.-.+.+.+-..++.|.+-+.+..+.
T Consensus 92 vDiVlesTG~f~s~e~a~~hl~aGAkkViISaps 125 (345)
T 4dib_A 92 VEVVIEATGKFNSKEKAILHVEAGAKKVILTAPG 125 (345)
T ss_dssp EEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred ccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCC
Confidence 4899999998777888888888888777777654
No 203
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=64.19 E-value=4 Score=26.25 Aligned_cols=22 Identities=14% Similarity=0.262 Sum_probs=18.7
Q ss_pred hHHHHHHHhhccCCcEEEEEec
Q psy12355 11 ENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
...+..+.++|+|||+++....
T Consensus 201 ~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 201 HDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEc
Confidence 4678889999999999998763
No 204
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=64.19 E-value=4.8 Score=27.42 Aligned_cols=20 Identities=25% Similarity=0.212 Sum_probs=16.5
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|++||+++...
T Consensus 355 ~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 355 EILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp HHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEE
Confidence 44778899999999998765
No 205
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=64.17 E-value=2.8 Score=25.90 Aligned_cols=20 Identities=15% Similarity=0.144 Sum_probs=17.0
Q ss_pred HHHHHHhhccCCcEEEEEec
Q psy12355 13 CLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~ 32 (112)
.+..+.++|+|||++++...
T Consensus 141 ~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 141 LFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEe
Confidence 57888899999999998864
No 206
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=64.08 E-value=10 Score=24.67 Aligned_cols=18 Identities=17% Similarity=0.045 Sum_probs=14.1
Q ss_pred HHHHHHhhccCCcEEEEE
Q psy12355 13 CLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~ 30 (112)
.+..+.+.|+|||++++-
T Consensus 173 ~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 173 VLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp HHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHhCCCCEEEEE
Confidence 455567999999998873
No 207
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=63.92 E-value=7.2 Score=20.64 Aligned_cols=28 Identities=4% Similarity=-0.070 Sum_probs=12.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLM 28 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv 28 (112)
+|++|+|+|........-.+.+.+-+.+
T Consensus 70 ~d~vi~~~~~~~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 70 FDAVISAAPFFLTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred CCEEEECCCchhhHHHHHHHHHhCCCEE
Confidence 3566666654433333333334444433
No 208
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=63.77 E-value=21 Score=23.80 Aligned_cols=70 Identities=9% Similarity=-0.017 Sum_probs=42.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh------h-hhcCeeEEeEe--ccCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN------A-CAKEIDILSCF--RYVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~------~-~~~~~~l~g~~--~~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-|++ .+++..+..+ + -.++..+.-.. .+...++.+-+++.+|
T Consensus 65 vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~---EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g 140 (387)
T 3moi_A 65 MDAVYIASPHQFHCEHVVQASEQG-LHIIV---EKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQEG 140 (387)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHHC
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCC-Cceee---eCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHhcC
Confidence 589999998877777788888876 44444 3333333221 1 22344433322 2336788888899998
Q ss_pred CCC
Q psy12355 72 KCP 74 (112)
Q Consensus 72 ~~~ 74 (112)
.+-
T Consensus 141 ~iG 143 (387)
T 3moi_A 141 SVG 143 (387)
T ss_dssp TTC
T ss_pred CCC
Confidence 763
No 209
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=63.76 E-value=9.1 Score=25.15 Aligned_cols=69 Identities=6% Similarity=-0.040 Sum_probs=42.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh------h-hhhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV------N-ACAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~-~~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|-. +++- +++..+.. . .-.++..+.-... +...++++-+++.+|
T Consensus 76 ~D~V~i~tp~~~h~~~~~~al~~gk~-v~~E---KP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g 151 (354)
T 3q2i_A 76 ADIVILTTPSGLHPTQSIECSEAGFH-VMTE---KPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEK 151 (354)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCE-EEEC---SSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTT
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCC-EEEe---CCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcC
Confidence 58999999887777778888877644 4442 23333322 1 1223444432222 336788889999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 152 ~i 153 (354)
T 3q2i_A 152 RF 153 (354)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 210
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=63.70 E-value=3.5 Score=26.07 Aligned_cols=20 Identities=20% Similarity=0.190 Sum_probs=16.7
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|+|||+++..-
T Consensus 156 ~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 156 LALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEe
Confidence 46788999999999998663
No 211
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=63.68 E-value=4 Score=24.50 Aligned_cols=31 Identities=10% Similarity=0.014 Sum_probs=20.8
Q ss_pred CcEEEEcc---cChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPL---GTENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~---g~~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-.. .....+..+.+.|++||.++.-.
T Consensus 127 fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 127 IDILFMDCDVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 46666321 12346788889999999988743
No 212
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=63.67 E-value=2.2 Score=25.81 Aligned_cols=23 Identities=30% Similarity=0.343 Sum_probs=18.6
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.+.|++||+++......
T Consensus 122 ~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 122 RIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEBC
T ss_pred HHHHHHHHHcCCCeEEEEEECCc
Confidence 46788899999999999886433
No 213
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=63.61 E-value=7.3 Score=26.15 Aligned_cols=32 Identities=13% Similarity=0.060 Sum_probs=23.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+||+|+|...+.+.+-..+..|.+=+++..
T Consensus 106 vDvV~eatg~~~s~e~a~~~l~~GakkvVId~ 137 (354)
T 3cps_A 106 AQIVCESTGVFTTEEKASLHLKGGAKKVIISA 137 (354)
T ss_dssp CCEEEECSSSCCSHHHHGGGGTTTCSEEEESS
T ss_pred CCEEEECCCchhhHHHHHHHHHcCCcEEEEeC
Confidence 59999999987777888888887763334433
No 214
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=63.44 E-value=7.3 Score=25.90 Aligned_cols=33 Identities=9% Similarity=-0.002 Sum_probs=26.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+||.|+|.....+.+-+.+..|-+++..+..
T Consensus 76 ~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 76 VDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGA 108 (337)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred CCEEEECCChHHHHHHHHHHHHCCCEEEEcCCc
Confidence 599999998877667677778888898888754
No 215
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=63.44 E-value=19 Score=24.57 Aligned_cols=70 Identities=10% Similarity=0.161 Sum_probs=42.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCc-----EEEEEecCCCccccChh------hhh-hcCeeEEeEec--cCCCHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGG-----KLMLVGMGPQMVSVPLV------NAC-AKEIDILSCFR--YVNDYPDALE 66 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G-----~iv~~g~~~~~~~~~~~------~~~-~~~~~l~g~~~--~~~~~~~~~~ 66 (112)
+|+|+.|++.......+..+++.|. +-|++- +++..+.. ... .++..+.-.+. +...++.+.+
T Consensus 90 vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~ 166 (438)
T 3btv_A 90 IDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVE---WALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKE 166 (438)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEE---SSCCSSHHHHHHHHHHHHTTTCEEEEECGGGGCHHHHHHHH
T ss_pred CCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEec---CcccCCHHHHHHHHHHHHHcCCeEEEecccccCHHHHHHHH
Confidence 5899999987777777888887762 444443 22322321 122 33444433332 3366888889
Q ss_pred HHHcCCC
Q psy12355 67 MVASGKC 73 (112)
Q Consensus 67 ~~~~g~~ 73 (112)
++.+|.+
T Consensus 167 ~i~~G~i 173 (438)
T 3btv_A 167 LISQGYI 173 (438)
T ss_dssp HHHTTTT
T ss_pred HHHcCCC
Confidence 9999876
No 216
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=62.93 E-value=4.7 Score=27.99 Aligned_cols=20 Identities=25% Similarity=0.355 Sum_probs=16.3
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|++||+++...
T Consensus 215 ~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 215 EILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEE
Confidence 35778899999999998654
No 217
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=62.76 E-value=7.6 Score=25.91 Aligned_cols=32 Identities=9% Similarity=-0.001 Sum_probs=25.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+||.|+|.......+-..+..|-+++..+.
T Consensus 64 ~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa 95 (344)
T 3tz6_A 64 LDIALFSAGSAMSKVQAPRFAAAGVTVIDNSS 95 (344)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred CCEEEECCChHHHHHHHHHHHhCCCEEEECCC
Confidence 59999999887766666677778888887764
No 218
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=62.49 E-value=5.7 Score=25.11 Aligned_cols=23 Identities=17% Similarity=0.093 Sum_probs=19.2
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.++|+|||+++.++...
T Consensus 116 ~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 116 RFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHcCCCCEEEEEECCC
Confidence 46888999999999999887543
No 219
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=62.44 E-value=2.4 Score=26.23 Aligned_cols=21 Identities=19% Similarity=0.142 Sum_probs=17.9
Q ss_pred hHHHHHHHhhccCCcEEEEEe
Q psy12355 11 ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g 31 (112)
...+..+.++|+|||++++..
T Consensus 130 ~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 130 ERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp HHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEE
Confidence 456888999999999999875
No 220
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=62.25 E-value=13 Score=22.27 Aligned_cols=20 Identities=10% Similarity=0.061 Sum_probs=16.3
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||++++..
T Consensus 137 ~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 137 TFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp HHHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEe
Confidence 46788889999999988754
No 221
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=62.19 E-value=8.7 Score=23.76 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=19.3
Q ss_pred CcEEE-Eccc--ChHHHHHHHh-hccCCcEEEEEe
Q psy12355 1 MMLYL-DPLG--TENCLTLGIN-VTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~-d~~g--~~~~~~~~~~-~l~~~G~iv~~g 31 (112)
+|+|+ |+.- ....+..+.+ .|++||+++..-
T Consensus 153 fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 153 HPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 46665 3321 1234555665 999999998863
No 222
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=62.16 E-value=29 Score=22.47 Aligned_cols=69 Identities=16% Similarity=0.060 Sum_probs=42.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEecc--CCC-HHHHHHHHHc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFRY--VND-YPDALEMVAS 70 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~~--~~~-~~~~~~~~~~ 70 (112)
+|+|+.|++.......+..+++.| +-|++ .+++..+..+ + -.++..+.-.+.. ... ++.+-+++.+
T Consensus 67 ~D~V~i~tp~~~h~~~~~~al~aG-khVl~---EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i~~ 142 (336)
T 2p2s_A 67 IDLIACAVIPCDRAELALRTLDAG-KDFFT---AKPPLTTLEQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELVQR 142 (336)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSSCCSCHHHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHHHT
T ss_pred CCEEEEeCChhhHHHHHHHHHHCC-CcEEE---eCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHHhC
Confidence 589999998877778888888775 43444 3334333322 1 2234444333322 245 8889999999
Q ss_pred CCC
Q psy12355 71 GKC 73 (112)
Q Consensus 71 g~~ 73 (112)
|.+
T Consensus 143 g~i 145 (336)
T 2p2s_A 143 GEI 145 (336)
T ss_dssp TTT
T ss_pred CCC
Confidence 876
No 223
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=62.15 E-value=2.4 Score=26.42 Aligned_cols=20 Identities=10% Similarity=0.130 Sum_probs=17.5
Q ss_pred hHHHHHHHhhccCCcEEEEE
Q psy12355 11 ENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~ 30 (112)
...+..+.+.|+|||+++.+
T Consensus 117 ~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 117 DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp GGTHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEE
Confidence 45688899999999999986
No 224
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=62.06 E-value=8.6 Score=25.71 Aligned_cols=31 Identities=6% Similarity=-0.099 Sum_probs=24.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+||.|+|...+...+-.+ +.|.+++..+.
T Consensus 83 vDvVf~atp~~~s~~~a~~~-~aG~~VId~sa 113 (359)
T 1xyg_A 83 VDAVFCCLPHGTTQEIIKEL-PTALKIVDLSA 113 (359)
T ss_dssp CSEEEECCCTTTHHHHHHTS-CTTCEEEECSS
T ss_pred CCEEEEcCCchhHHHHHHHH-hCCCEEEECCc
Confidence 59999999887777777777 77777777764
No 225
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=61.92 E-value=8.8 Score=25.29 Aligned_cols=32 Identities=16% Similarity=-0.006 Sum_probs=23.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+|++|+|.......+..+++.|-+ |++..+
T Consensus 80 vDvV~~aTp~~~h~~~a~~~l~aGk~-Vi~sap 111 (334)
T 2czc_A 80 VDIIVDATPGGIGAKNKPLYEKAGVK-AIFQGG 111 (334)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCE-EEECTT
T ss_pred CCEEEECCCccccHHHHHHHHHcCCc-eEeecc
Confidence 59999999887667777777776644 555543
No 226
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=61.85 E-value=25 Score=22.89 Aligned_cols=69 Identities=9% Similarity=-0.001 Sum_probs=42.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeE--EeEe-ccCCCHHHHHHHHHc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDI--LSCF-RYVNDYPDALEMVAS 70 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l--~g~~-~~~~~~~~~~~~~~~ 70 (112)
+|+|+.|++.......+..+++.|-. +++ .+++..+..+ + -.++..+ .+.. .+...++.+-+++.+
T Consensus 67 ~D~V~i~tp~~~h~~~~~~al~~Gk~-vl~---EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~~ 142 (344)
T 3mz0_A 67 VDAVLVTSWGPAHESSVLKAIKAQKY-VFC---EKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDN 142 (344)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCE-EEE---CSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHHT
T ss_pred CCEEEECCCchhHHHHHHHHHHCCCc-EEE---cCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHHc
Confidence 58999999887777778888777644 444 3333333322 2 2234433 2322 234678888899999
Q ss_pred CCC
Q psy12355 71 GKC 73 (112)
Q Consensus 71 g~~ 73 (112)
|.+
T Consensus 143 g~i 145 (344)
T 3mz0_A 143 HVI 145 (344)
T ss_dssp TTT
T ss_pred CCC
Confidence 876
No 227
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=61.79 E-value=5.4 Score=25.28 Aligned_cols=20 Identities=15% Similarity=0.157 Sum_probs=17.3
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|+|||++++..
T Consensus 168 ~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 168 KVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEE
Confidence 46888999999999999875
No 228
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=61.69 E-value=5.6 Score=24.42 Aligned_cols=21 Identities=24% Similarity=0.335 Sum_probs=17.7
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.++|++||+++....
T Consensus 105 ~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 105 KAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEEc
Confidence 467888999999999998754
No 229
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=61.45 E-value=6.6 Score=26.32 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=24.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+||+|+|...+.+.+-..++.|.+-+++..+.
T Consensus 100 vDiV~estG~f~s~e~a~~hl~aGakkVVIsaps 133 (345)
T 2b4r_O 100 VDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP 133 (345)
T ss_dssp CSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred CCEEEECcCccccHhhHHHHHHCCCCEEEECCCC
Confidence 5899999987666777777787777655555443
No 230
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=61.23 E-value=31 Score=22.49 Aligned_cols=69 Identities=17% Similarity=0.089 Sum_probs=42.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h---h-hcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A---C-AKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~---~-~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.....+.+..+++.| +-|++ .+++..+..+ + . .++..+.-... +...++.+-+++.+|
T Consensus 83 vD~V~i~tp~~~H~~~~~~al~aG-khVl~---EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g 158 (340)
T 1zh8_A 83 VDAVDLTLPVELNLPFIEKALRKG-VHVIC---EKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESG 158 (340)
T ss_dssp CSEEEECCCGGGHHHHHHHHHHTT-CEEEE---ESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHHTT
T ss_pred CCEEEEeCCchHHHHHHHHHHHCC-CcEEE---eCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcC
Confidence 589999998877777788888765 44444 2333333322 2 1 23444333332 346788888999888
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 159 ~i 160 (340)
T 1zh8_A 159 AI 160 (340)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 231
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=60.87 E-value=17 Score=22.44 Aligned_cols=22 Identities=5% Similarity=-0.090 Sum_probs=17.8
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+.+.|++||++++++..
T Consensus 195 ~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHHHHHHHSCTTCEEEEEESS
T ss_pred HHHHHHHHhcCCCcEEEEeCcc
Confidence 4577788999999999986543
No 232
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=60.43 E-value=6.2 Score=22.59 Aligned_cols=23 Identities=9% Similarity=0.244 Sum_probs=18.8
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.+.|+++|+++......
T Consensus 93 ~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 93 HVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHHhcCCCCEEEEEEcCc
Confidence 45788899999999999886543
No 233
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=60.02 E-value=27 Score=22.66 Aligned_cols=69 Identities=6% Similarity=-0.141 Sum_probs=42.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-|++ .+++..+..+ + -.++..+.-... +...+..+.+++.+|
T Consensus 74 vD~V~I~tP~~~H~~~~~~al~aG-khVl~---EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g 149 (318)
T 3oa2_A 74 LDYVSICSPNYLHYPHIAAGLRLG-CDVIC---EKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVARE 149 (318)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSSCCSCHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHHS
T ss_pred CcEEEECCCcHHHHHHHHHHHHCC-CeEEE---ECCCcCCHHHHHHHHHHHHHhCCEEEEEEhhhcCHHHHHHHHHHhcC
Confidence 589999998877778888888775 44555 4444444322 2 123444433332 336788888899888
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 150 ~i 151 (318)
T 3oa2_A 150 KS 151 (318)
T ss_dssp -C
T ss_pred CC
Confidence 65
No 234
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=59.40 E-value=3.8 Score=26.19 Aligned_cols=19 Identities=21% Similarity=0.175 Sum_probs=15.9
Q ss_pred HHHHHHHhhccCCcEEEEE
Q psy12355 12 NCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~ 30 (112)
..+..+.++|++||++++.
T Consensus 201 ~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 201 RMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEe
Confidence 3577888999999999875
No 235
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=59.39 E-value=8.6 Score=25.55 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=25.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+||.|+|.....+.+-.+++.|-+++..+.
T Consensus 78 vDvVf~atp~~~s~~~a~~~~~aG~~VId~s~ 109 (350)
T 2ep5_A 78 VDVVLSALPNELAESIELELVKNGKIVVSNAS 109 (350)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred CCEEEECCChHHHHHHHHHHHHCCCEEEECCc
Confidence 59999999887777777778888878777653
No 236
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=59.30 E-value=7.9 Score=25.65 Aligned_cols=32 Identities=9% Similarity=-0.037 Sum_probs=23.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+||.|+|.....+.+-..+..|.+++.++.
T Consensus 69 ~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa 100 (340)
T 2hjs_A 69 VGLAFFAAAAEVSRAHAERARAAGCSVIDLSG 100 (340)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEETTC
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCC
Confidence 59999999876666666666777777776654
No 237
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=59.30 E-value=8.8 Score=22.73 Aligned_cols=24 Identities=21% Similarity=0.133 Sum_probs=18.8
Q ss_pred hHHHHHHHhhccCCcEEEEEecCC
Q psy12355 11 ENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
...+..+.+.|++||+++......
