Query psy12376
Match_columns 89
No_of_seqs 102 out of 1326
Neff 9.1
Searched_HMMs 46136
Date Fri Aug 16 17:33:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12376.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12376hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 99.8 2.4E-20 5.3E-25 125.0 7.5 86 2-87 155-253 (480)
2 KOG0266|consensus 99.7 5.4E-17 1.2E-21 112.5 10.9 84 2-85 201-292 (456)
3 KOG0272|consensus 99.7 1.1E-17 2.4E-22 113.0 6.7 86 2-87 343-436 (459)
4 KOG0263|consensus 99.7 1.7E-17 3.6E-22 117.9 6.7 85 2-86 533-624 (707)
5 KOG0266|consensus 99.7 4.3E-16 9.4E-21 108.0 10.4 83 1-83 243-334 (456)
6 KOG0271|consensus 99.7 1.4E-16 3.1E-21 107.1 7.2 84 1-84 364-454 (480)
7 KOG0272|consensus 99.7 1.4E-16 3.1E-21 107.7 7.1 84 2-85 301-391 (459)
8 PTZ00421 coronin; Provisional 99.7 2E-15 4.4E-20 105.6 11.6 85 2-86 73-173 (493)
9 KOG0285|consensus 99.6 2.9E-15 6.2E-20 100.3 8.9 86 2-87 149-283 (460)
10 PTZ00421 coronin; Provisional 99.6 1.1E-14 2.3E-19 102.1 12.1 82 2-83 123-212 (493)
11 KOG0319|consensus 99.6 6.5E-15 1.4E-19 104.8 7.9 83 2-84 503-592 (775)
12 KOG0263|consensus 99.6 4E-15 8.7E-20 105.9 6.6 85 2-86 491-582 (707)
13 KOG0265|consensus 99.6 2.1E-14 4.5E-19 94.2 9.4 86 2-87 45-138 (338)
14 KOG0273|consensus 99.6 1.1E-14 2.3E-19 99.8 8.2 87 1-87 356-458 (524)
15 KOG0286|consensus 99.6 3.5E-14 7.6E-19 93.0 9.6 86 1-87 142-235 (343)
16 KOG0295|consensus 99.6 6.8E-14 1.5E-18 93.6 9.9 84 2-85 275-380 (406)
17 KOG0291|consensus 99.5 6.5E-14 1.4E-18 100.3 10.2 78 2-79 348-432 (893)
18 KOG0286|consensus 99.5 8.1E-14 1.8E-18 91.3 9.5 85 2-86 53-191 (343)
19 KOG0316|consensus 99.5 5.6E-14 1.2E-18 90.1 8.5 85 2-86 15-106 (307)
20 KOG0319|consensus 99.5 4.1E-14 8.8E-19 100.8 8.5 82 3-84 462-550 (775)
21 KOG0265|consensus 99.5 5.2E-14 1.1E-18 92.3 7.9 76 2-77 88-171 (338)
22 KOG0315|consensus 99.5 1.9E-13 4.1E-18 88.2 9.8 81 3-83 214-302 (311)
23 KOG0281|consensus 99.5 8.6E-15 1.9E-19 98.0 3.7 83 2-86 318-405 (499)
24 PTZ00420 coronin; Provisional 99.5 3.5E-13 7.6E-18 95.7 11.7 82 2-84 123-212 (568)
25 PTZ00420 coronin; Provisional 99.5 3.4E-13 7.3E-18 95.8 11.4 77 2-78 72-165 (568)
26 KOG0285|consensus 99.5 1.2E-13 2.7E-18 92.6 8.4 85 2-86 233-324 (460)
27 cd00200 WD40 WD40 domain, foun 99.5 3.7E-13 8.1E-18 84.3 10.1 83 2-84 7-96 (289)
28 KOG0302|consensus 99.5 4.8E-14 1E-18 94.8 6.1 88 1-88 254-354 (440)
29 KOG0274|consensus 99.5 2.4E-13 5.1E-18 96.1 9.8 87 2-88 247-338 (537)
30 KOG0279|consensus 99.5 1.7E-13 3.7E-18 89.2 8.2 74 2-75 61-141 (315)
31 KOG0284|consensus 99.5 2.4E-14 5.3E-19 96.8 4.3 83 4-86 180-269 (464)
32 KOG0645|consensus 99.5 4.4E-13 9.4E-18 87.1 9.8 83 2-84 59-153 (312)
33 KOG0292|consensus 99.5 1.3E-13 2.8E-18 100.4 7.6 86 2-87 49-141 (1202)
34 KOG0318|consensus 99.5 2E-13 4.4E-18 94.7 8.1 86 1-86 484-578 (603)
35 KOG0318|consensus 99.5 4.7E-13 1E-17 92.9 9.9 74 5-78 191-274 (603)
36 KOG0273|consensus 99.5 3E-13 6.6E-18 92.8 8.3 82 2-83 274-403 (524)
37 KOG0279|consensus 99.5 3.7E-13 7.9E-18 87.7 8.0 83 2-85 103-196 (315)
38 KOG0276|consensus 99.5 6.7E-14 1.4E-18 98.8 4.7 86 2-87 138-233 (794)
39 KOG0308|consensus 99.5 3E-13 6.4E-18 95.7 7.8 83 2-84 169-258 (735)
40 KOG0973|consensus 99.5 6.1E-13 1.3E-17 97.4 9.4 83 2-84 67-174 (942)
41 KOG0647|consensus 99.4 6.4E-13 1.4E-17 87.4 8.2 75 2-77 70-153 (347)
42 KOG0282|consensus 99.4 1.1E-13 2.4E-18 94.9 4.2 76 2-77 212-296 (503)
43 KOG0643|consensus 99.4 1.6E-12 3.4E-17 84.6 9.3 78 1-78 7-91 (327)
44 KOG0275|consensus 99.4 4.3E-14 9.3E-19 94.2 1.9 82 5-86 214-311 (508)
45 KOG0316|consensus 99.4 5E-13 1.1E-17 85.8 6.5 80 4-83 183-271 (307)
46 KOG0647|consensus 99.4 6.2E-13 1.3E-17 87.4 6.9 81 4-85 27-117 (347)
47 KOG0277|consensus 99.4 1.1E-12 2.3E-17 84.9 7.5 81 3-83 103-192 (311)
48 KOG0264|consensus 99.4 1.8E-12 3.9E-17 88.2 8.9 84 2-85 270-377 (422)
49 KOG0289|consensus 99.4 9.6E-13 2.1E-17 89.8 7.3 72 6-77 349-427 (506)
50 KOG0293|consensus 99.4 1.1E-12 2.5E-17 89.2 7.3 84 4-87 395-488 (519)
51 KOG0274|consensus 99.4 1.4E-12 3E-17 92.3 7.8 81 3-85 330-417 (537)
52 KOG0281|consensus 99.4 9.8E-13 2.1E-17 88.3 6.6 85 1-87 234-366 (499)
53 KOG0264|consensus 99.4 5.7E-13 1.2E-17 90.6 5.5 86 2-87 225-322 (422)
54 PLN00181 protein SPA1-RELATED; 99.4 4.5E-12 9.8E-17 92.7 10.3 84 2-86 573-666 (793)
55 KOG0283|consensus 99.4 1.1E-12 2.4E-17 94.0 6.4 76 2-77 265-406 (712)
56 KOG0292|consensus 99.4 6.9E-12 1.5E-16 91.6 10.0 69 1-69 90-165 (1202)
57 KOG0296|consensus 99.4 1.6E-11 3.4E-16 82.4 10.7 85 2-86 104-195 (399)
58 KOG0299|consensus 99.4 1E-12 2.2E-17 89.9 5.2 83 2-84 200-289 (479)
59 KOG0315|consensus 99.4 3.7E-12 8.1E-17 82.2 7.4 75 2-77 81-162 (311)
60 cd00200 WD40 WD40 domain, foun 99.4 2.3E-11 5E-16 76.1 10.9 82 3-84 50-138 (289)
61 KOG0276|consensus 99.4 4.4E-12 9.6E-17 89.8 8.4 85 3-87 96-189 (794)
62 KOG1407|consensus 99.4 2E-12 4.3E-17 83.8 6.1 76 3-78 188-270 (313)
63 KOG0306|consensus 99.4 3.2E-12 6.8E-17 91.8 7.5 87 2-88 506-599 (888)
64 KOG0275|consensus 99.3 1.4E-13 3.1E-18 91.8 0.3 84 1-84 260-351 (508)
65 PLN00181 protein SPA1-RELATED; 99.3 2.1E-11 4.5E-16 89.3 11.3 77 4-80 532-617 (793)
66 KOG0296|consensus 99.3 2.3E-11 5E-16 81.6 9.9 73 6-78 150-229 (399)
67 KOG0294|consensus 99.3 9.6E-12 2.1E-16 82.3 8.0 81 3-85 42-131 (362)
68 KOG0284|consensus 99.3 8.9E-13 1.9E-17 89.4 3.1 85 3-87 221-312 (464)
69 KOG0295|consensus 99.3 9.1E-12 2E-16 83.5 7.5 85 2-86 233-339 (406)
70 KOG0283|consensus 99.3 6.8E-12 1.5E-16 90.1 7.1 73 1-75 366-446 (712)
71 KOG1446|consensus 99.3 3.8E-11 8.2E-16 79.1 10.0 74 4-77 14-138 (311)
72 KOG0310|consensus 99.3 2.7E-11 5.8E-16 83.4 9.6 70 2-71 108-186 (487)
73 KOG1446|consensus 99.3 5.8E-11 1.3E-15 78.2 10.7 83 5-87 188-281 (311)
74 KOG0313|consensus 99.3 9.1E-12 2E-16 83.9 6.9 83 4-86 300-394 (423)
75 KOG0973|consensus 99.3 1.5E-11 3.2E-16 90.4 8.4 80 2-81 127-213 (942)
76 KOG0649|consensus 99.3 2.9E-11 6.4E-16 78.1 8.9 74 6-79 116-196 (325)
77 KOG0305|consensus 99.3 9.1E-12 2E-16 86.8 7.0 80 4-83 217-345 (484)
78 KOG0645|consensus 99.3 5.2E-11 1.1E-15 77.5 9.9 82 2-83 103-197 (312)
79 KOG0267|consensus 99.3 4.4E-12 9.6E-17 90.7 5.4 88 1-88 109-203 (825)
80 KOG1273|consensus 99.3 1.1E-11 2.5E-16 82.2 6.7 71 7-77 26-103 (405)
81 KOG0306|consensus 99.3 2.4E-11 5.3E-16 87.4 8.5 82 2-83 105-193 (888)
82 KOG0293|consensus 99.3 1.6E-11 3.5E-16 83.7 6.8 77 2-78 222-308 (519)
83 KOG0641|consensus 99.3 4.4E-11 9.5E-16 76.9 8.4 76 3-78 88-221 (350)
84 KOG0305|consensus 99.3 1.9E-11 4E-16 85.3 6.9 76 2-77 299-384 (484)
85 KOG0277|consensus 99.3 5.4E-11 1.2E-15 77.1 8.5 81 2-83 145-236 (311)
86 KOG0303|consensus 99.2 1.3E-11 2.9E-16 83.6 5.1 82 2-84 79-176 (472)
87 KOG0310|consensus 99.2 1.8E-11 3.8E-16 84.3 5.4 84 3-86 67-158 (487)
88 KOG0300|consensus 99.2 4.3E-11 9.4E-16 79.9 6.1 85 2-86 270-362 (481)
89 KOG0269|consensus 99.2 2.6E-11 5.6E-16 87.3 5.0 67 5-71 177-252 (839)
90 KOG1009|consensus 99.2 2.2E-10 4.7E-15 77.8 9.0 81 2-82 63-166 (434)
91 KOG0640|consensus 99.2 9.7E-11 2.1E-15 77.9 6.3 79 5-83 217-306 (430)
92 KOG0282|consensus 99.1 2.6E-11 5.6E-16 83.5 2.9 84 1-85 255-346 (503)
93 KOG2919|consensus 99.1 1.1E-10 2.5E-15 77.7 5.5 84 2-85 248-344 (406)
94 KOG0289|consensus 99.1 4.4E-10 9.6E-15 77.0 8.2 85 2-86 301-394 (506)
95 KOG0639|consensus 99.1 3.8E-11 8.2E-16 83.7 3.1 68 7-74 512-586 (705)
96 KOG0301|consensus 99.1 1.7E-10 3.7E-15 82.4 6.2 79 2-84 138-222 (745)
97 KOG0640|consensus 99.1 2.2E-10 4.7E-15 76.3 6.1 76 2-77 259-343 (430)
98 KOG1408|consensus 99.1 6.9E-11 1.5E-15 85.2 4.0 83 4-86 459-552 (1080)
99 KOG0294|consensus 99.1 6.1E-10 1.3E-14 73.9 7.8 75 2-76 81-164 (362)
100 KOG0302|consensus 99.1 3.7E-10 8E-15 76.3 6.8 67 3-69 301-378 (440)
101 KOG2096|consensus 99.1 7.6E-10 1.7E-14 73.8 8.1 35 2-36 84-118 (420)
102 KOG1310|consensus 99.1 2.5E-10 5.4E-15 80.4 6.0 69 2-70 48-126 (758)
103 KOG0313|consensus 99.1 3.3E-10 7.2E-15 76.5 6.4 68 1-68 342-417 (423)
104 KOG0267|consensus 99.1 4E-11 8.7E-16 85.9 2.1 85 2-86 68-159 (825)
105 KOG1034|consensus 99.1 9.8E-10 2.1E-14 73.3 8.0 85 3-87 88-187 (385)
106 KOG0291|consensus 99.1 1.9E-09 4.1E-14 77.9 9.4 80 5-84 308-395 (893)
107 KOG1007|consensus 99.0 6.1E-10 1.3E-14 73.5 6.1 78 3-81 169-258 (370)
108 KOG1036|consensus 99.0 1E-09 2.2E-14 72.4 7.1 82 4-87 13-100 (323)
109 KOG0278|consensus 99.0 8.6E-10 1.9E-14 71.7 6.5 72 3-74 223-302 (334)
110 KOG0303|consensus 99.0 1.2E-09 2.6E-14 74.3 7.4 83 2-85 129-219 (472)
111 KOG0772|consensus 99.0 3.5E-10 7.6E-15 79.0 4.8 66 5-70 318-395 (641)
112 KOG0643|consensus 99.0 2.5E-09 5.4E-14 69.9 8.4 74 4-77 147-228 (327)
113 KOG0299|consensus 99.0 9.3E-10 2E-14 75.6 6.7 86 2-87 140-250 (479)
114 KOG0644|consensus 99.0 1.2E-10 2.7E-15 84.8 2.5 83 2-84 188-277 (1113)
115 KOG1034|consensus 99.0 9.4E-10 2E-14 73.4 6.4 71 2-72 133-214 (385)
116 PF00400 WD40: WD domain, G-be 99.0 1.4E-09 3.1E-14 51.2 5.2 31 2-32 9-39 (39)
117 KOG0646|consensus 99.0 2.6E-09 5.6E-14 73.6 8.3 72 5-76 124-213 (476)
118 KOG1407|consensus 99.0 1.2E-09 2.6E-14 71.1 6.3 75 3-77 19-103 (313)
119 KOG4283|consensus 99.0 2.5E-09 5.4E-14 70.9 7.9 87 2-88 141-240 (397)
120 KOG0646|consensus 99.0 6.6E-10 1.4E-14 76.4 5.1 67 3-69 80-153 (476)
121 KOG1332|consensus 99.0 7.6E-10 1.6E-14 71.5 4.7 85 3-87 10-108 (299)
122 KOG0301|consensus 99.0 5.6E-09 1.2E-13 74.8 9.2 66 2-69 177-249 (745)
123 KOG1332|consensus 99.0 3.1E-09 6.8E-14 68.7 7.1 86 2-87 54-155 (299)
124 KOG0300|consensus 99.0 1.1E-09 2.5E-14 73.2 5.2 82 2-83 188-316 (481)
125 KOG2048|consensus 99.0 2.4E-09 5.1E-14 76.4 6.9 81 4-84 154-248 (691)
126 KOG1274|consensus 99.0 3.2E-09 6.9E-14 77.7 7.7 78 3-80 95-179 (933)
127 KOG0278|consensus 98.9 5E-10 1.1E-14 72.7 2.7 76 3-78 99-182 (334)
128 KOG2394|consensus 98.9 4.5E-09 9.8E-14 73.8 7.3 71 5-75 333-458 (636)
129 KOG1445|consensus 98.9 5.4E-10 1.2E-14 79.9 2.7 79 6-84 629-723 (1012)
130 KOG0268|consensus 98.9 1.3E-09 2.8E-14 73.5 3.9 69 2-70 64-138 (433)
131 KOG0270|consensus 98.9 1.2E-09 2.7E-14 74.8 3.7 69 2-70 241-318 (463)
132 KOG0288|consensus 98.9 7.7E-10 1.7E-14 75.4 2.6 72 5-76 220-298 (459)
133 KOG3914|consensus 98.9 3.4E-09 7.3E-14 71.8 5.6 77 1-77 148-231 (390)
134 KOG2110|consensus 98.9 2E-08 4.4E-13 67.7 9.2 70 3-72 172-251 (391)
135 KOG0269|consensus 98.9 2.5E-09 5.4E-14 77.3 4.9 84 3-86 132-225 (839)
136 PF08662 eIF2A: Eukaryotic tra 98.9 8.5E-08 1.8E-12 60.2 11.0 74 4-78 59-142 (194)
137 KOG0308|consensus 98.9 1.5E-08 3.2E-13 72.4 8.1 70 2-71 211-287 (735)
138 KOG0288|consensus 98.9 2.5E-08 5.3E-13 68.2 8.8 75 4-78 341-426 (459)
139 KOG1036|consensus 98.9 1.8E-08 3.8E-13 66.7 7.8 67 2-70 52-125 (323)
140 KOG2394|consensus 98.9 5.1E-09 1.1E-13 73.5 5.4 79 5-83 291-376 (636)
141 KOG1063|consensus 98.9 1.7E-08 3.7E-13 72.4 8.0 70 2-71 570-650 (764)
142 KOG0322|consensus 98.9 3.3E-09 7.2E-14 69.2 4.0 62 7-68 254-322 (323)
143 KOG1539|consensus 98.8 3.2E-08 6.9E-13 72.2 8.5 69 2-70 574-649 (910)
144 COG2319 FOG: WD40 repeat [Gene 98.8 1.4E-07 2.9E-12 61.2 10.8 82 2-83 153-244 (466)
145 KOG0639|consensus 98.8 3.5E-08 7.6E-13 69.2 7.8 80 5-86 466-556 (705)
146 KOG0268|consensus 98.8 4.7E-09 1E-13 70.9 3.2 70 2-73 270-349 (433)
147 KOG2445|consensus 98.8 3.2E-08 7E-13 65.7 6.6 67 2-69 221-318 (361)
148 KOG0641|consensus 98.8 7.7E-08 1.7E-12 62.1 8.2 66 5-70 232-304 (350)
149 KOG1274|consensus 98.8 6.9E-08 1.5E-12 71.0 8.9 37 2-38 136-172 (933)
150 KOG4283|consensus 98.8 7.7E-08 1.7E-12 63.9 8.0 87 2-88 99-195 (397)
151 TIGR03866 PQQ_ABC_repeats PQQ- 98.8 1.6E-07 3.5E-12 60.4 9.5 73 6-78 32-112 (300)
152 KOG2055|consensus 98.7 7E-08 1.5E-12 66.8 8.0 69 2-70 342-418 (514)
153 KOG0290|consensus 98.7 4.4E-08 9.6E-13 64.8 6.8 70 1-70 193-319 (364)
154 PF08662 eIF2A: Eukaryotic tra 98.7 2.9E-07 6.3E-12 57.8 10.3 69 5-75 101-184 (194)
155 KOG0321|consensus 98.7 3.3E-08 7.1E-13 70.6 6.3 72 1-72 97-178 (720)
156 KOG1538|consensus 98.7 4.7E-08 1E-12 70.6 6.8 63 6-69 14-83 (1081)
157 KOG1273|consensus 98.7 1.5E-07 3.2E-12 63.0 8.6 75 3-77 64-191 (405)
158 KOG2111|consensus 98.7 1.8E-07 3.9E-12 62.3 9.0 70 2-71 179-258 (346)
159 KOG1445|consensus 98.7 1.1E-08 2.3E-13 73.5 3.3 72 2-73 675-754 (1012)
160 KOG2445|consensus 98.7 1.5E-07 3.3E-12 62.6 8.1 67 2-68 11-90 (361)
161 KOG0771|consensus 98.7 4.3E-08 9.4E-13 66.7 5.7 70 8-78 148-224 (398)
162 KOG0270|consensus 98.7 9.5E-08 2.1E-12 65.7 7.0 66 4-69 329-404 (463)
163 KOG3881|consensus 98.6 9.7E-08 2.1E-12 64.9 6.1 71 5-75 248-326 (412)
164 KOG1539|consensus 98.6 4.2E-07 9.2E-12 66.6 9.6 83 3-85 201-292 (910)
165 KOG0642|consensus 98.6 1.7E-07 3.6E-12 66.1 7.0 72 2-73 342-430 (577)
166 KOG0772|consensus 98.6 2.8E-07 6.2E-12 64.8 8.0 66 5-70 215-300 (641)
167 KOG0307|consensus 98.6 4.7E-08 1E-12 72.9 4.2 81 2-82 114-205 (1049)
168 KOG2106|consensus 98.6 6.5E-07 1.4E-11 62.9 9.2 77 4-82 407-491 (626)
169 PF00400 WD40: WD domain, G-be 98.6 1.5E-07 3.2E-12 44.1 4.2 32 36-67 1-39 (39)
170 KOG0974|consensus 98.6 3.2E-07 6.9E-12 68.1 7.7 80 2-82 173-258 (967)
171 KOG0307|consensus 98.6 7.4E-08 1.6E-12 71.9 4.1 66 5-70 65-148 (1049)
172 KOG1408|consensus 98.6 5.4E-07 1.2E-11 65.7 8.2 79 6-84 598-686 (1080)
173 KOG0642|consensus 98.5 9.8E-08 2.1E-12 67.2 4.2 66 3-68 293-373 (577)
174 COG2319 FOG: WD40 repeat [Gene 98.5 2.1E-06 4.7E-11 55.6 10.2 81 3-83 197-286 (466)
175 TIGR03866 PQQ_ABC_repeats PQQ- 98.5 1.5E-06 3.3E-11 55.8 9.3 70 8-78 210-288 (300)
176 KOG0321|consensus 98.5 1.7E-07 3.6E-12 67.1 5.0 74 1-74 141-253 (720)
177 KOG0650|consensus 98.5 7.7E-07 1.7E-11 63.5 8.2 65 2-68 398-471 (733)
178 KOG1409|consensus 98.5 6.9E-07 1.5E-11 60.3 7.5 72 2-73 195-274 (404)
179 KOG1523|consensus 98.5 6E-07 1.3E-11 60.0 6.9 72 4-75 10-92 (361)
180 KOG0649|consensus 98.5 9.6E-07 2.1E-11 57.5 7.6 86 2-88 154-256 (325)
181 KOG2695|consensus 98.5 3.1E-07 6.8E-12 62.0 5.3 76 3-78 297-385 (425)
182 KOG0290|consensus 98.5 8.1E-07 1.8E-11 59.0 7.1 73 3-75 149-233 (364)
183 KOG2048|consensus 98.5 1.8E-06 3.8E-11 62.1 9.2 71 5-75 111-190 (691)
184 KOG1007|consensus 98.5 5.8E-07 1.3E-11 59.6 6.2 65 6-70 216-290 (370)
185 KOG1334|consensus 98.5 7.9E-08 1.7E-12 67.0 2.2 68 7-74 396-471 (559)
186 KOG0771|consensus 98.4 2.9E-06 6.2E-11 58.1 8.9 34 2-36 184-217 (398)
187 KOG2096|consensus 98.4 7E-07 1.5E-11 59.9 5.7 64 6-69 230-308 (420)
188 KOG1009|consensus 98.4 3.7E-07 8E-12 62.4 4.4 74 2-75 121-201 (434)
189 PF11768 DUF3312: Protein of u 98.4 6.1E-06 1.3E-10 58.6 9.5 69 2-72 257-332 (545)
190 KOG2110|consensus 98.4 6.5E-06 1.4E-10 55.9 9.2 75 6-80 131-215 (391)
191 KOG1063|consensus 98.4 1.9E-06 4.2E-11 62.2 6.9 69 2-70 523-603 (764)
192 KOG0322|consensus 98.4 2.1E-06 4.6E-11 56.3 6.5 36 52-87 264-299 (323)
193 KOG4328|consensus 98.3 3.5E-06 7.6E-11 58.5 7.6 70 4-73 186-269 (498)
194 KOG1538|consensus 98.3 4.4E-06 9.6E-11 60.8 8.3 33 2-34 51-83 (1081)
195 KOG2919|consensus 98.3 3.2E-06 6.9E-11 56.9 7.0 76 8-84 162-253 (406)
196 KOG2106|consensus 98.3 2.8E-06 6.1E-11 59.8 7.0 62 6-68 248-315 (626)
197 KOG1587|consensus 98.3 3.9E-06 8.4E-11 60.1 7.8 67 4-70 242-324 (555)
198 KOG4328|consensus 98.3 1.1E-06 2.4E-11 60.9 4.8 81 6-86 281-374 (498)
199 KOG4547|consensus 98.3 7.7E-06 1.7E-10 57.9 8.7 83 2-86 100-189 (541)
200 KOG1188|consensus 98.3 1.5E-06 3.2E-11 58.5 4.9 59 17-75 41-108 (376)
201 KOG4227|consensus 98.3 3.4E-06 7.3E-11 58.2 6.2 76 2-77 54-143 (609)
202 KOG1524|consensus 98.3 1.7E-06 3.7E-11 61.4 4.9 79 3-83 103-229 (737)
203 KOG0974|consensus 98.3 2.9E-06 6.2E-11 63.2 6.2 76 9-84 138-221 (967)
204 KOG4378|consensus 98.2 9.8E-06 2.1E-10 57.2 8.0 82 2-83 119-210 (673)
205 smart00320 WD40 WD40 repeats. 98.2 4.2E-06 9E-11 37.0 4.2 30 3-32 11-40 (40)
206 KOG4378|consensus 98.2 6.3E-06 1.4E-10 58.1 6.5 81 3-84 207-296 (673)
207 KOG1272|consensus 98.2 1.5E-06 3.2E-11 60.6 3.4 71 6-76 253-330 (545)
208 KOG0280|consensus 98.2 9.2E-06 2E-10 54.0 6.6 67 3-69 164-241 (339)
209 PF12894 Apc4_WD40: Anaphase-p 98.2 1.3E-05 2.8E-10 39.6 5.4 34 4-38 11-44 (47)
210 KOG1963|consensus 98.1 1.3E-05 2.9E-10 58.9 7.0 76 3-79 204-290 (792)
211 KOG1272|consensus 98.1 8.8E-06 1.9E-10 56.8 5.8 68 1-68 290-361 (545)
212 KOG1310|consensus 98.1 1.1E-05 2.3E-10 57.6 6.3 58 13-70 633-697 (758)
213 KOG0644|consensus 98.1 7.8E-07 1.7E-11 65.6 0.4 68 2-69 230-300 (1113)
214 PRK05137 tolB translocation pr 98.1 0.00011 2.3E-09 51.0 10.5 71 4-75 201-284 (435)
215 PRK01742 tolB translocation pr 98.1 5.5E-05 1.2E-09 52.5 8.9 71 4-74 203-285 (429)
216 KOG1064|consensus 98.1 3.2E-06 7E-11 66.4 3.1 73 2-77 2334-2406(2439)
217 PF02239 Cytochrom_D1: Cytochr 98.0 8.8E-05 1.9E-09 50.9 9.4 70 8-77 40-116 (369)
218 KOG4714|consensus 98.0 4.6E-06 1E-10 54.7 2.8 66 5-70 180-255 (319)
219 KOG2055|consensus 98.0 4.5E-05 9.8E-10 53.2 7.5 76 5-81 214-302 (514)
220 KOG0650|consensus 98.0 1.4E-05 3E-10 57.3 5.1 63 5-67 608-678 (733)
221 KOG1188|consensus 98.0 3.3E-05 7.2E-10 52.2 6.5 75 3-77 164-250 (376)
222 PRK03629 tolB translocation pr 97.9 0.00038 8.2E-09 48.4 10.9 73 5-77 199-283 (429)
223 KOG4547|consensus 97.9 7.8E-05 1.7E-09 53.0 7.4 62 6-69 146-220 (541)
224 KOG1517|consensus 97.9 4.3E-05 9.3E-10 58.0 6.3 66 7-72 1211-1290(1387)
225 KOG3881|consensus 97.9 0.00011 2.3E-09 50.5 7.4 83 4-86 202-295 (412)
226 KOG1587|consensus 97.8 3.2E-05 6.9E-10 55.5 4.9 73 1-73 395-476 (555)
227 KOG2139|consensus 97.8 9.1E-05 2E-09 50.7 6.7 65 5-69 196-268 (445)
228 PRK01742 tolB translocation pr 97.8 0.00017 3.6E-09 50.1 7.9 79 8-87 336-421 (429)
229 KOG0280|consensus 97.8 0.00022 4.8E-09 47.6 7.5 63 7-69 124-196 (339)
230 KOG1240|consensus 97.8 0.00019 4.2E-09 55.1 7.9 68 3-70 1047-1129(1431)
231 KOG2321|consensus 97.8 0.00011 2.3E-09 52.8 6.2 69 5-73 176-262 (703)
232 KOG1334|consensus 97.7 4.1E-05 8.9E-10 53.8 3.8 83 6-88 338-443 (559)
233 PRK04922 tolB translocation pr 97.7 0.00043 9.4E-09 48.1 8.8 72 4-75 203-286 (433)
234 PRK02889 tolB translocation pr 97.7 0.00055 1.2E-08 47.5 9.2 65 4-68 195-269 (427)
235 KOG4227|consensus 97.7 0.00039 8.5E-09 48.3 8.1 70 3-72 104-182 (609)
236 TIGR02800 propeller_TolB tol-p 97.6 0.0015 3.3E-08 44.6 9.8 70 5-75 190-272 (417)
237 PRK00178 tolB translocation pr 97.6 0.0016 3.4E-08 45.0 9.8 72 4-75 198-281 (430)
238 KOG2695|consensus 97.5 0.0001 2.2E-09 50.2 3.4 77 6-83 254-346 (425)
239 KOG1963|consensus 97.5 0.00057 1.2E-08 50.6 7.4 65 3-68 250-321 (792)
240 KOG2111|consensus 97.5 0.00092 2E-08 45.0 7.7 75 7-81 139-224 (346)
241 PRK11028 6-phosphogluconolacto 97.5 0.0016 3.4E-08 43.4 8.9 65 6-70 81-157 (330)
242 KOG1354|consensus 97.5 0.00083 1.8E-08 45.9 7.1 66 5-70 26-117 (433)
243 PRK03629 tolB translocation pr 97.5 0.003 6.4E-08 44.0 10.1 79 7-87 333-423 (429)
244 KOG2079|consensus 97.5 0.00045 9.8E-09 52.6 6.3 63 4-68 130-202 (1206)
245 PRK04792 tolB translocation pr 97.5 0.0018 3.8E-08 45.4 9.0 71 5-75 218-300 (448)
246 KOG2321|consensus 97.5 0.00042 9.1E-09 49.9 5.7 72 7-78 136-214 (703)
247 smart00320 WD40 WD40 repeats. 97.4 0.00042 9E-09 30.1 3.9 29 39-67 5-40 (40)
248 TIGR03300 assembly_YfgL outer 97.4 0.0021 4.6E-08 43.6 8.8 67 15-81 278-350 (377)
249 KOG1354|consensus 97.4 0.00059 1.3E-08 46.6 5.8 69 5-74 273-364 (433)
250 KOG4532|consensus 97.4 0.0033 7.2E-08 41.9 9.1 75 4-78 203-291 (344)
251 KOG1517|consensus 97.4 0.00065 1.4E-08 51.9 6.4 71 3-75 1253-1338(1387)
252 PRK11028 6-phosphogluconolacto 97.4 0.0034 7.4E-08 41.8 9.1 63 7-69 128-205 (330)
253 KOG1240|consensus 97.4 0.0015 3.3E-08 50.5 8.0 75 5-79 1196-1283(1431)
254 KOG1645|consensus 97.3 0.00074 1.6E-08 46.8 5.7 66 6-71 195-268 (463)
255 PRK05137 tolB translocation pr 97.2 0.005 1.1E-07 42.8 9.1 70 5-75 246-328 (435)
256 PF14783 BBS2_Mid: Ciliary BBS 97.2 0.0089 1.9E-07 34.6 8.5 57 10-69 8-71 (111)
257 PF14655 RAB3GAP2_N: Rab3 GTPa 97.2 0.007 1.5E-07 42.4 9.3 72 6-77 309-406 (415)
258 KOG4640|consensus 97.2 0.0035 7.6E-08 45.6 7.8 72 4-76 20-99 (665)
259 KOG4640|consensus 97.1 0.0013 2.9E-08 47.6 5.3 35 6-40 63-98 (665)
260 PF13360 PQQ_2: PQQ-like domai 97.1 0.0067 1.5E-07 38.2 8.0 63 14-76 34-101 (238)
261 KOG4190|consensus 97.1 0.00034 7.3E-09 50.5 2.1 74 2-75 733-818 (1034)
262 KOG4532|consensus 97.1 0.0079 1.7E-07 40.1 8.2 64 7-70 161-234 (344)
263 KOG1912|consensus 97.0 0.0016 3.5E-08 48.6 5.0 77 6-84 17-112 (1062)
264 PRK02889 tolB translocation pr 97.0 0.015 3.3E-07 40.5 9.5 78 8-86 331-419 (427)
265 KOG1064|consensus 97.0 0.00046 1E-08 55.1 2.0 74 5-79 2252-2376(2439)
266 KOG1523|consensus 97.0 0.0039 8.5E-08 42.2 6.1 67 3-69 54-130 (361)
267 KOG1275|consensus 96.9 0.0018 3.9E-08 48.9 4.7 63 15-77 186-262 (1118)
268 PRK04922 tolB translocation pr 96.9 0.019 4.1E-07 40.0 9.3 73 8-82 339-423 (433)
269 TIGR03300 assembly_YfgL outer 96.9 0.017 3.7E-07 39.2 8.8 63 15-77 104-171 (377)
270 PRK01029 tolB translocation pr 96.8 0.024 5.3E-07 39.6 9.6 71 6-77 328-411 (428)
271 COG5170 CDC55 Serine/threonine 96.8 0.0071 1.5E-07 41.2 6.3 68 4-71 26-119 (460)
272 TIGR02800 propeller_TolB tol-p 96.8 0.028 6.1E-07 38.4 9.4 67 7-74 280-359 (417)
273 PF15492 Nbas_N: Neuroblastoma 96.8 0.0042 9.1E-08 41.2 5.0 39 4-42 229-267 (282)
274 PLN02919 haloacid dehalogenase 96.7 0.041 8.9E-07 42.7 10.9 67 7-73 806-892 (1057)
275 KOG1832|consensus 96.7 0.0027 5.8E-08 48.3 4.4 66 4-69 1101-1175(1516)
276 PRK00178 tolB translocation pr 96.7 0.031 6.7E-07 38.7 9.2 68 7-75 245-325 (430)
277 KOG3914|consensus 96.7 0.002 4.3E-08 44.3 3.1 40 2-42 192-231 (390)
278 TIGR02658 TTQ_MADH_Hv methylam 96.6 0.094 2E-06 36.1 11.0 71 7-77 250-338 (352)
279 KOG1524|consensus 96.6 0.0076 1.7E-07 43.5 5.9 48 3-51 185-232 (737)
280 KOG1912|consensus 96.6 0.012 2.5E-07 44.2 6.9 74 3-76 54-150 (1062)
281 PRK01029 tolB translocation pr 96.6 0.02 4.4E-07 40.0 7.7 70 7-76 283-366 (428)
282 KOG2315|consensus 96.5 0.023 5E-07 40.9 7.8 68 6-74 313-394 (566)
283 KOG2314|consensus 96.5 0.0089 1.9E-07 43.2 5.7 68 8-77 214-298 (698)
284 KOG2041|consensus 96.5 0.0093 2E-07 44.6 5.9 68 5-72 15-104 (1189)
285 COG4946 Uncharacterized protei 96.5 0.062 1.3E-06 38.6 9.4 71 2-73 357-435 (668)
286 PF08596 Lgl_C: Lethal giant l 96.4 0.056 1.2E-06 37.7 9.1 71 6-76 3-122 (395)
287 PF11768 DUF3312: Protein of u 96.4 0.0054 1.2E-07 44.1 4.1 31 6-36 301-331 (545)
288 KOG2066|consensus 96.4 0.027 6E-07 42.1 7.6 74 4-79 112-197 (846)
289 COG4946 Uncharacterized protei 96.4 0.089 1.9E-06 37.8 9.8 71 5-75 402-483 (668)
290 PF15492 Nbas_N: Neuroblastoma 96.4 0.014 3E-07 38.8 5.5 31 7-37 46-76 (282)
291 KOG4497|consensus 96.3 0.031 6.8E-07 38.4 7.2 71 5-75 49-128 (447)
292 KOG2315|consensus 96.3 0.054 1.2E-06 39.1 8.6 73 4-77 270-352 (566)
293 PF13360 PQQ_2: PQQ-like domai 96.3 0.079 1.7E-06 33.3 8.8 65 15-79 75-150 (238)
294 PLN02919 haloacid dehalogenase 96.3 0.097 2.1E-06 40.7 10.5 71 7-77 742-841 (1057)
295 PF10313 DUF2415: Uncharacteri 96.2 0.041 8.9E-07 26.6 5.4 30 6-35 2-34 (43)
296 PF02239 Cytochrom_D1: Cytochr 96.2 0.048 1E-06 37.6 7.8 60 18-77 8-74 (369)
297 TIGR02658 TTQ_MADH_Hv methylam 96.2 0.1 2.3E-06 35.9 9.3 66 12-77 53-144 (352)
298 PRK11138 outer membrane biogen 96.2 0.076 1.6E-06 36.5 8.7 62 16-77 294-361 (394)
299 PRK04792 tolB translocation pr 96.2 0.093 2E-06 36.9 9.2 68 7-75 264-344 (448)
300 KOG4497|consensus 96.1 0.0074 1.6E-07 41.3 3.3 74 9-83 13-93 (447)
301 KOG1409|consensus 96.0 0.14 3E-06 35.3 8.9 47 39-85 190-244 (404)
302 PRK11138 outer membrane biogen 96.0 0.067 1.4E-06 36.7 7.6 63 16-78 120-187 (394)
303 KOG2314|consensus 95.9 0.093 2E-06 38.2 8.0 63 7-70 252-335 (698)
304 KOG2139|consensus 95.9 0.064 1.4E-06 37.2 6.9 29 5-33 239-267 (445)
305 KOG4714|consensus 95.8 0.028 6E-07 37.4 5.0 33 3-35 222-255 (319)
306 KOG4649|consensus 95.8 0.062 1.3E-06 36.0 6.6 63 15-77 62-131 (354)
307 PF08596 Lgl_C: Lethal giant l 95.7 0.18 3.9E-06 35.2 8.9 65 4-69 86-173 (395)
308 PF08553 VID27: VID27 cytoplas 95.6 0.057 1.2E-06 40.8 6.5 62 6-68 579-646 (794)
309 KOG0882|consensus 95.5 0.034 7.3E-07 39.5 4.8 76 5-81 202-317 (558)
310 PRK02888 nitrous-oxide reducta 95.5 0.084 1.8E-06 38.9 6.9 66 5-70 321-405 (635)
311 KOG2114|consensus 95.5 0.061 1.3E-06 40.7 6.1 58 11-69 30-100 (933)
312 KOG0309|consensus 95.4 0.045 9.7E-07 41.2 5.1 84 2-86 112-206 (1081)
313 KOG2066|consensus 95.3 0.096 2.1E-06 39.4 6.6 17 17-33 50-66 (846)
314 PF07676 PD40: WD40-like Beta 95.2 0.11 2.4E-06 23.8 4.7 27 5-31 9-38 (39)
315 KOG3617|consensus 95.1 0.016 3.4E-07 44.1 2.3 64 6-69 61-131 (1416)
316 KOG4190|consensus 95.1 0.025 5.3E-07 41.4 3.1 67 6-72 878-951 (1034)
317 PF07569 Hira: TUP1-like enhan 95.0 0.54 1.2E-05 30.2 8.8 64 12-75 18-101 (219)
318 PF04762 IKI3: IKI3 family; I 95.0 0.14 3.1E-06 39.4 7.0 37 4-41 120-156 (928)
319 PRK04043 tolB translocation pr 94.9 0.87 1.9E-05 32.0 10.4 70 6-75 189-271 (419)
320 COG5354 Uncharacterized protei 94.9 0.13 2.9E-06 36.9 6.1 73 6-80 34-127 (561)
321 PF11715 Nup160: Nucleoporin N 94.7 0.25 5.4E-06 35.4 7.3 64 14-77 156-256 (547)
322 PF10282 Lactonase: Lactonase, 94.6 0.89 1.9E-05 30.8 9.8 71 6-76 246-331 (345)
323 KOG3621|consensus 94.3 0.077 1.7E-06 39.3 4.1 33 3-35 123-155 (726)
324 KOG2444|consensus 94.3 0.17 3.7E-06 32.9 5.2 66 16-81 70-144 (238)
325 TIGR03075 PQQ_enz_alc_DH PQQ-d 94.2 0.81 1.8E-05 33.1 8.9 53 25-77 440-498 (527)
326 PF10168 Nup88: Nuclear pore c 94.0 0.6 1.3E-05 35.1 8.2 66 5-70 85-180 (717)
327 KOG2395|consensus 93.9 0.25 5.4E-06 36.0 5.8 62 7-68 378-458 (644)
328 KOG3617|consensus 93.7 0.11 2.5E-06 39.8 4.0 33 2-34 99-131 (1416)
329 KOG2444|consensus 93.7 0.13 2.9E-06 33.4 3.8 56 15-70 113-178 (238)
330 KOG0309|consensus 93.7 0.11 2.5E-06 39.1 3.9 63 7-69 161-232 (1081)
331 smart00564 PQQ beta-propeller 93.6 0.28 6.1E-06 21.4 4.0 24 18-41 8-31 (33)
332 PF04841 Vps16_N: Vps16, N-ter 93.5 1.8 4E-05 30.3 10.4 38 5-42 217-254 (410)
333 PF07433 DUF1513: Protein of u 93.5 0.84 1.8E-05 31.0 7.5 40 3-42 215-255 (305)
334 KOG1916|consensus 93.3 0.26 5.6E-06 38.1 5.3 64 11-74 242-328 (1283)
335 KOG1275|consensus 92.9 0.63 1.4E-05 36.0 6.8 69 17-85 148-221 (1118)
336 PRK04043 tolB translocation pr 92.7 2.4 5.3E-05 29.8 9.2 33 10-43 324-365 (419)
337 KOG3621|consensus 92.7 0.31 6.6E-06 36.3 4.8 65 5-70 34-107 (726)
338 PF01011 PQQ: PQQ enzyme repea 92.7 0.41 8.9E-06 21.9 3.8 25 19-43 3-27 (38)
339 COG5354 Uncharacterized protei 92.7 2.2 4.7E-05 31.0 8.8 71 3-74 273-353 (561)
340 TIGR03074 PQQ_membr_DH membran 92.4 1.7 3.7E-05 33.0 8.6 62 16-77 260-352 (764)
341 COG5170 CDC55 Serine/threonine 92.4 0.43 9.2E-06 32.9 4.9 63 5-68 281-366 (460)
342 KOG4460|consensus 92.3 1.7 3.7E-05 32.0 8.1 69 5-73 104-202 (741)
343 cd00216 PQQ_DH Dehydrogenases 92.2 1.5 3.3E-05 31.3 7.8 61 17-77 111-191 (488)
344 PF08450 SGL: SMP-30/Gluconola 92.1 2 4.4E-05 27.4 9.8 70 7-77 136-220 (246)
345 cd00216 PQQ_DH Dehydrogenases 92.1 1.9 4.1E-05 30.8 8.2 63 16-78 61-137 (488)
346 TIGR02276 beta_rpt_yvtn 40-res 92.1 0.61 1.3E-05 21.3 5.2 30 14-43 1-31 (42)
347 PF11715 Nup160: Nucleoporin N 91.8 0.82 1.8E-05 32.8 6.2 34 7-40 217-254 (547)
348 KOG2079|consensus 91.5 0.27 5.9E-06 38.3 3.6 63 15-78 98-169 (1206)
349 PF01011 PQQ: PQQ enzyme repea 91.4 0.48 1E-05 21.7 3.2 27 53-79 2-28 (38)
350 PF14783 BBS2_Mid: Ciliary BBS 90.9 2 4.4E-05 24.9 8.0 59 3-65 41-110 (111)
351 KOG1645|consensus 90.9 0.53 1.1E-05 33.2 4.2 32 5-36 236-268 (463)
352 PF14269 Arylsulfotran_2: Aryl 90.7 2.5 5.5E-05 28.4 7.3 62 7-68 146-219 (299)
353 TIGR03075 PQQ_enz_alc_DH PQQ-d 90.4 3.3 7.2E-05 30.0 8.1 61 17-77 121-197 (527)
354 COG3204 Uncharacterized protei 90.2 4.1 8.9E-05 27.8 7.8 68 4-71 85-160 (316)
355 KOG0882|consensus 90.2 0.66 1.4E-05 33.2 4.3 75 3-77 143-239 (558)
356 KOG2041|consensus 90.1 1 2.2E-05 34.3 5.4 68 2-69 69-145 (1189)
357 PF06433 Me-amine-dh_H: Methyl 89.9 1.8 3.9E-05 29.9 6.1 52 27-78 270-329 (342)
358 PF14779 BBS1: Ciliary BBSome 89.9 4.2 9.2E-05 27.0 7.7 27 17-43 196-222 (257)
359 PF08553 VID27: VID27 cytoplas 89.8 1.7 3.6E-05 33.3 6.3 51 18-69 544-606 (794)
360 PF06977 SdiA-regulated: SdiA- 89.6 4.3 9.3E-05 26.7 8.6 65 4-69 21-94 (248)
361 KOG2247|consensus 89.5 0.13 2.9E-06 37.0 0.5 60 9-68 122-187 (615)
362 COG3386 Gluconolactonase [Carb 89.4 5.1 0.00011 27.2 9.1 69 8-77 166-250 (307)
363 KOG4649|consensus 89.2 5.2 0.00011 27.1 7.8 63 14-77 20-89 (354)
364 PF02897 Peptidase_S9_N: Proly 89.1 1.9 4.2E-05 29.7 6.0 34 7-40 126-164 (414)
365 PF06433 Me-amine-dh_H: Methyl 89.0 0.72 1.6E-05 31.8 3.7 40 5-44 289-330 (342)
366 KOG2114|consensus 88.5 5.2 0.00011 30.9 8.0 76 4-81 171-256 (933)
367 TIGR03054 photo_alph_chp1 puta 88.5 3.8 8.2E-05 24.6 7.7 60 18-77 43-121 (135)
368 PF01436 NHL: NHL repeat; Int 88.4 1.2 2.7E-05 19.0 4.1 25 7-31 4-28 (28)
369 KOG4499|consensus 88.2 4.6 0.0001 26.9 6.8 77 8-84 161-256 (310)
370 KOG2103|consensus 87.7 7.9 0.00017 29.9 8.5 77 6-82 37-116 (910)
371 PHA02713 hypothetical protein; 87.5 1.4 3E-05 32.1 4.6 69 15-83 463-547 (557)
372 PF04053 Coatomer_WDAD: Coatom 87.2 5.4 0.00012 28.5 7.3 28 7-35 35-62 (443)
373 KOG2395|consensus 86.9 2.3 5.1E-05 31.2 5.3 60 7-68 433-499 (644)
374 COG2706 3-carboxymuconate cycl 86.7 8.5 0.00018 26.7 8.6 38 6-43 192-231 (346)
375 PF00780 CNH: CNH domain; Int 86.7 4.1 9E-05 26.3 6.1 54 14-71 5-66 (275)
376 PF13570 PQQ_3: PQQ-like domai 86.6 1.8 3.9E-05 19.8 3.3 21 15-35 20-40 (40)
377 PF12657 TFIIIC_delta: Transcr 86.5 1.8 3.9E-05 26.6 4.1 30 6-35 87-122 (173)
378 PF14655 RAB3GAP2_N: Rab3 GTPa 86.0 5.6 0.00012 28.2 6.8 65 9-74 6-101 (415)
379 TIGR03074 PQQ_membr_DH membran 85.9 12 0.00026 28.7 8.8 62 16-77 194-286 (764)
380 PF14781 BBS2_N: Ciliary BBSom 85.7 5.8 0.00013 23.9 7.3 63 9-73 3-85 (136)
381 PF07569 Hira: TUP1-like enhan 85.4 1.5 3.3E-05 28.2 3.5 24 52-75 23-46 (219)
382 PF08450 SGL: SMP-30/Gluconola 85.1 7.7 0.00017 24.7 10.1 69 8-77 3-76 (246)
383 KOG4499|consensus 84.9 7.5 0.00016 26.0 6.5 42 10-51 217-258 (310)
384 PF00930 DPPIV_N: Dipeptidyl p 84.9 3.7 8.1E-05 27.9 5.4 62 13-75 1-77 (353)
385 COG0823 TolB Periplasmic compo 84.7 3.5 7.5E-05 29.2 5.3 62 9-72 242-317 (425)
386 PF00780 CNH: CNH domain; Int 84.1 9 0.0002 24.7 9.8 28 52-80 239-266 (275)
387 PF10282 Lactonase: Lactonase, 83.7 11 0.00024 25.5 8.6 69 7-75 39-124 (345)
388 PF08728 CRT10: CRT10; InterP 83.6 6.7 0.00014 29.8 6.5 65 4-68 163-245 (717)
389 KOG2727|consensus 83.5 1.1 2.5E-05 34.8 2.6 71 7-77 324-414 (1244)
390 KOG2247|consensus 82.8 0.13 2.8E-06 37.1 -2.3 81 4-84 74-162 (615)
391 PRK10115 protease 2; Provision 82.1 19 0.00042 27.1 8.6 32 7-38 129-165 (686)
392 PHA03098 kelch-like protein; P 82.0 12 0.00027 26.7 7.3 74 14-88 436-529 (534)
393 PF00930 DPPIV_N: Dipeptidyl p 81.4 3.7 8E-05 27.9 4.3 32 6-38 44-75 (353)
394 COG1520 FOG: WD40-like repeat 81.3 15 0.00032 25.1 7.9 61 15-76 111-178 (370)
395 PF01731 Arylesterase: Arylest 80.5 5.6 0.00012 21.9 4.1 27 8-34 57-84 (86)
396 PF15390 DUF4613: Domain of un 80.5 4.2 9.2E-05 30.3 4.5 35 2-36 153-188 (671)
397 KOG3616|consensus 80.3 6 0.00013 30.8 5.3 62 7-68 17-82 (1636)
398 TIGR02608 delta_60_rpt delta-6 79.5 4.6 9.9E-05 20.4 3.3 20 5-24 1-20 (55)
399 PRK13616 lipoprotein LpqB; Pro 78.8 3.6 7.8E-05 30.4 3.8 26 4-30 447-472 (591)
400 KOG1920|consensus 78.5 5.1 0.00011 32.1 4.6 29 5-33 110-138 (1265)
401 PF12768 Rax2: Cortical protei 78.4 16 0.00035 24.5 6.5 53 24-76 14-79 (281)
402 PF07995 GSDH: Glucose / Sorbo 77.3 9 0.00019 26.0 5.2 30 6-37 3-32 (331)
403 PF10168 Nup88: Nuclear pore c 77.3 9.5 0.00021 29.0 5.6 32 5-36 147-181 (717)
404 PRK02888 nitrous-oxide reducta 76.7 28 0.0006 26.3 7.7 47 25-71 295-353 (635)
405 PF04762 IKI3: IKI3 family; I 75.5 27 0.00059 27.4 7.7 62 5-67 76-148 (928)
406 PF04053 Coatomer_WDAD: Coatom 75.3 23 0.00049 25.4 6.9 71 7-79 71-144 (443)
407 COG0823 TolB Periplasmic compo 74.8 28 0.0006 24.8 8.5 63 9-72 286-361 (425)
408 KOG2377|consensus 74.0 9.2 0.0002 28.0 4.6 32 2-33 64-95 (657)
409 KOG3630|consensus 73.8 6.6 0.00014 31.5 4.1 32 4-35 198-229 (1405)
410 PF12341 DUF3639: Protein of u 73.4 6.5 0.00014 16.9 3.7 24 6-31 3-26 (27)
411 PF15390 DUF4613: Domain of un 73.3 20 0.00043 27.0 6.2 62 8-70 116-187 (671)
412 KOG1920|consensus 71.9 39 0.00084 27.5 7.7 60 5-65 69-135 (1265)
413 PF10214 Rrn6: RNA polymerase 71.8 27 0.00059 26.6 6.9 28 6-33 147-175 (765)
414 PF10647 Gmad1: Lipoprotein Lp 71.5 11 0.00023 24.6 4.3 28 6-33 113-143 (253)
415 PF14583 Pectate_lyase22: Olig 71.2 34 0.00073 24.2 7.8 64 10-74 41-115 (386)
416 COG1520 FOG: WD40-like repeat 71.0 30 0.00065 23.6 7.6 60 18-77 70-137 (370)
417 COG3391 Uncharacterized conser 70.0 34 0.00073 23.7 9.1 68 7-74 118-195 (381)
418 TIGR03118 PEPCTERM_chp_1 conse 69.5 35 0.00075 23.7 7.6 28 7-34 25-52 (336)
419 PF07433 DUF1513: Protein of u 68.0 36 0.00078 23.3 10.4 75 3-77 3-94 (305)
420 PF04841 Vps16_N: Vps16, N-ter 67.7 40 0.00087 23.7 9.4 59 10-70 34-110 (410)
421 PF14781 BBS2_N: Ciliary BBSom 67.6 25 0.00053 21.2 7.0 71 4-76 47-132 (136)
422 PF03178 CPSF_A: CPSF A subuni 67.6 34 0.00073 22.8 6.5 71 4-77 88-166 (321)
423 KOG1832|consensus 66.6 9.9 0.00021 30.1 3.7 44 41-84 1096-1146(1516)
424 PF06977 SdiA-regulated: SdiA- 65.5 18 0.0004 23.8 4.5 35 6-41 172-207 (248)
425 PF10584 Proteasome_A_N: Prote 65.0 1.2 2.6E-05 18.5 -0.7 8 11-18 7-14 (23)
426 TIGR03606 non_repeat_PQQ dehyd 64.4 19 0.00041 26.0 4.6 31 6-36 31-61 (454)
427 TIGR02171 Fb_sc_TIGR02171 Fibr 63.1 26 0.00056 27.5 5.3 33 3-35 348-386 (912)
428 PF05096 Glu_cyclase_2: Glutam 62.9 44 0.00094 22.4 7.7 61 17-77 101-165 (264)
429 PF06739 SBBP: Beta-propeller 61.7 15 0.00033 16.8 3.5 22 5-26 13-34 (38)
430 PF12234 Rav1p_C: RAVE protein 60.6 72 0.0016 24.2 8.2 62 7-68 32-103 (631)
431 PF07995 GSDH: Glucose / Sorbo 60.5 19 0.0004 24.5 3.9 24 6-29 307-330 (331)
432 KOG4460|consensus 60.3 31 0.00068 25.8 5.1 33 7-39 168-203 (741)
433 PHA02713 hypothetical protein; 59.9 67 0.0015 23.6 8.0 62 14-75 350-446 (557)
434 KOG1916|consensus 59.4 8.7 0.00019 30.3 2.3 65 9-74 188-271 (1283)
435 PF10411 DsbC_N: Disulfide bon 59.1 10 0.00022 19.0 1.9 29 6-34 13-41 (57)
436 KOG2467|consensus 58.7 8.6 0.00019 27.3 2.0 19 52-70 342-360 (477)
437 KOG4441|consensus 58.5 41 0.00088 24.9 5.5 59 15-74 332-409 (571)
438 PHA02790 Kelch-like protein; P 56.9 58 0.0013 23.3 6.0 57 14-73 406-474 (480)
439 PF12566 DUF3748: Protein of u 56.4 11 0.00023 22.2 1.9 22 11-32 74-95 (122)
440 PF05694 SBP56: 56kDa selenium 56.1 27 0.00058 25.3 4.1 29 7-35 314-343 (461)
441 PF02870 Methyltransf_1N: 6-O- 55.6 13 0.00028 19.4 2.1 27 9-35 5-31 (77)
442 KOG1008|consensus 54.8 3.1 6.6E-05 31.3 -0.6 61 7-68 157-224 (783)
443 TIGR03118 PEPCTERM_chp_1 conse 54.8 70 0.0015 22.2 7.7 71 7-79 203-289 (336)
444 KOG4441|consensus 53.9 82 0.0018 23.4 6.5 61 15-75 284-363 (571)
445 KOG1898|consensus 53.4 1.2E+02 0.0027 24.7 8.2 60 16-75 549-624 (1205)
446 PF05096 Glu_cyclase_2: Glutam 52.7 69 0.0015 21.5 9.5 71 7-77 47-126 (264)
447 PF08801 Nucleoporin_N: Nup133 51.8 29 0.00063 24.2 3.8 30 6-35 191-220 (422)
448 KOG2280|consensus 49.9 74 0.0016 24.8 5.7 61 5-68 217-279 (829)
449 PF11635 Med16: Mediator compl 49.4 45 0.00098 25.5 4.7 39 4-42 259-297 (753)
450 PF10395 Utp8: Utp8 family; I 49.1 41 0.00089 25.6 4.3 31 3-33 128-158 (670)
451 COG4831 Roadblock/LC7 domain [ 48.4 22 0.00048 20.2 2.3 19 3-21 11-29 (109)
452 smart00036 CNH Domain found in 47.3 85 0.0019 21.1 6.8 52 15-69 12-73 (302)
453 KOG0088|consensus 47.0 28 0.0006 22.0 2.8 45 18-71 54-98 (218)
454 COG5167 VID27 Protein involved 46.6 63 0.0014 24.3 4.8 18 52-69 574-591 (776)
455 PF15525 DUF4652: Domain of un 45.3 82 0.0018 20.3 5.8 56 26-81 88-160 (200)
456 PRK10526 acyl-CoA thioesterase 44.9 22 0.00047 23.7 2.3 8 29-37 264-271 (286)
457 PF03178 CPSF_A: CPSF A subuni 44.2 66 0.0014 21.4 4.5 30 5-34 173-202 (321)
458 COG5167 VID27 Protein involved 43.6 63 0.0014 24.3 4.5 53 17-69 574-632 (776)
459 PF03088 Str_synth: Strictosid 43.4 39 0.00085 18.7 2.8 16 7-22 59-74 (89)
460 smart00706 TECPR Beta propelle 43.4 32 0.00069 15.0 4.0 27 4-31 7-33 (35)
461 smart00415 HSF heat shock fact 42.7 27 0.00059 19.6 2.2 14 9-22 21-34 (105)
462 KOG1900|consensus 41.7 99 0.0022 25.6 5.5 62 6-70 180-273 (1311)
463 KOG1983|consensus 40.8 52 0.0011 26.2 4.0 33 4-36 35-67 (993)
464 KOG1983|consensus 40.8 88 0.0019 25.0 5.2 22 52-73 247-268 (993)
465 PF09142 TruB_C: tRNA Pseudour 39.8 34 0.00074 17.1 2.0 14 9-22 29-42 (56)
466 PF09941 DUF2173: Uncharacteri 39.6 49 0.0011 19.1 2.9 21 1-21 7-27 (108)
467 COG5169 HSF1 Heat shock transc 39.4 28 0.0006 23.6 2.1 13 9-21 29-41 (282)
468 KOG0084|consensus 38.7 16 0.00035 23.5 0.9 34 27-69 59-92 (205)
469 COG3386 Gluconolactonase [Carb 37.8 1.3E+02 0.0028 20.5 6.2 36 9-45 217-253 (307)
470 KOG0080|consensus 37.7 27 0.00059 22.0 1.7 43 18-69 52-94 (209)
471 PF05907 DUF866: Eukaryotic pr 36.9 96 0.0021 19.1 4.1 30 7-36 105-135 (161)
472 PF14727 PHTB1_N: PTHB1 N-term 36.7 1.6E+02 0.0035 21.1 6.6 52 17-68 146-203 (418)
473 PF05935 Arylsulfotrans: Aryls 36.5 1.5E+02 0.0033 21.4 5.5 40 7-46 273-313 (477)
474 PF08309 LVIVD: LVIVD repeat; 36.4 52 0.0011 15.4 3.5 21 15-35 10-30 (42)
475 PF15644 Tox-PL: Papain fold t 35.7 63 0.0014 18.3 3.0 22 16-37 88-109 (111)
476 KOG2467|consensus 35.6 37 0.0008 24.3 2.3 21 15-35 340-360 (477)
477 PF07865 DUF1652: Protein of u 34.9 74 0.0016 16.8 3.4 15 27-41 28-42 (69)
478 PF08149 BING4CT: BING4CT (NUC 34.8 82 0.0018 17.2 3.6 34 4-37 9-42 (80)
479 PF00447 HSF_DNA-bind: HSF-typ 34.7 32 0.00069 19.2 1.6 13 9-21 18-30 (103)
480 PF13964 Kelch_6: Kelch motif 34.5 56 0.0012 15.2 2.5 15 61-75 28-42 (50)
481 COG2706 3-carboxymuconate cycl 34.4 1.6E+02 0.0036 20.6 9.1 67 6-73 245-327 (346)
482 PF09826 Beta_propel: Beta pro 34.1 1.9E+02 0.0042 21.3 6.8 19 15-34 21-39 (521)
483 PF01344 Kelch_1: Kelch motif; 33.8 54 0.0012 14.9 3.4 12 62-73 29-40 (47)
484 PF13418 Kelch_4: Galactose ox 33.6 57 0.0012 15.0 2.5 11 63-73 31-41 (49)
485 COG4993 Gcd Glucose dehydrogen 33.1 1E+02 0.0022 23.7 4.2 37 4-40 455-494 (773)
486 PF03736 EPTP: EPTP domain; I 32.7 60 0.0013 15.1 3.7 22 11-32 19-43 (44)
487 COG4993 Gcd Glucose dehydrogen 32.2 2.4E+02 0.0052 21.8 6.0 58 18-75 645-724 (773)
488 KOG4305|consensus 31.1 2.9E+02 0.0063 22.5 9.3 29 52-81 963-991 (1029)
489 COG5104 PRP40 Splicing factor 30.5 20 0.00044 26.0 0.4 59 22-82 21-87 (590)
490 PF09631 Sen15: Sen15 protein; 29.7 54 0.0012 18.3 2.0 20 18-37 76-95 (101)
491 COG3211 PhoX Predicted phospha 29.5 63 0.0014 24.3 2.7 19 4-22 553-571 (616)
492 PF14870 PSII_BNR: Photosynthe 28.4 2E+02 0.0043 19.6 7.8 29 5-33 145-173 (302)
493 PF10433 MMS1_N: Mono-function 28.2 1.4E+02 0.0031 21.4 4.3 30 6-35 45-74 (504)
494 KOG4305|consensus 26.9 2.5E+02 0.0055 22.8 5.6 25 24-48 969-993 (1029)
495 PF02974 Inh: Protease inhibit 26.5 97 0.0021 17.2 2.7 21 11-31 56-76 (99)
496 PF12768 Rax2: Cortical protei 26.1 2.1E+02 0.0046 19.3 8.1 35 3-37 35-75 (281)
497 PLN02193 nitrile-specifier pro 25.9 2.5E+02 0.0055 20.1 8.0 60 15-75 328-416 (470)
498 KOG1897|consensus 25.7 3.7E+02 0.0081 22.0 8.7 65 5-69 531-613 (1096)
499 PF11090 DUF2833: Protein of u 25.7 75 0.0016 17.6 2.0 28 9-37 2-29 (86)
500 KOG4659|consensus 25.6 2.8E+02 0.0061 23.7 5.6 63 8-70 596-682 (1899)
No 1
>KOG0271|consensus
Probab=99.83 E-value=2.4e-20 Score=125.02 Aligned_cols=86 Identities=20% Similarity=0.348 Sum_probs=78.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEe-eEecCCcceeec------------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRV-PVLGKHTNTIVG------------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~-~~~~~h~~~i~~------------~~las~s~d~~v~iwd~ 68 (89)
+|..+|.|++|||||+.||+|+.||+|++||..+|+++ +.+.+|+..|.+ .+||++|.||+++|||+
T Consensus 155 gH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~ 234 (480)
T KOG0271|consen 155 GHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDT 234 (480)
T ss_pred CCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEc
Confidence 57889999999999999999999999999999887765 578899999987 79999999999999999
Q ss_pred CCCEEEeeeCCCCCCCcCC
Q psy12376 69 MTSKRVPVLGKHTKSKPST 87 (89)
Q Consensus 69 ~~~~~~~~l~~h~~~~~~~ 87 (89)
..+.++..+-+|+.++.+.
