BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12362
(92 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZHV2|NAA35_CHICK N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Gallus
gallus GN=NAA35 PE=2 SV=1
Length = 725
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Query: 10 VRSFIAPPFLHSLYWPSPRAGF--TAQGREAVESFLNHCVRPFAGLIQMCGHNRARQRDR 67
+RSF++PP L SP+ Q ++ ++SF+ HCVRPF LIQ+ GHNRARQRD+
Sbjct: 396 LRSFVSPPVL------SPKCCLYNNHQAKDYIDSFVTHCVRPFCSLIQIHGHNRARQRDK 449
Query: 68 LSHLLEEFAALQDEKSKIRAG 88
L H+LEEFA LQDE K+ A
Sbjct: 450 LGHILEEFATLQDEAEKVDAA 470
>sp|Q5RBT3|NAA35_PONAB N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Pongo
abelii GN=NAA35 PE=2 SV=1
Length = 725
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Query: 10 VRSFIAPPFLHSLYWPSPRAGF--TAQGREAVESFLNHCVRPFAGLIQMCGHNRARQRDR 67
+RSF++PP L SP+ Q ++ ++SF+ HCVRPF LIQ+ GHNRARQRD+
Sbjct: 396 LRSFVSPPVL------SPKCYLYNNHQAKDCIDSFVTHCVRPFCSLIQIHGHNRARQRDK 449
Query: 68 LSHLLEEFAALQDEKSKIRAG 88
L H+LEEFA LQDE K+ A
Sbjct: 450 LGHILEEFATLQDEAEKVDAA 470
>sp|Q4R708|NAA35_MACFA N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Macaca
fascicularis GN=NAA35 PE=2 SV=1
Length = 725
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Query: 10 VRSFIAPPFLHSLYWPSPRAGF--TAQGREAVESFLNHCVRPFAGLIQMCGHNRARQRDR 67
+RSF++PP L SP+ Q ++ ++SF+ HCVRPF LIQ+ GHNRARQRD+
Sbjct: 396 LRSFVSPPVL------SPKCYLYNNHQAKDCIDSFVTHCVRPFCSLIQIHGHNRARQRDK 449
Query: 68 LSHLLEEFAALQDEKSKIRAG 88
L H+LEEFA LQDE K+ A
Sbjct: 450 LGHILEEFATLQDEAEKVDAA 470
>sp|Q5VZE5|NAA35_HUMAN N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Homo
sapiens GN=NAA35 PE=1 SV=1
Length = 725
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Query: 10 VRSFIAPPFLHSLYWPSPRAGF--TAQGREAVESFLNHCVRPFAGLIQMCGHNRARQRDR 67
+RSF++PP L SP+ Q ++ ++SF+ HCVRPF LIQ+ GHNRARQRD+
Sbjct: 396 LRSFVSPPVL------SPKCYLYNNHQAKDCIDSFVTHCVRPFCSLIQIHGHNRARQRDK 449
Query: 68 LSHLLEEFAALQDEKSKIRAG 88
L H+LEEFA LQDE K+ A
Sbjct: 450 LGHILEEFATLQDEAEKVDAA 470
>sp|Q6PHQ8|NAA35_MOUSE N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Mus
musculus GN=Naa35 PE=1 SV=1
Length = 725
Score = 89.7 bits (221), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Query: 10 VRSFIAPPFLHSLYWPSPRAGF--TAQGREAVESFLNHCVRPFAGLIQMCGHNRARQRDR 67
+RSF++PP L SP+ Q ++ ++SF+ HCVRPF L+Q+ GHNRARQRD+
Sbjct: 396 LRSFVSPPVL------SPKCCLYNNHQAKDCIDSFVTHCVRPFCSLVQIHGHNRARQRDK 449
Query: 68 LSHLLEEFAALQDEKSKIRAG 88
L H+LEEFA LQDE K+ A
Sbjct: 450 LGHILEEFATLQDEAEKVDAA 470
>sp|Q6DKG0|NAA35_RAT N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Rattus
norvegicus GN=Naa35 PE=2 SV=1
Length = 725
Score = 89.7 bits (221), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Query: 10 VRSFIAPPFLHSLYWPSPRAGF--TAQGREAVESFLNHCVRPFAGLIQMCGHNRARQRDR 67