T Consensus 128 ~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 128 ATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHHHHhCCCCCEEEEEeccC
Confidence 346788999999999999875433
No 238
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=59.25 E-value=4.1 Score=24.97 Aligned_cols=18 Identities=22% Similarity=0.277 Sum_probs=15.4
Q ss_pred HHHHHhhccCCcEEEEEe
Q psy12355 14 LTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 14 ~~~~~~~l~~~G~iv~~g 31 (112)
+..+.+.|+|||+++.+-
T Consensus 153 l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 153 KNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHTHHHHEEEEEEEEECC
T ss_pred HHHHHHhcCCCeEEEEEe
Confidence 677889999999998764
No 239
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=58.91 E-value=12 Score=24.60 Aligned_cols=30 Identities=10% Similarity=0.104 Sum_probs=22.3
Q ss_pred CcEEEEcccCh----HHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTE----NCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~----~~~~~~~~~l~~~G~iv~~ 30 (112)
.|+|+||+|+. ...+.+.++|+.|=+++..
T Consensus 87 iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvta 120 (331)
T 3c8m_A 87 FDIVVDATPASADGKKELAFYKETFENGKDVVTA 120 (331)
T ss_dssp CSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEECCCCCCccchHHHHHHHHHHCCCeEEec
Confidence 58999999884 4556778888877666653
No 240
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=58.91 E-value=7.4 Score=23.65 Aligned_cols=23 Identities=26% Similarity=0.262 Sum_probs=18.6
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.+.|++||++++.....
T Consensus 134 ~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 134 RALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHHhCCCeEEEEEEcCC
Confidence 46888999999999999876433
No 241
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=58.71 E-value=8.6 Score=25.84 Aligned_cols=31 Identities=6% Similarity=0.030 Sum_probs=19.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g 31 (112)
+|+||+|+|.....+.+-..+..|-+.+++.
T Consensus 66 ~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID 96 (367)
T 1t4b_A 66 LDIIVTCQGGDYTNEIYPKLRESGWQGYWID 96 (367)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEECCCchhHHHHHHHHHHCCCCEEEEc
Confidence 6999999987666565555555554333333
No 242
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=58.59 E-value=7.2 Score=23.29 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=19.2
Q ss_pred hHHHHHHHhhccCCcEEEEEecCC
Q psy12355 11 ENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
...+..+.+.|++||++++.....
T Consensus 132 ~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 132 IELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHHHHHhCCCeEEEEEecCc
Confidence 356888999999999999876433
No 243
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=58.48 E-value=4.3 Score=25.35 Aligned_cols=21 Identities=29% Similarity=0.189 Sum_probs=17.8
Q ss_pred hHHHHHHHhhccCCcEEEEEe
Q psy12355 11 ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g 31 (112)
...+..+.+.|+|||++++..
T Consensus 130 ~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 130 ERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp HHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEE
Confidence 456888999999999999875
No 244
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=58.46 E-value=12 Score=23.94 Aligned_cols=32 Identities=6% Similarity=0.111 Sum_probs=25.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
.|+|++|.+....-+...++|+.|-.++..+.
T Consensus 61 pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S~ 92 (253)
T 1j5p_A 61 VSTVVECASPEAVKEYSLQILKNPVNYIIIST 92 (253)
T ss_dssp CCEEEECSCHHHHHHHHHHHTTSSSEEEECCG
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCEEEcCh
Confidence 49999999665544458999999999888764
No 245
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=58.15 E-value=7.8 Score=23.85 Aligned_cols=20 Identities=35% Similarity=0.390 Sum_probs=16.8
Q ss_pred hHHHHHHHhhccCCcEEEEE
Q psy12355 11 ENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~ 30 (112)
...+..+.+.|++||+++..
T Consensus 121 ~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 121 PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCcEEEEE
Confidence 35678889999999999876
No 246
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=57.79 E-value=8.9 Score=22.17 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=17.9
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.+.|+++|+++......
T Consensus 138 ~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 138 RIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEST
T ss_pred HHHHHHHHHcCCCCEEEEEECCC
Confidence 45677788999999999886544
No 247
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=57.65 E-value=16 Score=23.23 Aligned_cols=31 Identities=13% Similarity=0.011 Sum_probs=21.8
Q ss_pred CcEEEEcccChHHHHHHH-------hhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGI-------NVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~-------~~l~~~G~iv~~g 31 (112)
+|+|+.|++.+..+...+ ..++++..++..+
T Consensus 62 ~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s 99 (299)
T 1vpd_A 62 CDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMS 99 (299)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECC
Confidence 589999998666555554 4567777776664
No 248
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=57.63 E-value=3.8 Score=24.41 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=20.3
Q ss_pred CcEEEEcccCh---HHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTE---NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~---~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+|+-..... ..+..+.+.|+++|+++..+..
T Consensus 126 fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 126 FDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp EEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 46666433222 2345566788999999986543
No 249
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=57.25 E-value=22 Score=22.91 Aligned_cols=69 Identities=14% Similarity=0.156 Sum_probs=40.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh------hhh-hcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV------NAC-AKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~~~-~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-+++- +++..+.. .+. .++..+.-... +...++.+.+++.+|
T Consensus 64 ~D~V~i~tp~~~h~~~~~~al~~G-k~V~~E---KP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g 139 (323)
T 1xea_A 64 VDAVMIHAATDVHSTLAAFFLHLG-IPTFVD---KPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELAQQ 139 (323)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTT-CCEEEE---SCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHHHHT
T ss_pred CCEEEEECCchhHHHHHHHHHHCC-CeEEEe---CCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHHhcC
Confidence 589999998776667777777764 433332 22222222 122 23444443332 335677888888888
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 140 ~i 141 (323)
T 1xea_A 140 EC 141 (323)
T ss_dssp SC
T ss_pred Cc
Confidence 66
No 250
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=57.24 E-value=5.6 Score=26.41 Aligned_cols=34 Identities=9% Similarity=0.053 Sum_probs=24.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+||+|+|...+.+.+-..++.|.+=++++.+.
T Consensus 87 vDiV~estG~~~s~e~a~~~l~aGakkvVIsaps 120 (331)
T 2g82_O 87 VGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (331)
T ss_dssp EEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred CCEEEECCCchhhHHHHHHHHHCCCCEEEECCCC
Confidence 4899999998777777777887776445555543
No 251
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=57.19 E-value=11 Score=25.50 Aligned_cols=23 Identities=13% Similarity=0.096 Sum_probs=18.1
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+++.|++||.++......
T Consensus 307 ~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 307 DLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp HHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHHHhcCCCCEEEEEECCC
Confidence 45777899999999998776543
No 252
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=57.01 E-value=5.7 Score=23.72 Aligned_cols=21 Identities=24% Similarity=0.148 Sum_probs=17.0
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|++||+++..-.
T Consensus 122 ~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 122 DVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEEc
Confidence 457788899999999988743
No 253
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=56.96 E-value=6.1 Score=24.30 Aligned_cols=20 Identities=20% Similarity=0.210 Sum_probs=16.7
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||+++..-
T Consensus 113 ~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 113 AVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp HHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEe
Confidence 45778889999999998764
No 254
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=56.85 E-value=9 Score=23.98 Aligned_cols=31 Identities=10% Similarity=0.062 Sum_probs=21.0
Q ss_pred CcEEEE-cccC-hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLD-PLGT-ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d-~~g~-~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+- ++.. ...+..+.+.|++||+++.+-
T Consensus 152 fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 152 YARAVARAVAPLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 466663 2222 345677888999999998764
No 255
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=56.82 E-value=7.8 Score=24.64 Aligned_cols=22 Identities=14% Similarity=0.191 Sum_probs=18.0
Q ss_pred hHHHHHHHhhccCCcEEEEEec
Q psy12355 11 ENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
...+..+.++|++||++++...
T Consensus 129 ~~~l~~~~~~LkpgG~l~i~~~ 150 (299)
T 3g5t_A 129 EKFQRSAYANLRKDGTIAIWGY 150 (299)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEec
Confidence 4568889999999999988553
No 256
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=56.51 E-value=31 Score=23.12 Aligned_cols=69 Identities=12% Similarity=0.064 Sum_probs=43.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+|+.| +=|++ .+++..+..+ + -.++..+.-.+. +...++++-+++.+|
T Consensus 97 vD~V~I~tp~~~H~~~~~~al~aG-khVl~---EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G 172 (412)
T 4gqa_A 97 VDVVDITSPNHLHYTMAMAAIAAG-KHVYC---EKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIARG 172 (412)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTT-CEEEE---ESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHHHHT
T ss_pred CCEEEECCCcHHHHHHHHHHHHcC-CCeEe---ecCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHHhcC
Confidence 589999998887788888888765 44444 3344333322 2 123444333333 336788888999998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 173 ~i 174 (412)
T 4gqa_A 173 DI 174 (412)
T ss_dssp TT
T ss_pred Cc
Confidence 76
No 257
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=56.42 E-value=7.8 Score=24.72 Aligned_cols=21 Identities=10% Similarity=0.023 Sum_probs=17.2
Q ss_pred hHHHHHHHhhccCCcEEEEEe
Q psy12355 11 ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g 31 (112)
...+..+.+.|+++|.++...
T Consensus 173 ~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 173 EEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEc
Confidence 345788899999999998763
No 258
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=56.41 E-value=6.5 Score=23.23 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=17.8
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+.+.|++||++++.-..
T Consensus 122 ~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 122 DALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCcEEEEEEcc
Confidence 4678888999999999877543
No 259
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=55.57 E-value=9 Score=23.36 Aligned_cols=30 Identities=7% Similarity=0.169 Sum_probs=20.2
Q ss_pred CcEEEEcccCh-H---HHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTE-N---CLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~-~---~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|+-....+ . .+..+.+.|+++|+++..
T Consensus 148 ~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 148 VDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 46777543333 1 255688899999999873
No 260
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=55.55 E-value=8.1 Score=24.55 Aligned_cols=32 Identities=13% Similarity=0.062 Sum_probs=22.0
Q ss_pred CcEEEEccc--ChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLG--TENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g--~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
||+|+-..+ ....+..+.++|++||.++....
T Consensus 193 fD~Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 193 ADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp EEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEECCchhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 465553222 22568889999999999998764
No 261
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=55.52 E-value=17 Score=24.16 Aligned_cols=33 Identities=6% Similarity=-0.206 Sum_probs=22.1
Q ss_pred CcEEEEcccChHHHHHHH-hhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGI-NVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~-~~l~~~G~iv~~g~~~ 34 (112)
+|+|++|+|.......+- ..++.| +.|....+.
T Consensus 82 vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~ 115 (343)
T 2yyy_A 82 ADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGE 115 (343)
T ss_dssp CSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTS
T ss_pred CCEEEECCCccccHHHHHHHHHHCC-CEEEECCCc
Confidence 599999998766556563 666665 556565443
No 262
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=55.40 E-value=38 Score=23.50 Aligned_cols=70 Identities=9% Similarity=0.183 Sum_probs=42.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCc-----EEEEEecCCCccccChh------hhh-hcC-eeEEeEec--cCCCHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGG-----KLMLVGMGPQMVSVPLV------NAC-AKE-IDILSCFR--YVNDYPDAL 65 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G-----~iv~~g~~~~~~~~~~~------~~~-~~~-~~l~g~~~--~~~~~~~~~ 65 (112)
+|+|+.|++.......+..+++.|. +-|++ .+++..+.. ... .++ ..+.-... +...++.+.
T Consensus 109 vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~---EKPla~~~~ea~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k 185 (479)
T 2nvw_A 109 IDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYV---EWALAASVQQAEELYSISQQRANLQTIICLQGRKSPYIVRAK 185 (479)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEE---ESSSSSSHHHHHHHHHHHHTCTTCEEEEECGGGGCHHHHHHH
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEE---eCCCcCCHHHHHHHHHHHHHcCCeEEEEEeccccCHHHHHHH
Confidence 5899999988777777888887761 43444 223333322 122 234 44333332 336788888
Q ss_pred HHHHcCCC
Q psy12355 66 EMVASGKC 73 (112)
Q Consensus 66 ~~~~~g~~ 73 (112)
+++.+|.+
T Consensus 186 ~~i~~G~i 193 (479)
T 2nvw_A 186 ELISEGCI 193 (479)
T ss_dssp HHHHTTTT
T ss_pred HHHHcCCC
Confidence 99999876
No 263
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=55.31 E-value=6.4 Score=24.31 Aligned_cols=31 Identities=10% Similarity=0.011 Sum_probs=20.8
Q ss_pred CcEEEEcccC---hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGT---ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~---~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-.... ...+..+.+.|++||.++.-.
T Consensus 148 fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 4666632211 345788889999999988753
No 264
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=55.31 E-value=8.9 Score=25.33 Aligned_cols=20 Identities=10% Similarity=0.074 Sum_probs=17.1
Q ss_pred hHHHHHHHhhccCCcEEEEE
Q psy12355 11 ENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~ 30 (112)
...+..+.+.|++||.++.-
T Consensus 215 ~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 215 KPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEe
Confidence 35688899999999999986
No 265
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=55.18 E-value=8.6 Score=23.55 Aligned_cols=31 Identities=6% Similarity=0.030 Sum_probs=20.5
Q ss_pred CcEEEEcccC---hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGT---ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~---~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-.... ...+..+.+.|++||.++.-.
T Consensus 143 fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 143 YDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 4666632212 245678889999999998743
No 266
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=55.15 E-value=6.9 Score=23.95 Aligned_cols=20 Identities=10% Similarity=0.110 Sum_probs=16.7
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||++++..
T Consensus 166 ~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 166 EFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEE
Confidence 45778889999999999864
No 267
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=54.99 E-value=9.2 Score=25.40 Aligned_cols=25 Identities=8% Similarity=0.037 Sum_probs=20.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGG 25 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G 25 (112)
+|+||+|+|...+.+.+-..+..|.
T Consensus 89 vDvV~~atg~~~s~e~a~~~l~~Ga 113 (334)
T 3cmc_O 89 VDIVVESTGRFTKREDAAKHLEAGA 113 (334)
T ss_dssp CCEEEECSSSCCBHHHHTHHHHTTC
T ss_pred cCEEEECCCchhhHHHHHHHHHCCC
Confidence 5999999998777777777777776
No 268
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=54.97 E-value=7.1 Score=23.36 Aligned_cols=22 Identities=18% Similarity=0.004 Sum_probs=18.4
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+.++|++||+++.....
T Consensus 124 ~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 124 KFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHhCCCeEEEEEEec
Confidence 4678899999999999988643
No 269
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=54.93 E-value=7.4 Score=24.21 Aligned_cols=20 Identities=15% Similarity=0.278 Sum_probs=16.2
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||.++.-.
T Consensus 151 ~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 151 NYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp HHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEEEC
Confidence 34778889999999998754
No 270
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=54.82 E-value=11 Score=22.42 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=23.2
Q ss_pred EEEEcccChHHHHHHHhhccCCcEEEEE
Q psy12355 3 LYLDPLGTENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 3 ~v~d~~g~~~~~~~~~~~l~~~G~iv~~ 30 (112)
++++.+|.+.-+.+.++.|+|.| +..+
T Consensus 122 ~~ie~tg~~~ki~~~~~~l~~~g-i~e~ 148 (165)
T 2pc6_A 122 YTIELTGTRSKLDGFLQAVDCNL-ILEI 148 (165)
T ss_dssp EEEEEEECHHHHHHHHHHSCGGG-EEEE
T ss_pred EEEEEcCCHHHHHHHHHHhhhcC-CEEE
Confidence 57899999999999999999999 4444
No 271
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=54.77 E-value=9 Score=24.39 Aligned_cols=21 Identities=10% Similarity=-0.046 Sum_probs=17.8
Q ss_pred hHHHHHHHhhccCCcEEEEEe
Q psy12355 11 ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g 31 (112)
...+..+.+.|+++|.++...
T Consensus 169 ~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 169 KGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp THHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEEc
Confidence 356888999999999999874
No 272
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=54.76 E-value=12 Score=24.35 Aligned_cols=31 Identities=3% Similarity=-0.157 Sum_probs=22.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|++|++.......+..+++.|-. +++..
T Consensus 59 ~DvViiatp~~~h~~~~~~al~aG~~-Vv~ek 89 (320)
T 1f06_A 59 VDVLFLCMGSATDIPEQAPKFAQFAC-TVDTY 89 (320)
T ss_dssp CSEEEECSCTTTHHHHHHHHHTTTSE-EECCC
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCE-EEECC
Confidence 58999999876667778888877554 44443
No 273
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=54.73 E-value=8.6 Score=23.32 Aligned_cols=20 Identities=10% Similarity=0.140 Sum_probs=16.7
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||+++..-
T Consensus 125 ~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 125 RLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCcCcEEEEEe
Confidence 46788889999999998764
No 274
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=54.66 E-value=7 Score=26.17 Aligned_cols=28 Identities=7% Similarity=0.075 Sum_probs=21.4
Q ss_pred cEEEEcccChHHHHHHHhhccCCcEEEE
Q psy12355 2 MLYLDPLGTENCLTLGINVTKMGGKLML 29 (112)
Q Consensus 2 D~v~d~~g~~~~~~~~~~~l~~~G~iv~ 29 (112)
|+|+||+|+........++|+.|=+++.
T Consensus 86 DvVV~~t~~~~~a~~~~~AL~aGkhVVt 113 (358)
T 1ebf_A 86 VILVDNTSSAYIAGFYTKFVENGISIAT 113 (358)
T ss_dssp EEEEECSCCHHHHTTHHHHHHTTCEEEC
T ss_pred cEEEEcCCChHHHHHHHHHHHCCCeEEe
Confidence 7999999988666667777777666655
No 275
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=54.62 E-value=8.9 Score=23.69 Aligned_cols=20 Identities=25% Similarity=0.212 Sum_probs=15.8
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|++||++++..
T Consensus 154 ~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 154 TLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEe
Confidence 56777888899999888753
No 276
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=54.39 E-value=9.6 Score=25.30 Aligned_cols=25 Identities=8% Similarity=0.007 Sum_probs=20.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGG 25 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G 25 (112)
+|+||+|+|...+.+.+-+.++.|-
T Consensus 90 vDvV~~atg~~~s~e~a~~~l~aGa 114 (332)
T 1hdg_O 90 VDFVIESTGVFRNREKAELHLQAGA 114 (332)
T ss_dssp CCEEEECSSSCCBHHHHTHHHHTTC
T ss_pred CCEEEECCccchhHHHHHHHHHcCC
Confidence 5999999998777777777787776
No 277
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=54.33 E-value=14 Score=20.86 Aligned_cols=24 Identities=13% Similarity=0.077 Sum_probs=16.9
Q ss_pred HHHHHHH--hhccCCcEEEEEecCCC
Q psy12355 12 NCLTLGI--NVTKMGGKLMLVGMGPQ 35 (112)
Q Consensus 12 ~~~~~~~--~~l~~~G~iv~~g~~~~ 35 (112)
..+.... ++|+++|+++.......
T Consensus 126 ~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 126 ALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred HHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 4566666 88999999887654443
No 278
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=54.32 E-value=12 Score=24.86 Aligned_cols=32 Identities=9% Similarity=0.098 Sum_probs=23.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+||.|+|.....+.+-.++..|-+++..+.