T Consensus 235 ~~~~~~~~lsgHT~~VTCv 253 (480)
T KOG0271|consen 235 KLGTCVRTLSGHTASVTCV 253 (480)
T ss_pred cCceEEEEeccCccceEEE
Confidence 9999999999999987653
No 2
>KOG0266|consensus
Probab=99.73 E-value=5.4e-17 Score=112.48 Aligned_cols=84 Identities=17% Similarity=0.252 Sum_probs=78.3
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeC-CCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNH-MTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~-~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|...|..++|+|||+++++++.|+++++||+ ..++.++.+.+|...|.+ +++++|+.|++|+|||+++++.
T Consensus 201 ~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~ 280 (456)
T KOG0266|consen 201 GHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGEC 280 (456)
T ss_pred ccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeE
Confidence 46778999999999999999999999999999 566889999999999887 7999999999999999999999
Q ss_pred EeeeCCCCCCCc
Q psy12376 74 VPVLGKHTKSKP 85 (89)
Q Consensus 74 ~~~l~~h~~~~~ 85 (89)
...+.+|+..++
T Consensus 281 ~~~l~~hs~~is 292 (456)
T KOG0266|consen 281 VRKLKGHSDGIS 292 (456)
T ss_pred EEeeeccCCceE
Confidence 999999998876
No 3
>KOG0272|consensus
Probab=99.73 E-value=1.1e-17 Score=113.02 Aligned_cols=86 Identities=16% Similarity=0.164 Sum_probs=79.3
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|.++|..++|||+|.+||+|+.|++++|||.+..+.+..+.+|...|.. .+|+|||.|++++||..++.+.
T Consensus 343 gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~ 422 (459)
T KOG0272|consen 343 GHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSP 422 (459)
T ss_pred ccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCccc
Confidence 57889999999999999999999999999999988888889999886653 7999999999999999999999
Q ss_pred EeeeCCCCCCCcCC
Q psy12376 74 VPVLGKHTKSKPST 87 (89)
Q Consensus 74 ~~~l~~h~~~~~~~ 87 (89)
++.|.+|..+|.|.
T Consensus 423 ~ksLaGHe~kV~s~ 436 (459)
T KOG0272|consen 423 LKSLAGHEGKVISL 436 (459)
T ss_pred chhhcCCccceEEE
Confidence 99999999998764
No 4
>KOG0263|consensus
Probab=99.71 E-value=1.7e-17 Score=117.88 Aligned_cols=85 Identities=16% Similarity=0.220 Sum_probs=79.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|-..+.|++|+|+..++|+|+.|.+|++||+.+|..++.+.||+++|.+ .+||+|+.|+.|.|||+.++..+
T Consensus 533 ghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v 612 (707)
T KOG0263|consen 533 GHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLV 612 (707)
T ss_pred ccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcch
Confidence 56677999999999999999999999999999999999999999999987 89999999999999999999999
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
..+.+|++.+-|
T Consensus 613 ~~l~~Ht~ti~S 624 (707)
T KOG0263|consen 613 KQLKGHTGTIYS 624 (707)
T ss_pred hhhhcccCceeE
Confidence 999999776544
No 5
>KOG0266|consensus
Probab=99.68 E-value=4.3e-16 Score=108.01 Aligned_cols=83 Identities=22% Similarity=0.343 Sum_probs=75.8
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCE-
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSK- 72 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~- 72 (89)
++|...+++++|+|+|+.+++|+.|++|++||++++++++.+.+|...|.+ .+|++++.|+.|+|||+.++.
T Consensus 243 ~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 243 KGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSK 322 (456)
T ss_pred cCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCce
Confidence 378889999999999999999999999999999999999999999999886 899999999999999999888
Q ss_pred -EEeeeCCCCCC
Q psy12376 73 -RVPVLGKHTKS 83 (89)
Q Consensus 73 -~~~~l~~h~~~ 83 (89)
+...+.++...
T Consensus 323 ~~~~~~~~~~~~ 334 (456)
T KOG0266|consen 323 LCLKLLSGAENS 334 (456)
T ss_pred eeeecccCCCCC
Confidence 56777777665
No 6
>KOG0271|consensus
Probab=99.68 E-value=1.4e-16 Score=107.08 Aligned_cols=84 Identities=17% Similarity=0.207 Sum_probs=77.6
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
++|..-|..+.||||++++|+++=|..|++||.++|+.+..+.+|-.+|.- ++|+|||.|.++.+|++++.+.
T Consensus 364 tgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl 443 (480)
T KOG0271|consen 364 TGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKL 443 (480)
T ss_pred hchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeee
Confidence 467788999999999999999999999999999999999999999887764 7999999999999999999999
Q ss_pred EeeeCCCCCCC
Q psy12376 74 VPVLGKHTKSK 84 (89)
Q Consensus 74 ~~~l~~h~~~~ 84 (89)
..-|.+|...+
T Consensus 444 ~~DLpGh~DEV 454 (480)
T KOG0271|consen 444 KQDLPGHADEV 454 (480)
T ss_pred cccCCCCCceE
Confidence 89999998764
No 7
>KOG0272|consensus
Probab=99.68 E-value=1.4e-16 Score=107.70 Aligned_cols=84 Identities=17% Similarity=0.202 Sum_probs=78.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...|.+++|.|||..+++|+-|..-+|||+++|+++-.+.+|.++|.. ..|||||.|++++|||++.....
T Consensus 301 GHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~l 380 (459)
T KOG0272|consen 301 GHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSEL 380 (459)
T ss_pred ccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccc
Confidence 57788999999999999999999999999999999999999999999887 68999999999999999988888
Q ss_pred eeeCCCCCCCc
Q psy12376 75 PVLGKHTKSKP 85 (89)
Q Consensus 75 ~~l~~h~~~~~ 85 (89)
..+.+|++-|+
T Consensus 381 y~ipAH~nlVS 391 (459)
T KOG0272|consen 381 YTIPAHSNLVS 391 (459)
T ss_pred eecccccchhh
Confidence 89999998765
No 8
>PTZ00421 coronin; Provisional
Probab=99.66 E-value=2e-15 Score=105.64 Aligned_cols=85 Identities=20% Similarity=0.131 Sum_probs=73.4
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCC-------eEeeEecCCcceeec--------cEEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTS-------KRVPVLGKHTNTIVG--------QVLAIGTARGNLTV 65 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~-------~~~~~~~~h~~~i~~--------~~las~s~d~~v~i 65 (89)
+|.+.|++++|+| ++++||+|+.||+|++||+.++ +.+..+.+|...|.+ ++|++|+.|++|+|
T Consensus 73 GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrI 152 (493)
T PTZ00421 73 GQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNV 152 (493)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEE
Confidence 5778899999999 8899999999999999998764 245678899888876 58999999999999
Q ss_pred EeCCCCEEEeeeCCCCCCCcC
Q psy12376 66 YNHMTSKRVPVLGKHTKSKPS 86 (89)
Q Consensus 66 wd~~~~~~~~~l~~h~~~~~~ 86 (89)
||+++++....+..|...+.+
T Consensus 153 WDl~tg~~~~~l~~h~~~V~s 173 (493)
T PTZ00421 153 WDVERGKAVEVIKCHSDQITS 173 (493)
T ss_pred EECCCCeEEEEEcCCCCceEE
Confidence 999999888888888876543
No 9
>KOG0285|consensus
Probab=99.63 E-value=2.9e-15 Score=100.32 Aligned_cols=86 Identities=21% Similarity=0.262 Sum_probs=72.5
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCccee--------------------------------
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTI-------------------------------- 49 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i-------------------------------- 49 (89)
+|.++|.|+++.|-.++|++|+.|+++.|||+.+|+....+.+|...+
T Consensus 149 gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvI 228 (460)
T KOG0285|consen 149 GHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVI 228 (460)
T ss_pred hccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhH
Confidence 577899999999999999999999999999999998766665554322
Q ss_pred ----------ec-------cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCCCCcCC
Q psy12376 50 ----------VG-------QVLAIGTARGNLTVYNHMTSKRVPVLGKHTKSKPST 87 (89)
Q Consensus 50 ----------~~-------~~las~s~d~~v~iwd~~~~~~~~~l~~h~~~~~~~ 87 (89)
.| ..|++|+.|.+++|||+++...+..|.+|...+.++
T Consensus 229 R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V 283 (460)
T KOG0285|consen 229 RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASV 283 (460)
T ss_pred HHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeE
Confidence 22 678999999999999999999999999999887654
No 10
>PTZ00421 coronin; Provisional
Probab=99.62 E-value=1.1e-14 Score=102.06 Aligned_cols=82 Identities=17% Similarity=0.202 Sum_probs=73.3
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|...|.+++|+|++ .+|++++.|+.|+|||+.+++.+..+.+|...|.+ ++|++++.|+.|+|||+++++.
T Consensus 123 gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~ 202 (493)
T PTZ00421 123 GHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTI 202 (493)
T ss_pred CCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcE
Confidence 467789999999986 69999999999999999999988889999988876 7899999999999999999988
Q ss_pred EeeeCCCCCC
Q psy12376 74 VPVLGKHTKS 83 (89)
Q Consensus 74 ~~~l~~h~~~ 83 (89)
+..+.+|...
T Consensus 203 v~tl~~H~~~ 212 (493)
T PTZ00421 203 VSSVEAHASA 212 (493)
T ss_pred EEEEecCCCC
Confidence 8888888754
No 11
>KOG0319|consensus
Probab=99.59 E-value=6.5e-15 Score=104.80 Aligned_cols=83 Identities=17% Similarity=0.203 Sum_probs=77.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|+..++++.|+|..+.+|+++.|++|+||.+.++.++..+.||...|.- ++|+||+.||-++|||++++.++
T Consensus 503 GH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~ 582 (775)
T KOG0319|consen 503 GHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECE 582 (775)
T ss_pred CCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhh
Confidence 68888999999999999999999999999999999999999999886543 89999999999999999999999
Q ss_pred eeeCCCCCCC
Q psy12376 75 PVLGKHTKSK 84 (89)
Q Consensus 75 ~~l~~h~~~~ 84 (89)
..+..|.+++
T Consensus 583 ~tlD~H~Drv 592 (775)
T KOG0319|consen 583 MTLDAHNDRV 592 (775)
T ss_pred hhhhhcccee
Confidence 9999999874
No 12
>KOG0263|consensus
Probab=99.58 E-value=4e-15 Score=105.95 Aligned_cols=85 Identities=12% Similarity=0.193 Sum_probs=79.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|..+|+.++|+|-|-+||+++.|++.++|.....+.++.+.+|.+-+.| +|+|+||.|.+|++||+.+|..+
T Consensus 491 GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~V 570 (707)
T KOG0263|consen 491 GHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSV 570 (707)
T ss_pred CCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEE
Confidence 57789999999999999999999999999999988899999999998887 89999999999999999999999
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
..+-+|..++.+
T Consensus 571 RiF~GH~~~V~a 582 (707)
T KOG0263|consen 571 RIFTGHKGPVTA 582 (707)
T ss_pred EEecCCCCceEE
Confidence 999999988754
No 13
>KOG0265|consensus
Probab=99.58 E-value=2.1e-14 Score=94.16 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=75.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|++.|+.+.|+|+|.+||+|+.|..|.+|+... -+-...+.+|++.|.. +.++++|.|.+|+.||.++|++
T Consensus 45 gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~ 124 (338)
T KOG0265|consen 45 GHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKR 124 (338)
T ss_pred CCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEeccccee
Confidence 5788899999999999999999999999999764 2334567799999887 8999999999999999999999
Q ss_pred EeeeCCCCCCCcCC
Q psy12376 74 VPVLGKHTKSKPST 87 (89)
Q Consensus 74 ~~~l~~h~~~~~~~ 87 (89)
...+..|.+=+++.
T Consensus 125 ~rk~k~h~~~vNs~ 138 (338)
T KOG0265|consen 125 IRKHKGHTSFVNSL 138 (338)
T ss_pred eehhccccceeeec
Confidence 99999998776654
No 14
>KOG0273|consensus
Probab=99.58 E-value=1.1e-14 Score=99.84 Aligned_cols=87 Identities=20% Similarity=0.227 Sum_probs=78.1
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec----------------cEEEEEeCCCCEE
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG----------------QVLAIGTARGNLT 64 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~----------------~~las~s~d~~v~ 64 (89)
++|..+|.++.|.|.|..|+++++|++++||++........+++|...|.. ..+++++.|++|+
T Consensus 356 ~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~ 435 (524)
T KOG0273|consen 356 IGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVK 435 (524)
T ss_pred ecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEE
Confidence 468899999999999999999999999999999888888889999854443 6899999999999
Q ss_pred EEeCCCCEEEeeeCCCCCCCcCC
Q psy12376 65 VYNHMTSKRVPVLGKHTKSKPST 87 (89)
Q Consensus 65 iwd~~~~~~~~~l~~h~~~~~~~ 87 (89)
+||+..+..++.+-+|+.+|.+.
T Consensus 436 lwdv~~gv~i~~f~kH~~pVysv 458 (524)
T KOG0273|consen 436 LWDVESGVPIHTLMKHQEPVYSV 458 (524)
T ss_pred EEEccCCceeEeeccCCCceEEE
Confidence 99999999999999999987653
No 15
>KOG0286|consensus
Probab=99.57 E-value=3.5e-14 Score=92.96 Aligned_cols=86 Identities=12% Similarity=0.173 Sum_probs=79.0
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~ 72 (89)
++|+..++|+.|-+| .+|++++.|.+..+||+.+|+.+..+.+|.+-|.+ +.|++|+.|++.+|||++.+.
T Consensus 142 ~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~ 220 (343)
T KOG0286|consen 142 AGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQ 220 (343)
T ss_pred cCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcc
Confidence 368888999999986 58899999999999999999999999999998776 899999999999999999999
Q ss_pred EEeeeCCCCCCCcCC
Q psy12376 73 RVPVLGKHTKSKPST 87 (89)
Q Consensus 73 ~~~~l~~h~~~~~~~ 87 (89)
..+.+.+|...++++
T Consensus 221 c~qtF~ghesDINsv 235 (343)
T KOG0286|consen 221 CVQTFEGHESDINSV 235 (343)
T ss_pred eeEeecccccccceE
Confidence 999999999888764
No 16
>KOG0295|consensus
Probab=99.55 E-value=6.8e-14 Score=93.58 Aligned_cols=84 Identities=17% Similarity=0.173 Sum_probs=74.2
Q ss_pred CcCCcEEEEEEccC---------------CCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeC
Q psy12376 2 NLRYYIFLLQTSQV---------------GQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTA 59 (89)
Q Consensus 2 ~~~~~i~~~~~spd---------------g~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~ 59 (89)
.|..++.|++|-|. |+++++++.|++|++||+.+|+++..+.+|...|+. +||+|+.+
T Consensus 275 ~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaD 354 (406)
T KOG0295|consen 275 EHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCAD 354 (406)
T ss_pred ccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEec
Confidence 35667888888764 258999999999999999999999999999999887 89999999
Q ss_pred CCCEEEEeCCCCEEEeeeCCCCCCCc
Q psy12376 60 RGNLTVYNHMTSKRVPVLGKHTKSKP 85 (89)
Q Consensus 60 d~~v~iwd~~~~~~~~~l~~h~~~~~ 85 (89)
|+++++||++.+++++.+..|+-=+.
T Consensus 355 Dktlrvwdl~~~~cmk~~~ah~hfvt 380 (406)
T KOG0295|consen 355 DKTLRVWDLKNLQCMKTLEAHEHFVT 380 (406)
T ss_pred CCcEEEEEeccceeeeccCCCcceeE
Confidence 99999999999999999998875443
No 17
>KOG0291|consensus
Probab=99.55 E-value=6.5e-14 Score=100.31 Aligned_cols=78 Identities=19% Similarity=0.273 Sum_probs=70.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|-+.++++++||||+++|+|+.||+|+|||.++|-+..++..|+..+.. +.+++.+.||+|+.||+......
T Consensus 348 gH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNf 427 (893)
T KOG0291|consen 348 GHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNF 427 (893)
T ss_pred ccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccccee
Confidence 46678999999999999999999999999999999999999999998876 78999999999999999877766
Q ss_pred eeeCC
Q psy12376 75 PVLGK 79 (89)
Q Consensus 75 ~~l~~ 79 (89)
.++-.
T Consensus 428 RTft~ 432 (893)
T KOG0291|consen 428 RTFTS 432 (893)
T ss_pred eeecC
Confidence 66543
No 18
>KOG0286|consensus
Probab=99.54 E-value=8.1e-14 Score=91.27 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=68.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE-------------------------------------------
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR------------------------------------------- 38 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~------------------------------------------- 38 (89)
+|..+|+++.|++|++.|++++.||.+.|||..+...
T Consensus 53 GH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~ 132 (343)
T KOG0286|consen 53 GHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAE 132 (343)
T ss_pred ccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEeccccccc
Confidence 4667788888888888888888888888888765322
Q ss_pred -----eeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCCCCcC
Q psy12376 39 -----VPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVPVLGKHTKSKPS 86 (89)
Q Consensus 39 -----~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~l~~h~~~~~~ 86 (89)
.+.+.+|.+.+.| ..|+++|.|.+..+||++++++...+.+|+..+.+
T Consensus 133 g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~s 191 (343)
T KOG0286|consen 133 GNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMS 191 (343)
T ss_pred ccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEE
Confidence 2335677777766 78999999999999999999999999999987643
No 19
>KOG0316|consensus
Probab=99.54 E-value=5.6e-14 Score=90.09 Aligned_cols=85 Identities=9% Similarity=0.073 Sum_probs=78.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+++.+|..+.|.-||++.++++.|.+|++|+.-.|..++.+.+|...|.. ..|++|+.|..+.+||+.+|++.
T Consensus 15 ~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~ 94 (307)
T KOG0316|consen 15 CAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVD 94 (307)
T ss_pred ccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeee
Confidence 35678999999999999999999999999999999999999999998886 78999999999999999999999
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
..+++|...++-
T Consensus 95 Rr~rgH~aqVNt 106 (307)
T KOG0316|consen 95 RRFRGHLAQVNT 106 (307)
T ss_pred eecccccceeeE
Confidence 999999988764
No 20
>KOG0319|consensus
Probab=99.54 E-value=4.1e-14 Score=100.82 Aligned_cols=82 Identities=16% Similarity=0.187 Sum_probs=77.4
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
|...|.|++.+|+.+.+|+|+.|.+.+||+..+++....+.+|+..|.| +.+||+|.|++|+||.+.+..+++
T Consensus 462 HdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClk 541 (775)
T KOG0319|consen 462 HDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLK 541 (775)
T ss_pred hcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeee
Confidence 5667999999999999999999999999999999999999999999988 689999999999999999999999
Q ss_pred eeCCCCCCC
Q psy12376 76 VLGKHTKSK 84 (89)
Q Consensus 76 ~l~~h~~~~ 84 (89)
++.+|+..+
T Consensus 542 T~eGH~~aV 550 (775)
T KOG0319|consen 542 TFEGHTSAV 550 (775)
T ss_pred eecCcccee
Confidence 999999765
No 21
>KOG0265|consensus
Probab=99.53 E-value=5.2e-14 Score=92.31 Aligned_cols=76 Identities=14% Similarity=0.209 Sum_probs=69.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|...|..+.|.+|+.++++++.|.+++.||+++|+.++++++|.+.+++ .++.|++.|+++++||++....
T Consensus 88 gHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~ 167 (338)
T KOG0265|consen 88 GHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEA 167 (338)
T ss_pred cccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccch
Confidence 47788999999999999999999999999999999999999999998876 7999999999999999997666
Q ss_pred Eeee
Q psy12376 74 VPVL 77 (89)
Q Consensus 74 ~~~l 77 (89)
++++
T Consensus 168 ~~t~ 171 (338)
T KOG0265|consen 168 IKTF 171 (338)
T ss_pred hhcc
Confidence 5554
No 22
>KOG0315|consensus
Probab=99.52 E-value=1.9e-13 Score=88.16 Aligned_cols=81 Identities=17% Similarity=0.119 Sum_probs=70.4
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC-eEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS-KRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~-~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
|...+..+.+|||+++||+++.|.+++||+..+. +.-..+++|+..+.. .||++|+.|+.+++|++..++.+
T Consensus 214 h~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v 293 (311)
T KOG0315|consen 214 HNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEV 293 (311)
T ss_pred ccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCcee
Confidence 4456899999999999999999999999999886 555677899988765 89999999999999999999888
Q ss_pred eeeCCCCCC
Q psy12376 75 PVLGKHTKS 83 (89)
Q Consensus 75 ~~l~~h~~~ 83 (89)
..-++|-+.
T Consensus 294 ~qy~gh~K~ 302 (311)
T KOG0315|consen 294 RQYQGHHKA 302 (311)
T ss_pred eecCCcccc
Confidence 877777654
No 23
>KOG0281|consensus
Probab=99.52 E-value=8.6e-15 Score=98.03 Aligned_cols=83 Identities=13% Similarity=0.220 Sum_probs=76.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
+|+..|..+.|+ .+++++++.|.+|++|++.+++.++.+.+|+..|-| +++++||.|.+|++||++.|.++..
T Consensus 318 GHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr~rlvVSGSSDntIRlwdi~~G~cLRv 395 (499)
T KOG0281|consen 318 GHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV 395 (499)
T ss_pred hhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehhccCeEEEecCCCceEEEEeccccHHHHH
Confidence 677888999985 469999999999999999999999999999999998 8999999999999999999999999
Q ss_pred eCCCCCCCcC
Q psy12376 77 LGKHTKSKPS 86 (89)
Q Consensus 77 l~~h~~~~~~ 86 (89)
|++|..-+.+
T Consensus 396 LeGHEeLvRc 405 (499)
T KOG0281|consen 396 LEGHEELVRC 405 (499)
T ss_pred HhchHHhhhh
Confidence 9999876543
No 24
>PTZ00420 coronin; Provisional
Probab=99.51 E-value=3.5e-13 Score=95.71 Aligned_cols=82 Identities=7% Similarity=0.097 Sum_probs=68.8
Q ss_pred CcCCcEEEEEEccCCCE-EEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQV-LAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~-la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|...|.+++|+|++.. ||+++.||.|++||+++++.+..+. |...|.+ .+|++++.|+.|+|||+++++.
T Consensus 123 gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~ 201 (568)
T PTZ00420 123 GHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEI 201 (568)
T ss_pred cCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcE
Confidence 36678999999999875 5788999999999999988766664 4455655 7899999999999999999998
Q ss_pred EeeeCCCCCCC
Q psy12376 74 VPVLGKHTKSK 84 (89)
Q Consensus 74 ~~~l~~h~~~~ 84 (89)
...+.+|...+
T Consensus 202 i~tl~gH~g~~ 212 (568)
T PTZ00420 202 ASSFHIHDGGK 212 (568)
T ss_pred EEEEecccCCc
Confidence 88888998654
No 25
>PTZ00420 coronin; Provisional
Probab=99.51 E-value=3.4e-13 Score=95.78 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=63.3
Q ss_pred CcCCcEEEEEEccC-CCEEEEEeCCCcEEEEeCCCCe--------EeeEecCCcceeec--------cEEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQV-GQVLAIGTARGNLTVYNHMTSK--------RVPVLGKHTNTIVG--------QVLAIGTARGNLT 64 (89)
Q Consensus 2 ~~~~~i~~~~~spd-g~~la~g~~~g~v~iwd~~~~~--------~~~~~~~h~~~i~~--------~~las~s~d~~v~ 64 (89)
+|.+.|.+++|+|+ +.+||+|+.||.|++||+.++. .+..+.+|...|.+ .+|++++.|++|+
T Consensus 72 gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIr 151 (568)
T PTZ00420 72 GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVN 151 (568)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEE
Confidence 47788999999997 7899999999999999997542 23456789888876 3578999999999
Q ss_pred EEeCCCCEEEeeeC
Q psy12376 65 VYNHMTSKRVPVLG 78 (89)
Q Consensus 65 iwd~~~~~~~~~l~ 78 (89)
|||+++++....+.
T Consensus 152 IWDl~tg~~~~~i~ 165 (568)
T PTZ00420 152 IWDIENEKRAFQIN 165 (568)
T ss_pred EEECCCCcEEEEEe
Confidence 99999887655543
No 26
>KOG0285|consensus
Probab=99.51 E-value=1.2e-13 Score=92.59 Aligned_cols=85 Identities=21% Similarity=0.290 Sum_probs=76.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|-..|+|++.+|.-..|++|+.|.++++||+++...+..+.+|..+|.. ..+++||.|++|++||++.|+..
T Consensus 233 GHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~ 312 (460)
T KOG0285|consen 233 GHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTM 312 (460)
T ss_pred cccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCcee
Confidence 46677999999999999999999999999999999999999999987765 78999999999999999999988
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
.++-.|.++++.
T Consensus 313 ~tlt~hkksvra 324 (460)
T KOG0285|consen 313 ITLTHHKKSVRA 324 (460)
T ss_pred EeeecccceeeE
Confidence 888887776653
No 27
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.50 E-value=3.7e-13 Score=84.28 Aligned_cols=83 Identities=23% Similarity=0.293 Sum_probs=70.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|+++|++++|+|++++|++++.+|.+.+|+..+++....+..|...+.+ +++++++.|+.|++||+.+++..
T Consensus 7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~ 86 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECV 86 (289)
T ss_pred ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccce
Confidence 47889999999999999999999999999999988777778888777633 58999999999999999887666
Q ss_pred eeeCCCCCCC
Q psy12376 75 PVLGKHTKSK 84 (89)
Q Consensus 75 ~~l~~h~~~~ 84 (89)
..+..|...+
T Consensus 87 ~~~~~~~~~i 96 (289)
T cd00200 87 RTLTGHTSYV 96 (289)
T ss_pred EEEeccCCcE
Confidence 6676666443
No 28
>KOG0302|consensus
Probab=99.50 E-value=4.8e-14 Score=94.78 Aligned_cols=88 Identities=18% Similarity=0.228 Sum_probs=69.8
Q ss_pred CCcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEee--EecCCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 1 MNLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKRVP--VLGKHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~~~--~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
++|...|..|+|||.- ..||+++-||.|+|||+|.+.... ....|.+-|+. .+||+|++||++.|||++.
T Consensus 254 ~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~ 333 (440)
T KOG0302|consen 254 TGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQ 333 (440)
T ss_pred cccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhh
Confidence 4688889999999954 599999999999999999873322 22568776654 7899999999999999975
Q ss_pred ---CEEEeeeCCCCCCCcCCC
Q psy12376 71 ---SKRVPVLGKHTKSKPSTE 88 (89)
Q Consensus 71 ---~~~~~~l~~h~~~~~~~~ 88 (89)
++.+..+..|..++.|.+
T Consensus 334 ~~~~~pVA~fk~Hk~pItsie 354 (440)
T KOG0302|consen 334 FKSGQPVATFKYHKAPITSIE 354 (440)
T ss_pred ccCCCcceeEEeccCCeeEEE
Confidence 455567778888776643
No 29
>KOG0274|consensus
Probab=99.50 E-value=2.4e-13 Score=96.09 Aligned_cols=87 Identities=17% Similarity=0.188 Sum_probs=79.3
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
+|.+.++++++..-+.+|++|+.|.++++||..+|++...+.+|...+.| .++++||.|.+|++|++.++..+++
T Consensus 247 GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l 326 (537)
T KOG0274|consen 247 GHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNL 326 (537)
T ss_pred CCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCcceEEE
Confidence 68889999999887789999999999999999999999999999999888 6788899999999999999999999
Q ss_pred eCCCCCCCcCCC
Q psy12376 77 LGKHTKSKPSTE 88 (89)
Q Consensus 77 l~~h~~~~~~~~ 88 (89)
+.+|...|.+++
T Consensus 327 ~~~h~~~V~~v~ 338 (537)
T KOG0274|consen 327 LRGHTGPVNCVQ 338 (537)
T ss_pred eccccccEEEEE
Confidence 998998887653
No 30
>KOG0279|consensus
Probab=99.50 E-value=1.7e-13 Score=89.18 Aligned_cols=74 Identities=12% Similarity=0.211 Sum_probs=66.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...|+.+..++||+|.++++.|+++++||..+|+..+.|.+|..-|.+ .++++||.|++|.+||+......
T Consensus 61 GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~ 140 (315)
T KOG0279|consen 61 GHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKY 140 (315)
T ss_pred ccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEE
Confidence 46667999999999999999999999999999999999999999998877 79999999999999999865544
Q ss_pred e
Q psy12376 75 P 75 (89)
Q Consensus 75 ~ 75 (89)
.
T Consensus 141 t 141 (315)
T KOG0279|consen 141 T 141 (315)
T ss_pred E
Confidence 4
No 31
>KOG0284|consensus
Probab=99.49 E-value=2.4e-14 Score=96.82 Aligned_cols=83 Identities=14% Similarity=0.171 Sum_probs=75.8
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
...|++++|||....|+++++||.|+|||....+.-+.+.+|..-+.| .++|+||.|+.|.+||.+++.++..
T Consensus 180 ~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~t 259 (464)
T KOG0284|consen 180 AEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLAT 259 (464)
T ss_pred hhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhh
Confidence 367999999998899999999999999999888777888999988887 7999999999999999999999999
Q ss_pred eCCCCCCCcC
Q psy12376 77 LGKHTKSKPS 86 (89)
Q Consensus 77 l~~h~~~~~~ 86 (89)
+-+|...|..
T Consensus 260 lh~HKntVl~ 269 (464)
T KOG0284|consen 260 LHGHKNTVLA 269 (464)
T ss_pred hhhccceEEE
Confidence 9999887654
No 32
>KOG0645|consensus
Probab=99.49 E-value=4.4e-13 Score=87.10 Aligned_cols=83 Identities=17% Similarity=0.186 Sum_probs=71.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC--CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCC--
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT--SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMT-- 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~--~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~-- 70 (89)
.|+..|.+++|+|.|++||+++-|.++.||.-.. .+++..+.+|...|.| ++||+||+|++|.||.+..
T Consensus 59 ~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~dedd 138 (312)
T KOG0645|consen 59 GHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDD 138 (312)
T ss_pred cchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCC
Confidence 3667799999999999999999999999999764 4678899999999988 8999999999999999963
Q ss_pred -CEEEeeeCCCCCCC
Q psy12376 71 -SKRVPVLGKHTKSK 84 (89)
Q Consensus 71 -~~~~~~l~~h~~~~ 84 (89)
-.+...|..|+.-+
T Consensus 139 Efec~aVL~~HtqDV 153 (312)
T KOG0645|consen 139 EFECIAVLQEHTQDV 153 (312)
T ss_pred cEEEEeeeccccccc
Confidence 35667888888653
No 33
>KOG0292|consensus
Probab=99.48 E-value=1.3e-13 Score=100.39 Aligned_cols=86 Identities=13% Similarity=0.107 Sum_probs=79.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
.|.++|..+.|+|++.+|++|++|-+|++|+..+.+++..+.+|-+-|+. ..|.|+|+|.+|+|||-.++.++
T Consensus 49 eHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~i 128 (1202)
T KOG0292|consen 49 EHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCI 128 (1202)
T ss_pred ccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceE
Confidence 47889999999999999999999999999999999999999999998886 78999999999999999999999
Q ss_pred eeeCCCCCCCcCC
Q psy12376 75 PVLGKHTKSKPST 87 (89)
Q Consensus 75 ~~l~~h~~~~~~~ 87 (89)
..+-+|.-=+++.
T Consensus 129 avltGHnHYVMcA 141 (1202)
T KOG0292|consen 129 AVLTGHNHYVMCA 141 (1202)
T ss_pred EEEecCceEEEee
Confidence 9999997666554
No 34
>KOG0318|consensus
Probab=99.48 E-value=2e-13 Score=94.71 Aligned_cols=86 Identities=22% Similarity=0.235 Sum_probs=73.6
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec-CCcceeec-------cEEEEEeCCCCEEEEeCCC-C
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG-KHTNTIVG-------QVLAIGTARGNLTVYNHMT-S 71 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~-~h~~~i~~-------~~las~s~d~~v~iwd~~~-~ 71 (89)
+.|+.+|++++||||+.|||++...+++.+||..+.+...... -|..+|.| .++|+||.|.+|.||+++. .
T Consensus 484 ~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~ 563 (603)
T KOG0318|consen 484 LEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPA 563 (603)
T ss_pred ecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChh
Confidence 3578899999999999999999999999999999887654444 49999998 8999999999999999964 4
Q ss_pred EEEeeeCCCCCCCcC
Q psy12376 72 KRVPVLGKHTKSKPS 86 (89)
Q Consensus 72 ~~~~~l~~h~~~~~~ 86 (89)
+.+...++|...++.
T Consensus 564 ~~i~iknAH~~gVn~ 578 (603)
T KOG0318|consen 564 KHIIIKNAHLGGVNS 578 (603)
T ss_pred hheEeccccccCcee
Confidence 556667899887664
No 35
>KOG0318|consensus
Probab=99.48 E-value=4.7e-13 Score=92.93 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=68.1
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec---CCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG---KHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~---~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
.=|.|+.|||||++||+.+.||++.+||..+|+.+..+. +|++.|.+ +.|+++|.|.+++|||+.+++++
T Consensus 191 kFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv 270 (603)
T KOG0318|consen 191 KFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLV 270 (603)
T ss_pred cceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceE
Confidence 348999999999999999999999999999999999988 79998887 89999999999999999998888
Q ss_pred eeeC
Q psy12376 75 PVLG 78 (89)
Q Consensus 75 ~~l~ 78 (89)
.++.
T Consensus 271 ~t~~ 274 (603)
T KOG0318|consen 271 STWP 274 (603)
T ss_pred EEee
Confidence 7654
No 36
>KOG0273|consensus
Probab=99.47 E-value=3e-13 Score=92.81 Aligned_cols=82 Identities=22% Similarity=0.291 Sum_probs=70.3
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE-----------------------------------------ee
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR-----------------------------------------VP 40 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~-----------------------------------------~~ 40 (89)
.|+.+|.++.|+..|.||++++.||++.+||.-+|.. +.
T Consensus 274 ~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~ 353 (524)
T KOG0273|consen 274 QHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVK 353 (524)
T ss_pred ccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcce
Confidence 4789999999999999999999999999999977754 22
Q ss_pred EecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCCC
Q psy12376 41 VLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLGKHTKS 83 (89)
Q Consensus 41 ~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~~h~~~ 83 (89)
.+.+|.++|.+ .+|+|+|+|++++||+.......+-|.+|++.
T Consensus 354 t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hske 403 (524)
T KOG0273|consen 354 TFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKE 403 (524)
T ss_pred eeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccc
Confidence 35567777776 79999999999999999888888889999854
No 37
>KOG0279|consensus
Probab=99.47 E-value=3.7e-13 Score=87.67 Aligned_cols=83 Identities=8% Similarity=0.093 Sum_probs=70.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec---------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG---------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~---------~~las~s~d~~v~iwd~~~ 70 (89)
+|...+.+++|+||..++++|+.|.++.+||+-.+ +..++.. +.+.|.| .+|+++|.|++|++||+++
T Consensus 103 GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~ 181 (315)
T KOG0279|consen 103 GHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRN 181 (315)
T ss_pred ecCCceEEEEecCCCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCC
Confidence 57778999999999999999999999999998754 4444433 3677777 6999999999999999999
Q ss_pred CEEEeeeCCCCCCCc
Q psy12376 71 SKRVPVLGKHTKSKP 85 (89)
Q Consensus 71 ~~~~~~l~~h~~~~~ 85 (89)
.+..+.+.+|+.-++
T Consensus 182 ~~l~~~~~gh~~~v~ 196 (315)
T KOG0279|consen 182 CQLRTTFIGHSGYVN 196 (315)
T ss_pred cchhhccccccccEE
Confidence 999888999987654
No 38
>KOG0276|consensus
Probab=99.46 E-value=6.7e-14 Score=98.82 Aligned_cols=86 Identities=15% Similarity=0.148 Sum_probs=79.1
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~~ 71 (89)
+|...|.+++|.| |-+.+|+++-|++|++|...+.....++++|...|+| .+|+||++|.++.|||..+.
T Consensus 138 GH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk 217 (794)
T KOG0276|consen 138 GHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTK 217 (794)
T ss_pred CcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchH
Confidence 5777799999999 6789999999999999999888888899999999998 69999999999999999999
Q ss_pred EEEeeeCCCCCCCcCC
Q psy12376 72 KRVPVLGKHTKSKPST 87 (89)
Q Consensus 72 ~~~~~l~~h~~~~~~~ 87 (89)
.++++|.+|+.-++++
T Consensus 218 ~CV~TLeGHt~Nvs~v 233 (794)
T KOG0276|consen 218 SCVQTLEGHTNNVSFV 233 (794)
T ss_pred HHHHHhhcccccceEE
Confidence 9999999999888764
No 39
>KOG0308|consensus
Probab=99.46 E-value=3e-13 Score=95.67 Aligned_cols=83 Identities=17% Similarity=0.293 Sum_probs=77.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+++++|++++-.+.|..|++|+..+.+++||.++++.+..+++|...|++ ..+.|+|.|++|++||+....++
T Consensus 169 G~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl 248 (735)
T KOG0308|consen 169 GPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCL 248 (735)
T ss_pred CCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccccee
Confidence 56788999999999999999999999999999999999999999998887 89999999999999999988999
Q ss_pred eeeCCCCCCC
Q psy12376 75 PVLGKHTKSK 84 (89)
Q Consensus 75 ~~l~~h~~~~ 84 (89)
+++..|...+
T Consensus 249 ~T~~vH~e~V 258 (735)
T KOG0308|consen 249 ATYIVHKEGV 258 (735)
T ss_pred eeEEeccCce
Confidence 9999998763
No 40
>KOG0973|consensus
Probab=99.45 E-value=6.1e-13 Score=97.43 Aligned_cols=83 Identities=18% Similarity=0.234 Sum_probs=72.1
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC-------C-----------eEeeEecCCcceeec-------cEEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT-------S-----------KRVPVLGKHTNTIVG-------QVLAI 56 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~-------~-----------~~~~~~~~h~~~i~~-------~~las 56 (89)
.|...+.|+.|||||++||+|++|..|.||+... | +.+..+.+|...|.. .+||+
T Consensus 67 ~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS 146 (942)
T KOG0973|consen 67 DHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVS 146 (942)
T ss_pred cccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEE
Confidence 4677899999999999999999999999999772 1 245667788887766 89999
Q ss_pred EeCCCCEEEEeCCCCEEEeeeCCCCCCC
Q psy12376 57 GTARGNLTVYNHMTSKRVPVLGKHTKSK 84 (89)
Q Consensus 57 ~s~d~~v~iwd~~~~~~~~~l~~h~~~~ 84 (89)
+|.|++|.|||..+.++...+.+|...|
T Consensus 147 ~s~DnsViiwn~~tF~~~~vl~~H~s~V 174 (942)
T KOG0973|consen 147 VSLDNSVIIWNAKTFELLKVLRGHQSLV 174 (942)
T ss_pred ecccceEEEEccccceeeeeeecccccc
Confidence 9999999999999999999999998654
No 41
>KOG0647|consensus
Probab=99.45 E-value=6.4e-13 Score=87.37 Aligned_cols=75 Identities=16% Similarity=0.200 Sum_probs=66.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~~~ 72 (89)
.|..++.+++|+-||..+++|+.|+.+++||+.++ ++..+..|..+|.+ ..|++||.|++|+.||.+...
T Consensus 70 ~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~ 148 (347)
T KOG0647|consen 70 SHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN 148 (347)
T ss_pred ccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCC
Confidence 46788999999999999999999999999999998 56788889998876 578999999999999999766
Q ss_pred EEeee
Q psy12376 73 RVPVL 77 (89)
Q Consensus 73 ~~~~l 77 (89)
.+..+
T Consensus 149 pv~t~ 153 (347)
T KOG0647|consen 149 PVATL 153 (347)
T ss_pred eeeee
Confidence 66554
No 42
>KOG0282|consensus
Probab=99.43 E-value=1.1e-13 Score=94.92 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=70.3
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
+|+..|+++.|.| .+..|++++.|+.|+||+.+. +++++.+.+|..+|++ ..|.|+|-|++|++||+++|+
T Consensus 212 gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~ 291 (503)
T KOG0282|consen 212 GHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQ 291 (503)
T ss_pred CCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccce
Confidence 5788899999999 899999999999999999986 8899999999999887 789999999999999999999
Q ss_pred EEeee
Q psy12376 73 RVPVL 77 (89)
Q Consensus 73 ~~~~l 77 (89)
+...+
T Consensus 292 ~~~~f 296 (503)
T KOG0282|consen 292 VLSRF 296 (503)
T ss_pred EEEEE
Confidence 88764
No 43
>KOG0643|consensus
Probab=99.43 E-value=1.6e-12 Score=84.57 Aligned_cols=78 Identities=15% Similarity=0.209 Sum_probs=73.0
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
++|..+++.+.|..+|..|.+++.|.+..+|-.-+|+.+..+.+|.+.|.| +++++|+.|+++++||+.+|++
T Consensus 7 ~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~ 86 (327)
T KOG0643|consen 7 QGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQ 86 (327)
T ss_pred ccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcE
Confidence 478889999999999999999999999999998899999999999999998 8999999999999999999998
Q ss_pred EeeeC
Q psy12376 74 VPVLG 78 (89)
Q Consensus 74 ~~~l~ 78 (89)
+....
T Consensus 87 la~~k 91 (327)
T KOG0643|consen 87 LATWK 91 (327)
T ss_pred EEEee
Confidence 87653
No 44
>KOG0275|consensus
Probab=99.43 E-value=4.3e-14 Score=94.21 Aligned_cols=82 Identities=24% Similarity=0.280 Sum_probs=68.7
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe--------cCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL--------GKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~--------~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
..+.|..|||||++|++|+.||-|.+||..+|+....+ .-|..+|.| .++|+|+.||.|.+|.++
T Consensus 214 Sh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~ 293 (508)
T KOG0275|consen 214 SHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE 293 (508)
T ss_pred cchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEe
Confidence 45789999999999999999999999999998764322 235667777 799999999999999999
Q ss_pred CCEEEeeeC-CCCCCCcC
Q psy12376 70 TSKRVPVLG-KHTKSKPS 86 (89)
Q Consensus 70 ~~~~~~~l~-~h~~~~~~ 86 (89)
+|.++..+. +|++.+-+
T Consensus 294 tG~ClRrFdrAHtkGvt~ 311 (508)
T KOG0275|consen 294 TGQCLRRFDRAHTKGVTC 311 (508)
T ss_pred cchHHHHhhhhhccCeeE
Confidence 999988775 88877543
No 45
>KOG0316|consensus
Probab=99.43 E-value=5e-13 Score=85.80 Aligned_cols=80 Identities=14% Similarity=0.154 Sum_probs=70.2
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc---eeec------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN---TIVG------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~---~i~~------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
..+|+++.||+||++.++++-|+++++.|..+|+.+..+.+|+. .+.| ..+++||+||.|++||+.+..++
T Consensus 183 g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~ 262 (307)
T KOG0316|consen 183 GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQI 262 (307)
T ss_pred CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccceee
Confidence 45799999999999999999999999999999999999999875 4555 79999999999999999988888
Q ss_pred eeeCCCCCC
Q psy12376 75 PVLGKHTKS 83 (89)
Q Consensus 75 ~~l~~h~~~ 83 (89)
..+..|+..
T Consensus 263 sk~~~~~~v 271 (307)
T KOG0316|consen 263 SKLSVVSTV 271 (307)
T ss_pred eeeccCCce
Confidence 777665543
No 46
>KOG0647|consensus
Probab=99.42 E-value=6.2e-13 Score=87.44 Aligned_cols=81 Identities=15% Similarity=0.232 Sum_probs=66.3
Q ss_pred CCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCC-CeEeeE-ecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 4 RYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMT-SKRVPV-LGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 4 ~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~-~~~~~~-~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
.|.|.+|+||| ...++++|++||+|++|++.. |..+.+ ...|.+++.+ ..+++|+.|+.+++||+.+++.
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~ 106 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQV 106 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCe
Confidence 46799999999 556778999999999999975 555443 3468888877 7999999999999999999855
Q ss_pred EeeeCCCCCCCc
Q psy12376 74 VPVLGKHTKSKP 85 (89)
Q Consensus 74 ~~~l~~h~~~~~ 85 (89)
..++.|.+.+.
T Consensus 107 -~~v~~Hd~pvk 117 (347)
T KOG0647|consen 107 -SQVAAHDAPVK 117 (347)
T ss_pred -eeeeeccccee
Confidence 56788887754
No 47
>KOG0277|consensus
Probab=99.42 E-value=1.1e-12 Score=84.85 Aligned_cols=81 Identities=10% Similarity=0.258 Sum_probs=68.6
Q ss_pred cCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 3 LRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 3 ~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~ 73 (89)
|..+|.++.|++ .++.++++++||+|++|+..-.+.+.++.+|...|.. +.++++|.|++++|||++...+
T Consensus 103 H~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk 182 (311)
T KOG0277|consen 103 HKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGK 182 (311)
T ss_pred hhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCc
Confidence 667899999998 5678889999999999999888889999999998875 8999999999999999975433
Q ss_pred EeeeCCCCCC
Q psy12376 74 VPVLGKHTKS 83 (89)
Q Consensus 74 ~~~l~~h~~~ 83 (89)
...+..|...
T Consensus 183 ~~~i~ah~~E 192 (311)
T KOG0277|consen 183 FMSIEAHNSE 192 (311)
T ss_pred eeEEEeccce
Confidence 3337777743
No 48
>KOG0264|consensus
Probab=99.41 E-value=1.8e-12 Score=88.20 Aligned_cols=84 Identities=17% Similarity=0.215 Sum_probs=68.0
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC-
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT- 70 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~- 70 (89)
.|..++.|++|+| ++..||+|+.|++|.+||.|+ .+.+..+.+|...|.+ ..|||++.|+.+.|||+..
T Consensus 270 ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~i 349 (422)
T KOG0264|consen 270 AHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRI 349 (422)
T ss_pred ccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecccc
Confidence 3677899999999 456889999999999999997 4567888999998877 8999999999999999953
Q ss_pred CEEE-------------eeeCCCCCCCc
Q psy12376 71 SKRV-------------PVLGKHTKSKP 85 (89)
Q Consensus 71 ~~~~-------------~~l~~h~~~~~ 85 (89)
++.. ..-+||+.+++
T Consensus 350 g~eq~~eda~dgppEllF~HgGH~~kV~ 377 (422)
T KOG0264|consen 350 GEEQSPEDAEDGPPELLFIHGGHTAKVS 377 (422)
T ss_pred ccccChhhhccCCcceeEEecCcccccc
Confidence 3322 23378887764
No 49
>KOG0289|consensus
Probab=99.41 E-value=9.6e-13 Score=89.81 Aligned_cols=72 Identities=15% Similarity=0.237 Sum_probs=64.2
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.+++.+|+|||..|++|+.||.|++||..++..+..|.+|.++|.+ -+||++.+|+.|.+||++--+..+++
T Consensus 349 ~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~ 427 (506)
T KOG0289|consen 349 EYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTI 427 (506)
T ss_pred eeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhccccee
Confidence 3899999999999999999999999999988888999999999987 68999999999999999855544443
No 50
>KOG0293|consensus
Probab=99.40 E-value=1.1e-12 Score=89.21 Aligned_cols=84 Identities=17% Similarity=0.260 Sum_probs=75.8
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc---eeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN---TIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~---~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
..+|++++.|.||++++..-.+.++++||....+.++++.||+. .|++ .+++|||+|+.|+||+..+++.
T Consensus 395 ~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkl 474 (519)
T KOG0293|consen 395 EQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKL 474 (519)
T ss_pred cCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCce
Confidence 45799999999999999999999999999998888999999864 3443 7999999999999999999999
Q ss_pred EeeeCCCCCCCcCC
Q psy12376 74 VPVLGKHTKSKPST 87 (89)
Q Consensus 74 ~~~l~~h~~~~~~~ 87 (89)
+..|.+|++.++++
T Consensus 475 l~~LsGHs~~vNcV 488 (519)
T KOG0293|consen 475 LAVLSGHSKTVNCV 488 (519)
T ss_pred eEeecCCcceeeEE
Confidence 99999999988765
No 51
>KOG0274|consensus
Probab=99.40 E-value=1.4e-12 Score=92.28 Aligned_cols=81 Identities=22% Similarity=0.263 Sum_probs=68.9
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCC-EEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTS-KRVP 75 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~-~~~~ 75 (89)
|.++|.++..+ +.++++|+.||.|.+||+.+++++..+.+|..+|.+ +++.+|+.|++|++||+++. +++.
T Consensus 330 h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~ 407 (537)
T KOG0274|consen 330 HTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIH 407 (537)
T ss_pred ccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhh
Confidence 67788888887 678889999999999998888888888889888887 68888999988999999888 7888
Q ss_pred eeCCCCCCCc
Q psy12376 76 VLGKHTKSKP 85 (89)
Q Consensus 76 ~l~~h~~~~~ 85 (89)
++.+|+..++
T Consensus 408 tl~~h~~~v~ 417 (537)
T KOG0274|consen 408 TLQGHTSLVS 417 (537)
T ss_pred hhcCCccccc
Confidence 8888887654
No 52
>KOG0281|consensus
Probab=99.40 E-value=9.8e-13 Score=88.31 Aligned_cols=85 Identities=15% Similarity=0.212 Sum_probs=54.5
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCccee-------------------------------
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTI------------------------------- 49 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i------------------------------- 49 (89)
++|.+.|.|++| |.+.|++|+.|.+|++||..+|+.+..+-.|...|
T Consensus 234 ~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it 311 (499)
T KOG0281|consen 234 TGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDIT 311 (499)
T ss_pred hcCCCcEEeeec--cceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHH
Confidence 367777777777 44577888888888888887777644433332211
Q ss_pred ------------ec-----cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCCCCcCC
Q psy12376 50 ------------VG-----QVLAIGTARGNLTVYNHMTSKRVPVLGKHTKSKPST 87 (89)
Q Consensus 50 ------------~~-----~~las~s~d~~v~iwd~~~~~~~~~l~~h~~~~~~~ 87 (89)
+. +|++++|.|.++++|+..+++.+.++.+|.+.+-+-
T Consensus 312 ~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIACl 366 (499)
T KOG0281|consen 312 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 366 (499)
T ss_pred HHHHHhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccccceeh
Confidence 11 667777777777777777677666777776665443
No 53
>KOG0264|consensus
Probab=99.39 E-value=5.7e-13 Score=90.56 Aligned_cols=86 Identities=13% Similarity=0.155 Sum_probs=72.2
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCC--CeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMT--SKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~--~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
+|.+.|..++|+| +...|++.++|+.+.|||.|+ .+......+|...|.| .+||+||.|++|.+||++.
T Consensus 225 ~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRn 304 (422)
T KOG0264|consen 225 GHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRN 304 (422)
T ss_pred cCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechh
Confidence 4677899999999 456889999999999999994 4445566789999988 7999999999999999974
Q ss_pred -CEEEeeeCCCCCCCcCC
Q psy12376 71 -SKRVPVLGKHTKSKPST 87 (89)
Q Consensus 71 -~~~~~~l~~h~~~~~~~ 87 (89)
.+..+.+.+|...+..+
T Consensus 305 L~~~lh~~e~H~dev~~V 322 (422)
T KOG0264|consen 305 LNKPLHTFEGHEDEVFQV 322 (422)
T ss_pred cccCceeccCCCcceEEE
Confidence 56778899999876544
No 54
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.39 E-value=4.5e-12 Score=92.71 Aligned_cols=84 Identities=17% Similarity=0.243 Sum_probs=68.4
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~ 72 (89)
+|.+.|++++|+| ++.+|++|+.||.|++||+++++.+..+..+ ..+.+ .+|++|+.|+.|++||++.+.
T Consensus 573 ~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~ 651 (793)
T PLN00181 573 EHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPK 651 (793)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 4677899999997 7899999999999999999998887777654 33433 689999999999999998654
Q ss_pred -EEeeeCCCCCCCcC
Q psy12376 73 -RVPVLGKHTKSKPS 86 (89)
Q Consensus 73 -~~~~l~~h~~~~~~ 86 (89)
....+.+|...+.+
T Consensus 652 ~~~~~~~~h~~~V~~ 666 (793)
T PLN00181 652 LPLCTMIGHSKTVSY 666 (793)
T ss_pred ccceEecCCCCCEEE
Confidence 45667788876653
No 55
>KOG0283|consensus
Probab=99.38 E-value=1.1e-12 Score=94.04 Aligned_cols=76 Identities=17% Similarity=0.233 Sum_probs=62.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC--------------------------------C-------------
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT--------------------------------S------------- 36 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~--------------------------------~------------- 36 (89)
.|.+.|+++.||+||+|||+|+.||.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 3678899999999999999999999999999765 0
Q ss_pred ---------------eEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 37 ---------------KRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 37 ---------------~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+.++.+.+|...|.+ ++|.|+|.|.+|++|++....+++.+
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F 406 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVF 406 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEE
Confidence 002335567666665 89999999999999999988888765
No 56
>KOG0292|consensus
Probab=99.37 E-value=6.9e-12 Score=91.58 Aligned_cols=69 Identities=10% Similarity=0.173 Sum_probs=65.7
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
.+|-|.|..+.|++...+++++++|.+|+||+-.+++++..++||+.-|.| .+++|||.|.+|+|||+.
T Consensus 90 ~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDis 165 (1202)
T KOG0292|consen 90 LGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDIS 165 (1202)
T ss_pred ccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeec
Confidence 368889999999999999999999999999999999999999999999998 799999999999999995
No 57
>KOG0296|consensus
Probab=99.36 E-value=1.6e-11 Score=82.39 Aligned_cols=85 Identities=16% Similarity=0.205 Sum_probs=69.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec-CCccee------eccEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG-KHTNTI------VGQVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~-~h~~~i------~~~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|++.|+++.||.||.+||+|.-+|.|+||+..+|.....+- .-.... ++.+|+.|+.||.+.+|.+..+...
T Consensus 104 gHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~ 183 (399)
T KOG0296|consen 104 GHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALC 183 (399)
T ss_pred CCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCccee
Confidence 689999999999999999999999999999999987666552 211111 1179999999999999999877777
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
+.+.+|..+..+
T Consensus 184 kv~~Gh~~~ct~ 195 (399)
T KOG0296|consen 184 KVMSGHNSPCTC 195 (399)
T ss_pred eEecCCCCCccc
Confidence 889999877554
No 58
>KOG0299|consensus
Probab=99.36 E-value=1e-12 Score=89.86 Aligned_cols=83 Identities=20% Similarity=0.212 Sum_probs=75.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...+.+++.||||++||+|..|..|.||+.++.+-+..+.+|.+.|.+ ..+.+++.|++|.+|+++....+
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~v 279 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYV 279 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHH
Confidence 35567999999999999999999999999999999999999999999887 68999999999999999988888
Q ss_pred eeeCCCCCCC
Q psy12376 75 PVLGKHTKSK 84 (89)
Q Consensus 75 ~~l~~h~~~~ 84 (89)
.++-+|+..+
T Consensus 280 etlyGHqd~v 289 (479)
T KOG0299|consen 280 ETLYGHQDGV 289 (479)
T ss_pred HHHhCCccce
Confidence 8888888764
No 59
>KOG0315|consensus
Probab=99.36 E-value=3.7e-12 Score=82.25 Aligned_cols=75 Identities=13% Similarity=0.181 Sum_probs=62.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|+..|+++.|.-||+++++|++||+++|||++.-.+.+.+ .|..+|++ .-|++|..+|.|+|||+......
T Consensus 81 ~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~ 159 (311)
T KOG0315|consen 81 GHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCT 159 (311)
T ss_pred ccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhc-cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccc
Confidence 35567999999999999999999999999999985444444 46688877 67999999999999999877665
Q ss_pred eee
Q psy12376 75 PVL 77 (89)
Q Consensus 75 ~~l 77 (89)
+.+
T Consensus 160 ~~l 162 (311)
T KOG0315|consen 160 HEL 162 (311)
T ss_pred ccc
Confidence 544
No 60
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.36 E-value=2.3e-11 Score=76.14 Aligned_cols=82 Identities=21% Similarity=0.238 Sum_probs=69.5
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+...+..+.|+|++++|++++.+|.+.+||..+++.+..+..|...+.+ +++++++.|+.+.+||+++++...
T Consensus 50 ~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 129 (289)
T cd00200 50 HTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLT 129 (289)
T ss_pred CCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEE
Confidence 4556889999999999999999999999999988788888888877766 578888789999999999888777
Q ss_pred eeCCCCCCC
Q psy12376 76 VLGKHTKSK 84 (89)
Q Consensus 76 ~l~~h~~~~ 84 (89)
.+..|...+
T Consensus 130 ~~~~~~~~i 138 (289)
T cd00200 130 TLRGHTDWV 138 (289)
T ss_pred EeccCCCcE
Confidence 777776554
No 61
>KOG0276|consensus
Probab=99.36 E-value=4.4e-12 Score=89.80 Aligned_cols=85 Identities=9% Similarity=0.077 Sum_probs=77.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~ 73 (89)
|+|.|.+++.+|...+++++++|-.|++||-.. ..+...+++|...|.+ +.||||+.|++|.||++.+...
T Consensus 96 H~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~ 175 (794)
T KOG0276|consen 96 HSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHP 175 (794)
T ss_pred cccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCC
Confidence 788999999999999999999999999999865 4567789999988876 8999999999999999999889
Q ss_pred EeeeCCCCCCCcCC
Q psy12376 74 VPVLGKHTKSKPST 87 (89)
Q Consensus 74 ~~~l~~h~~~~~~~ 87 (89)
..++.+|.+.++++
T Consensus 176 nfTl~gHekGVN~V 189 (794)
T KOG0276|consen 176 NFTLEGHEKGVNCV 189 (794)
T ss_pred ceeeeccccCcceE
Confidence 99999999999875
No 62
>KOG1407|consensus
Probab=99.36 E-value=2e-12 Score=83.84 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=69.2
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
|+....|++|+|+|++||+|+.|..+-+||+..--+++.+..+..+|+. ++||+||+|..|.|=++++|.++.
T Consensus 188 H~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~ 267 (313)
T KOG1407|consen 188 HPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVW 267 (313)
T ss_pred CCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEE
Confidence 5667899999999999999999999999999988888999888888886 899999999999999999998877
Q ss_pred eeC
Q psy12376 76 VLG 78 (89)
Q Consensus 76 ~l~ 78 (89)
.+.
T Consensus 268 eI~ 270 (313)
T KOG1407|consen 268 EIP 270 (313)
T ss_pred Eee
Confidence 653
No 63
>KOG0306|consensus
Probab=99.36 E-value=3.2e-12 Score=91.80 Aligned_cols=87 Identities=20% Similarity=0.204 Sum_probs=81.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
.+++.|.|+++||||++||++--|.++.||-+.+-+..-.+.||+-||.| +++++||.|.+|.||=++=|.+-
T Consensus 506 el~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCH 585 (888)
T KOG0306|consen 506 ELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCH 585 (888)
T ss_pred eccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhh
Confidence 45678999999999999999999999999999999888888999999998 89999999999999999889999
Q ss_pred eeeCCCCCCCcCCC
Q psy12376 75 PVLGKHTKSKPSTE 88 (89)
Q Consensus 75 ~~l~~h~~~~~~~~ 88 (89)
+.+-+|+.+++++|
T Consensus 586 KS~fAHdDSvm~V~ 599 (888)
T KOG0306|consen 586 KSFFAHDDSVMSVQ 599 (888)
T ss_pred hhhhcccCceeEEE
Confidence 99999999998875
No 64
>KOG0275|consensus
Probab=99.35 E-value=1.4e-13 Score=91.78 Aligned_cols=84 Identities=14% Similarity=0.199 Sum_probs=76.7
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec-CCcceeec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG-KHTNTIVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~-~h~~~i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
|-+.+++.|+.||.|.++||+|+.||.|++|.+.+|.+++.+. .|...|.| ..+.++|.|.+++|--+++|+
T Consensus 260 MMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK 339 (508)
T KOG0275|consen 260 MMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK 339 (508)
T ss_pred eecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccch
Confidence 3467789999999999999999999999999999999999886 79998888 689999999999999999999
Q ss_pred EEeeeCCCCCCC
Q psy12376 73 RVPVLGKHTKSK 84 (89)
Q Consensus 73 ~~~~l~~h~~~~ 84 (89)
..+.+.+|+.-+
T Consensus 340 ~LKEfrGHsSyv 351 (508)
T KOG0275|consen 340 CLKEFRGHSSYV 351 (508)
T ss_pred hHHHhcCccccc
Confidence 999999998644
No 65
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.34 E-value=2.1e-11 Score=89.26 Aligned_cols=77 Identities=14% Similarity=0.222 Sum_probs=66.6
Q ss_pred CCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 4 RYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 4 ~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
...+.+++|+| ++.+||+++.||.|++||..+++.+..+.+|...|.+ .+|++|+.|++|++||++++...
