Query psy12375
Match_columns 216
No_of_seqs 27 out of 29
Neff 2.0
Searched_HMMs 13730
Date Fri Aug 16 17:33:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12375.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/12375hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ivza_ d.58.41.1 (A:) SEA dom 36.8 3.7 0.00027 31.2 0.2 26 189-214 56-81 (132)
2 d1lkja_ a.39.1.5 (A:) Calmodul 31.7 10 0.00075 24.9 1.8 23 94-118 2-24 (146)
3 d2obha1 a.39.1.5 (A:26-166) Ca 28.6 14 0.0011 23.6 2.1 21 97-119 1-21 (141)
4 d1f54a_ a.39.1.5 (A:) Calmodul 27.7 14 0.001 22.6 1.9 22 95-118 3-24 (77)
5 d2pq3a1 a.39.1.5 (A:3-75) Calm 24.2 16 0.0012 22.3 1.7 22 95-118 1-22 (73)
6 d1wdcb_ a.39.1.5 (B:) Myosin E 21.6 20 0.0015 23.7 1.8 21 96-118 1-21 (142)
7 d1wfha_ g.80.1.1 (A:) Zinc fin 17.2 24 0.0017 23.5 1.4 13 2-14 43-55 (64)
8 d1exra_ a.39.1.5 (A:) Calmodul 15.3 33 0.0024 22.1 1.7 21 96-118 3-23 (146)
9 d2jxca1 a.39.1.6 (A:121-215) E 14.7 35 0.0026 22.1 1.7 18 93-110 1-18 (95)
10 d1wffa_ g.80.1.1 (A:) ANUBL1 ( 13.4 29 0.0021 24.0 1.0 12 2-13 54-65 (85)
No 1
>d1ivza_ d.58.41.1 (A:) SEA domain from the hypothetical protein homologous to mucin 16 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.79 E-value=3.7 Score=31.20 Aligned_cols=26 Identities=23% Similarity=0.538 Sum_probs=22.5
Q ss_pred eeeeeeccccccccccCCCCCCCCcc
Q psy12375 189 FIGIFYSKCRIGSIRTTDIDQRTPGV 214 (216)
Q Consensus 189 fIA~Flsk~rIg~~~~~d~d~r~pGV 214 (216)
=|+++||-||+-.+|+-..++..+||
T Consensus 56 Sig~~ysgCrl~~lRp~~kng~aTgV 81 (132)
T d1ivza_ 56 SIKSYFSDCQVLAFRSVSNNNNHTGV 81 (132)
T ss_dssp TTTTTEEEECCCEEECCSSCSSCCEE
T ss_pred CcCccccccEEEecccccCCCCccee
Confidence 37899999999999996667888887
No 2
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.73 E-value=10 Score=24.95 Aligned_cols=23 Identities=22% Similarity=0.535 Sum_probs=18.9
Q ss_pred eeccHHHHHHHHHhhceeeccCCCC
Q psy12375 94 YVISEGRLREIRAEFLYWFFDRGGD 118 (216)
Q Consensus 94 Y~i~~~rL~eiR~~fMYwf~D~gg~ 118 (216)
+.+|++++++||+-|.- ||+.|+
T Consensus 2 ~~ls~~~i~~l~~~F~~--~D~d~~ 24 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFAL--FDKDNN 24 (146)
T ss_dssp CCCCHHHHHHHHHHHHH--HCCSSS
T ss_pred CCCCHHHHHHHHHHHHH--HCCCCC
Confidence 46899999999999875 677665
No 3
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.62 E-value=14 Score=23.58 Aligned_cols=21 Identities=38% Similarity=0.642 Sum_probs=17.3
Q ss_pred cHHHHHHHHHhhceeeccCCCCC
Q psy12375 97 SEGRLREIRAEFLYWFFDRGGDD 119 (216)
Q Consensus 97 ~~~rL~eiR~~fMYwf~D~gg~~ 119 (216)
|+++.++||+.|+ .||+.|++
T Consensus 1 t~~~~~elk~~F~--~~D~~~~G 21 (141)
T d2obha1 1 TEEQKQEIREAFD--LFDADGTG 21 (141)
T ss_dssp CHHHHHHHHHHHH--TTCTTCCS
T ss_pred CHHHHHHHHHHHH--HHcCCCCC
Confidence 7899999999998 56877763
No 4
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.70 E-value=14 Score=22.65 Aligned_cols=22 Identities=23% Similarity=0.588 Sum_probs=17.6
Q ss_pred eccHHHHHHHHHhhceeeccCCCC
Q psy12375 95 VISEGRLREIRAEFLYWFFDRGGD 118 (216)
Q Consensus 95 ~i~~~rL~eiR~~fMYwf~D~gg~ 118 (216)
.||++++++||+-|-. ||+.|+