T Consensus 84 ~DvV~~atp~~~~~~~a~~~~~aG~~VId~s~ 115 (354)
T 1ys4_A 84 VDIVFSALPSDLAKKFEPEFAKEGKLIFSNAS 115 (354)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred CCEEEECCCchHHHHHHHHHHHCCCEEEECCc
Confidence 59999999877666666667777777666653
No 279
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=53.91 E-value=11 Score=22.30 Aligned_cols=21 Identities=14% Similarity=0.069 Sum_probs=14.2
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|+++|+++.+..
T Consensus 145 ~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 145 RMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HHHTCCGGGBCSSSEEEEEEC
T ss_pred HHHHHHHHHhcCCCeEEEEEE
Confidence 344556788999999555543
No 280
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=53.29 E-value=12 Score=23.58 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=16.9
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|++||+++++..
T Consensus 204 ~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 204 SIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEEe
Confidence 467788899999999777654
No 281
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=53.16 E-value=10 Score=23.95 Aligned_cols=20 Identities=25% Similarity=0.526 Sum_probs=16.3
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||+++...
T Consensus 192 ~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 192 ELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEEE
Confidence 45777888999999998764
No 282
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=53.00 E-value=21 Score=21.47 Aligned_cols=20 Identities=20% Similarity=0.183 Sum_probs=16.1
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||++++..
T Consensus 134 ~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 134 HFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHHHHHHHHHTTSCEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEe
Confidence 45788888999999988764
No 283
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=52.78 E-value=9 Score=24.08 Aligned_cols=30 Identities=10% Similarity=-0.200 Sum_probs=19.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|++|+++.++-....+..+..|.-.+.
T Consensus 122 ~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~ 151 (249)
T 1jw9_B 122 HDLVLDCTDNVAVRNQLNAGCFAAKVPLVS 151 (249)
T ss_dssp SSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCEEEEeCCCHHHHHHHHHHHHHcCCCEEE
Confidence 699999998877655555555555553333
No 284
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=52.42 E-value=12 Score=24.23 Aligned_cols=20 Identities=10% Similarity=0.004 Sum_probs=17.0
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|+++|.++...
T Consensus 179 ~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 179 AFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEec
Confidence 46778899999999999875
No 285
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=52.36 E-value=13 Score=23.19 Aligned_cols=20 Identities=25% Similarity=0.441 Sum_probs=16.9
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|+++|+++.+-
T Consensus 157 ~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 157 DTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHccCCcEEEEEE
Confidence 35778889999999999874
No 286
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=52.33 E-value=9.8 Score=24.70 Aligned_cols=20 Identities=10% Similarity=0.019 Sum_probs=16.9
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||+++..-
T Consensus 152 ~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 152 YLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEE
Confidence 46788899999999999854
No 287
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=52.33 E-value=8.2 Score=25.04 Aligned_cols=20 Identities=25% Similarity=0.185 Sum_probs=16.9
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|+++|.++...
T Consensus 190 ~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 190 SYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhccCCCeEEEEec
Confidence 35788899999999999765
No 288
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=51.88 E-value=9.9 Score=24.59 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=16.9
Q ss_pred hHHHHHHHhhccCCcEEEEEe
Q psy12355 11 ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g 31 (112)
...+..+.++|+|||+++..-
T Consensus 149 ~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 149 ATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEe
Confidence 356888899999999987654
No 289
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=51.83 E-value=8.8 Score=24.74 Aligned_cols=20 Identities=10% Similarity=-0.001 Sum_probs=17.1
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|+++|.++...
T Consensus 186 ~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 186 EFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp HHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEEc
Confidence 55788899999999999874
No 290
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=51.53 E-value=15 Score=24.84 Aligned_cols=33 Identities=6% Similarity=0.010 Sum_probs=26.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+||.|+|...+.+.+-+.+..|-+++..+..
T Consensus 94 ~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~ 126 (381)
T 3hsk_A 94 CDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKN 126 (381)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHTTCEEEECCST
T ss_pred CCEEEECCChhHHHHHHHHHHhCCCEEEEcCCc
Confidence 699999998877666666777888888888743
No 291
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=51.19 E-value=32 Score=22.95 Aligned_cols=32 Identities=13% Similarity=-0.056 Sum_probs=23.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|++|++.......+..+++.|-.++.+..
T Consensus 78 ~DvVIn~~P~~~~~~v~~a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 78 FELVIGALPGFLGFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp CSCEEECCCHHHHHHHHHHHHHTTCCEEECCC
T ss_pred CCEEEECCChhhhHHHHHHHHHhCCeEEEccC
Confidence 58999998755444556678888888887764
No 292
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=51.01 E-value=11 Score=23.59 Aligned_cols=20 Identities=20% Similarity=0.419 Sum_probs=16.4
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|+++|+++++-
T Consensus 151 ~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 151 DWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEE
Confidence 44777888999999998874
No 293
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=50.92 E-value=11 Score=23.73 Aligned_cols=20 Identities=10% Similarity=0.002 Sum_probs=16.3
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||+++...
T Consensus 155 ~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 155 IAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEE
Confidence 35677888999999998765
No 294
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=50.77 E-value=23 Score=22.87 Aligned_cols=21 Identities=10% Similarity=0.097 Sum_probs=17.4
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.++|+|||++++.-.
T Consensus 253 ~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 253 RLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp HHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEEEe
Confidence 457788899999999998853
No 295
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=50.54 E-value=9 Score=23.95 Aligned_cols=22 Identities=23% Similarity=0.116 Sum_probs=17.6
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+....++|+|||+++..+..
T Consensus 178 ~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 178 AALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHHHHHTTEEEEEEEEEEEES
T ss_pred HHHHHHHHHcCCCcEEEEEEee
Confidence 3567777899999999998743
No 296
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=50.17 E-value=14 Score=23.18 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=23.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|++||.+ .|++....++.....|.=+.+|...
T Consensus 54 ~DVvIDFT-~P~a~~~~~~~~~~~g~~~ViGTTG 86 (228)
T 1vm6_A 54 PDVVIDFS-SPEALPKTVDLCKKYRAGLVLGTTA 86 (228)
T ss_dssp CSEEEECS-CGGGHHHHHHHHHHHTCEEEECCCS
T ss_pred CCEEEECC-CHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 59999998 6666666677666677767776533
No 297
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=49.80 E-value=49 Score=21.31 Aligned_cols=66 Identities=20% Similarity=0.252 Sum_probs=42.7
Q ss_pred CcEEEEcccC---hHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccCCCHHHHHHHHHcCC
Q psy12355 1 MMLYLDPLGT---ENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYVNDYPDALEMVASGK 72 (112)
Q Consensus 1 ~D~v~d~~g~---~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~g~ 72 (112)
+|+|+-+ |+ +.++...++..++.-.++++|-.. ++.+ .++..+++..+... ..+-..+++.+.+|.
T Consensus 187 ~D~viiT-gstlvN~Tl~~lL~~~~~a~~vvl~GPSt---p~~P-~lf~~Gv~~laG~~-V~d~~~~~~~i~~Gg 255 (270)
T 3l5o_A 187 CDYVYIT-CASVVDKTLPRLLELSRNARRITLVGPGT---PLAP-VLFEHGLQELSGFM-VKDNARAFRIVAGAE 255 (270)
T ss_dssp CSEEEEE-THHHHHTCHHHHHHHTTTSSEEEEESTTC---CCCG-GGGGTTCSEEEEEE-ESCHHHHHHHHTTSS
T ss_pred CCEEEEE-eehhhcCCHHHHHhhCCCCCEEEEECCCc---hhhH-HHHhcCcCEEEEEE-EcCHHHHHHHHhcCC
Confidence 5777764 33 246777888888888888998332 2222 35556777666552 245678888888874
No 298
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=49.63 E-value=15 Score=24.60 Aligned_cols=32 Identities=9% Similarity=-0.006 Sum_probs=22.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+||.|+|.......+-.+ ..|.+++.++..
T Consensus 81 ~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~ 112 (352)
T 2nqt_A 81 HDAVFLALPHGHSAVLAQQL-SPETLIIDCGAD 112 (352)
T ss_dssp CSEEEECCTTSCCHHHHHHS-CTTSEEEECSST
T ss_pred CCEEEECCCCcchHHHHHHH-hCCCEEEEECCC
Confidence 59999999876555555555 667788877744
No 299
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=49.53 E-value=19 Score=23.31 Aligned_cols=72 Identities=7% Similarity=-0.022 Sum_probs=40.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC-Ccccc---Chhhhh-hcCeeEEeEeccCCCHHHHHHHHHcCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP-QMVSV---PLVNAC-AKEIDILSCFRYVNDYPDALEMVASGKC 73 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~---~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~g~~ 73 (112)
+|+|++|++.......+..+++.| +-++..-+. ....- .+.... ..+..+.-...+...+.++.+++.+|.+
T Consensus 66 ~DvViiatp~~~h~~~~~~al~aG-~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~~~~~~i~~g~l 142 (304)
T 3bio_A 66 VDVALVCSPSREVERTALEILKKG-ICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSVVRTLMQAIV 142 (304)
T ss_dssp CCEEEECSCHHHHHHHHHHHHTTT-CEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHS
T ss_pred CCEEEECCCchhhHHHHHHHHHcC-CeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHCCCC
Confidence 599999998777777777777764 444443221 11111 111121 2333322223455678888888888865
No 300
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=49.50 E-value=16 Score=24.47 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=18.4
Q ss_pred HHHHHHhhccCCcEEEEEecCC
Q psy12355 13 CLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
.+..+.+.|++||++++++...
T Consensus 316 ~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 316 MFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp HHHHHHHHEEEEEEEEEEEETT
T ss_pred HHHHHHHhCCCCcEEEEEEECC
Confidence 4788899999999999987544
No 301
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=49.20 E-value=11 Score=24.65 Aligned_cols=21 Identities=24% Similarity=0.186 Sum_probs=16.5
Q ss_pred hHHHHHHHhhccCCcEEEEEe
Q psy12355 11 ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g 31 (112)
...+..+.+.|+++|.++.-.
T Consensus 202 ~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 202 QSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp --HHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHhhcCCCeEEEEEC
Confidence 355788899999999999864
No 302
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=48.95 E-value=9.9 Score=23.26 Aligned_cols=20 Identities=5% Similarity=0.041 Sum_probs=16.7
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|++||++++.-
T Consensus 178 ~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 178 KFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEe
Confidence 45777889999999999875
No 303
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=48.92 E-value=16 Score=21.00 Aligned_cols=20 Identities=10% Similarity=-0.066 Sum_probs=15.8
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|+++|+++..-
T Consensus 128 ~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 128 PALANIHRALGADGRAVIGF 147 (195)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEe
Confidence 45777888999999988753
No 304
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=48.81 E-value=16 Score=23.28 Aligned_cols=22 Identities=23% Similarity=0.147 Sum_probs=17.7
Q ss_pred HHHHHHhhccCCcEEEEEecCC
Q psy12355 13 CLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
.+..+.+.|+|||+++......
T Consensus 209 ~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 209 LYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp HHHHHHHHEEEEEEEEEECCCC
T ss_pred HHHHHHHhcCCCeEEEEEecCC
Confidence 4788889999999999876433
No 305
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=48.76 E-value=11 Score=26.28 Aligned_cols=19 Identities=16% Similarity=0.314 Sum_probs=15.8
Q ss_pred HHHHHHhhccCCcEEEEEe
Q psy12355 13 CLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g 31 (112)
.+..+.++|++||+++...
T Consensus 228 iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 228 LIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEec
Confidence 4677889999999998764
No 306
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=48.41 E-value=10 Score=23.97 Aligned_cols=20 Identities=30% Similarity=0.541 Sum_probs=16.7
Q ss_pred HHHHHHhhccCCcEEEEEec
Q psy12355 13 CLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~ 32 (112)
.+..+.++|+|||++++.+.
T Consensus 197 ~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 197 ALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEEe
Confidence 56778889999999999863
No 307
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=48.39 E-value=10 Score=24.04 Aligned_cols=20 Identities=10% Similarity=0.167 Sum_probs=17.2
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
.++....++|+|||++++.-
T Consensus 153 ~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 153 ATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEE
Confidence 46888999999999999864
No 308
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=48.28 E-value=25 Score=22.86 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=17.5
Q ss_pred hHHHHHHHhhccCCcEEEEE
Q psy12355 11 ENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~ 30 (112)
...+....++|+|||+++.+
T Consensus 165 ~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 165 NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GGTHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHHcCcCCEEEEE
Confidence 45688899999999999987
No 309
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=48.16 E-value=6.6 Score=24.24 Aligned_cols=19 Identities=21% Similarity=0.244 Sum_probs=15.5
Q ss_pred HHHHHHhhccCCcEEEEEe
Q psy12355 13 CLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g 31 (112)
.+..+.++|+|||+++...
T Consensus 152 ~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 152 IKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHHTHHHHEEEEEEEEECC
T ss_pred hhhhhhheeCCCCEEEEEe
Confidence 4567888999999998763
No 310
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=47.62 E-value=24 Score=21.62 Aligned_cols=27 Identities=11% Similarity=0.069 Sum_probs=23.2
Q ss_pred EEEEcccChHHHHHHHhhccCCcEEEEE
Q psy12355 3 LYLDPLGTENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 3 ~v~d~~g~~~~~~~~~~~l~~~G~iv~~ 30 (112)
++++.+|.+.-+...++.|+|.| +..+
T Consensus 148 ~~iE~tG~~~ki~a~i~~l~~~g-i~E~ 174 (193)
T 2fgc_A 148 AIIEITGARSKVEAFINLLPQKQ-VEEI 174 (193)
T ss_dssp EEEEEEECHHHHHHHHHHSCGGG-EEEE
T ss_pred EEEEEcCCHHHHHHHHHHhhhhC-CEEE
Confidence 67899999999999999999999 4444
No 311
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=47.32 E-value=31 Score=22.91 Aligned_cols=34 Identities=12% Similarity=0.043 Sum_probs=22.1
Q ss_pred CcEEEEcccC-----hHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGT-----ENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~-----~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
||+|+-..+. ...+..+.+.|++||+++.+....
T Consensus 242 fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 242 FDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp BSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred ccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 4777743211 245678899999999876665544
No 312
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=47.19 E-value=8.8 Score=23.78 Aligned_cols=18 Identities=11% Similarity=-0.040 Sum_probs=15.4
Q ss_pred HHHHHHhhccCCcEEEEE
Q psy12355 13 CLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~ 30 (112)
.+..+.+.|++||++++-
T Consensus 133 ~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 133 ALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHhcCCCcEEEEE
Confidence 477788999999999885
No 313
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=47.16 E-value=18 Score=21.59 Aligned_cols=19 Identities=0% Similarity=-0.158 Sum_probs=14.9
Q ss_pred HHHHHHHhhccCCcEEEEE
Q psy12355 12 NCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~ 30 (112)
..+..+.+.|++||.++..
T Consensus 122 ~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 122 AFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp HHHHHHHTTTCCSEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEc
Confidence 4577788899999976655
No 314
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=47.12 E-value=14 Score=22.84 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=15.1
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|++||++++..
T Consensus 149 ~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 149 TLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHCCCCCEEEEEe
Confidence 45677788888888887764
No 315
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=46.94 E-value=55 Score=21.05 Aligned_cols=66 Identities=20% Similarity=0.252 Sum_probs=43.0
Q ss_pred CcEEEEcccC---hHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccCCCHHHHHHHHHcCC
Q psy12355 1 MMLYLDPLGT---ENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYVNDYPDALEMVASGK 72 (112)
Q Consensus 1 ~D~v~d~~g~---~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~g~ 72 (112)
+|+|+-+ |+ +.++...++..++.-+++++|-.. ++.+ .++..+++..+... ..+-..+++.+.+|.
T Consensus 187 aD~viiT-GsTlvN~Ti~~lL~~~~~a~~vvl~GPS~---p~~P-~lf~~Gv~~l~G~~-V~D~~~~~~~i~~Gg 255 (270)
T 2h1q_A 187 CDYVYIT-CASVVDKTLPRLLELSRNARRITLVGPGT---PLAP-VLFEHGLQELSGFM-VKDNARAFRIVAGAE 255 (270)
T ss_dssp CSEEEEE-THHHHHTCHHHHHHHTTTSSEEEEESTTC---CCCG-GGGGTTCSEEEEEE-ESCHHHHHHHHTTSS
T ss_pred CCEEEEE-eeeeecCCHHHHHHhCccCCeEEEEecCh---hhhH-HHHhcCcCEEEEeE-ecCHHHHHHHHHcCC
Confidence 5777753 43 246777888887655888888433 2222 35567777666552 356788888888885
No 316
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=46.93 E-value=14 Score=22.50 Aligned_cols=19 Identities=16% Similarity=0.224 Sum_probs=11.8
Q ss_pred HHHHHHhhccCCcEEEEEe
Q psy12355 13 CLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g 31 (112)
.+..+.+.|+|||++++..
T Consensus 132 ~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 132 FAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEe
Confidence 4556666667777666553
No 317
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=46.90 E-value=28 Score=20.25 Aligned_cols=21 Identities=14% Similarity=-0.064 Sum_probs=15.5
Q ss_pred HHHHHHh--hccCCcEEEEEecC
Q psy12355 13 CLTLGIN--VTKMGGKLMLVGMG 33 (112)
Q Consensus 13 ~~~~~~~--~l~~~G~iv~~g~~ 33 (112)
.+....+ .|+++|+++.--..
T Consensus 133 ~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 133 ILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHHHHHhcCccCCCeEEEEEecC
Confidence 4556666 89999999886543
No 318
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=46.61 E-value=16 Score=25.25 Aligned_cols=31 Identities=16% Similarity=0.111 Sum_probs=21.2
Q ss_pred CcEEEEc-ccC-h---HHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDP-LGT-E---NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~-~g~-~---~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+-. +.. + ..+....+.|++||+++..-
T Consensus 324 FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 324 CDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp CSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred CCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 5778742 111 2 24567888999999999874
No 319
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=46.57 E-value=21 Score=23.59 Aligned_cols=29 Identities=21% Similarity=0.238 Sum_probs=21.0
Q ss_pred CcEEEEcccChH-HHHHHHhhccCCcEEEE
Q psy12355 1 MMLYLDPLGTEN-CLTLGINVTKMGGKLML 29 (112)
Q Consensus 1 ~D~v~d~~g~~~-~~~~~~~~l~~~G~iv~ 29 (112)
.|+|++|+|+.. ....+.++|+.|=.++.
T Consensus 67 iDvVve~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 67 ADLVVEAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp CSEEEECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 589999998764 34556678877766666
No 320
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=46.56 E-value=14 Score=23.20 Aligned_cols=21 Identities=14% Similarity=0.063 Sum_probs=17.1
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|+|||+++..-.
T Consensus 135 ~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 135 AAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEec
Confidence 467888999999999987643
No 321
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=46.48 E-value=28 Score=21.56 Aligned_cols=19 Identities=11% Similarity=0.246 Sum_probs=14.2
Q ss_pred HHHHHhhccCCcEEEEEec
Q psy12355 14 LTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 14 ~~~~~~~l~~~G~iv~~g~ 32 (112)
...++..++++|+|+.++.