T Consensus 532 ~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~ 611 (793)
T PLN00181 532 RSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSI 611 (793)
T ss_pred cCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEE
Confidence 34688999997 5789999999999999999999988999999998876 58999999999999999988777
Q ss_pred eeeCCC
Q psy12376 75 PVLGKH 80 (89)
Q Consensus 75 ~~l~~h 80 (89)
..+..+
T Consensus 612 ~~~~~~ 617 (793)
T PLN00181 612 GTIKTK 617 (793)
T ss_pred EEEecC
Confidence 665443
No 66
>KOG0296|consensus
Probab=99.33 E-value=2.3e-11 Score=81.60 Aligned_cols=73 Identities=16% Similarity=0.250 Sum_probs=68.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
.|.-+.|+|-+..|++|+.||.+-+|.+.++.....+.+|+.+..| +.++++..|++|++||+.+++.++.+.
T Consensus 150 dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 150 DIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred ceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEec
Confidence 4788999999999999999999999999987788899999999888 899999999999999999999988876
No 67
>KOG0294|consensus
Probab=99.33 E-value=9.6e-12 Score=82.28 Aligned_cols=81 Identities=19% Similarity=0.276 Sum_probs=73.4
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~~~~ 73 (89)
|..+|++++. +|.++|+|+.|-+|+|||++..+.+..+-.|.+.|+| +.|.+|++||.|.+|++.....
T Consensus 42 H~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~ 119 (362)
T KOG0294|consen 42 HAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWEL 119 (362)
T ss_pred cccceeEEEe--cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEE
Confidence 5677999998 6799999999999999999998888888889999988 4899999999999999999999
Q ss_pred EeeeCCCCCCCc
Q psy12376 74 VPVLGKHTKSKP 85 (89)
Q Consensus 74 ~~~l~~h~~~~~ 85 (89)
++.+.+|...|.
T Consensus 120 ~~slK~H~~~Vt 131 (362)
T KOG0294|consen 120 LKSLKAHKGQVT 131 (362)
T ss_pred eeeecccccccc
Confidence 999999998764
No 68
>KOG0284|consensus
Probab=99.32 E-value=8.9e-13 Score=89.36 Aligned_cols=85 Identities=16% Similarity=0.213 Sum_probs=74.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
|.-.+.+++|+|..-.+|+|++|..|++||.++|.++..+.+|+..|.. ++|+++|.|..++++|+++-+-+.
T Consensus 221 HgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~ 300 (464)
T KOG0284|consen 221 HGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELF 300 (464)
T ss_pred CCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHH
Confidence 4445899999999999999999999999999999999999999998887 899999999999999998655666
Q ss_pred eeCCCCCCCcCC
Q psy12376 76 VLGKHTKSKPST 87 (89)
Q Consensus 76 ~l~~h~~~~~~~ 87 (89)
...+|.+.+.+.
T Consensus 301 ~~r~Hkkdv~~~ 312 (464)
T KOG0284|consen 301 TYRGHKKDVTSL 312 (464)
T ss_pred Hhhcchhhheee
Confidence 778888776553
No 69
>KOG0295|consensus
Probab=99.32 E-value=9.1e-12 Score=83.53 Aligned_cols=85 Identities=18% Similarity=0.221 Sum_probs=75.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec----------------------cEEEEEeC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG----------------------QVLAIGTA 59 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~----------------------~~las~s~ 59 (89)
+|+..+.-++.+-||..+|+++.|.++++|-..++.+...+..|.-++.| .++++++.
T Consensus 233 ~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~Sr 312 (406)
T KOG0295|consen 233 GHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSR 312 (406)
T ss_pred CchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecc
Confidence 46677889999999999999999999999999998777778888887776 49999999
Q ss_pred CCCEEEEeCCCCEEEeeeCCCCCCCcC
Q psy12376 60 RGNLTVYNHMTSKRVPVLGKHTKSKPS 86 (89)
Q Consensus 60 d~~v~iwd~~~~~~~~~l~~h~~~~~~ 86 (89)
|++|++||+.++.++-+|.+|.+-++.
T Consensus 313 DktIk~wdv~tg~cL~tL~ghdnwVr~ 339 (406)
T KOG0295|consen 313 DKTIKIWDVSTGMCLFTLVGHDNWVRG 339 (406)
T ss_pred cceEEEEeccCCeEEEEEecccceeee
Confidence 999999999999999999999976653
No 70
>KOG0283|consensus
Probab=99.31 E-value=6.8e-12 Score=90.09 Aligned_cols=73 Identities=14% Similarity=0.176 Sum_probs=66.1
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~ 72 (89)
.+|.+.|..|.||.++ +|++++.|.+|++|++...+++.+|. |.+.|+| +||++|+.|+.++||++.+.+
T Consensus 366 ~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~ 443 (712)
T KOG0283|consen 366 KGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKK 443 (712)
T ss_pred hccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCe
Confidence 4788899999999984 99999999999999999888888885 9999998 899999999999999998777
Q ss_pred EEe
Q psy12376 73 RVP 75 (89)
Q Consensus 73 ~~~ 75 (89)
+..
T Consensus 444 Vv~ 446 (712)
T KOG0283|consen 444 VVD 446 (712)
T ss_pred eEe
Confidence 654
No 71
>KOG1446|consensus
Probab=99.31 E-value=3.8e-11 Score=79.06 Aligned_cols=74 Identities=15% Similarity=0.224 Sum_probs=61.6
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE--------------------------------------------e
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR--------------------------------------------V 39 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~--------------------------------------------~ 39 (89)
...|.++.|+++|+++++++.|-.+++||..++++ +
T Consensus 14 ~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkyl 93 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYL 93 (311)
T ss_pred CCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceE
Confidence 35799999999999999999999999999988865 3
Q ss_pred eEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 40 PVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 40 ~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+.+.||+..|.. ..+.|++.|++|++||++..++...+
T Consensus 94 RYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l 138 (311)
T KOG1446|consen 94 RYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLL 138 (311)
T ss_pred EEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEE
Confidence 446677777665 78999999999999999876665554
No 72
>KOG0310|consensus
Probab=99.31 E-value=2.7e-11 Score=83.38 Aligned_cols=70 Identities=13% Similarity=0.206 Sum_probs=62.0
Q ss_pred CcCCcEEEEEEccC-CCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQV-GQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~spd-g~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~ 71 (89)
.|+.++-.+.|+|+ +.+|++|++|+.+++||+.+......+.+|++-|+| .+++|||.||.|++||.+..
T Consensus 108 ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~ 186 (487)
T KOG0310|consen 108 AHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSL 186 (487)
T ss_pred hccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccC
Confidence 36778999999995 468899999999999999998876688999999998 58999999999999999865
No 73
>KOG1446|consensus
Probab=99.31 E-value=5.8e-11 Score=78.18 Aligned_cols=83 Identities=17% Similarity=0.202 Sum_probs=68.8
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc----eeec------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN----TIVG------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~----~i~~------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
.+.+.+.|||||++++.++..+.+++.|+.+|..+..+..+.. ++.+ +++.+|+.||+|.+|+++++..+
T Consensus 188 ~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v 267 (311)
T KOG1446|consen 188 AEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKV 267 (311)
T ss_pred cceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEe
Confidence 4588999999999999999999999999999988777766543 2333 89999999999999999999888
Q ss_pred eeeCC-CCCCCcCC
Q psy12376 75 PVLGK-HTKSKPST 87 (89)
Q Consensus 75 ~~l~~-h~~~~~~~ 87 (89)
..+.+ +...+++.
T Consensus 268 ~~~~~~~~~~~~~~ 281 (311)
T KOG1446|consen 268 AVLRGPNGGPVSCV 281 (311)
T ss_pred eEecCCCCCCcccc
Confidence 87765 55555543
No 74
>KOG0313|consensus
Probab=99.30 E-value=9.1e-12 Score=83.90 Aligned_cols=83 Identities=16% Similarity=0.206 Sum_probs=70.5
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe--E-eeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK--R-VPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~--~-~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~ 72 (89)
...+.+++++|....||+|+.|..+++||.+++. . ...+-+|+..|.+ .+|++|+.|+++++||+++.+
T Consensus 300 ~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k 379 (423)
T KOG0313|consen 300 NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK 379 (423)
T ss_pred CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC
Confidence 3468999999999999999999999999998743 2 4578899998876 789999999999999998755
Q ss_pred -EEeeeCCCCCCCcC
Q psy12376 73 -RVPVLGKHTKSKPS 86 (89)
Q Consensus 73 -~~~~l~~h~~~~~~ 86 (89)
.+-.+-+|..++.+
T Consensus 380 ~plydI~~h~DKvl~ 394 (423)
T KOG0313|consen 380 APLYDIAGHNDKVLS 394 (423)
T ss_pred CcceeeccCCceEEE
Confidence 77778888877654
No 75
>KOG0973|consensus
Probab=99.30 E-value=1.5e-11 Score=90.37 Aligned_cols=80 Identities=15% Similarity=0.118 Sum_probs=71.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...|..+.|+|++.+||+++.|..|.+||.++.+.+..+.+|.+.|-. +|||+-++|++|.||++.+....
T Consensus 127 ~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~ 206 (942)
T KOG0973|consen 127 GHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIE 206 (942)
T ss_pred cCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceee
Confidence 57788999999999999999999999999999999999999999887654 99999999999999998877777
Q ss_pred eeeCCCC
Q psy12376 75 PVLGKHT 81 (89)
Q Consensus 75 ~~l~~h~ 81 (89)
+.+-++-
T Consensus 207 k~It~pf 213 (942)
T KOG0973|consen 207 KSITKPF 213 (942)
T ss_pred Eeeccch
Confidence 7665443
No 76
>KOG0649|consensus
Probab=99.30 E-value=2.9e-11 Score=78.12 Aligned_cols=74 Identities=14% Similarity=0.164 Sum_probs=65.7
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
+|.++...|..+-+..++.|+.++-||..+|+..+.+.+|++-|.| ..+.+|++||+++|||.++++.+..++
T Consensus 116 eINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie 195 (325)
T KOG0649|consen 116 EINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIE 195 (325)
T ss_pred ccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEec
Confidence 4889999997766666668999999999999999999999998887 789999999999999999999988775
Q ss_pred C
Q psy12376 79 K 79 (89)
Q Consensus 79 ~ 79 (89)
.
T Consensus 196 ~ 196 (325)
T KOG0649|consen 196 P 196 (325)
T ss_pred c
Confidence 3
No 77
>KOG0305|consensus
Probab=99.30 E-value=9.1e-12 Score=86.81 Aligned_cols=80 Identities=19% Similarity=0.311 Sum_probs=59.0
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC-Ccceeec-------------------------------
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK-HTNTIVG------------------------------- 51 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~-h~~~i~~------------------------------- 51 (89)
.+.|+++.|+++|.+||+|..+|.|.|||..+.+.++.+.+ |...|-|
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~ 296 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVST 296 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhh
Confidence 46799999999999999999999999999887766666655 5554443
Q ss_pred -----------------cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCCC
Q psy12376 52 -----------------QVLAIGTARGNLTVYNHMTSKRVPVLGKHTKS 83 (89)
Q Consensus 52 -----------------~~las~s~d~~v~iwd~~~~~~~~~l~~h~~~ 83 (89)
+++|+|+.|+.+.|||..+......+-.|.+.
T Consensus 297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aA 345 (484)
T KOG0305|consen 297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAA 345 (484)
T ss_pred hhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEecccee
Confidence 56777777777777776555555555555543
No 78
>KOG0645|consensus
Probab=99.30 E-value=5.2e-11 Score=77.55 Aligned_cols=82 Identities=17% Similarity=0.192 Sum_probs=68.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC---eEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCC--
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS---KRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHM-- 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~---~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~-- 69 (89)
+|..+|-|++||++|.+||+++.|..|=||.+..+ ++...+++|..-|.- .+|+|+|.|++|++|.-.
T Consensus 103 GHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~d 182 (312)
T KOG0645|consen 103 GHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDD 182 (312)
T ss_pred ccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCC
Confidence 57788999999999999999999999999999743 456778888764432 799999999999999986
Q ss_pred -CCEEEeeeCCCCCC
Q psy12376 70 -TSKRVPVLGKHTKS 83 (89)
Q Consensus 70 -~~~~~~~l~~h~~~ 83 (89)
+-.+.+.+.+|.+.
T Consensus 183 ddW~c~~tl~g~~~T 197 (312)
T KOG0645|consen 183 DDWECVQTLDGHENT 197 (312)
T ss_pred CCeeEEEEecCccce
Confidence 34678889999754
No 79
>KOG0267|consensus
Probab=99.29 E-value=4.4e-12 Score=90.70 Aligned_cols=88 Identities=15% Similarity=0.175 Sum_probs=79.2
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
++|...+..+.|+|-|+|+|.|+.|+.+.+||++-..+...+.+|...+.+ .+++++++|.+++|||...|+.
T Consensus 109 tgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~ 188 (825)
T KOG0267|consen 109 TGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKL 188 (825)
T ss_pred hccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccccc
Confidence 378888999999999999999999999999999966688888888887776 7999999999999999999999
Q ss_pred EeeeCCCCCCCcCCC
Q psy12376 74 VPVLGKHTKSKPSTE 88 (89)
Q Consensus 74 ~~~l~~h~~~~~~~~ 88 (89)
.+.+..|..++.+.|
T Consensus 189 ~~ef~~~e~~v~sle 203 (825)
T KOG0267|consen 189 SKEFKSHEGKVQSLE 203 (825)
T ss_pred ccccccccccccccc
Confidence 999999998887765
No 80
>KOG1273|consensus
Probab=99.29 E-value=1.1e-11 Score=82.22 Aligned_cols=71 Identities=20% Similarity=0.313 Sum_probs=64.4
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
-.|+.|++-|.+||+|+.||.|.|||..+...-+.+.+|..+|.+ .+|.++|.|..+.+||+..|...+.+
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri 103 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI 103 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence 679999999999999999999999999998777888999999987 89999999999999999888766543
No 81
>KOG0306|consensus
Probab=99.28 E-value=2.4e-11 Score=87.37 Aligned_cols=82 Identities=15% Similarity=0.200 Sum_probs=73.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...|+.+.|+..|..||+|+.|+.|.+||+-....+..+.+|+..|.. +++++.+.|+.|++||+++..+.
T Consensus 105 gHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf 184 (888)
T KOG0306|consen 105 GHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCF 184 (888)
T ss_pred ccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceee
Confidence 57888999999999999999999999999998766667789999987765 79999999999999999999998
Q ss_pred eeeCCCCCC
Q psy12376 75 PVLGKHTKS 83 (89)
Q Consensus 75 ~~l~~h~~~ 83 (89)
.+.-.|...
T Consensus 185 ~Thvd~r~E 193 (888)
T KOG0306|consen 185 ETHVDHRGE 193 (888)
T ss_pred eEEecccce
Confidence 888777654
No 82
>KOG0293|consensus
Probab=99.27 E-value=1.6e-11 Score=83.73 Aligned_cols=77 Identities=16% Similarity=0.121 Sum_probs=66.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC-C--eEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT-S--KRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~-~--~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
.|.++|+.+.||++|++||+++.|.+..+|++.. + +....+.+|..+|.. +|+++|+.|..+.+||+.+|
T Consensus 222 ~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tg 301 (519)
T KOG0293|consen 222 DHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTG 301 (519)
T ss_pred hCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcc
Confidence 4788999999999999999999999999999743 3 346678899888765 89999999999999999999
Q ss_pred EEEeeeC
Q psy12376 72 KRVPVLG 78 (89)
Q Consensus 72 ~~~~~l~ 78 (89)
...+..+
T Consensus 302 d~~~~y~ 308 (519)
T KOG0293|consen 302 DLRHLYP 308 (519)
T ss_pred hhhhhcc
Confidence 8877654
No 83
>KOG0641|consensus
Probab=99.27 E-value=4.4e-11 Score=76.88 Aligned_cols=76 Identities=20% Similarity=0.291 Sum_probs=56.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCC--CCeE------------------------------------------
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHM--TSKR------------------------------------------ 38 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~--~~~~------------------------------------------ 38 (89)
|+..|+|.+|||+|+.||+|++|..|++.--. +...
T Consensus 88 hkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~ 167 (350)
T KOG0641|consen 88 HKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYI 167 (350)
T ss_pred cCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEE
Confidence 57789999999999999999999988875432 2110
Q ss_pred --------eeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 39 --------VPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 39 --------~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
...+.+|.+-|.+ -+|++|+.|.+|++||++-+.++.++.
T Consensus 168 tdc~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~ 221 (350)
T KOG0641|consen 168 TDCGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLD 221 (350)
T ss_pred eecCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeecc
Confidence 1123344444444 689999999999999999888877764
No 84
>KOG0305|consensus
Probab=99.26 E-value=1.9e-11 Score=85.29 Aligned_cols=76 Identities=21% Similarity=0.282 Sum_probs=67.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEE--eCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIG--TARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~--s~d~~v~iwd~~~~ 71 (89)
+|+-.|..++|++|+.+||+|+.|+.+.|||....+.+..+..|+..|.+ .+||+| +.|+.|++||+.++
T Consensus 299 ~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g 378 (484)
T KOG0305|consen 299 GHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTG 378 (484)
T ss_pred cccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCC
Confidence 36778999999999999999999999999999877778888899988876 789988 67999999999998
Q ss_pred EEEeee
Q psy12376 72 KRVPVL 77 (89)
Q Consensus 72 ~~~~~l 77 (89)
..+..+
T Consensus 379 ~~i~~v 384 (484)
T KOG0305|consen 379 ARIDSV 384 (484)
T ss_pred cEeccc
Confidence 887654
No 85
>KOG0277|consensus
Probab=99.26 E-value=5.4e-11 Score=77.08 Aligned_cols=81 Identities=17% Similarity=0.245 Sum_probs=66.3
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC-
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT- 70 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~- 70 (89)
+|.+-|+..+||| ++..+|+.+.||.+++||.+. |+.+. +..|...|.| +.+++|+.|+.|++||++.
T Consensus 145 gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~ 223 (311)
T KOG0277|consen 145 GHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNL 223 (311)
T ss_pred CCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhc
Confidence 4677799999999 678999999999999999975 66555 7889877766 7999999999999999974
Q ss_pred CEEEeeeCCCCCC
Q psy12376 71 SKRVPVLGKHTKS 83 (89)
Q Consensus 71 ~~~~~~l~~h~~~ 83 (89)
...+..+.+|.-.
T Consensus 224 r~pl~eL~gh~~A 236 (311)
T KOG0277|consen 224 RTPLFELNGHGLA 236 (311)
T ss_pred cccceeecCCceE
Confidence 3445566777643
No 86
>KOG0303|consensus
Probab=99.24 E-value=1.3e-11 Score=83.61 Aligned_cols=82 Identities=16% Similarity=0.136 Sum_probs=68.5
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCe-------EeeEecCCcceeec--------cEEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSK-------RVPVLGKHTNTIVG--------QVLAIGTARGNLTV 65 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~-------~~~~~~~h~~~i~~--------~~las~s~d~~v~i 65 (89)
+|+.++..++|+| +.+.||+|+.|.+|.||++..+. .+..+.+|+.+|-- +.|+|++.|++|.|
T Consensus 79 GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~i 158 (472)
T KOG0303|consen 79 GHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSI 158 (472)
T ss_pred CccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEE
Confidence 6888999999999 55799999999999999986543 35567889887643 89999999999999
Q ss_pred EeCCCCEEEeeeCCCCCCC
Q psy12376 66 YNHMTSKRVPVLGKHTKSK 84 (89)
Q Consensus 66 wd~~~~~~~~~l~~h~~~~ 84 (89)
||+.+|+.+-.+. |+.-+
T Consensus 159 Wnv~tgeali~l~-hpd~i 176 (472)
T KOG0303|consen 159 WNVGTGEALITLD-HPDMV 176 (472)
T ss_pred EeccCCceeeecC-CCCeE
Confidence 9999998777666 87654
No 87
>KOG0310|consensus
Probab=99.23 E-value=1.8e-11 Score=84.26 Aligned_cols=84 Identities=17% Similarity=0.240 Sum_probs=72.9
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
.++.++++.|-.||+.||+|...|.|++||+.+.-.++.+.+|+.++.. ..|++|++|+.+++||+.++...
T Consensus 67 Fk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~ 146 (487)
T KOG0310|consen 67 FKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQ 146 (487)
T ss_pred hccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEE
Confidence 4577999999999999999999999999997665567888999988765 78999999999999999988876
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
..+.+|+.-+.+
T Consensus 147 ~~l~~htDYVR~ 158 (487)
T KOG0310|consen 147 AELSGHTDYVRC 158 (487)
T ss_pred EEecCCcceeEe
Confidence 688899876543
No 88
>KOG0300|consensus
Probab=99.20 E-value=4.3e-11 Score=79.86 Aligned_cols=85 Identities=14% Similarity=0.193 Sum_probs=75.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCC-CEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMT-SKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~-~~~ 73 (89)
+|+..+.++.|-..|+.++++++|.+..+||..+|+.+..+.+|...+.- +++++.|.|.+.++||.+. -..
T Consensus 270 gH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~s 349 (481)
T KOG0300|consen 270 GHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQS 349 (481)
T ss_pred ccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcce
Confidence 57788999999999999999999999999999999999999999887653 7899999999999999974 356
Q ss_pred EeeeCCCCCCCcC
Q psy12376 74 VPVLGKHTKSKPS 86 (89)
Q Consensus 74 ~~~l~~h~~~~~~ 86 (89)
+..+++|+..+-|
T Consensus 350 V~VFQGHtdtVTS 362 (481)
T KOG0300|consen 350 VAVFQGHTDTVTS 362 (481)
T ss_pred eeeecccccceeE
Confidence 6788999988654
No 89
>KOG0269|consensus
Probab=99.19 E-value=2.6e-11 Score=87.25 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=59.4
Q ss_pred CcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 5 YYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 5 ~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
+.|..+.|+| .+..|+++.+.|.+++||+|. .+...++..|.+++.| .+|||||+|++|+|||..++
T Consensus 177 ESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~ 252 (839)
T KOG0269|consen 177 ESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDS 252 (839)
T ss_pred hhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCC
Confidence 4688999999 678999999999999999986 4556788899999998 79999999999999999754
No 90
>KOG1009|consensus
Probab=99.19 E-value=2.2e-10 Score=77.78 Aligned_cols=81 Identities=19% Similarity=0.295 Sum_probs=67.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCC--------C--------CeEeeEecCCcceeec-------cEEEEEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHM--------T--------SKRVPVLGKHTNTIVG-------QVLAIGT 58 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~--------~--------~~~~~~~~~h~~~i~~-------~~las~s 58 (89)
.|...++++.|+|+|+.||+|+++|++.+|... + ......+.+|...|.. .++++++
T Consensus 63 ~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s 142 (434)
T KOG1009|consen 63 RHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGS 142 (434)
T ss_pred CCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeee
Confidence 366679999999999999999999999999865 2 1223456677776655 8999999
Q ss_pred CCCCEEEEeCCCCEEEeeeCCCCC
Q psy12376 59 ARGNLTVYNHMTSKRVPVLGKHTK 82 (89)
Q Consensus 59 ~d~~v~iwd~~~~~~~~~l~~h~~ 82 (89)
-|+++++||+..|+....+..|..
T Consensus 143 ~dns~~l~Dv~~G~l~~~~~dh~~ 166 (434)
T KOG1009|consen 143 VDNSVRLWDVHAGQLLAILDDHEH 166 (434)
T ss_pred ccceEEEEEeccceeEeecccccc
Confidence 999999999999999999888764
No 91
>KOG0640|consensus
Probab=99.16 E-value=9.7e-11 Score=77.90 Aligned_cols=79 Identities=18% Similarity=0.297 Sum_probs=66.7
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe---cCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL---GKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~---~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
.++.++.|+|.|+||++|++-..+++||+.+.++.-.. ..|++.|.+ ++.++||.||.|+|||--+++++
T Consensus 217 ~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv 296 (430)
T KOG0640|consen 217 EPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCV 296 (430)
T ss_pred ceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHH
Confidence 46899999999999999999999999999997764322 358888877 89999999999999999888888
Q ss_pred eee-CCCCCC
Q psy12376 75 PVL-GKHTKS 83 (89)
Q Consensus 75 ~~l-~~h~~~ 83 (89)
.++ .+|.+.
T Consensus 297 ~t~~~AH~gs 306 (430)
T KOG0640|consen 297 RTIGNAHGGS 306 (430)
T ss_pred HHHHhhcCCc
Confidence 766 466654
No 92
>KOG0282|consensus
Probab=99.14 E-value=2.6e-11 Score=83.53 Aligned_cols=84 Identities=10% Similarity=0.094 Sum_probs=70.8
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~ 72 (89)
|+|..+|..+.|+.+|..|++++-|+.+++||+.+|+++..+... ..+.| +.|++|+.|+.|+-||+++++
T Consensus 255 ~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~-~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k 333 (503)
T KOG0282|consen 255 KGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLD-KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK 333 (503)
T ss_pred hcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecC-CCceeeecCCCCCcEEEEecCCCcEEEEeccchH
Confidence 578889999999999999999999999999999999987776421 12223 799999999999999999999
Q ss_pred EEeeeCCCCCCCc
Q psy12376 73 RVPVLGKHTKSKP 85 (89)
Q Consensus 73 ~~~~l~~h~~~~~ 85 (89)
.++....|-..++
T Consensus 334 vvqeYd~hLg~i~ 346 (503)
T KOG0282|consen 334 VVQEYDRHLGAIL 346 (503)
T ss_pred HHHHHHhhhhhee
Confidence 8887777766543
No 93
>KOG2919|consensus
Probab=99.13 E-value=1.1e-10 Score=77.73 Aligned_cols=84 Identities=20% Similarity=0.253 Sum_probs=65.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeC-CCcEEEEeCCC-CeEeeEecCCcc----eeec------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTA-RGNLTVYNHMT-SKRVPVLGKHTN----TIVG------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~-~g~v~iwd~~~-~~~~~~~~~h~~----~i~~------~~las~s~d~~v~iwd~~ 69 (89)
+|...|+.++|.+||+.|.+|+. +-.|..||++. +..+..++.|.. +|.. ++||+|+.||.|++||++
T Consensus 248 gh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk 327 (406)
T KOG2919|consen 248 GHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLK 327 (406)
T ss_pred ccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecC
Confidence 46778999999999999999987 66999999986 445566666644 5554 899999999999999998
Q ss_pred C-CEEEeeeCCCCCCCc
Q psy12376 70 T-SKRVPVLGKHTKSKP 85 (89)
Q Consensus 70 ~-~~~~~~l~~h~~~~~ 85 (89)
+ +.....++.|+..++
T Consensus 328 ~~gn~~sv~~~~sd~vN 344 (406)
T KOG2919|consen 328 DLGNEVSVTGNYSDTVN 344 (406)
T ss_pred CCCCccccccccccccc
Confidence 6 565566666665443
No 94
>KOG0289|consensus
Probab=99.12 E-value=4.4e-10 Score=77.03 Aligned_cols=85 Identities=14% Similarity=0.214 Sum_probs=72.1
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc--eeec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN--TIVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~--~i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
.|..+|+.+..+|.|+||++++.||...+.|+++|+.+......+. .+.+ .+|++|..|+.|+|||+.++.
T Consensus 301 ~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~ 380 (506)
T KOG0289|consen 301 PHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQT 380 (506)
T ss_pred cccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcc
Confidence 4678899999999999999999999999999999988776653222 2333 789999999999999999888
Q ss_pred EEeeeCCCCCCCcC
Q psy12376 73 RVPVLGKHTKSKPS 86 (89)
Q Consensus 73 ~~~~l~~h~~~~~~ 86 (89)
....+++|+.++..
T Consensus 381 ~~a~Fpght~~vk~ 394 (506)
T KOG0289|consen 381 NVAKFPGHTGPVKA 394 (506)
T ss_pred ccccCCCCCCceeE
Confidence 88899999988653
No 95
>KOG0639|consensus
Probab=99.12 E-value=3.8e-11 Score=83.71 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=62.5
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+++++.|||.+...+++.||.|.|||+.+...++.+++|.+...| ..|=+|+-|++|+.||++++...
T Consensus 512 CyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrql 586 (705)
T KOG0639|consen 512 CYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQL 586 (705)
T ss_pred hhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhh
Confidence 678999999999999999999999999999999999999998877 68999999999999999887654
No 96
>KOG0301|consensus
Probab=99.12 E-value=1.7e-10 Score=82.35 Aligned_cols=79 Identities=10% Similarity=0.212 Sum_probs=70.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+|+.+|+++..-|++ .+++|+.|.+|++|.. ++.++.+.+|++.|+. ..|+||+.||.|+.|++ +|+++.
T Consensus 138 gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~ 213 (745)
T KOG0301|consen 138 GHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLL 213 (745)
T ss_pred CcchheeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceee
Confidence 688899999999998 8899999999999986 6788999999998887 58999999999999999 688888
Q ss_pred eeCCCCCCC
Q psy12376 76 VLGKHTKSK 84 (89)
Q Consensus 76 ~l~~h~~~~ 84 (89)
.+-+|++-+
T Consensus 214 ~~~ghtn~v 222 (745)
T KOG0301|consen 214 EMHGHTNFV 222 (745)
T ss_pred eeeccceEE
Confidence 888888643
No 97
>KOG0640|consensus
Probab=99.11 E-value=2.2e-10 Score=76.25 Aligned_cols=76 Identities=11% Similarity=0.247 Sum_probs=65.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec-CCcce-eec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG-KHTNT-IVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~-~h~~~-i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
.|.+.|+++.+|+.|++.++++.||.|++||.-++++++.+. .|.+. |.+ +|+.+.+.|..|++|.+.++.
T Consensus 259 qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R 338 (430)
T KOG0640|consen 259 QHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGR 338 (430)
T ss_pred ccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCc
Confidence 467889999999999999999999999999999999988875 57653 433 899999999999999999887
Q ss_pred EEeee
Q psy12376 73 RVPVL 77 (89)
Q Consensus 73 ~~~~l 77 (89)
.+...
T Consensus 339 ~l~~Y 343 (430)
T KOG0640|consen 339 MLKEY 343 (430)
T ss_pred eEEEE
Confidence 66643
No 98
>KOG1408|consensus
Probab=99.11 E-value=6.9e-11 Score=85.18 Aligned_cols=83 Identities=29% Similarity=0.335 Sum_probs=73.8
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec----------cEEEEEeCCCCEEEEeCCC-CE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG----------QVLAIGTARGNLTVYNHMT-SK 72 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~----------~~las~s~d~~v~iwd~~~-~~ 72 (89)
+..+.+++.||+|++||+|.--|+++||+....+....+..|...|.| ++||+++.|.-|.|||+.. -.
T Consensus 459 r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~ 538 (1080)
T KOG1408|consen 459 RFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYD 538 (1080)
T ss_pred ccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccc
Confidence 456899999999999999999999999999988888888999999998 8999999999999999964 46
Q ss_pred EEeeeCCCCCCCcC
Q psy12376 73 RVPVLGKHTKSKPS 86 (89)
Q Consensus 73 ~~~~l~~h~~~~~~ 86 (89)
.++++.+|+..+-+
T Consensus 539 l~qtld~HSssITs 552 (1080)
T KOG1408|consen 539 LVQTLDGHSSSITS 552 (1080)
T ss_pred hhhhhcccccceeE
Confidence 77788899887654
No 99
>KOG0294|consensus
Probab=99.10 E-value=6.1e-10 Score=73.89 Aligned_cols=75 Identities=13% Similarity=0.092 Sum_probs=66.0
Q ss_pred CcCCcEEEEEEccCCC--EEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQ--VLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~--~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
.|.+.|+++.|.+... +|++|++||.|.+|+....+.+..+.+|++.|+. ++..+.+.|+.++.||+-.|+
T Consensus 81 ~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr 160 (362)
T KOG0294|consen 81 SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGR 160 (362)
T ss_pred ccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCc
Confidence 4678899999999875 9999999999999999999999999999998876 788888999999999997766
Q ss_pred EEee
Q psy12376 73 RVPV 76 (89)
Q Consensus 73 ~~~~ 76 (89)
.-..
T Consensus 161 ~a~v 164 (362)
T KOG0294|consen 161 VAFV 164 (362)
T ss_pred ccee
Confidence 5443
No 100
>KOG0302|consensus
Probab=99.10 E-value=3.7e-10 Score=76.34 Aligned_cols=67 Identities=16% Similarity=0.287 Sum_probs=59.6
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC---CeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT---SKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~---~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~ 69 (89)
|...|..+.|+-.-.+||+|++||.+.|||+++ ++.+..+.-|+.+|.+ ..|+++|.|..|.|||+.
T Consensus 301 h~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 301 HNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred cCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 455689999999888999999999999999986 5567889899999998 688999999999999994
No 101
>KOG2096|consensus
Probab=99.09 E-value=7.6e-10 Score=73.83 Aligned_cols=35 Identities=11% Similarity=0.057 Sum_probs=32.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS 36 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~ 36 (89)
+|.+.|++++||.||++||+.+.|+.|++|+.+..
T Consensus 84 gH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF 118 (420)
T KOG2096|consen 84 GHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDF 118 (420)
T ss_pred ccCCceeeeEEcCCCceeEEEeCCceEEEEecchh
Confidence 57889999999999999999999999999998864
No 102
>KOG1310|consensus
Probab=99.09 E-value=2.5e-10 Score=80.37 Aligned_cols=69 Identities=17% Similarity=0.268 Sum_probs=62.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe-cCCcceeec---------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL-GKHTNTIVG---------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~-~~h~~~i~~---------~~las~s~d~~v~iwd~~~ 70 (89)
+|.+-|.+++|+.||.+|++|++|-.+.|||....|.+..+ ++|...|.| .++++|..|..|+++|+.+
T Consensus 48 GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~ 126 (758)
T KOG1310|consen 48 GHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDS 126 (758)
T ss_pred cccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccc
Confidence 67888999999999999999999999999999887777766 589888877 7999999999999999973
No 103
>KOG0313|consensus
Probab=99.09 E-value=3.3e-10 Score=76.47 Aligned_cols=68 Identities=12% Similarity=0.304 Sum_probs=60.9
Q ss_pred CCcCCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCe-EeeEecCCcceeec------cEEEEEeCCCCEEEEeC
Q psy12376 1 MNLRYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSK-RVPVLGKHTNTIVG------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~-~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~ 68 (89)
++|...|+++.|+|... +|++|+.|+++++||.|+-+ .+..+.+|.+.|.+ .++++||.|.+|+|+.-
T Consensus 342 ~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 342 IGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred ecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCCceEEeccCcceEEEecc
Confidence 57888999999999664 88999999999999999866 78889999999988 69999999999999865
No 104
>KOG0267|consensus
Probab=99.09 E-value=4e-11 Score=85.92 Aligned_cols=85 Identities=21% Similarity=0.253 Sum_probs=75.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|..+|.++.|+++...|++|+.+|+|++||+..++.++.+.+|...+.. .|+|+|+.|..+.+||++-..+.
T Consensus 68 ~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~ 147 (825)
T KOG0267|consen 68 GHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCS 147 (825)
T ss_pred ccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCce
Confidence 46778999999999999999999999999999999999999999876654 78999999999999999877788
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
+..++|+..+.+
T Consensus 148 ~~~~s~~~vv~~ 159 (825)
T KOG0267|consen 148 HTYKSHTRVVDV 159 (825)
T ss_pred eeecCCcceeEE
Confidence 888888876554
No 105
>KOG1034|consensus
Probab=99.07 E-value=9.8e-10 Score=73.31 Aligned_cols=85 Identities=19% Similarity=0.171 Sum_probs=72.4
Q ss_pred cCCcEEEEEEccCC----CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 3 LRYYIFLLQTSQVG----QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 3 ~~~~i~~~~~spdg----~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
++...+-++|+-|- .++|+|+.-|.|+|.|..+++....+.+|...|+. +++.+||.|.+|++||+++
T Consensus 88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~ 167 (385)
T KOG1034|consen 88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQT 167 (385)
T ss_pred CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccC
Confidence 34457788898653 48999999999999999999888899999998876 7999999999999999999
Q ss_pred CEEEeeeC---CCCCCCcCC
Q psy12376 71 SKRVPVLG---KHTKSKPST 87 (89)
Q Consensus 71 ~~~~~~l~---~h~~~~~~~ 87 (89)
..++..++ +|...+.|.
T Consensus 168 ~~Cv~VfGG~egHrdeVLSv 187 (385)
T KOG1034|consen 168 DVCVAVFGGVEGHRDEVLSV 187 (385)
T ss_pred CeEEEEecccccccCcEEEE
Confidence 99998874 777776654
No 106
>KOG0291|consensus
Probab=99.06 E-value=1.9e-09 Score=77.91 Aligned_cols=80 Identities=23% Similarity=0.370 Sum_probs=72.6
Q ss_pred CcEEEEEEccCCCEEEEEeCC-CcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 5 YYIFLLQTSQVGQVLAIGTAR-GNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~-g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
.+|..++|+..|..||.|+.. |.+.||+-++...+-+.++|-..+.| +++|+|++||.|+|||..++-+..+
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vT 387 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVT 387 (893)
T ss_pred ceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEE
Confidence 468899999999999999874 89999999887788888999999888 7999999999999999999999999
Q ss_pred eCCCCCCC
Q psy12376 77 LGKHTKSK 84 (89)
Q Consensus 77 l~~h~~~~ 84 (89)
+--|+..+
T Consensus 388 FteHts~V 395 (893)
T KOG0291|consen 388 FTEHTSGV 395 (893)
T ss_pred eccCCCce
Confidence 99998764
No 107
>KOG1007|consensus
Probab=99.05 E-value=6.1e-10 Score=73.45 Aligned_cols=78 Identities=19% Similarity=0.213 Sum_probs=62.3
Q ss_pred cCCcEEEEEEcc--CCCEEEEEeCCCcEEEEeCCCCeEeeEec-CCcceeec--------cEEEEEeCCCCEEEEeCC-C
Q psy12376 3 LRYYIFLLQTSQ--VGQVLAIGTARGNLTVYNHMTSKRVPVLG-KHTNTIVG--------QVLAIGTARGNLTVYNHM-T 70 (89)
Q Consensus 3 ~~~~i~~~~~sp--dg~~la~g~~~g~v~iwd~~~~~~~~~~~-~h~~~i~~--------~~las~s~d~~v~iwd~~-~ 70 (89)
++...++-+||| ||+++++ +.++++..||.++.++...+. .|...++. .+||+|++|+.|+|||.+ +
T Consensus 169 ~~~~ftsg~WspHHdgnqv~t-t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~t 247 (370)
T KOG1007|consen 169 MRHSFTSGAWSPHHDGNQVAT-TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKT 247 (370)
T ss_pred ccceecccccCCCCccceEEE-eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCC
Confidence 455688889998 7888777 458899999999877666654 57666665 689999999999999997 5
Q ss_pred CEEEeeeCCCC
Q psy12376 71 SKRVPVLGKHT 81 (89)
Q Consensus 71 ~~~~~~l~~h~ 81 (89)
...++.+.+|+
T Consensus 248 k~pv~el~~Hs 258 (370)
T KOG1007|consen 248 KFPVQELPGHS 258 (370)
T ss_pred CccccccCCCc
Confidence 56667777776
No 108
>KOG1036|consensus
Probab=99.05 E-value=1e-09 Score=72.39 Aligned_cols=82 Identities=17% Similarity=0.238 Sum_probs=67.0
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.+.|+.+.|+|.+..|+++++||++++||.........+ .|+.++.+ ..+++|+-||.|+.+|+.++.. ..+
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~-~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~-~~i 90 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKF-KHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNE-DQI 90 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhe-ecCCceeeeeccCCceEEEeccCceEEEEEecCCcc-eee
Confidence 467999999999999999999999999999876433333 57777765 6899999999999999987655 557
Q ss_pred CCCCCCCcCC
Q psy12376 78 GKHTKSKPST 87 (89)
Q Consensus 78 ~~h~~~~~~~ 87 (89)
+.|...+.+.
T Consensus 91 gth~~~i~ci 100 (323)
T KOG1036|consen 91 GTHDEGIRCI 100 (323)
T ss_pred ccCCCceEEE
Confidence 8888877654
No 109
>KOG0278|consensus
Probab=99.04 E-value=8.6e-10 Score=71.65 Aligned_cols=72 Identities=10% Similarity=0.152 Sum_probs=63.9
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe-cCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL-GKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~-~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
++-.|.+.+.+|+-.++++|..|..++.||..+|+.+..+ .+|-++|.| ...|+||+||+|+||....++..
T Consensus 223 ~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 223 MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 3456889999999999999999999999999999988886 789999998 78999999999999998765543
No 110
>KOG0303|consensus
Probab=99.04 E-value=1.2e-09 Score=74.31 Aligned_cols=83 Identities=17% Similarity=0.191 Sum_probs=71.9
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|...|-.++|+|.. +.|++++.|.+|.+||..+|+.+-.+. |.+-|.+ .+|+++..|..|+|||.++++.
T Consensus 129 gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~ 207 (472)
T KOG0303|consen 129 GHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTV 207 (472)
T ss_pred ecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcE
Confidence 466678889999975 589999999999999999999877776 8887776 8999999999999999999999
Q ss_pred EeeeCCCCCCCc
Q psy12376 74 VPVLGKHTKSKP 85 (89)
Q Consensus 74 ~~~l~~h~~~~~ 85 (89)
+..-.+|.+..+
T Consensus 208 v~e~~~heG~k~ 219 (472)
T KOG0303|consen 208 VSEGVAHEGAKP 219 (472)
T ss_pred eeecccccCCCc
Confidence 988778876644
No 111
>KOG0772|consensus
Probab=99.03 E-value=3.5e-10 Score=78.97 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=53.8
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE--e-eEecCCcc--eeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR--V-PVLGKHTN--TIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~--~-~~~~~h~~--~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
=+++.|+|+|||+.||+|+.||.|.+|+..+.-. . ..-..|.. .|.| ++|+|-|.|.++++||++.
T Consensus 318 v~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq 395 (641)
T KOG0772|consen 318 VPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQ 395 (641)
T ss_pred cCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccc
Confidence 3588999999999999999999999999754222 1 22246766 6666 8999999999999999975
No 112
>KOG0643|consensus
Probab=99.03 E-value=2.5e-09 Score=69.90 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=63.8
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE-eeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR-VPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~-~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
.+.++.+-|+|.+++|++|..||.|.+||+++|+. +...+.|...|+. .+++++|.|.+..+||+++-++++
T Consensus 147 ~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~K 226 (327)
T KOG0643|consen 147 DSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLK 226 (327)
T ss_pred ccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEE
Confidence 35699999999999999999999999999999854 4444668777776 899999999999999999888777
Q ss_pred ee
Q psy12376 76 VL 77 (89)
Q Consensus 76 ~l 77 (89)
+.
T Consensus 227 ty 228 (327)
T KOG0643|consen 227 TY 228 (327)
T ss_pred Ee
Confidence 54
No 113
>KOG0299|consensus
Probab=99.03 E-value=9.3e-10 Score=75.62 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=72.3
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEee----E------------e--cCCcceeec-------cEEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVP----V------------L--GKHTNTIVG-------QVLAI 56 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~----~------------~--~~h~~~i~~-------~~las 56 (89)
+|.-++++++++||.++..+++.+|+|.=|++.+|+..+ . . ..|.+.+.+ +|||+
T Consensus 140 ~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylat 219 (479)
T KOG0299|consen 140 KHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLAT 219 (479)
T ss_pred cccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEe
Confidence 467789999999999999999999999999999887431 1 0 134454444 89999
Q ss_pred EeCCCCEEEEeCCCCEEEeeeCCCCCCCcCC
Q psy12376 57 GTARGNLTVYNHMTSKRVPVLGKHTKSKPST 87 (89)
Q Consensus 57 ~s~d~~v~iwd~~~~~~~~~l~~h~~~~~~~ 87 (89)
|+.|..|.||+.++.+.++.+.+|.+.|++.
T Consensus 220 gg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L 250 (479)
T KOG0299|consen 220 GGRDRHVQIWDCDTLEHVKVFKGHRGAVSSL 250 (479)
T ss_pred cCCCceEEEecCcccchhhcccccccceeee
Confidence 9999999999999999999999999998764
No 114
>KOG0644|consensus
Probab=99.03 E-value=1.2e-10 Score=84.77 Aligned_cols=83 Identities=16% Similarity=0.244 Sum_probs=77.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...|+|+.|.-.|.++.+|++|-.++||.+.+++++..+.||.+.|+. .++|++|.|.-|++|.+.++..+
T Consensus 188 gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pv 267 (1113)
T KOG0644|consen 188 GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPV 267 (1113)
T ss_pred hhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchH
Confidence 67888999999999999999999999999999999999999999998887 68999999999999999999999
Q ss_pred eeeCCCCCCC
Q psy12376 75 PVLGKHTKSK 84 (89)
Q Consensus 75 ~~l~~h~~~~ 84 (89)
..+.+|++.+
T Consensus 268 svLrghtgav 277 (1113)
T KOG0644|consen 268 SVLRGHTGAV 277 (1113)
T ss_pred HHHhccccce
Confidence 9999999664
No 115
>KOG1034|consensus
Probab=99.03 E-value=9.4e-10 Score=73.37 Aligned_cols=71 Identities=14% Similarity=0.151 Sum_probs=62.3
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEeeEec---CCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKRVPVLG---KHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~~~~~~---~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
+|...|..+.|+|+. +++++++.|..|++|++++..++..+. +|.+.|.+ .+|+|++.|.++++|++..
T Consensus 133 ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~ 212 (385)
T KOG1034|consen 133 GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNV 212 (385)
T ss_pred ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecCh
Confidence 577889999999976 588999999999999999999988875 58888876 8999999999999999974
Q ss_pred CE
Q psy12376 71 SK 72 (89)
Q Consensus 71 ~~ 72 (89)
.+
T Consensus 213 ~~ 214 (385)
T KOG1034|consen 213 KE 214 (385)
T ss_pred hH
Confidence 33
No 116
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.02 E-value=1.4e-09 Score=51.19 Aligned_cols=31 Identities=26% Similarity=0.343 Sum_probs=29.3
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYN 32 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd 32 (89)
+|.++|++++|+|++.+|++++.|+.|++||
T Consensus 9 ~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 9 GHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp SSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 4778999999999999999999999999997
No 117
>KOG0646|consensus
Probab=99.01 E-value=2.6e-09 Score=73.56 Aligned_cols=72 Identities=17% Similarity=0.207 Sum_probs=61.3
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCC---------CeEeeEecCCcceeec---------cEEEEEeCCCCEEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMT---------SKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVY 66 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~---------~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iw 66 (89)
-.|+|+.|+-||.+|++|+.||.|.+|.+.. -+.++.+..|+-+|.+ .+++|+|.|.++++|
T Consensus 124 Q~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~w 203 (476)
T KOG0646|consen 124 QSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLW 203 (476)
T ss_pred cceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEE
Confidence 3599999999999999999999999998643 1345677789888876 799999999999999
Q ss_pred eCCCCEEEee
Q psy12376 67 NHMTSKRVPV 76 (89)
Q Consensus 67 d~~~~~~~~~ 76 (89)
|+..+..+..
T Consensus 204 dlS~g~LLlt 213 (476)
T KOG0646|consen 204 DLSLGVLLLT 213 (476)
T ss_pred EeccceeeEE
Confidence 9988876654
No 118
>KOG1407|consensus
Probab=99.01 E-value=1.2e-09 Score=71.12 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=61.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE--ecCCcceee---c-----cEEEEEeCCCCEEEEeCCCCE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV--LGKHTNTIV---G-----QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~--~~~h~~~i~---~-----~~las~s~d~~v~iwd~~~~~ 72 (89)
|..++-+++|..+|..||+|+-|+++.+|++...+.... ..+|.+.+. + .+|++++.|.+|++||++.++
T Consensus 19 ~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k 98 (313)
T KOG1407|consen 19 HVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGK 98 (313)
T ss_pred hhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCc
Confidence 455789999999999999999999999999987655443 346765443 2 899999999999999999988
Q ss_pred EEeee
Q psy12376 73 RVPVL 77 (89)
Q Consensus 73 ~~~~l 77 (89)
+....
T Consensus 99 ~~~~i 103 (313)
T KOG1407|consen 99 CTARI 103 (313)
T ss_pred EEEEe
Confidence 87654
No 119
>KOG4283|consensus
Probab=99.01 E-value=2.5e-09 Score=70.86 Aligned_cols=87 Identities=20% Similarity=0.306 Sum_probs=71.4
Q ss_pred CcCCcEEEEEEccCC---CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVG---QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg---~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
++++.|+.-+|||-. ..+|+|+.+-.|++-|+.+|..-..+.+|.+.|.+ =.|++||.||.+++||++.
T Consensus 141 ~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRr 220 (397)
T KOG4283|consen 141 KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRR 220 (397)
T ss_pred ecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeec
Confidence 356778999999954 37788888999999999999999999999998887 4799999999999999975
Q ss_pred C-EEEeeeCCCC-CCCcCCC
Q psy12376 71 S-KRVPVLGKHT-KSKPSTE 88 (89)
Q Consensus 71 ~-~~~~~l~~h~-~~~~~~~ 88 (89)
. .+...|..|. ++.++.|
T Consensus 221 asgcf~~lD~hn~k~~p~~~ 240 (397)
T KOG4283|consen 221 ASGCFRVLDQHNTKRPPILK 240 (397)
T ss_pred ccceeEEeecccCccCcccc
Confidence 4 6777787777 3344433
No 120
>KOG0646|consensus
Probab=99.00 E-value=6.6e-10 Score=76.41 Aligned_cols=67 Identities=25% Similarity=0.344 Sum_probs=61.9
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
.++++.+++-+|+|.+|+.|+..|.+++|.+.+|+.+..+.+|=..|+| .+|+|||.||.|.+|.+-
T Consensus 80 ~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~ 153 (476)
T KOG0646|consen 80 LPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLT 153 (476)
T ss_pred cccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEE
Confidence 4678999999999999999999999999999999999988888778887 899999999999999973
No 121
>KOG1332|consensus
Probab=98.99 E-value=7.6e-10 Score=71.52 Aligned_cols=85 Identities=18% Similarity=0.229 Sum_probs=67.5
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC---eEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS---KRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~---~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~ 70 (89)
|.|-|-.+...--|+.||+++.|++|+||..+++ +.+..+.+|.+|+.- .+|||++.||.|.||.-+.
T Consensus 10 H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~ 89 (299)
T KOG1332|consen 10 HEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEEN 89 (299)
T ss_pred hhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCC
Confidence 4444555566667899999999999999999763 467789999999875 8999999999999999987
Q ss_pred CEEEe--eeCCCCCCCcCC
Q psy12376 71 SKRVP--VLGKHTKSKPST 87 (89)
Q Consensus 71 ~~~~~--~l~~h~~~~~~~ 87 (89)
+.-.+ ....|+.++++.
T Consensus 90 g~w~k~~e~~~h~~SVNsV 108 (299)
T KOG1332|consen 90 GRWTKAYEHAAHSASVNSV 108 (299)
T ss_pred Cchhhhhhhhhhcccceee
Confidence 75433 345788777765
No 122
>KOG0301|consensus
Probab=98.98 E-value=5.6e-09 Score=74.77 Aligned_cols=66 Identities=9% Similarity=0.109 Sum_probs=59.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
+|.|.|..+++=|++ .|++++.||.|++|+. +|+++..+.+|+..+.+ ..++|+++|++++||+..
T Consensus 177 gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 177 GHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred cchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence 588999999998885 6688899999999999 78899999999998876 799999999999999986
No 123
>KOG1332|consensus
Probab=98.97 E-value=3.1e-09 Score=68.71 Aligned_cols=86 Identities=14% Similarity=0.194 Sum_probs=68.1
Q ss_pred CcCCcEEEEEEcc--CCCEEEEEeCCCcEEEEeCCCCeE--eeEecCCcceeec---------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQ--VGQVLAIGTARGNLTVYNHMTSKR--VPVLGKHTNTIVG---------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~sp--dg~~la~g~~~g~v~iwd~~~~~~--~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~ 68 (89)
+|.++++.++|-. -|.+||+++.||+|.||.-.+|+- ......|...+++ -.||+|+.||.|.|.+.
T Consensus 54 Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~ 133 (299)
T KOG1332|consen 54 GHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTY 133 (299)
T ss_pred CCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEE
Confidence 6889999999987 899999999999999999887743 3345678887777 68999999999999998
Q ss_pred CCC-E--EEeeeCCCCCCCcCC
Q psy12376 69 MTS-K--RVPVLGKHTKSKPST 87 (89)
Q Consensus 69 ~~~-~--~~~~l~~h~~~~~~~ 87 (89)
++. . .......|+-.++++
T Consensus 134 ~~~g~w~t~ki~~aH~~GvnsV 155 (299)
T KOG1332|consen 134 DSSGGWTTSKIVFAHEIGVNSV 155 (299)
T ss_pred cCCCCccchhhhhcccccccee
Confidence 643 2 223446787776654
No 124
>KOG0300|consensus
Probab=98.97 E-value=1.1e-09 Score=73.19 Aligned_cols=82 Identities=11% Similarity=0.151 Sum_probs=68.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC--------------e--------------------------EeeE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS--------------K--------------------------RVPV 41 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~--------------~--------------------------~~~~ 41 (89)
+|.+.+.++.|++++..+++++.|++..||...-. + .+..
T Consensus 188 GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ 267 (481)
T KOG0300|consen 188 GHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMR 267 (481)
T ss_pred ccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeee
Confidence 67889999999999999999999999999982210 0 0334
Q ss_pred ecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCCC
Q psy12376 42 LGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLGKHTKS 83 (89)
Q Consensus 42 ~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~~h~~~ 83 (89)
+.+|...|.| +.++++|.|.+..+||+++++.++.|-+|...
T Consensus 268 ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~E 316 (481)
T KOG0300|consen 268 LTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSE 316 (481)
T ss_pred eeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchh
Confidence 6778887776 89999999999999999999999999888753
No 125
>KOG2048|consensus
Probab=98.97 E-value=2.4e-09 Score=76.37 Aligned_cols=81 Identities=12% Similarity=0.291 Sum_probs=63.5
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec----C-Cc-c--eeec------cEEEEEeCCCCEEEEeCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG----K-HT-N--TIVG------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~----~-h~-~--~i~~------~~las~s~d~~v~iwd~~ 69 (89)
+..+.+++|+|++..||+|+.||.|++||...+..+.... + -+ . .|.+ ..||+|..-|+|.+||..
T Consensus 154 ~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~ 233 (691)
T KOG2048|consen 154 KSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSI 233 (691)
T ss_pred cceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEccc
Confidence 3568999999999999999999999999999887655221 1 11 1 1222 899999999999999999
Q ss_pred CCEEEeeeCCCCCCC
Q psy12376 70 TSKRVPVLGKHTKSK 84 (89)
Q Consensus 70 ~~~~~~~l~~h~~~~ 84 (89)
.+.+++....|.+.+
T Consensus 234 ~gTLiqS~~~h~adV 248 (691)
T KOG2048|consen 234 FGTLIQSHSCHDADV 248 (691)
T ss_pred Ccchhhhhhhhhcce
Confidence 998877766666544
No 126
>KOG1274|consensus
Probab=98.96 E-value=3.2e-09 Score=77.72 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=70.5
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
..-++.+++|+.+|+++|+|++|-.|++-+..+......+.+|..+|.+ ++||+.+.||.|+|||+.++...+
T Consensus 95 ftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~ 174 (933)
T KOG1274|consen 95 FTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSK 174 (933)
T ss_pred eeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhh
Confidence 4457899999999999999999999999999988888899999999988 899999999999999999988877
Q ss_pred eeCCC
Q psy12376 76 VLGKH 80 (89)
Q Consensus 76 ~l~~h 80 (89)
.+.+-
T Consensus 175 tl~~v 179 (933)
T KOG1274|consen 175 TLTGV 179 (933)
T ss_pred hcccC
Confidence 76543
No 127
>KOG0278|consensus
Probab=98.95 E-value=5e-10 Score=72.74 Aligned_cols=76 Identities=18% Similarity=0.199 Sum_probs=63.8
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe-EeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK-RVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~-~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
|+.-|..++|+.|.++|++|+.+..++|||...-+ ....+.+|.+.|+. +.|.|.++|++|++||.+++..+
T Consensus 99 hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v 178 (334)
T KOG0278|consen 99 HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEV 178 (334)
T ss_pred hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEE
Confidence 55568899999999999999999999999986533 45567789887764 66777799999999999999988
Q ss_pred eeeC
Q psy12376 75 PVLG 78 (89)
Q Consensus 75 ~~l~ 78 (89)
+.|.
T Consensus 179 ~sL~ 182 (334)
T KOG0278|consen 179 QSLE 182 (334)
T ss_pred EEEe
Confidence 8764
No 128
>KOG2394|consensus
Probab=98.94 E-value=4.5e-09 Score=73.76 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=59.8
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec---------------------------------
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------------------------------- 51 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------------------------------- 51 (89)
..+.|++|||||++||+|+.|--|.||.....+.+..-++|+++|..
T Consensus 333 GGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r 412 (636)
T KOG2394|consen 333 GGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIR 412 (636)
T ss_pred cceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecccccccccccccccccccccchhcccccc
Confidence 35889999999999999999999999999999988887778765532
Q ss_pred ----------------------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 52 ----------------------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 52 ----------------------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
-.|.+.+.|..+.+||+......+
T Consensus 413 ~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlcLWDlteD~L~~ 458 (636)
T KOG2394|consen 413 ANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLCLWDLTEDVLVP 458 (636)
T ss_pred cCCCCCcCCCcccccccccceEEEeecccccceEEEEecchhhccc
Confidence 268899999999999997655443
No 129
>KOG1445|consensus
Probab=98.93 E-value=5.4e-10 Score=79.93 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=67.0
Q ss_pred cEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeE-------eeEecCCcceeec--------cEEEEEeCCCCEEEEeCC
Q psy12376 6 YIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKR-------VPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 6 ~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~-------~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~ 69 (89)
-|+.+.|.| |.+.||.+++||.|++|.+..+.. -..+..|...|.+ +.|++++.|.+|++||++
T Consensus 629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~ 708 (1012)
T KOG1445|consen 629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLA 708 (1012)
T ss_pred eeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehh
Confidence 489999999 778999999999999999865422 3356678877766 889999999999999999
Q ss_pred CCEEEeeeCCCCCCC
Q psy12376 70 TSKRVPVLGKHTKSK 84 (89)
Q Consensus 70 ~~~~~~~l~~h~~~~ 84 (89)
+++....+.+|+..+
T Consensus 709 ~~~~~~~l~gHtdqI 723 (1012)
T KOG1445|consen 709 NAKLYSRLVGHTDQI 723 (1012)
T ss_pred hhhhhheeccCcCce
Confidence 998888999998764
No 130
>KOG0268|consensus
Probab=98.92 E-value=1.3e-09 Score=73.53 Aligned_cols=69 Identities=12% Similarity=0.143 Sum_probs=63.2
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~ 70 (89)
+|+|.|.|++=+|.. ..+|+|+.||.|++||+.+-++...++.|.+.|.. ..++++++|.+|+.|-++.
T Consensus 64 gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~ 138 (433)
T KOG0268|consen 64 GHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDG 138 (433)
T ss_pred ccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCcceeeeeccC
Confidence 688999999999987 68999999999999999998889999999998876 7899999999999999754
No 131
>KOG0270|consensus
Probab=98.91 E-value=1.2e-09 Score=74.77 Aligned_cols=69 Identities=19% Similarity=0.225 Sum_probs=61.6
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
+|++.+.+++|.-.- ..||+|+.|.+|.+||+.+|++...+.-|.+.|.+ .+|.+|+.|++|.+.|.+.
T Consensus 241 gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 241 GHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred cchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 477778888998754 58999999999999999999998888888898887 7999999999999999983
No 132
>KOG0288|consensus
Probab=98.91 E-value=7.7e-10 Score=75.39 Aligned_cols=72 Identities=13% Similarity=0.151 Sum_probs=63.9
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
+.|+.+.|.++++++++.+.|+.+++|+..+++...++.+|++.|.+ ..+++|+.|.++.+||+..+.+.+.
T Consensus 220 g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt 298 (459)
T KOG0288|consen 220 GNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKT 298 (459)
T ss_pred CCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecc
Confidence 46999999999999999999999999999999999999999999988 3489999999999999976665543
No 133
>KOG3914|consensus
Probab=98.90 E-value=3.4e-09 Score=71.81 Aligned_cols=77 Identities=10% Similarity=0.089 Sum_probs=60.9
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE-ecCCcceeec------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV-LGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~-~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~ 73 (89)
|+|-.-++.++||||+++|.++..|.+|++-....--.+.. +-||+..|.. ..|.|+|.|++|++||+.+|+.
T Consensus 148 lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~ 227 (390)
T KOG3914|consen 148 LGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKL 227 (390)
T ss_pred hhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEecccCCc
Confidence 45666689999999999999999999999977643223333 3368776654 5679999999999999999988
Q ss_pred Eeee
Q psy12376 74 VPVL 77 (89)
Q Consensus 74 ~~~l 77 (89)
.+.+
T Consensus 228 L~t~ 231 (390)
T KOG3914|consen 228 LDTC 231 (390)
T ss_pred cccc
Confidence 7654
No 134
>KOG2110|consensus
Probab=98.90 E-value=2e-08 Score=67.74 Aligned_cols=70 Identities=16% Similarity=0.226 Sum_probs=59.1
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCC-cEEEEeCCCCeEeeEecCCcceee--c-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARG-NLTVYNHMTSKRVPVLGKHTNTIV--G-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g-~v~iwd~~~~~~~~~~~~h~~~i~--~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
|++++.+++|+|+|.+||++++.| .|+||.+.+|+.+.++.....+++ + .+|++.|+.++|+|+.++...