+RSF++PP L SP+ Q ++ ++SF+ HCVRPF L+Q+ GHNRARQRD+
Sbjct: 396 LRSFVSPPVL------SPKCCLYNNHQAKDCIDSFVTHCVRPFCSLVQIHGHNRARQRDK 449
Query: 68 LSHLLEEFAALQDEKSKIRAG 88
L H+LEEFA LQDE K+ A
Sbjct: 450 LGHILEEFATLQDEAEKVDAA 470
>sp|Q7T322|NAA35_DANRE N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Danio rerio
GN=naa35 PE=1 SV=1
Length = 724
Score = 85.5 bits (210), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 10 VRSFIAPPFLHSLYWPSPRAGFTAQGREAVESFLNHCVRPFAGLIQMCGHNRARQRDRLS 69
+R F++PP L S Q ++ ++SF+ HC RPF LIQ+ GHNRARQRD+L
Sbjct: 395 LRCFVSPPVLSS----KCSLNNNHQAKDYIDSFVTHCTRPFCSLIQIHGHNRARQRDKLG 450
Query: 70 HLLEEFAALQDEKSKIRAG 88
H+LEEFA LQDE K+ A
Sbjct: 451 HILEEFATLQDEAEKVDAA 469
>sp|Q9W1A2|NAA35_DROME N-alpha-acetyltransferase, 35 NatC auxiliary subunit homolog
OS=Drosophila melanogaster GN=CG4065 PE=2 SV=1
Length = 784
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 10 VRSFIAPPFLHSLYWPSPRAGFTAQGREAVESFLNHCVR--PFAGLIQMCGHNRARQRDR 67
V+ F +PP L++ + P A + ++ +E+F +C+ F I++CG NRARQRD+
Sbjct: 437 VQVFNSPPVLNAKH---PVAA-DPKVQQHLENFFRYCINMNTFTQFIRICGFNRARQRDK 492
Query: 68 LSHLLEEFAALQDEKSKIRAGNSEI 92
L+ L+E F +Q + +++ + +++
Sbjct: 493 LARLIENFDTIQVDAARLDSMMNQL 517
>sp|Q9USY3|NAA35_SCHPO N-alpha-acetyltransferase, 35 NatC auxiliary subunit
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak10 PE=3 SV=1
Length = 708
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 39 VESFLNHCVRPFAGLIQMCGHNRARQRDRLSHLLEE 74
VES + H L+++C HN R R L +LL E
Sbjct: 420 VESLIAHSTNIMVDLVRICSHNPCRFRRNLINLLPE 455
>sp|Q089M3|CCMA_SHEFN Cytochrome c biogenesis ATP-binding export protein CcmA
OS=Shewanella frigidimarina (strain NCIMB 400) GN=ccmA
PE=3 SV=1
Length = 216
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 48 RPFAGLIQMCGHNRARQRDRLSHLLEEFAALQDEKSKIRA 87
RP+AG ++ G N R RD +H L L KS++ A
Sbjct: 61 RPYAGEVEYSGENINRCRDEFNHDLLYLGHLAGVKSELTA 100
>sp|B9JQX0|TRUA_AGRVS tRNA pseudouridine synthase A OS=Agrobacterium vitis (strain S4 /
ATCC BAA-846) GN=truA PE=3 SV=1
Length = 259
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 28 RAGFTAQGREAVESFLNHCVRPFAGLIQMCGHNRARQRD 66
R G + R + +SFL++ +R FAG ++M G + D
Sbjct: 180 RNGDLIEIRASAQSFLHNQIRSFAGTLKMAGEGKMTPED 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,520,455
Number of Sequences: 539616
Number of extensions: 1046032
Number of successful extensions: 3551
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3538
Number of HSP's gapped (non-prelim): 13
length of query: 92
length of database: 191,569,459
effective HSP length: 62
effective length of query: 30
effective length of database: 158,113,267
effective search space: 4743398010
effective search space used: 4743398010
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)