T Consensus 130 ~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 130 VKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHhhcCCCceEEEEec
Confidence 3455667778899999974
No 322
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=45.79 E-value=12 Score=23.62 Aligned_cols=19 Identities=26% Similarity=0.183 Sum_probs=16.3
Q ss_pred HHHHHHhhccCCcEEEEEe
Q psy12355 13 CLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g 31 (112)
.+....+.|+|||++++.-
T Consensus 160 ~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 160 LLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEe
Confidence 5788899999999998763
No 323
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=45.60 E-value=29 Score=22.28 Aligned_cols=28 Identities=7% Similarity=-0.035 Sum_probs=20.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLM 28 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv 28 (112)
+|+|+.|++.......+..+++.|-.++
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~~G~~v~ 93 (319)
T 1tlt_A 66 CDAVFVHSSTASHFDVVSTLLNAGVHVC 93 (319)
T ss_dssp CSEEEECSCTTHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEeCCchhHHHHHHHHHHcCCeEE
Confidence 5899999987776777777777654333
No 324
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=45.59 E-value=19 Score=23.18 Aligned_cols=21 Identities=14% Similarity=-0.002 Sum_probs=17.7
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|+++|+++....
T Consensus 191 ~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 191 AFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEecC
Confidence 557888999999999998753
No 325
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=45.54 E-value=27 Score=21.88 Aligned_cols=32 Identities=9% Similarity=-0.122 Sum_probs=20.6
Q ss_pred CcEEEEcccChHHHHHHH----hhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGI----NVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~----~~l~~~G~iv~~g~ 32 (112)
+|+|+.|++.+..+...+ ..++++..++..+.
T Consensus 56 ~D~vi~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s~ 91 (289)
T 2cvz_A 56 ARVIFTCLPTTREVYEVAEALYPYLREGTYWVDATS 91 (289)
T ss_dssp CSEEEECCSSHHHHHHHHHHHTTTCCTTEEEEECSC
T ss_pred CCEEEEeCCChHHHHHHHHHHHhhCCCCCEEEECCC
Confidence 589999998765444443 45566666665543
No 326
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=45.53 E-value=21 Score=22.62 Aligned_cols=18 Identities=11% Similarity=-0.036 Sum_probs=14.3
Q ss_pred HHHHHHhhccCCc--EEEEE
Q psy12355 13 CLTLGINVTKMGG--KLMLV 30 (112)
Q Consensus 13 ~~~~~~~~l~~~G--~iv~~ 30 (112)
++..+.+.|+||| ++++-
T Consensus 165 ~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 165 ILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp HHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHhccCCCeEEEEE
Confidence 4666778999999 88763
No 327
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=45.42 E-value=63 Score=21.31 Aligned_cols=69 Identities=10% Similarity=0.089 Sum_probs=41.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEe--ccCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCF--RYVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~--~~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+|+.|=. |++ .+++..+..+ + -.++..+.-.. .+...++.+-+++.+|
T Consensus 84 iD~V~i~tp~~~h~~~~~~al~~Gk~-V~~---EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~~g 159 (383)
T 3oqb_A 84 DTMFFDAATTQARPGLLTQAINAGKH-VYC---EKPIATNFEEALEVVKLANSKGVKHGTVQDKLFLPGLKKIAFLRDSG 159 (383)
T ss_dssp CCEEEECSCSSSSHHHHHHHHTTTCE-EEE---CSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHHHTT
T ss_pred CCEEEECCCchHHHHHHHHHHHCCCe-EEE---cCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCHHHHHHHHHHHcC
Confidence 58999999877777778888877644 444 3334333221 2 12333332222 2336788888899998
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 160 ~i 161 (383)
T 3oqb_A 160 FF 161 (383)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 328
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=45.39 E-value=16 Score=22.76 Aligned_cols=13 Identities=31% Similarity=0.486 Sum_probs=10.7
Q ss_pred HhhccCCcEEEEE
Q psy12355 18 INVTKMGGKLMLV 30 (112)
Q Consensus 18 ~~~l~~~G~iv~~ 30 (112)
.+.|++||+++..
T Consensus 168 ~~~LkpGG~lvis 180 (232)
T 3id6_C 168 KFFLKVNGDMLLV 180 (232)
T ss_dssp HHHEEEEEEEEEE
T ss_pred HHhCCCCeEEEEE
Confidence 3489999999876
No 329
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=45.30 E-value=29 Score=21.91 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=19.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+++|++. ++.....+......|.=+.+|.
T Consensus 46 ~DvvIDfT~-p~a~~~~~~~a~~~g~~~VigT 76 (245)
T 1p9l_A 46 TEVVIDFTH-PDVVMGNLEFLIDNGIHAVVGT 76 (245)
T ss_dssp CCEEEECSC-TTTHHHHHHHHHHTTCEEEECC
T ss_pred CcEEEEccC-hHHHHHHHHHHHHcCCCEEEcC
Confidence 589999994 4444555555555555555554
No 330
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=45.30 E-value=12 Score=23.30 Aligned_cols=20 Identities=25% Similarity=0.338 Sum_probs=17.1
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|+|||.+++.-
T Consensus 123 ~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 123 EALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEE
Confidence 46788899999999999864
No 331
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=44.97 E-value=20 Score=23.48 Aligned_cols=22 Identities=18% Similarity=0.288 Sum_probs=18.0
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+.+.|++||+++++...
T Consensus 284 ~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 284 TLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp HHHHHHGGGEEEEEEEEEEEET
T ss_pred HHHHHHHHhCCCCcEEEEEEcC
Confidence 3577788999999999998753
No 332
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=44.27 E-value=20 Score=23.04 Aligned_cols=31 Identities=13% Similarity=0.020 Sum_probs=18.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|++||++....+...+..+++ .|.=+.+|.
T Consensus 74 ~DVVIDfT~p~a~~~~~~~al~-~G~~vVigT 104 (272)
T 4f3y_A 74 ADYLIDFTLPEGTLVHLDAALR-HDVKLVIGT 104 (272)
T ss_dssp CSEEEECSCHHHHHHHHHHHHH-HTCEEEECC
T ss_pred CCEEEEcCCHHHHHHHHHHHHH-cCCCEEEEC
Confidence 5999999954444444444544 455455554
No 333
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=43.21 E-value=31 Score=23.49 Aligned_cols=30 Identities=10% Similarity=0.050 Sum_probs=23.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|++++++...+..++.+++.|=+++..
T Consensus 94 iDvVV~ai~G~aGl~ptlaAi~aGK~VvlA 123 (388)
T 1r0k_A 94 ADWTMAAIIGCAGLKATLAAIRKGKTVALA 123 (388)
T ss_dssp CSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHCCCEEEEe
Confidence 589999995556678888888888777664
No 334
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=42.97 E-value=31 Score=22.02 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=20.5
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+|+|++ .+......+......|.=+.+|-+
T Consensus 73 ~DvVIDft-~p~~~~~~~~~a~~~G~~vVigTt 104 (273)
T 1dih_A 73 FDVFIDFT-RPEGTLNHLAFCRQHGKGMVIGTT 104 (273)
T ss_dssp CSEEEECS-CHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCEEEEcC-ChHHHHHHHHHHHhCCCCEEEECC
Confidence 59999999 455445555555555665666644
No 335
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=42.84 E-value=18 Score=23.11 Aligned_cols=21 Identities=19% Similarity=-0.040 Sum_probs=17.6
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|+++|.++....
T Consensus 173 ~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 173 NFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp HHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCcEEEEECC
Confidence 567888999999999998753
No 336
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=42.36 E-value=18 Score=26.26 Aligned_cols=18 Identities=22% Similarity=0.392 Sum_probs=15.4
Q ss_pred HHHHhhccCCcEEEEEec
Q psy12355 15 TLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 15 ~~~~~~l~~~G~iv~~g~ 32 (112)
..++..|+|||.++..++
T Consensus 253 ~~al~~l~pGGt~v~~~Y 270 (670)
T 4gua_A 253 RSALNCLNPGGTLVVKSY 270 (670)
T ss_dssp HHHHHTEEEEEEEEEEES
T ss_pred HHHHhhcCCCceEEEEEe
Confidence 458899999999998875
No 337
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=42.33 E-value=40 Score=20.93 Aligned_cols=47 Identities=2% Similarity=-0.010 Sum_probs=27.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKE 48 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~ 48 (112)
+|+||-+++.++. +..+...++.|..|.+...++...|-++.++.++
T Consensus 92 adLVIaAT~d~~~-N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg 138 (223)
T 3dfz_A 92 VFFIVVATNDQAV-NKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRG 138 (223)
T ss_dssp CSEEEECCCCTHH-HHHHHHHSCTTCEEEC-----CCSEECCEEEEET
T ss_pred CCEEEECCCCHHH-HHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeC
Confidence 5889999988764 5445544558888887654444444444555554
No 338
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=41.88 E-value=11 Score=22.34 Aligned_cols=20 Identities=5% Similarity=0.157 Sum_probs=16.2
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||+++..-
T Consensus 146 ~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 146 DMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp HHHHHHTTSEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEe
Confidence 45777888999999998774
No 339
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=41.66 E-value=19 Score=24.20 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=21.2
Q ss_pred CcEEE-EcccC-hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYL-DPLGT-ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~-d~~g~-~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+ |.-|. ...+..+++.++++|.++...
T Consensus 132 fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 132 FHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp EEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 35555 43333 356788999999999776654
No 340
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=41.66 E-value=25 Score=23.76 Aligned_cols=32 Identities=6% Similarity=-0.086 Sum_probs=22.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCc--EEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGG--KLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G--~iv~~g~ 32 (112)
+|++|.|+|...+.+.+-..+..|- +++..+.
T Consensus 65 ~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 65 LDAVITCQGGSYTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 5999999987666565556666653 6666653
No 341
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=41.56 E-value=16 Score=21.79 Aligned_cols=22 Identities=14% Similarity=-0.017 Sum_probs=14.8
Q ss_pred HHHHH--HhhccCCcEEEEEecCC
Q psy12355 13 CLTLG--INVTKMGGKLMLVGMGP 34 (112)
Q Consensus 13 ~~~~~--~~~l~~~G~iv~~g~~~ 34 (112)
.+... .++|+++|.++....+.
T Consensus 143 ~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 143 AISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHHHHHhcCccCCCcEEEEEECCC
Confidence 34444 34699999998776444
No 342
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=41.30 E-value=41 Score=21.25 Aligned_cols=31 Identities=6% Similarity=-0.109 Sum_probs=20.4
Q ss_pred CcEEEEcccChHHHHHHH-------hhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGI-------NVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~-------~~l~~~G~iv~~g 31 (112)
+|+|+.|++.+..+...+ ..++++..++..+
T Consensus 58 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~s 95 (287)
T 3pef_A 58 CPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMS 95 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred CCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence 589999998665455544 4566666666554
No 343
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=41.07 E-value=67 Score=20.33 Aligned_cols=67 Identities=12% Similarity=0.114 Sum_probs=42.7
Q ss_pred CcEEEEcccCh---HHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccCCCHHHHHHHHHcCC
Q psy12355 1 MMLYLDPLGTE---NCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYVNDYPDALEMVASGK 72 (112)
Q Consensus 1 ~D~v~d~~g~~---~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~g~ 72 (112)
+|+++-+ |+. .++...++..++...++.+|-. .++.+..+...+++..+... ..+-..+++.+.+|.
T Consensus 165 ~D~v~iT-GsTlvN~Ti~~lL~~~~~~~~vvl~GPS---~~~~P~~~~~~Gv~~l~g~~-v~d~~~~l~~i~~G~ 234 (249)
T 3npg_A 165 VDGIIAS-ASCIVNGTLDMILDRAKKAKLIVITGPT---GQLLPEFLKGTKVTHLASMK-VTNIEKALVKLKLGS 234 (249)
T ss_dssp CSEEEEE-TTHHHHTCHHHHHHHCSSCSEEEEESGG---GCSCGGGGTTSSCCEEEEEE-ESCHHHHHHHHHHTC
T ss_pred CCEEEEE-eeeeccCCHHHHHHhCcccCeEEEEecC---chhhHHHHhhCCccEEEEEE-ecCHHHHHHHHHccc
Confidence 5777753 443 4678888888877777888732 22233334457787666552 256677888888874
No 344
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=40.85 E-value=33 Score=22.62 Aligned_cols=30 Identities=10% Similarity=0.019 Sum_probs=19.2
Q ss_pred CcEEEEcccChH----HHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTEN----CLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~~----~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|+||+++.. ....+..+|+.|=+++.-
T Consensus 81 iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~ 114 (327)
T 3do5_A 81 YDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS 114 (327)
T ss_dssp CSEEEECCCCC----CHHHHHHHHHTTTCEEEEC
T ss_pred CCEEEECCCCcccchhHHHHHHHHHHCCCeEEec
Confidence 589999996543 256666677666555544
No 345
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=40.67 E-value=21 Score=21.27 Aligned_cols=19 Identities=5% Similarity=-0.092 Sum_probs=14.4
Q ss_pred HHHHHHhhccCCcEEEEEe
Q psy12355 13 CLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g 31 (112)
.+....+.|+|||+++++.
T Consensus 122 ~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 122 YVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HHHHHHHHSCSEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEE
Confidence 4667888999999955444
No 346
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=40.66 E-value=13 Score=24.88 Aligned_cols=19 Identities=32% Similarity=0.471 Sum_probs=15.5
Q ss_pred HHHHHHhhccCCcEEEEEe
Q psy12355 13 CLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g 31 (112)
.+..+++++++||++|..-
T Consensus 266 iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 266 LLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp HHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHhcCCCCcEEEEEe
Confidence 4667889999999988654
No 347
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=40.52 E-value=40 Score=23.44 Aligned_cols=29 Identities=21% Similarity=0.389 Sum_probs=22.2
Q ss_pred CcEEEEcccChH-HHHHHHhhccCCcEEEE
Q psy12355 1 MMLYLDPLGTEN-CLTLGINVTKMGGKLML 29 (112)
Q Consensus 1 ~D~v~d~~g~~~-~~~~~~~~l~~~G~iv~ 29 (112)
+|+|++|+|++. ....+..+++.|=.++.
T Consensus 108 IDaVviaTp~p~~H~e~a~~AL~AGKHVv~ 137 (446)
T 3upl_A 108 IDVIIDATGIPEVGAETGIAAIRNGKHLVM 137 (446)
T ss_dssp CCEEEECSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEcCCChHHHHHHHHHHHHcCCcEEe
Confidence 589999998864 46778888887766664
No 348
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=40.36 E-value=24 Score=21.46 Aligned_cols=23 Identities=13% Similarity=0.017 Sum_probs=18.4
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.+.|++||++++.-...
T Consensus 144 ~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 144 LLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECT
T ss_pred HHHHHHHHHcCCCCEEEEEeCCc
Confidence 46788889999999988876543
No 349
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=40.19 E-value=44 Score=21.37 Aligned_cols=31 Identities=3% Similarity=-0.088 Sum_probs=20.7
Q ss_pred CcEEEEcccChHHHHHHH-------hhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGI-------NVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~-------~~l~~~G~iv~~g 31 (112)
+|+|+.|++.+..+...+ ..++++..++..+
T Consensus 87 ~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s 124 (316)
T 2uyy_A 87 CDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMS 124 (316)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred CCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECC
Confidence 589999998666555554 3455666666565
No 350
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=40.03 E-value=26 Score=24.36 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=16.1
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+...++.|+|||+++..-
T Consensus 269 ~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 269 HQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp HHHHHHHTTSCTTCEEEESS
T ss_pred HHHHHHHHcCCCCcEEEEee
Confidence 35666788999999999874
No 351
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=39.93 E-value=18 Score=25.14 Aligned_cols=20 Identities=20% Similarity=0.205 Sum_probs=16.2
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|++||+++..-
T Consensus 210 ~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 210 ALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp HHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEe
Confidence 35778889999999998653
No 352
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=39.83 E-value=9.4 Score=25.01 Aligned_cols=39 Identities=5% Similarity=0.046 Sum_probs=25.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVP 40 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~ 40 (112)
+|+|+.|+++...+- ....+++|-.+..+|.+.. ..+++
T Consensus 188 aDvVi~aTp~~~pv~-~~~~l~~G~~V~~ig~~~p~~~el~ 227 (322)
T 1omo_A 188 CDVLVTTTPSRKPVV-KAEWVEEGTHINAIGADGPGKQELD 227 (322)
T ss_dssp SSEEEECCCCSSCCB-CGGGCCTTCEEEECSCCSTTCCCBC
T ss_pred CCEEEEeeCCCCcee-cHHHcCCCeEEEECCCCCCCccccC
Confidence 589999997654221 1367888888888875543 34444
No 353
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=39.83 E-value=47 Score=21.16 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=23.7
Q ss_pred CcEEEEc-ccC----hHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDP-LGT----ENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~-~g~----~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
||+||-+ ++. +..+....++++.||-++.+|.+.
T Consensus 51 yDvIIl~d~~~~~l~~~~~~~L~~yV~~GGgLi~~gG~~ 89 (259)
T 3rht_A 51 QDLVILSDYPAERMTAQAIDQLVTMVKAGCGLVMLGGWE 89 (259)
T ss_dssp CSEEEEESCCGGGBCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCEEEEcCCccccCCHHHHHHHHHHHHhCCeEEEecCcc
Confidence 5777643 332 345667778899999999998543
No 354
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=39.53 E-value=24 Score=23.69 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=18.5
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.+.|++||+++++....
T Consensus 321 ~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 321 AFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp HHHHHHHHHEEEEEEEEEEECTT
T ss_pred HHHHHHHHhcCcCcEEEEEEcCC
Confidence 35777889999999999987544
No 355
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=39.53 E-value=14 Score=22.59 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=16.0
Q ss_pred HHHHHHHhhccCCcEEEEE
Q psy12355 12 NCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~ 30 (112)
..+....++|+|||++++.
T Consensus 120 ~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 120 DILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp HHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEE
Confidence 4577888999999999984
No 356
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=39.44 E-value=28 Score=23.56 Aligned_cols=32 Identities=6% Similarity=-0.087 Sum_probs=22.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCc--EEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGG--KLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G--~iv~~g~ 32 (112)
+|+||.|+|...+...+-..+..|- +++..+.
T Consensus 69 vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 69 CDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 5999999987666555556666653 6666653
No 357
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=39.43 E-value=21 Score=23.30 Aligned_cols=21 Identities=19% Similarity=0.018 Sum_probs=17.5
Q ss_pred hHHHHHHHhhccCCcEEEEEe
Q psy12355 11 ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g 31 (112)
...+..+.+.|+++|.++...
T Consensus 210 ~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 210 QNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEc
Confidence 356788899999999999864
No 358
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=39.29 E-value=17 Score=22.26 Aligned_cols=21 Identities=29% Similarity=0.181 Sum_probs=17.1
Q ss_pred HHHHHHhhccCCcEEEEEecC
Q psy12355 13 CLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~~ 33 (112)
.+..+.++|+|||+++.....