T Consensus 172 H~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 172 HKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred cCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence 778899999999999999999999 689999999999888864333332 1 899999999999999996543
No 135
>KOG0269|consensus
Probab=98.89 E-value=2.5e-09 Score=77.30 Aligned_cols=84 Identities=13% Similarity=0.150 Sum_probs=68.4
Q ss_pred cCCcEEEEEEccC-CCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC-CE
Q psy12376 3 LRYYIFLLQTSQV-GQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT-SK 72 (89)
Q Consensus 3 ~~~~i~~~~~spd-g~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~-~~ 72 (89)
|...+.++.|++. -.+|++|+.||.|++||++..+....+.+....|++ .+|+++.+.|.|++||++. .+
T Consensus 132 H~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r 211 (839)
T KOG0269|consen 132 HERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR 211 (839)
T ss_pred hccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchh
Confidence 5567899999995 468899999999999999987776666665555555 7999999999999999974 56
Q ss_pred EEeeeCCCCCCCcC
Q psy12376 73 RVPVLGKHTKSKPS 86 (89)
Q Consensus 73 ~~~~l~~h~~~~~~ 86 (89)
.+..+-+|.+.+.+
T Consensus 212 ~~~k~~AH~GpV~c 225 (839)
T KOG0269|consen 212 CEKKLTAHNGPVLC 225 (839)
T ss_pred HHHHhhcccCceEE
Confidence 66777888887654
No 136
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.88 E-value=8.5e-08 Score=60.21 Aligned_cols=74 Identities=20% Similarity=0.290 Sum_probs=53.2
Q ss_pred CCcEEEEEEccCCCEEEEE--eCCCcEEEEeCCCCeEeeEecCCc-ceeec----cEEEEEeCC---CCEEEEeCCCCEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIG--TARGNLTVYNHMTSKRVPVLGKHT-NTIVG----QVLAIGTAR---GNLTVYNHMTSKR 73 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g--~~~g~v~iwd~~~~~~~~~~~~h~-~~i~~----~~las~s~d---~~v~iwd~~~~~~ 73 (89)
..+|..++|+|+|+.||+. ..++.|.+||.+ ++.+..+.... ..|.- ++|+.|+.+ |.|.+||+++.+.
T Consensus 59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~ 137 (194)
T PF08662_consen 59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK 137 (194)
T ss_pred CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEE
Confidence 3469999999999987654 356799999997 56666665322 22221 788888754 5699999998777
Q ss_pred EeeeC
Q psy12376 74 VPVLG 78 (89)
Q Consensus 74 ~~~l~ 78 (89)
+....
T Consensus 138 i~~~~ 142 (194)
T PF08662_consen 138 ISTFE 142 (194)
T ss_pred eeccc
Confidence 76543
No 137
>KOG0308|consensus
Probab=98.87 E-value=1.5e-08 Score=72.39 Aligned_cols=70 Identities=11% Similarity=0.139 Sum_probs=65.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
+|++.|.++-.++||..+++++.||+|++||....+++..+..|+..+.+ ..+.+|+.|+.|+.=|+++.
T Consensus 211 GHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 211 GHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred ccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 68899999999999999999999999999999999999999999988876 89999999999999999863
No 138
>KOG0288|consensus
Probab=98.87 E-value=2.5e-08 Score=68.20 Aligned_cols=75 Identities=20% Similarity=0.193 Sum_probs=62.2
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc--------eeec---cEEEEEeCCCCEEEEeCCCCE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN--------TIVG---QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~--------~i~~---~~las~s~d~~v~iwd~~~~~ 72 (89)
...|+++..+++|..|.+.+-|.++.+.|.++.+....+..... .+.+ .|+|+||.||.|+||++.+++
T Consensus 341 gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgK 420 (459)
T KOG0288|consen 341 GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGK 420 (459)
T ss_pred CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCce
Confidence 45799999999999999999999999999999887766653211 1112 899999999999999999999
Q ss_pred EEeeeC
Q psy12376 73 RVPVLG 78 (89)
Q Consensus 73 ~~~~l~ 78 (89)
++..+.
T Consensus 421 lE~~l~ 426 (459)
T KOG0288|consen 421 LEKVLS 426 (459)
T ss_pred EEEEec
Confidence 988764
No 139
>KOG1036|consensus
Probab=98.86 E-value=1.8e-08 Score=66.66 Aligned_cols=67 Identities=12% Similarity=0.164 Sum_probs=58.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
.|..++.+++|.++ ..+++|+-||.|+++|..++. ...++.|..+++| +.+++||.|++|++||.+.
T Consensus 52 ~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~-~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~ 125 (323)
T KOG1036|consen 52 KHGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGN-EDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN 125 (323)
T ss_pred ecCCceeeeeccCC-ceEEEeccCceEEEEEecCCc-ceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccc
Confidence 46788999999985 688999999999999998875 3567789999998 7899999999999999985
No 140
>KOG2394|consensus
Probab=98.86 E-value=5.1e-09 Score=73.49 Aligned_cols=79 Identities=18% Similarity=0.148 Sum_probs=65.5
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+.|...+|||||++||+-+.||-++|||-.+.+.+..+..+=+.+.| +||++|++|--|.||.+..++++..=
T Consensus 291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARG 370 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARG 370 (636)
T ss_pred ccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEec
Confidence 35788999999999999999999999998887665555444344444 99999999999999999999998887
Q ss_pred CCCCCC
Q psy12376 78 GKHTKS 83 (89)
Q Consensus 78 ~~h~~~ 83 (89)
.+|..=
T Consensus 371 qGHkSW 376 (636)
T KOG2394|consen 371 QGHKSW 376 (636)
T ss_pred cccccc
Confidence 777643
No 141
>KOG1063|consensus
Probab=98.85 E-value=1.7e-08 Score=72.42 Aligned_cols=70 Identities=16% Similarity=0.174 Sum_probs=58.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE----eeEecCCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR----VPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~----~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
.|.-.|+-++|||||++|++.+.|-++.+|....... ......|+..|.+ .+|||+|+|++|.+|....
T Consensus 570 ~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~ 649 (764)
T KOG1063|consen 570 GHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPD 649 (764)
T ss_pred ccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccC
Confidence 4566799999999999999999999999999754322 2346679888876 7899999999999999976
Q ss_pred C
Q psy12376 71 S 71 (89)
Q Consensus 71 ~ 71 (89)
.
T Consensus 650 ~ 650 (764)
T KOG1063|consen 650 L 650 (764)
T ss_pred c
Confidence 5
No 142
>KOG0322|consensus
Probab=98.85 E-value=3.3e-09 Score=69.22 Aligned_cols=62 Identities=16% Similarity=0.282 Sum_probs=58.6
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~ 68 (89)
+..+..-||++.||++++||.++||+-++...+..+.-|...+++ +++|+||.|+.|.+|++
T Consensus 254 v~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 254 VSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 788999999999999999999999999999999999999998887 89999999999999986
No 143
>KOG1539|consensus
Probab=98.82 E-value=3.2e-08 Score=72.24 Aligned_cols=69 Identities=12% Similarity=0.065 Sum_probs=55.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcce--eec----cEEEEEeCC-CCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNT--IVG----QVLAIGTAR-GNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~--i~~----~~las~s~d-~~v~iwd~~~ 70 (89)
+|.+.|+.++|||||++|++++.|++|++||+.++.++-.+.--.-+ +.. .+||++..| ..|++|.-.+
T Consensus 574 gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNks 649 (910)
T KOG1539|consen 574 GHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNKS 649 (910)
T ss_pred ccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEecCceEEEEEchh
Confidence 58899999999999999999999999999999999876554322111 111 899999888 7899998654
No 144
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.82 E-value=1.4e-07 Score=61.25 Aligned_cols=82 Identities=24% Similarity=0.412 Sum_probs=68.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeC-CCcEEEEeCCCCeEeeEecCCcceeec-------c-EEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTA-RGNLTVYNHMTSKRVPVLGKHTNTIVG-------Q-VLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~-~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~-~las~s~d~~v~iwd~~~~~ 72 (89)
.|...+..++|+|++.+++.++. ++.+.+|+...++.+..+.+|...+.+ . ++++++.|+.+.+||...+.
T Consensus 153 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~ 232 (466)
T COG2319 153 GHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGK 232 (466)
T ss_pred cCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCc
Confidence 45677899999999999998885 999999999988888888888888776 3 56666999999999998777
Q ss_pred EEe-eeCCCCCC
Q psy12376 73 RVP-VLGKHTKS 83 (89)
Q Consensus 73 ~~~-~l~~h~~~ 83 (89)
... .+.+|...
T Consensus 233 ~~~~~~~~~~~~ 244 (466)
T COG2319 233 LLRSTLSGHSDS 244 (466)
T ss_pred EEeeecCCCCcc
Confidence 777 67787765
No 145
>KOG0639|consensus
Probab=98.80 E-value=3.5e-08 Score=69.23 Aligned_cols=80 Identities=18% Similarity=0.235 Sum_probs=63.3
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC--eEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS--KRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~--~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~~~~ 73 (89)
..|.++..+|||+.|++|+...++.|||...- +...++.. ....| +..+++-.||.|.|||+++...
T Consensus 466 nyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaelts--sapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~ 543 (705)
T KOG0639|consen 466 NYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTS--SAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTL 543 (705)
T ss_pred cceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCC--cchhhhhhhcCCccceeeeeccCCcEEEEEccccee
Confidence 35889999999999999999999999998652 22222221 11222 7888889999999999999999
Q ss_pred EeeeCCCCCCCcC
Q psy12376 74 VPVLGKHTKSKPS 86 (89)
Q Consensus 74 ~~~l~~h~~~~~~ 86 (89)
+..+.+|+..+++
T Consensus 544 VrqfqGhtDGasc 556 (705)
T KOG0639|consen 544 VRQFQGHTDGASC 556 (705)
T ss_pred eecccCCCCCcee
Confidence 9999999988765
No 146
>KOG0268|consensus
Probab=98.79 E-value=4.7e-09 Score=70.86 Aligned_cols=70 Identities=14% Similarity=0.281 Sum_probs=54.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc---eeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN---TIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~---~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
+|...+..+.|||.|+-|++|+.|.+|+||..+.+..--.+ |+. .|.| +|++|||+|++|++|.-...
T Consensus 270 dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiY--htkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~As 347 (433)
T KOG0268|consen 270 DHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIY--HTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKAS 347 (433)
T ss_pred ccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhh--hHhhhheeeEEEEeccccEEEecCCCcceeeeecchh
Confidence 46667999999999999999999999999999876542221 222 1222 89999999999999997644
Q ss_pred EE
Q psy12376 72 KR 73 (89)
Q Consensus 72 ~~ 73 (89)
+.
T Consensus 348 ek 349 (433)
T KOG0268|consen 348 EK 349 (433)
T ss_pred hh
Confidence 43
No 147
>KOG2445|consensus
Probab=98.77 E-value=3.2e-08 Score=65.73 Aligned_cols=67 Identities=16% Similarity=0.280 Sum_probs=54.6
Q ss_pred CcCCcEEEEEEccC-C---CEEEEEeCCCcEEEEeCCCC--------------------eEeeEecCCcceeec------
Q psy12376 2 NLRYYIFLLQTSQV-G---QVLAIGTARGNLTVYNHMTS--------------------KRVPVLGKHTNTIVG------ 51 (89)
Q Consensus 2 ~~~~~i~~~~~spd-g---~~la~g~~~g~v~iwd~~~~--------------------~~~~~~~~h~~~i~~------ 51 (89)
+|+++|+.++|.|+ | ..||+++.|| |+||++... +.+..+.+|++.+..
T Consensus 221 d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmt 299 (361)
T KOG2445|consen 221 DHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMT 299 (361)
T ss_pred CCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeee
Confidence 67899999999996 3 5889999999 999998741 124456778877654
Q ss_pred -cEEEEEeCCCCEEEEeCC
Q psy12376 52 -QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 52 -~~las~s~d~~v~iwd~~ 69 (89)
..|+|.|.||.|++|.-.
T Consensus 300 GtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 300 GTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred eeEEeecCCCceeeehhhh
Confidence 789999999999999763
No 148
>KOG0641|consensus
Probab=98.77 E-value=7.7e-08 Score=62.13 Aligned_cols=66 Identities=14% Similarity=0.166 Sum_probs=61.8
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
..+.+++..|.|+.||+|-.|....+||++.|+.+..+-+|...|+| .|+.+|+.|..|++-|+..
T Consensus 232 savaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqg 304 (350)
T KOG0641|consen 232 SAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG 304 (350)
T ss_pred ceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeeccc
Confidence 35899999999999999999999999999999999999999999988 7999999999999999863
No 149
>KOG1274|consensus
Probab=98.77 E-value=6.9e-08 Score=70.96 Aligned_cols=37 Identities=14% Similarity=0.255 Sum_probs=34.5
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR 38 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~ 38 (89)
+|..+|.++.|+|.+++||+.+-||+|++||+.++..
T Consensus 136 gh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~ 172 (933)
T KOG1274|consen 136 GHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGIL 172 (933)
T ss_pred ccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchh
Confidence 6788999999999999999999999999999998754
No 150
>KOG4283|consensus
Probab=98.75 E-value=7.7e-08 Score=63.94 Aligned_cols=87 Identities=14% Similarity=0.102 Sum_probs=69.3
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeEecC------C-cceeec--cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPVLGK------H-TNTIVG--QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~~~~------h-~~~i~~--~~las~s~d~~v~iwd~~~~ 71 (89)
.|+-.|+.+.|-| |--+|.+++=|..+++||..+.+..-.+.- | =+++.. .++|+|.+|-.|++-|+.+|
T Consensus 99 ~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG 178 (397)
T KOG4283|consen 99 GHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG 178 (397)
T ss_pred cceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCC
Confidence 3566799999999 445888999999999999998765544431 1 122222 79999999999999999999
Q ss_pred EEEeeeCCCCCCCcCCC
Q psy12376 72 KRVPVLGKHTKSKPSTE 88 (89)
Q Consensus 72 ~~~~~l~~h~~~~~~~~ 88 (89)
...+.|.+|...+..++
T Consensus 179 s~sH~LsGHr~~vlaV~ 195 (397)
T KOG4283|consen 179 SFSHTLSGHRDGVLAVE 195 (397)
T ss_pred cceeeeccccCceEEEE
Confidence 99999999999887654
No 151
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.75 E-value=1.6e-07 Score=60.38 Aligned_cols=73 Identities=14% Similarity=0.098 Sum_probs=53.5
Q ss_pred cEEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEeeEecCCcceee--c----c-EEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 6 YIFLLQTSQVGQVL-AIGTARGNLTVYNHMTSKRVPVLGKHTNTIV--G----Q-VLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 6 ~i~~~~~spdg~~l-a~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~--~----~-~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.+.+++|+|+|+.+ +++..++.|.+||..+++....+..+..... . + ++++++.|+.+++||+++++.+..+
T Consensus 32 ~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~ 111 (300)
T TIGR03866 32 RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEI 111 (300)
T ss_pred CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEe
Confidence 35679999999976 5677889999999999887776654433211 1 4 4456677899999999887766554
Q ss_pred C
Q psy12376 78 G 78 (89)
Q Consensus 78 ~ 78 (89)
.
T Consensus 112 ~ 112 (300)
T TIGR03866 112 P 112 (300)
T ss_pred e
Confidence 3
No 152
>KOG2055|consensus
Probab=98.75 E-value=7e-08 Score=66.80 Aligned_cols=69 Identities=14% Similarity=0.181 Sum_probs=57.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCC----cceeec----cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKH----TNTIVG----QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h----~~~i~~----~~las~s~d~~v~iwd~~~ 70 (89)
+..+.+..+.|+.||+.|.+.+.+|.|.+||++...+++.+... .-.+.. .|||+||..|-|.|||..+
T Consensus 342 KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 342 KIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred eeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccch
Confidence 45677999999999999999999999999999998888887642 222221 8999999999999999754
No 153
>KOG0290|consensus
Probab=98.75 E-value=4.4e-08 Score=64.81 Aligned_cols=70 Identities=11% Similarity=0.188 Sum_probs=56.2
Q ss_pred CCcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeE-----------------------------------------
Q psy12376 1 MNLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKR----------------------------------------- 38 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~----------------------------------------- 38 (89)
|-|..+|..++|+..+ ..||+.+.||.+++||.+..+-
T Consensus 193 IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLD 272 (364)
T KOG0290|consen 193 IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILD 272 (364)
T ss_pred EecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEE
Confidence 4577889999999966 5899999999999999987421
Q ss_pred -------eeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 39 -------VPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 39 -------~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
+..+++|+..|+. ..|++|++|..+.|||+.+
T Consensus 273 iR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 273 IRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred ecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 2235567666665 7899999999999999964
No 154
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.75 E-value=2.9e-07 Score=57.79 Aligned_cols=69 Identities=14% Similarity=0.235 Sum_probs=51.6
Q ss_pred CcEEEEEEccCCCEEEEEeC---CCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeC------CCCEEEEeCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTA---RGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTA------RGNLTVYNHM 69 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~---~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~------d~~v~iwd~~ 69 (89)
..+..+.|||+|++||+++- .|.+.+||.++.+.+.... |.....+ ++|++++. |+.++||+..
T Consensus 101 ~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 101 QPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred CCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 35778999999999998863 4779999999888776654 3333222 78888764 7899999995
Q ss_pred CCEEEe
Q psy12376 70 TSKRVP 75 (89)
Q Consensus 70 ~~~~~~ 75 (89)
|+.+.
T Consensus 180 -G~~l~ 184 (194)
T PF08662_consen 180 -GRLLY 184 (194)
T ss_pred -CeEeE
Confidence 55444
No 155
>KOG0321|consensus
Probab=98.74 E-value=3.3e-08 Score=70.56 Aligned_cols=72 Identities=17% Similarity=0.220 Sum_probs=61.3
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE--ecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV--LGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~--~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
|.|...|..+.|-|-...|++.+.|.++++||+.+++.... +-+|.+.+.+ ..|++|+.||.+.|||++-
T Consensus 97 ~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~ 176 (720)
T KOG0321|consen 97 LAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRC 176 (720)
T ss_pred ccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEec
Confidence 45777899999999445889999999999999999887765 7889887765 7899999999999999974
Q ss_pred CE
Q psy12376 71 SK 72 (89)
Q Consensus 71 ~~ 72 (89)
..
T Consensus 177 n~ 178 (720)
T KOG0321|consen 177 NG 178 (720)
T ss_pred cc
Confidence 44
No 156
>KOG1538|consensus
Probab=98.72 E-value=4.7e-08 Score=70.61 Aligned_cols=63 Identities=19% Similarity=0.275 Sum_probs=57.2
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
.|..++|-|||..|+.+.. ..+.+||...|..+..+.+|++.|.| +.+|||+.|..|.+|+..
T Consensus 14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k 83 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK 83 (1081)
T ss_pred chheeEECCCCceEEEecC-CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccc
Confidence 4889999999998887654 48999999999999999999999998 899999999999999985
No 157
>KOG1273|consensus
Probab=98.72 E-value=1.5e-07 Score=62.98 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=57.3
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec-----------CCcc--eeec------------------
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG-----------KHTN--TIVG------------------ 51 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~-----------~h~~--~i~~------------------ 51 (89)
|-.+|++++||+||.+|++++.|-.+.+||...|..+..+. +|+. .|.+
T Consensus 64 H~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~ 143 (405)
T KOG1273|consen 64 HVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSV 143 (405)
T ss_pred cccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCceee
Confidence 56689999999999999999999999999998876533211 1110 0000
Q ss_pred ----------------------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 52 ----------------------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 52 ----------------------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+++.+|...|.+.++|.++-+++..+
T Consensus 144 Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~ 191 (405)
T KOG1273|consen 144 LPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASF 191 (405)
T ss_pred ccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeee
Confidence 79999999999999999887776644
No 158
>KOG2111|consensus
Probab=98.72 E-value=1.8e-07 Score=62.29 Aligned_cols=70 Identities=14% Similarity=0.270 Sum_probs=59.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCC-cEEEEeCCCCeEeeEecC--Ccceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARG-NLTVYNHMTSKRVPVLGK--HTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g-~v~iwd~~~~~~~~~~~~--h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
-|...|.|++.+-+|..+|+++..| -|+|||..+|+.+.++.. ....|.| .+||.+|+.|+|.|+.++..
T Consensus 179 AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 179 AHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred cccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecC
Confidence 3677899999999999999999999 589999999998888753 2234555 89999999999999999753
No 159
>KOG1445|consensus
Probab=98.71 E-value=1.1e-08 Score=73.52 Aligned_cols=72 Identities=22% Similarity=0.286 Sum_probs=64.0
Q ss_pred CcCCcEEEEEEccC-CCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQV-GQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spd-g~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
.|.+.|+++.|+|- ...||+++.|-+|.+||.++++....+.+|++.|.. ..+|+...||+|++|+.+.++.
T Consensus 675 ~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~ 754 (1012)
T KOG1445|consen 675 IHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ 754 (1012)
T ss_pred cccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCC
Confidence 36678999999995 469999999999999999999888899999998876 8999999999999999986543
No 160
>KOG2445|consensus
Probab=98.70 E-value=1.5e-07 Score=62.58 Aligned_cols=67 Identities=12% Similarity=0.197 Sum_probs=55.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC--C--eEeeEecCCcceeec---------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT--S--KRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~--~--~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~ 68 (89)
+|.|-|.++.|.+-|..+|+++.|+++.|||.+. + .+-..+..|.+.|.. +.+|+++.|+++.||.-
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE 90 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE 90 (361)
T ss_pred CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence 4677799999999999999999999999999543 2 223345667776654 89999999999999986
No 161
>KOG0771|consensus
Probab=98.70 E-value=4.3e-08 Score=66.74 Aligned_cols=70 Identities=19% Similarity=0.139 Sum_probs=58.7
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 8 FLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
-.++|++||..+++|..||.+++|+-.+...+..+..|.+.|.+ ++|++-+.| ..+||+++++..+..+.
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence 47899999999999999999999995555566667778888887 799999999 89999999985554443
No 162
>KOG0270|consensus
Probab=98.68 E-value=9.5e-08 Score=65.73 Aligned_cols=66 Identities=14% Similarity=0.172 Sum_probs=59.0
Q ss_pred CCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCC
Q psy12376 4 RYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 4 ~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~ 69 (89)
...|..++|.|... .++++++||.|+-+|+|. ++.+..++.|.++|.+ ++++++|.|+.|.+|++.
T Consensus 329 ~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~ 404 (463)
T KOG0270|consen 329 DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFD 404 (463)
T ss_pred ccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeec
Confidence 35688999999765 778899999999999986 6889999999999887 799999999999999996
No 163
>KOG3881|consensus
Probab=98.64 E-value=9.7e-08 Score=64.89 Aligned_cols=71 Identities=20% Similarity=0.170 Sum_probs=60.8
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE-ecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV-LGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~-~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
.+++++...|+|+++.+|...|.+..||.++++.... +.+-.+.|+. +++|+||.|..|+|+|+++.+.++
T Consensus 248 ~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~ 326 (412)
T KOG3881|consen 248 NPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLH 326 (412)
T ss_pred CcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhh
Confidence 4689999999999999999999999999999987765 6666665544 699999999999999998855544
No 164
>KOG1539|consensus
Probab=98.64 E-value=4.2e-07 Score=66.56 Aligned_cols=83 Identities=20% Similarity=0.282 Sum_probs=69.2
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+.+.|+++.-+|-=..+|+|..+|+|.+++++.++.+..++-..++|.. ..+|+|...|.+.+||++..+..
T Consensus 201 ~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~ 280 (910)
T KOG1539|consen 201 FFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLI 280 (910)
T ss_pred cccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeee
Confidence 3567999999998889999999999999999999998888643466665 78999999999999999887777
Q ss_pred eeeC-CCCCCCc
Q psy12376 75 PVLG-KHTKSKP 85 (89)
Q Consensus 75 ~~l~-~h~~~~~ 85 (89)
..+. .|...+.
T Consensus 281 ~v~~nah~~sv~ 292 (910)
T KOG1539|consen 281 NVTRNAHYGSVT 292 (910)
T ss_pred eeeeccccCCcc
Confidence 6654 7855543
No 165
>KOG0642|consensus
Probab=98.62 E-value=1.7e-07 Score=66.05 Aligned_cols=72 Identities=14% Similarity=0.124 Sum_probs=58.5
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCC------CCe----EeeEecCCcceeec-------cEEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHM------TSK----RVPVLGKHTNTIVG-------QVLAIGTARGNLT 64 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~------~~~----~~~~~~~h~~~i~~-------~~las~s~d~~v~ 64 (89)
.|..+|.|+..++.++++.+|+-||+|+.|++. ... ....+.||.+.++. ..|+++|.||+|+
T Consensus 342 aH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr 421 (577)
T KOG0642|consen 342 AHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVR 421 (577)
T ss_pred cccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEE
Confidence 478899999999999999999999999999543 221 23467889887754 7899999999999
Q ss_pred EEeCCCCEE
Q psy12376 65 VYNHMTSKR 73 (89)
Q Consensus 65 iwd~~~~~~ 73 (89)
+|+......
T Consensus 422 ~w~~~~~~~ 430 (577)
T KOG0642|consen 422 LWEPTEESP 430 (577)
T ss_pred eeccCCcCc
Confidence 999965443
No 166
>KOG0772|consensus
Probab=98.62 E-value=2.8e-07 Score=64.79 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=54.3
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe------------cCCcceeec--------cEEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL------------GKHTNTIVG--------QVLAIGTARGNLT 64 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~------------~~h~~~i~~--------~~las~s~d~~v~ 64 (89)
..|.+++||+.|.+|++.+.....+|+|....+.+... .+|...+.| +.|.+++.|++++
T Consensus 215 h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlR 294 (641)
T KOG0772|consen 215 HQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLR 294 (641)
T ss_pred cccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEE
Confidence 45899999999999999999999999997765543332 357677777 7899999999999
Q ss_pred EEeCCC
Q psy12376 65 VYNHMT 70 (89)
Q Consensus 65 iwd~~~ 70 (89)
|||+..
T Consensus 295 iWdv~~ 300 (641)
T KOG0772|consen 295 IWDVNN 300 (641)
T ss_pred EEecCC
Confidence 999964
No 167
>KOG0307|consensus
Probab=98.61 E-value=4.7e-08 Score=72.89 Aligned_cols=81 Identities=16% Similarity=0.226 Sum_probs=60.8
Q ss_pred CcCCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEec--CCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLG--KHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~--~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
.|.+.|..+.|++.+. .||+|+++|+|.|||+..-+.-..+. ...+.|.| ..||+++.+|.+.|||++.
T Consensus 114 ~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~ 193 (1049)
T KOG0307|consen 114 KHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRK 193 (1049)
T ss_pred ccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccC
Confidence 4778899999999765 99999999999999997643322221 12344555 6899999999999999987
Q ss_pred CEEEeeeCCCCC
Q psy12376 71 SKRVPVLGKHTK 82 (89)
Q Consensus 71 ~~~~~~l~~h~~ 82 (89)
++.+-.+.-|.+
T Consensus 194 ~~pii~ls~~~~ 205 (1049)
T KOG0307|consen 194 KKPIIKLSDTPG 205 (1049)
T ss_pred CCcccccccCCC
Confidence 765555555544
No 168
>KOG2106|consensus
Probab=98.59 E-value=6.5e-07 Score=62.89 Aligned_cols=77 Identities=21% Similarity=0.289 Sum_probs=62.3
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCC-CCEEEe
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHM-TSKRVP 75 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~-~~~~~~ 75 (89)
.++..|+.|+|.| .+|+|+..|...+.|..+...+..-.. +.++.+ .+||.|+.|+.|+||.+. ++....
T Consensus 407 ~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~ 484 (626)
T KOG2106|consen 407 EDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYS 484 (626)
T ss_pred cCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEE
Confidence 4678899999999 999999999999999887544443333 566665 899999999999999995 677778
Q ss_pred eeCCCCC
Q psy12376 76 VLGKHTK 82 (89)
Q Consensus 76 ~l~~h~~ 82 (89)
..++|..
T Consensus 485 r~~k~~g 491 (626)
T KOG2106|consen 485 RVGKCSG 491 (626)
T ss_pred EeeeecC
Confidence 8888877
No 169
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.58 E-value=1.5e-07 Score=44.11 Aligned_cols=32 Identities=28% Similarity=0.517 Sum_probs=28.7
Q ss_pred CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEe
Q psy12376 36 SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 36 ~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd 67 (89)
|+.+..+.+|...|.+ ++|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 4677889999999987 8999999999999997
No 170
>KOG0974|consensus
Probab=98.58 E-value=3.2e-07 Score=68.11 Aligned_cols=80 Identities=13% Similarity=0.088 Sum_probs=65.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEee-EecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVP-VLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~-~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+|.+.|..+.|+-||.++++.++|-++++|++.+++... ..-+|..++.. +++++++.|-+.++|+... ....
T Consensus 173 GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n~i~t~gedctcrvW~~~~-~~l~ 251 (967)
T KOG0974|consen 173 GHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPNRIITVGEDCTCRVWGVNG-TQLE 251 (967)
T ss_pred ccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccceeEEeccceEEEEEeccc-ceeh
Confidence 678889999999999999999999999999999988766 44478887765 8999999999999997754 3334
Q ss_pred eeCCCCC
Q psy12376 76 VLGKHTK 82 (89)
Q Consensus 76 ~l~~h~~ 82 (89)
....|..
T Consensus 252 ~y~~h~g 258 (967)
T KOG0974|consen 252 VYDEHSG 258 (967)
T ss_pred hhhhhhh
Confidence 5555543
No 171
>KOG0307|consensus
Probab=98.56 E-value=7.4e-08 Score=71.86 Aligned_cols=66 Identities=23% Similarity=0.397 Sum_probs=55.2
Q ss_pred CcEEEEEEccCCCE----EEEEeCCCcEEEEeCCC---Ce---EeeEecCCcceeec--------cEEEEEeCCCCEEEE
Q psy12376 5 YYIFLLQTSQVGQV----LAIGTARGNLTVYNHMT---SK---RVPVLGKHTNTIVG--------QVLAIGTARGNLTVY 66 (89)
Q Consensus 5 ~~i~~~~~spdg~~----la~g~~~g~v~iwd~~~---~~---~~~~~~~h~~~i~~--------~~las~s~d~~v~iw 66 (89)
.....|+|++.|.. ||.|.+||.|.+||... +. .+..+..|++.|+. +.||+|+.||.|.||
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iW 144 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIW 144 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEe
Confidence 35789999998876 89999999999999765 22 24556779888876 799999999999999
Q ss_pred eCCC
Q psy12376 67 NHMT 70 (89)
Q Consensus 67 d~~~ 70 (89)
|+..
T Consensus 145 Dlnn 148 (1049)
T KOG0307|consen 145 DLNK 148 (1049)
T ss_pred ccCC
Confidence 9964
No 172
>KOG1408|consensus
Probab=98.56 E-value=5.4e-07 Score=65.67 Aligned_cols=79 Identities=13% Similarity=0.228 Sum_probs=69.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC---Ccc-eee---c---cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK---HTN-TIV---G---QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~---h~~-~i~---~---~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
.++.++..|..+++++++.|..|+|||+.+||..+.|.+ |.+ .|. + .|+|+.-.|+++.++|.-+|+++.
T Consensus 598 TlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA 677 (1080)
T KOG1408|consen 598 TLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVA 677 (1080)
T ss_pred eEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhh
Confidence 488999999999999999999999999999999998875 422 332 2 899999999999999999999999
Q ss_pred eeCCCCCCC
Q psy12376 76 VLGKHTKSK 84 (89)
Q Consensus 76 ~l~~h~~~~ 84 (89)
.+-+|+.-+
T Consensus 678 ~m~GHsE~V 686 (1080)
T KOG1408|consen 678 QMTGHSEAV 686 (1080)
T ss_pred hhcCcchhe
Confidence 999998653
No 173
>KOG0642|consensus
Probab=98.55 E-value=9.8e-08 Score=67.20 Aligned_cols=66 Identities=17% Similarity=0.221 Sum_probs=56.9
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC--------CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT--------SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~--------~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd 67 (89)
|.+.|..++|+|....|++++.||.+.+|+... -+.+..|.+|.++|.| ..+.+|+-||+|+.|+
T Consensus 293 ~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~ 372 (577)
T KOG0642|consen 293 HDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWN 372 (577)
T ss_pred chhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeec
Confidence 456788999999999999999999999999822 1346778899999988 7999999999999995
Q ss_pred C
Q psy12376 68 H 68 (89)
Q Consensus 68 ~ 68 (89)
+
T Consensus 373 ~ 373 (577)
T KOG0642|consen 373 L 373 (577)
T ss_pred c
Confidence 4
No 174
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.54 E-value=2.1e-06 Score=55.62 Aligned_cols=81 Identities=22% Similarity=0.389 Sum_probs=62.1
Q ss_pred cCCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEee-EecCCcce-eec-----cEEEEEeCCCCEEEEeCCCCEE-
Q psy12376 3 LRYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVP-VLGKHTNT-IVG-----QVLAIGTARGNLTVYNHMTSKR- 73 (89)
Q Consensus 3 ~~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~-~~~~h~~~-i~~-----~~las~s~d~~v~iwd~~~~~~- 73 (89)
|...+.+++|+|++. .+++++.|+.+.+||...++.+. .+.+|... +.+ .++++++.|+.+++|+......
T Consensus 197 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 276 (466)
T COG2319 197 HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSL 276 (466)
T ss_pred CCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcceeEeECCCCCEEEEecCCCcEEEeeecCCCcE
Confidence 567799999999998 55555899999999988887777 67788776 322 5888999999999999985553
Q ss_pred EeeeCCCCCC
Q psy12376 74 VPVLGKHTKS 83 (89)
Q Consensus 74 ~~~l~~h~~~ 83 (89)
...+.+|...
T Consensus 277 ~~~~~~~~~~ 286 (466)
T COG2319 277 LRTLSGHSSS 286 (466)
T ss_pred EEEEecCCcc
Confidence 3333555444
No 175
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.53 E-value=1.5e-06 Score=55.83 Aligned_cols=70 Identities=10% Similarity=0.069 Sum_probs=50.4
Q ss_pred EEEEEccCCCEEEE-EeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEE-eCCCCEEEEeCCCCEEEeeeC
Q psy12376 8 FLLQTSQVGQVLAI-GTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIG-TARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 8 ~~~~~spdg~~la~-g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~-s~d~~v~iwd~~~~~~~~~l~ 78 (89)
..++|+|+|+++++ ...++.+.+||..+++....+.. ...+.+ ++|+++ +.++.|.+||+++++.+..+.
T Consensus 210 ~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~ 288 (300)
T TIGR03866 210 VGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLV-GQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIK 288 (300)
T ss_pred cceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEe-CCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 46889999998554 34567899999998887655432 222322 566665 579999999999988766653
No 176
>KOG0321|consensus
Probab=98.53 E-value=1.7e-07 Score=67.07 Aligned_cols=74 Identities=15% Similarity=0.199 Sum_probs=53.0
Q ss_pred CCcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeE-------eeEecCCcc--------------------eeec-
Q psy12376 1 MNLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKR-------VPVLGKHTN--------------------TIVG- 51 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~-------~~~~~~h~~--------------------~i~~- 51 (89)
++|...+-+++|.|+. ..|++|+.||.|.|||++-... .+....|+. .|..
T Consensus 141 ~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ss 220 (720)
T KOG0321|consen 141 LGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSS 220 (720)
T ss_pred cccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeee
Confidence 4678889999999965 5899999999999999975431 011112221 1111
Q ss_pred ---------cEEEEEeC-CCCEEEEeCCCCEEE
Q psy12376 52 ---------QVLAIGTA-RGNLTVYNHMTSKRV 74 (89)
Q Consensus 52 ---------~~las~s~-d~~v~iwd~~~~~~~ 74 (89)
..||++|. |+.|+|||++.....
T Consensus 221 vTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~ 253 (720)
T KOG0321|consen 221 VTVVLFKDESTLASAGAADSTIKVWDLRKNYTA 253 (720)
T ss_pred eEEEEEeccceeeeccCCCcceEEEeecccccc
Confidence 68899988 999999999865543
No 177
>KOG0650|consensus
Probab=98.52 E-value=7.7e-07 Score=63.54 Aligned_cols=65 Identities=18% Similarity=0.247 Sum_probs=50.1
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~ 68 (89)
+|.+.+.+++..|.|++||+|++||+|+||.+.+|++++.++- .+.|+| ..||.+-.+. +.|-|.
T Consensus 398 GHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~-d~~I~~vaw~P~~~~~vLAvA~~~~-~~ivnp 471 (733)
T KOG0650|consen 398 GHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF-DSEIRSVAWNPLSDLCVLAVAVGEC-VLIVNP 471 (733)
T ss_pred ccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee-cceeEEEEecCCCCceeEEEEecCc-eEEeCc
Confidence 6888999999999999999999999999999999999887653 234554 4555544333 555444
No 178
>KOG1409|consensus
Probab=98.52 E-value=6.9e-07 Score=60.27 Aligned_cols=72 Identities=14% Similarity=0.133 Sum_probs=61.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE-eeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR-VPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~-~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|.+++++++|.|....|.+|..|..+.+||+-.++. ...+++|...+.. ..+.+++.||.|.+||.+-...
T Consensus 195 ~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 195 GHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRV 274 (404)
T ss_pred CcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceee
Confidence 4678899999999999999999999999999865443 4567889888776 7899999999999999964433
No 179
>KOG1523|consensus
Probab=98.51 E-value=6e-07 Score=60.00 Aligned_cols=72 Identities=13% Similarity=0.173 Sum_probs=61.6
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC---eEeeEecCCcceeec-------cEEEEEeCCCCEEEEeC-CCCE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS---KRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNH-MTSK 72 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~---~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~-~~~~ 72 (89)
..+|+|.+|++|+..+|.+..+..|.||..... +..+.+..|...+++ +.|++|+.|...++|.. .+++
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~ 89 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT 89 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence 467999999999999999999999999998654 456788889888876 79999999999999999 5555
Q ss_pred EEe
Q psy12376 73 RVP 75 (89)
Q Consensus 73 ~~~ 75 (89)
-.+
T Consensus 90 Wkp 92 (361)
T KOG1523|consen 90 WKP 92 (361)
T ss_pred ecc
Confidence 444
No 180
>KOG0649|consensus
Probab=98.50 E-value=9.6e-07 Score=57.53 Aligned_cols=86 Identities=15% Similarity=0.193 Sum_probs=61.1
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCc--c--------eeec-----cEEEEEeCCCCEEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHT--N--------TIVG-----QVLAIGTARGNLTVY 66 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~--~--------~i~~-----~~las~s~d~~v~iw 66 (89)
+|+|.+-++.--.....+++|+.||++++||.++++.+..+..++ . .|-| ..+++|+ ...+.+|
T Consensus 154 GHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGg-Gp~lslw 232 (325)
T KOG0649|consen 154 GHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGG-GPKLSLW 232 (325)
T ss_pred CCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecC-CCceeEE
Confidence 578888888875545588999999999999999998877665432 2 2333 6777664 4569999
Q ss_pred eCCCCEEEe--eeCCCCCCCcCCC
Q psy12376 67 NHMTSKRVP--VLGKHTKSKPSTE 88 (89)
Q Consensus 67 d~~~~~~~~--~l~~h~~~~~~~~ 88 (89)
+++..+... .+.+|...+.|.|
T Consensus 233 hLrsse~t~vfpipa~v~~v~F~~ 256 (325)
T KOG0649|consen 233 HLRSSESTCVFPIPARVHLVDFVD 256 (325)
T ss_pred eccCCCceEEEecccceeEeeeec
Confidence 998665544 4467666665544
No 181
>KOG2695|consensus
Probab=98.49 E-value=3.1e-07 Score=62.01 Aligned_cols=76 Identities=14% Similarity=0.089 Sum_probs=61.6
Q ss_pred cCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeE---eeEecCCcce---eec------cEEEEEeCCCCEEEEeCC
Q psy12376 3 LRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKR---VPVLGKHTNT---IVG------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 3 ~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~---~~~~~~h~~~---i~~------~~las~s~d~~v~iwd~~ 69 (89)
|+..|++++--. ++++|++.+.+|+|.+||.+--++ +..+.+|... +.. ..++++++|-..+||.++
T Consensus 297 h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~ 376 (425)
T KOG2695|consen 297 HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLD 376 (425)
T ss_pred cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecc
Confidence 556678877666 788999999999999999875444 8899998652 222 789999999999999999
Q ss_pred CCEEEeeeC
Q psy12376 70 TSKRVPVLG 78 (89)
Q Consensus 70 ~~~~~~~l~ 78 (89)
+|..+.++.
T Consensus 377 ~ghLl~tip 385 (425)
T KOG2695|consen 377 SGHLLCTIP 385 (425)
T ss_pred cCceeeccC
Confidence 998887653
No 182
>KOG0290|consensus
Probab=98.49 E-value=8.1e-07 Score=58.96 Aligned_cols=73 Identities=11% Similarity=0.118 Sum_probs=60.4
Q ss_pred cCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCe---EeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 3 LRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSK---RVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 3 ~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~---~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
+..++++..|.- |-++|.+++-|-+..|||+.+|. ...++-.|.++|.. ..|||.|.||+|+++|++.
T Consensus 149 ~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~ 228 (364)
T KOG0290|consen 149 FCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRS 228 (364)
T ss_pred cCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecc
Confidence 346789999996 66799999999999999998763 35677789888876 7999999999999999986
Q ss_pred CEEEe
Q psy12376 71 SKRVP 75 (89)
Q Consensus 71 ~~~~~ 75 (89)
-+...
T Consensus 229 leHST 233 (364)
T KOG0290|consen 229 LEHST 233 (364)
T ss_pred cccce
Confidence 55433
No 183
>KOG2048|consensus
Probab=98.48 E-value=1.8e-06 Score=62.09 Aligned_cols=71 Identities=17% Similarity=0.266 Sum_probs=59.8
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEe--eEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRV--PVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~--~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
..|++++.+|.+..+++|++||.++.+++..++.. +.+...++++.+ ..+|+|+.||-|++||+..+...+
T Consensus 111 g~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~ 190 (691)
T KOG2048|consen 111 GAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLH 190 (691)
T ss_pred cceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEE
Confidence 56999999999999999999999999988877642 345556678877 569999999999999998877666
No 184
>KOG1007|consensus
Probab=98.47 E-value=5.8e-07 Score=59.64 Aligned_cols=65 Identities=14% Similarity=0.152 Sum_probs=56.0
Q ss_pred cEEEEEEccCCC-EEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 6 YIFLLQTSQVGQ-VLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 6 ~i~~~~~spdg~-~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
.+..+.|.|+-+ +||++++||.|++||.+. ...+..+.+|...+.+ .++.++|.|..|.+|....
T Consensus 216 ~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~s 290 (370)
T KOG1007|consen 216 RVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASS 290 (370)
T ss_pred eeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccc
Confidence 378899999876 789999999999999975 5567888999887776 8999999999999999854
No 185
>KOG1334|consensus
Probab=98.47 E-value=7.9e-08 Score=66.97 Aligned_cols=68 Identities=12% Similarity=0.233 Sum_probs=57.0
Q ss_pred EEEE-EEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 7 IFLL-QTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 7 i~~~-~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
|-++ -|.|..+|+++|++.|.|.||+..+++.++.+.+-...|+| ..||+.+.|..|+||...+.++.
T Consensus 396 VKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er~ 471 (559)
T KOG1334|consen 396 VKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAERA 471 (559)
T ss_pred cceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCccccc
Confidence 4444 36688899999999999999999999988888775568888 79999999999999999655443
No 186
>KOG0771|consensus
Probab=98.43 E-value=2.9e-06 Score=58.05 Aligned_cols=34 Identities=24% Similarity=0.071 Sum_probs=31.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS 36 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~ 36 (89)
.|..+|-++.|||||++||+-+.| ...||+.++|
T Consensus 184 ~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g 217 (398)
T KOG0771|consen 184 AHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTG 217 (398)
T ss_pred hhcCccccceeCCCCcEEEEecCC-ceEEEEeccC
Confidence 466789999999999999999999 9999999988
No 187
>KOG2096|consensus
Probab=98.42 E-value=7e-07 Score=59.95 Aligned_cols=64 Identities=14% Similarity=0.214 Sum_probs=52.9
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeC---CCCe-----EeeEecCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNH---MTSK-----RVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~---~~~~-----~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
.-+..+.||+|+|+|+++-...|.+|.+ +.|. .+..+.+|+..|.. ..+++.|.||+.+|||.+
T Consensus 230 ~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 230 SNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred cccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 3466899999999999999999999996 2332 24467899998876 799999999999999984
No 188
>KOG1009|consensus
Probab=98.42 E-value=3.7e-07 Score=62.40 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=62.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|.+.++.++|+||+.++++++.|..+++||...|.....+..|..-+.- +++++=+.|...+++.+...++.
T Consensus 121 ~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~ 200 (434)
T KOG1009|consen 121 GHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVI 200 (434)
T ss_pred ccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeee
Confidence 47788999999999999999999999999999999998888888764432 89999999998888887654444
Q ss_pred e
Q psy12376 75 P 75 (89)
Q Consensus 75 ~ 75 (89)
+
T Consensus 201 ~ 201 (434)
T KOG1009|consen 201 K 201 (434)
T ss_pred e
Confidence 3
No 189
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.37 E-value=6.1e-06 Score=58.61 Aligned_cols=69 Identities=19% Similarity=0.337 Sum_probs=51.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc---eeec----cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN---TIVG----QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~---~i~~----~~las~s~d~~v~iwd~~~~~ 72 (89)
.++..+.+++++|+.+.|+.|+.||+|.+||...+-. .+....- -+.. .+++.|+..|.+.+||+.-+.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t--~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVT--LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP 332 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCee--eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence 4667899999999999999999999999999876532 1111110 0111 689999999999999996443
No 190
>KOG2110|consensus
Probab=98.36 E-value=6.5e-06 Score=55.88 Aligned_cols=75 Identities=15% Similarity=0.328 Sum_probs=62.3
Q ss_pred cEEEEEEccCCCEEEEE--eCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCC-EEEEeCCCCEEEe
Q psy12376 6 YIFLLQTSQVGQVLAIG--TARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGN-LTVYNHMTSKRVP 75 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g--~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~-v~iwd~~~~~~~~ 75 (89)
.+.++++++.+.+||.- ...|.|.+||..+-+.+..+..|++.+-| .+||+||+.|+ |+|+.+.+|++..
T Consensus 131 gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~ 210 (391)
T KOG2110|consen 131 GLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLY 210 (391)
T ss_pred ceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEee
Confidence 36666666777799854 45889999999998889999999999888 89999999997 5899999998888
Q ss_pred eeCCC
Q psy12376 76 VLGKH 80 (89)
Q Consensus 76 ~l~~h 80 (89)
.+.+-
T Consensus 211 eFRRG 215 (391)
T KOG2110|consen 211 EFRRG 215 (391)
T ss_pred eeeCC
Confidence 77543
No 191
>KOG1063|consensus
Probab=98.36 E-value=1.9e-06 Score=62.19 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=60.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCC-----cEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARG-----NLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g-----~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
+|..+|++++-+|+|+++|+++... .|.+|+..+...+..+.+|.-.|+- ++|++.|+|+++.+|+..
T Consensus 523 GHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~ 602 (764)
T KOG1063|consen 523 GHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQ 602 (764)
T ss_pred cCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeee
Confidence 5777899999999999999998754 6899999998888889999887765 899999999999999985
Q ss_pred C
Q psy12376 70 T 70 (89)
Q Consensus 70 ~ 70 (89)
.
T Consensus 603 ~ 603 (764)
T KOG1063|consen 603 E 603 (764)
T ss_pred c
Confidence 3
No 192
>KOG0322|consensus
Probab=98.35 E-value=2.1e-06 Score=56.33 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=32.8
Q ss_pred cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCCCCcCC
Q psy12376 52 QVLAIGTARGNLTVYNHMTSKRVPVLGKHTKSKPST 87 (89)
Q Consensus 52 ~~las~s~d~~v~iwd~~~~~~~~~l~~h~~~~~~~ 87 (89)
+.+|+++.|+-++||+-++...+..|.-|+..+++.
T Consensus 264 KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~v 299 (323)
T KOG0322|consen 264 KILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAV 299 (323)
T ss_pred cEEeecccCCcEEEEEeccCCchhhhhhhhcceeEE
Confidence 899999999999999999999999999999887753
No 193
>KOG4328|consensus
Probab=98.34 E-value=3.5e-06 Score=58.50 Aligned_cols=70 Identities=16% Similarity=0.248 Sum_probs=56.6
Q ss_pred CCcEEEEEEccCC--CEEEEEeCCCcEEEEeCCCC----eEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCC
Q psy12376 4 RYYIFLLQTSQVG--QVLAIGTARGNLTVYNHMTS----KRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 4 ~~~i~~~~~spdg--~~la~g~~~g~v~iwd~~~~----~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~ 69 (89)
...|++++|+|.- +.+|+|+.-|.|-+||..+. ..+..+.+|..+|.+ .++.+.|.||++++=|++
T Consensus 186 ~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~ 265 (498)
T KOG4328|consen 186 DRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFE 265 (498)
T ss_pred ccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeec
Confidence 4579999999964 58999999999999999532 235567789887776 788999999999999997
Q ss_pred CCEE
Q psy12376 70 TSKR 73 (89)
Q Consensus 70 ~~~~ 73 (89)
.+..
T Consensus 266 ~~i~ 269 (498)
T KOG4328|consen 266 GNIS 269 (498)
T ss_pred chhh
Confidence 6543
No 194
>KOG1538|consensus
Probab=98.33 E-value=4.4e-06 Score=60.77 Aligned_cols=33 Identities=12% Similarity=0.290 Sum_probs=31.1
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHM 34 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~ 34 (89)
+|+|.|++++||.||+.+|+|+.|..|.+|+..
T Consensus 51 gHKDtVycVAys~dGkrFASG~aDK~VI~W~~k 83 (1081)
T KOG1538|consen 51 GHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK 83 (1081)
T ss_pred cccceEEEEEEccCCceeccCCCceeEEEeccc
Confidence 588999999999999999999999999999865
No 195
>KOG2919|consensus
Probab=98.33 E-value=3.2e-06 Score=56.88 Aligned_cols=76 Identities=24% Similarity=0.364 Sum_probs=60.8
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeC-CCCeEeeEec-------CCcceeec--------cEEEEEeCCCCEEEEeCCCC
Q psy12376 8 FLLQTSQVGQVLAIGTARGNLTVYNH-MTSKRVPVLG-------KHTNTIVG--------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v~iwd~-~~~~~~~~~~-------~h~~~i~~--------~~las~s~d~~v~iwd~~~~ 71 (89)
-+++|+|||++|.+|. ...|++||+ +.|+....+. +..+.|.| +.+|.|+.-..+-||+-...
T Consensus 162 hsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~ 240 (406)
T KOG2919|consen 162 HSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGR 240 (406)
T ss_pred eeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCC
Confidence 4899999999999986 459999998 7787644332 23445555 68999999999999998888
Q ss_pred EEEeeeCCCCCCC
Q psy12376 72 KRVPVLGKHTKSK 84 (89)
Q Consensus 72 ~~~~~l~~h~~~~ 84 (89)
....++++|.+.|
T Consensus 241 ~pl~llggh~gGv 253 (406)
T KOG2919|consen 241 RPLQLLGGHGGGV 253 (406)
T ss_pred CceeeecccCCCe
Confidence 8888999998765
No 196
>KOG2106|consensus
Probab=98.32 E-value=2.8e-06 Score=59.79 Aligned_cols=62 Identities=15% Similarity=0.344 Sum_probs=54.0
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~ 68 (89)
-|.|++|.++|.. ++|..+|.|.||+..+.+..++...|.+.|.+ ..|.||+.|+.|..||-
T Consensus 248 ~Vl~v~F~engdv-iTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~ 315 (626)
T KOG2106|consen 248 FVLCVTFLENGDV-ITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDD 315 (626)
T ss_pred EEEEEEEcCCCCE-EeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEeccc
Confidence 4899999999864 78999999999999888777766699998877 67888999999999994
No 197
>KOG1587|consensus
Probab=98.32 E-value=3.9e-06 Score=60.10 Aligned_cols=67 Identities=10% Similarity=0.110 Sum_probs=51.5
Q ss_pred CCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeE--eeE----ecCCcceeec---------cEEEEEeCCCCEEEEe
Q psy12376 4 RYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKR--VPV----LGKHTNTIVG---------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 4 ~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~--~~~----~~~h~~~i~~---------~~las~s~d~~v~iwd 67 (89)
+.+|+++.|+| +...+|.|+.+|.|.+||.+.+.. ... ...|..++.. .-|+++|.||.|..|+
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~ 321 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWD 321 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeee
Confidence 45799999999 567889999999999999987654 222 2346665554 3488888999999998
Q ss_pred CCC
Q psy12376 68 HMT 70 (89)
Q Consensus 68 ~~~ 70 (89)
++.
T Consensus 322 ~~~ 324 (555)
T KOG1587|consen 322 TDM 324 (555)
T ss_pred ccc
Confidence 863
No 198
>KOG4328|consensus
Probab=98.31 E-value=1.1e-06 Score=60.91 Aligned_cols=81 Identities=20% Similarity=0.186 Sum_probs=61.2
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE-eeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC--CEEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR-VPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT--SKRV 74 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~-~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~--~~~~ 74 (89)
.++.+.|+.+...++.+..=|.+.+||.++++. ...+.-|+..|.. .+||+||.|++++|||++. ++..
T Consensus 281 ~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s 360 (498)
T KOG4328|consen 281 WFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS 360 (498)
T ss_pred eeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCC
Confidence 478899999888888888888999999987544 5555567666654 7999999999999999974 3332
Q ss_pred --eeeCCCCCCCcC
Q psy12376 75 --PVLGKHTKSKPS 86 (89)
Q Consensus 75 --~~l~~h~~~~~~ 86 (89)
-....|...|++
T Consensus 361 p~lst~~HrrsV~s 374 (498)
T KOG4328|consen 361 PFLSTLPHRRSVNS 374 (498)
T ss_pred cceecccccceeee
Confidence 223567777665
No 199
>KOG4547|consensus
Probab=98.30 E-value=7.7e-06 Score=57.92 Aligned_cols=83 Identities=8% Similarity=-0.007 Sum_probs=70.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...+.++.|+.+--+|.+++.|+.+..|+...++.++.++..+..+.. +++++||. .|.+||+++++.+
T Consensus 100 ~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as~--~ik~~~~~~kevv 177 (541)
T KOG4547|consen 100 KHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTASR--QIKVLDIETKEVV 177 (541)
T ss_pred CCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEeccc--eEEEEEccCceEE
Confidence 46778999999999889999999999999999998888887765443322 68888875 4999999999999
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
..+.+|...+++
T Consensus 178 ~~ftgh~s~v~t 189 (541)
T KOG4547|consen 178 ITFTGHGSPVRT 189 (541)
T ss_pred EEecCCCcceEE
Confidence 999999988765
No 200
>KOG1188|consensus
Probab=98.29 E-value=1.5e-06 Score=58.52 Aligned_cols=59 Identities=12% Similarity=0.248 Sum_probs=48.1
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 17 QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
..+|++..+|.|++||..+++.+..+.++...+.. ..+.+|+.||+|++||++......
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a 108 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESA 108 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhh
Confidence 35899999999999999999888888876553322 678999999999999998765444
No 201
>KOG4227|consensus
Probab=98.27 E-value=3.4e-06 Score=58.19 Aligned_cols=76 Identities=24% Similarity=0.190 Sum_probs=60.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC------eEeeEec-CCcceeec-------cEEEEEeCCCCEEEEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS------KRVPVLG-KHTNTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~------~~~~~~~-~h~~~i~~-------~~las~s~d~~v~iwd 67 (89)
+|.+.|.+++||.++++||+|++|-.+++|++... |.+.... .|.+.|.| .++.+|+.+++|..-|
T Consensus 54 ~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HD 133 (609)
T KOG4227|consen 54 EHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHD 133 (609)
T ss_pred hhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeee
Confidence 56778999999999999999999999999998642 2233333 35467777 7899999999999999
Q ss_pred CCCCEEEeee
Q psy12376 68 HMTSKRVPVL 77 (89)
Q Consensus 68 ~~~~~~~~~l 77 (89)
+++.+.+-..
T Consensus 134 iEt~qsi~V~ 143 (609)
T KOG4227|consen 134 IETKQSIYVA 143 (609)
T ss_pred cccceeeeee
Confidence 9987776544
No 202
>KOG1524|consensus
Probab=98.26 E-value=1.7e-06 Score=61.40 Aligned_cols=79 Identities=10% Similarity=0.100 Sum_probs=57.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE-----------------------------------------eeE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR-----------------------------------------VPV 41 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~-----------------------------------------~~~ 41 (89)
|...+.+-.|+|||.-|++.+.||.|++|.. +|-. +-.
T Consensus 103 H~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~ 181 (737)
T KOG1524|consen 103 HAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIR 181 (737)
T ss_pred hhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeecccccceeE
Confidence 4456788899999999999999999999974 3311 112
Q ss_pred ecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCCC
Q psy12376 42 LGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLGKHTKS 83 (89)
Q Consensus 42 ~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~~h~~~ 83 (89)
+..|.+.|.| +++++|++|-...|||-. |..+.....|.-.
T Consensus 182 WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ 229 (737)
T KOG1524|consen 182 WRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYA 229 (737)
T ss_pred EeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccc
Confidence 4456666665 899999999999999975 4444444445433
No 203
>KOG0974|consensus
Probab=98.26 E-value=2.9e-06 Score=63.24 Aligned_cols=76 Identities=13% Similarity=0.159 Sum_probs=60.1
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe-eeCCC
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP-VLGKH 80 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~-~l~~h 80 (89)
-+.++++--++++|+.-+.|.+|+...-+.-..+.+|.+.|.. .++++.|+|.++++|++++.+... ..-+|
T Consensus 138 ~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgH 217 (967)
T KOG0974|consen 138 IIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGH 217 (967)
T ss_pred EEeccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccc
Confidence 3456777779999999999999998632222247789887665 899999999999999999887665 66688
Q ss_pred CCCC
Q psy12376 81 TKSK 84 (89)
Q Consensus 81 ~~~~ 84 (89)
+.++
T Consensus 218 saRv 221 (967)
T KOG0974|consen 218 SARV 221 (967)
T ss_pred ccee
Confidence 8764
No 204
>KOG4378|consensus
Probab=98.23 E-value=9.8e-06 Score=57.19 Aligned_cols=82 Identities=10% Similarity=0.200 Sum_probs=63.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc-eee--c------cEEEEEeCCCCEEEEeCCCC-
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN-TIV--G------QVLAIGTARGNLTVYNHMTS- 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~-~i~--~------~~las~s~d~~v~iwd~~~~- 71 (89)
+|++.|+++.+.-..++||+++..|.|.|....++..-..+.-..+ .++ . -+|.+++++|.|.+||+...
T Consensus 119 dh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~s 198 (673)
T KOG4378|consen 119 DHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMS 198 (673)
T ss_pred CCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCC
Confidence 5778899999999999999999999999999988776555542222 121 1 68999999999999999643
Q ss_pred EEEeeeCCCCCC
Q psy12376 72 KRVPVLGKHTKS 83 (89)
Q Consensus 72 ~~~~~l~~h~~~ 83 (89)
...+....|+.+
T Consensus 199 p~~~~~~~HsAP 210 (673)
T KOG4378|consen 199 PIFHASEAHSAP 210 (673)
T ss_pred cccchhhhccCC
Confidence 344556777765
No 205
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.22 E-value=4.2e-06 Score=37.01 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=27.0
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYN 32 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd 32 (89)
+...+.++.|+|++.++++++.|+.+++|+
T Consensus 11 ~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 11 HTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 456799999999999999999999999996
No 206
>KOG4378|consensus
Probab=98.20 E-value=6.3e-06 Score=58.14 Aligned_cols=81 Identities=16% Similarity=0.163 Sum_probs=61.9
Q ss_pred cCCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEecCCcceee------c-cEEEEEeCCCCEEEEeCCC-CEE
Q psy12376 3 LRYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIV------G-QVLAIGTARGNLTVYNHMT-SKR 73 (89)
Q Consensus 3 ~~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~------~-~~las~s~d~~v~iwd~~~-~~~ 73 (89)
|..+...++|||..+ .|++-+.|..|.+||++..+...++.. ..++. | .+|+.|...|.|..||++. ...
T Consensus 207 HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y-~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~P 285 (673)
T KOG4378|consen 207 HSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTY-SHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAP 285 (673)
T ss_pred ccCCcCcceecCCccceEEEecccceEEEeecccccccceeee-cCCcceeeecCCceEEEeecCCceEEEEecccCCCC
Confidence 567788999999765 778889999999999987665444431 12222 2 7999999999999999984 556
Q ss_pred EeeeCCCCCCC
Q psy12376 74 VPVLGKHTKSK 84 (89)
Q Consensus 74 ~~~l~~h~~~~ 84 (89)
+..+-.|...|
T Consensus 286 v~v~sah~~sV 296 (673)
T KOG4378|consen 286 VAVRSAHDASV 296 (673)
T ss_pred ceEeeecccce
Confidence 67777888764
No 207
>KOG1272|consensus
Probab=98.20 E-value=1.5e-06 Score=60.60 Aligned_cols=71 Identities=7% Similarity=0.190 Sum_probs=60.4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
.+..+...|-...+-+|..+|+|.+|.....+.+.++.-|.++|.+ .|+||++.|..+.|||++.-...+.
