RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy12375
         (216 letters)



>d1uoza_ c.6.1.1 (A:) Putative cellulase Rv0062 (Cel6, CelA1)
           {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 301

 Score = 25.5 bits (56), Expect = 5.4
 Identities = 8/30 (26%), Positives = 10/30 (33%)

Query: 71  NYGPTSNRYAPATFRSGGLYNDYYVISEGR 100
           N+  T          SG     +YVI   R
Sbjct: 198 NFYTTDEEIGYGEAISGLTNGSHYVIDTSR 227


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.140    0.452 

Gapped
Lambda     K      H
   0.267   0.0475    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 894,505
Number of extensions: 42853
Number of successful extensions: 110
Number of sequences better than 10.0: 1
Number of HSP's gapped: 110
Number of HSP's successfully gapped: 4
Length of query: 216
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 134
Effective length of database: 1,281,736
Effective search space: 171752624
Effective search space used: 171752624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.0 bits)