T Consensus 180 ~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 180 ALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHHHHTTEEEEEEEEEEEES
T ss_pred HHHHHHhhCCCCcEEEEEecC
Confidence 567778899999999988743
No 359
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=38.81 E-value=18 Score=21.78 Aligned_cols=20 Identities=10% Similarity=0.159 Sum_probs=17.1
Q ss_pred HHHHHHhhccCCcEEEEEec
Q psy12355 13 CLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~ 32 (112)
.+..+.+.|+|||+++..-.
T Consensus 130 ~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 130 LYKRSYSILKESGIFINADL 149 (234)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEe
Confidence 67888999999999998754
No 360
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=38.67 E-value=39 Score=21.57 Aligned_cols=29 Identities=14% Similarity=0.010 Sum_probs=21.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|+.|++.......+..+++.|-. +++
T Consensus 67 ~D~V~i~tp~~~h~~~~~~al~~gk~-vl~ 95 (308)
T 3uuw_A 67 CDCIFLHSSTETHYEIIKILLNLGVH-VYV 95 (308)
T ss_dssp CSEEEECCCGGGHHHHHHHHHHTTCE-EEE
T ss_pred CCEEEEeCCcHhHHHHHHHHHHCCCc-EEE
Confidence 58999999887777777777776654 444
No 361
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=38.57 E-value=22 Score=23.03 Aligned_cols=20 Identities=15% Similarity=0.074 Sum_probs=17.0
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|+++|.++...
T Consensus 176 ~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 176 EFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEc
Confidence 45888999999999999764
No 362
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=38.43 E-value=27 Score=22.66 Aligned_cols=31 Identities=10% Similarity=0.056 Sum_probs=18.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+++|++....+...+..+++.| .=+.+|.
T Consensus 89 aDVvIDFT~p~a~~~~~~~~l~~G-v~vViGT 119 (288)
T 3ijp_A 89 TEGILDFSQPQASVLYANYAAQKS-LIHIIGT 119 (288)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHT-CEEEECC
T ss_pred CCEEEEcCCHHHHHHHHHHHHHcC-CCEEEEC
Confidence 599999994434444444455554 4444553
No 363
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=38.42 E-value=15 Score=24.08 Aligned_cols=41 Identities=7% Similarity=-0.045 Sum_probs=27.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCC-ccccChh
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQ-MVSVPLV 42 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~ 42 (112)
+|+|+.|++....+-. -+.+++|-.++.+|.... ..+++..
T Consensus 184 aDIVi~aT~s~~pvl~-~~~l~~G~~V~~vGs~~p~~~El~~~ 225 (313)
T 3hdj_A 184 ADIVVTATRSTTPLFA-GQALRAGAFVGAIGSSLPHTRELDDE 225 (313)
T ss_dssp CSEEEECCCCSSCSSC-GGGCCTTCEEEECCCSSTTCCCCCHH
T ss_pred CCEEEEccCCCCcccC-HHHcCCCcEEEECCCCCCchhhcCHH
Confidence 5999999977543221 357899999999986543 3445543
No 364
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=38.33 E-value=20 Score=22.92 Aligned_cols=20 Identities=15% Similarity=0.044 Sum_probs=16.0
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|+|||.++..-
T Consensus 136 ~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 136 MMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp HHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEec
Confidence 45777888999999988664
No 365
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=38.33 E-value=49 Score=21.11 Aligned_cols=31 Identities=10% Similarity=0.067 Sum_probs=20.3
Q ss_pred CcEEEEcccChHHHHHHH-------hhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGI-------NVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~-------~~l~~~G~iv~~g 31 (112)
+|+|+.|++.+..+...+ ..++++..++..+
T Consensus 65 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 65 VDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp CSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 589999998765555554 4456666666554
No 366
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=38.15 E-value=42 Score=19.43 Aligned_cols=10 Identities=20% Similarity=0.105 Sum_probs=4.8
Q ss_pred cEEEEcccCh
Q psy12355 2 MLYLDPLGTE 11 (112)
Q Consensus 2 D~v~d~~g~~ 11 (112)
|+++.|++..
T Consensus 107 d~vi~~~~~~ 116 (183)
T 3c85_A 107 KLVLLAMPHH 116 (183)
T ss_dssp CEEEECCSSH
T ss_pred CEEEEeCCCh
Confidence 4455555443
No 367
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=37.92 E-value=38 Score=23.45 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=19.2
Q ss_pred CcEEEEcccC-hHHHHHHHhhccCCcEEEE
Q psy12355 1 MMLYLDPLGT-ENCLTLGINVTKMGGKLML 29 (112)
Q Consensus 1 ~D~v~d~~g~-~~~~~~~~~~l~~~G~iv~ 29 (112)
+|+|++|+|+ ......+.++|+.|=.++.
T Consensus 79 iDvVve~tp~~~~h~~~~~~AL~aGKhVvt 108 (444)
T 3mtj_A 79 IDIVVELIGGLEPARELVMQAIANGKHVVT 108 (444)
T ss_dssp CCEEEECCCSSTTHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEcCCCchHHHHHHHHHHHcCCEEEE
Confidence 4899999986 4545666667766655443
No 368
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=37.81 E-value=50 Score=20.94 Aligned_cols=31 Identities=6% Similarity=-0.106 Sum_probs=19.9
Q ss_pred CcEEEEcccChHHHHHHHh-------hccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGIN-------VTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~-------~l~~~G~iv~~g 31 (112)
+|+|+.|++.+..+...+. .++++..++..+
T Consensus 60 aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~s 97 (302)
T 2h78_A 60 ADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECS 97 (302)
T ss_dssp CSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECS
T ss_pred CCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECC
Confidence 5899999977655555553 455555555544
No 369
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=37.80 E-value=37 Score=19.32 Aligned_cols=23 Identities=4% Similarity=-0.201 Sum_probs=15.7
Q ss_pred HHHHHH--hhccCCcEEEEEecCCC
Q psy12355 13 CLTLGI--NVTKMGGKLMLVGMGPQ 35 (112)
Q Consensus 13 ~~~~~~--~~l~~~G~iv~~g~~~~ 35 (112)
.+.... +.|+++|.++..-....
T Consensus 118 ~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 118 TIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHHHhCCCcCCCcEEEEEECCcc
Confidence 344444 88999999987754443
No 370
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=37.79 E-value=41 Score=22.04 Aligned_cols=29 Identities=24% Similarity=0.309 Sum_probs=20.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|+.|++.......+..+++.| +-|++
T Consensus 72 ~D~V~i~tp~~~h~~~~~~al~aG-k~V~~ 100 (362)
T 1ydw_A 72 IDALYVPLPTSLHVEWAIKAAEKG-KHILL 100 (362)
T ss_dssp CCEEEECCCGGGHHHHHHHHHTTT-CEEEE
T ss_pred CCEEEEcCChHHHHHHHHHHHHCC-CeEEE
Confidence 589999998776667677777665 43444
No 371
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=37.74 E-value=57 Score=19.16 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=21.4
Q ss_pred CcEEEEcccCh--------HHHHHHHhhccC--CcEEEEEec
Q psy12355 1 MMLYLDPLGTE--------NCLTLGINVTKM--GGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~--------~~~~~~~~~l~~--~G~iv~~g~ 32 (112)
+|+||.++|.. ......++.++. .++++.++.
T Consensus 62 ~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 62 QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 58999998764 223456666655 478888863
No 372
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=37.65 E-value=16 Score=21.87 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=16.6
Q ss_pred hHHHHHHHhhccCCcEEEEE
Q psy12355 11 ENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~ 30 (112)
...+..+.+.|+|||+++..
T Consensus 120 ~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 120 PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp SHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEE
Confidence 45678889999999998873
No 373
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=37.21 E-value=88 Score=20.59 Aligned_cols=56 Identities=14% Similarity=0.042 Sum_probs=33.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh-hhhcCeeEEeEecc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN-ACAKEIDILSCFRY 57 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~l~g~~~~ 57 (112)
+|+|++|+|......-+-.|++.+-.++.++...+.. ..+.. .-.+++++.-..+.
T Consensus 78 ~DvVi~~~p~~~~~~v~~~~~~~g~~yvD~s~~~~~~-~~l~~~a~~~g~~~i~~~G~ 134 (365)
T 3abi_A 78 FELVIGALPGFLGFKSIKAAIKSKVDMVDVSFMPENP-LELRDEAEKAQVTIVFDAGF 134 (365)
T ss_dssp CSEEEECCCGGGHHHHHHHHHHHTCEEEECCCCSSCG-GGGHHHHHHTTCEEECCCBT
T ss_pred CCEEEEecCCcccchHHHHHHhcCcceEeeeccchhh-hhhhhhhccCCceeeecCCC
Confidence 5899999987655566667888888888876433211 12222 33455555554443
No 374
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=37.15 E-value=16 Score=23.78 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=25.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|++|.++|.+..+. -+.+++|..++.+|...
T Consensus 205 ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 205 ADLVVVAAGKPGLVK--GEWIKEGAIVIDVGINR 236 (286)
T ss_dssp CSEEEECCCCTTCBC--GGGSCTTCEEEECCSCS
T ss_pred CCEEEECCCCCCCCC--HHHcCCCeEEEEecccc
Confidence 699999999876443 36689999999998654
No 375
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=37.15 E-value=30 Score=22.82 Aligned_cols=30 Identities=13% Similarity=-0.002 Sum_probs=20.6
Q ss_pred CcEEEEcccCh----HHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTE----NCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~----~~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|+||+++. .+...+.++|+.|=+++..
T Consensus 83 iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta 116 (325)
T 3ing_A 83 ADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA 116 (325)
T ss_dssp CSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEECCCCccccchHHHHHHHHHHCCCeEEEc
Confidence 58999999653 2356677777777666653
No 376
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=37.04 E-value=23 Score=21.51 Aligned_cols=21 Identities=14% Similarity=0.157 Sum_probs=17.5
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.++|+|||+++....
T Consensus 121 ~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 121 ELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp HHHHHHHHHBCTTCCEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEeC
Confidence 567888999999999987653
No 377
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=37.02 E-value=30 Score=22.13 Aligned_cols=69 Identities=7% Similarity=-0.034 Sum_probs=41.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh------h-hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN------A-CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~------~-~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|=. |++ .+++..+..+ + -.++..+.-... +...++.+-+++.+|
T Consensus 66 vD~V~i~tp~~~H~~~~~~al~aGkh-Vl~---EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g 141 (294)
T 1lc0_A 66 IDVAYICSESSSHEDYIRQFLQAGKH-VLV---EYPMTLSFAAAQELWELAAQKGRVLHEEHVELLMEEFEFLRREVLGK 141 (294)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHTTCE-EEE---ESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHTTC
T ss_pred CCEEEEeCCcHhHHHHHHHHHHCCCc-EEE---eCCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhccHHHHHHHHHHhcC
Confidence 48999999887778888888877544 333 2333333321 1 123444333332 235677777888777
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 142 ~i 143 (294)
T 1lc0_A 142 EL 143 (294)
T ss_dssp CE
T ss_pred Ce
Confidence 65
No 378
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=36.83 E-value=47 Score=21.09 Aligned_cols=19 Identities=11% Similarity=0.177 Sum_probs=13.9
Q ss_pred HHHHHhhccCCcEEEEEec
Q psy12355 14 LTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 14 ~~~~~~~l~~~G~iv~~g~ 32 (112)
...++..++++|+|+.++.
T Consensus 152 ~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 152 SRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHhccCCCEEEEEee
Confidence 3445566778999999974
No 379
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=36.72 E-value=42 Score=22.07 Aligned_cols=69 Identities=10% Similarity=0.200 Sum_probs=42.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeE--EeEe-ccCCCHHHHHHHHHc
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDI--LSCF-RYVNDYPDALEMVAS 70 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l--~g~~-~~~~~~~~~~~~~~~ 70 (112)
+|+|+.|++.......+..+++.|-. +++- +++..+..+ + -.++..+ .+.. .+...++++-+++.+
T Consensus 88 ~D~V~i~tp~~~h~~~~~~al~aGk~-Vl~E---KPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~ 163 (357)
T 3ec7_A 88 VEVVIITASNEAHADVAVAALNANKY-VFCE---KPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDS 163 (357)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCE-EEEE---SSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHHH
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCC-EEee---cCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHhc
Confidence 58999999888777888888887644 4442 233333221 2 2234433 2332 244678888888888
Q ss_pred CCC
Q psy12355 71 GKC 73 (112)
Q Consensus 71 g~~ 73 (112)
|.+
T Consensus 164 g~i 166 (357)
T 3ec7_A 164 GEI 166 (357)
T ss_dssp TTT
T ss_pred CCC
Confidence 876
No 380
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=36.18 E-value=13 Score=24.21 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=24.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|++|.++|.+..+. -+.+++|..++.+|...
T Consensus 205 ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 205 ADILIVAVGKPNFIT--ADMVKEGAVVIDVGINH 236 (285)
T ss_dssp CSEEEECCCCTTCBC--GGGSCTTCEEEECCCEE
T ss_pred CCEEEECCCCCCCCC--HHHcCCCcEEEEecccC
Confidence 699999999876443 36689998888898643
No 381
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=36.11 E-value=22 Score=20.63 Aligned_cols=21 Identities=24% Similarity=0.230 Sum_probs=16.8
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|++||+++.+..
T Consensus 117 ~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 117 GLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEEe
Confidence 357778899999999887753
No 382
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=36.09 E-value=31 Score=22.50 Aligned_cols=21 Identities=19% Similarity=0.270 Sum_probs=17.6
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|+|||++++.-.
T Consensus 267 ~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 267 RILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp HHHHHHHHTCCTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEEEe
Confidence 467888899999999998754
No 383
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=36.07 E-value=41 Score=21.56 Aligned_cols=28 Identities=4% Similarity=0.042 Sum_probs=20.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLM 28 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv 28 (112)
+|+|+.|++.......+..+++.|-.++
T Consensus 70 ~D~V~i~tp~~~h~~~~~~al~~Gk~v~ 97 (315)
T 3c1a_A 70 VEAVIIATPPATHAEITLAAIASGKAVL 97 (315)
T ss_dssp CCEEEEESCGGGHHHHHHHHHHTTCEEE
T ss_pred CCEEEEeCChHHHHHHHHHHHHCCCcEE
Confidence 5899999987766677777777654433
No 384
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=36.02 E-value=51 Score=20.64 Aligned_cols=18 Identities=28% Similarity=0.578 Sum_probs=13.1
Q ss_pred HHHHhhccCCcEEEEEec
Q psy12355 15 TLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 15 ~~~~~~l~~~G~iv~~g~ 32 (112)
..+++.++.+|+++.++.
T Consensus 147 ~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 147 REAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHHHHHSCTTCEEEEECC
T ss_pred HHHHHHHhcCCeEEEEec
Confidence 445556667899999974
No 385
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=35.74 E-value=44 Score=19.99 Aligned_cols=13 Identities=15% Similarity=0.235 Sum_probs=10.5
Q ss_pred hhccCCcEEEEEe
Q psy12355 19 NVTKMGGKLMLVG 31 (112)
Q Consensus 19 ~~l~~~G~iv~~g 31 (112)
+.|+|||.++.-.
T Consensus 158 ~~LkpgG~lv~~~ 170 (221)
T 3u81_A 158 GLLRKGTVLLADN 170 (221)
T ss_dssp TCCCTTCEEEESC
T ss_pred cccCCCeEEEEeC
Confidence 7899999987654
No 386
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=35.59 E-value=46 Score=21.41 Aligned_cols=69 Identities=7% Similarity=0.017 Sum_probs=38.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh------hhh-hcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV------NAC-AKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~~~-~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.|=. +++-- ++..+.. ... .++..+.-... +...++.+-+++.+|
T Consensus 63 ~D~V~i~tp~~~h~~~~~~al~~gk~-V~~EK---P~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~G 138 (325)
T 2ho3_A 63 FDLVYIASPNSLHFAQAKAALSAGKH-VILEK---PAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLADX 138 (325)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCE-EEEES---SCCSSHHHHHHHHHHHHHTTCCEEEECTTTTCHHHHHHHHHHTTS
T ss_pred CCEEEEeCChHHHHHHHHHHHHcCCc-EEEec---CCcCCHHHHHHHHHHHHHcCCEEEEEEhhhcChHHHHHHHHhhhc
Confidence 58999999877666777777776544 33432 2222221 111 23444433332 235677777777777
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
++
T Consensus 139 ~i 140 (325)
T 2ho3_A 139 QV 140 (325)
T ss_dssp CE
T ss_pred Cc
Confidence 54
No 387
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=35.58 E-value=11 Score=24.72 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=24.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|++|-++|.+..+. -+.+++|..++.+|...
T Consensus 209 ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 209 GDILVVATGQPEMVK--GEWIKPGAIVIDCGINY 240 (301)
T ss_dssp CSEEEECCCCTTCBC--GGGSCTTCEEEECCCBC
T ss_pred CCEEEECCCCcccCC--HHHcCCCcEEEEccCCC
Confidence 699999999876433 34588999999999653
No 388
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=35.55 E-value=53 Score=20.02 Aligned_cols=16 Identities=6% Similarity=-0.093 Sum_probs=11.7
Q ss_pred eCcccHHHHHHHHhcC
Q psy12355 83 FKLEEAVEAFKTASKK 98 (112)
Q Consensus 83 ~~l~~~~~a~~~~~~~ 98 (112)
...+|+.++...+.+.
T Consensus 217 ~~~~dvA~~~~~l~~~ 232 (257)
T 1fjh_A 217 AEPSEMASVIAFLMSP 232 (257)
T ss_dssp CCTHHHHHHHHHHTSG
T ss_pred CCHHHHHHHHHHHhCc
Confidence 4678888888777654
No 389
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=35.44 E-value=39 Score=22.47 Aligned_cols=22 Identities=23% Similarity=0.191 Sum_probs=16.8
Q ss_pred HHHHHHhhccCCcEEEEEecCC
Q psy12355 13 CLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
.+..+++.|+++|.++....+.
T Consensus 307 ~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 307 VNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp HHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHHhcCCCCEEEEEECCC
Confidence 5677888999999988776443
No 390
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=35.34 E-value=41 Score=20.75 Aligned_cols=21 Identities=10% Similarity=0.284 Sum_probs=17.2
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+.+.|+ ||+++.....
T Consensus 112 ~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 112 KSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp HHHHHHHHHBC-SSCEEEEEEC
T ss_pred HHHHHHHHHhC-CcEEEEEEcC
Confidence 46888999999 9998887654
No 391
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=35.13 E-value=59 Score=20.85 Aligned_cols=31 Identities=6% Similarity=-0.077 Sum_probs=20.1
Q ss_pred CcEEEEcccChHHHHHHH-------hhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGI-------NVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~-------~~l~~~G~iv~~g 31 (112)
+|+||.|++.+..+...+ ..++++..++..+
T Consensus 78 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~s 115 (310)
T 3doj_A 78 CKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMS 115 (310)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred CCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECC
Confidence 589999998765555544 3455666666554
No 392
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=35.13 E-value=64 Score=21.13 Aligned_cols=20 Identities=5% Similarity=-0.046 Sum_probs=15.2
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|+++|.++...