T Consensus 253 ~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t 330 (545)
T KOG1272|consen 253 RTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHT 330 (545)
T ss_pred ccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccce
Confidence 3566788887788999999999999999988887777789888877 8999999999999999986554443
No 208
>KOG0280|consensus
Probab=98.18 E-value=9.2e-06 Score=53.99 Aligned_cols=67 Identities=15% Similarity=0.192 Sum_probs=52.0
Q ss_pred cCCcEEEEEEccC-CCEEEEEeCCCcEEEEeCC-CCeEeeE-ecCCcceeec--------cEEEEEeCCCCEEEEeCC
Q psy12376 3 LRYYIFLLQTSQV-GQVLAIGTARGNLTVYNHM-TSKRVPV-LGKHTNTIVG--------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 3 ~~~~i~~~~~spd-g~~la~g~~~g~v~iwd~~-~~~~~~~-~~~h~~~i~~--------~~las~s~d~~v~iwd~~ 69 (89)
|..+++-+.|+-. -+.+.+|++||.+.-||+| .++.+.. .+-|...|.+ .++++|+.|..|++||.+
T Consensus 164 He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtR 241 (339)
T KOG0280|consen 164 HEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTR 241 (339)
T ss_pred cceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehh
Confidence 4556777788753 4688999999999999999 4444433 3456666655 599999999999999997
No 209
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=98.16 E-value=1.3e-05 Score=39.58 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=30.0
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR 38 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~ 38 (89)
+..|.+++|+|....||.++.+|.|.++.. +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 457999999999999999999999999988 5543
No 210
>KOG1963|consensus
Probab=98.11 E-value=1.3e-05 Score=58.87 Aligned_cols=76 Identities=21% Similarity=0.319 Sum_probs=59.1
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC--Ce--EeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT--SK--RVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~--~~--~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
|...+++.++||.+.++|+|..||.|.+|.--. +. ..+.+.=|...|.+ .+|.||+..+-+.+|.++++
T Consensus 204 Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~ 283 (792)
T KOG1963|consen 204 HTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETG 283 (792)
T ss_pred hcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCC
Confidence 455589999999999999999999999998543 21 23444446666666 89999999999999999988
Q ss_pred EEEeeeCC
Q psy12376 72 KRVPVLGK 79 (89)
Q Consensus 72 ~~~~~l~~ 79 (89)
++ +.|++
T Consensus 284 ~k-qfLPR 290 (792)
T KOG1963|consen 284 KK-QFLPR 290 (792)
T ss_pred Cc-ccccc
Confidence 73 44443
No 211
>KOG1272|consensus
Probab=98.11 E-value=8.8e-06 Score=56.83 Aligned_cols=68 Identities=7% Similarity=0.090 Sum_probs=50.3
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC-Ccc-eeec--cEEEEEeCCCCEEEEeC
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK-HTN-TIVG--QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~-h~~-~i~~--~~las~s~d~~v~iwd~ 68 (89)
++|+.+|.++++.++|.++|+.+.|..+.|||++..+.+..+.. |.. .+.- +-+.++|....|.||--
T Consensus 290 LcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~SqkglLA~~~G~~v~iw~d 361 (545)
T KOG1272|consen 290 LCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKGLLALSYGDHVQIWKD 361 (545)
T ss_pred HhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCccccccccccceeeecCCeeeeehh
Confidence 36899999999999999999999999999999998765554432 322 1211 33444456667999975
No 212
>KOG1310|consensus
Probab=98.11 E-value=1.1e-05 Score=57.62 Aligned_cols=58 Identities=16% Similarity=0.335 Sum_probs=51.0
Q ss_pred ccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 13 SQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 13 spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
...|+++++|++||...+|+..+++....+.+-...+.| ..+|+.+.|.+|+||+...
T Consensus 633 GqrgeyiasgSddgr~fiwek~tg~i~av~~gdssivnciqghP~~~~latSgiDstiKIwsp~a 697 (758)
T KOG1310|consen 633 GQRGEYIASGSDDGRFFIWEKLTGSILAVIHGDSSIVNCIQGHPRCPTLATSGIDSTIKIWSPEA 697 (758)
T ss_pred ccCCCeeeEecCCCceEEeecCCcceEEEeeCchhheeeccCCCCCceeeeccCccceEEecccC
Confidence 457899999999999999999999988888877777777 6899999999999999753
No 213
>KOG0644|consensus
Probab=98.09 E-value=7.8e-07 Score=65.58 Aligned_cols=68 Identities=18% Similarity=0.176 Sum_probs=61.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec---cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG---QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~---~~las~s~d~~v~iwd~~ 69 (89)
+|...|+.++.+....++|+++.|..|++|-..++..+..+.+|++.|++ .=+++.+.||++++||-+
T Consensus 230 Ghs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 230 GHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRASSSDDGTCRIWDAR 300 (1113)
T ss_pred CCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccccCCCCCceEecccc
Confidence 56777999999999999999999999999999999999999999999988 445578999999999987
No 214
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.06 E-value=0.00011 Score=51.04 Aligned_cols=71 Identities=13% Similarity=0.144 Sum_probs=47.8
Q ss_pred CCcEEEEEEccCCCEEEEEeC---CCcEEEEeCCCCeEeeEecCCcceeec-------c-EEEEEeCCCC--EEEEeCCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTA---RGNLTVYNHMTSKRVPVLGKHTNTIVG-------Q-VLAIGTARGN--LTVYNHMT 70 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~---~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~-~las~s~d~~--v~iwd~~~ 70 (89)
...+.+.+|||||+.|+..+. +..|.+||..+++. ..+..+.+.+.+ + ++++.+.++. |++||+++
T Consensus 201 ~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~ 279 (435)
T PRK05137 201 SSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR-ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRS 279 (435)
T ss_pred CCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE-EEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCC
Confidence 456889999999999988764 46899999988764 233333332222 3 4456666665 77779887
Q ss_pred CEEEe
Q psy12376 71 SKRVP 75 (89)
Q Consensus 71 ~~~~~ 75 (89)
+....
T Consensus 280 ~~~~~ 284 (435)
T PRK05137 280 GTTTR 284 (435)
T ss_pred CceEE
Confidence 66544
No 215
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.06 E-value=5.5e-05 Score=52.45 Aligned_cols=71 Identities=20% Similarity=0.155 Sum_probs=47.1
Q ss_pred CCcEEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeE--eeEecCCcceeec----cEEEEE-eCCCCEEEE--eCCCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTAR---GNLTVYNHMTSKR--VPVLGKHTNTIVG----QVLAIG-TARGNLTVY--NHMTS 71 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~---g~v~iwd~~~~~~--~~~~~~h~~~i~~----~~las~-s~d~~v~iw--d~~~~ 71 (89)
...+...+|||||+.||..+.+ ..|.+||..+++. +..+.+|...+.- ++|+.+ +.++.+.|| |+.++
T Consensus 203 ~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~ 282 (429)
T PRK01742 203 SQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGG 282 (429)
T ss_pred CCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCC
Confidence 4568899999999999887653 3699999988753 3444455443322 566655 568876555 66555
Q ss_pred EEE
Q psy12376 72 KRV 74 (89)
Q Consensus 72 ~~~ 74 (89)
...
T Consensus 283 ~~~ 285 (429)
T PRK01742 283 TPS 285 (429)
T ss_pred CeE
Confidence 543
No 216
>KOG1064|consensus
Probab=98.06 E-value=3.2e-06 Score=66.42 Aligned_cols=73 Identities=11% Similarity=0.137 Sum_probs=59.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeeccEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVGQVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.|....+++++-|.-+.|.+|+.+|.|++||++..+..+.++.- ..-.+|++|+..|.+.||++..-..++.+
T Consensus 2334 ~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~~---~~~~~f~~~ss~g~ikIw~~s~~~ll~~~ 2406 (2439)
T KOG1064|consen 2334 CHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQAL---DTREYFVTGSSEGNIKIWRLSEFGLLHTF 2406 (2439)
T ss_pred ecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhhh---hhhheeeccCcccceEEEEccccchhhcC
Confidence 46778999999999999999999999999999987766666541 11179999999999999999876655544
No 217
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.03 E-value=8.8e-05 Score=50.85 Aligned_cols=70 Identities=20% Similarity=0.182 Sum_probs=50.8
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceee----c--cEEE-EEeCCCCEEEEeCCCCEEEeee
Q psy12376 8 FLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIV----G--QVLA-IGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~----~--~~la-s~s~d~~v~iwd~~~~~~~~~l 77 (89)
..+.|+|||+++.+.+.||.|.++|+.+++.+..+.....+.. . ++++ +...++.+.|+|.++.+.++.+
T Consensus 40 ~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I 116 (369)
T PF02239_consen 40 AGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTI 116 (369)
T ss_dssp EEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEE
T ss_pred eEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeec
Confidence 4578999999999999999999999999998887764333221 1 5554 5568999999999988877755
No 218
>KOG4714|consensus
Probab=98.02 E-value=4.6e-06 Score=54.71 Aligned_cols=66 Identities=17% Similarity=0.196 Sum_probs=52.1
Q ss_pred CcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEe-eEecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 5 YYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKRV-PVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 5 ~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~~-~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
+.+++++-+|.. +.+++|+.+|.+-+||+++.... -.+..|+.+|.. ..|+++++||++.-||-.+
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 348888999955 57789999999999999986432 245567776654 7899999999999999864
No 219
>KOG2055|consensus
Probab=98.00 E-value=4.5e-05 Score=53.24 Aligned_cols=76 Identities=20% Similarity=0.117 Sum_probs=57.8
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC---Ccceeec--------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK---HTNTIVG--------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~---h~~~i~~--------~~las~s~d~~v~iwd~~~~~~ 73 (89)
..|+++.|+|..+.|++++-||.++||.+. |+....++. ...+|.+ ..+++++....++.||+.+++.
T Consensus 214 ~~I~sv~FHp~~plllvaG~d~~lrifqvD-Gk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 214 GGITSVQFHPTAPLLLVAGLDGTLRIFQVD-GKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred CCceEEEecCCCceEEEecCCCcEEEEEec-CccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 469999999999999999999999999985 344333332 2345544 4899999999999999998776
Q ss_pred Ee--eeCCCC
Q psy12376 74 VP--VLGKHT 81 (89)
Q Consensus 74 ~~--~l~~h~ 81 (89)
.+ .+.++.
T Consensus 293 ~k~~~~~g~e 302 (514)
T KOG2055|consen 293 TKLKPPYGVE 302 (514)
T ss_pred ccccCCCCcc
Confidence 55 344544
No 220
>KOG0650|consensus
Probab=98.00 E-value=1.4e-05 Score=57.33 Aligned_cols=63 Identities=19% Similarity=0.336 Sum_probs=54.0
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCC-CCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEe
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHM-TSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~-~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd 67 (89)
.+|.+++.+|.|.-|++|+.|+.++.||.. +.+....+.-|...++. .+||+|+.|+++.|+-
T Consensus 608 kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfh 678 (733)
T KOG0650|consen 608 KWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFH 678 (733)
T ss_pred eeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEe
Confidence 468999999999999999999999999986 44566667778777776 8999999999999874
No 221
>KOG1188|consensus
Probab=97.99 E-value=3.3e-05 Score=52.18 Aligned_cols=75 Identities=12% Similarity=0.111 Sum_probs=54.1
Q ss_pred cCCcEEEEEEccC-CCEEEEEeCCCcEEEEeCCCC-eEee--EecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 3 LRYYIFLLQTSQV-GQVLAIGTARGNLTVYNHMTS-KRVP--VLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 3 ~~~~i~~~~~spd-g~~la~g~~~g~v~iwd~~~~-~~~~--~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
|.|.|+++.|+|+ -++|++|+.||-|.+||+..- +.-. ..-.|...|.+ +.|.+-+-..+..+|+++.
T Consensus 164 H~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~ 243 (376)
T KOG1188|consen 164 HNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELED 243 (376)
T ss_pred ccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccC
Confidence 6678999999995 469999999999999998642 1111 11123333433 5788889999999999988
Q ss_pred CEEEeee
Q psy12376 71 SKRVPVL 77 (89)
Q Consensus 71 ~~~~~~l 77 (89)
+..+..+
T Consensus 244 ~~~~~~~ 250 (376)
T KOG1188|consen 244 GSEETWL 250 (376)
T ss_pred CChhhcc
Confidence 7654433
No 222
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.90 E-value=0.00038 Score=48.43 Aligned_cols=73 Identities=22% Similarity=0.173 Sum_probs=47.5
Q ss_pred CcEEEEEEccCCCEEEEEe---CCCcEEEEeCCCCeE--eeEecCCccee-ec---cEEEE-EeCCC--CEEEEeCCCCE
Q psy12376 5 YYIFLLQTSQVGQVLAIGT---ARGNLTVYNHMTSKR--VPVLGKHTNTI-VG---QVLAI-GTARG--NLTVYNHMTSK 72 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~---~~g~v~iwd~~~~~~--~~~~~~h~~~i-~~---~~las-~s~d~--~v~iwd~~~~~ 72 (89)
..+...+|||||+.||..+ .+..+.+|+..+|+. +..+.++...+ .+ +.|+. .+.++ .|++||+.+++
T Consensus 199 ~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~ 278 (429)
T PRK03629 199 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 278 (429)
T ss_pred CceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence 4578999999999998654 245799999988753 23334443322 22 45554 34455 58999998776
Q ss_pred EEeee
Q psy12376 73 RVPVL 77 (89)
Q Consensus 73 ~~~~l 77 (89)
.....
T Consensus 279 ~~~lt 283 (429)
T PRK03629 279 IRQVT 283 (429)
T ss_pred EEEcc
Confidence 65543
No 223
>KOG4547|consensus
Probab=97.90 E-value=7.8e-05 Score=52.99 Aligned_cols=62 Identities=21% Similarity=0.222 Sum_probs=51.0
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------------cEEEEEeCCCCEEEEeCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------------~~las~s~d~~v~iwd~~ 69 (89)
.+.++..+|||..|++++ ++|.+||+.+++.+..|++|.++|++ ..|.++..+.-+.+|-++
T Consensus 146 ~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 146 LVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred ccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence 478899999999999875 78999999999999999999999988 245555556667777664
No 224
>KOG1517|consensus
Probab=97.89 E-value=4.3e-05 Score=57.97 Aligned_cols=66 Identities=26% Similarity=0.411 Sum_probs=50.5
Q ss_pred EEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCe---EeeEecCCcce--eec--------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 7 IFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSK---RVPVLGKHTNT--IVG--------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 7 i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~---~~~~~~~h~~~--i~~--------~~las~s~d~~v~iwd~~~~~ 72 (89)
++++.-+. .|..+|+|..||.|++||.+.-. .+..+..|+.. |.- ..|++|+.||.|++||++...
T Consensus 1211 vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~ 1290 (1387)
T KOG1517|consen 1211 VTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSS 1290 (1387)
T ss_pred ceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCc
Confidence 55554443 47999999999999999987532 35566778776 543 569999999999999998743
No 225
>KOG3881|consensus
Probab=97.87 E-value=0.00011 Score=50.45 Aligned_cols=83 Identities=18% Similarity=0.168 Sum_probs=66.6
Q ss_pred CCcEEEEEEccC--CCEEEEEeCCCcEEEEeCCCCe-EeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 4 RYYIFLLQTSQV--GQVLAIGTARGNLTVYNHMTSK-RVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 4 ~~~i~~~~~spd--g~~la~g~~~g~v~iwd~~~~~-~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+=+++.+.|-+. ...||+++.-+.+++||++.++ .+.++.-...+|.+ +++.+|..-+.+..+|++.++.
T Consensus 202 PvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl 281 (412)
T KOG3881|consen 202 PVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKL 281 (412)
T ss_pred eeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCcee
Confidence 335778899887 7899999999999999998764 45666555566666 8999999999999999998887
Q ss_pred Eee-eCCCCCCCcC
Q psy12376 74 VPV-LGKHTKSKPS 86 (89)
Q Consensus 74 ~~~-l~~h~~~~~~ 86 (89)
... +.+.++++++
T Consensus 282 ~g~~~kg~tGsirs 295 (412)
T KOG3881|consen 282 LGCGLKGITGSIRS 295 (412)
T ss_pred eccccCCccCCcce
Confidence 655 7777777665
No 226
>KOG1587|consensus
Probab=97.85 E-value=3.2e-05 Score=55.53 Aligned_cols=73 Identities=8% Similarity=0.152 Sum_probs=53.5
Q ss_pred CCcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCC-CCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCC
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHM-TSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~-~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~ 71 (89)
+.|.++++++.++|-+..+...+.|-.++||.-. ....+..+..+...+.+ ..|+++..||.+.|||+...
T Consensus 395 ~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~ 474 (555)
T KOG1587|consen 395 ITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD 474 (555)
T ss_pred cccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc
Confidence 3577889999999988755555559999999876 44444444444444443 78999999999999999654
Q ss_pred EE
Q psy12376 72 KR 73 (89)
Q Consensus 72 ~~ 73 (89)
..
T Consensus 475 ~~ 476 (555)
T KOG1587|consen 475 DE 476 (555)
T ss_pred cc
Confidence 33
No 227
>KOG2139|consensus
Probab=97.85 E-value=9.1e-05 Score=50.68 Aligned_cols=65 Identities=14% Similarity=0.259 Sum_probs=50.0
Q ss_pred CcEEEEEEccCCCEEEEEeC-CCcEEEEeCCCCeEeeEecCCccee----ec---cEEEEEeCCCCEEEEeCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTA-RGNLTVYNHMTSKRVPVLGKHTNTI----VG---QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~-~g~v~iwd~~~~~~~~~~~~h~~~i----~~---~~las~s~d~~v~iwd~~ 69 (89)
.+|++++|.+||..+++++- |..|.|||..++..++......+.+ .+ .+|+++.-|+..++|+..
T Consensus 196 ~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~ 268 (445)
T KOG2139|consen 196 NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQEN 268 (445)
T ss_pred ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhc
Confidence 46999999999999988775 6699999999987766542222222 12 788899999999999653
No 228
>PRK01742 tolB translocation protein TolB; Provisional
Probab=97.81 E-value=0.00017 Score=50.06 Aligned_cols=79 Identities=9% Similarity=0.042 Sum_probs=53.7
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCc--ceeec---cEEEEEeCCCCEEEEeC--CCCEEEeeeCCC
Q psy12376 8 FLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHT--NTIVG---QVLAIGTARGNLTVYNH--MTSKRVPVLGKH 80 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~--~~i~~---~~las~s~d~~v~iwd~--~~~~~~~~l~~h 80 (89)
...+|||||++|+..+.++ +.+||..+++.......+. .+..+ ++|+.++.++...+|++ .++.....+..|
T Consensus 336 ~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~ 414 (429)
T PRK01742 336 YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTFLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGS 414 (429)
T ss_pred CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCC
Confidence 4578999999998887754 6669998876533222221 11122 78999999999988876 357777777777
Q ss_pred CCCCcCC
Q psy12376 81 TKSKPST 87 (89)
Q Consensus 81 ~~~~~~~ 87 (89)
...+..+
T Consensus 415 ~g~~~~p 421 (429)
T PRK01742 415 DGQVKFP 421 (429)
T ss_pred CCCCCCc
Confidence 7655543
No 229
>KOG0280|consensus
Probab=97.77 E-value=0.00022 Score=47.58 Aligned_cols=63 Identities=16% Similarity=0.210 Sum_probs=50.7
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE--eeEecCCcceeec--------cEEEEEeCCCCEEEEeCC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR--VPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~--~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~ 69 (89)
..++.|++.|..++++..+|.+.+-+...... +..+++|.-+... +++.+||+|+.+..||++
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R 196 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIR 196 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEec
Confidence 35789999999999999999999655544332 3467788776554 799999999999999998
No 230
>KOG1240|consensus
Probab=97.76 E-value=0.00019 Score=55.11 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=47.7
Q ss_pred cCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCC--Ce--Eee---EecCCcceeec-------cEEEEEeCCCCEEEEe
Q psy12376 3 LRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMT--SK--RVP---VLGKHTNTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 3 ~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~--~~--~~~---~~~~h~~~i~~-------~~las~s~d~~v~iwd 67 (89)
|...+..++.++ ++.+|++|+.||+|++||.+. |+ ..+ .+.....++.+ ..+|.++.||.|++.+
T Consensus 1047 hs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~ 1126 (1431)
T KOG1240|consen 1047 HSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLR 1126 (1431)
T ss_pred ccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEE
Confidence 445556666665 569999999999999999864 21 111 22212333333 7899999999999999
Q ss_pred CCC
Q psy12376 68 HMT 70 (89)
Q Consensus 68 ~~~ 70 (89)
++.
T Consensus 1127 id~ 1129 (1431)
T KOG1240|consen 1127 IDH 1129 (1431)
T ss_pred ccc
Confidence 965
No 231
>KOG2321|consensus
Probab=97.76 E-value=0.00011 Score=52.79 Aligned_cols=69 Identities=23% Similarity=0.382 Sum_probs=53.4
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec------CCcc-----eeec-------cEEEEEeCCCCEEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG------KHTN-----TIVG-------QVLAIGTARGNLTVY 66 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~------~h~~-----~i~~-------~~las~s~d~~v~iw 66 (89)
..+.++..++--..||+|+.+|.|..||.++...+..+. .|.+ .|++ -.++.|+.+|.|.||
T Consensus 176 ~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iy 255 (703)
T KOG2321|consen 176 GELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIY 255 (703)
T ss_pred ccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEE
Confidence 468899999988899999999999999999865544432 1222 1333 479999999999999
Q ss_pred eCCCCEE
Q psy12376 67 NHMTSKR 73 (89)
Q Consensus 67 d~~~~~~ 73 (89)
|++..+.
T Consensus 256 DLRa~~p 262 (703)
T KOG2321|consen 256 DLRASKP 262 (703)
T ss_pred EcccCCc
Confidence 9986543
No 232
>KOG1334|consensus
Probab=97.73 E-value=4.1e-05 Score=53.82 Aligned_cols=83 Identities=16% Similarity=0.179 Sum_probs=61.5
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCC--C----------eEeeE-ecCCcc-----eeec-----cEEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMT--S----------KRVPV-LGKHTN-----TIVG-----QVLAIGTARGN 62 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~--~----------~~~~~-~~~h~~-----~i~~-----~~las~s~d~~ 62 (89)
.|++++|+.+|.-|+++-.|-.|++|...- | ..+.. +.+|.. .++. .|++|||+=|.
T Consensus 338 ~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGh 417 (559)
T KOG1334|consen 338 NITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGH 417 (559)
T ss_pred cceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccce
Confidence 399999999988888888888999996543 3 12333 677754 2222 89999999999
Q ss_pred EEEEeCCCCEEEeeeCCCCCCCcCCC
Q psy12376 63 LTVYNHMTSKRVPVLGKHTKSKPSTE 88 (89)
Q Consensus 63 v~iwd~~~~~~~~~l~~h~~~~~~~~ 88 (89)
|.||+-.+++.+..|.+-..-|++-|
T Consensus 418 IFiW~K~t~eii~~MegDr~VVNCLE 443 (559)
T KOG1334|consen 418 IFIWDKKTGEIIRFMEGDRHVVNCLE 443 (559)
T ss_pred EEEEecchhHHHHHhhcccceEeccC
Confidence 99999999988887765444555543
No 233
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.72 E-value=0.00043 Score=48.06 Aligned_cols=72 Identities=14% Similarity=0.038 Sum_probs=46.9
Q ss_pred CCcEEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeEee--EecCCcce-eec---c-EEEEEeCCC--CEEEEeCCCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTAR---GNLTVYNHMTSKRVP--VLGKHTNT-IVG---Q-VLAIGTARG--NLTVYNHMTS 71 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~---g~v~iwd~~~~~~~~--~~~~h~~~-i~~---~-~las~s~d~--~v~iwd~~~~ 71 (89)
...+.+.+|+|||+.|+..+.. ..|.+||..+++... .+.++... ... + ++++.+.++ .|++||+.++
T Consensus 203 ~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g 282 (433)
T PRK04922 203 AEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSR 282 (433)
T ss_pred CCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCC
Confidence 3457889999999999987643 469999998876432 22222221 111 4 444556655 5999999877
Q ss_pred EEEe
Q psy12376 72 KRVP 75 (89)
Q Consensus 72 ~~~~ 75 (89)
+...
T Consensus 283 ~~~~ 286 (433)
T PRK04922 283 QLTR 286 (433)
T ss_pred CeEE
Confidence 6544
No 234
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.71 E-value=0.00055 Score=47.52 Aligned_cols=65 Identities=20% Similarity=0.104 Sum_probs=42.5
Q ss_pred CCcEEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeEeeE--ecCCcc-eeec---cEE-EEEeCCCCEEEEeC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTAR---GNLTVYNHMTSKRVPV--LGKHTN-TIVG---QVL-AIGTARGNLTVYNH 68 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~---g~v~iwd~~~~~~~~~--~~~h~~-~i~~---~~l-as~s~d~~v~iwd~ 68 (89)
...+.+.+|||||+.||..+.. ..|.+||..+++.... +.++.. +..+ +.| ++.+.++...||.+
T Consensus 195 ~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 269 (427)
T PRK02889 195 PEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTV 269 (427)
T ss_pred CCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEEE
Confidence 4567889999999999877643 3599999988865332 222222 2222 444 46678887666654
No 235
>KOG4227|consensus
Probab=97.70 E-value=0.00039 Score=48.30 Aligned_cols=70 Identities=16% Similarity=0.163 Sum_probs=56.1
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCC--cceeec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKH--TNTIVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h--~~~i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
|+..|.|++|.....++.+|..+++|.+.|+.+.+.+..+... .+.|.. +.|++.+.++-|.+||.+..+
T Consensus 104 H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 104 HRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred cccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence 4567999999999999999999999999999988766554311 123332 899999999999999997544
No 236
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.58 E-value=0.0015 Score=44.57 Aligned_cols=70 Identities=19% Similarity=0.059 Sum_probs=45.1
Q ss_pred CcEEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeEeeEecCCcceee----c---cEE-EEEeCCC--CEEEEeCCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTAR---GNLTVYNHMTSKRVPVLGKHTNTIV----G---QVL-AIGTARG--NLTVYNHMTS 71 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~---g~v~iwd~~~~~~~~~~~~h~~~i~----~---~~l-as~s~d~--~v~iwd~~~~ 71 (89)
..+...+|||||++||..... ..|++||+.+++.... ..+..... . +.| ++.+.++ .|++||+.++
T Consensus 190 ~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~ 268 (417)
T TIGR02800 190 EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGK 268 (417)
T ss_pred CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCC
Confidence 347788999999999887654 4799999988754322 22222111 1 444 4555444 5999999876
Q ss_pred EEEe
Q psy12376 72 KRVP 75 (89)
Q Consensus 72 ~~~~ 75 (89)
....
T Consensus 269 ~~~~ 272 (417)
T TIGR02800 269 QLTR 272 (417)
T ss_pred CEEE
Confidence 5543
No 237
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.57 E-value=0.0016 Score=45.02 Aligned_cols=72 Identities=18% Similarity=0.099 Sum_probs=46.1
Q ss_pred CCcEEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeEee--EecCCcc-eeec---cEEE-EEeCCC--CEEEEeCCCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTAR---GNLTVYNHMTSKRVP--VLGKHTN-TIVG---QVLA-IGTARG--NLTVYNHMTS 71 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~---g~v~iwd~~~~~~~~--~~~~h~~-~i~~---~~la-s~s~d~--~v~iwd~~~~ 71 (89)
...+...+|||||+.||..+.+ ..|.+||..+++... ...++.. +..+ ++|+ +.+.++ .|++||+.++
T Consensus 198 ~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~ 277 (430)
T PRK00178 198 REPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASR 277 (430)
T ss_pred CCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 3457889999999999876543 369999998875432 2222222 2222 4444 555555 5888899877
Q ss_pred EEEe
Q psy12376 72 KRVP 75 (89)
Q Consensus 72 ~~~~ 75 (89)
+...
T Consensus 278 ~~~~ 281 (430)
T PRK00178 278 QLSR 281 (430)
T ss_pred CeEE
Confidence 6543
No 238
>KOG2695|consensus
Probab=97.53 E-value=0.0001 Score=50.23 Aligned_cols=77 Identities=19% Similarity=0.264 Sum_probs=58.0
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe-----EeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK-----RVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~-----~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~ 72 (89)
.|.+++|.-.++.+..|+.+|.|..+|.+.+. +...+ -|.+.|++ .+|.+.+.+|.|.+||++--+
T Consensus 254 DVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K 332 (425)
T KOG2695|consen 254 DVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATK 332 (425)
T ss_pred hHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhh
Confidence 36677888888999999999999999998641 12222 36777776 677778999999999998544
Q ss_pred E---EeeeCCCCCC
Q psy12376 73 R---VPVLGKHTKS 83 (89)
Q Consensus 73 ~---~~~l~~h~~~ 83 (89)
+ +....+|.+.
T Consensus 333 ~~~~V~qYeGHvN~ 346 (425)
T KOG2695|consen 333 CKKSVMQYEGHVNL 346 (425)
T ss_pred cccceeeeeccccc
Confidence 4 6666777653
No 239
>KOG1963|consensus
Probab=97.53 E-value=0.00057 Score=50.61 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=48.8
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~ 68 (89)
|.++|.+++||+||.+|.+|+..|.+.+|...+++ ...+..-.++|.. .+.+..-.|+.|.+-..
T Consensus 250 H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~ 321 (792)
T KOG1963|consen 250 HHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA 321 (792)
T ss_pred cccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence 45689999999999999999999999999999877 2333333455543 55555566777777655
No 240
>KOG2111|consensus
Probab=97.52 E-value=0.00092 Score=45.02 Aligned_cols=75 Identities=15% Similarity=0.328 Sum_probs=54.1
Q ss_pred EEEEEEccCCCEEEE-EeCCCcEEEEeCCCCeE--eeEecCCcceeec-------cEEEEEeCCCC-EEEEeCCCCEEEe
Q psy12376 7 IFLLQTSQVGQVLAI-GTARGNLTVYNHMTSKR--VPVLGKHTNTIVG-------QVLAIGTARGN-LTVYNHMTSKRVP 75 (89)
Q Consensus 7 i~~~~~spdg~~la~-g~~~g~v~iwd~~~~~~--~~~~~~h~~~i~~-------~~las~s~d~~-v~iwd~~~~~~~~ 75 (89)
+.++.-+-+-..||. |-..|.|+|-|....+. -..+.+|...|.| .++||+|..|+ |+|||.++|..+.
T Consensus 139 lC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~ 218 (346)
T KOG2111|consen 139 LCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQ 218 (346)
T ss_pred eEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEee
Confidence 333333333345554 34578999999876554 2456789999988 79999999997 6899999999988
Q ss_pred eeCCCC
Q psy12376 76 VLGKHT 81 (89)
Q Consensus 76 ~l~~h~ 81 (89)
.+.+-.
T Consensus 219 E~RRG~ 224 (346)
T KOG2111|consen 219 ELRRGV 224 (346)
T ss_pred eeecCC
Confidence 875433
No 241
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.51 E-value=0.0016 Score=43.43 Aligned_cols=65 Identities=9% Similarity=0.083 Sum_probs=43.5
Q ss_pred cEEEEEEccCCCEEEEEeC-CCcEEEEeCCC-Ce---EeeEecC----Ccceeec--cE-EEEEeCCCCEEEEeCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTA-RGNLTVYNHMT-SK---RVPVLGK----HTNTIVG--QV-LAIGTARGNLTVYNHMT 70 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~-~g~v~iwd~~~-~~---~~~~~~~----h~~~i~~--~~-las~s~d~~v~iwd~~~ 70 (89)
....++|+|+|++|+++.. ++.|.+|+..+ +. .+..+.+ |.-.+.. ++ +++...++.|.+||+.+
T Consensus 81 ~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~ 157 (330)
T PRK11028 81 SPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD 157 (330)
T ss_pred CceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence 4578999999998877664 88999999863 32 2222222 2212221 44 46677789999999975
No 242
>KOG1354|consensus
Probab=97.48 E-value=0.00083 Score=45.91 Aligned_cols=66 Identities=14% Similarity=0.175 Sum_probs=48.9
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCC-Ce----EeeEecCCcceee----------------c-----cEEEEEe
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMT-SK----RVPVLGKHTNTIV----------------G-----QVLAIGT 58 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~-~~----~~~~~~~h~~~i~----------------~-----~~las~s 58 (89)
+-|+++.|..+|++||+|..+|.|.+|.... .+ ....++.|....- + ..+...+
T Consensus 26 diis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlst 105 (433)
T KOG1354|consen 26 DIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLST 105 (433)
T ss_pred cceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEec
Confidence 5589999999999999999999999998643 22 3445666643111 1 4555667
Q ss_pred CCCCEEEEeCCC
Q psy12376 59 ARGNLTVYNHMT 70 (89)
Q Consensus 59 ~d~~v~iwd~~~ 70 (89)
.|.++.+|-+..
T Consensus 106 NdktiKlWKi~e 117 (433)
T KOG1354|consen 106 NDKTIKLWKIRE 117 (433)
T ss_pred CCcceeeeeeec
Confidence 999999999964
No 243
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.47 E-value=0.003 Score=44.02 Aligned_cols=79 Identities=10% Similarity=0.070 Sum_probs=50.0
Q ss_pred EEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeEeeEecC-Cc--ceeec---cEEEEEeCCCC---EEEEeCCCCEEE
Q psy12376 7 IFLLQTSQVGQVLAIGTAR---GNLTVYNHMTSKRVPVLGK-HT--NTIVG---QVLAIGTARGN---LTVYNHMTSKRV 74 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~---g~v~iwd~~~~~~~~~~~~-h~--~~i~~---~~las~s~d~~---v~iwd~~~~~~~ 74 (89)
.....|||||++|+..+.+ ..|.+||..+++. ..+.. +. .+-.+ ++|+.++.++. ++++++. +...
T Consensus 333 ~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-~~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~-G~~~ 410 (429)
T PRK03629 333 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTD-GRFK 410 (429)
T ss_pred ccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECC-CCCe
Confidence 4568999999998876543 3588899988764 33332 11 12222 67777777765 6777874 5545
Q ss_pred eeeCCCCCCCcCC
Q psy12376 75 PVLGKHTKSKPST 87 (89)
Q Consensus 75 ~~l~~h~~~~~~~ 87 (89)
..+..|...+..|
T Consensus 411 ~~l~~~~~~~~~p 423 (429)
T PRK03629 411 ARLPATDGQVKFP 423 (429)
T ss_pred EECccCCCCcCCc
Confidence 5566676655443
No 244
>KOG2079|consensus
Probab=97.47 E-value=0.00045 Score=52.58 Aligned_cols=63 Identities=21% Similarity=0.337 Sum_probs=47.8
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec----------cEEEEEeCCCCEEEEeC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG----------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~----------~~las~s~d~~v~iwd~ 68 (89)
..++++++|+.||..++.|-.+|.|.+||+..++.++.+..|..+... ..+.++..-|. +|++
T Consensus 130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 457999999999999999999999999999998888877655444333 34555555554 5554
No 245
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.46 E-value=0.0018 Score=45.42 Aligned_cols=71 Identities=15% Similarity=0.049 Sum_probs=44.8
Q ss_pred CcEEEEEEccCCCEEEEEeC-CC--cEEEEeCCCCeEe--eEecCCcc-eeec---cEE-EEEeCCCC--EEEEeCCCCE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTA-RG--NLTVYNHMTSKRV--PVLGKHTN-TIVG---QVL-AIGTARGN--LTVYNHMTSK 72 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~-~g--~v~iwd~~~~~~~--~~~~~h~~-~i~~---~~l-as~s~d~~--v~iwd~~~~~ 72 (89)
..+....|||||+.|+..+. ++ .|.+||..+++.. ..+.++.. +..+ +.| ++.+.++. |+++|+.+++
T Consensus 218 ~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~ 297 (448)
T PRK04792 218 EPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA 297 (448)
T ss_pred CcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC
Confidence 34678899999999887654 33 6889998877642 22333322 2222 444 45566665 7888888776
Q ss_pred EEe
Q psy12376 73 RVP 75 (89)
Q Consensus 73 ~~~ 75 (89)
...
T Consensus 298 ~~~ 300 (448)
T PRK04792 298 LTR 300 (448)
T ss_pred eEE
Confidence 544
No 246
>KOG2321|consensus
Probab=97.45 E-value=0.00042 Score=49.86 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=55.1
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
...+.++.-..-|.+++....|+-++...|+.+..+....+.+++ .+||+|+.||.|.+||.++..+...+.
T Consensus 136 GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~ 214 (703)
T KOG2321|consen 136 GRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLD 214 (703)
T ss_pred CccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeee
Confidence 445666654444555555668999999999998888766666665 799999999999999999887776653
No 247
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.44 E-value=0.00042 Score=30.09 Aligned_cols=29 Identities=21% Similarity=0.461 Sum_probs=20.9
Q ss_pred eeEecCCcceeec-------cEEEEEeCCCCEEEEe
Q psy12376 39 VPVLGKHTNTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 39 ~~~~~~h~~~i~~-------~~las~s~d~~v~iwd 67 (89)
...+..|...|.+ .++++++.|+.+++||
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3344445555544 6899999999999996
No 248
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.43 E-value=0.0021 Score=43.60 Aligned_cols=67 Identities=16% Similarity=0.110 Sum_probs=45.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEecCC-----cceeec-cEEEEEeCCCCEEEEeCCCCEEEeeeCCCC
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVLGKH-----TNTIVG-QVLAIGTARGNLTVYNHMTSKRVPVLGKHT 81 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h-----~~~i~~-~~las~s~d~~v~iwd~~~~~~~~~l~~h~ 81 (89)
++..+..++.+|.+..+|..+|+.+...... ..++.. .++..++.||.|+++|..+++.+..+.-+.
T Consensus 278 ~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~ 350 (377)
T TIGR03300 278 DDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFEGYLHWLSREDGSFVARLKTDG 350 (377)
T ss_pred eCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC
Confidence 4566777778888888888888766544211 122222 677888888889999888888776654333
No 249
>KOG1354|consensus
Probab=97.41 E-value=0.00059 Score=46.59 Aligned_cols=69 Identities=16% Similarity=0.165 Sum_probs=52.4
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeC-CCCeEeeEecCCcc------------ee----ec------cEEEEEeCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNH-MTSKRVPVLGKHTN------------TI----VG------QVLAIGTARG 61 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~-~~~~~~~~~~~h~~------------~i----~~------~~las~s~d~ 61 (89)
..|+.+.||++|+++++-+. -+|.+||. ...+.+..++-|.. .| .| .++.+||..+
T Consensus 273 sSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n 351 (433)
T KOG1354|consen 273 SSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNN 351 (433)
T ss_pred hhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccc
Confidence 35889999999999998653 49999998 56677777666632 11 11 5999999999
Q ss_pred CEEEEeCCCCEEE
Q psy12376 62 NLTVYNHMTSKRV 74 (89)
Q Consensus 62 ~v~iwd~~~~~~~ 74 (89)
.++++++..|...
T Consensus 352 ~frvf~~~~gsk~ 364 (433)
T KOG1354|consen 352 VFRVFNLARGSKE 364 (433)
T ss_pred eEEEecCCCCcce
Confidence 9999998655443
No 250
>KOG4532|consensus
Probab=97.40 E-value=0.0033 Score=41.87 Aligned_cols=75 Identities=13% Similarity=0.083 Sum_probs=56.1
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe-EeeEe----cCCcceeec---------cEEEEEeCCCCEEEEeCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK-RVPVL----GKHTNTIVG---------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~-~~~~~----~~h~~~i~~---------~~las~s~d~~v~iwd~~ 69 (89)
.|.-.+..||.....+|+++.||.+.|||++.-. .+... ..|++.++. .+|....-=+.+.+-|++
T Consensus 203 ~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R 282 (344)
T KOG4532|consen 203 SDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTR 282 (344)
T ss_pred CCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcc
Confidence 3445688999999999999999999999998743 33322 237777664 577777777889999999
Q ss_pred CCEEEeeeC
Q psy12376 70 TSKRVPVLG 78 (89)
Q Consensus 70 ~~~~~~~l~ 78 (89)
+....+.+.
T Consensus 283 ~~~~~q~I~ 291 (344)
T KOG4532|consen 283 NYVNHQVIV 291 (344)
T ss_pred cCceeeEEe
Confidence 877655543
No 251
>KOG1517|consensus
Probab=97.39 E-value=0.00065 Score=51.90 Aligned_cols=71 Identities=17% Similarity=0.304 Sum_probs=49.9
Q ss_pred cCCc--EEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEee--EecCC---cceeec-------cEEEEEeCCCCEEEEe
Q psy12376 3 LRYY--IFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVP--VLGKH---TNTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 3 ~~~~--i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~--~~~~h---~~~i~~-------~~las~s~d~~v~iwd 67 (89)
|.++ |..+.+-+.|- .|++|+.+|.|.+||++...... ....| .+.+++ ..+|+|+. +.+.||+
T Consensus 1253 h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~ 1331 (1387)
T KOG1517|consen 1253 HNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYS 1331 (1387)
T ss_pred cCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEe
Confidence 4444 88999998776 59999999999999998732211 11111 222444 78999988 9999999
Q ss_pred CCCCEEEe
Q psy12376 68 HMTSKRVP 75 (89)
Q Consensus 68 ~~~~~~~~ 75 (89)
+. |+.+.
T Consensus 1332 ~~-G~~l~ 1338 (1387)
T KOG1517|consen 1332 LS-GEQLN 1338 (1387)
T ss_pred cC-hhhhc
Confidence 96 34333
No 252
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.36 E-value=0.0034 Score=41.79 Aligned_cols=63 Identities=6% Similarity=-0.020 Sum_probs=40.4
Q ss_pred EEEEEEccCCCEEE-EEeCCCcEEEEeCCCCeEee-------EecCCcc--eeec----cEEEEEeC-CCCEEEEeCC
Q psy12376 7 IFLLQTSQVGQVLA-IGTARGNLTVYNHMTSKRVP-------VLGKHTN--TIVG----QVLAIGTA-RGNLTVYNHM 69 (89)
Q Consensus 7 i~~~~~spdg~~la-~g~~~g~v~iwd~~~~~~~~-------~~~~h~~--~i~~----~~las~s~-d~~v~iwd~~ 69 (89)
..+++++|+|++++ +...++.|.+||+.+...+. ....... .+.. ++++++.. +++|.+|++.
T Consensus 128 ~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~ 205 (330)
T PRK11028 128 CHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK 205 (330)
T ss_pred ccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence 46788999999885 55567899999997632221 1111111 1211 56655544 9999999996
No 253
>KOG1240|consensus
Probab=97.36 E-value=0.0015 Score=50.45 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=55.6
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec-CCcceee---c-------c-EEEEEe-CCCCEEEEeCCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG-KHTNTIV---G-------Q-VLAIGT-ARGNLTVYNHMTS 71 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~-~h~~~i~---~-------~-~las~s-~d~~v~iwd~~~~ 71 (89)
+.|++++.+|-++++++|+..|.+.+||+|=+..+..+. ++..+|+ + . .+++++ ..+.|.+||..+|
T Consensus 1196 G~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g 1275 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETG 1275 (1431)
T ss_pred cceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccC
Confidence 359999999999999999999999999998766665543 2223332 1 2 344444 6889999999988
Q ss_pred EEEeeeCC
Q psy12376 72 KRVPVLGK 79 (89)
Q Consensus 72 ~~~~~l~~ 79 (89)
.+...+-.
T Consensus 1276 ~~~~vl~~ 1283 (1431)
T KOG1240|consen 1276 LRQTVLWA 1283 (1431)
T ss_pred cceEEEEc
Confidence 87776643
No 254
>KOG1645|consensus
Probab=97.34 E-value=0.00074 Score=46.81 Aligned_cols=66 Identities=18% Similarity=0.198 Sum_probs=53.9
Q ss_pred cEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 6 ~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
-|..++|||..+ .+..++-+.+|.|.|+++.-.+..+..|...-.| .+|-.|-.+|.|.|||++..
T Consensus 195 ~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 195 FIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred hhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence 478899999988 6788888999999999998777777666433333 78999999999999999753
No 255
>PRK05137 tolB translocation protein TolB; Provisional
Probab=97.23 E-value=0.005 Score=42.82 Aligned_cols=70 Identities=14% Similarity=0.118 Sum_probs=43.4
Q ss_pred CcEEEEEEccCCCEEEE-EeCCC--cEEEEeCCCCeEeeEecCCcceee----c---cEEEEEeC-CC--CEEEEeCCCC
Q psy12376 5 YYIFLLQTSQVGQVLAI-GTARG--NLTVYNHMTSKRVPVLGKHTNTIV----G---QVLAIGTA-RG--NLTVYNHMTS 71 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~-g~~~g--~v~iwd~~~~~~~~~~~~h~~~i~----~---~~las~s~-d~--~v~iwd~~~~ 71 (89)
..+...+|||||+.|+. .+.+| .|.+||..+++. ..+..+..... . +.|+..+. ++ .|++||+.++
T Consensus 246 g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~ 324 (435)
T PRK05137 246 GMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGS 324 (435)
T ss_pred CcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCC
Confidence 34667899999998764 44455 477889887754 44544433221 1 55665553 33 6888888765
Q ss_pred EEEe
Q psy12376 72 KRVP 75 (89)
Q Consensus 72 ~~~~ 75 (89)
....
T Consensus 325 ~~~~ 328 (435)
T PRK05137 325 NPRR 328 (435)
T ss_pred CeEE
Confidence 5433
No 256
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.22 E-value=0.0089 Score=34.63 Aligned_cols=57 Identities=18% Similarity=0.293 Sum_probs=40.8
Q ss_pred EEEccCC-CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCC
Q psy12376 10 LQTSQVG-QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 10 ~~~spdg-~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~ 69 (89)
+.|.-|| +.|++|+.|..|++|+-. +.+..+..... +.+ ..|+.+-.+|+|-+|+-.
T Consensus 8 ~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~-v~~L~~~~~~~F~Y~l~NGTVGvY~~~ 71 (111)
T PF14783_consen 8 FDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITETDK-VTSLCSLGGGRFAYALANGTVGVYDRS 71 (111)
T ss_pred EecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecccc-eEEEEEcCCCEEEEEecCCEEEEEeCc
Confidence 3444455 499999999999999754 45566654332 222 789999999999888753
No 257
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.19 E-value=0.007 Score=42.38 Aligned_cols=72 Identities=17% Similarity=0.127 Sum_probs=56.8
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc----eeec----------------------cEEEEEeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN----TIVG----------------------QVLAIGTA 59 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~----~i~~----------------------~~las~s~ 59 (89)
.+.++..+|++.+.|+...=|-|.++|..++..++-++|..+ .+.. -+++-+-.
T Consensus 309 ~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyapr 388 (415)
T PF14655_consen 309 EGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPR 388 (415)
T ss_pred eEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEecc
Confidence 488999999999999988889999999999877666555432 1111 35677788
Q ss_pred CCCEEEEeCCCCEEEeee
Q psy12376 60 RGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 60 d~~v~iwd~~~~~~~~~l 77 (89)
-|-|.||+++.|.++..+
T Consensus 389 Rg~lEvW~~~~g~Rv~a~ 406 (415)
T PF14655_consen 389 RGILEVWSMRQGPRVAAF 406 (415)
T ss_pred CCeEEEEecCCCCEEEEE
Confidence 999999999999888765
No 258
>KOG4640|consensus
Probab=97.17 E-value=0.0035 Score=45.56 Aligned_cols=72 Identities=15% Similarity=0.184 Sum_probs=59.5
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceee-c-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIV-G-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~-~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+-.+.-+.|+|.-..+|.++.+|++.+.... .+.+..+.-|+..+. + ++||.|=.||+|++-|++.+..+.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 4457889999999999999999999998776 566777765666655 3 899999999999999998876655
Q ss_pred e
Q psy12376 76 V 76 (89)
Q Consensus 76 ~ 76 (89)
-
T Consensus 99 ~ 99 (665)
T KOG4640|consen 99 S 99 (665)
T ss_pred c
Confidence 3
No 259
>KOG4640|consensus
Probab=97.11 E-value=0.0013 Score=47.63 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=30.9
Q ss_pred cEE-EEEEccCCCEEEEEeCCCcEEEEeCCCCeEee
Q psy12376 6 YIF-LLQTSQVGQVLAIGTARGNLTVYNHMTSKRVP 40 (89)
Q Consensus 6 ~i~-~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~ 40 (89)
.++ +++|.|||+.||.|-.||+|.+-|+..+..+.
T Consensus 63 ~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 63 NVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 355 99999999999999999999999998876544
No 260
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.10 E-value=0.0067 Score=38.18 Aligned_cols=63 Identities=21% Similarity=0.215 Sum_probs=47.9
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCeEeeEecCC----cceeec-cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 14 QVGQVLAIGTARGNLTVYNHMTSKRVPVLGKH----TNTIVG-QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 14 pdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h----~~~i~~-~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
+++..+.+++.++.+..||+.+|+.+...... ..++.. ..++.++.|+.++.+|..+|+....
T Consensus 34 ~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~ 101 (238)
T PF13360_consen 34 PDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVYVGTSDGSLYALDAKTGKVLWS 101 (238)
T ss_dssp EETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEEEEETTSEEEEEETTTSCEEEE
T ss_pred EeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeecccccccccceeeeEecccCCcceeee
Confidence 35667777789999999999999987766531 112222 6777777888999999999988776
No 261
>KOG4190|consensus
Probab=97.08 E-value=0.00034 Score=50.54 Aligned_cols=74 Identities=7% Similarity=0.130 Sum_probs=50.3
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC-Ce------EeeEecCCcceeec-----cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT-SK------RVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~-~~------~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~ 69 (89)
+|+..|..++--.+.+-+++++.|.+|++|.++. |. +...++.|+.+|.+ ..-..++.|+.+.+||.-
T Consensus 733 GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPF 812 (1034)
T KOG4190|consen 733 GHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPF 812 (1034)
T ss_pred CcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcceeeccc
Confidence 3444455444334456788999999999999864 22 34567889999887 222344678999999986
Q ss_pred CCEEEe
Q psy12376 70 TSKRVP 75 (89)
Q Consensus 70 ~~~~~~ 75 (89)
-+....
T Consensus 813 igr~La 818 (1034)
T KOG4190|consen 813 IGRLLA 818 (1034)
T ss_pred ccchhH
Confidence 555443
No 262
>KOG4532|consensus
Probab=97.08 E-value=0.0079 Score=40.12 Aligned_cols=64 Identities=11% Similarity=-0.036 Sum_probs=48.0
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCC-CeEeeE-ecC---Ccceeec-----cEEEEEeCCCCEEEEeCCC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMT-SKRVPV-LGK---HTNTIVG-----QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~-~~~~~~-~~~---h~~~i~~-----~~las~s~d~~v~iwd~~~ 70 (89)
..++++|+|++++++-++...|..|.+.. ++.+.. ... -.+.-.+ ..+|.+..||++.|||++.
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~ 234 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRN 234 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecc
Confidence 56899999999999999999999999864 444322 211 1122222 7899999999999999974
No 263
>KOG1912|consensus
Probab=97.01 E-value=0.0016 Score=48.56 Aligned_cols=77 Identities=13% Similarity=0.192 Sum_probs=60.6
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------------------cEEEEEeCCCCEEEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------------------QVLAIGTARGNLTVY 66 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------------------~~las~s~d~~v~iw 66 (89)
...++.|+|.| .||.|+.+ .|.+-|.++.+.+..+.-|+..|.. -+||++...|.|.+|
T Consensus 17 N~~A~Dw~~~G-LiAygshs-lV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~ 94 (1062)
T KOG1912|consen 17 NRNAADWSPSG-LIAYGSHS-LVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILV 94 (1062)
T ss_pred cccccccCccc-eEEEecCc-eEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEE
Confidence 35678999998 67777654 6777899988888877777765543 479999999999999
Q ss_pred eCCCCEEEeeeCCCCCCC
Q psy12376 67 NHMTSKRVPVLGKHTKSK 84 (89)
Q Consensus 67 d~~~~~~~~~l~~h~~~~ 84 (89)
|...+..+..+..|.+++
T Consensus 95 d~~~~s~~~~l~~~~~~~ 112 (1062)
T KOG1912|consen 95 DFVLASVINWLSHSNDSV 112 (1062)
T ss_pred EehhhhhhhhhcCCCcch
Confidence 999888877777666553
No 264
>PRK02889 tolB translocation protein TolB; Provisional
Probab=96.99 E-value=0.015 Score=40.47 Aligned_cols=78 Identities=15% Similarity=0.132 Sum_probs=44.4
Q ss_pred EEEEEccCCCEEEEEeCCC---cEEEEeCCCCeEeeEecCCc--ceeec---cEEEEEeCCC-C--EEEEeCCCCEEEee
Q psy12376 8 FLLQTSQVGQVLAIGTARG---NLTVYNHMTSKRVPVLGKHT--NTIVG---QVLAIGTARG-N--LTVYNHMTSKRVPV 76 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g---~v~iwd~~~~~~~~~~~~h~--~~i~~---~~las~s~d~-~--v~iwd~~~~~~~~~ 76 (89)
...+|||||++|+..+.++ .|.+||..+++......+.. .+-.+ ++|+.++.++ . +++-++ ++.....
T Consensus 331 ~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~ 409 (427)
T PRK02889 331 TSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDTTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQR 409 (427)
T ss_pred CceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCCCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEE
Confidence 3578999999998877655 69999998876433222211 11112 5555554433 3 555555 4555555
Q ss_pred eCCCCCCCcC
Q psy12376 77 LGKHTKSKPS 86 (89)
Q Consensus 77 l~~h~~~~~~ 86 (89)
+..+...+..
T Consensus 410 l~~~~g~~~~ 419 (427)
T PRK02889 410 LSVQGGDVRE 419 (427)
T ss_pred eecCCCCCCC
Confidence 5444444433
No 265
>KOG1064|consensus
Probab=96.95 E-value=0.00046 Score=55.07 Aligned_cols=74 Identities=14% Similarity=0.190 Sum_probs=53.2
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec-----------------------------------------
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG----------------------------------------- 43 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~----------------------------------------- 43 (89)
..++.+.|+.+|..+.++..||.+.+|.+.. +.....+
T Consensus 2252 s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p-k~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~ 2330 (2439)
T KOG1064|consen 2252 SRVTRSRFNHQGNKFGIVDGDGDLSLWQASP-KPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSL 2330 (2439)
T ss_pred chhhhhhhcccCCceeeeccCCceeecccCC-cceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccce
Confidence 4577889999999999999999999998753 1111111
Q ss_pred ---CCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeCC
Q psy12376 44 ---KHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLGK 79 (89)
Q Consensus 44 ---~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~~ 79 (89)
.|.+..++ .+|++||.+|.|.+||++..+..+..++
T Consensus 2331 v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~ 2376 (2439)
T KOG1064|consen 2331 VHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA 2376 (2439)
T ss_pred eeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh
Confidence 12222222 7899999999999999988777665543
No 266
>KOG1523|consensus
Probab=96.95 E-value=0.0039 Score=42.18 Aligned_cols=67 Identities=12% Similarity=0.078 Sum_probs=53.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeC-CCCeEee--EecCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNH-MTSKRVP--VLGKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~-~~~~~~~--~~~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
|...++++.|+|..+.|++++.|..-++|.. ..++-.. .+-.++....| +.||.||.-..|.||-.+
T Consensus 54 Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E 130 (361)
T KOG1523|consen 54 HDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYE 130 (361)
T ss_pred hCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEe
Confidence 4557999999999999999999999999998 4444322 33346666666 899999999999999885
No 267
>KOG1275|consensus
Probab=96.93 E-value=0.0018 Score=48.90 Aligned_cols=63 Identities=14% Similarity=0.220 Sum_probs=52.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeC---------CCCEEEEeCCCCEEEeee
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTA---------RGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~---------d~~v~iwd~~~~~~~~~l 77 (89)
+++++.+|...|+|.+.|.++.+.++.+..|++.|.+ ++|++||. |..|.|||++.=..+..+
T Consensus 186 Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI 262 (1118)
T KOG1275|consen 186 NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPI 262 (1118)
T ss_pred cCcEEEeecccceEEeecCCcCceeeeeeccccceeeeeccCCeEEEeecccccccccccchhhhhhhhhhhccCCc
Confidence 6689999999999999999999999999999999887 78888874 557889999865544443
No 268
>PRK04922 tolB translocation protein TolB; Provisional
Probab=96.88 E-value=0.019 Score=40.00 Aligned_cols=73 Identities=16% Similarity=0.098 Sum_probs=43.1
Q ss_pred EEEEEccCCCEEEEEeCCC---cEEEEeCCCCeEeeEecCC-c--ceeec---cEEEEEeC---CCCEEEEeCCCCEEEe
Q psy12376 8 FLLQTSQVGQVLAIGTARG---NLTVYNHMTSKRVPVLGKH-T--NTIVG---QVLAIGTA---RGNLTVYNHMTSKRVP 75 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g---~v~iwd~~~~~~~~~~~~h-~--~~i~~---~~las~s~---d~~v~iwd~~~~~~~~ 75 (89)
...+|||||++|+..+.++ .|.+||..+++.. .+... . .+..+ ++++..+. .+.|+++++..+ ...
T Consensus 339 ~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~-~~~ 416 (433)
T PRK04922 339 ARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGR-VRQ 416 (433)
T ss_pred cCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCC-ceE
Confidence 4679999999998766543 6999999877643 33321 1 11112 55555444 345888888543 344
Q ss_pred eeCCCCC
Q psy12376 76 VLGKHTK 82 (89)
Q Consensus 76 ~l~~h~~ 82 (89)
.+..+..
T Consensus 417 ~l~~~~g 423 (433)
T PRK04922 417 RLVSADG 423 (433)
T ss_pred EcccCCC
Confidence 4443333
No 269
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=96.85 E-value=0.017 Score=39.17 Aligned_cols=63 Identities=19% Similarity=0.303 Sum_probs=40.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc----eeec-cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN----TIVG-QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~----~i~~-~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
++..++.++.+|.+..+|..+|+.+........ ++.. ..+..++.|+.|+.||.++|+.+...
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 171 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTY 171 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEE
Confidence 455667777788888888877776655432111 1111 55666677888888888877765543
No 270
>PRK01029 tolB translocation protein TolB; Provisional
Probab=96.84 E-value=0.024 Score=39.62 Aligned_cols=71 Identities=15% Similarity=0.110 Sum_probs=44.7
Q ss_pred cEEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeEeeEecCCc----ceeec---cEEE-EEeC--CCCEEEEeCCCCE
Q psy12376 6 YIFLLQTSQVGQVLAIGTAR---GNLTVYNHMTSKRVPVLGKHT----NTIVG---QVLA-IGTA--RGNLTVYNHMTSK 72 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~---g~v~iwd~~~~~~~~~~~~h~----~~i~~---~~la-s~s~--d~~v~iwd~~~~~ 72 (89)
.+....|||||+.|+....+ ..|.+||..+++.. .+.... .+..+ ++|+ ++.. +..|++||+.+++
T Consensus 328 ~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~ 406 (428)
T PRK01029 328 NSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-QLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKK 406 (428)
T ss_pred CccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-EccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 45678999999998876543 36999999887653 333211 12222 4444 4333 3578899998776
Q ss_pred EEeee
Q psy12376 73 RVPVL 77 (89)
Q Consensus 73 ~~~~l 77 (89)
.....
T Consensus 407 ~~~Lt 411 (428)
T PRK01029 407 TRKIV 411 (428)
T ss_pred EEEee
Confidence 65443
No 271
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=96.79 E-value=0.0071 Score=41.20 Aligned_cols=68 Identities=13% Similarity=0.190 Sum_probs=50.8
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe-----EeeEecCCccee------------ec---------cEEEEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK-----RVPVLGKHTNTI------------VG---------QVLAIG 57 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~-----~~~~~~~h~~~i------------~~---------~~las~ 57 (89)
.+.|+++.|...|.+||+|...|.|.+|.....+ ....+++|.-.. .. ..+.-.
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 4569999999999999999999999999865432 345577775321 11 455555
Q ss_pred eCCCCEEEEeCCCC
Q psy12376 58 TARGNLTVYNHMTS 71 (89)
Q Consensus 58 s~d~~v~iwd~~~~ 71 (89)
+.|.+|.+|.+...
T Consensus 106 tNdktiKlWKiyek 119 (460)
T COG5170 106 TNDKTIKLWKIYEK 119 (460)
T ss_pred cCCceeeeeeeecc
Confidence 79999999999643
No 272
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=96.77 E-value=0.028 Score=38.42 Aligned_cols=67 Identities=15% Similarity=0.092 Sum_probs=43.3
Q ss_pred EEEEEEccCCCEEEEEeCC-C--cEEEEeCCCCeEeeEecCCcc----eeec---cEEEEEeCCC---CEEEEeCCCCEE
Q psy12376 7 IFLLQTSQVGQVLAIGTAR-G--NLTVYNHMTSKRVPVLGKHTN----TIVG---QVLAIGTARG---NLTVYNHMTSKR 73 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~-g--~v~iwd~~~~~~~~~~~~h~~----~i~~---~~las~s~d~---~v~iwd~~~~~~ 73 (89)
....+|+|||+.|+..+.. | .|.++|..+++..+ +..+.. +..+ ++++.++.++ .|.+||+.++..
T Consensus 280 ~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~-l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~ 358 (417)
T TIGR02800 280 DTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRR-LTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE 358 (417)
T ss_pred CCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe
Confidence 3467899999988776653 3 68888887765433 322211 1222 6777777765 789999977654
Q ss_pred E
Q psy12376 74 V 74 (89)
Q Consensus 74 ~ 74 (89)
.
T Consensus 359 ~ 359 (417)
T TIGR02800 359 R 359 (417)
T ss_pred E
Confidence 3
No 273
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=96.76 E-value=0.0042 Score=41.22 Aligned_cols=39 Identities=21% Similarity=0.190 Sum_probs=34.1
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL 42 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~ 42 (89)
.+.|..|..||||+.||+..-+|.|.+|++.+-+..+.+
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W 267 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSW 267 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhccc
Confidence 467999999999999999999999999999887665554
No 274
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.75 E-value=0.041 Score=42.67 Aligned_cols=67 Identities=7% Similarity=0.104 Sum_probs=49.5
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC----------------Ccceeec----cEEEEEeCCCCEEEE
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK----------------HTNTIVG----QVLAIGTARGNLTVY 66 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~----------------h~~~i~~----~~las~s~d~~v~iw 66 (89)
...++++++|..+++-+.++.|++||..++........ +...|.. +++++-+.++.|++|
T Consensus 806 P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvi 885 (1057)
T PLN02919 806 PLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYL 885 (1057)
T ss_pred CceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEE
Confidence 35899999999999999999999999988765433211 0011111 678888899999999
Q ss_pred eCCCCEE
Q psy12376 67 NHMTSKR 73 (89)
Q Consensus 67 d~~~~~~ 73 (89)
|+.++..
