BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12375
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0KHY3|Y1004_DROME Extracellular domains-containing protein CG31004 OS=Drosophila
melanogaster GN=CG31004 PE=1 SV=1
Length = 1431
Score = 188 bits (477), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 107/146 (73%), Gaps = 3/146 (2%)
Query: 71 NYGPTSNRYAPATFRSGGLYNDYYVISEGRLREIRAEFLYWFFDRGGDDNEGDYQKDIHN 130
N+ P +N P T+ + Y I+ RL E+R+ F+YW+FD+ GDYQ DIH
Sbjct: 131 NWDPNNNVAPPTTYSTAA---GGYTITAARLAELRSNFMYWYFDKDMYGGRGDYQFDIHA 187
Query: 131 SSPQIHKNFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFI 190
S Q+HKN NFQLPF+GFRFNYTR+S +GYLEFSDPP++ TYPL FP KDWP K DPSF+
Sbjct: 188 SMTQLHKNLNFQLPFYGFRFNYTRLSLNGYLEFSDPPEYLTYPLVFPIKDWPAKRDPSFM 247
Query: 191 GIFYSKCRIGSIRTTDIDQRTPGVYF 216
GIF+SKCR+G I +DIDQRTPGVYF
Sbjct: 248 GIFFSKCRVGRIYPSDIDQRTPGVYF 273
>sp|P34501|YMS5_CAEEL Uncharacterized protein K03H1.5 OS=Caenorhabditis elegans
GN=K03H1.5 PE=1 SV=2
Length = 1385
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 92 DYYVISEGRLREIRAEFLYWFFDRGGDDNEGDYQKDIHNSSPQIHKNFNFQLPFFGFRFN 151
DY V E EI F W D+ + + + + N F PFFGFRFN
Sbjct: 107 DYDVRIEEGWTEILYPFGTWAMDK----------QLMGQAGRETQTNLGFDCPFFGFRFN 156
Query: 152 YTRVSRHGYLEFSDPPDHFTYPLSFPNKDWPKKNDPSFIGIFYSKCRIGSIRTTDI 207
YT V G L F PP P +FPN WPK+ D SF+ FY+ I T I
Sbjct: 157 YTMVYPMGMLSFGLPP-FSAPPWTFPNPAWPKQRDHSFVAAFYADAMFQWIGNTKI 211
>sp|Q21874|YF1M_CAEEL Uncharacterized protein R09E10.5 OS=Caenorhabditis elegans
GN=R09E10.5 PE=1 SV=1
Length = 1459
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 144 PFFGFRFNYTRVSRHGYLEFSDPPDHF-TYPLSFPNKDWPKKNDPSFIGIFYSKCRI 199
P++G +NYT +S +GYL F+ D T + DWP++ DP+ I + K ++
Sbjct: 118 PYYGGLYNYTTISVNGYLGFATVLDQGPTINVGPETTDWPRQEDPAMIAPYLCKQQV 174
>sp|Q20762|YAO6_CAEEL Uncharacterized protein F54D1.6 OS=Caenorhabditis elegans
GN=F54D1.6 PE=1 SV=4
Length = 1423
Score = 37.7 bits (86), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 138 NFNFQLPFFGFRFNYTRVSRHGYLEFSDPPDHF-TYPLSFPNKDWPKKNDPSFIGIFYSK 196
+ + PF+G +NY+ +S +GY+ F+ D T + DWP+ DP+ I + K
Sbjct: 81 DLHMYFPFYGGLYNYSTLSVNGYIGFATVLDQGPTLNVGPDMTDWPRHEDPAMIAPYLCK 140
Query: 197 CRI 199
+I
Sbjct: 141 QQI 143
>sp|Q62768|UN13A_RAT Protein unc-13 homolog A OS=Rattus norvegicus GN=Unc13a PE=1 SV=1
Length = 1735
Score = 30.8 bits (68), Expect = 6.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 114 DRGGDDNEGDYQKDIHNSSP-----------QIHKNFNFQLPFFGFRFNYTRVSRHGYLE 162
D DD + DY+ + NS P +H+ ++ + P G R +Y+ S H Y E
Sbjct: 190 DSAVDDRDSDYRSETSNSIPPPYYTTSQPNASVHQ-YSVRPPPLGSRESYSD-SMHSYEE 247
Query: 163 FSDP 166
FS+P
Sbjct: 248 FSEP 251
>sp|Q4KUS2|UN13A_MOUSE Protein unc-13 homolog A OS=Mus musculus GN=Unc13a PE=1 SV=3
Length = 1712
Score = 30.8 bits (68), Expect = 6.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 114 DRGGDDNEGDYQKDIHNSSP-----------QIHKNFNFQLPFFGFRFNYTRVSRHGYLE 162
D DD + DY+ + NS P +H+ ++ + P G R +Y+ S H Y E
Sbjct: 190 DSAVDDRDSDYRSETSNSIPPPYYTTSQPNASVHQ-YSVRPPPLGSRESYSD-SMHSYEE 247
Query: 163 FSDP 166
FS+P
Sbjct: 248 FSEP 251
>sp|Q9UPW8|UN13A_HUMAN Protein unc-13 homolog A OS=Homo sapiens GN=UNC13A PE=2 SV=4
Length = 1703
Score = 30.8 bits (68), Expect = 7.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 114 DRGGDDNEGDYQKDIHNSSP-----------QIHKNFNFQLPFFGFRFNYTRVSRHGYLE 162
D DD + DY+ + NS P +H+ ++ + P G R +Y+ S H Y E
Sbjct: 191 DSAVDDRDSDYRSETSNSIPPPYYTTSQPNASVHQ-YSVRPPPLGSRESYSD-SMHSYEE 248
Query: 163 FSDP 166
FS+P
Sbjct: 249 FSEP 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,967,640
Number of Sequences: 539616
Number of extensions: 4372209
Number of successful extensions: 7750
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 7744
Number of HSP's gapped (non-prelim): 14
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)