T Consensus 253 ~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 253 LMLDICREILSPKALGLVLT 272 (332)
T ss_dssp HHHHHHHHTBCTTCCEEEEE
T ss_pred HHHHHHHHhcCcCcEEEEEE
Confidence 45777889999999966554
No 393
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=34.90 E-value=14 Score=24.25 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=24.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|++|.++|.+..+. -+.+++|..++.+|..
T Consensus 211 ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 211 ADIVIAAMGQPGYVK--GEWIKEGAAVVDVGTT 241 (300)
T ss_dssp CSEEEECSCCTTCBC--GGGSCTTCEEEECCCE
T ss_pred CCEEEECCCCCCCCc--HHhcCCCcEEEEEecc
Confidence 699999999876444 3568999999999864
No 394
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=34.67 E-value=12 Score=25.28 Aligned_cols=34 Identities=9% Similarity=0.135 Sum_probs=24.0
Q ss_pred CcEEEEcccChHH----HHHHHhhcc-CCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENC----LTLGINVTK-MGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~----~~~~~~~l~-~~G~iv~~g~~~ 34 (112)
+|+|+||+|.-.+ .+.+-..++ .|.+=|++..+.
T Consensus 108 vDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps 146 (356)
T 3hja_A 108 IDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPA 146 (356)
T ss_dssp CSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCC
T ss_pred CCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCC
Confidence 5899999997555 566777777 677656665543
No 395
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=34.55 E-value=61 Score=20.44 Aligned_cols=31 Identities=10% Similarity=0.122 Sum_probs=20.5
Q ss_pred CcEEEEcccChHHHHHHH-------hhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGI-------NVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~-------~~l~~~G~iv~~g 31 (112)
+|+|+.|++.+..+...+ ..++++..++..+
T Consensus 61 ~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~ 98 (301)
T 3cky_A 61 SDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMS 98 (301)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECC
T ss_pred CCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECC
Confidence 589999997766555544 3466666666654
No 396
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=34.31 E-value=14 Score=23.90 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=24.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|++|.++|.+..+. -+.+++|..++.+|...
T Consensus 194 ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 194 SKIVVVAVGRPGFLN--REMVTPGSVVIDVGINY 225 (276)
T ss_dssp SSEEEECSSCTTCBC--GGGCCTTCEEEECCCEE
T ss_pred CCEEEECCCCCcccc--HhhccCCcEEEEeccCc
Confidence 699999999876444 35679999888998643
No 397
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=34.30 E-value=49 Score=20.78 Aligned_cols=30 Identities=13% Similarity=-0.080 Sum_probs=18.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+++|++ .++.....++ + ..|.-+.+|..
T Consensus 55 ~DVvIDft-~p~a~~~~~~-l-~~g~~vVigTT 84 (243)
T 3qy9_A 55 ADVAIDFS-NPNLLFPLLD-E-DFHLPLVVATT 84 (243)
T ss_dssp CSEEEECS-CHHHHHHHHT-S-CCCCCEEECCC
T ss_pred CCEEEEeC-ChHHHHHHHH-H-hcCCceEeCCC
Confidence 58999998 4555555566 4 45554556643
No 398
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=34.24 E-value=30 Score=22.87 Aligned_cols=20 Identities=15% Similarity=0.092 Sum_probs=17.1
Q ss_pred HHHHHHhhccCCcEEEEEec
Q psy12355 13 CLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~ 32 (112)
.+..+.++|+|||+++++-.
T Consensus 282 ~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 282 LLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp HHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHcCCCCEEEEEEe
Confidence 57788899999999998864
No 399
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=34.09 E-value=24 Score=20.92 Aligned_cols=21 Identities=29% Similarity=0.316 Sum_probs=17.5
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.++|++||+++....
T Consensus 132 ~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 132 DFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHhCCCCeEEEEEEc
Confidence 567888899999999998753
No 400
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=33.66 E-value=48 Score=20.62 Aligned_cols=21 Identities=14% Similarity=0.232 Sum_probs=15.6
Q ss_pred HHHHHhhccCCcEEEEEecCC
Q psy12355 14 LTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 14 ~~~~~~~l~~~G~iv~~g~~~ 34 (112)
...++..++++|+++.++...
T Consensus 135 ~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 135 AREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp HHHHHHHCCTTCEEEEECCTT
T ss_pred HHHHHHHHhcCCeEEEEeCch
Confidence 455667778899999998533
No 401
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=33.63 E-value=56 Score=20.59 Aligned_cols=20 Identities=5% Similarity=-0.228 Sum_probs=15.1
Q ss_pred HHHHHHHhhcc---C--CcEEEEEe
Q psy12355 12 NCLTLGINVTK---M--GGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~---~--~G~iv~~g 31 (112)
..+..+.++|+ + +|+++++-
T Consensus 181 ~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 181 ALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred HHHHHHHHHhcccCCCCCCEEEEEE
Confidence 45677778899 9 99977654
No 402
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=33.62 E-value=10 Score=25.04 Aligned_cols=32 Identities=13% Similarity=0.100 Sum_probs=24.1
Q ss_pred CcEEEEcccChHH-HHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENC-LTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~-~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+||-++|.+.. +. -+.+++|..++.+|.+.
T Consensus 246 ADIVIsAtg~p~~vI~--~e~vk~GavVIDVgi~r 278 (320)
T 1edz_A 246 SDVVITGVPSENYKFP--TEYIKEGAVCINFACTK 278 (320)
T ss_dssp CSEEEECCCCTTCCBC--TTTSCTTEEEEECSSSC
T ss_pred CCEEEECCCCCcceeC--HHHcCCCeEEEEcCCCc
Confidence 6999999998763 33 24478888888888765
No 403
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=33.46 E-value=64 Score=20.31 Aligned_cols=31 Identities=6% Similarity=-0.104 Sum_probs=19.7
Q ss_pred CcEEEEcccChHHHHHHH-------hhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGI-------NVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~-------~~l~~~G~iv~~g 31 (112)
+|+|+.|++.+..+...+ ..++++..++..+
T Consensus 58 advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~s 95 (287)
T 3pdu_A 58 CDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMS 95 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECS
T ss_pred CCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECC
Confidence 589999998764455544 3455665565554
No 404
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=33.45 E-value=25 Score=20.61 Aligned_cols=21 Identities=19% Similarity=0.085 Sum_probs=16.7
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|++||+++..-.
T Consensus 109 ~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 109 EAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEEe
Confidence 356778889999999987754
No 405
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=33.45 E-value=34 Score=22.06 Aligned_cols=21 Identities=14% Similarity=0.256 Sum_probs=17.6
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|+|||++++.-.
T Consensus 255 ~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 255 AILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp HHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEEee
Confidence 467888899999999998764
No 406
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=33.39 E-value=57 Score=18.78 Aligned_cols=29 Identities=17% Similarity=0.179 Sum_probs=20.4
Q ss_pred EEEEcccChHHHHHHHhhcc---CCcEEEEEe
Q psy12355 3 LYLDPLGTENCLTLGINVTK---MGGKLMLVG 31 (112)
Q Consensus 3 ~v~d~~g~~~~~~~~~~~l~---~~G~iv~~g 31 (112)
++.|..-+|..+..+++.++ +++|++.+-
T Consensus 39 vi~DyaHnP~si~a~l~al~~~~~~~riivvf 70 (163)
T 3mvn_A 39 VYDDFAHHPTAITATIDALRAKVGQQRILAVL 70 (163)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 66776557777888888877 356776553
No 407
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=33.35 E-value=33 Score=20.21 Aligned_cols=23 Identities=22% Similarity=0.247 Sum_probs=18.4
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.+.|++||+++......
T Consensus 113 ~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 113 RVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHHcCCCCEEEEEecCC
Confidence 46788889999999999876443
No 408
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=33.15 E-value=53 Score=21.17 Aligned_cols=67 Identities=4% Similarity=-0.119 Sum_probs=41.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEec--cCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCFR--YVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~~--~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+|+.| +-|++ .+++..+..+ + -.++..+..... +...+..+-+++.+|
T Consensus 73 vD~V~I~tP~~~H~~~~~~al~aG-khVl~---EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g 148 (312)
T 3o9z_A 73 VDYLSIASPNHLHYPQIRMALRLG-ANALS---EKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLGQE 148 (312)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSSSCSCHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHHHTC
T ss_pred CcEEEECCCchhhHHHHHHHHHCC-CeEEE---ECCCCCCHHHHHHHHHHHHHcCCEEEEEeehhcCHHHHHHHHHHHcC
Confidence 589999998877778888888876 44444 4444444322 2 123443333332 336778888888887
No 409
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=33.11 E-value=38 Score=21.19 Aligned_cols=26 Identities=8% Similarity=-0.256 Sum_probs=16.1
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGK 26 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~ 26 (112)
+|+|++|+.+..+....-+.....|+
T Consensus 119 ~DvVi~~~d~~~~r~~l~~~~~~~~~ 144 (251)
T 1zud_1 119 ADVVLDCTDNMATRQEINAACVALNT 144 (251)
T ss_dssp CSEEEECCSSHHHHHHHHHHHHHTTC
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCC
Confidence 69999999876654433344444444
No 410
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=32.98 E-value=26 Score=20.86 Aligned_cols=21 Identities=19% Similarity=0.131 Sum_probs=16.9
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|++||+++....
T Consensus 123 ~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 123 QVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEec
Confidence 357778899999999988743
No 411
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=32.72 E-value=32 Score=22.63 Aligned_cols=21 Identities=10% Similarity=-0.115 Sum_probs=17.1
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
+.+..+.+.|+++|.++....
T Consensus 181 efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 181 EFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEec
Confidence 457888999999999986653
No 412
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=32.40 E-value=25 Score=21.17 Aligned_cols=21 Identities=29% Similarity=0.211 Sum_probs=17.3
Q ss_pred HHHHHHH-hhccCCcEEEEEec
Q psy12355 12 NCLTLGI-NVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~-~~l~~~G~iv~~g~ 32 (112)
..+..+. +.|+|||+++....
T Consensus 121 ~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 121 ALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEcC
Confidence 4678888 99999999998753
No 413
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=32.35 E-value=34 Score=22.48 Aligned_cols=20 Identities=20% Similarity=0.283 Sum_probs=17.2
Q ss_pred HHHHHHhhccCCcEEEEEec
Q psy12355 13 CLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~ 32 (112)
.+..+.++|+|||+++++-.
T Consensus 265 iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 265 LLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp HHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHhhCCCCCEEEEEEe
Confidence 47888899999999998864
No 414
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=32.30 E-value=61 Score=20.32 Aligned_cols=31 Identities=3% Similarity=-0.089 Sum_probs=19.2
Q ss_pred CcEEEEcccChHHHHHHHh-------hccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGIN-------VTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~-------~l~~~G~iv~~g 31 (112)
+|+|+.|++.+..+...+. .++++..++..+
T Consensus 59 ~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s 96 (295)
T 1yb4_A 59 ADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMS 96 (295)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECC
Confidence 5899999977765555554 344444444443
No 415
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=32.25 E-value=44 Score=22.31 Aligned_cols=22 Identities=32% Similarity=0.424 Sum_probs=16.7
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+++.|+++|.++.....
T Consensus 316 ~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 316 NVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp HHHHHHHTTEEEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCcEEEEEECC
Confidence 3467788899999998877643
No 416
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=32.08 E-value=35 Score=22.48 Aligned_cols=20 Identities=15% Similarity=0.069 Sum_probs=16.8
Q ss_pred HHHHHHhhccCCcEEEEEec
Q psy12355 13 CLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~ 32 (112)
.+..+.+.|+|||+++++-.
T Consensus 269 ~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 269 ILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp HHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHhcCCCcEEEEEee
Confidence 47778899999999998764
No 417
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=31.93 E-value=49 Score=21.24 Aligned_cols=28 Identities=14% Similarity=0.065 Sum_probs=19.6
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLM 28 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv 28 (112)
+|+++++++.......+.++++.|=+.+
T Consensus 65 ~D~viI~tP~~~~~~~~~ea~~~Gi~~i 92 (288)
T 2nu8_A 65 ATASVIYVPAPFCKDSILEAIDAGIKLI 92 (288)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTTCSEE
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEE
Confidence 4788888877776666777777665543
No 418
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=31.66 E-value=67 Score=20.07 Aligned_cols=19 Identities=16% Similarity=0.358 Sum_probs=14.2
Q ss_pred HHHHHhhccCCcEEEEEec
Q psy12355 14 LTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 14 ~~~~~~~l~~~G~iv~~g~ 32 (112)
...++..++++|+++.++.
T Consensus 148 ~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 148 IRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHHCCTTCEEEEECC
T ss_pred HHHHHHHHhcCCEEEEEeC
Confidence 4455667778999999964
No 419
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=31.65 E-value=35 Score=22.52 Aligned_cols=21 Identities=24% Similarity=0.230 Sum_probs=17.4
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|+|||+++++-.
T Consensus 279 ~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 279 TLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp HHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEEEe
Confidence 357788899999999998764
No 420
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=31.50 E-value=28 Score=21.26 Aligned_cols=19 Identities=11% Similarity=0.032 Sum_probs=16.3
Q ss_pred HHHHHHHhhccCCcEEEEE
Q psy12355 12 NCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~ 30 (112)
..+..+.+.|++||++++.
T Consensus 126 ~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 126 DICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEE
Confidence 4678889999999999876
No 421
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=31.45 E-value=33 Score=23.29 Aligned_cols=31 Identities=29% Similarity=0.269 Sum_probs=20.9
Q ss_pred CcEEE-EcccC-hHHHHHHHhhccCCcEEEEEe
Q psy12355 1 MMLYL-DPLGT-ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~-d~~g~-~~~~~~~~~~l~~~G~iv~~g 31 (112)
||+|+ |.-|. ...+..++++++++|.++...
T Consensus 126 fD~V~lDP~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 126 FDYVDLDPFGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEECCCcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 35554 54343 356888999999999766654
No 422
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=31.12 E-value=19 Score=23.44 Aligned_cols=32 Identities=25% Similarity=0.259 Sum_probs=24.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|++|.++|.+..+. -+.+++|..++.+|...
T Consensus 204 ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 204 ADLIIVAAGCVNLLR--SDMVKEGVIVVDVGINR 235 (285)
T ss_dssp CSEEEECSSCTTCBC--GGGSCTTEEEEECCCEE
T ss_pred CCEEEECCCCCCcCC--HHHcCCCeEEEEeccCc
Confidence 699999999876543 36789998899998643
No 423
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=31.12 E-value=29 Score=21.19 Aligned_cols=30 Identities=10% Similarity=0.115 Sum_probs=20.5
Q ss_pred CcEEEE-cccC-hHHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLD-PLGT-ENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d-~~g~-~~~~~~~~~~l~~~G~iv~~ 30 (112)
||+|+- .+.. ...+..+.+.|++||+++..
T Consensus 142 fD~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 142 YDIVTARAVARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEEEEEECCSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccEEEEeccCCHHHHHHHHHHhcCCCCEEEEE
Confidence 466663 3322 24567778999999999877
No 424
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=30.83 E-value=29 Score=21.83 Aligned_cols=20 Identities=30% Similarity=0.393 Sum_probs=17.2
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|+|||.++..-
T Consensus 107 ~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 107 TMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEe
Confidence 56888999999999999764
No 425
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=30.83 E-value=68 Score=20.70 Aligned_cols=31 Identities=10% Similarity=0.062 Sum_probs=19.8
Q ss_pred CcEEEEcccChHHHHHHH------hhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLTLGI------NVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~------~~l~~~G~iv~~g 31 (112)
+|+|+.|++.+..+...+ ..++++..++..+
T Consensus 88 aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~s 124 (320)
T 4dll_A 88 ADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMA 124 (320)
T ss_dssp CSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecC
Confidence 588899987665455444 2456666666655
No 426
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=30.82 E-value=29 Score=21.71 Aligned_cols=21 Identities=29% Similarity=0.240 Sum_probs=17.6
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.++|+|||++++.-.
T Consensus 154 ~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 154 SVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEEe
Confidence 467889999999999988753
No 427
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=30.57 E-value=26 Score=21.07 Aligned_cols=17 Identities=24% Similarity=0.436 Sum_probs=14.4
Q ss_pred HHHHHHhhccCCcEEEE
Q psy12355 13 CLTLGINVTKMGGKLML 29 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~ 29 (112)
.+..+.+.|++||+++.
T Consensus 119 ~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 119 TFDSAARLLTDGGKLLF 135 (243)
T ss_dssp HHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHhcCCCeEEEE
Confidence 56778889999999986
No 428
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=30.50 E-value=52 Score=20.30 Aligned_cols=29 Identities=3% Similarity=0.016 Sum_probs=20.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~ 30 (112)
+|+|+.|++ +......+..++++..++..
T Consensus 61 ~D~Vi~~v~-~~~~~~v~~~l~~~~~vv~~ 89 (259)
T 2ahr_A 61 VDLVILGIK-PQLFETVLKPLHFKQPIISM 89 (259)
T ss_dssp CSEEEECSC-GGGHHHHHTTSCCCSCEEEC
T ss_pred CCEEEEEeC-cHhHHHHHHHhccCCEEEEe
Confidence 589999997 55567777777766555544
No 429
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=30.36 E-value=64 Score=16.94 Aligned_cols=30 Identities=10% Similarity=0.124 Sum_probs=18.7
Q ss_pred eeeeeCcccHHHHHHHHhcCCCCceEEEEee
Q psy12355 79 ITHNFKLEEAVEAFKTASKKADDTIKIMIHC 109 (112)
Q Consensus 79 ~~~~~~l~~~~~a~~~~~~~~~~~~k~v~~~ 109 (112)
.+.-|..+.++|+...|.+.+. .+|+++..
T Consensus 23 ~TGgfg~~~v~ev~~am~~~g~-~gkii~~~ 52 (85)
T 2l48_A 23 QSGAFSPYETPDVMGALTSLKM-TADFILQS 52 (85)
T ss_dssp EECCBCTTTHHHHHHHHHHTTC-CEEEEECT
T ss_pred EecccCHHHHHHHHHHHHHcCc-eEEEEECC
Confidence 3455666777777777766663 36666543
No 430
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=30.35 E-value=28 Score=23.12 Aligned_cols=16 Identities=0% Similarity=0.061 Sum_probs=8.1
Q ss_pred HHHhhccCCcEEEEEe
Q psy12355 16 LGINVTKMGGKLMLVG 31 (112)
Q Consensus 16 ~~~~~l~~~G~iv~~g 31 (112)
.+++.++++|+++.+.
T Consensus 311 ~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 311 ETEKMVQAYPRILYIS 326 (369)
T ss_dssp HHHHHHTTSSEEEEEE
T ss_pred HHHHHHhCCCEEEEEE
Confidence 3444455555555554
No 431
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=30.31 E-value=41 Score=18.40 Aligned_cols=14 Identities=7% Similarity=0.038 Sum_probs=8.1
Q ss_pred ccHHHHHHHHhcCC
Q psy12355 86 EEAVEAFKTASKKA 99 (112)
Q Consensus 86 ~~~~~a~~~~~~~~ 99 (112)
....+|++.+....