T Consensus 886 d~~~~~~ 892 (1057)
T PLN02919 886 DLNKGEA 892 (1057)
T ss_pred ECCCCcc
Confidence 9987754
No 275
>KOG1832|consensus
Probab=96.74 E-value=0.0027 Score=48.28 Aligned_cols=66 Identities=12% Similarity=0.176 Sum_probs=50.3
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCC-CEEEEeCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARG-NLTVYNHM 69 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~-~v~iwd~~ 69 (89)
....+|++||.+-++|+.|+-.|.|++|++.+|........|+.+|+- .+|-+++... -..+|+..
T Consensus 1101 ~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~ 1175 (1516)
T KOG1832|consen 1101 TALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDAS 1175 (1516)
T ss_pred ccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccc
Confidence 345899999999999999999999999999999876667778777654 2333333333 56678774
No 276
>PRK00178 tolB translocation protein TolB; Provisional
Probab=96.69 E-value=0.031 Score=38.69 Aligned_cols=68 Identities=16% Similarity=0.116 Sum_probs=41.0
Q ss_pred EEEEEEccCCCEEEEE-eCCC--cEEEEeCCCCeEeeEecCCcc----eeec---cEEEEEe-CCC--CEEEEeCCCCEE
Q psy12376 7 IFLLQTSQVGQVLAIG-TARG--NLTVYNHMTSKRVPVLGKHTN----TIVG---QVLAIGT-ARG--NLTVYNHMTSKR 73 (89)
Q Consensus 7 i~~~~~spdg~~la~g-~~~g--~v~iwd~~~~~~~~~~~~h~~----~i~~---~~las~s-~d~--~v~iwd~~~~~~ 73 (89)
....+|||||+.|+.. ..+| .|.+||..+++. ..+..+.. +... +.|+..+ .++ .|+++|+.+++.
T Consensus 245 ~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~ 323 (430)
T PRK00178 245 NGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQL-SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA 323 (430)
T ss_pred cCCeEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 4468999999988744 4455 688889988754 33443322 1111 4444443 333 577778876654
Q ss_pred Ee
Q psy12376 74 VP 75 (89)
Q Consensus 74 ~~ 75 (89)
..
T Consensus 324 ~~ 325 (430)
T PRK00178 324 ER 325 (430)
T ss_pred EE
Confidence 43
No 277
>KOG3914|consensus
Probab=96.67 E-value=0.002 Score=44.34 Aligned_cols=40 Identities=10% Similarity=0.190 Sum_probs=33.3
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL 42 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~ 42 (89)
+|++-|..++.-++. .|++|+.|+++++||.++|+.+.++
T Consensus 192 GH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 192 GHKEFVSTISLTDNY-LLLSGSGDKTLRLWDITSGKLLDTC 231 (390)
T ss_pred ccHhheeeeeeccCc-eeeecCCCCcEEEEecccCCccccc
Confidence 677778888888774 5899999999999999999876543
No 278
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=96.63 E-value=0.094 Score=36.11 Aligned_cols=71 Identities=18% Similarity=0.159 Sum_probs=50.0
Q ss_pred EEEEEEccCCCEEEEEe----------CCCcEEEEeCCCCeEeeEec-CCcc-ee--ec--c-EEEEE-eCCCCEEEEeC
Q psy12376 7 IFLLQTSQVGQVLAIGT----------ARGNLTVYNHMTSKRVPVLG-KHTN-TI--VG--Q-VLAIG-TARGNLTVYNH 68 (89)
Q Consensus 7 i~~~~~spdg~~la~g~----------~~g~v~iwd~~~~~~~~~~~-~h~~-~i--~~--~-~las~-s~d~~v~iwd~ 68 (89)
+.-++++|+|+.+.... ..+.|.++|..+++.+..+. ++.- .| .. + +|... ..++.|.+.|.
T Consensus 250 ~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~ 329 (352)
T TIGR02658 250 WQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDA 329 (352)
T ss_pred ceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEEC
Confidence 44599999998777632 22489999999999888765 3211 12 22 4 55544 46888999999
Q ss_pred CCCEEEeee
Q psy12376 69 MTSKRVPVL 77 (89)
Q Consensus 69 ~~~~~~~~l 77 (89)
.+++.+..+
T Consensus 330 ~t~k~i~~i 338 (352)
T TIGR02658 330 ETGKELSSV 338 (352)
T ss_pred cCCeEEeee
Confidence 999888876
No 279
>KOG1524|consensus
Probab=96.63 E-value=0.0076 Score=43.50 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=38.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG 51 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~ 51 (89)
|.+-|.++.|+|....+++|+.|-..++||.. |..+..-..|..+|++
T Consensus 185 HDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITS 232 (737)
T KOG1524|consen 185 HDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITS 232 (737)
T ss_pred cCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceee
Confidence 45568999999999999999999999999986 4444445567777765
No 280
>KOG1912|consensus
Probab=96.61 E-value=0.012 Score=44.22 Aligned_cols=74 Identities=11% Similarity=0.144 Sum_probs=57.1
Q ss_pred cCCcEEEEEEccCC------------CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----------cEEEEEeC
Q psy12376 3 LRYYIFLLQTSQVG------------QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----------QVLAIGTA 59 (89)
Q Consensus 3 ~~~~i~~~~~spdg------------~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----------~~las~s~ 59 (89)
|+..|+.+.|.|-. ..||++.-.|.|.+||...+..+..++.|.+++.. ..|+.-..
T Consensus 54 h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ 133 (1062)
T KOG1912|consen 54 HQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHG 133 (1062)
T ss_pred CccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecC
Confidence 45568899997632 25678888999999999888777777777776654 46666677
Q ss_pred CCCEEEEeCCCCEEEee
Q psy12376 60 RGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 60 d~~v~iwd~~~~~~~~~ 76 (89)
-.++.+||..+|+...+
T Consensus 134 ss~lvLwntdtG~k~Wk 150 (1062)
T KOG1912|consen 134 SSTLVLWNTDTGEKFWK 150 (1062)
T ss_pred CcEEEEEEccCCceeec
Confidence 88999999999987654
No 281
>PRK01029 tolB translocation protein TolB; Provisional
Probab=96.58 E-value=0.02 Score=40.00 Aligned_cols=70 Identities=16% Similarity=0.134 Sum_probs=40.9
Q ss_pred EEEEEEccCCCEEEEEeC-CCcEEEE--eCCC-CeEeeEecCCcc----eeec---cEEEEEeCC---CCEEEEeCCCCE
Q psy12376 7 IFLLQTSQVGQVLAIGTA-RGNLTVY--NHMT-SKRVPVLGKHTN----TIVG---QVLAIGTAR---GNLTVYNHMTSK 72 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~-~g~v~iw--d~~~-~~~~~~~~~h~~----~i~~---~~las~s~d---~~v~iwd~~~~~ 72 (89)
....+|||||+.|+..+. +|...+| +... +.....+..+.. +..+ ++|+..+.+ ..|++||+.+++
T Consensus 283 ~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~ 362 (428)
T PRK01029 283 QGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR 362 (428)
T ss_pred cCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence 356799999998887664 5654555 4432 222333433222 2222 566655443 369999998876
Q ss_pred EEee
Q psy12376 73 RVPV 76 (89)
Q Consensus 73 ~~~~ 76 (89)
....
T Consensus 363 ~~~L 366 (428)
T PRK01029 363 DYQL 366 (428)
T ss_pred eEEc
Confidence 6543
No 282
>KOG2315|consensus
Probab=96.55 E-value=0.023 Score=40.88 Aligned_cols=68 Identities=9% Similarity=0.168 Sum_probs=48.8
Q ss_pred cEEEEEEccCCCEEEEEe---CCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeC------CCCEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGT---ARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTA------RGNLTVYNHMTS 71 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~---~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~------d~~v~iwd~~~~ 71 (89)
+=..+-|+|.|++|+.++ -.|.+.+||+.+.+++..+..-...+.. .+|.+++. |+.+.||+.. |
T Consensus 313 pRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G 391 (566)
T KOG2315|consen 313 PRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-G 391 (566)
T ss_pred CccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEec-C
Confidence 345788999999887654 3689999999998877776654444333 67766654 6889999985 4
Q ss_pred EEE
Q psy12376 72 KRV 74 (89)
Q Consensus 72 ~~~ 74 (89)
..+
T Consensus 392 ~~l 394 (566)
T KOG2315|consen 392 SLL 394 (566)
T ss_pred cee
Confidence 443
No 283
>KOG2314|consensus
Probab=96.54 E-value=0.0089 Score=43.23 Aligned_cols=68 Identities=13% Similarity=0.098 Sum_probs=48.6
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc--eeec----cEEEEEeC-----------CCCEEEEeCCC
Q psy12376 8 FLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN--TIVG----QVLAIGTA-----------RGNLTVYNHMT 70 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~--~i~~----~~las~s~-----------d~~v~iwd~~~ 70 (89)
+.+.|||-|.+|++-... .|.+|-..+...++.+. |.+ .|.. +||+|=|. -..+.|||+++
T Consensus 214 tyv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~-Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~t 291 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQ-GIALWGGESFDRIQRFY-HPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIAT 291 (698)
T ss_pred eeEEecCCceEEEEEecc-ceeeecCccHHHHHhcc-CCCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccc
Confidence 679999999999997765 57889877755555542 433 2222 78887653 25789999999
Q ss_pred CEEEeee
Q psy12376 71 SKRVPVL 77 (89)
Q Consensus 71 ~~~~~~l 77 (89)
|.....+
T Consensus 292 G~lkrsF 298 (698)
T KOG2314|consen 292 GLLKRSF 298 (698)
T ss_pred cchhcce
Confidence 9876654
No 284
>KOG2041|consensus
Probab=96.52 E-value=0.0093 Score=44.55 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=52.9
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe----E-----------eeEecCCcceeec-------cEEEEEeCCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK----R-----------VPVLGKHTNTIVG-------QVLAIGTARGN 62 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~----~-----------~~~~~~h~~~i~~-------~~las~s~d~~ 62 (89)
-.+.|++|.....++|+|+.||.+++..+.+.. . ...+.+|+..|.- +.|-+...+|-
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~Gl 94 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGL 94 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCce
Confidence 358899999999999999999999998875421 1 2346788887664 67888899999
Q ss_pred EEEEeCCCCE
Q psy12376 63 LTVYNHMTSK 72 (89)
Q Consensus 63 v~iwd~~~~~ 72 (89)
|.+|=+-.+.
T Consensus 95 IiVWmlykgs 104 (1189)
T KOG2041|consen 95 IIVWMLYKGS 104 (1189)
T ss_pred EEEEeeeccc
Confidence 9998764444
No 285
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=96.45 E-value=0.062 Score=38.56 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=56.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCC-cEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARG-NLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g-~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+++..|....+.-+++-++.|+.|| .+-|+|.++++..+.. +.-+.|.+ ++++.+-....+.+.|++++..
T Consensus 357 ~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e-~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv 435 (668)
T COG4946 357 GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIE-KDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV 435 (668)
T ss_pred CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEee-CCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe
Confidence 4566688889999999999999999 9999999998754443 33344544 7788888888999999987765
No 286
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.44 E-value=0.056 Score=37.70 Aligned_cols=71 Identities=15% Similarity=0.231 Sum_probs=48.9
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEee-------------------------------------------Ee
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVP-------------------------------------------VL 42 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~-------------------------------------------~~ 42 (89)
.|+.+.|+++-.-||+|..+|.|.||.-...+... .+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 48999999998899999999999998743221110 01
Q ss_pred cCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 43 GKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 43 ~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
...+++|.+ .++|.|.++|.+.|-|++....+..
T Consensus 83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~ 122 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYN 122 (395)
T ss_dssp ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEee
Confidence 112234444 7999999999999999988777654
No 287
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=96.41 E-value=0.0054 Score=44.08 Aligned_cols=31 Identities=19% Similarity=0.392 Sum_probs=28.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTS 36 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~ 36 (89)
..+.++|+|+|..+++|+..|.+.+||+.-+
T Consensus 301 ~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 301 IPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred cceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 3678999999999999999999999998754
No 288
>KOG2066|consensus
Probab=96.39 E-value=0.027 Score=42.12 Aligned_cols=74 Identities=18% Similarity=0.235 Sum_probs=53.3
Q ss_pred CCcEEEEEEccC-----CCEEEEEeCCCcEEEEeCCC-CeEee-EecCCcceeec-----cEEEEEeCCCCEEEEeCCCC
Q psy12376 4 RYYIFLLQTSQV-----GQVLAIGTARGNLTVYNHMT-SKRVP-VLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 4 ~~~i~~~~~spd-----g~~la~g~~~g~v~iwd~~~-~~~~~-~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~ 71 (89)
.-++-+++++|| .+++++|+..| +.++..+= |.... .+....++|.+ +++|=++++| |+|||+..+
T Consensus 112 ~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~g~lIAWand~G-v~vyd~~~~ 189 (846)
T KOG2066|consen 112 KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWRGNLIAWANDDG-VKVYDTPTR 189 (846)
T ss_pred CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEecCcEEEEecCCC-cEEEecccc
Confidence 346889999999 46889999999 88876431 22222 34455677877 7888876666 999999888
Q ss_pred EEEeeeCC
Q psy12376 72 KRVPVLGK 79 (89)
Q Consensus 72 ~~~~~l~~ 79 (89)
+++..+..
T Consensus 190 ~~l~~i~~ 197 (846)
T KOG2066|consen 190 QRLTNIPP 197 (846)
T ss_pred ceeeccCC
Confidence 88776654
No 289
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=96.38 E-value=0.089 Score=37.81 Aligned_cols=71 Identities=14% Similarity=0.069 Sum_probs=52.0
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeC----CCCEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTA----RGNLTVYNHMTSKR 73 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~----d~~v~iwd~~~~~~ 73 (89)
..|.++..+|||++++.+....++.+.|+.+|.....-+..-+.|.. ..+|.+=- -..|+++|...++.
T Consensus 402 g~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Ki 481 (668)
T COG4946 402 GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKI 481 (668)
T ss_pred cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeE
Confidence 35889999999999999999999999999998753333333333433 56665533 44789999988776
Q ss_pred Ee
Q psy12376 74 VP 75 (89)
Q Consensus 74 ~~ 75 (89)
..
T Consensus 482 y~ 483 (668)
T COG4946 482 YD 483 (668)
T ss_pred EE
Confidence 54
No 290
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=96.36 E-value=0.014 Score=38.80 Aligned_cols=31 Identities=26% Similarity=0.262 Sum_probs=27.9
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSK 37 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~ 37 (89)
-..++||||+..||.+...|+|.+||....+
T Consensus 46 WRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~ 76 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAESTGTIRVFDLMGSE 76 (282)
T ss_pred heEEEECCCCcEEEEEcCCCeEEEEecccce
Confidence 5789999999999999999999999987543
No 291
>KOG4497|consensus
Probab=96.34 E-value=0.031 Score=38.35 Aligned_cols=71 Identities=10% Similarity=0.029 Sum_probs=52.9
Q ss_pred CcEEEEEEccCCCEEEEE-eCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 5 YYIFLLQTSQVGQVLAIG-TARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g-~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+.|..+.|..|..+++++ ..++.|.+|++..-+....+.....++.+ .+|-+.+-|-.|.+|.+.+.+...
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~ 128 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL 128 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE
Confidence 457789999999877655 55889999999876655555544444433 678888999999999998766544
No 292
>KOG2315|consensus
Probab=96.33 E-value=0.054 Score=39.07 Aligned_cols=73 Identities=18% Similarity=0.188 Sum_probs=50.5
Q ss_pred CCcEEEEEEccCCCEEE--EEeCCCcEEEEeCCCCeEeeEec-CCcceeec----cEEEEEeCC---CCEEEEeCCCCEE
Q psy12376 4 RYYIFLLQTSQVGQVLA--IGTARGNLTVYNHMTSKRVPVLG-KHTNTIVG----QVLAIGTAR---GNLTVYNHMTSKR 73 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la--~g~~~g~v~iwd~~~~~~~~~~~-~h~~~i~~----~~las~s~d---~~v~iwd~~~~~~ 73 (89)
.++|.++.|+|+|.-|+ .|-.-..+.|||.+. +.+..+. +-...+.. ++|+.||-+ |.|.|||+.+.++
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-~~v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~ 348 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-KPVFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKL 348 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecccceEEEEcCCC-CEeEeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhh
Confidence 46899999999997554 555677999999874 5555553 22222322 677766654 6999999987666
Q ss_pred Eeee
Q psy12376 74 VPVL 77 (89)
Q Consensus 74 ~~~l 77 (89)
+..+
T Consensus 349 i~~~ 352 (566)
T KOG2315|consen 349 IAKF 352 (566)
T ss_pred cccc
Confidence 6544
No 293
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.33 E-value=0.079 Score=33.28 Aligned_cols=65 Identities=23% Similarity=0.248 Sum_probs=46.8
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEe-cCCcc------e--ee--ccEEEEEeCCCCEEEEeCCCCEEEeeeCC
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVL-GKHTN------T--IV--GQVLAIGTARGNLTVYNHMTSKRVPVLGK 79 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~-~~h~~------~--i~--~~~las~s~d~~v~iwd~~~~~~~~~l~~ 79 (89)
++..++.++.++.+..+|..+|+.+... ..... . .. .+.++.+..++.|..+|+++|+.+.....
T Consensus 75 ~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~ 150 (238)
T PF13360_consen 75 DGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPV 150 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEES
T ss_pred cccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeec
Confidence 4556677778889999999999988773 32211 0 00 16788888899999999999998766543
No 294
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.31 E-value=0.097 Score=40.71 Aligned_cols=71 Identities=8% Similarity=0.060 Sum_probs=48.0
Q ss_pred EEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEe-------------cC-----------Ccceeec----cEEEEE
Q psy12376 7 IFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVL-------------GK-----------HTNTIVG----QVLAIG 57 (89)
Q Consensus 7 i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~-------------~~-----------h~~~i~~----~~las~ 57 (89)
...++|+|+|. .+++.+.++.|++||..++...... .. |...+.. +++++-
T Consensus 742 P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVAD 821 (1057)
T PLN02919 742 PSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVAD 821 (1057)
T ss_pred ccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEE
Confidence 46799999998 4556666889999999876532111 00 1111111 678888
Q ss_pred eCCCCEEEEeCCCCEEEeee
Q psy12376 58 TARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 58 s~d~~v~iwd~~~~~~~~~l 77 (89)
+.++.|++||..++......
T Consensus 822 s~N~rIrviD~~tg~v~tia 841 (1057)
T PLN02919 822 SYNHKIKKLDPATKRVTTLA 841 (1057)
T ss_pred CCCCEEEEEECCCCeEEEEe
Confidence 89999999999887766543
No 295
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.24 E-value=0.041 Score=26.55 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=25.4
Q ss_pred cEEEEEEccC-C--CEEEEEeCCCcEEEEeCCC
Q psy12376 6 YIFLLQTSQV-G--QVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 6 ~i~~~~~spd-g--~~la~g~~~g~v~iwd~~~ 35 (89)
.+.++.|||+ + .+||..=..|.|.|+|+++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 5889999984 4 5888888899999999995
No 296
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=96.23 E-value=0.048 Score=37.56 Aligned_cols=60 Identities=18% Similarity=0.257 Sum_probs=44.9
Q ss_pred EEEEEeCCCcEEEEeCCCCeEeeEecCCcc----eeec---cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 18 VLAIGTARGNLTVYNHMTSKRVPVLGKHTN----TIVG---QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 18 ~la~g~~~g~v~iwd~~~~~~~~~~~~h~~----~i~~---~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
++++-..+|.|.+.|..+.+.+..+..... ...+ +++..++.|+.|.++|+.+++.+..+
T Consensus 8 ~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i 74 (369)
T PF02239_consen 8 FYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATI 74 (369)
T ss_dssp EEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEE
T ss_pred EEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEE
Confidence 446667799999999999988888764322 2222 67777889999999999998887765
No 297
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=96.20 E-value=0.1 Score=35.89 Aligned_cols=66 Identities=11% Similarity=0.096 Sum_probs=45.9
Q ss_pred EccCCCEEEEEeC----------CCcEEEEeCCCCeEeeEecCCcc------------eeec--cEEEEEe-C-CCCEEE
Q psy12376 12 TSQVGQVLAIGTA----------RGNLTVYNHMTSKRVPVLGKHTN------------TIVG--QVLAIGT-A-RGNLTV 65 (89)
Q Consensus 12 ~spdg~~la~g~~----------~g~v~iwd~~~~~~~~~~~~h~~------------~i~~--~~las~s-~-d~~v~i 65 (89)
+||||+.|.++.. +..|.+||..+++.+..+.--.+ .+.. ++|.... . +..|.+
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V 132 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV 132 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence 9999998766655 77999999999998877652111 1111 4444332 3 788888
Q ss_pred EeCCCCEEEeee
Q psy12376 66 YNHMTSKRVPVL 77 (89)
Q Consensus 66 wd~~~~~~~~~l 77 (89)
.|+.+++.+..+
T Consensus 133 vD~~~~kvv~ei 144 (352)
T TIGR02658 133 VDLEGKAFVRMM 144 (352)
T ss_pred EECCCCcEEEEE
Confidence 888888777654
No 298
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=96.19 E-value=0.076 Score=36.46 Aligned_cols=62 Identities=13% Similarity=0.112 Sum_probs=39.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEeeEecC-----Ccceeec-cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 16 GQVLAIGTARGNLTVYNHMTSKRVPVLGK-----HTNTIVG-QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 16 g~~la~g~~~g~v~iwd~~~~~~~~~~~~-----h~~~i~~-~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+..+..++.+|.+..+|..+|+.+..... ...++.. .++..++.||.|++.|..+|+.+...
T Consensus 294 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~~g~l~v~~~~G~l~~ld~~tG~~~~~~ 361 (394)
T PRK11138 294 GGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLYNGYLVVGDSEGYLHWINREDGRFVAQQ 361 (394)
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEECCEEEEEeCCCEEEEEECCCCCEEEEE
Confidence 44566666777777777777765543221 1122222 67777888888888888888766543
No 299
>PRK04792 tolB translocation protein TolB; Provisional
Probab=96.17 E-value=0.093 Score=36.91 Aligned_cols=68 Identities=18% Similarity=0.110 Sum_probs=40.1
Q ss_pred EEEEEEccCCCEEEE-EeCCCc--EEEEeCCCCeEeeEecCCcc----eeec---cEEEE-EeCCC--CEEEEeCCCCEE
Q psy12376 7 IFLLQTSQVGQVLAI-GTARGN--LTVYNHMTSKRVPVLGKHTN----TIVG---QVLAI-GTARG--NLTVYNHMTSKR 73 (89)
Q Consensus 7 i~~~~~spdg~~la~-g~~~g~--v~iwd~~~~~~~~~~~~h~~----~i~~---~~las-~s~d~--~v~iwd~~~~~~ 73 (89)
....+|||||+.|+. .+.+|. |.++|..+++. ..+..+.. +... +.|+. ...++ .|+++|+.+++.
T Consensus 264 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~ 342 (448)
T PRK04792 264 NGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV 342 (448)
T ss_pred cCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 346799999998875 455664 88888887754 33433322 1111 44444 43344 466667776654
Q ss_pred Ee
Q psy12376 74 VP 75 (89)
Q Consensus 74 ~~ 75 (89)
..
T Consensus 343 ~~ 344 (448)
T PRK04792 343 SR 344 (448)
T ss_pred EE
Confidence 43
No 300
>KOG4497|consensus
Probab=96.10 E-value=0.0074 Score=41.30 Aligned_cols=74 Identities=11% Similarity=0.081 Sum_probs=49.9
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec---C--Ccce-eec-cEEEEEeCCCCEEEEeCCCCEEEeeeCCCC
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG---K--HTNT-IVG-QVLAIGTARGNLTVYNHMTSKRVPVLGKHT 81 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~---~--h~~~-i~~-~~las~s~d~~v~iwd~~~~~~~~~l~~h~ 81 (89)
.+.|||+|+++|+.+.. .+.|.|..+-+....+. . |-.. ... -+|.....|+.|.+|++...+-...+..-+
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~ 91 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQ 91 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCC
Confidence 57899999999998766 88888888765422211 0 1000 001 466777899999999998877777665444
Q ss_pred CC
Q psy12376 82 KS 83 (89)
Q Consensus 82 ~~ 83 (89)
..
T Consensus 92 ag 93 (447)
T KOG4497|consen 92 AG 93 (447)
T ss_pred Cc
Confidence 43
No 301
>KOG1409|consensus
Probab=95.99 E-value=0.14 Score=35.33 Aligned_cols=47 Identities=13% Similarity=0.201 Sum_probs=37.0
Q ss_pred eeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC-EEEeeeCCCCCCCc
Q psy12376 39 VPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS-KRVPVLGKHTKSKP 85 (89)
Q Consensus 39 ~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~-~~~~~l~~h~~~~~ 85 (89)
+..+.+|.+.+.+ ..+.+|..|..+.+||+..+ .....+.+|.+++.
T Consensus 190 i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~ 244 (404)
T KOG1409|consen 190 ITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQ 244 (404)
T ss_pred EEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhh
Confidence 5556778888877 79999999999999999643 45567788887764
No 302
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=95.97 E-value=0.067 Score=36.73 Aligned_cols=63 Identities=16% Similarity=0.176 Sum_probs=47.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEeeEecCCc----ceeec-cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 16 GQVLAIGTARGNLTVYNHMTSKRVPVLGKHT----NTIVG-QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 16 g~~la~g~~~g~v~iwd~~~~~~~~~~~~h~----~~i~~-~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
+..+..++.+|.+..+|..+|+.+....... .++.. ..+..+..++.|+.+|.++|+..-...
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 187 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVN 187 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeec
Confidence 4567778889999999999999877654322 22222 667778889999999999998876553
No 303
>KOG2314|consensus
Probab=95.86 E-value=0.093 Score=38.23 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=44.7
Q ss_pred EEEEEEccCCCEEEEEeC-----------CCcEEEEeCCCCeEeeEecCCcc-----eeec-----cEEEEEeCCCCEEE
Q psy12376 7 IFLLQTSQVGQVLAIGTA-----------RGNLTVYNHMTSKRVPVLGKHTN-----TIVG-----QVLAIGTARGNLTV 65 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~-----------~g~v~iwd~~~~~~~~~~~~h~~-----~i~~-----~~las~s~d~~v~i 65 (89)
+..+.|||.-++|++=+. ...++|||+++|...+.+..-.. ++.- +|+|.-.. .+|.|
T Consensus 252 Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisI 330 (698)
T KOG2314|consen 252 VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISI 330 (698)
T ss_pred ceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEE
Confidence 789999999999987532 25899999999988776654211 2211 67776555 56889
Q ss_pred EeCCC
Q psy12376 66 YNHMT 70 (89)
Q Consensus 66 wd~~~ 70 (89)
|+...
T Consensus 331 yEtps 335 (698)
T KOG2314|consen 331 YETPS 335 (698)
T ss_pred EecCc
Confidence 88744
No 304
>KOG2139|consensus
Probab=95.86 E-value=0.064 Score=37.20 Aligned_cols=29 Identities=24% Similarity=0.202 Sum_probs=26.0
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNH 33 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~ 33 (89)
..++-+.|||||.+|.+++-|+..++|+-
T Consensus 239 gg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 239 GGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred CceeeEEEcCCCCEEEEecccceeeeehh
Confidence 35789999999999999999999999954
No 305
>KOG4714|consensus
Probab=95.85 E-value=0.028 Score=37.42 Aligned_cols=33 Identities=15% Similarity=0.102 Sum_probs=29.2
Q ss_pred cCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCC
Q psy12376 3 LRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 3 ~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~ 35 (89)
|+.+++-+-|+| +++.|.+++.||.+-.||..+
T Consensus 222 hk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 222 HKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred hhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 566789999999 678999999999999999874
No 306
>KOG4649|consensus
Probab=95.85 E-value=0.062 Score=35.98 Aligned_cols=63 Identities=17% Similarity=0.142 Sum_probs=48.3
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCc---c-eeec---cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHT---N-TIVG---QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~---~-~i~~---~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
-|.+++.|+.+|.+++.+..+|.++..++.-. - +..+ .++-.|+.|++++.-|.++...+-+.
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyks 131 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKS 131 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEec
Confidence 47889999999999999999997776654321 1 1222 78999999999999999877666543
No 307
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=95.72 E-value=0.18 Score=35.22 Aligned_cols=65 Identities=22% Similarity=0.332 Sum_probs=46.8
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe--cC-----C-cceeec---------------cEEEEEeCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL--GK-----H-TNTIVG---------------QVLAIGTAR 60 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~--~~-----h-~~~i~~---------------~~las~s~d 60 (89)
+++|++++.|.-| |+|+|..+|.+.|.|+|.-..+..- .. . ...+.+ -.+..|.+.
T Consensus 86 ~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~ 164 (395)
T PF08596_consen 86 QGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNS 164 (395)
T ss_dssp S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETT
T ss_pred CCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCC
Confidence 5789999998776 9999999999999999987665431 11 1 111222 578888899
Q ss_pred CCEEEEeCC
Q psy12376 61 GNLTVYNHM 69 (89)
Q Consensus 61 ~~v~iwd~~ 69 (89)
|.+.+|.+.
T Consensus 165 G~v~~fkIl 173 (395)
T PF08596_consen 165 GNVLTFKIL 173 (395)
T ss_dssp SEEEEEEEE
T ss_pred CCEEEEEEe
Confidence 999999874
No 308
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=95.64 E-value=0.057 Score=40.77 Aligned_cols=62 Identities=18% Similarity=0.392 Sum_probs=44.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~ 68 (89)
.++|++-+.+| +||+|+.+|.|++||.-..+....+.+-..+|.. ..-+-|..+..|.+.+.
T Consensus 579 ~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t 646 (794)
T PF08553_consen 579 NFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDT 646 (794)
T ss_pred CceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEE
Confidence 47888888888 8899999999999995433333455666677765 23333456777888886
No 309
>KOG0882|consensus
Probab=95.54 E-value=0.034 Score=39.48 Aligned_cols=76 Identities=24% Similarity=0.243 Sum_probs=57.0
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--------------------------------Ccce----
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--------------------------------HTNT---- 48 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--------------------------------h~~~---- 48 (89)
...+++.|+|+|..++.-..|-.|++++..+|+.++.+.. |...
T Consensus 202 t~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~ 281 (558)
T KOG0882|consen 202 TEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTN 281 (558)
T ss_pred cCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccce
Confidence 4578999999999999999999999999999987543211 1110
Q ss_pred -eec---cEEEEEeCCCCEEEEeCCCCEEEeeeCCCC
Q psy12376 49 -IVG---QVLAIGTARGNLTVYNHMTSKRVPVLGKHT 81 (89)
Q Consensus 49 -i~~---~~las~s~d~~v~iwd~~~~~~~~~l~~h~ 81 (89)
+-+ ++|..|+-=| |.+.|+.++.+...+++-.
T Consensus 282 ~~fdes~~flly~t~~g-ikvin~~tn~v~ri~gk~e 317 (558)
T KOG0882|consen 282 AVFDESGNFLLYGTILG-IKVINLDTNTVVRILGKDE 317 (558)
T ss_pred eEEcCCCCEEEeeccee-EEEEEeecCeEEEEeccch
Confidence 000 6777776665 8899999999988887644
No 310
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.53 E-value=0.084 Score=38.91 Aligned_cols=66 Identities=11% Similarity=-0.020 Sum_probs=46.7
Q ss_pred CcEEEEEEccCCCEEEEEeC-CCcEEEEeCCCCeE------------eeEecCCcceeec------cEEEEEeCCCCEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTA-RGNLTVYNHMTSKR------------VPVLGKHTNTIVG------QVLAIGTARGNLTV 65 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~-~g~v~iwd~~~~~~------------~~~~~~h~~~i~~------~~las~s~d~~v~i 65 (89)
.....+++||||++++++.. +.++.|.|....+. +.+..--.+++.. +.+.|--.|..|..
T Consensus 321 KsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~k 400 (635)
T PRK02888 321 KNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVK 400 (635)
T ss_pred CCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEE
Confidence 44678999999998876665 88999999987542 2333222333332 56777778889999
Q ss_pred EeCCC
Q psy12376 66 YNHMT 70 (89)
Q Consensus 66 wd~~~ 70 (89)
||+..
T Consensus 401 wn~~~ 405 (635)
T PRK02888 401 WNIEA 405 (635)
T ss_pred EehHH
Confidence 99875
No 311
>KOG2114|consensus
Probab=95.48 E-value=0.061 Score=40.69 Aligned_cols=58 Identities=16% Similarity=0.142 Sum_probs=44.6
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcce-eec-------cEEEEEeCCCC-----EEEEeCC
Q psy12376 11 QTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNT-IVG-------QVLAIGTARGN-----LTVYNHM 69 (89)
Q Consensus 11 ~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~-i~~-------~~las~s~d~~-----v~iwd~~ 69 (89)
.|++.+..+|.|+.+|.|.+.+-+ -+.++.++.+... +.. ++|++-++|.. |+|||++
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~le 100 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLE 100 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEeccc
Confidence 578899999999999999998753 4455777776655 332 58888877765 8999995
No 312
>KOG0309|consensus
Probab=95.37 E-value=0.045 Score=41.16 Aligned_cols=84 Identities=15% Similarity=0.085 Sum_probs=56.9
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCe-EeeEec-CCcc--eee--c---cEEEEEeCCCCEEEEeCC-C
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSK-RVPVLG-KHTN--TIV--G---QVLAIGTARGNLTVYNHM-T 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~-~~~~~~-~h~~--~i~--~---~~las~s~d~~v~iwd~~-~ 70 (89)
+|...++.+.|.|.- ..+|+.+.|-.+..||+++-. .+..+. -|+. .|. . ..+|+ +..+.|.+||.+ .
T Consensus 112 ghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlas-shg~~i~vwd~r~g 190 (1081)
T KOG0309|consen 112 GHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLAS-SHGNDIFVWDLRKG 190 (1081)
T ss_pred cCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhh-ccCCceEEEeccCC
Confidence 456679999999965 488999999999999998733 222211 1221 111 1 34444 677789999997 4
Q ss_pred CEEEeeeCCCCCCCcC
Q psy12376 71 SKRVPVLGKHTKSKPS 86 (89)
Q Consensus 71 ~~~~~~l~~h~~~~~~ 86 (89)
+.....+.+|..++++
T Consensus 191 s~pl~s~K~~vs~vn~ 206 (1081)
T KOG0309|consen 191 STPLCSLKGHVSSVNS 206 (1081)
T ss_pred CcceEEecccceeeeh
Confidence 5677778888777664
No 313
>KOG2066|consensus
Probab=95.30 E-value=0.096 Score=39.38 Aligned_cols=17 Identities=29% Similarity=0.532 Sum_probs=8.5
Q ss_pred CEEEEEeCCCcEEEEeC
Q psy12376 17 QVLAIGTARGNLTVYNH 33 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~ 33 (89)
++|+.|+-+|.|++++.
T Consensus 50 ~~~~~GtH~g~v~~~~~ 66 (846)
T KOG2066|consen 50 KFFALGTHRGAVYLTTC 66 (846)
T ss_pred ceeeeccccceEEEEec
Confidence 45555555555555544
No 314
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=95.21 E-value=0.11 Score=23.80 Aligned_cols=27 Identities=15% Similarity=0.059 Sum_probs=17.9
Q ss_pred CcEEEEEEccCCCEEEEEeC-C--CcEEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTA-R--GNLTVY 31 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~-~--g~v~iw 31 (89)
..-....|||||+.|+-.+. + |...||
T Consensus 9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34678899999998876554 3 555554
No 315
>KOG3617|consensus
Probab=95.13 E-value=0.016 Score=44.12 Aligned_cols=64 Identities=23% Similarity=0.157 Sum_probs=55.3
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
.+++++|+|..-.||.|..-|.+.+|...+.+.-.....|..+|.- +.+.++..-|.|.+|...
T Consensus 61 hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 61 HATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 3678999999889999999999999999887766666678877654 789999999999999986
No 316
>KOG4190|consensus
Probab=95.12 E-value=0.025 Score=41.35 Aligned_cols=67 Identities=15% Similarity=0.218 Sum_probs=52.6
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceee---c---cEEEEEeCCCCEEE-EeCCCCE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIV---G---QVLAIGTARGNLTV-YNHMTSK 72 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~---~---~~las~s~d~~v~i-wd~~~~~ 72 (89)
-+.+++..|.|+.+|++-.+|.+.+.|.++|+.+..+.+..--+. + +.++....|.++.+ |-..++.
T Consensus 878 ~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldgi 951 (1034)
T KOG4190|consen 878 LTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDGI 951 (1034)
T ss_pred heeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCCe
Confidence 377999999999999999999999999999998887754321110 1 67888888999999 8776554
No 317
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.02 E-value=0.54 Score=30.20 Aligned_cols=64 Identities=22% Similarity=0.164 Sum_probs=40.3
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCeEeeE-------ec-------CCcceee-c-----cEEEEEeCCCCEEEEeCCCC
Q psy12376 12 TSQVGQVLAIGTARGNLTVYNHMTSKRVPV-------LG-------KHTNTIV-G-----QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 12 ~spdg~~la~g~~~g~v~iwd~~~~~~~~~-------~~-------~h~~~i~-~-----~~las~s~d~~v~iwd~~~~ 71 (89)
+..++++|++-+.+|.+++||+.+++.+.. +. .....|. + ...+..-.+|..+.||..-+
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~L~ 97 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPDLG 97 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccccc
Confidence 446788999999999999999998876322 11 1122222 2 22222334678899988655
Q ss_pred EEEe
Q psy12376 72 KRVP 75 (89)
Q Consensus 72 ~~~~ 75 (89)
.-+.
T Consensus 98 ~W~~ 101 (219)
T PF07569_consen 98 CWIR 101 (219)
T ss_pred eeEE
Confidence 4444
No 318
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.02 E-value=0.14 Score=39.37 Aligned_cols=37 Identities=22% Similarity=0.156 Sum_probs=30.7
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV 41 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~ 41 (89)
...|.+++||||++.||..+.+|++.+.. ++.+.+.+
T Consensus 120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt-~~fd~i~E 156 (928)
T PF04762_consen 120 DSGILAASWSPDEELLALVTGEGNLLLMT-RDFDPISE 156 (928)
T ss_pred cCcEEEEEECCCcCEEEEEeCCCEEEEEe-ccceEEEE
Confidence 34699999999999999999999999985 55665544
No 319
>PRK04043 tolB translocation protein TolB; Provisional
Probab=94.90 E-value=0.87 Score=31.98 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=41.1
Q ss_pred cEEEEEEccCCCE-EEEEeC---CCcEEEEeCCCCeEeeEec--CCcc-eeec----cEEEEEeCC--CCEEEEeCCCCE
Q psy12376 6 YIFLLQTSQVGQV-LAIGTA---RGNLTVYNHMTSKRVPVLG--KHTN-TIVG----QVLAIGTAR--GNLTVYNHMTSK 72 (89)
Q Consensus 6 ~i~~~~~spdg~~-la~g~~---~g~v~iwd~~~~~~~~~~~--~h~~-~i~~----~~las~s~d--~~v~iwd~~~~~ 72 (89)
....-.|||||+. ++..+. +..|.++|..+|+...... +... +-.+ .++++.+.+ ..|+++|+.++.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~ 268 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT 268 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc
Confidence 4567899999985 654433 3579999998876533222 2111 1111 344444434 567778887776
Q ss_pred EEe
Q psy12376 73 RVP 75 (89)
Q Consensus 73 ~~~ 75 (89)
..+
T Consensus 269 ~~~ 271 (419)
T PRK04043 269 LTQ 271 (419)
T ss_pred EEE
Confidence 443
No 320
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=94.87 E-value=0.13 Score=36.95 Aligned_cols=73 Identities=12% Similarity=0.102 Sum_probs=48.8
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc--eeec----cEEEEEeCCC---------------CEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN--TIVG----QVLAIGTARG---------------NLT 64 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~--~i~~----~~las~s~d~---------------~v~ 64 (89)
++..++|||.|.+|++.... .|.+|+...+..+..+. |.. .+.. +||++=+... .+.
T Consensus 34 p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~-~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~ 111 (561)
T COG5354 34 PVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFR-HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVF 111 (561)
T ss_pred chhheeecCcchheehhhcc-ceEEccccchhheeeee-cCCceecccCcccceeeeeccCCccChhhccCCccccCcee
Confidence 57789999999999987655 68889887655444332 211 1111 5565544333 599
Q ss_pred EEeCCCCEEEeeeCCC
Q psy12376 65 VYNHMTSKRVPVLGKH 80 (89)
Q Consensus 65 iwd~~~~~~~~~l~~h 80 (89)
+||+.++..+.....-
T Consensus 112 vwd~~sg~iv~sf~~~ 127 (561)
T COG5354 112 VWDIASGMIVFSFNGI 127 (561)
T ss_pred EEeccCceeEeecccc
Confidence 9999999988766543
No 321
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=94.66 E-value=0.25 Score=35.44 Aligned_cols=64 Identities=9% Similarity=0.094 Sum_probs=40.3
Q ss_pred cCCCEEEEEeCCCcEEEEeCCC----CeEeeEe--cCC--------------------cceee-----c------cEEEE
Q psy12376 14 QVGQVLAIGTARGNLTVYNHMT----SKRVPVL--GKH--------------------TNTIV-----G------QVLAI 56 (89)
Q Consensus 14 pdg~~la~g~~~g~v~iwd~~~----~~~~~~~--~~h--------------------~~~i~-----~------~~las 56 (89)
++...|+++..||.+....... +...... ..+ ..... + .++++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 4667899999999998888653 2221110 000 01111 1 78999
Q ss_pred EeCCCCEEEEeCCCCEEEeee
Q psy12376 57 GTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 57 ~s~d~~v~iwd~~~~~~~~~l 77 (89)
-+.|+.+++||+.+++++...
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEe
Confidence 999999999999999886543
No 322
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=94.63 E-value=0.89 Score=30.81 Aligned_cols=71 Identities=17% Similarity=0.194 Sum_probs=43.2
Q ss_pred cEEEEEEccCCCEEEEEe-CCCcEEEEeCC--CCeE--eeEecCCcc---eeec----cEEE-EEeCCCCEEEEeC--CC
Q psy12376 6 YIFLLQTSQVGQVLAIGT-ARGNLTVYNHM--TSKR--VPVLGKHTN---TIVG----QVLA-IGTARGNLTVYNH--MT 70 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~-~~g~v~iwd~~--~~~~--~~~~~~h~~---~i~~----~~la-s~s~d~~v~iwd~--~~ 70 (89)
....+.+||||++|.++. ....|.+|++. +|+. +..+..... .+.. ++|+ +.-.++.|.+|++ ++
T Consensus 246 ~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~t 325 (345)
T PF10282_consen 246 APAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDT 325 (345)
T ss_dssp SEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCC
Confidence 467899999999887665 46689999983 3432 222221111 1111 5544 5557779999977 46
Q ss_pred CEEEee
Q psy12376 71 SKRVPV 76 (89)
Q Consensus 71 ~~~~~~ 76 (89)
|.....
T Consensus 326 G~l~~~ 331 (345)
T PF10282_consen 326 GKLTPV 331 (345)
T ss_dssp TEEEEE
T ss_pred CcEEEe
Confidence 665543
No 323
>KOG3621|consensus
Probab=94.35 E-value=0.077 Score=39.32 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=29.5
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~ 35 (89)
|+..|++++|++|+..+.+|...|+|.+-...+
T Consensus 123 ~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 123 HKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred CCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 567899999999999999999999998877655
No 324
>KOG2444|consensus
Probab=94.29 E-value=0.17 Score=32.94 Aligned_cols=66 Identities=20% Similarity=0.296 Sum_probs=45.8
Q ss_pred CCEEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEEEeeeCCCC
Q psy12376 16 GQVLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKRVPVLGKHT 81 (89)
Q Consensus 16 g~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~~~~l~~h~ 81 (89)
+..+++|+.+|.|.+|+... |.....+..-...|.+ .+..++..|+.|+.|++.-++.+-..+.|.
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~ 144 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHN 144 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeecccc
Confidence 35789999999999998762 1111111111122222 488888999999999999888888888887
No 325
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=94.16 E-value=0.81 Score=33.10 Aligned_cols=53 Identities=17% Similarity=0.251 Sum_probs=39.2
Q ss_pred CCcEEEEeCCCCeEeeEecC----Ccceeec--cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 25 RGNLTVYNHMTSKRVPVLGK----HTNTIVG--QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 25 ~g~v~iwd~~~~~~~~~~~~----h~~~i~~--~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.|.+.-+|+.+|+.+...+. ..+.+.. .+++.++.||.++.+|.++|+.+-..
T Consensus 440 ~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~ 498 (527)
T TIGR03075 440 MGSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKF 498 (527)
T ss_pred ceeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEE
Confidence 35788899999988776542 1233332 67777888999999999999887654
No 326
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.02 E-value=0.6 Score=35.13 Aligned_cols=66 Identities=17% Similarity=0.239 Sum_probs=42.5
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCC-C--------eE---eeEec--------CCcceeec----------cEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMT-S--------KR---VPVLG--------KHTNTIVG----------QVL 54 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~-~--------~~---~~~~~--------~h~~~i~~----------~~l 54 (89)
..|..+..+|+|.++|..+..|.+.+.=.+. | +. ++.+. .....|.. ..|
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 3688999999999999988877655544332 1 11 11111 11112211 677
Q ss_pred EEEeCCCCEEEEeCCC
Q psy12376 55 AIGTARGNLTVYNHMT 70 (89)
Q Consensus 55 as~s~d~~v~iwd~~~ 70 (89)
+.=..|+++++||+..
T Consensus 165 ~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 165 VVLTSDNTLRLYDISD 180 (717)
T ss_pred EEEecCCEEEEEecCC
Confidence 7788999999999964
No 327
>KOG2395|consensus
Probab=93.88 E-value=0.25 Score=35.95 Aligned_cols=62 Identities=11% Similarity=0.284 Sum_probs=43.1
Q ss_pred EEEEEEccCCCE-------EEEEeCCCcEEEEeCCC-Ce-EeeEecCCcc----eeec------cEEEEEeCCCCEEEEe
Q psy12376 7 IFLLQTSQVGQV-------LAIGTARGNLTVYNHMT-SK-RVPVLGKHTN----TIVG------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 7 i~~~~~spdg~~-------la~g~~~g~v~iwd~~~-~~-~~~~~~~h~~----~i~~------~~las~s~d~~v~iwd 67 (89)
|.-+.+.|+.++ -+.|-.+..|+-||+|- ++ .+...++|+. ...| .++|.||.+|.|++||
T Consensus 378 i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYd 457 (644)
T KOG2395|consen 378 INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYD 457 (644)
T ss_pred cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccceeeecCCceEEEeecCCcEEeeh
Confidence 566677776542 25778899999999984 33 3333344432 2233 8999999999999999
Q ss_pred C
Q psy12376 68 H 68 (89)
Q Consensus 68 ~ 68 (89)
-
T Consensus 458 r 458 (644)
T KOG2395|consen 458 R 458 (644)
T ss_pred h
Confidence 7
No 328
>KOG3617|consensus
Probab=93.71 E-value=0.11 Score=39.76 Aligned_cols=33 Identities=21% Similarity=0.087 Sum_probs=30.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHM 34 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~ 34 (89)
.|+.+|..+.|||+|..++++..-|.+.+|...
T Consensus 99 th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 99 THPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 578889999999999999999999999999865
No 329
>KOG2444|consensus
Probab=93.68 E-value=0.13 Score=33.43 Aligned_cols=56 Identities=20% Similarity=0.261 Sum_probs=39.9
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc-ee----e--c-cEEEEE--eCCCCEEEEeCCC
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN-TI----V--G-QVLAIG--TARGNLTVYNHMT 70 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~-~i----~--~-~~las~--s~d~~v~iwd~~~ 70 (89)
++.+..++..+|.++.|++.-++.+.....|+. +. . + .+++++ |.|..+..||++.
T Consensus 113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 455788999999999999988887776666662 21 1 1 566666 6777777777753
No 330
>KOG0309|consensus
Probab=93.66 E-value=0.11 Score=39.10 Aligned_cols=63 Identities=6% Similarity=0.106 Sum_probs=46.2
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCC-eEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTS-KRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~-~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~ 69 (89)
-+-+.|+.-...+.+.+....|.+||.+.| ..+..+.+|...+.. ..+-+++.|++|.+||-.
T Consensus 161 asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~ 232 (1081)
T KOG0309|consen 161 ASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYS 232 (1081)
T ss_pred CceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccc
Confidence 356788864344444455668999999865 455667778776665 678889999999999985
No 331
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=93.62 E-value=0.28 Score=21.37 Aligned_cols=24 Identities=17% Similarity=0.264 Sum_probs=18.5
Q ss_pred EEEEEeCCCcEEEEeCCCCeEeeE
Q psy12376 18 VLAIGTARGNLTVYNHMTSKRVPV 41 (89)
Q Consensus 18 ~la~g~~~g~v~iwd~~~~~~~~~ 41 (89)
.+.+++.+|.+..+|..+|+.+..
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~ 31 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWT 31 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEE
Confidence 566777888888888888876554
No 332
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=93.49 E-value=1.8 Score=30.29 Aligned_cols=38 Identities=26% Similarity=0.219 Sum_probs=31.3
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL 42 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~ 42 (89)
.++..++.||+|+++|.-+.+|.+.+.+..-.+.+..+
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~ 254 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEF 254 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEe
Confidence 46999999999999999999999999887655544444
No 333
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=93.46 E-value=0.84 Score=30.98 Aligned_cols=40 Identities=20% Similarity=0.392 Sum_probs=31.6
Q ss_pred cCCcEEEEEEccCCCEEEEEeC-CCcEEEEeCCCCeEeeEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTA-RGNLTVYNHMTSKRVPVL 42 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~-~g~v~iwd~~~~~~~~~~ 42 (89)
+...+-+|+++++|..+|+.+- .|.+.+||..+|+.+...
T Consensus 215 l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~ 255 (305)
T PF07433_consen 215 LNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSV 255 (305)
T ss_pred hCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecc
Confidence 3456889999999988866655 569999999999876644
No 334
>KOG1916|consensus
Probab=93.35 E-value=0.26 Score=38.08 Aligned_cols=64 Identities=16% Similarity=0.142 Sum_probs=44.8
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCC-CCeE----eeEecCCc-ceeec----------------cEEEEE-eCCCCEEEEe
Q psy12376 11 QTSQVGQVLAIGTARGNLTVYNHM-TSKR----VPVLGKHT-NTIVG----------------QVLAIG-TARGNLTVYN 67 (89)
Q Consensus 11 ~~spdg~~la~g~~~g~v~iwd~~-~~~~----~~~~~~h~-~~i~~----------------~~las~-s~d~~v~iwd 67 (89)
..||||+.||....||.+..|.++ +|+. +..+..|. .+..| .+++++ .-+..+.+|.
T Consensus 242 ~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~ 321 (1283)
T KOG1916|consen 242 SLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWA 321 (1283)
T ss_pred eeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEee
Confidence 489999999999999999999876 4543 34556676 33333 344444 4566899999
Q ss_pred CCCCEEE
Q psy12376 68 HMTSKRV 74 (89)
Q Consensus 68 ~~~~~~~ 74 (89)
....++.
T Consensus 322 ~a~w~Cl 328 (1283)
T KOG1916|consen 322 EAPWQCL 328 (1283)
T ss_pred ccchhhh
Confidence 8765554
No 335
>KOG1275|consensus
Probab=92.94 E-value=0.63 Score=35.98 Aligned_cols=69 Identities=19% Similarity=0.224 Sum_probs=51.1
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEeeEec--CCcceeec---cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCCCCc
Q psy12376 17 QVLAIGTARGNLTVYNHMTSKRVPVLG--KHTNTIVG---QVLAIGTARGNLTVYNHMTSKRVPVLGKHTKSKP 85 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~~~~~~~~~~~--~h~~~i~~---~~las~s~d~~v~iwd~~~~~~~~~l~~h~~~~~ 85 (89)
..+.-|+-...+..+|.++.+..+... ...-.|.+ +++.+|...|+|.+-|.++.+.++++.+|++.++
T Consensus 148 ~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siS 221 (1118)
T KOG1275|consen 148 STLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSIS 221 (1118)
T ss_pred cceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCceeeeeecccccee
Confidence 445555555677777888776544432 22233444 7899999999999999999999999999998865
No 336
>PRK04043 tolB translocation protein TolB; Provisional
Probab=92.75 E-value=2.4 Score=29.78 Aligned_cols=33 Identities=12% Similarity=-0.005 Sum_probs=23.8
Q ss_pred EEEccCCCEEEEEeCC---------CcEEEEeCCCCeEeeEec
Q psy12376 10 LQTSQVGQVLAIGTAR---------GNLTVYNHMTSKRVPVLG 43 (89)
Q Consensus 10 ~~~spdg~~la~g~~~---------g~v~iwd~~~~~~~~~~~ 43 (89)
..|||||++||..... ..|.+.|..+++. +.+.
T Consensus 324 ~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT 365 (419)
T PRK04043 324 SSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLT 365 (419)
T ss_pred ceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECC
Confidence 4899999988877654 2688888877754 3443
No 337
>KOG3621|consensus
Probab=92.67 E-value=0.31 Score=36.33 Aligned_cols=65 Identities=26% Similarity=0.339 Sum_probs=44.2
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec---CCcceeec------cEEEEEeCCCCEEEEeCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG---KHTNTIVG------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~---~h~~~i~~------~~las~s~d~~v~iwd~~~ 70 (89)
..+..-+++..+++++.|+..|.+++|+...|+. +.+. ++...+.+ .++|.|+..|-|.++-+..
T Consensus 34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~-~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~ 107 (726)
T KOG3621|consen 34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEM-RKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNK 107 (726)
T ss_pred ceEEEEEeecCCceEEEecccceEEEEecCchhh-hcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhc
Confidence 3455566778889999999999999999877653 3222 22222111 6777778888888877753
No 338
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=92.65 E-value=0.41 Score=21.95 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=18.7
Q ss_pred EEEEeCCCcEEEEeCCCCeEeeEec
Q psy12376 19 LAIGTARGNLTVYNHMTSKRVPVLG 43 (89)
Q Consensus 19 la~g~~~g~v~iwd~~~~~~~~~~~ 43 (89)
+.+++.+|.+.-.|.++|+.+..++
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~ 27 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQ 27 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCCEEEeee
Confidence 4455778888888888888877664
No 339
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=92.65 E-value=2.2 Score=31.04 Aligned_cols=71 Identities=13% Similarity=0.191 Sum_probs=47.3
Q ss_pred cCCcEEEEEEccCCCEEEEEe--CCCcEEEEeCCCCeEeeEec-CCcceee-c---cEEEEEeCC---CCEEEEeCCCCE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGT--ARGNLTVYNHMTSKRVPVLG-KHTNTIV-G---QVLAIGTAR---GNLTVYNHMTSK 72 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~--~~g~v~iwd~~~~~~~~~~~-~h~~~i~-~---~~las~s~d---~~v~iwd~~~~~ 72 (89)
..++|-..+|+|++..+++.+ ..-.+.++|.+.+ ....+. .-...+. . +++..++-| |.+.|||..+..
T Consensus 273 ~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf 351 (561)
T COG5354 273 LKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRF 351 (561)
T ss_pred ccccceeeeecccCCceeEEecccccceeecccccc-eEEecCCcccccccccCcccEEEEecCCccccceEEeccCCce
Confidence 467899999999988776544 5779999999876 333222 2222232 1 677776665 488999987654
Q ss_pred EE
Q psy12376 73 RV 74 (89)
Q Consensus 73 ~~ 74 (89)
..
T Consensus 352 ~~ 353 (561)
T COG5354 352 KV 353 (561)
T ss_pred EE
Confidence 43
No 340
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=92.44 E-value=1.7 Score=33.02 Aligned_cols=62 Identities=18% Similarity=0.252 Sum_probs=44.9
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEeeEecCC--------------------cceeec-cEEEEEeC----------CCCEE
Q psy12376 16 GQVLAIGTARGNLTVYNHMTSKRVPVLGKH--------------------TNTIVG-QVLAIGTA----------RGNLT 64 (89)
Q Consensus 16 g~~la~g~~~g~v~iwd~~~~~~~~~~~~h--------------------~~~i~~-~~las~s~----------d~~v~ 64 (89)
+..+..++.|+.+.-.|.++|+.+..+... ..++.. ..++.|+. +|.|+
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~ 339 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIR 339 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEE
Confidence 457888999999999999999988765321 112222 56666643 68899
Q ss_pred EEeCCCCEEEeee
Q psy12376 65 VYNHMTSKRVPVL 77 (89)
Q Consensus 65 iwd~~~~~~~~~l 77 (89)
-+|.++|+..-..
T Consensus 340 A~Da~TGkl~W~~ 352 (764)
T TIGR03074 340 AFDVNTGALVWAW 352 (764)
T ss_pred EEECCCCcEeeEE
Confidence 9999999988654
No 341
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=92.38 E-value=0.43 Score=32.85 Aligned_cols=63 Identities=13% Similarity=0.155 Sum_probs=43.0
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCC-CeEeeEecCCc------------cee------ec----cEEEEEeCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHT------------NTI------VG----QVLAIGTARG 61 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~------------~~i------~~----~~las~s~d~ 61 (89)
..|+.+.|+++|+++++-+. -+|.+||.+. ..++....-|. ..| .+ +.+.+||..+
T Consensus 281 sSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~N 359 (460)
T COG5170 281 SSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSN 359 (460)
T ss_pred hhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCccccccccccc
Confidence 35888999999999998764 4999999875 33444443331 222 22 5677777777
Q ss_pred CEEEEeC
Q psy12376 62 NLTVYNH 68 (89)
Q Consensus 62 ~v~iwd~ 68 (89)
...||-.
T Consensus 360 Nfgiyp~ 366 (460)
T COG5170 360 NFGIYPT 366 (460)
T ss_pred ceeeecc
Confidence 7888774
No 342
>KOG4460|consensus
Probab=92.31 E-value=1.7 Score=31.98 Aligned_cols=69 Identities=14% Similarity=0.221 Sum_probs=44.4
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCC---------CeE---eeEec-------C-----------CcceeeccEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMT---------SKR---VPVLG-------K-----------HTNTIVGQVL 54 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~---------~~~---~~~~~-------~-----------h~~~i~~~~l 54 (89)
.+|..+..|+.|..+|..+-+|.+.++=.+. |+. ++.+. . |...|.+..|
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 3578889999999999999999777754221 221 11110 0 2222222677
Q ss_pred EEEeCCCCEEEEeCCCCEE
Q psy12376 55 AIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 55 as~s~d~~v~iwd~~~~~~ 73 (89)
..-+.|+.++|||+....-
T Consensus 184 ~iL~sdnviRiy~lS~~te 202 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSLSEPTE 202 (741)
T ss_pred EEEecCcEEEEEecCCcch
Confidence 7778999999999965443
No 343
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=92.21 E-value=1.5 Score=31.26 Aligned_cols=61 Identities=30% Similarity=0.452 Sum_probs=43.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEeeEecCCcc-----eeec------cEEEEEe---------CCCCEEEEeCCCCEEEee
Q psy12376 17 QVLAIGTARGNLTVYNHMTSKRVPVLGKHTN-----TIVG------QVLAIGT---------ARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~-----~i~~------~~las~s---------~d~~v~iwd~~~~~~~~~ 76 (89)
..+..++.+|.|+-+|.++|+.+........ .+.+ .+++.++ .++.|+..|..+|+..-.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~ 190 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR 190 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence 5777888899999999999998876653221 1222 4455554 367899999999987765
Q ss_pred e
Q psy12376 77 L 77 (89)
Q Consensus 77 l 77 (89)
.
T Consensus 191 ~ 191 (488)
T cd00216 191 F 191 (488)
T ss_pred e
Confidence 4
No 344
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=92.14 E-value=2 Score=27.37 Aligned_cols=70 Identities=10% Similarity=0.079 Sum_probs=44.5
Q ss_pred EEEEEEccCCCEEE-EEeCCCcEEEEeCCC-Ce-E-----eeEecCCc---ceee--c--cEEEEEeCCCCEEEEeCCCC
Q psy12376 7 IFLLQTSQVGQVLA-IGTARGNLTVYNHMT-SK-R-----VPVLGKHT---NTIV--G--QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 7 i~~~~~spdg~~la-~g~~~g~v~iwd~~~-~~-~-----~~~~~~h~---~~i~--~--~~las~s~d~~v~iwd~~~~ 71 (89)
...++|+||++.|. +-+..+.|..++... +. . +..+.... ..+. . ++.++....+.|.++|.+ |
T Consensus 136 pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G 214 (246)
T PF08450_consen 136 PNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-G 214 (246)
T ss_dssp EEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-S
T ss_pred ccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-c
Confidence 56899999998765 667788999999852 22 1 11222221 1121 1 677777788899999987 6
Q ss_pred EEEeee
Q psy12376 72 KRVPVL 77 (89)
Q Consensus 72 ~~~~~l 77 (89)
+.+..+
T Consensus 215 ~~~~~i 220 (246)
T PF08450_consen 215 KLLREI 220 (246)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 655543
No 345
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=92.11 E-value=1.9 Score=30.80 Aligned_cols=63 Identities=19% Similarity=0.147 Sum_probs=46.1
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc------e-------eec-cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 16 GQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN------T-------IVG-QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 16 g~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~------~-------i~~-~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
+..+..++.++.+.-.|..+|+.+..+..... . +.. ..+..++.|+.|+.+|.++|+.+-...
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~ 137 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFG 137 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeec
Confidence 34566778889999999999988766542211 1 112 577778899999999999998876543
No 346
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=92.09 E-value=0.61 Score=21.27 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=20.4
Q ss_pred cCCCEEEEEe-CCCcEEEEeCCCCeEeeEec
Q psy12376 14 QVGQVLAIGT-ARGNLTVYNHMTSKRVPVLG 43 (89)
Q Consensus 14 pdg~~la~g~-~~g~v~iwd~~~~~~~~~~~ 43 (89)
|++++|.++. .++.|.++|..+++.+..+.
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~ 31 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIP 31 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEE
Confidence 5677665544 47788888888777665543
No 347
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=91.85 E-value=0.82 Score=32.85 Aligned_cols=34 Identities=15% Similarity=0.071 Sum_probs=27.0
Q ss_pred EEEEEEcc----CCCEEEEEeCCCcEEEEeCCCCeEee
Q psy12376 7 IFLLQTSQ----VGQVLAIGTARGNLTVYNHMTSKRVP 40 (89)
Q Consensus 7 i~~~~~sp----dg~~la~g~~~g~v~iwd~~~~~~~~ 40 (89)
...++.++ +..+|++-+.|+++++||..+++++.