T Consensus 3 ~lt~eqi~el~~~F~~--~D~d~~ 24 (77)
T d1f54a_ 3 NLTEEQIAEFKEAFAL--FDKDNN 24 (77)
T ss_dssp CCCHHHHHHHHHHHHH--TCTTCS
T ss_pred CCCHHHHHHHHHHHHH--HcCCCC
Confidence 4899999999987754 677766
No 5
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}
Probab=24.21 E-value=16 Score=22.30 Aligned_cols=22 Identities=32% Similarity=0.747 Sum_probs=17.8
Q ss_pred eccHHHHHHHHHhhceeeccCCCC
Q psy12375 95 VISEGRLREIRAEFLYWFFDRGGD 118 (216)
Q Consensus 95 ~i~~~rL~eiR~~fMYwf~D~gg~ 118 (216)
.||++++++||+-|. .||++|+
T Consensus 1 qLs~eei~el~~~F~--~~D~d~~ 22 (73)
T d2pq3a1 1 QLTEEQIAEFKEAFS--LFDKDGD 22 (73)
T ss_dssp CCCHHHHHHHHHHHH--HTCTTSS
T ss_pred CcCHHHHHHHHHHHH--HHcCCCC
Confidence 389999999999775 4677766
No 6
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=21.60 E-value=20 Score=23.69 Aligned_cols=21 Identities=19% Similarity=0.515 Sum_probs=17.1
Q ss_pred ccHHHHHHHHHhhceeeccCCCC
Q psy12375 96 ISEGRLREIRAEFLYWFFDRGGD 118 (216)
Q Consensus 96 i~~~rL~eiR~~fMYwf~D~gg~ 118 (216)
||++++++||+-|- .||+.++
T Consensus 1 L~~~qi~e~~~~F~--~~D~d~~ 21 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFS--MIDVDRD 21 (142)
T ss_dssp CCHHHHHHHHHHHH--HHCTTCS
T ss_pred CCHHHHHHHHHHHH--HHcCCCC
Confidence 68999999999874 4687775
No 7
>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=17.24 E-value=24 Score=23.52 Aligned_cols=13 Identities=46% Similarity=0.956 Sum_probs=10.9
Q ss_pred CCCCCcCCCCCcc
Q psy12375 2 RIPADHQCDHDFD 14 (216)
Q Consensus 2 ~~~~~~~~~~~~~ 14 (216)
|.|.+|.|..||-
T Consensus 43 R~pe~H~CtfDyK 55 (64)
T d1wfha_ 43 RYPEVHGCTFDFK 55 (64)
T ss_dssp CSTTTTTCCCCCS
T ss_pred CCCcCcCCCCcch
Confidence 7899999988763
No 8
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}
Probab=15.27 E-value=33 Score=22.05 Aligned_cols=21 Identities=33% Similarity=0.820 Sum_probs=17.4
Q ss_pred ccHHHHHHHHHhhceeeccCCCC
Q psy12375 96 ISEGRLREIRAEFLYWFFDRGGD 118 (216)
Q Consensus 96 i~~~rL~eiR~~fMYwf~D~gg~ 118 (216)
||++++++||+-|. .+|+.++
T Consensus 3 lt~~e~~~l~~~F~--~~D~~~~ 23 (146)
T d1exra_ 3 LTEEQIAEFKEAFA--LFDKDGD 23 (146)
T ss_dssp CCHHHHHHHHHHHH--HHCTTCS
T ss_pred CCHHHHHHHHHHHH--HHcCCCC
Confidence 89999999999886 4677766
No 9
>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.74 E-value=35 Score=22.11 Aligned_cols=18 Identities=11% Similarity=0.021 Sum_probs=15.0
Q ss_pred ceeccHHHHHHHHHhhce
Q psy12375 93 YYVISEGRLREIRAEFLY 110 (216)
Q Consensus 93 ~Y~i~~~rL~eiR~~fMY 110 (216)
+|+||+++++++++-|=.
T Consensus 1 pw~ls~ee~~~y~~~F~~ 18 (95)
T d2jxca1 1 PWAVKPEDKAKYDAIFDS 18 (95)
T ss_dssp CCSSCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHH
Confidence 578999999999997643
No 10
>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=13.40 E-value=29 Score=24.05 Aligned_cols=12 Identities=33% Similarity=0.841 Sum_probs=10.1
Q ss_pred CCCCCcCCCCCc
Q psy12375 2 RIPADHQCDHDF 13 (216)
Q Consensus 2 ~~~~~~~~~~~~ 13 (216)
|.|.+|.|..||
T Consensus 54 R~pe~H~CtfDy 65 (85)
T d1wffa_ 54 RYAEAHGCNYDY 65 (85)
T ss_dssp CSTGGGTCCSCC
T ss_pred CCCcCcCCCcch
Confidence 789999997665
Done!