T Consensus 112 ~t~~~Al~~~~~~~ 125 (130)
T 2kln_A 112 MTLPTAVQAFRRRH 125 (130)
T ss_dssp SCHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHhhc
Confidence 45667776665543
No 432
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=30.07 E-value=1e+02 Score=19.50 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=16.7
Q ss_pred HHHHHhhccCCcEEEEEecCC
Q psy12355 14 LTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 14 ~~~~~~~l~~~G~iv~~g~~~ 34 (112)
++..-++++.||-++.+|.+.
T Consensus 101 ~~~l~~~V~~GGgLi~~gG~~ 121 (248)
T 3soz_A 101 LQLIADYVAEGGGLLMIGGYL 121 (248)
T ss_dssp HHHHHHHHHTTCEEEEECSTT
T ss_pred HHHHHHHHHhCCEEEEEcCch
Confidence 455667899999999998654
No 433
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=29.99 E-value=77 Score=20.14 Aligned_cols=58 Identities=10% Similarity=0.113 Sum_probs=30.9
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhhhhhcCeeEEeEeccCCCHHHHHHHHHcCCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVNACAKEIDILSCFRYVNDYPDALEMVASGKC 73 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~g~~ 73 (112)
+|+|+ ++|+.-++..+.+.+...+ .-.+|...+...+-. + . ...++.++++.+.+|+.
T Consensus 64 ~D~vi-~~GGDGT~l~a~~~~~~~~-~P~lGI~~Gt~gfla------~------~-~~~~~~~al~~i~~g~~ 121 (292)
T 2an1_A 64 ADLAV-VVGGDGNMLGAARTLARYD-INVIGINRGNLGFLT------D------L-DPDNALQQLSDVLEGRY 121 (292)
T ss_dssp CSEEE-ECSCHHHHHHHHHHHTTSS-CEEEEBCSSSCCSSC------C------B-CTTSHHHHHHHHHTTCE
T ss_pred CCEEE-EEcCcHHHHHHHHHhhcCC-CCEEEEECCCcccCC------c------C-CHHHHHHHHHHHHcCCC
Confidence 36666 4677777777777776554 334554332211100 0 1 13566667777666654
No 434
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=29.89 E-value=43 Score=20.09 Aligned_cols=19 Identities=26% Similarity=0.340 Sum_probs=14.0
Q ss_pred HHHHHhhccCCcEEEEEec
Q psy12355 14 LTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 14 ~~~~~~~l~~~G~iv~~g~ 32 (112)
...+++.++++|+++.++.
T Consensus 99 ~~~~~~~~~~~g~iv~~sS 117 (223)
T 3uce_A 99 AKHGARYLKQGGSITLTSG 117 (223)
T ss_dssp HHHHGGGEEEEEEEEEECC
T ss_pred HHHHHhhccCCeEEEEecc
Confidence 3445667778999999974
No 435
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=29.81 E-value=32 Score=22.71 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=17.9
Q ss_pred HHHHHhhccCCcEEEEEecCCC
Q psy12355 14 LTLGINVTKMGGKLMLVGMGPQ 35 (112)
Q Consensus 14 ~~~~~~~l~~~G~iv~~g~~~~ 35 (112)
+..|++.|+|||.++.-++...
T Consensus 237 l~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 237 TKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp HHHHGGGEEEEEEEEEEECCCC
T ss_pred HHHHHHhcCCCceEEEEEecCC
Confidence 5678999999999998876544
No 436
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=29.70 E-value=47 Score=20.97 Aligned_cols=23 Identities=9% Similarity=0.062 Sum_probs=18.5
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+....+.|++||++++.-...
T Consensus 177 ~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 177 RVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHHHHHSCTTCEEEEEEEBC
T ss_pred HHHHHHHHhCCCCcEEEEEEecC
Confidence 46888999999999999775433
No 437
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=29.69 E-value=28 Score=20.88 Aligned_cols=20 Identities=10% Similarity=0.071 Sum_probs=16.1
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||+++..-
T Consensus 122 ~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 122 AAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp HHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCeEEEEEe
Confidence 35677888999999998763
No 438
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=29.54 E-value=11 Score=24.56 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=24.4
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|++|-++|.+..+. -+.+++|..++.+|...
T Consensus 203 ADIVI~Avg~p~lI~--~~~vk~GavVIDVgi~r 234 (288)
T 1b0a_A 203 ADLLIVAVGKPGFIP--GDWIKEGAIVIDVGINR 234 (288)
T ss_dssp CSEEEECSCCTTCBC--TTTSCTTCEEEECCCEE
T ss_pred CCEEEECCCCcCcCC--HHHcCCCcEEEEccCCc
Confidence 699999999886433 34579999999998643
No 439
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=29.53 E-value=35 Score=22.30 Aligned_cols=23 Identities=13% Similarity=0.404 Sum_probs=18.2
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.+.++++|.++......
T Consensus 272 ~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 272 KFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp GGHHHHHHHEEEEEEEEEEEEES
T ss_pred HHHHHHHHHcCCCCEEEEEEeec
Confidence 46788889999999988876544
No 440
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=29.53 E-value=73 Score=20.16 Aligned_cols=18 Identities=11% Similarity=0.279 Sum_probs=13.3
Q ss_pred HHHHhhccCCcEEEEEec
Q psy12355 15 TLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 15 ~~~~~~l~~~G~iv~~g~ 32 (112)
..++..++++|+|+.++.
T Consensus 152 ~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 152 SKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHGGGCTTCEEEEEEEC
T ss_pred HHHHHHhhcCCEEEEEEe
Confidence 345556677999999974
No 441
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=29.47 E-value=76 Score=20.47 Aligned_cols=34 Identities=6% Similarity=-0.048 Sum_probs=20.8
Q ss_pred CcEEEEcccChH---------------HHHHHHh---hccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTEN---------------CLTLGIN---VTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~---------------~~~~~~~---~l~~~G~iv~~g~~~ 34 (112)
+|+|+.|+|.+. .+....+ -..+.+.++.++.|.
T Consensus 70 aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 70 SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 589999997541 1122222 236889988886543
No 442
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=29.36 E-value=29 Score=21.41 Aligned_cols=20 Identities=20% Similarity=0.295 Sum_probs=16.9
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|+|||++++..
T Consensus 147 ~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 147 RALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp HHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEE
Confidence 46788889999999998765
No 443
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=29.34 E-value=13 Score=24.14 Aligned_cols=32 Identities=19% Similarity=0.374 Sum_probs=24.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|++|-++|.+..+. -+.+++|..++.+|.+.
T Consensus 204 ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~r 235 (281)
T 2c2x_A 204 ADIVVAAVGVAHLLT--ADMVRPGAAVIDVGVSR 235 (281)
T ss_dssp CSEEEECSCCTTCBC--GGGSCTTCEEEECCEEE
T ss_pred CCEEEECCCCCcccC--HHHcCCCcEEEEccCCC
Confidence 699999999886433 34579998888998654
No 444
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=29.31 E-value=48 Score=21.14 Aligned_cols=18 Identities=6% Similarity=-0.055 Sum_probs=14.3
Q ss_pred HHHHHHhhccCCc--EEEEE
Q psy12355 13 CLTLGINVTKMGG--KLMLV 30 (112)
Q Consensus 13 ~~~~~~~~l~~~G--~iv~~ 30 (112)
.+..+.+.|+||| ++++-
T Consensus 173 ~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 173 VLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp HHHHHHHHHHHSTTCEEEEE
T ss_pred HHHHHHHHhccCCCcEEEEE
Confidence 4666778999999 88864
No 445
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=29.12 E-value=36 Score=21.78 Aligned_cols=20 Identities=15% Similarity=0.330 Sum_probs=16.1
Q ss_pred HHHHHHhhccCCcEEEEEec
Q psy12355 13 CLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~ 32 (112)
....++..++++|+|+.++.
T Consensus 141 ~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 141 TVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp HHHHHTTTEEEEEEEEEECC
T ss_pred HHHHHHHHHhhCCeEEEEee
Confidence 45667788899999999974
No 446
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=28.94 E-value=28 Score=20.59 Aligned_cols=20 Identities=15% Similarity=0.288 Sum_probs=16.2
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|++||.+++.-
T Consensus 135 ~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 135 TAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEe
Confidence 34778889999999998753
No 447
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=28.90 E-value=40 Score=19.25 Aligned_cols=17 Identities=0% Similarity=-0.181 Sum_probs=12.5
Q ss_pred HhhccCCcEEEEEecCC
Q psy12355 18 INVTKMGGKLMLVGMGP 34 (112)
Q Consensus 18 ~~~l~~~G~iv~~g~~~ 34 (112)
.+.|+++|.++......
T Consensus 141 ~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 141 RQLLTNEAVIVCETDKT 157 (187)
T ss_dssp TTCEEEEEEEEEEEETT
T ss_pred hcccCCCCEEEEEeCCc
Confidence 56789999988765433
No 448
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=28.84 E-value=63 Score=20.19 Aligned_cols=32 Identities=3% Similarity=-0.186 Sum_probs=20.1
Q ss_pred CcEEEEcccChHH---HHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENC---LTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~---~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|+.|++.... +......++++..++.++.
T Consensus 63 aDvVilavp~~~~~~v~~~l~~~l~~~~iv~~~~~ 97 (281)
T 2g5c_A 63 PDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGS 97 (281)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred CCEEEEcCCHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 5899999975532 2333345677776666653
No 449
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=28.73 E-value=36 Score=22.19 Aligned_cols=32 Identities=3% Similarity=-0.142 Sum_probs=18.8
Q ss_pred CcEEEEcccChH----HH-HHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTEN----CL-TLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~----~~-~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|+.+++... .+ ...+..+++++.++.+|-
T Consensus 197 aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~ar 233 (313)
T 2ekl_A 197 SDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSR 233 (313)
T ss_dssp CSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred CCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence 467777765432 11 345666777777777653
No 450
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=28.64 E-value=34 Score=20.43 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=17.9
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+.+.|+++|+++.....
T Consensus 120 ~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 120 RALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCcEEEEEEeC
Confidence 4678888999999999987543
No 451
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=28.62 E-value=74 Score=17.11 Aligned_cols=8 Identities=13% Similarity=0.634 Sum_probs=3.3
Q ss_pred CCcEEEEE
Q psy12355 23 MGGKLMLV 30 (112)
Q Consensus 23 ~~G~iv~~ 30 (112)
++.+.+.+
T Consensus 44 ~~~~~vil 51 (118)
T 3ny7_A 44 EGKRIVIL 51 (118)
T ss_dssp TTCSEEEE
T ss_pred CCCcEEEE
Confidence 34444444
No 452
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=28.57 E-value=1e+02 Score=20.07 Aligned_cols=21 Identities=19% Similarity=0.411 Sum_probs=16.1
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.+++||+++.+..
T Consensus 298 ~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 298 DFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp HHHHHHHHTSCTTCEEEEEES
T ss_pred HHHHHHHHhcCCCcEEEEEeC
Confidence 345667788999999998853
No 453
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=28.52 E-value=29 Score=21.91 Aligned_cols=23 Identities=17% Similarity=0.062 Sum_probs=17.8
Q ss_pred HHHHHHHhhccCCcEEEEEecCC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
..+..+.+.|+|||++++.-...
T Consensus 171 ~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 171 GLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHcCCCcEEEEEeecC
Confidence 45778889999999998765433
No 454
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=28.40 E-value=28 Score=22.04 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=17.6
Q ss_pred hHHHHHHHhhccCCcEEEEEe
Q psy12355 11 ENCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g 31 (112)
++.+....+.+++||+++.+.
T Consensus 193 ~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 193 QNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHcCCCcEEEEEe
Confidence 346888999999999999765
No 455
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=28.32 E-value=41 Score=21.18 Aligned_cols=22 Identities=14% Similarity=0.064 Sum_probs=16.9
Q ss_pred hHHHHHHHhhccCCcEEEEEec
Q psy12355 11 ENCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~~g~ 32 (112)
...+..+++.|+++|.++....
T Consensus 199 ~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 199 HKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp GGGHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEEc
Confidence 4567888889999998886654
No 456
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=28.21 E-value=46 Score=21.71 Aligned_cols=21 Identities=19% Similarity=0.461 Sum_probs=17.2
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.++|+|||+++++-.
T Consensus 276 ~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 276 IMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp HHHHHHHTTCCTTCEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEec
Confidence 357788899999999988764
No 457
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=28.13 E-value=43 Score=21.52 Aligned_cols=21 Identities=10% Similarity=0.213 Sum_probs=16.2
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+++++++||.+...+.
T Consensus 206 ~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 206 EFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp GGHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEee
Confidence 457788899999998776653
No 458
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=28.00 E-value=35 Score=21.06 Aligned_cols=20 Identities=15% Similarity=0.002 Sum_probs=16.2
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.++|++||+++...
T Consensus 133 ~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 133 KAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEe
Confidence 35677888999999998764
No 459
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=27.79 E-value=1.1e+02 Score=18.76 Aligned_cols=33 Identities=9% Similarity=0.021 Sum_probs=19.2
Q ss_pred CcEEEEc-----ccChHHHHHHHhhccC-CcEEEEEecC
Q psy12355 1 MMLYLDP-----LGTENCLTLGINVTKM-GGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~-----~g~~~~~~~~~~~l~~-~G~iv~~g~~ 33 (112)
||+|+-. .+.+..+...++.+.+ ||+++..-..
T Consensus 123 fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 123 FDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp CSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred EEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 5677632 2233445555565555 9999887543
No 460
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=27.47 E-value=78 Score=20.05 Aligned_cols=17 Identities=6% Similarity=-0.060 Sum_probs=13.3
Q ss_pred HHHHHHhhccCCcEEEEE
Q psy12355 13 CLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~ 30 (112)
.+....+++ |||+++.-
T Consensus 131 ~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 131 ACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp HHHHHHHHH-TTSEEEEE
T ss_pred HHHHHHHhC-cCcEEEEE
Confidence 566777788 99998854
No 461
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=27.28 E-value=49 Score=20.65 Aligned_cols=18 Identities=28% Similarity=0.303 Sum_probs=14.2
Q ss_pred HHHHHHhhccCCcEEEEE
Q psy12355 13 CLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~ 30 (112)
.+..+.+.|++||+++..
T Consensus 220 ~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 220 IIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp HHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEE
Confidence 456778889999998875
No 462
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=27.01 E-value=93 Score=17.72 Aligned_cols=19 Identities=16% Similarity=0.165 Sum_probs=14.0
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+...++.+ ++|+++...
T Consensus 105 ~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 105 EVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp HHHHHHHHHC-CSSEEEEEE
T ss_pred HHHHHHHhhC-CCCEEEEEE
Confidence 3466777777 999988765
No 463
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=26.73 E-value=84 Score=20.88 Aligned_cols=24 Identities=0% Similarity=0.030 Sum_probs=16.0
Q ss_pred CcEEEEcccChHHHHHHHhhccCC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMG 24 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~ 24 (112)
+|+++++++.+.+....++.+...
T Consensus 80 ~DlaVi~vp~~~a~~ai~ea~~~~ 103 (334)
T 3mwd_B 80 VDVLINFASLRSAYDSTMETMNYA 103 (334)
T ss_dssp CCEEEECCCTTTHHHHHHHHTTST
T ss_pred CcEEEEecCHHHHHHHHHHHHHHC
Confidence 477788776666556667777633
No 464
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=26.51 E-value=76 Score=21.58 Aligned_cols=69 Identities=17% Similarity=0.133 Sum_probs=39.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChh---hh----hhcCeeEEeEe--ccCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLV---NA----CAKEIDILSCF--RYVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~---~~----~~~~~~l~g~~--~~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+.++++.| +-|.+ .+++..+.. .+ -.++..+.-.. .+...+..+.+++.+|
T Consensus 92 vD~V~i~tp~~~h~~~~~~al~aG-khV~~---EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~G 167 (444)
T 2ixa_A 92 IDAVFVSSPWEWHHEHGVAAMKAG-KIVGM---EVSGAITLEECWDYVKVSEQTGVPLMALENVCYRRDVMAILNMVRKG 167 (444)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTT-CEEEE---CCCCCSSHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHHHTT
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCC-CeEEE---eCCCcCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHHcC
Confidence 589999998877777788888765 44444 233333322 11 12333332222 2335567778888887
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 168 ~i 169 (444)
T 2ixa_A 168 MF 169 (444)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 465
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=26.38 E-value=68 Score=21.07 Aligned_cols=69 Identities=9% Similarity=0.041 Sum_probs=41.2
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCeeEEeEe--ccCCCHHHHHHHHHcC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEIDILSCF--RYVNDYPDALEMVASG 71 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~l~g~~--~~~~~~~~~~~~~~~g 71 (112)
+|+|+.|++.......+..+++.| +-|++ .+++..+..+ + -.++..+.-.. .+...++.+-+++.+|
T Consensus 69 vD~V~i~tp~~~H~~~~~~al~aG-khVl~---EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g 144 (359)
T 3m2t_A 69 LDAVVMAGPPQLHFEMGLLAMSKG-VNVFV---EKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMTQVD 144 (359)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTT-CEEEE---CSCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHCHHHHHHHHHHTSG
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCC-CeEEE---ECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCcHHHHHHHHHHHCC
Confidence 489999998777777777888765 44444 3344443322 1 12344333222 2336677888888887
Q ss_pred CC
Q psy12355 72 KC 73 (112)
Q Consensus 72 ~~ 73 (112)
.+
T Consensus 145 ~i 146 (359)
T 3m2t_A 145 EF 146 (359)
T ss_dssp GG
T ss_pred CC
Confidence 55
No 466
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=26.29 E-value=43 Score=20.92 Aligned_cols=19 Identities=16% Similarity=0.387 Sum_probs=14.2
Q ss_pred HHHHHhhccCCcEEEEEec
Q psy12355 14 LTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 14 ~~~~~~~l~~~G~iv~~g~ 32 (112)
...++..++++|+++.++.
T Consensus 144 ~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 144 LREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHHhhCCeEEEEeC
Confidence 3456667778899999974
No 467
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=26.28 E-value=60 Score=21.35 Aligned_cols=32 Identities=9% Similarity=-0.035 Sum_probs=23.5
Q ss_pred CcEEEEcccChHH----H-HHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENC----L-TLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~----~-~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|+.+++.... + ...++.+++++.++.+|-
T Consensus 198 aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~sr 234 (333)
T 1dxy_A 198 SDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTAR 234 (333)
T ss_dssp CSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred CCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCC
Confidence 5888888875431 2 356788999999988874
No 468
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=26.15 E-value=85 Score=20.40 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=17.2
Q ss_pred HHHHHHHhhccC---CcEEEEEec
Q psy12355 12 NCLTLGINVTKM---GGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~---~G~iv~~g~ 32 (112)
..+..+.++|+| ||++++.-.