T Consensus 217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~ 254 (547)
T PF11715_consen 217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLA 254 (547)
T ss_dssp EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEE
T ss_pred cceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 55666766 66799999999999999999998844
No 348
>KOG2079|consensus
Probab=91.55 E-value=0.27 Score=38.34 Aligned_cols=63 Identities=21% Similarity=0.336 Sum_probs=46.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
.+-.+|+|+..|.+...|..+. ..+..++ -++++.+ .+++.|-.+|.|.+||+..++..+.+-
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~ 169 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVIT 169 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeee
Confidence 4457899999999999998753 2111121 2345555 788899999999999999888777664
No 349
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=91.42 E-value=0.48 Score=21.73 Aligned_cols=27 Identities=22% Similarity=0.218 Sum_probs=21.9
Q ss_pred EEEEEeCCCCEEEEeCCCCEEEeeeCC
Q psy12376 53 VLAIGTARGNLTVYNHMTSKRVPVLGK 79 (89)
Q Consensus 53 ~las~s~d~~v~iwd~~~~~~~~~l~~ 79 (89)
.+..++.||.|+-.|.++|+..-...-
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 456669999999999999998876543
No 350
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=90.88 E-value=2 Score=24.91 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=37.9
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----------cEEEEEeCCCCEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----------QVLAIGTARGNLTV 65 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----------~~las~s~d~~v~i 65 (89)
-.+.++++.-... ..|+.+..+|+|-+|+... +.-+.-..|+ +.+ .-|++|-.+|.|.+
T Consensus 41 e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~-RlWRiKSK~~--~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 41 ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ-RLWRIKSKNQ--VTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred cccceEEEEEcCC-CEEEEEecCCEEEEEeCcc-eeeeeccCCC--eEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 3456777777766 5789999999999998643 2222222232 222 46888888877643
No 351
>KOG1645|consensus
Probab=90.86 E-value=0.53 Score=33.18 Aligned_cols=32 Identities=19% Similarity=0.166 Sum_probs=27.6
Q ss_pred CcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCC
Q psy12376 5 YYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTS 36 (89)
Q Consensus 5 ~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~ 36 (89)
..+++++|.-|. .+|.+|..+|.|++||++.-
T Consensus 236 ~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 236 NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence 468999999865 58899999999999999863
No 352
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=90.71 E-value=2.5 Score=28.44 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=47.3
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCC-cc------eeec-----cEEEEEeCCCCEEEEeC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKH-TN------TIVG-----QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h-~~------~i~~-----~~las~s~d~~v~iwd~ 68 (89)
+.++...++|.+|++.=.-..|.+.|.++|+.+..+.+. .+ ...+ .++-.+..++.|.|+|=
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence 778888999999999888889999999999999888654 11 1111 45555567788888876
No 353
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=90.41 E-value=3.3 Score=30.04 Aligned_cols=61 Identities=25% Similarity=0.188 Sum_probs=42.8
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEeeEecC--Cc-------ceeec-cEEEEEe------CCCCEEEEeCCCCEEEeee
Q psy12376 17 QVLAIGTARGNLTVYNHMTSKRVPVLGK--HT-------NTIVG-QVLAIGT------ARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~-------~~i~~-~~las~s------~d~~v~iwd~~~~~~~~~l 77 (89)
..+..++.++.+.-.|.++|+.+..... +. .++.. ..++.+. .++.|..+|.++|+.+-..
T Consensus 121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~ 197 (527)
T TIGR03075 121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRR 197 (527)
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEec
Confidence 4677788899999999999998776542 11 12222 4444443 2689999999999987654
No 354
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.25 E-value=4.1 Score=27.77 Aligned_cols=68 Identities=12% Similarity=0.026 Sum_probs=49.6
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec--CCcc--eeec----cEEEEEeCCCCEEEEeCCCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG--KHTN--TIVG----QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~--~h~~--~i~~----~~las~s~d~~v~iwd~~~~ 71 (89)
...+++++|+|+.+.|.+-.+.+.-.|+=...|+.++.+. +-.+ .|.- .+.++-..++.+++..+..+
T Consensus 85 ~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 85 TANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred cccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 4458999999999999988888888888777898887754 2111 2222 56666677888888877543
No 355
>KOG0882|consensus
Probab=90.20 E-value=0.66 Score=33.24 Aligned_cols=75 Identities=11% Similarity=-0.002 Sum_probs=54.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC------CeEeeEec---------CCcceeec-------cEEEEEeCC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT------SKRVPVLG---------KHTNTIVG-------QVLAIGTAR 60 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~------~~~~~~~~---------~h~~~i~~-------~~las~s~d 60 (89)
|..+|.++.+.|.+..+++....|.|.-|.... ++....+. ..+....+ ..+++-+.|
T Consensus 143 H~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~D 222 (558)
T KOG0882|consen 143 HFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPD 222 (558)
T ss_pred ccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcc
Confidence 456799999999999999999999999999863 11111111 11111111 788888999
Q ss_pred CCEEEEeCCCCEEEeee
Q psy12376 61 GNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 61 ~~v~iwd~~~~~~~~~l 77 (89)
..|++++.++++.++.+
T Consensus 223 rkVR~F~~KtGklvqei 239 (558)
T KOG0882|consen 223 RKVRGFVFKTGKLVQEI 239 (558)
T ss_pred cEEEEEEeccchhhhhh
Confidence 99999999999887765
No 356
>KOG2041|consensus
Probab=90.13 E-value=1 Score=34.31 Aligned_cols=68 Identities=12% Similarity=0.114 Sum_probs=47.5
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
+|...|.-+.|.-..+.|-++..+|.|.+|-+..|..+..+.. .++.|.+ ..++..-.||.|.+=.++
T Consensus 69 GH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd 145 (1189)
T KOG2041|consen 69 GHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD 145 (1189)
T ss_pred cCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec
Confidence 5778899999999999999999999999999887754332221 1223332 566666667666554443
No 357
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=89.95 E-value=1.8 Score=29.88 Aligned_cols=52 Identities=31% Similarity=0.438 Sum_probs=32.4
Q ss_pred cEEEEeCCCCeEeeEec-CCcc-ee--ec---cEEE-EEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 27 NLTVYNHMTSKRVPVLG-KHTN-TI--VG---QVLA-IGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 27 ~v~iwd~~~~~~~~~~~-~h~~-~i--~~---~~la-s~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
+|-++|..+++.++.+. .+.. .| .. .+|. ....++.+.+||..+|+.+..+.
T Consensus 270 eVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred EEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 46666778888877665 2221 12 11 4554 44568999999999999988775
No 358
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=89.88 E-value=4.2 Score=27.02 Aligned_cols=27 Identities=19% Similarity=0.308 Sum_probs=22.0
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEeeEec
Q psy12376 17 QVLAIGTARGNLTVYNHMTSKRVPVLG 43 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~~~~~~~~~~~ 43 (89)
..|+.|+.+|.|+|.|......+.+++
T Consensus 196 scLViGTE~~~i~iLd~~af~il~~~~ 222 (257)
T PF14779_consen 196 SCLVIGTESGEIYILDPQAFTILKQVQ 222 (257)
T ss_pred ceEEEEecCCeEEEECchhheeEEEEe
Confidence 489999999999999998766655543
No 359
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=89.78 E-value=1.7 Score=33.26 Aligned_cols=51 Identities=18% Similarity=0.326 Sum_probs=34.9
Q ss_pred EEEEEeCCCcEEEEeCCC-C-eEeeEecCC----cceeec------cEEEEEeCCCCEEEEeCC
Q psy12376 18 VLAIGTARGNLTVYNHMT-S-KRVPVLGKH----TNTIVG------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 18 ~la~g~~~g~v~iwd~~~-~-~~~~~~~~h----~~~i~~------~~las~s~d~~v~iwd~~ 69 (89)
.-..|-.+..+..||+|- + +.+. -+.| +....| .+||.||.+|.|++||-.
T Consensus 544 ~tflGls~n~lfriDpR~~~~k~v~-~~~k~Y~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~ 606 (794)
T PF08553_consen 544 QTFLGLSDNSLFRIDPRLSGNKLVD-SQSKQYSSKNNFSCFATTEDGYIAVGSNKGDIRLYDRL 606 (794)
T ss_pred ceEEEECCCceEEeccCCCCCceee-ccccccccCCCceEEEecCCceEEEEeCCCcEEeeccc
Confidence 446677788999999985 3 2221 1122 223333 899999999999999953
No 360
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=89.61 E-value=4.3 Score=26.71 Aligned_cols=65 Identities=9% Similarity=0.010 Sum_probs=41.3
Q ss_pred CCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEec--CCcc--eeec----cEEEEEeCCCCEEEEeCC
Q psy12376 4 RYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLG--KHTN--TIVG----QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 4 ~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~--~h~~--~i~~----~~las~s~d~~v~iwd~~ 69 (89)
.+.++.++|.|+.. .+|+....+.|.-++. +|+.++.+. +..+ .|.- .++++-..++.+.+.++.
T Consensus 21 ~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 21 LDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp -S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred cCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 45699999999755 6677777888888886 577777653 3222 2322 455555568889988883
No 361
>KOG2247|consensus
Probab=89.51 E-value=0.13 Score=37.04 Aligned_cols=60 Identities=33% Similarity=0.483 Sum_probs=49.5
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeC
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~ 68 (89)
.+.|++.+..++.|...|.+.|++..+.+.+.....|..++.+ .+.+.++.|..+.+-..
T Consensus 122 ll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~dcd~~L~v~~q 187 (615)
T KOG2247|consen 122 LLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCDCDNTLSVTTQ 187 (615)
T ss_pred HHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecCcHHHHHHhhh
Confidence 4789999999999999999999999888877777778887766 78888888876655443
No 362
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=89.37 E-value=5.1 Score=27.19 Aligned_cols=69 Identities=14% Similarity=0.104 Sum_probs=38.7
Q ss_pred EEEEEccCCCEEEEE-eCCCcEEEEeCCC--CeE----eeE-ec---CCcce--eec--cEEEEEeCCC-CEEEEeCCCC
Q psy12376 8 FLLQTSQVGQVLAIG-TARGNLTVYNHMT--SKR----VPV-LG---KHTNT--IVG--QVLAIGTARG-NLTVYNHMTS 71 (89)
Q Consensus 8 ~~~~~spdg~~la~g-~~~g~v~iwd~~~--~~~----~~~-~~---~h~~~--i~~--~~las~s~d~-~v~iwd~~~~ 71 (89)
..|+||||++.|... +..+.|..|+... +.. ... +. +.-+. +-+ ++-+++-.+| .|.+|+.+ +
T Consensus 166 NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G 244 (307)
T COG3386 166 NGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-G 244 (307)
T ss_pred CceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-C
Confidence 479999999766544 4457888887642 211 111 11 11111 112 5554554544 89999997 6
Q ss_pred EEEeee
Q psy12376 72 KRVPVL 77 (89)
Q Consensus 72 ~~~~~l 77 (89)
+++...
T Consensus 245 ~l~~~i 250 (307)
T COG3386 245 KLLGEI 250 (307)
T ss_pred cEEEEE
Confidence 655543
No 363
>KOG4649|consensus
Probab=89.18 E-value=5.2 Score=27.11 Aligned_cols=63 Identities=13% Similarity=0.101 Sum_probs=47.2
Q ss_pred cCC-CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 14 QVG-QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 14 pdg-~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+|. .++++|+-.+.+.--|.++|+.+.+-. -..+|.+ ++++.|-..+.+++-++.+|.+...+
T Consensus 20 ~dskT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f 89 (354)
T KOG4649|consen 20 NDSKTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNF 89 (354)
T ss_pred cCCceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeee
Confidence 443 477899999999999999998755321 1234444 89999999999999999998665543
No 364
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=89.10 E-value=1.9 Score=29.66 Aligned_cols=34 Identities=29% Similarity=0.363 Sum_probs=26.6
Q ss_pred EEEEEEccCCCEEEEE-eCCC----cEEEEeCCCCeEee
Q psy12376 7 IFLLQTSQVGQVLAIG-TARG----NLTVYNHMTSKRVP 40 (89)
Q Consensus 7 i~~~~~spdg~~la~g-~~~g----~v~iwd~~~~~~~~ 40 (89)
+....+||||+++|.+ +..| .++++|+.+|+.+.
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~ 164 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLP 164 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcC
Confidence 3467999999999876 3344 59999999998754
No 365
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=89.02 E-value=0.72 Score=31.76 Aligned_cols=40 Identities=28% Similarity=0.316 Sum_probs=28.2
Q ss_pred CcEEEEEEccCCC-EEE-EEeCCCcEEEEeCCCCeEeeEecC
Q psy12376 5 YYIFLLQTSQVGQ-VLA-IGTARGNLTVYNHMTSKRVPVLGK 44 (89)
Q Consensus 5 ~~i~~~~~spdg~-~la-~g~~~g~v~iwd~~~~~~~~~~~~ 44 (89)
.++.+++.+.|.+ .|. +...++.+.+||..+|+.++.+..
T Consensus 289 ~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 289 HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 4567899999876 553 345688999999999999887753
No 366
>KOG2114|consensus
Probab=88.55 E-value=5.2 Score=30.95 Aligned_cols=76 Identities=11% Similarity=0.067 Sum_probs=48.6
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE--eeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR--VPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~--~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
.++|+.+++--|++-++-......|.+|.+. |+. ...+..|...+.| ..|++| .+..|.+|+....+.-
T Consensus 171 ~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~-gr~p~~~~ld~~G~~lnCss~~~~t~qfIca-~~e~l~fY~sd~~~~c 248 (933)
T KOG2114|consen 171 KEPITGLALRSDGKSVLFVATTEQVMLYSLS-GRTPSLKVLDNNGISLNCSSFSDGTYQFICA-GSEFLYFYDSDGRGPC 248 (933)
T ss_pred CCCceeeEEecCCceeEEEEecceeEEEEec-CCCcceeeeccCCccceeeecCCCCccEEEe-cCceEEEEcCCCccee
Confidence 4689999999999862222334578999887 444 3345567777877 325554 4456999998654433
Q ss_pred eeeC-CCC
Q psy12376 75 PVLG-KHT 81 (89)
Q Consensus 75 ~~l~-~h~ 81 (89)
..+. +|.
T Consensus 249 faf~~g~k 256 (933)
T KOG2114|consen 249 FAFEVGEK 256 (933)
T ss_pred eeecCCCe
Confidence 3444 443
No 367
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=88.48 E-value=3.8 Score=24.62 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=47.5
Q ss_pred EEEEEeCCCcEEEEeCCCCeEeeEecC-Ccceeec------------------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 18 VLAIGTARGNLTVYNHMTSKRVPVLGK-HTNTIVG------------------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 18 ~la~g~~~g~v~iwd~~~~~~~~~~~~-h~~~i~~------------------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
..+.+..||.+.+++..+|+.+..+.. ..+.|+. .+-..--+||.+.+-|..++..+...
T Consensus 43 l~f~d~~~G~v~V~~~~~G~~va~~~~g~~GFvrgvlR~l~R~R~~~gv~~~~Pf~L~r~~dGrltL~Dp~Tg~~i~L~ 121 (135)
T TIGR03054 43 LVFEDRPDGAVAVVETPDGRLVAILEPGQNGFVRVMLRGLARARARAGVAAEPPFRLTRYDNGRLTLTDPATGWSIELN 121 (135)
T ss_pred EEEecCCCCeEEEEECCCCCEEEEecCCCCchhhHhHHHHHHHHHHcCCCCCCCEEEEEEeCCcEEEEcCCCCcEEEEe
Confidence 445667899999999999999988854 4444442 68888899999999999999887643
No 368
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=88.44 E-value=1.2 Score=18.97 Aligned_cols=25 Identities=8% Similarity=0.183 Sum_probs=16.6
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEE
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVY 31 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iw 31 (89)
...++.+++|+.+++-+.+..|.+|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 4567777777777776666666553
No 369
>KOG4499|consensus
Probab=88.24 E-value=4.6 Score=26.95 Aligned_cols=77 Identities=14% Similarity=0.025 Sum_probs=48.7
Q ss_pred EEEEEccCCCE-EEEEeCCCcEEEEe--CCCCeE-----eeEec---CCcc------eeec--cEEEEEeCCCCEEEEeC
Q psy12376 8 FLLQTSQVGQV-LAIGTARGNLTVYN--HMTSKR-----VPVLG---KHTN------TIVG--QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 8 ~~~~~spdg~~-la~g~~~g~v~iwd--~~~~~~-----~~~~~---~h~~------~i~~--~~las~s~d~~v~iwd~ 68 (89)
..++|+.|.+. ..+-+.+-+|.-|| ..+|.. +..+. .... .|.. ++.+++-.-++|.-.|.
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp 240 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP 240 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence 36799988764 45666677887888 445532 22222 1111 2222 77888888899999999
Q ss_pred CCCEEEeeeCCCCCCC
Q psy12376 69 MTSKRVPVLGKHTKSK 84 (89)
Q Consensus 69 ~~~~~~~~l~~h~~~~ 84 (89)
.+|+.+..+.--+.++
T Consensus 241 ~tGK~L~eiklPt~qi 256 (310)
T KOG4499|consen 241 TTGKILLEIKLPTPQI 256 (310)
T ss_pred CCCcEEEEEEcCCCce
Confidence 9998887654334333
No 370
>KOG2103|consensus
Probab=87.74 E-value=7.9 Score=29.90 Aligned_cols=77 Identities=13% Similarity=0.030 Sum_probs=52.7
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE-ecCCcceeec-cEEEEEe-CCCCEEEEeCCCCEEEeeeCCCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV-LGKHTNTIVG-QVLAIGT-ARGNLTVYNHMTSKRVPVLGKHTK 82 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~-~~~h~~~i~~-~~las~s-~d~~v~iwd~~~~~~~~~l~~h~~ 82 (89)
.+..+.+++-.+.|...+..|.+.-.+.++|+.+.. .-+.+..... .+.-+-| +...+++||...|.....+.-|.+
T Consensus 37 k~~~~~~~t~~~rlivsT~~~vlAsL~~~tGei~WRqvl~~~~~~~~~~~~~~iS~dg~~lr~wn~~~g~l~~~i~l~~g 116 (910)
T KOG2103|consen 37 KVNFLVYDTKSKRLIVSTEKGVLASLNLRTGEIIWRQVLEPKTSGLGVPLTNTISVDGRYLRSWNTNNGILDWEIELADG 116 (910)
T ss_pred eEEEEeecCCCceEEEEeccchhheecccCCcEEEEEeccCCCcccCcceeEEEccCCcEEEeecCCCceeeeecccccc
Confidence 578899999999999999999999999999987643 2121111112 2222233 344799999998877766654443
No 371
>PHA02713 hypothetical protein; Provisional
Probab=87.51 E-value=1.4 Score=32.11 Aligned_cols=69 Identities=10% Similarity=0.131 Sum_probs=43.5
Q ss_pred CCCEEEEEeCC------CcEEEEeCCC-CeE--eeEecC----Ccceeec-cEEEEEeCCC--CEEEEeCCCCEEEeeeC
Q psy12376 15 VGQVLAIGTAR------GNLTVYNHMT-SKR--VPVLGK----HTNTIVG-QVLAIGTARG--NLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 15 dg~~la~g~~~------g~v~iwd~~~-~~~--~~~~~~----h~~~i~~-~~las~s~d~--~v~iwd~~~~~~~~~l~ 78 (89)
+|+..+.|+.+ ..+..||..+ .+- +..+.. +...+.. ++.+.|+.|+ ++..||+.+++....-.
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~ 542 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILHDNTIMMLHCYESYMLQDTFNVYTYEWNHICH 542 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEECCEEEEEeeecceeehhhcCcccccccchhh
Confidence 45656666543 2467888876 332 222221 1111111 7899999898 89999999988877777
Q ss_pred CCCCC
Q psy12376 79 KHTKS 83 (89)
Q Consensus 79 ~h~~~ 83 (89)
.|+++
T Consensus 543 ~~~~~ 547 (557)
T PHA02713 543 QHSNS 547 (557)
T ss_pred hcCCc
Confidence 77765
No 372
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=87.25 E-value=5.4 Score=28.48 Aligned_cols=28 Identities=14% Similarity=0.336 Sum_probs=20.9
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~ 35 (89)
...+.++|+|+++++ +.+|...|+....
T Consensus 35 p~~ls~npngr~v~V-~g~geY~iyt~~~ 62 (443)
T PF04053_consen 35 PQSLSHNPNGRFVLV-CGDGEYEIYTALA 62 (443)
T ss_dssp -SEEEE-TTSSEEEE-EETTEEEEEETTT
T ss_pred CeeEEECCCCCEEEE-EcCCEEEEEEccC
Confidence 578899999998888 6688888887544
No 373
>KOG2395|consensus
Probab=86.90 E-value=2.3 Score=31.20 Aligned_cols=60 Identities=17% Similarity=0.356 Sum_probs=38.4
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE-eeEecCCcceeec------cEEEEEeCCCCEEEEeC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR-VPVLGKHTNTIVG------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~-~~~~~~h~~~i~~------~~las~s~d~~v~iwd~ 68 (89)
..|.+-.-+| ++|+|+.+|.|++||. .++. ...+++-..+|.- ...+.|..+..+.+-++
T Consensus 433 Fsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~t 499 (644)
T KOG2395|consen 433 FSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLLLIDT 499 (644)
T ss_pred cceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEecccEEEEEEE
Confidence 5566666666 8899999999999997 4443 2345554455433 33333456666666665
No 374
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=86.72 E-value=8.5 Score=26.71 Aligned_cols=38 Identities=8% Similarity=-0.043 Sum_probs=28.9
Q ss_pred cEEEEEEccCCCEEEEEeC-CCcEEEEeCCCC-eEeeEec
Q psy12376 6 YIFLLQTSQVGQVLAIGTA-RGNLTVYNHMTS-KRVPVLG 43 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~-~g~v~iwd~~~~-~~~~~~~ 43 (89)
....|.|+|+|++..+.+. +++|.+|..... ..+..++
T Consensus 192 GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ 231 (346)
T COG2706 192 GPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQ 231 (346)
T ss_pred CcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEee
Confidence 3578999999998877777 889999998762 3344444
No 375
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=86.66 E-value=4.1 Score=26.29 Aligned_cols=54 Identities=31% Similarity=0.443 Sum_probs=32.9
Q ss_pred cCCCEEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 14 QVGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 14 pdg~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
..++.|+.|+.+| +.+++... .+....... ..|.- +.++.- .|+.++++++..-
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~--~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l 66 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILKL--SSITQLSVLPELNLLLVL-SDGQLYVYDLDSL 66 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEeec--ceEEEEEEecccCEEEEE-cCCccEEEEchhh
Confidence 3578999999998 89999832 222222211 11222 444444 3599999998653
No 376
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=86.58 E-value=1.8 Score=19.81 Aligned_cols=21 Identities=33% Similarity=0.501 Sum_probs=14.8
Q ss_pred CCCEEEEEeCCCcEEEEeCCC
Q psy12376 15 VGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~ 35 (89)
.+..+..++.+|.++.+|+++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 455788888888888888753
No 377
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=86.46 E-value=1.8 Score=26.60 Aligned_cols=30 Identities=27% Similarity=0.316 Sum_probs=25.4
Q ss_pred cEEEEEEccCC------CEEEEEeCCCcEEEEeCCC
Q psy12376 6 YIFLLQTSQVG------QVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 6 ~i~~~~~spdg------~~la~g~~~g~v~iwd~~~ 35 (89)
.+..++|||.| ..||+-+.+|.|.||....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 58899999965 4788999999999998764
No 378
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=86.04 E-value=5.6 Score=28.23 Aligned_cols=65 Identities=17% Similarity=0.271 Sum_probs=41.0
Q ss_pred EEEEccCCCEEEEEeCCCcEEE---EeCC-----CCeEeeEecC---Cc--ceeec------------------cEEEEE
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTV---YNHM-----TSKRVPVLGK---HT--NTIVG------------------QVLAIG 57 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~i---wd~~-----~~~~~~~~~~---h~--~~i~~------------------~~las~ 57 (89)
.++.+|+|+.||.+..+.-+.+ |+.. .+.....+.+ +. ..|++ ..++.|
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG 85 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG 85 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence 5788999999999987776665 5331 1112111111 11 23333 579999
Q ss_pred eCCCCEEEEeCCCCEEE
Q psy12376 58 TARGNLTVYNHMTSKRV 74 (89)
Q Consensus 58 s~d~~v~iwd~~~~~~~ 74 (89)
..+|.|++|... |..+
T Consensus 86 ~ssG~vrfyte~-G~LL 101 (415)
T PF14655_consen 86 TSSGYVRFYTEN-GVLL 101 (415)
T ss_pred ecccEEEEEecc-chHH
Confidence 999999999973 4443
No 379
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=85.86 E-value=12 Score=28.71 Aligned_cols=62 Identities=15% Similarity=0.120 Sum_probs=46.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc------------------------------eeec-cEEEEEeCCCCEE
Q psy12376 16 GQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN------------------------------TIVG-QVLAIGTARGNLT 64 (89)
Q Consensus 16 g~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~------------------------------~i~~-~~las~s~d~~v~ 64 (89)
+..+..++.++.|.-.|.++|+.+..+..... +..| ..++.++.|+.|.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 55777778889999999999998776643211 0112 4788888999999
Q ss_pred EEeCCCCEEEeee
Q psy12376 65 VYNHMTSKRVPVL 77 (89)
Q Consensus 65 iwd~~~~~~~~~l 77 (89)
-.|.++|+....+
T Consensus 274 ALDA~TGk~~W~f 286 (764)
T TIGR03074 274 ALDADTGKLCEDF 286 (764)
T ss_pred EEECCCCCEEEEe
Confidence 9999999887654
No 380
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=85.73 E-value=5.8 Score=23.88 Aligned_cols=63 Identities=21% Similarity=0.277 Sum_probs=38.9
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCe--------EeeEecCCcceeec------------cEEEEEeCCCCEEEEeC
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMTSK--------RVPVLGKHTNTIVG------------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~~~--------~~~~~~~h~~~i~~------------~~las~s~d~~v~iwd~ 68 (89)
.-.|......|++++..|+|.|++..... .++.+. -+..|.| ..|..| ...++..||+
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliG-t~t~llaYDV 80 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIG-TQTSLLAYDV 80 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEe-ccceEEEEEc
Confidence 34566666799999999999999875422 112221 1122222 456665 4556999999
Q ss_pred CCCEE
Q psy12376 69 MTSKR 73 (89)
Q Consensus 69 ~~~~~ 73 (89)
..+.-
T Consensus 81 ~~N~d 85 (136)
T PF14781_consen 81 ENNSD 85 (136)
T ss_pred ccCch
Confidence 76543
No 381
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=85.42 E-value=1.5 Score=28.16 Aligned_cols=24 Identities=33% Similarity=0.250 Sum_probs=20.7
Q ss_pred cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 52 QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 52 ~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+++.+-+.+|.+++||+..++...
T Consensus 23 ~~Ll~iT~~G~l~vWnl~~~k~~~ 46 (219)
T PF07569_consen 23 SYLLAITSSGLLYVWNLKKGKAVL 46 (219)
T ss_pred CEEEEEeCCCeEEEEECCCCeecc
Confidence 788889999999999998876643
No 382
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=85.07 E-value=7.7 Score=24.70 Aligned_cols=69 Identities=12% Similarity=-0.016 Sum_probs=43.5
Q ss_pred EEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEee-EecCCcc-eee-c-cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 8 FLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVP-VLGKHTN-TIV-G-QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 8 ~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~-~~~~h~~-~i~-~-~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.+..|.+ +|.++.+....+.|+.|+..+++... .+....+ .+. . ..|..+..+ .+.++|..+++.....
T Consensus 3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~~~G~~~~~~~g~l~v~~~~-~~~~~d~~~g~~~~~~ 76 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPGPNGMAFDRPDGRLYVADSG-GIAVVDPDTGKVTVLA 76 (246)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSSEEEEEEECTTSEEEEEETT-CEEEEETTTTEEEEEE
T ss_pred cceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCCCceEEEEccCCEEEEEEcC-ceEEEecCCCcEEEEe
Confidence 4688998 77777887789999999998876532 2222111 122 1 445555444 4666699888665543
No 383
>KOG4499|consensus
Probab=84.92 E-value=7.5 Score=26.00 Aligned_cols=42 Identities=14% Similarity=0.137 Sum_probs=32.1
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec
Q psy12376 10 LQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG 51 (89)
Q Consensus 10 ~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~ 51 (89)
++...+|+..++....|+|...|..+|+.+.++.-....|.|
T Consensus 217 m~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qits 258 (310)
T KOG4499|consen 217 MTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITS 258 (310)
T ss_pred ceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEE
Confidence 344567888888888899999999999988776544555554
No 384
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=84.88 E-value=3.7 Score=27.89 Aligned_cols=62 Identities=16% Similarity=0.239 Sum_probs=38.0
Q ss_pred ccCCCEEEEE---------eCCCcEEEEeCCCCeEeeEecC---Ccceeec---cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 13 SQVGQVLAIG---------TARGNLTVYNHMTSKRVPVLGK---HTNTIVG---QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 13 spdg~~la~g---------~~~g~v~iwd~~~~~~~~~~~~---h~~~i~~---~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
|||+++++.. +..+.+.++|+.+++....... -..+..+ +.+|.. .++.|++++..++...+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v-~~~nly~~~~~~~~~~~ 77 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFV-RDNNLYLRDLATGQETQ 77 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEE-ETTEEEEESSTTSEEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEE-ecCceEEEECCCCCeEE
Confidence 6888888773 2346899999998765433222 1112222 666665 46789999987775443
No 385
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=84.66 E-value=3.5 Score=29.23 Aligned_cols=62 Identities=18% Similarity=0.231 Sum_probs=33.5
Q ss_pred EEEEccCCCEEEE-EeCCC--cEEEEeCCCCeEeeEecCCcceeec---------cEEEEEeCCC--CEEEEeCCCCE
Q psy12376 9 LLQTSQVGQVLAI-GTARG--NLTVYNHMTSKRVPVLGKHTNTIVG---------QVLAIGTARG--NLTVYNHMTSK 72 (89)
Q Consensus 9 ~~~~spdg~~la~-g~~~g--~v~iwd~~~~~~~~~~~~h~~~i~~---------~~las~s~d~--~v~iwd~~~~~ 72 (89)
.-+|||||+.||- ...|| .|+++|..++. .+.+.. ...+.+ .++++.+..| .|.++|.+.+.
T Consensus 242 ~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~-~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~ 317 (425)
T COG0823 242 APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTN-GFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ 317 (425)
T ss_pred CccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ceeccc-CCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc
Confidence 4589999997764 44466 55556665544 343432 111111 4455555555 45555665443
No 386
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=84.06 E-value=9 Score=24.70 Aligned_cols=28 Identities=14% Similarity=0.051 Sum_probs=21.4
Q ss_pred cEEEEEeCCCCEEEEeCCCCEEEeeeCCC
Q psy12376 52 QVLAIGTARGNLTVYNHMTSKRVPVLGKH 80 (89)
Q Consensus 52 ~~las~s~d~~v~iwd~~~~~~~~~l~~h 80 (89)
.||+..+.+ .|.||++.+++.++.+...
T Consensus 239 pyli~~~~~-~iEV~~~~~~~lvQ~i~~~ 266 (275)
T PF00780_consen 239 PYLIAFSSN-SIEVRSLETGELVQTIPLP 266 (275)
T ss_pred CEEEEECCC-EEEEEECcCCcEEEEEECC
Confidence 677776654 4999999999888877643
No 387
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=83.73 E-value=11 Score=25.51 Aligned_cols=69 Identities=13% Similarity=0.117 Sum_probs=42.9
Q ss_pred EEEEEEccCCCEEEEEeC----CCcEEEEeCCC--CeE--eeEec-CCccee--ec----cEEEEE-eCCCCEEEEeCCC
Q psy12376 7 IFLLQTSQVGQVLAIGTA----RGNLTVYNHMT--SKR--VPVLG-KHTNTI--VG----QVLAIG-TARGNLTVYNHMT 70 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~----~g~v~iwd~~~--~~~--~~~~~-~h~~~i--~~----~~las~-s~d~~v~iwd~~~ 70 (89)
.+.++++|++++|.+... +|.|..|++.. ++. +.... .-..+. .. ++|+.+ -.+++|.++++..
T Consensus 39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~ 118 (345)
T PF10282_consen 39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDD 118 (345)
T ss_dssp ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccC
Confidence 567899999999988877 56898888764 443 22222 111221 11 455544 5799999999975
Q ss_pred -CEEEe
Q psy12376 71 -SKRVP 75 (89)
Q Consensus 71 -~~~~~ 75 (89)
+....
T Consensus 119 ~g~l~~ 124 (345)
T PF10282_consen 119 DGSLGE 124 (345)
T ss_dssp TSEEEE
T ss_pred Ccccce
Confidence 44433
No 388
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=83.62 E-value=6.7 Score=29.82 Aligned_cols=65 Identities=9% Similarity=0.134 Sum_probs=44.5
Q ss_pred CCcEEEEEEc--cCCCEEEEEeCCCcEEEEeCCC--CeEee--Ee-cCCcce-e---ec----c---EEEEEeCCCCEEE
Q psy12376 4 RYYIFLLQTS--QVGQVLAIGTARGNLTVYNHMT--SKRVP--VL-GKHTNT-I---VG----Q---VLAIGTARGNLTV 65 (89)
Q Consensus 4 ~~~i~~~~~s--pdg~~la~g~~~g~v~iwd~~~--~~~~~--~~-~~h~~~-i---~~----~---~las~s~d~~v~i 65 (89)
....++++++ ....+||+++....|.||-... .+... .. ..|+-+ | .+ . .+++++-.|.+.+
T Consensus 163 ~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~ 242 (717)
T PF08728_consen 163 GASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWT 242 (717)
T ss_pred CCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEE
Confidence 4568999998 7788999999999888887543 22111 11 123222 1 11 2 7899999999999
Q ss_pred EeC
Q psy12376 66 YNH 68 (89)
Q Consensus 66 wd~ 68 (89)
|++
T Consensus 243 ~~I 245 (717)
T PF08728_consen 243 FKI 245 (717)
T ss_pred EEE
Confidence 888
No 389
>KOG2727|consensus
Probab=83.54 E-value=1.1 Score=34.78 Aligned_cols=71 Identities=18% Similarity=0.190 Sum_probs=53.9
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcce----ee------------c----cEEEEEeCCCCEEEE
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNT----IV------------G----QVLAIGTARGNLTVY 66 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~----i~------------~----~~las~s~d~~v~iw 66 (89)
-..++.||+|.+.|+...=|.|.+.|+..+..++.+.|+.+. |. . -+.+.+=+.|-+.||
T Consensus 324 ge~lslSP~gtlAAVTD~lgRVlLlDta~~ivvr~wKGYRDAsc~fv~vkek~~~s~~~~sRvAlFLvIyAPRrgiLEVW 403 (1244)
T KOG2727|consen 324 GEKLSLSPSGTLAAVTDSLGRVLLLDTAALIVVRLWKGYRDASCVFVEVKEKKGKSEPVKSRVALFLVIYAPRRGILEVW 403 (1244)
T ss_pred cceeeeCCCccEEEEecccCcEEEEehhhhhHHHHhcccccceeEEEEcccccCCCccCcCceeEEEEEecccccHHHHH
Confidence 467899999999999888899999999887776666665331 21 0 245567788899999
Q ss_pred eCCCCEEEeee
Q psy12376 67 NHMTSKRVPVL 77 (89)
Q Consensus 67 d~~~~~~~~~l 77 (89)
.+.+|.++..+
T Consensus 404 ~~q~gpRV~Af 414 (1244)
T KOG2727|consen 404 QMQTGPRVLAF 414 (1244)
T ss_pred HhccCCeEEEE
Confidence 99988877654
No 390
>KOG2247|consensus
Probab=82.78 E-value=0.13 Score=37.08 Aligned_cols=81 Identities=25% Similarity=0.437 Sum_probs=55.9
Q ss_pred CCcEEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEee-Eec-CCcceeec-----cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 4 RYYIFLLQTSQVGQVL-AIGTARGNLTVYNHMTSKRVP-VLG-KHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 4 ~~~i~~~~~spdg~~l-a~g~~~g~v~iwd~~~~~~~~-~~~-~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+.....++|..+|..+ +.+-..+.+.+||+.+...-. .+. .|...+.. ..++.+...+.+.|++-.+.....
T Consensus 74 tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~ii 153 (615)
T KOG2247|consen 74 TGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRII 153 (615)
T ss_pred chhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhh
Confidence 3445678899988755 455668899999987632111 111 13222222 567778899999999999888888
Q ss_pred eeCCCCCCC
Q psy12376 76 VLGKHTKSK 84 (89)
Q Consensus 76 ~l~~h~~~~ 84 (89)
.+++|.++.
T Consensus 154 v~Gkh~RRg 162 (615)
T KOG2247|consen 154 VMGKHQRRG 162 (615)
T ss_pred hhcccccce
Confidence 899998874
No 391
>PRK10115 protease 2; Provisional
Probab=82.09 E-value=19 Score=27.09 Aligned_cols=32 Identities=9% Similarity=0.012 Sum_probs=24.9
Q ss_pred EEEEEEccCCCEEEEEeCCC-----cEEEEeCCCCeE
Q psy12376 7 IFLLQTSQVGQVLAIGTARG-----NLTVYNHMTSKR 38 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g-----~v~iwd~~~~~~ 38 (89)
+..+.|||||++||.+.+.+ .+++.|..+|+.
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~ 165 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNW 165 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCC
Confidence 67789999999998765532 588888888764
No 392
>PHA03098 kelch-like protein; Provisional
Probab=81.97 E-value=12 Score=26.74 Aligned_cols=74 Identities=23% Similarity=0.340 Sum_probs=39.7
Q ss_pred cCCCEEEEEeCCC--------cEEEEeCCCCeEeeE--ec----CCcceeec-cEEEEEeCC-----CCEEEEeCCCCEE
Q psy12376 14 QVGQVLAIGTARG--------NLTVYNHMTSKRVPV--LG----KHTNTIVG-QVLAIGTAR-----GNLTVYNHMTSKR 73 (89)
Q Consensus 14 pdg~~la~g~~~g--------~v~iwd~~~~~~~~~--~~----~h~~~i~~-~~las~s~d-----~~v~iwd~~~~~~ 73 (89)
.+++.++.|+.+. .+.+||..+++-... +. .|...+.. ++++.|+.+ +.+.+||..+++.
T Consensus 436 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 515 (534)
T PHA03098 436 HDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTNTW 515 (534)
T ss_pred ECCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCCCEE
Confidence 3556666665432 388888877543211 11 01111111 667777664 5799999987766
Q ss_pred EeeeCCCCCCCcCCC
Q psy12376 74 VPVLGKHTKSKPSTE 88 (89)
Q Consensus 74 ~~~l~~h~~~~~~~~ 88 (89)
.. +...++.+.+.|
T Consensus 516 ~~-~~~~p~~~~~~~ 529 (534)
T PHA03098 516 TL-FCKFPKVIGSLE 529 (534)
T ss_pred Ee-cCCCccccccee
Confidence 43 334444444443
No 393
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=81.41 E-value=3.7 Score=27.93 Aligned_cols=32 Identities=19% Similarity=0.107 Sum_probs=25.6
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR 38 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~ 38 (89)
.+....|||+|+.+|... ++.|.+++..+++.
T Consensus 44 ~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~ 75 (353)
T PF00930_consen 44 KLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQE 75 (353)
T ss_dssp TBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEE
T ss_pred ccccceeecCCCeeEEEe-cCceEEEECCCCCe
Confidence 467899999999999876 57999999877744
No 394
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=81.26 E-value=15 Score=25.12 Aligned_cols=61 Identities=23% Similarity=0.229 Sum_probs=41.6
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCc-c-----eeec-cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHT-N-----TIVG-QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~-~-----~i~~-~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
+|+ +.+++.+|.++.+|.++|+.+....... . ++.. ..+..++.|+.+..-|..++...-.
T Consensus 111 ~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~ 178 (370)
T COG1520 111 DGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWT 178 (370)
T ss_pred CCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEE
Confidence 665 7788889999999998888877665443 1 1111 3344444788888888887777544
No 395
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=80.52 E-value=5.6 Score=21.92 Aligned_cols=27 Identities=15% Similarity=0.141 Sum_probs=16.1
Q ss_pred EEEEEccCCCEEEEEe-CCCcEEEEeCC
Q psy12376 8 FLLQTSQVGQVLAIGT-ARGNLTVYNHM 34 (89)
Q Consensus 8 ~~~~~spdg~~la~g~-~~g~v~iwd~~ 34 (89)
..+..+|++++|..++ ..+.|.+|+..
T Consensus 57 NGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 57 NGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred ceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 4567777776654443 35567666643
No 396
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=80.48 E-value=4.2 Score=30.26 Aligned_cols=35 Identities=11% Similarity=0.073 Sum_probs=25.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCC-CcEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTAR-GNLTVYNHMTS 36 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~-g~v~iwd~~~~ 36 (89)
+..+-|-|.+|.+||+.|+.+-.+ =.-++||-...
T Consensus 153 ~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 153 KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 345568999999999977665444 38899997543
No 397
>KOG3616|consensus
Probab=80.28 E-value=6 Score=30.77 Aligned_cols=62 Identities=13% Similarity=0.265 Sum_probs=41.3
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCe--EeeEecCCccee-ec-cEEEEEeCCCCEEEEeC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSK--RVPVLGKHTNTI-VG-QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~--~~~~~~~h~~~i-~~-~~las~s~d~~v~iwd~ 68 (89)
+++++-+|-|+-++++..||++++|+-...+ .+.........+ .. .=|+++..|.-+.-|.-
T Consensus 17 ~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnhgl~~~tsdrr~la~~~ 82 (1636)
T KOG3616|consen 17 TTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNHGLVTATSDRRALAWKE 82 (1636)
T ss_pred eeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeeccceEEEeccchhheeec
Confidence 6788999999999999999999999953322 233322222211 11 23666777777778874
No 398
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=79.52 E-value=4.6 Score=20.40 Aligned_cols=20 Identities=15% Similarity=0.283 Sum_probs=16.7
Q ss_pred CcEEEEEEccCCCEEEEEeC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTA 24 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~ 24 (89)
+...+++.-|||+.|++|..
T Consensus 1 d~~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 1 DRAYAVAVQSDGKILVAGYV 20 (55)
T ss_pred CceEEEEECCCCcEEEEEEe
Confidence 35688999999999999864
No 399
>PRK13616 lipoprotein LpqB; Provisional
Probab=78.79 E-value=3.6 Score=30.39 Aligned_cols=26 Identities=27% Similarity=0.084 Sum_probs=21.1
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTV 30 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~i 30 (89)
...|..++|||||..+|.-. +|.|++
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 34699999999999888766 477777
No 400
>KOG1920|consensus
Probab=78.49 E-value=5.1 Score=32.05 Aligned_cols=29 Identities=24% Similarity=0.088 Sum_probs=25.2
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNH 33 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~ 33 (89)
..|.+++||||++.+|..+..+++.+...
T Consensus 110 ~GI~aaswS~Dee~l~liT~~~tll~mT~ 138 (1265)
T KOG1920|consen 110 NGISAASWSPDEELLALITGRQTLLFMTK 138 (1265)
T ss_pred CceEEEeecCCCcEEEEEeCCcEEEEEec
Confidence 46999999999999999999888887653
No 401
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=78.36 E-value=16 Score=24.53 Aligned_cols=53 Identities=19% Similarity=0.240 Sum_probs=31.8
Q ss_pred CCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEe------CCCCEEEEeCCCCEEEee
Q psy12376 24 ARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGT------ARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 24 ~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s------~d~~v~iwd~~~~~~~~~ 76 (89)
....|++||..+.+-...-.+=.+.|.+ ++++.|. ....+..||..+......
T Consensus 14 ~C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~ 79 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSL 79 (281)
T ss_pred CCCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeec
Confidence 4568999998776543322222334443 4455553 577889999977665443
No 402
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=77.34 E-value=9 Score=26.01 Aligned_cols=30 Identities=13% Similarity=0.091 Sum_probs=24.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK 37 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~ 37 (89)
..+.|+|.|||.+|++ ...|.|.+++ ..+.
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~ 32 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGS 32 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCc
Confidence 4689999999988776 4599999999 4444
No 403
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=77.28 E-value=9.5 Score=29.00 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=27.3
Q ss_pred CcEEEEEEccCC---CEEEEEeCCCcEEEEeCCCC
Q psy12376 5 YYIFLLQTSQVG---QVLAIGTARGNLTVYNHMTS 36 (89)
Q Consensus 5 ~~i~~~~~spdg---~~la~g~~~g~v~iwd~~~~ 36 (89)
..|..+.|+|.+ .+|++=+.|+.+++||+...
T Consensus 147 ~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 147 LEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred ceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 458899999974 79998899999999999753
No 404
>PRK02888 nitrous-oxide reductase; Validated
Probab=76.67 E-value=28 Score=26.31 Aligned_cols=47 Identities=13% Similarity=0.056 Sum_probs=28.1
Q ss_pred CCcEEEEeCCC----C-eEeeEec----CCcceeec---cEEEEEeCCCCEEEEeCCCC
Q psy12376 25 RGNLTVYNHMT----S-KRVPVLG----KHTNTIVG---QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 25 ~g~v~iwd~~~----~-~~~~~~~----~h~~~i~~---~~las~s~d~~v~iwd~~~~ 71 (89)
++.|.+.|.++ + +.+..+. .|.-.+.- ..++++..+.+|.|.|+...
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~ 353 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKL 353 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhh
Confidence 34577888776 2 3333332 23323322 45667777999999999753
No 405
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=75.45 E-value=27 Score=27.42 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=44.9
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEE----eCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEe
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVY----NHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iw----d~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd 67 (89)
+.|.++.|-+|...++++..+|.|.+. +..+.+ +...+.-...|.| .+||..+.+++|.+-+
T Consensus 76 ~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt 148 (928)
T PF04762_consen 76 DKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT 148 (928)
T ss_pred CcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe
Confidence 569999999999999999999999999 554432 2222222344555 7888888888887754
No 406
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=75.28 E-value=23 Score=25.39 Aligned_cols=71 Identities=14% Similarity=0.242 Sum_probs=33.4
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec-cEEEEEeCCCCEEEEeCCCCEEEeeeCC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG-QVLAIGTARGNLTVYNHMTSKRVPVLGK 79 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~-~~las~s~d~~v~iwd~~~~~~~~~l~~ 79 (89)
.....|++.++ +|+-..+.+|.++.--..+....++. ....|.. .+|+..+.+ .|.+||..+++.+..+.-
T Consensus 71 g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~~~k~i~~~~~~~~If~G~LL~~~~~~-~i~~yDw~~~~~i~~i~v 144 (443)
T PF04053_consen 71 GLSFVWSSRNR-YAVLESSSTIKIYKNFKNEVVKSIKLPFSVEKIFGGNLLGVKSSD-FICFYDWETGKLIRRIDV 144 (443)
T ss_dssp -SEEEE-TSSE-EEEE-TTS-EEEEETTEE-TT-----SS-EEEEE-SSSEEEEETT-EEEEE-TTT--EEEEESS
T ss_pred eeEEEEecCcc-EEEEECCCeEEEEEcCccccceEEcCCcccceEEcCcEEEEECCC-CEEEEEhhHcceeeEEec
Confidence 44677888554 55555677888863222222112221 1223333 455555444 799999988887776653
No 407
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=74.79 E-value=28 Score=24.79 Aligned_cols=63 Identities=14% Similarity=0.198 Sum_probs=35.3
Q ss_pred EEEEccCCCEEEEEeCC-C--cEEEEeCCCCeEeeEecCC----cceeec---cEEEEEeC-CCC--EEEEeCCCCE
Q psy12376 9 LLQTSQVGQVLAIGTAR-G--NLTVYNHMTSKRVPVLGKH----TNTIVG---QVLAIGTA-RGN--LTVYNHMTSK 72 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~-g--~v~iwd~~~~~~~~~~~~h----~~~i~~---~~las~s~-d~~--v~iwd~~~~~ 72 (89)
.=.|+|||+.++-.++. | .|.+++...+.. ..+... ..+... ++|+..+. +|. |.+.|+.++.
T Consensus 286 ~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 286 SPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred CccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 34799999988876664 4 566777665543 333211 112222 55555553 333 7777775544
No 408
>KOG2377|consensus
Probab=74.05 E-value=9.2 Score=27.98 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=28.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNH 33 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~ 33 (89)
..+++|.++.||||.+.||.--.+.+|.+++-
T Consensus 64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf 95 (657)
T KOG2377|consen 64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNF 95 (657)
T ss_pred cCCCceeEEEeccCcceEEEEecCceEEEEec
Confidence 34568999999999999999999999999986
No 409
>KOG3630|consensus
Probab=73.82 E-value=6.6 Score=31.54 Aligned_cols=32 Identities=22% Similarity=0.151 Sum_probs=27.8
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~ 35 (89)
....++++|+|-|+++++|-..|++.-|...-
T Consensus 198 t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l 229 (1405)
T KOG3630|consen 198 TNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL 229 (1405)
T ss_pred ccceeeEEeccccceeeEecCCCeEEEeeccc
Confidence 34589999999999999999999999987643
No 410
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=73.43 E-value=6.5 Score=16.93 Aligned_cols=24 Identities=21% Similarity=0.367 Sum_probs=17.4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVY 31 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iw 31 (89)
.|.+++-++ .++++++..+-+++|
T Consensus 3 ~i~aia~g~--~~vavaTS~~~lRif 26 (27)
T PF12341_consen 3 EIEAIAAGD--SWVAVATSAGYLRIF 26 (27)
T ss_pred eEEEEEccC--CEEEEEeCCCeEEec
Confidence 466777665 478888888888776
No 411
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=73.27 E-value=20 Score=26.96 Aligned_cols=62 Identities=11% Similarity=-0.009 Sum_probs=41.2
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCC-C-eEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 8 FLLQTSQVGQVLAIGTARGNLTVYNHMT-S-KRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v~iwd~~~-~-~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
..+-|+|....|++=+....-.+++.+. + +....+ .-.+.|.| +++++.+..=.-+|||-..
T Consensus 116 QGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 116 QGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CcccccCCCceEEEEecCceeEeeeeeeCCceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 4678999988888777665556666643 3 333334 34567776 5666667777889999754
No 412
>KOG1920|consensus
Probab=71.88 E-value=39 Score=27.50 Aligned_cols=60 Identities=23% Similarity=0.231 Sum_probs=43.1
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTV 65 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~i 65 (89)
+.|.++.|..+++.++.++..|.|.+-|..+... -..+.-...|.+ ..++-.+.++++.+
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-eivg~vd~GI~aaswS~Dee~l~liT~~~tll~ 135 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLEL-EIVGNVDNGISAASWSPDEELLALITGRQTLLF 135 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccce-eeeeeccCceEEEeecCCCcEEEEEeCCcEEEE
Confidence 5799999999999999999999999998877532 222222233433 66777777777765
No 413
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=71.78 E-value=27 Score=26.65 Aligned_cols=28 Identities=18% Similarity=0.134 Sum_probs=24.9
Q ss_pred cEEEEEEcc-CCCEEEEEeCCCcEEEEeC
Q psy12376 6 YIFLLQTSQ-VGQVLAIGTARGNLTVYNH 33 (89)
Q Consensus 6 ~i~~~~~sp-dg~~la~g~~~g~v~iwd~ 33 (89)
+...++|+| +...||+-...|...||++
T Consensus 147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 147 PHADVAFNPWDQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred ccceEEeccCccceEEEEeccCcEEEEEe
Confidence 467899999 4569999999999999999
No 414
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=71.52 E-value=11 Score=24.63 Aligned_cols=28 Identities=25% Similarity=0.215 Sum_probs=21.4
Q ss_pred cEEEEEEccCCCEEEEEe---CCCcEEEEeC
Q psy12376 6 YIFLLQTSQVGQVLAIGT---ARGNLTVYNH 33 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~---~~g~v~iwd~ 33 (89)
.|+.+++||||..+|.-. .++.|.+--+
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V 143 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGGGRVYVAGV 143 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence 699999999999877655 3467777654
No 415
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=71.20 E-value=34 Score=24.24 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=31.5
Q ss_pred EEEccCCCEEEEEeC-CC--cEEEEeCCCCeEeeEecCCc-----ceeec---cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 10 LQTSQVGQVLAIGTA-RG--NLTVYNHMTSKRVPVLGKHT-----NTIVG---QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 10 ~~~spdg~~la~g~~-~g--~v~iwd~~~~~~~~~~~~h~-----~~i~~---~~las~s~d~~v~iwd~~~~~~~ 74 (89)
=+|.+||+.|+-+++ +| .+.+.|+.+++ +.+++... +.+.+ +.++..-.+..|+--|+++.+..
T Consensus 41 ~~ft~dG~kllF~s~~dg~~nly~lDL~t~~-i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~ 115 (386)
T PF14583_consen 41 NCFTDDGRKLLFASDFDGNRNLYLLDLATGE-ITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEER 115 (386)
T ss_dssp --B-TTS-EEEEEE-TTSS-EEEEEETTT-E-EEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EE
T ss_pred CCcCCCCCEEEEEeccCCCcceEEEEcccCE-EEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEE
Confidence 378999976555444 55 67777788875 44454322 12222 55555555567777788776543
No 416
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=71.04 E-value=30 Score=23.59 Aligned_cols=60 Identities=22% Similarity=0.182 Sum_probs=39.9
Q ss_pred EEEEEeCCCcEEEEeCCCCeEeeEecCC------cceeec--cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 18 VLAIGTARGNLTVYNHMTSKRVPVLGKH------TNTIVG--QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 18 ~la~g~~~g~v~iwd~~~~~~~~~~~~h------~~~i~~--~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.+..++.+|.+.-+|..+++.+.....- ..++.. ..+..++.++.++..|.++|+..-..
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~ 137 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSR 137 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEE
Confidence 4444578888999999988765432211 112211 66888889999999998777766543
No 417
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=69.95 E-value=34 Score=23.71 Aligned_cols=68 Identities=15% Similarity=0.200 Sum_probs=46.4
Q ss_pred EEEEEEccCCCEEEEEeC---CCcEEEEeCCCCeEeeEecCCcce--e-ec----cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 7 IFLLQTSQVGQVLAIGTA---RGNLTVYNHMTSKRVPVLGKHTNT--I-VG----QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~---~g~v~iwd~~~~~~~~~~~~h~~~--i-~~----~~las~s~d~~v~iwd~~~~~~~ 74 (89)
...++++|+++++..+.. ++.+.+.|..+++.......-..+ + .. ..+++-+.++.|.+.|.......
T Consensus 118 P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~ 195 (381)
T COG3391 118 PVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV 195 (381)
T ss_pred CceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence 457899999987766555 689999999888776654321122 1 11 35555578999999997665544
No 418
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=69.51 E-value=35 Score=23.66 Aligned_cols=28 Identities=21% Similarity=0.210 Sum_probs=25.3
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHM 34 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~ 34 (89)
-+.|+++|.+.+-++....+...+||..
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~ 52 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGN 52 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCC
Confidence 4789999999998998899999999986
No 419
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=68.03 E-value=36 Score=23.30 Aligned_cols=75 Identities=17% Similarity=0.148 Sum_probs=48.3
Q ss_pred cCCcEEEEEEcc-CCCEEEEEeCCC-cEEEEeCCCCeEeeEecC--------Ccceeec-cEEEEEeC-----CCCEEEE
Q psy12376 3 LRYYIFLLQTSQ-VGQVLAIGTARG-NLTVYNHMTSKRVPVLGK--------HTNTIVG-QVLAIGTA-----RGNLTVY 66 (89)
Q Consensus 3 ~~~~i~~~~~sp-dg~~la~g~~~g-~v~iwd~~~~~~~~~~~~--------h~~~i~~-~~las~s~-----d~~v~iw 66 (89)
+++..=.++.+| ++..+|.+=--| -..+||.++++....+.. |.-.-.. ++|.+... .|.|-||
T Consensus 3 lP~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVy 82 (305)
T PF07433_consen 3 LPARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVY 82 (305)
T ss_pred CCccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEE
Confidence 444555788999 556677777777 678899999987665543 3211111 56665544 4689999
Q ss_pred eCC-CCEEEeee
Q psy12376 67 NHM-TSKRVPVL 77 (89)
Q Consensus 67 d~~-~~~~~~~l 77 (89)
|.. +-+++..+
T Consensus 83 d~~~~~~ri~E~ 94 (305)
T PF07433_consen 83 DAARGYRRIGEF 94 (305)
T ss_pred ECcCCcEEEeEe
Confidence 997 44555544
No 420
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=67.71 E-value=40 Score=23.72 Aligned_cols=59 Identities=20% Similarity=0.372 Sum_probs=37.9
Q ss_pred EEEccCCCEEEEEeCC----------C-cEEEEeCCCCeEeeEec-CCcceeec------cEEEEEeCCCCEEEEeCCC
Q psy12376 10 LQTSQVGQVLAIGTAR----------G-NLTVYNHMTSKRVPVLG-KHTNTIVG------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 10 ~~~spdg~~la~g~~~----------g-~v~iwd~~~~~~~~~~~-~h~~~i~~------~~las~s~d~~v~iwd~~~ 70 (89)
++.+|.|-.+|..-++ . .|.+|+.. |+.+..+. .+ +.|.+ ..|+.-..||.+++||+..
T Consensus 34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~s-G~ll~~i~w~~-~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G 110 (410)
T PF04841_consen 34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSS-GKLLSSIPWDS-GRIVGMGWTDDEELVVVQSDGTVRVYDLFG 110 (410)
T ss_pred EEEcCCCceEEEEecCcccccccCCCCcEEEEECCC-CCEeEEEEECC-CCEEEEEECCCCeEEEEEcCCEEEEEeCCC
Confidence 4566666666665444 1 48888765 44555432 23 44544 5677778999999999963
No 421
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=67.62 E-value=25 Score=21.23 Aligned_cols=71 Identities=14% Similarity=0.098 Sum_probs=40.6
Q ss_pred CCcEEEEEEcc-----CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec----------cEEEEEeCCCCEEEEeC
Q psy12376 4 RYYIFLLQTSQ-----VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG----------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 4 ~~~i~~~~~sp-----dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~----------~~las~s~d~~v~iwd~ 68 (89)
...|++++-.+ +...|+.|+.. .+..||+..+..+..- .-.+.+++ .-++..+.+-.|.-+|.
T Consensus 47 n~~italaaG~l~~~~~~D~LliGt~t-~llaYDV~~N~d~Fyk-e~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~ 124 (136)
T PF14781_consen 47 NQEITALAAGRLKPDDGRDCLLIGTQT-SLLAYDVENNSDLFYK-EVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDY 124 (136)
T ss_pred CCceEEEEEEecCCCCCcCEEEEeccc-eEEEEEcccCchhhhh-hCccceeEEEEEecCCCCCcEEEECceEEEEEeCC
Confidence 44577775544 24588888754 8999999775432111 11122222 34555566777777777
Q ss_pred CCCEEEee
Q psy12376 69 MTSKRVPV 76 (89)
Q Consensus 69 ~~~~~~~~ 76 (89)
+..+...+
T Consensus 125 ~G~e~fWt 132 (136)
T PF14781_consen 125 EGNEIFWT 132 (136)
T ss_pred CCcEEEEE
Confidence 65555443
No 422
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=67.59 E-value=34 Score=22.81 Aligned_cols=71 Identities=14% Similarity=0.146 Sum_probs=42.0
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe-EeeEec-CCcceeec-----cEEEEEeCCCCEEEEeCC-CCEEEe
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK-RVPVLG-KHTNTIVG-----QVLAIGTARGNLTVYNHM-TSKRVP 75 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~-~~~~~~-~h~~~i~~-----~~las~s~d~~v~iwd~~-~~~~~~ 75 (89)
+++|++++-- .| +|+++. .+.|.+|+....+ ....-. .....+.+ ++++.|.....+.++..+ .+....
T Consensus 88 ~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~ 164 (321)
T PF03178_consen 88 KGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNKLI 164 (321)
T ss_dssp SS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-EE
T ss_pred cCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEccCCEEE
Confidence 4567777655 33 455554 4799999987766 433221 11123333 899999999999988553 344344
Q ss_pred ee
Q psy12376 76 VL 77 (89)
Q Consensus 76 ~l 77 (89)
.+
T Consensus 165 ~v 166 (321)
T PF03178_consen 165 LV 166 (321)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 423
>KOG1832|consensus
Probab=66.58 E-value=9.9 Score=30.15 Aligned_cols=44 Identities=16% Similarity=0.278 Sum_probs=34.1
Q ss_pred EecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCCCC
Q psy12376 41 VLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLGKHTKSK 84 (89)
Q Consensus 41 ~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~~h~~~~ 84 (89)
.+..|+...+| ++|+.|+..|.|+++|+.+|.-......|...+
T Consensus 1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~Sav 1146 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAV 1146 (1516)
T ss_pred hhhccccceeeEEeecCCceEEeeeccceEEEEEccCcccccccccccccc
Confidence 34445555454 899999999999999999998877777777553
No 424
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=65.53 E-value=18 Score=23.77 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=23.3
Q ss_pred cEEEEEEccC-CCEEEEEeCCCcEEEEeCCCCeEeeE
Q psy12376 6 YIFLLQTSQV-GQVLAIGTARGNLTVYNHMTSKRVPV 41 (89)
Q Consensus 6 ~i~~~~~spd-g~~la~g~~~g~v~iwd~~~~~~~~~ 41 (89)
.+++++++|. |++++.+..+..+..+| .+|+.+..
T Consensus 172 d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~ 207 (248)
T PF06977_consen 172 DLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSS 207 (248)
T ss_dssp ---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEE
T ss_pred cccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEE
Confidence 3789999994 67888888899999999 56765443
No 425
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=65.04 E-value=1.2 Score=18.50 Aligned_cols=8 Identities=25% Similarity=0.285 Sum_probs=6.0
Q ss_pred EEccCCCE
Q psy12376 11 QTSQVGQV 18 (89)
Q Consensus 11 ~~spdg~~ 18 (89)
.|||+|+.