T Consensus 266 ~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 266 RILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp HHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEe
Confidence 467888899999 999988753
No 469
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=25.92 E-value=96 Score=19.87 Aligned_cols=12 Identities=17% Similarity=0.268 Sum_probs=9.6
Q ss_pred CcEEEEcccChH
Q psy12355 1 MMLYLDPLGTEN 12 (112)
Q Consensus 1 ~D~v~d~~g~~~ 12 (112)
+|+|+.|++.+.
T Consensus 70 aDvViiav~~~~ 81 (309)
T 1hyh_A 70 ADVVISTLGNIK 81 (309)
T ss_dssp CSEEEECCSCGG
T ss_pred CCEEEEecCCcc
Confidence 589999998754
No 470
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=25.91 E-value=1.1e+02 Score=18.12 Aligned_cols=33 Identities=6% Similarity=-0.048 Sum_probs=20.6
Q ss_pred CcEEEEcccChHH-HHHHHhhccC--CcEEEEEecC
Q psy12355 1 MMLYLDPLGTENC-LTLGINVTKM--GGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~-~~~~~~~l~~--~G~iv~~g~~ 33 (112)
+|++|.+.|.... ....++.++. .|+++.++..
T Consensus 74 ~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~ 109 (221)
T 3r6d_A 74 AEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMA 109 (221)
T ss_dssp CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEeec
Confidence 5899999886321 3444555543 3689988743
No 471
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=25.55 E-value=93 Score=20.14 Aligned_cols=32 Identities=3% Similarity=-0.190 Sum_probs=20.9
Q ss_pred CcEEEEcccChH---HHHHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTEN---CLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~---~~~~~~~~l~~~G~iv~~g~ 32 (112)
+|+||.|++... .+......++++..++.++.
T Consensus 95 aDvVilavp~~~~~~vl~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 95 PDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred CCEEEEeCCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence 589999997543 33444556677777766653
No 472
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=25.53 E-value=34 Score=20.52 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=14.5
Q ss_pred HHHHHHhhccCCcEEEEE
Q psy12355 13 CLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~ 30 (112)
.+..+.+.|+++|+++.-
T Consensus 124 ~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 124 YFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp HHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEE
Confidence 466778899999999863
No 473
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=25.41 E-value=80 Score=20.63 Aligned_cols=34 Identities=9% Similarity=0.025 Sum_probs=22.5
Q ss_pred CcEEEEcccChH------------------HHHHHHhhccCCcEEEEEecCC
Q psy12355 1 MMLYLDPLGTEN------------------CLTLGINVTKMGGKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~~------------------~~~~~~~~l~~~G~iv~~g~~~ 34 (112)
+|+|+.++|.+. .+...+.-.+|.+.++.++.|-
T Consensus 79 aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 79 SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 589999987541 1222333447899999998654
No 474
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=25.37 E-value=91 Score=20.14 Aligned_cols=26 Identities=4% Similarity=-0.138 Sum_probs=18.3
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGK 26 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~ 26 (112)
+|+++++++...+.....++++.|=+
T Consensus 72 ~DvaIi~vp~~~~~~~v~ea~~~Gi~ 97 (297)
T 2yv2_A 72 INTSIVFVPAPFAPDAVYEAVDAGIR 97 (297)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTTCS
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCC
Confidence 47888888776666666667766655
No 475
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=25.28 E-value=56 Score=19.31 Aligned_cols=19 Identities=5% Similarity=-0.052 Sum_probs=14.8
Q ss_pred HHHHHHHhhccCCcEEEEE
Q psy12355 12 NCLTLGINVTKMGGKLMLV 30 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~ 30 (112)
..+..+.+.|++||.++..
T Consensus 122 ~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 122 AFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp HHHHHHHTTTCCSEEEEEE
T ss_pred HHHHHHHHhhCCCEEEEEc
Confidence 4577788999999976655
No 476
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=25.19 E-value=50 Score=21.74 Aligned_cols=20 Identities=15% Similarity=0.149 Sum_probs=17.1
Q ss_pred HHHHHHhhccCCcEEEEEec
Q psy12355 13 CLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 13 ~~~~~~~~l~~~G~iv~~g~ 32 (112)
.+..+.++|+|||++++.-.
T Consensus 289 ~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 289 ILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp HHHHHHTTCCTTCEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEe
Confidence 67888899999999998753
No 477
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=25.13 E-value=38 Score=20.61 Aligned_cols=18 Identities=17% Similarity=0.220 Sum_probs=14.5
Q ss_pred HHHHHHHhhccCCcEEEE
Q psy12355 12 NCLTLGINVTKMGGKLML 29 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~ 29 (112)
..+..+.+.|+|||.++.
T Consensus 126 ~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 126 KLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp HHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEE
Confidence 356777889999999875
No 478
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=25.03 E-value=96 Score=19.94 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=17.7
Q ss_pred CcEEEEcccChHH------------------HHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENC------------------LTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~------------------~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+|+.++|.+.. +...+.-.++.+.++.+..+
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP 118 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNP 118 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSS
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence 5899999865431 11222333688888876543
No 479
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=24.92 E-value=38 Score=23.84 Aligned_cols=33 Identities=6% Similarity=0.121 Sum_probs=25.6
Q ss_pred CcEEEEcccChHHH-HHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCL-TLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~-~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+|+-+++....+ ...++.++++..++.+|-.
T Consensus 333 aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 333 ADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp CSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred CCEEEECCCcccccCHHHHhhCCCCcEEEEcCCC
Confidence 58899888665544 4578899999999999853
No 480
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=24.91 E-value=75 Score=21.21 Aligned_cols=22 Identities=23% Similarity=0.344 Sum_probs=15.8
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+++.|+++|.++....+
T Consensus 320 ~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 320 DINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp HHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCcEEEEEeCC
Confidence 3466688888988888776543
No 481
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=24.90 E-value=41 Score=22.35 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=17.5
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.++|+|||+++....
T Consensus 184 ~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 184 ALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEEe
Confidence 467889999999999988643
No 482
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=24.70 E-value=67 Score=20.72 Aligned_cols=26 Identities=4% Similarity=-0.204 Sum_probs=17.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcE
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGK 26 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~ 26 (112)
+|+++++++...+...+.++++.|=+
T Consensus 71 ~Dv~ii~vp~~~~~~~v~ea~~~Gi~ 96 (294)
T 2yv1_A 71 ANASVIFVPAPFAKDAVFEAIDAGIE 96 (294)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHTTCS
T ss_pred CCEEEEccCHHHHHHHHHHHHHCCCC
Confidence 47888888766666666666666655
No 483
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=24.49 E-value=1e+02 Score=19.55 Aligned_cols=31 Identities=10% Similarity=-0.084 Sum_probs=19.5
Q ss_pred CcEEEEcccChHHHH----HHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTENCLT----LGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~----~~~~~l~~~G~iv~~g 31 (112)
+|+|+.|++.+..+. .....++++..++..+
T Consensus 71 aDvvi~~vp~~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 71 ADLIHITVLDDAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp SSEEEECCSSHHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 589999998664333 3444556666665554
No 484
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=24.41 E-value=49 Score=19.58 Aligned_cols=21 Identities=5% Similarity=-0.159 Sum_probs=13.6
Q ss_pred HHHHHHh--hccCCcEEEEEecC
Q psy12355 13 CLTLGIN--VTKMGGKLMLVGMG 33 (112)
Q Consensus 13 ~~~~~~~--~l~~~G~iv~~g~~ 33 (112)
.+....+ +|+++|+++.....
T Consensus 140 ~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 140 TINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp HHHHHHHTTCEEEEEEEEEEEEG
T ss_pred HHHHHHhcCccCCCcEEEEEECC
Confidence 3444443 49999999876543
No 485
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=24.41 E-value=39 Score=19.41 Aligned_cols=19 Identities=16% Similarity=0.200 Sum_probs=16.5
Q ss_pred hHHHHHHHhhccCCcEEEE
Q psy12355 11 ENCLTLGINVTKMGGKLML 29 (112)
Q Consensus 11 ~~~~~~~~~~l~~~G~iv~ 29 (112)
...+.+...+|+++|++..
T Consensus 78 r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 78 KKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp HHHHHHHHTTCCTTCCEEC
T ss_pred HHHHHHHHHHhCCCCEEEe
Confidence 4578999999999999876
No 486
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=23.89 E-value=45 Score=21.64 Aligned_cols=21 Identities=24% Similarity=0.490 Sum_probs=17.5
Q ss_pred HHHHHHHhhccCCcEEEEEec
Q psy12355 12 NCLTLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~ 32 (112)
..+..+.+.|+|||++++.-.
T Consensus 268 ~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 268 EVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEEe
Confidence 457778899999999998864
No 487
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=23.75 E-value=1.1e+02 Score=18.03 Aligned_cols=25 Identities=8% Similarity=0.102 Sum_probs=15.6
Q ss_pred eCcccHHHHHHHHhcCCCCceEEEE
Q psy12355 83 FKLEEAVEAFKTASKKADDTIKIMI 107 (112)
Q Consensus 83 ~~l~~~~~a~~~~~~~~~~~~k~v~ 107 (112)
...+|+.+++..+...+...++..-
T Consensus 192 i~~~Dva~ai~~~l~~~~~~g~~~~ 216 (227)
T 3dhn_A 192 ISVEDYAAAMIDELEHPKHHQERFT 216 (227)
T ss_dssp EEHHHHHHHHHHHHHSCCCCSEEEE
T ss_pred EeHHHHHHHHHHHHhCccccCcEEE
Confidence 4678888888876555433355443
No 488
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=23.67 E-value=61 Score=20.95 Aligned_cols=31 Identities=6% Similarity=-0.025 Sum_probs=18.8
Q ss_pred CcEEEEcccCh-HH---H-HHHHhhccCCcEEEEEe
Q psy12355 1 MMLYLDPLGTE-NC---L-TLGINVTKMGGKLMLVG 31 (112)
Q Consensus 1 ~D~v~d~~g~~-~~---~-~~~~~~l~~~G~iv~~g 31 (112)
+|+|+-+++.. .+ + ...++.++++..++.+|
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 209 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVA 209 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECS
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEee
Confidence 46777776632 21 1 34567777777777775
No 489
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=23.43 E-value=97 Score=20.15 Aligned_cols=69 Identities=20% Similarity=0.178 Sum_probs=43.7
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h---hh----cCeeEEeEec--cCCCHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A---CA----KEIDILSCFR--YVNDYPDALEMV 68 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~---~~----~~~~l~g~~~--~~~~~~~~~~~~ 68 (112)
+|+|+.|++.......+..+|+.| +-|++ .+++..+..+ + .. ++..+.-.+. +...++++-+++
T Consensus 76 iDaV~I~tP~~~H~~~~~~al~aG-khVl~---EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~i 151 (390)
T 4h3v_A 76 VQLVDVCTPGDSHAEIAIAALEAG-KHVLC---EKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKLV 151 (390)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTT-CEEEE---ESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHH
T ss_pred CCEEEEeCChHHHHHHHHHHHHcC-CCcee---ecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHHH
Confidence 589999998887778888888766 44444 3344444322 2 21 2444433333 346788889999
Q ss_pred HcCCC
Q psy12355 69 ASGKC 73 (112)
Q Consensus 69 ~~g~~ 73 (112)
.+|.+
T Consensus 152 ~~g~i 156 (390)
T 4h3v_A 152 ADGKI 156 (390)
T ss_dssp HTTSS
T ss_pred HcCCC
Confidence 99876
No 490
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=23.37 E-value=85 Score=20.30 Aligned_cols=69 Identities=10% Similarity=0.070 Sum_probs=41.8
Q ss_pred CcEEEEcccChHHHHHHHhhccCCcEEEEEecCCCccccChhh---h----hhcCee--EEeEe--ccCCCHHHHHHHHH
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKMGGKLMLVGMGPQMVSVPLVN---A----CAKEID--ILSCF--RYVNDYPDALEMVA 69 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~----~~~~~~--l~g~~--~~~~~~~~~~~~~~ 69 (112)
+|+|+.|++.......+.++++.|=. |++ .+++..+..+ + -.++.. +.-.. .+...++++-+++.
T Consensus 68 vD~V~I~tp~~~H~~~~~~al~aGkh-Vl~---EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~i~ 143 (337)
T 3ip3_A 68 PDILVINTVFSLNGKILLEALERKIH-AFV---EKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLVS 143 (337)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHTTCE-EEE---CSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHHHH
T ss_pred CCEEEEeCCcchHHHHHHHHHHCCCc-EEE---eCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHHHh
Confidence 58999999877767778888877644 444 4444444322 2 123333 22222 23467888888888
Q ss_pred cCCC
Q psy12355 70 SGKC 73 (112)
Q Consensus 70 ~g~~ 73 (112)
+|.+
T Consensus 144 ~g~i 147 (337)
T 3ip3_A 144 EGAV 147 (337)
T ss_dssp HTTT
T ss_pred cCCc
Confidence 8876
No 491
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=23.05 E-value=1.2e+02 Score=18.17 Aligned_cols=16 Identities=19% Similarity=-0.004 Sum_probs=11.4
Q ss_pred eCcccHHHHHHHHhcC
Q psy12355 83 FKLEEAVEAFKTASKK 98 (112)
Q Consensus 83 ~~l~~~~~a~~~~~~~ 98 (112)
...+|+.+++..+.+.
T Consensus 215 ~~~~dva~~~~~l~~~ 230 (255)
T 2dkn_A 215 SEPREVAEAIAFLLGP 230 (255)
T ss_dssp BCHHHHHHHHHHHHSG
T ss_pred CCHHHHHHHHHHHhCC
Confidence 4678888888777553
No 492
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=22.96 E-value=57 Score=21.53 Aligned_cols=32 Identities=9% Similarity=-0.119 Sum_probs=20.9
Q ss_pred CcEEEEcccChH----HH-HHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTEN----CL-TLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~----~~-~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|+.+++... .+ ...++.+++++.++.+|-
T Consensus 220 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ar 256 (335)
T 2g76_A 220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCAR 256 (335)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred CCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 477777776542 12 346777888888887764
No 493
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=22.95 E-value=57 Score=20.22 Aligned_cols=17 Identities=0% Similarity=-0.212 Sum_probs=13.0
Q ss_pred eCcccHHHHHHHHhcCC
Q psy12355 83 FKLEEAVEAFKTASKKA 99 (112)
Q Consensus 83 ~~l~~~~~a~~~~~~~~ 99 (112)
...+|+.++...+.+..
T Consensus 233 ~~p~dvA~~v~~L~s~~ 249 (269)
T 2h7i_A 233 KDATPVAKTVCALLSDW 249 (269)
T ss_dssp TCCHHHHHHHHHHHSSS
T ss_pred CCHHHHHHHHHHHhCch
Confidence 35688999998887654
No 494
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=22.94 E-value=75 Score=20.83 Aligned_cols=32 Identities=9% Similarity=-0.094 Sum_probs=21.9
Q ss_pred CcEEEEcccChHH----H-HHHHhhccCCcEEEEEec
Q psy12355 1 MMLYLDPLGTENC----L-TLGINVTKMGGKLMLVGM 32 (112)
Q Consensus 1 ~D~v~d~~g~~~~----~-~~~~~~l~~~G~iv~~g~ 32 (112)
+|+|+.+++.... + ...++.+++++.++.+|-
T Consensus 200 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~ar 236 (333)
T 1j4a_A 200 ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSR 236 (333)
T ss_dssp CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred CCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCC
Confidence 4788888765431 1 346678888888888864
No 495
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=22.77 E-value=45 Score=21.94 Aligned_cols=20 Identities=20% Similarity=0.262 Sum_probs=17.0
Q ss_pred HHHHHHHhhccCCcEEEEEe
Q psy12355 12 NCLTLGINVTKMGGKLMLVG 31 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g 31 (112)
..+..+.+.|+|||++++.-
T Consensus 287 ~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 287 EFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEE
Confidence 46788899999999999874
No 496
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=22.39 E-value=47 Score=23.29 Aligned_cols=33 Identities=9% Similarity=0.001 Sum_probs=25.3
Q ss_pred CcEEEEcccChHHH-HHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPLGTENCL-TLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~g~~~~~-~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+|+-+++....+ ...++.+++++.++.+|-.
T Consensus 313 aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 313 GDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp CSEEEECCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred CCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence 58888887665544 3577889999999999853
No 497
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=22.24 E-value=1.2e+02 Score=18.73 Aligned_cols=33 Identities=15% Similarity=0.070 Sum_probs=22.4
Q ss_pred CcEEEEcc-cCh---HHHHHHHhhccCCcEEEEEecC
Q psy12355 1 MMLYLDPL-GTE---NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 1 ~D~v~d~~-g~~---~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
+|+|+.+- |+. ..+..+.+.++++|+++.-+..
T Consensus 85 ~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~~ 121 (225)
T 3kr9_A 85 VSVITIAGMGGRLIARILEEGLGKLANVERLILQPNN 121 (225)
T ss_dssp CCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEESS
T ss_pred CCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 57676543 332 3466677789999999988763
No 498
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=21.89 E-value=1.3e+02 Score=18.55 Aligned_cols=34 Identities=9% Similarity=-0.017 Sum_probs=21.4
Q ss_pred CcEEEEcccCh-------HHHHHHHhhccCC--cEEEEEecCC
Q psy12355 1 MMLYLDPLGTE-------NCLTLGINVTKMG--GKLMLVGMGP 34 (112)
Q Consensus 1 ~D~v~d~~g~~-------~~~~~~~~~l~~~--G~iv~~g~~~ 34 (112)
+|+||.++|.. ......++.++.. ++++.++...
T Consensus 66 ~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 66 MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 58999988752 2234455555544 4899888644
No 499
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=21.85 E-value=62 Score=20.33 Aligned_cols=22 Identities=9% Similarity=0.061 Sum_probs=13.7
Q ss_pred CcEEEEcccChHHHHHHHhhccC
Q psy12355 1 MMLYLDPLGTENCLTLGINVTKM 23 (112)
Q Consensus 1 ~D~v~d~~g~~~~~~~~~~~l~~ 23 (112)
+|+|+ ++|+.-++..+.+.+..
T Consensus 42 ~D~vv-~~GGDGTll~~a~~~~~ 63 (258)
T 1yt5_A 42 ADLIV-VVGGDGTVLKAAKKAAD 63 (258)
T ss_dssp CSEEE-EEECHHHHHHHHTTBCT
T ss_pred CCEEE-EEeCcHHHHHHHHHhCC
Confidence 35555 45666667777776665
No 500
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=21.76 E-value=52 Score=21.04 Aligned_cols=22 Identities=14% Similarity=0.111 Sum_probs=17.8
Q ss_pred HHHHHHHhhccCCcEEEEEecC
Q psy12355 12 NCLTLGINVTKMGGKLMLVGMG 33 (112)
Q Consensus 12 ~~~~~~~~~l~~~G~iv~~g~~ 33 (112)
..+..+.+.|++||+++++-..
T Consensus 252 ~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 252 QLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp HHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHhCCCCcEEEEEeec
Confidence 4577788999999999988643
Done!