T Consensus 7 ~FSp~Grl 14 (23)
T PF10584_consen 7 TFSPDGRL 14 (23)
T ss_dssp SBBTTSSB
T ss_pred eECCCCeE
Confidence 48899874
No 426
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=64.45 E-value=19 Score=25.95 Aligned_cols=31 Identities=19% Similarity=0.091 Sum_probs=24.9
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTS 36 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~ 36 (89)
..+.|+|.|||.+|++--..|.|++++..++
T Consensus 31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~ 61 (454)
T TIGR03606 31 KPWALLWGPDNQLWVTERATGKILRVNPETG 61 (454)
T ss_pred CceEEEEcCCCeEEEEEecCCEEEEEeCCCC
Confidence 4688999999988877655799999986554
No 427
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=63.05 E-value=26 Score=27.55 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=23.9
Q ss_pred cCCcEEEEEEccCCCEEEE-EeCC-----CcEEEEeCCC
Q psy12376 3 LRYYIFLLQTSQVGQVLAI-GTAR-----GNLTVYNHMT 35 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~-g~~~-----g~v~iwd~~~ 35 (89)
...++.+=+|||||++||- .+-. ..|++-|+++
T Consensus 348 ~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t 386 (912)
T TIGR02171 348 DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNA 386 (912)
T ss_pred CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhc
Confidence 3456777899999999987 2222 2588888865
No 428
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=62.90 E-value=44 Score=22.43 Aligned_cols=61 Identities=16% Similarity=0.184 Sum_probs=39.4
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEeeEec--CCcceeec--cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 17 QVLAIGTARGNLTVYNHMTSKRVPVLG--KHTNTIVG--QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~~~~~~~~~~~--~h~~~i~~--~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+.......++...+||..+.+.+..+. +..-.+.. +.|........++++|..+-+....+
T Consensus 101 ~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~EGWGLt~dg~~Li~SDGS~~L~~~dP~~f~~~~~i 165 (264)
T PF05096_consen 101 KLYQLTWKEGTGFVYDPNTLKKIGTFPYPGEGWGLTSDGKRLIMSDGSSRLYFLDPETFKEVRTI 165 (264)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEEE-SSS--EEEECSSCEEEE-SSSEEEEE-TTT-SEEEEE
T ss_pred EEEEEEecCCeEEEEccccceEEEEEecCCcceEEEcCCCEEEEECCccceEEECCcccceEEEE
Confidence 455666789999999999988877664 33334444 55555566677999998876655544
No 429
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=61.69 E-value=15 Score=16.78 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=18.4
Q ss_pred CcEEEEEEccCCCEEEEEeCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARG 26 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g 26 (89)
+....++..++|+..++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 4578899999999989988776
No 430
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=60.61 E-value=72 Score=24.19 Aligned_cols=62 Identities=13% Similarity=0.186 Sum_probs=39.5
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec-CCcceeec---------cEEEEEeCCCCEEEEeC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG-KHTNTIVG---------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~-~h~~~i~~---------~~las~s~d~~v~iwd~ 68 (89)
++.+.-|.-++.-++......+.|||.+.+....... ...+.|.+ +.+.+.|-.+.|.+|.-
T Consensus 32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q 103 (631)
T PF12234_consen 32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ 103 (631)
T ss_pred cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence 3445555555555555555699999998876322211 23456655 56667778888988865
No 431
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=60.52 E-value=19 Score=24.50 Aligned_cols=24 Identities=8% Similarity=0.044 Sum_probs=17.6
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLT 29 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~ 29 (89)
.+..+++.|||...++...+|.|.
T Consensus 307 r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 307 RPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp -EEEEEEETTSEEEEEE-TTTTEE
T ss_pred CceEEEEcCCCeEEEEECCCCeEe
Confidence 578888999988777777777764
No 432
>KOG4460|consensus
Probab=60.35 E-value=31 Score=25.80 Aligned_cols=33 Identities=9% Similarity=0.078 Sum_probs=26.2
Q ss_pred EEEEEEccCC---CEEEEEeCCCcEEEEeCCCCeEe
Q psy12376 7 IFLLQTSQVG---QVLAIGTARGNLTVYNHMTSKRV 39 (89)
Q Consensus 7 i~~~~~spdg---~~la~g~~~g~v~iwd~~~~~~~ 39 (89)
+.-++|+|+. .+|+.=+.|..+++||...-..+
T Consensus 168 l~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 168 LKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred eeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence 4567999986 58888888999999998764443
No 433
>PHA02713 hypothetical protein; Provisional
Probab=59.89 E-value=67 Score=23.60 Aligned_cols=62 Identities=16% Similarity=0.243 Sum_probs=35.8
Q ss_pred cCCCEEEEEeCCC-----cEEEEeCCCCeEe--eEec----CCcceeec-cEEEEEeCCC--------------------
Q psy12376 14 QVGQVLAIGTARG-----NLTVYNHMTSKRV--PVLG----KHTNTIVG-QVLAIGTARG-------------------- 61 (89)
Q Consensus 14 pdg~~la~g~~~g-----~v~iwd~~~~~~~--~~~~----~h~~~i~~-~~las~s~d~-------------------- 61 (89)
-+|+..++|+.++ .+..||..+++-. ..+. .|...+.. ++.+.||.++
T Consensus 350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~ 429 (557)
T PHA02713 350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTH 429 (557)
T ss_pred ECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCCccccccccccccccccccccc
Confidence 3567777777654 4788998765421 1111 11111111 6777777653
Q ss_pred ---CEEEEeCCCCEEEe
Q psy12376 62 ---NLTVYNHMTSKRVP 75 (89)
Q Consensus 62 ---~v~iwd~~~~~~~~ 75 (89)
++..||.++++...
T Consensus 430 ~~~~ve~YDP~td~W~~ 446 (557)
T PHA02713 430 SSNKVIRYDTVNNIWET 446 (557)
T ss_pred ccceEEEECCCCCeEee
Confidence 58889998776543
No 434
>KOG1916|consensus
Probab=59.37 E-value=8.7 Score=30.33 Aligned_cols=65 Identities=18% Similarity=0.282 Sum_probs=41.4
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------------------cEEEEEeCCCCEEEEeCC-
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------------------QVLAIGTARGNLTVYNHM- 69 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------------------~~las~s~d~~v~iwd~~- 69 (89)
.+-|-++.-++.++.+++++++.+...... ..+.+|..++.. +.||.+..||.+.+|.+-
T Consensus 188 wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi 266 (1283)
T KOG1916|consen 188 WCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYI 266 (1283)
T ss_pred ecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeee
Confidence 334444566888899999988877654322 334557665543 677777777777777763
Q ss_pred CCEEE
Q psy12376 70 TSKRV 74 (89)
Q Consensus 70 ~~~~~ 74 (89)
+|+..
T Consensus 267 ~g~~~ 271 (1283)
T KOG1916|consen 267 TGKIV 271 (1283)
T ss_pred ecccc
Confidence 44443
No 435
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=59.10 E-value=10 Score=19.01 Aligned_cols=29 Identities=7% Similarity=0.053 Sum_probs=13.6
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHM 34 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~ 34 (89)
+|.++.-+|-.-+.-.-..+|.+...+..
T Consensus 13 ~v~~v~~spi~GlyeV~~~~~~i~Y~~~d 41 (57)
T PF10411_consen 13 KVESVSPSPIPGLYEVVLKGGGILYVDED 41 (57)
T ss_dssp TCEEEEE-SSTTEEEEEE-TTEEEEEETT
T ss_pred ceeEEEcCCCCCeEEEEECCCeEEEEcCC
Confidence 46777777733232222245555555543
No 436
>KOG2467|consensus
Probab=58.68 E-value=8.6 Score=27.31 Aligned_cols=19 Identities=16% Similarity=0.193 Sum_probs=17.3
Q ss_pred cEEEEEeCCCCEEEEeCCC
Q psy12376 52 QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 52 ~~las~s~d~~v~iwd~~~ 70 (89)
-.|++|+.|+.+.+||++.
T Consensus 342 y~lvtgGTDnHlvLvDLr~ 360 (477)
T KOG2467|consen 342 YKLVTGGTDNHLVLVDLRP 360 (477)
T ss_pred ceEecCCccceEEEEeccc
Confidence 4799999999999999974
No 437
>KOG4441|consensus
Probab=58.46 E-value=41 Score=24.90 Aligned_cols=59 Identities=19% Similarity=0.393 Sum_probs=36.7
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCeEeeEecCCc-----ceee--c-cEEEEEeCCC-----CEEEEeCCCCEEE
Q psy12376 15 VGQVLAIGTAR------GNLTVYNHMTSKRVPVLGKHT-----NTIV--G-QVLAIGTARG-----NLTVYNHMTSKRV 74 (89)
Q Consensus 15 dg~~la~g~~~------g~v~iwd~~~~~~~~~~~~h~-----~~i~--~-~~las~s~d~-----~v~iwd~~~~~~~ 74 (89)
+|...++|+.+ ..+.+||.++++-.. +.... -.+. . .+.|.||.|| ++..||..+++..
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~-~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~ 409 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP-VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWT 409 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceec-cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCccc
Confidence 45677888877 367788887765322 21111 1111 1 7889999997 5777888766543
No 438
>PHA02790 Kelch-like protein; Provisional
Probab=56.90 E-value=58 Score=23.34 Aligned_cols=57 Identities=21% Similarity=0.195 Sum_probs=31.1
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCeEe--eEecC----Ccceeec-cEEEEEeCC-----CCEEEEeCCCCEE
Q psy12376 14 QVGQVLAIGTARGNLTVYNHMTSKRV--PVLGK----HTNTIVG-QVLAIGTAR-----GNLTVYNHMTSKR 73 (89)
Q Consensus 14 pdg~~la~g~~~g~v~iwd~~~~~~~--~~~~~----h~~~i~~-~~las~s~d-----~~v~iwd~~~~~~ 73 (89)
.+|+..+.| |.+.+||..+++-. ..+.. +...+.. ++.+.||.+ .++..||..+++.
T Consensus 406 ~~~~IYv~G---G~~e~ydp~~~~W~~~~~m~~~r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~~W 474 (480)
T PHA02790 406 FGRRLFLVG---RNAEFYCESSNTWTLIDDPIYPRDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTYSW 474 (480)
T ss_pred ECCEEEEEC---CceEEecCCCCcEeEcCCCCCCccccEEEEECCEEEEECCcCCCcccceEEEEECCCCeE
Confidence 345555555 45677887765432 11110 1011111 777877754 4688899887665
No 439
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=56.43 E-value=11 Score=22.22 Aligned_cols=22 Identities=14% Similarity=0.022 Sum_probs=17.2
Q ss_pred EEccCCCEEEEEeCCCcEEEEe
Q psy12376 11 QTSQVGQVLAIGTARGNLTVYN 32 (89)
Q Consensus 11 ~~spdg~~la~g~~~g~v~iwd 32 (89)
.|||||++|--..+|..+.=.|
T Consensus 74 vfSpDG~~lSFTYNDhVmhe~d 95 (122)
T PF12566_consen 74 VFSPDGSWLSFTYNDHVMHELD 95 (122)
T ss_pred EECCCCCEEEEEecchhhcccc
Confidence 6999999988888887766554
No 440
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=56.13 E-value=27 Score=25.30 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=19.5
Q ss_pred EEEEEEccCCCEEEEEe-CCCcEEEEeCCC
Q psy12376 7 IFLLQTSQVGQVLAIGT-ARGNLTVYNHMT 35 (89)
Q Consensus 7 i~~~~~spdg~~la~g~-~~g~v~iwd~~~ 35 (89)
|+.+..|.|.++|..++ ..|.++.||+..
T Consensus 314 itDI~iSlDDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 314 ITDILISLDDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp ---EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred eEeEEEccCCCEEEEEcccCCcEEEEecCC
Confidence 78999999999886555 499999999976
No 441
>PF02870 Methyltransf_1N: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; InterPro: IPR008332 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources []. This group of proteins are characterised by having an N-terminal ribonuclease-like domain associated with 6-O-methylguanine DNA methyltransferase activity (IPR001497 from INTERPRO).; GO: 0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A.
Probab=55.63 E-value=13 Score=19.39 Aligned_cols=27 Identities=15% Similarity=0.123 Sum_probs=20.1
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCC
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~ 35 (89)
..-=||-|..+++++..|...|+=...
T Consensus 5 ~~~~sPlG~l~l~a~e~gL~~i~f~~~ 31 (77)
T PF02870_consen 5 TTIDSPLGPLLLAASEKGLCGIDFEDQ 31 (77)
T ss_dssp EEEEETTEEEEEEEETTCEEEEEEEC-
T ss_pred EEecCCCeEEEEEEECCeEEEEEECCC
Confidence 344578999999999999777775433
No 442
>KOG1008|consensus
Probab=54.83 E-value=3.1 Score=31.29 Aligned_cols=61 Identities=8% Similarity=0.172 Sum_probs=41.5
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCC-eEeeEec--CCcceeec----cEEEEEeCCCCEEEEeC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTS-KRVPVLG--KHTNTIVG----QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~-~~~~~~~--~h~~~i~~----~~las~s~d~~v~iwd~ 68 (89)
..+++|-.|-+.+.+|.....+.++|.+.. ..+..+. .|++.... +|+++-. |+.+.+||.
T Consensus 157 qns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~ 224 (783)
T KOG1008|consen 157 QNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDT 224 (783)
T ss_pred ccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceeccc-cCceeeccc
Confidence 446778778888899998999999998842 1122221 23333222 7888765 999999993
No 443
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=54.76 E-value=70 Score=22.23 Aligned_cols=71 Identities=11% Similarity=0.163 Sum_probs=48.4
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec----------------cEEEEEeCCCCEEEEeCCC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG----------------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~----------------~~las~s~d~~v~iwd~~~ 70 (89)
|+...-.+++..=+.|..-|-|-+||.. |+.++.+. +.+++.+ .+|+-==-||+|..+|..+
T Consensus 203 VtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~a-s~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~s 280 (336)
T TIGR03118 203 VTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVA-SSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQS 280 (336)
T ss_pred EEEEecCCcccccccCCCcceEEEEcCC-CcEEEEec-cCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCC
Confidence 4455556666666677788899999975 66777663 2333333 4555555699999999988
Q ss_pred CEEEeeeCC
Q psy12376 71 SKRVPVLGK 79 (89)
Q Consensus 71 ~~~~~~l~~ 79 (89)
++.+-.|..
T Consensus 281 G~~~g~L~~ 289 (336)
T TIGR03118 281 GAQLGQLLD 289 (336)
T ss_pred CceeeeecC
Confidence 887666544
No 444
>KOG4441|consensus
Probab=53.90 E-value=82 Score=23.37 Aligned_cols=61 Identities=15% Similarity=0.380 Sum_probs=37.3
Q ss_pred CCCEEEEEeCCC------cEEEEeCCCCeEeeE--ecC---Ccce-eec-cEEEEEeCC------CCEEEEeCCCCEEEe
Q psy12376 15 VGQVLAIGTARG------NLTVYNHMTSKRVPV--LGK---HTNT-IVG-QVLAIGTAR------GNLTVYNHMTSKRVP 75 (89)
Q Consensus 15 dg~~la~g~~~g------~v~iwd~~~~~~~~~--~~~---h~~~-i~~-~~las~s~d------~~v~iwd~~~~~~~~ 75 (89)
.+..++.|+.++ .+..||..+++.... +.. +.+. +.- .+.++||.| .++..||.+.++...
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~ 363 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP 363 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceec
Confidence 345667776663 677888877643222 211 1111 111 689999999 478899998777554
No 445
>KOG1898|consensus
Probab=53.44 E-value=1.2e+02 Score=24.66 Aligned_cols=60 Identities=10% Similarity=0.214 Sum_probs=38.6
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEeeEecCC---cceeec-------------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 16 GQVLAIGTARGNLTVYNHMTSKRVPVLGKH---TNTIVG-------------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 16 g~~la~g~~~g~v~iwd~~~~~~~~~~~~h---~~~i~~-------------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
...++.+..+|.+..+.+..+..+..+..| +.-+.| ++++.|+.|+++++..+.....+.
T Consensus 549 r~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~d~l~ 624 (1205)
T KOG1898|consen 549 RRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPSDCLQ 624 (1205)
T ss_pred ceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEecCcceEE
Confidence 356777777888877777543334444321 122223 789999999999999997444433
No 446
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=52.66 E-value=69 Score=21.52 Aligned_cols=71 Identities=17% Similarity=0.119 Sum_probs=50.7
Q ss_pred EEEEEEccCCCEEEEEeCCC--cEEEEeCCCCeEeeEec--CC--cceeec---cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 7 IFLLQTSQVGQVLAIGTARG--NLTVYNHMTSKRVPVLG--KH--TNTIVG---QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g--~v~iwd~~~~~~~~~~~--~h--~~~i~~---~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
...+.|..+|.++-+.+.-| .|+.+|..+|+...... .. ...|.- ++..-.-.++...+||..+-+.+..+
T Consensus 47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~~ 126 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGTF 126 (264)
T ss_dssp EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceEEEEE
Confidence 45788888888877777777 89999999998754432 11 112222 67777789999999999887776654
No 447
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=51.80 E-value=29 Score=24.19 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=25.2
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~ 35 (89)
.|..+...+..+.|.+-+.+|.|.+|++..
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 399999999999999999999999999863
No 448
>KOG2280|consensus
Probab=49.86 E-value=74 Score=24.78 Aligned_cols=61 Identities=15% Similarity=0.102 Sum_probs=41.2
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec--CCcceeeccEEEEEeCCCCEEEEeC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG--KHTNTIVGQVLAIGTARGNLTVYNH 68 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~--~h~~~i~~~~las~s~d~~v~iwd~ 68 (89)
..+..+..||++.+||.=+.+|.+.+-++...+....+. .|.-+ ..++=+|+|.-+.+|+.
T Consensus 217 ~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p---~qm~WcgndaVvl~~e~ 279 (829)
T KOG2280|consen 217 SSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPP---KQMAWCGNDAVVLSWEV 279 (829)
T ss_pred ceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCch---HhceeecCCceEEEEee
Confidence 347889999999999999999999998887665544332 22111 34555555555555553
No 449
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=49.44 E-value=45 Score=25.54 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=32.2
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL 42 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~ 42 (89)
...|.+++....+.+++....||+|.++|..+-+.+...
T Consensus 259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~ 297 (753)
T PF11635_consen 259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNET 297 (753)
T ss_pred CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhccc
Confidence 456888888888889999999999999999887654433
No 450
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=49.07 E-value=41 Score=25.60 Aligned_cols=31 Identities=16% Similarity=0.357 Sum_probs=28.6
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNH 33 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~ 33 (89)
..+.+..+.|.++++.+++-..+|.|.+||.
T Consensus 128 l~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~ 158 (670)
T PF10395_consen 128 LDDKVVGIKFSSDGKIIYVVLENGSIQIYDF 158 (670)
T ss_pred cccceEEEEEecCCCEEEEEEcCCcEEEEec
Confidence 4567899999999999999999999999998
No 451
>COG4831 Roadblock/LC7 domain [Function unknown]
Probab=48.45 E-value=22 Score=20.22 Aligned_cols=19 Identities=11% Similarity=0.083 Sum_probs=13.6
Q ss_pred cCCcEEEEEEccCCCEEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAI 21 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~ 21 (89)
.+..+-.=.|||||+.++.
T Consensus 11 i~Gv~AAGefs~DGkLv~Y 29 (109)
T COG4831 11 IKGVMAAGEFSPDGKLVEY 29 (109)
T ss_pred ccceeEeceeCCCCceEEe
Confidence 4455666689999987765
No 452
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=47.26 E-value=85 Score=21.05 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=31.2
Q ss_pred CCCEEEEEeCCCcEEEEeCCC--CeEeeEecCCcceeec-------c-EEEEEeCCCCEEEEeCC
Q psy12376 15 VGQVLAIGTARGNLTVYNHMT--SKRVPVLGKHTNTIVG-------Q-VLAIGTARGNLTVYNHM 69 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~--~~~~~~~~~h~~~i~~-------~-~las~s~d~~v~iwd~~ 69 (89)
++++|+.|+++|...+. ... ++..+.+. ...|.+ + +++-++....++.+++.
T Consensus 12 ~~~~lL~GTe~Gly~~~-~~~~~~~~~kl~~--~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~ 73 (302)
T smart00036 12 DGKWLLVGTEEGLYVLN-ISDQPGTLEKLIG--RRSVTQIWVLEENNVLLMISGKKPQLYSHPLS 73 (302)
T ss_pred CCcEEEEEeCCceEEEE-cccCCCCeEEecC--cCceEEEEEEhhhCEEEEEeCCcceEEEEEHH
Confidence 34689999999877775 443 33333332 233333 4 44444555569999994
No 453
>KOG0088|consensus
Probab=46.98 E-value=28 Score=21.96 Aligned_cols=45 Identities=20% Similarity=0.412 Sum_probs=27.8
Q ss_pred EEEEEeCCCcEEEEeCCCCeEeeEecCCcceeeccEEEEEeCCCCEEEEeCCCC
Q psy12376 18 VLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVGQVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 18 ~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~~~las~s~d~~v~iwd~~~~ 71 (89)
.+-.+...-.+.|||....+..+.+. | +-.-+.||-+.+||+.+.
T Consensus 54 k~n~ed~ra~L~IWDTAGQErfHALG----P-----IYYRgSnGalLVyDITDr 98 (218)
T KOG0088|consen 54 KVNVEDCRADLHIWDTAGQERFHALG----P-----IYYRGSNGALLVYDITDR 98 (218)
T ss_pred ccccccceeeeeeeeccchHhhhccC----c-----eEEeCCCceEEEEeccch
Confidence 33344445578889987665544442 2 334567888999998543
No 454
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=46.57 E-value=63 Score=24.30 Aligned_cols=18 Identities=17% Similarity=0.606 Sum_probs=16.7
Q ss_pred cEEEEEeCCCCEEEEeCC
Q psy12376 52 QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 52 ~~las~s~d~~v~iwd~~ 69 (89)
.|+|.||..|.|++||--
T Consensus 574 GyIa~as~kGDirLyDRi 591 (776)
T COG5167 574 GYIAAASRKGDIRLYDRI 591 (776)
T ss_pred ceEEEecCCCceeeehhh
Confidence 899999999999999964
No 455
>PF15525 DUF4652: Domain of unknown function (DUF4652)
Probab=45.28 E-value=82 Score=20.26 Aligned_cols=56 Identities=16% Similarity=0.097 Sum_probs=32.8
Q ss_pred CcEEEEeCCCCeEeeEecC-C------cc--eeec-cE-------EEEEeCCCCEEEEeCCCCEEEeeeCCCC
Q psy12376 26 GNLTVYNHMTSKRVPVLGK-H------TN--TIVG-QV-------LAIGTARGNLTVYNHMTSKRVPVLGKHT 81 (89)
Q Consensus 26 g~v~iwd~~~~~~~~~~~~-h------~~--~i~~-~~-------las~s~d~~v~iwd~~~~~~~~~l~~h~ 81 (89)
|.|+|.|..+++.....-+ - +. ++.. .+ .-+-+.-|.|+++++.+++.......+.
T Consensus 88 GkIYIkn~~~~~~~~L~i~~~~~k~sPK~i~WiDD~~L~vIIG~a~GTvS~GGnLy~~nl~tg~~~~ly~~~d 160 (200)
T PF15525_consen 88 GKIYIKNLNNNNWWSLQIDQNEEKYSPKYIEWIDDNNLAVIIGYAHGTVSKGGNLYKYNLNTGNLTELYEWKD 160 (200)
T ss_pred eeEEEEecCCCceEEEEecCcccccCCceeEEecCCcEEEEEccccceEccCCeEEEEEccCCceeEeeeccc
Confidence 5788888877765432111 1 11 1112 22 2234677899999999888766555433
No 456
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=44.91 E-value=22 Score=23.73 Aligned_cols=8 Identities=13% Similarity=0.252 Sum_probs=4.0
Q ss_pred EEEeCCCCe
Q psy12376 29 TVYNHMTSK 37 (89)
Q Consensus 29 ~iwd~~~~~ 37 (89)
.+|+ +.|+
T Consensus 264 ~i~~-~~G~ 271 (286)
T PRK10526 264 EFYT-QDGV 271 (286)
T ss_pred EEEC-CCCC
Confidence 5665 3443
No 457
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=44.18 E-value=66 Score=21.42 Aligned_cols=30 Identities=17% Similarity=0.184 Sum_probs=24.1
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHM 34 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~ 34 (89)
..++++.|-+|++.++.++.+|.+.++...
T Consensus 173 ~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 173 RWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred ccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 358888888777899999999999998865
No 458
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=43.62 E-value=63 Score=24.31 Aligned_cols=53 Identities=13% Similarity=0.248 Sum_probs=29.9
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceee-----c-cEEEEEeCCCCEEEEeCC
Q psy12376 17 QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIV-----G-QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~-----~-~~las~s~d~~v~iwd~~ 69 (89)
-++|+++..|-|++||.-.-+....+.+-...|. + ...+.|.....+.+-|+.
T Consensus 574 GyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yllL~d~~ 632 (776)
T COG5167 574 GYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNYLLLTDVP 632 (776)
T ss_pred ceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecceEEEEecc
Confidence 3899999999999999543322233333333222 2 222223345567676664
No 459
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=43.44 E-value=39 Score=18.66 Aligned_cols=16 Identities=6% Similarity=-0.143 Sum_probs=10.8
Q ss_pred EEEEEEccCCCEEEEE
Q psy12376 7 IFLLQTSQVGQVLAIG 22 (89)
Q Consensus 7 i~~~~~spdg~~la~g 22 (89)
...++.|||+.+++.+
T Consensus 59 pNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 59 PNGVALSPDESFVLVA 74 (89)
T ss_dssp EEEEEE-TTSSEEEEE
T ss_pred cCeEEEcCCCCEEEEE
Confidence 4678899998866543
No 460
>smart00706 TECPR Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins.
Probab=43.39 E-value=32 Score=15.00 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=17.9
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVY 31 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iw 31 (89)
+..+..++.+|++...++.. +|.|+.+
T Consensus 7 ~g~l~~isvg~~~~vW~V~~-~g~i~~r 33 (35)
T smart00706 7 PGELVQVSVGPSDTVWAVNS-DGNIYRR 33 (35)
T ss_pred CCCEEEEEECCCCeEEEEcC-CCCEEEE
Confidence 34677888888756666654 6676654
No 461
>smart00415 HSF heat shock factor.
Probab=42.67 E-value=27 Score=19.63 Aligned_cols=14 Identities=21% Similarity=0.299 Sum_probs=10.7
Q ss_pred EEEEccCCCEEEEE
Q psy12376 9 LLQTSQVGQVLAIG 22 (89)
Q Consensus 9 ~~~~spdg~~la~g 22 (89)
.+.|+|+|+.+.+-
T Consensus 21 iI~W~~~G~~f~I~ 34 (105)
T smart00415 21 IISWSPSGKSFVIW 34 (105)
T ss_pred EEEECCCCCEEEEc
Confidence 58999999766653
No 462
>KOG1900|consensus
Probab=41.74 E-value=99 Score=25.55 Aligned_cols=62 Identities=13% Similarity=0.272 Sum_probs=40.9
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeC----CC---CeE-----------------eeEec-CCcceeec-------cE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNH----MT---SKR-----------------VPVLG-KHTNTIVG-------QV 53 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~----~~---~~~-----------------~~~~~-~h~~~i~~-------~~ 53 (89)
.|.|+...-+|+.|.+|-++ .+|.. .. ++. +..+. .+..+|.. +.
T Consensus 180 ~V~~I~~t~nGRIF~~G~dg---~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~I 256 (1311)
T KOG1900|consen 180 SVNCITYTENGRIFFAGRDG---NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNI 256 (1311)
T ss_pred eEEEEEeccCCcEEEeecCC---CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccce
Confidence 48899988899988887655 44442 22 111 11122 45556654 67
Q ss_pred EEEEeCCCCEEEEeCCC
Q psy12376 54 LAIGTARGNLTVYNHMT 70 (89)
Q Consensus 54 las~s~d~~v~iwd~~~ 70 (89)
+-+=++.++|.+||+..
T Consensus 257 lY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 257 LYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eeeeccCceEEEEEccC
Confidence 78889999999999965
No 463
>KOG1983|consensus
Probab=40.78 E-value=52 Score=26.20 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=27.7
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS 36 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~ 36 (89)
+.....++|+|....+|.|+.+|.|.++....-
T Consensus 35 ~~~~~~~afD~~q~llai~t~tg~i~~yg~~~v 67 (993)
T KOG1983|consen 35 PSTPSALAFDPTQGLLAIGTRTGAIKIYGQPGV 67 (993)
T ss_pred CCCCcceeeccccceEEEEEecccEEEecccce
Confidence 334567899999999999999999999976543
No 464
>KOG1983|consensus
Probab=40.76 E-value=88 Score=25.02 Aligned_cols=22 Identities=9% Similarity=0.131 Sum_probs=19.8
Q ss_pred cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 52 QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 52 ~~las~s~d~~v~iwd~~~~~~ 73 (89)
..++++-.|+++.+||+..++.
T Consensus 247 ~~~v~~h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 247 SHFVSYHTDGSYAFWDVSSGKL 268 (993)
T ss_pred ceEEEEEecCCEEeeecCCCce
Confidence 7899999999999999988765
No 465
>PF09142 TruB_C: tRNA Pseudouridine synthase II, C terminal; InterPro: IPR015225 Pseudouridine synthases catalyse the isomerisation of uridine to pseudouridine (Psi) in a variety of RNA molecules, and may function as RNA chaperones. Pseudouridine is the most abundant modified nucleotide found in all cellular RNAs. There are four distinct families of pseudouridine synthases that share no global sequence similarity, but which do share the same fold of their catalytic domain(s) and uracil-binding site and are descended from a common molecular ancestor. The catalytic domain consists of two subdomains, each of which has an alpha+beta structure that has some similarity to the ferredoxin-like fold (note: some pseudouridine synthases contain additional domains). The active site is the most conserved structural region of the superfamily and is located between the two homologous domains. These families are []: Pseudouridine synthase I, TruA. Pseudouridine synthase II, TruB, which contains and additional C-terminal PUA domain. Pseudouridine synthase RsuA (ribosomal small subunit) and RluC/RluD (ribosomal large subunits), both of which contain an additional N-terminal alpha-L RNA-binding motif. Pseudouridine synthase TruD, which has a natural circular permutation in the catalytic domain, as well as an insertion of a family-specific alpha+beta subdomain. TruB is responsible for the pseudouridine residue present in the T loops of virtually all tRNAs. TruB recognises the preformed 3-D structure of the T loop primarily through shape complementarity. It accesses its substrate uridyl residue by flipping out the nucleotide and disrupts the tertiary structure of tRNA []. The C-terminal domain adopts a secondary structure consisting of a four-stranded beta sheet and one alpha helix, similar to that found in PUA domains. It is predominantly involved in RNA-binding, being mostly found in tRNA pseudouridine synthase B (TruB) []. ; GO: 0003723 RNA binding, 0009982 pseudouridine synthase activity, 0001522 pseudouridine synthesis, 0009451 RNA modification; PDB: 1SGV_B.
Probab=39.75 E-value=34 Score=17.10 Aligned_cols=14 Identities=14% Similarity=0.209 Sum_probs=8.0
Q ss_pred EEEEccCCCEEEEE
Q psy12376 9 LLQTSQVGQVLAIG 22 (89)
Q Consensus 9 ~~~~spdg~~la~g 22 (89)
...+.|||+.+|..
T Consensus 29 ~aa~~pdG~lvAL~ 42 (56)
T PF09142_consen 29 VAAFAPDGRLVALL 42 (56)
T ss_dssp EEEE-TTS-EEEEE
T ss_pred EEEECCCCcEEEEE
Confidence 45677777777765
No 466
>PF09941 DUF2173: Uncharacterized conserved protein (DUF2173); InterPro: IPR018685 This family of various hypothetical prokaryotic proteins has no known function.
Probab=39.57 E-value=49 Score=19.11 Aligned_cols=21 Identities=19% Similarity=0.145 Sum_probs=16.2
Q ss_pred CCcCCcEEEEEEccCCCEEEE
Q psy12376 1 MNLRYYIFLLQTSQVGQVLAI 21 (89)
Q Consensus 1 ~~~~~~i~~~~~spdg~~la~ 21 (89)
|..++.+-...||++|+.+..
T Consensus 7 m~lpGv~AAg~Fs~~G~l~e~ 27 (108)
T PF09941_consen 7 MKLPGVVAAGEFSDDGKLVEY 27 (108)
T ss_pred hcCCCeEEEEEECCCCeEEee
Confidence 456777889999999987643
No 467
>COG5169 HSF1 Heat shock transcription factor [Transcription]
Probab=39.39 E-value=28 Score=23.57 Aligned_cols=13 Identities=38% Similarity=0.470 Sum_probs=10.5
Q ss_pred EEEEccCCCEEEE
Q psy12376 9 LLQTSQVGQVLAI 21 (89)
Q Consensus 9 ~~~~spdg~~la~ 21 (89)
.|.|+|||..|++
T Consensus 29 ~I~Ws~~G~sfvI 41 (282)
T COG5169 29 LIQWSPDGRSFVI 41 (282)
T ss_pred ceEECCCCCEEEE
Confidence 5899999987665
No 468
>KOG0084|consensus
Probab=38.66 E-value=16 Score=23.47 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=18.6
Q ss_pred cEEEEeCCCCeEeeEecCCcceeeccEEEEEeCCCCEEEEeCC
Q psy12376 27 NLTVYNHMTSKRVPVLGKHTNTIVGQVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 27 ~v~iwd~~~~~~~~~~~~h~~~i~~~~las~s~d~~v~iwd~~ 69 (89)
.+.|||+...+..+.+..+- .-+.+|-|.+||+.
T Consensus 59 KlQIWDTAGQERFrtit~sy---------YR~ahGii~vyDiT 92 (205)
T KOG0084|consen 59 KLQIWDTAGQERFRTITSSY---------YRGAHGIIFVYDIT 92 (205)
T ss_pred EEEeeeccccHHHhhhhHhh---------ccCCCeEEEEEEcc
Confidence 67778876655444332210 11456667777764
No 469
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=37.81 E-value=1.3e+02 Score=20.47 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=24.1
Q ss_pred EEEEccCCCEEEEEeCCC-cEEEEeCCCCeEeeEecCC
Q psy12376 9 LLQTSQVGQVLAIGTARG-NLTVYNHMTSKRVPVLGKH 45 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g-~v~iwd~~~~~~~~~~~~h 45 (89)
.++...+|.+-+++-.+| .|.+|+.. |+.+..+.-.
T Consensus 217 G~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP 253 (307)
T COG3386 217 GMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLP 253 (307)
T ss_pred ceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECC
Confidence 355666777665555554 89999987 7777665533
No 470
>KOG0080|consensus
Probab=37.68 E-value=27 Score=22.05 Aligned_cols=43 Identities=21% Similarity=0.349 Sum_probs=25.5
Q ss_pred EEEEEeCCCcEEEEeCCCCeEeeEecCCcceeeccEEEEEeCCCCEEEEeCC
Q psy12376 18 VLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVGQVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 18 ~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~~~las~s~d~~v~iwd~~ 69 (89)
.+.+...+-++.|||....+..+.+.+. |. -+..|-|.+||+.
T Consensus 52 ~m~vdg~~~KlaiWDTAGqErFRtLTpS-------yy--RgaqGiIlVYDVT 94 (209)
T KOG0080|consen 52 VMQVDGKRLKLAIWDTAGQERFRTLTPS-------YY--RGAQGIILVYDVT 94 (209)
T ss_pred EEEEcCceEEEEEEeccchHhhhccCHh-------Hh--ccCceeEEEEEcc
Confidence 4555556667888998877666665431 00 1344556666664
No 471
>PF05907 DUF866: Eukaryotic protein of unknown function (DUF866); InterPro: IPR008584 This family consists of a number of hypothetical eukaryotic proteins of unknown function with an average length of around 165 residues.; PDB: 1ZSO_B.
Probab=36.91 E-value=96 Score=19.07 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=15.1
Q ss_pred EEEEEEccCCCEEEEEeCCCcEE-EEeCCCC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLT-VYNHMTS 36 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~-iwd~~~~ 36 (89)
+.-+.|+|++.+.|.+...|++. =.|...+
T Consensus 105 ~e~~~f~p~~~~~~~~~esG~~f~~vdL~e~ 135 (161)
T PF05907_consen 105 LEPVEFSPRGGWVAVSVESGTKFEDVDLSEG 135 (161)
T ss_dssp EEEEEE---S-EEEEET-TS-EEEEE--TTS
T ss_pred cEeEEEecCCcEEEEEecCCCEEEeccCCCC
Confidence 45678888888888887677665 4455544
No 472
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=36.71 E-value=1.6e+02 Score=21.14 Aligned_cols=52 Identities=10% Similarity=0.194 Sum_probs=36.5
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec----cEEEEEeCCCCEEEEeC
Q psy12376 17 QVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG----QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~----~~las~s~d~~v~iwd~ 68 (89)
.+|.+-+-||.+.+|+-+.--..+.+.. ..+|+.- ..|++++.+..+..|..
T Consensus 146 ~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 146 DFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred eEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEecCceeEEEecH
Confidence 5889999999999999766433333333 2344432 77888888888888776
No 473
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=36.49 E-value=1.5e+02 Score=21.37 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=26.4
Q ss_pred EEEEEEccCCCEEEEEeC-CCcEEEEeCCCCeEeeEecCCc
Q psy12376 7 IFLLQTSQVGQVLAIGTA-RGNLTVYNHMTSKRVPVLGKHT 46 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~-~g~v~iwd~~~~~~~~~~~~h~ 46 (89)
+.++.+.+....|++++. ...|...|.++++....+..+.
T Consensus 273 ~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~ 313 (477)
T PF05935_consen 273 INSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPG 313 (477)
T ss_dssp EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-ST
T ss_pred cCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCC
Confidence 789999994444444454 5588899988998888877653
No 474
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=36.41 E-value=52 Score=15.44 Aligned_cols=21 Identities=10% Similarity=0.194 Sum_probs=15.3
Q ss_pred CCCEEEEEeCCCcEEEEeCCC
Q psy12376 15 VGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~ 35 (89)
.|.++..+..++.+.|.|+.+
T Consensus 10 ~g~yaYva~~~~Gl~IvDISn 30 (42)
T PF08309_consen 10 SGNYAYVADGNNGLVIVDISN 30 (42)
T ss_pred ECCEEEEEeCCCCEEEEECCC
Confidence 456776667777888888865
No 475
>PF15644 Tox-PL: Papain fold toxin 1; PDB: 3B21_A.
Probab=35.71 E-value=63 Score=18.26 Aligned_cols=22 Identities=14% Similarity=0.388 Sum_probs=15.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCe
Q psy12376 16 GQVLAIGTARGNLTVYNHMTSK 37 (89)
Q Consensus 16 g~~la~g~~~g~v~iwd~~~~~ 37 (89)
|..+.+-..+|.|.+||.++|+
T Consensus 88 gHa~nvv~~~G~i~~~D~Q~G~ 109 (111)
T PF15644_consen 88 GHAFNVVNQNGKIVFLDPQSGK 109 (111)
T ss_dssp TTEEEEEEE-SSEEEEBTTTTB
T ss_pred ceEEEEEeCCCeEEEEeCCCCC
Confidence 5555444788889999988875
No 476
>KOG2467|consensus
Probab=35.65 E-value=37 Score=24.30 Aligned_cols=21 Identities=19% Similarity=0.248 Sum_probs=18.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCC
Q psy12376 15 VGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~ 35 (89)
-|..|++|+.|..+.+||.+.
T Consensus 340 ~Gy~lvtgGTDnHlvLvDLr~ 360 (477)
T KOG2467|consen 340 RGYKLVTGGTDNHLVLVDLRP 360 (477)
T ss_pred cCceEecCCccceEEEEeccc
Confidence 367899999999999999975
No 477
>PF07865 DUF1652: Protein of unknown function (DUF1652); InterPro: IPR012448 The proteins in this entry have not been characterised.
Probab=34.91 E-value=74 Score=16.80 Aligned_cols=15 Identities=0% Similarity=0.175 Sum_probs=10.5
Q ss_pred cEEEEeCCCCeEeeE
Q psy12376 27 NLTVYNHMTSKRVPV 41 (89)
Q Consensus 27 ~v~iwd~~~~~~~~~ 41 (89)
+|+++|..+|+..-.
T Consensus 28 tvrl~d~~sg~~~l~ 42 (69)
T PF07865_consen 28 TVRLFDPASGRVELT 42 (69)
T ss_pred EEEEecCCCCcEEEE
Confidence 788888888776333
No 478
>PF08149 BING4CT: BING4CT (NUC141) domain; InterPro: IPR012952 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This C-terminal domain is found in the BING4 family of nucleolar WD40 repeat proteins [].
Probab=34.76 E-value=82 Score=17.23 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=25.7
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK 37 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~ 37 (89)
...|.+++|.|--..|.+|...|--.+.-.-.|+
T Consensus 9 ~~~v~~~~F~PfEDvLgvGh~~G~sSiiVPGsGe 42 (80)
T PF08149_consen 9 GSPVESLRFCPFEDVLGVGHSKGFSSIIVPGSGE 42 (80)
T ss_pred CCeeeeeEEechHHeeEeeccCceeEEeccCCCC
Confidence 3469999999988899999988855554444444
No 479
>PF00447 HSF_DNA-bind: HSF-type DNA-binding; InterPro: IPR000232 Heat shock factor (HSF) is a transcriptional activator of heat shock genes []: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs []. Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus []. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats []. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear []. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus []. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1FBQ_B 1FYL_B 1FBS_A 1FYM_B 3HTS_B 2HTS_A 3HSF_A 1FBU_B 1FYK_A 2LDU_A ....
Probab=34.66 E-value=32 Score=19.15 Aligned_cols=13 Identities=23% Similarity=0.371 Sum_probs=9.3
Q ss_pred EEEEccCCCEEEE
Q psy12376 9 LLQTSQVGQVLAI 21 (89)
Q Consensus 9 ~~~~spdg~~la~ 21 (89)
.|.|+++|..+++
T Consensus 18 ~I~W~~~G~~fiI 30 (103)
T PF00447_consen 18 IIRWSPDGDSFII 30 (103)
T ss_dssp TCEECTTSSEEEE
T ss_pred EEEEeCCCCEEEE
Confidence 4789998865544
No 480
>PF13964 Kelch_6: Kelch motif
Probab=34.50 E-value=56 Score=15.23 Aligned_cols=15 Identities=13% Similarity=0.202 Sum_probs=9.7
Q ss_pred CCEEEEeCCCCEEEe
Q psy12376 61 GNLTVYNHMTSKRVP 75 (89)
Q Consensus 61 ~~v~iwd~~~~~~~~ 75 (89)
..+.+||+++++-..
T Consensus 28 ~~v~~yd~~t~~W~~ 42 (50)
T PF13964_consen 28 NDVERYDPETNTWEQ 42 (50)
T ss_pred ccEEEEcCCCCcEEE
Confidence 357778887765543
No 481
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=34.39 E-value=1.6e+02 Score=20.62 Aligned_cols=67 Identities=15% Similarity=0.223 Sum_probs=39.6
Q ss_pred cEEEEEEccCCCEEEEEeC-CCcEEEEeCC--CCeEeeEe---cCCcceeec-------cEEEEEe-CCCCEEEEeCC--
Q psy12376 6 YIFLLQTSQVGQVLAIGTA-RGNLTVYNHM--TSKRVPVL---GKHTNTIVG-------QVLAIGT-ARGNLTVYNHM-- 69 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~-~g~v~iwd~~--~~~~~~~~---~~h~~~i~~-------~~las~s-~d~~v~iwd~~-- 69 (89)
+...+..+|||+||.++.. ...|-+|.+. +|+ +..+ ..+...-+. ++|+.+. ++.+|.+|.++
T Consensus 245 ~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~-L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~ 323 (346)
T COG2706 245 WAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGK-LELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE 323 (346)
T ss_pred ceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCE-EEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence 4678999999999988654 2277777764 343 3322 122221222 5555554 44578888874
Q ss_pred CCEE
Q psy12376 70 TSKR 73 (89)
Q Consensus 70 ~~~~ 73 (89)
+|.+
T Consensus 324 TG~L 327 (346)
T COG2706 324 TGRL 327 (346)
T ss_pred CceE
Confidence 4444
No 482
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=34.11 E-value=1.9e+02 Score=21.30 Aligned_cols=19 Identities=16% Similarity=0.314 Sum_probs=16.5
Q ss_pred CCCEEEEEeCCCcEEEEeCC
Q psy12376 15 VGQVLAIGTARGNLTVYNHM 34 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~ 34 (89)
||++|.... ++.+.|+|+.
T Consensus 21 DG~yIY~v~-~~~l~Iida~ 39 (521)
T PF09826_consen 21 DGEYIYVVS-GGRLYIIDAY 39 (521)
T ss_pred CCCEEEEEe-CCEEEEEECC
Confidence 899998877 7899999994
No 483
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []. This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A ....
Probab=33.78 E-value=54 Score=14.85 Aligned_cols=12 Identities=25% Similarity=0.412 Sum_probs=6.8
Q ss_pred CEEEEeCCCCEE
Q psy12376 62 NLTVYNHMTSKR 73 (89)
Q Consensus 62 ~v~iwd~~~~~~ 73 (89)
++..||.++++.
T Consensus 29 ~v~~yd~~~~~W 40 (47)
T PF01344_consen 29 SVEVYDPETNTW 40 (47)
T ss_dssp EEEEEETTTTEE
T ss_pred eEEEEeCCCCEE
Confidence 456666665544
No 484
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B.
Probab=33.63 E-value=57 Score=15.05 Aligned_cols=11 Identities=18% Similarity=0.263 Sum_probs=5.5
Q ss_pred EEEEeCCCCEE
Q psy12376 63 LTVYNHMTSKR 73 (89)
Q Consensus 63 v~iwd~~~~~~ 73 (89)
+.+||+.+++-
T Consensus 31 ~~~~d~~~~~W 41 (49)
T PF13418_consen 31 LWIFDIETNTW 41 (49)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCEE
Confidence 45555554443
No 485
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=33.07 E-value=1e+02 Score=23.70 Aligned_cols=37 Identities=22% Similarity=0.187 Sum_probs=27.0
Q ss_pred CCcEEEEEEccCCC---EEEEEeCCCcEEEEeCCCCeEee
Q psy12376 4 RYYIFLLQTSQVGQ---VLAIGTARGNLTVYNHMTSKRVP 40 (89)
Q Consensus 4 ~~~i~~~~~spdg~---~la~g~~~g~v~iwd~~~~~~~~ 40 (89)
+...+.+.+-.||+ -|+..+..|.+++.|.++|+.+.
T Consensus 455 p~qp~L~D~~~DG~~vpalv~ptk~G~~YVlDRrtGe~lv 494 (773)
T COG4993 455 PAQPTLLDITKDGKVVPALVHPTKNGFIYVLDRRTGELLV 494 (773)
T ss_pred CCCceEEEeecCCcEeeeeecccccCcEEEEEcCCCcccc
Confidence 44456667777875 55777888999999998887643
No 486
>PF03736 EPTP: EPTP domain; InterPro: IPR005492 Mutations in the LGI/EPT gene can result in a special form of epilepsy, autosomal dominant lateral temporal epilepsy. The Epitempin protein (also known as Leucine-rich glioma-inactivated protein) was seen to contain a 130 amino acid repeat in its C-terminal section, although a sub-domain of 50 amino acids has now been further defined within this. The architecture and structural features of this repeat make it a likely member 7-bladed beta-propeller fold []. This protein has now been found in a number of proteins associated with neurological disorders suggesting that it may play a role in the development of epilepsy and other related conditions [].
Probab=32.75 E-value=60 Score=15.07 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=9.4
Q ss_pred EEccCCC-EEEEEeCCC--cEEEEe
Q psy12376 11 QTSQVGQ-VLAIGTARG--NLTVYN 32 (89)
Q Consensus 11 ~~spdg~-~la~g~~~g--~v~iwd 32 (89)
.|+-+++ +|+.+...| .|+.||
T Consensus 19 ~F~i~~~~fl~~a~~~~~s~Iy~Wd 43 (44)
T PF03736_consen 19 PFSIGGDQFLAVASFFGDSQIYRWD 43 (44)
T ss_pred EEEECCEEEEEEEeCCCCCEEEEeC
Confidence 3343443 444444333 444444
No 487
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=32.20 E-value=2.4e+02 Score=21.85 Aligned_cols=58 Identities=14% Similarity=0.086 Sum_probs=38.2
Q ss_pred EEEEEeCCCcEEEEeCCCCeEeeE-------------------ecCCcceeec---cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 18 VLAIGTARGNLTVYNHMTSKRVPV-------------------LGKHTNTIVG---QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 18 ~la~g~~~g~v~iwd~~~~~~~~~-------------------~~~h~~~i~~---~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
...-+.-.|-+.-.|+++++.+.+ ++.-.+++-. -.+..+..|..++.+|..+|+.+-
T Consensus 645 lpcqap~wGyv~a~DlkTgk~~wk~~~gt~~d~~p~plp~~~g~pt~Ggp~~t~Ggv~f~a~~~dqYLrayd~~~G~~lW 724 (773)
T COG4993 645 LPCQAPPWGYVKAIDLKTGKELWKHRNGTVYDMTPVPLPFKVGFPTLGGPIGTAGGVAFIAATGDQYLRAYDGTGGKQLW 724 (773)
T ss_pred cccccCCcceeeeeeccccceeeeccCCccccCcccCcccccccccCCCccccccceEEEecchheeeeeeeccCCceee
Confidence 334455677788888888887655 2222222222 456677889999999999886654
No 488
>KOG4305|consensus
Probab=31.07 E-value=2.9e+02 Score=22.50 Aligned_cols=29 Identities=3% Similarity=0.019 Sum_probs=22.8
Q ss_pred cEEEEEeCCCCEEEEeCCCCEEEeeeCCCC
Q psy12376 52 QVLAIGTARGNLTVYNHMTSKRVPVLGKHT 81 (89)
Q Consensus 52 ~~las~s~d~~v~iwd~~~~~~~~~l~~h~ 81 (89)
.||++- .|..|.|||+++++.+....+|.
T Consensus 963 ~yiia~-~~~fIeI~~~~t~eli~~i~~~~ 991 (1029)
T KOG4305|consen 963 PYIIAF-GDNFIEIRDLETGELIQIILGQN 991 (1029)
T ss_pred ceEEEe-cCceEEEEecccceeeEEeeccc
Confidence 666654 67889999999999988766554
No 489
>COG5104 PRP40 Splicing factor [RNA processing and modification]
Probab=30.45 E-value=20 Score=25.98 Aligned_cols=59 Identities=22% Similarity=0.198 Sum_probs=39.2
Q ss_pred EeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEEEeeeCCCCC
Q psy12376 22 GTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKRVPVLGKHTK 82 (89)
Q Consensus 22 g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~~~~l~~h~~ 82 (89)
-+.||.|+.|+..+++....-. ...+.. ....+.+.||.++-||..+.+.....+.-.+
T Consensus 21 k~~dgRiYYYN~~T~kS~weKP--kell~~~e~~l~~~~Wke~~TadGkvyyyN~~TREs~W~iP~e~K 87 (590)
T COG5104 21 KAPDGRIYYYNKRTGKSSWEKP--KELLKGSEEDLDVDPWKECRTADGKVYYYNSITRESRWKIPPERK 87 (590)
T ss_pred hCCCCceEEEecccccccccCh--HHHhcchHhhhchhhHHHHhhcCCceEEecCccccccccCChhhh
Confidence 3568999999999987643221 111111 4566778999999999987776655544333
No 490
>PF09631 Sen15: Sen15 protein; InterPro: IPR018593 The Sen15 subunit of the tRNA intron-splicing endonuclease is one of the two structural subunits of this heterotetrameric enzyme. Residues 36-157 of this subunit possess a novel homodimeric fold. Each monomer consists of three alpha-helices and a mixed antiparallel/parallel beta-sheet. Two monomers of Sen15 fold with two monomers of Sen34, one of the two catalytic subunits, to form an alpha2-beta2 tetramer as part of the functional endonuclease assembly []. ; PDB: 2GW6_B.
Probab=29.69 E-value=54 Score=18.32 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=11.7
Q ss_pred EEEEEeCCCcEEEEeCCCCe
Q psy12376 18 VLAIGTARGNLTVYNHMTSK 37 (89)
Q Consensus 18 ~la~g~~~g~v~iwd~~~~~ 37 (89)
.||+...||+|..|-+..|-
T Consensus 76 ~LAiv~~DsTiVYY~i~~Gi 95 (101)
T PF09631_consen 76 LLAIVDDDSTIVYYKIHDGI 95 (101)
T ss_dssp EEEEE-TTS-EEEEEEE---
T ss_pred EEEEEcCCCCEEEEEEeCCc
Confidence 56777888888888776663
No 491
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=29.50 E-value=63 Score=24.30 Aligned_cols=19 Identities=16% Similarity=-0.073 Sum_probs=15.2
Q ss_pred CCcEEEEEEccCCCEEEEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIG 22 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g 22 (89)
..+++..+||||++.|..+
T Consensus 553 g~E~tG~~FspD~~TlFV~ 571 (616)
T COG3211 553 GCEFTGPCFSPDGKTLFVN 571 (616)
T ss_pred cceeecceeCCCCceEEEE
Confidence 3478999999999876664
No 492
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=28.35 E-value=2e+02 Score=19.65 Aligned_cols=29 Identities=14% Similarity=0.125 Sum_probs=17.6
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNH 33 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~ 33 (89)
..+..+.-++||.++|++..-.-+.-||.
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~ 173 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDP 173 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-T
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecC
Confidence 35788889999999888754444556664
No 493
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=28.19 E-value=1.4e+02 Score=21.38 Aligned_cols=30 Identities=23% Similarity=0.286 Sum_probs=23.5
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~ 35 (89)
....++.+|.|+.+|.....|.+.++....
T Consensus 45 ~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~ 74 (504)
T PF10433_consen 45 PGQYLAVDPSGRCIAVSAYEGNFLVYPLNR 74 (504)
T ss_dssp T--EEEE-TTSSEEEEEEBTTEEEEEE-SS
T ss_pred CCcEEEECCcCCEEEEEecCCeEEEEEecc
Confidence 356789999999999999999999998866
No 494
>KOG4305|consensus
Probab=26.94 E-value=2.5e+02 Score=22.83 Aligned_cols=25 Identities=4% Similarity=0.052 Sum_probs=20.8
Q ss_pred CCCcEEEEeCCCCeEeeEecCCcce
Q psy12376 24 ARGNLTVYNHMTSKRVPVLGKHTNT 48 (89)
Q Consensus 24 ~~g~v~iwd~~~~~~~~~~~~h~~~ 48 (89)
.+.-|.|||+++++.+..+.+|.-+
T Consensus 969 ~~~fIeI~~~~t~eli~~i~~~~Ir 993 (1029)
T KOG4305|consen 969 GDNFIEIRDLETGELIQIILGQNIR 993 (1029)
T ss_pred cCceEEEEecccceeeEEeecccee
Confidence 4679999999999999888777544
No 495
>PF02974 Inh: Protease inhibitor Inh; InterPro: IPR021140 This entry represents the metalloprotease inhibitor I38, as well as the outer membrane lipoprotein Omp19. Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. This family of proteins represent monomeric serralysin inhibitors of about 125 residues, which interact with specific metalloprotease which are synthesised by serralysin secretors and characterised by being plant, insect and animal pathogens. It is probable that the serralysin inhibitors protect the host from proteolysis during export of the protease. The members of this family belong to MEROPS proteinase inhibitor family I38, clan IK. X-ray crystallography of a complex between the Serratia marcescens protease, SmaPI, and the inhibitor of Erwinia chrysanthemi, Inh, reveals that Inh is folded into an eight-stranded b-barrel with an N-terminal trunk of 10 residues. Residues 1-5 occupy part of the extended active site of the proteinase, thereby preventing access of the substrate. Residues 6-10 form a linker that connects the N-terminal proteinase-binding peptide to the body of the b-barrel. The backbone carbonyl of Ser-1 interacts with the catalytic zinc; the Ser-2 side chain occupies the S1'-binding site and also forms a hydrogen bond to the carboxyl end of the catalytic Glu, whereas Leu-3 occupies the S2' recognition site. Penetration of the trunk region further than 5 residues into the substrate binding cleft appears to be prevented by the b-barrel, which itself interacts with the proteinase near its Met turn (19). Peptide mimetics of the trunk at concentrations up to about 100 mM do not inhibit the protease, demonstrating that the barrel is essential for inhibitory activity [, ]. Structurally and functionally these inhibitors are closely related to the lipocalins, fatty acid-binding proteins, avidins and the enigmatic triabin. Together these five protein families constitute the calycin superfamily []. The proteins are characterised by their high specificity for small hydrophobic molecules and by their ability to form complexes with soluble macromolecules either through intramolecular disulphides or protein-protein interactions []. ; PDB: 1JIW_I 2RN4_A 1SMP_I.
Probab=26.51 E-value=97 Score=17.24 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=12.2
Q ss_pred EEccCCCEEEEEeCCCcEEEE
Q psy12376 11 QTSQVGQVLAIGTARGNLTVY 31 (89)
Q Consensus 11 ~~spdg~~la~g~~~g~v~iw 31 (89)
.|.|.+..|+.-..+|...++
T Consensus 56 ~W~~~gd~l~L~d~~G~~v~~ 76 (99)
T PF02974_consen 56 GWRPTGDGLVLTDADGSVVAF 76 (99)
T ss_dssp EEEEETTEEEEE-TTS-EEEE
T ss_pred ceeEcCCEEEEECCCCCEEEE
Confidence 477777777666666655443
No 496
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=26.09 E-value=2.1e+02 Score=19.27 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=26.4
Q ss_pred cCCcEEEEEEccCCCEEEEEe------CCCcEEEEeCCCCe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGT------ARGNLTVYNHMTSK 37 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~------~~g~v~iwd~~~~~ 37 (89)
..+.|+.+.|..+.+.++.|. ....+..||..+..
T Consensus 35 i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~ 75 (281)
T PF12768_consen 35 ISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT 75 (281)
T ss_pred ceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe
Confidence 346799999997777777774 46688899987654
No 497
>PLN02193 nitrile-specifier protein
Probab=25.91 E-value=2.5e+02 Score=20.08 Aligned_cols=60 Identities=13% Similarity=0.206 Sum_probs=35.1
Q ss_pred CCCEEEEEeCC----CcEEEEeCCCCeEeeEecC----------Ccceeec-cEEEEEeCC--------------CCEEE
Q psy12376 15 VGQVLAIGTAR----GNLTVYNHMTSKRVPVLGK----------HTNTIVG-QVLAIGTAR--------------GNLTV 65 (89)
Q Consensus 15 dg~~la~g~~~----g~v~iwd~~~~~~~~~~~~----------h~~~i~~-~~las~s~d--------------~~v~i 65 (89)
+++.++.|+.+ ..+.+||..+.+-.. +.. |...+.. ++++.|+.+ +.+.+
T Consensus 328 ~gkiyviGG~~g~~~~dv~~yD~~t~~W~~-~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~ 406 (470)
T PLN02193 328 QGKVWVVYGFNGCEVDDVHYYDPVQDKWTQ-VETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFA 406 (470)
T ss_pred CCcEEEEECCCCCccCceEEEECCCCEEEE-eccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEE
Confidence 45666666554 468899988765322 211 1111111 677777753 25899
Q ss_pred EeCCCCEEEe
Q psy12376 66 YNHMTSKRVP 75 (89)
Q Consensus 66 wd~~~~~~~~ 75 (89)
+|+.+.+...
T Consensus 407 ~D~~t~~W~~ 416 (470)
T PLN02193 407 LDTETLQWER 416 (470)
T ss_pred EEcCcCEEEE
Confidence 9998776543
No 498
>KOG1897|consensus
Probab=25.73 E-value=3.7e+02 Score=21.97 Aligned_cols=65 Identities=15% Similarity=0.162 Sum_probs=39.7
Q ss_pred CcEEEEEEccCC---C---EEEEEeCCCcEEEEe-CCCCeEeeEec-CCc----ceeec------cEEEEEeCCCCEEEE
Q psy12376 5 YYIFLLQTSQVG---Q---VLAIGTARGNLTVYN-HMTSKRVPVLG-KHT----NTIVG------QVLAIGTARGNLTVY 66 (89)
Q Consensus 5 ~~i~~~~~spdg---~---~la~g~~~g~v~iwd-~~~~~~~~~~~-~h~----~~i~~------~~las~s~d~~v~iw 66 (89)
.++.|+.++|-| + ++|.|.++..+.+.- ..+...+...+ +-. +.+.+ .+|.++..||.+.-+
T Consensus 531 ~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~f 610 (1096)
T KOG1897|consen 531 YEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYF 610 (1096)
T ss_pred ceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEE
Confidence 468999999853 2 789998877544433 33443332221 111 11111 689999999998877
Q ss_pred eCC
Q psy12376 67 NHM 69 (89)
Q Consensus 67 d~~ 69 (89)
.+.
T Consensus 611 v~d 613 (1096)
T KOG1897|consen 611 VLD 613 (1096)
T ss_pred EEE
Confidence 764
No 499
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=25.71 E-value=75 Score=17.63 Aligned_cols=28 Identities=29% Similarity=0.417 Sum_probs=20.3
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMTSK 37 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~~~ 37 (89)
++.....|..+|+|+.+|. ++|-+.+.+
T Consensus 2 ~v~~~~~g~~lAiGG~~g~-~~Wfvtt~~ 29 (86)
T PF11090_consen 2 CVTIEHKGRPLAIGGNNGG-CLWFVTTNK 29 (86)
T ss_pred eEEEecCCeEEEEccccCC-eEEEEECcH
Confidence 5667778999999998863 456666544
No 500
>KOG4659|consensus
Probab=25.61 E-value=2.8e+02 Score=23.67 Aligned_cols=63 Identities=8% Similarity=0.067 Sum_probs=36.1
Q ss_pred EEEEEccCCCEEEEEeCCCcE-EEEeCCCCeEeeEecCCcceeec-----------------------cEEEEEeCCCCE
Q psy12376 8 FLLQTSQVGQVLAIGTARGNL-TVYNHMTSKRVPVLGKHTNTIVG-----------------------QVLAIGTARGNL 63 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v-~iwd~~~~~~~~~~~~h~~~i~~-----------------------~~las~s~d~~v 63 (89)
.+++++++|...++-++...| ++..+.+...+..+.+...+..| .+..+.+-||+|
T Consensus 596 r~Iavg~~G~lyvaEsD~rriNrvr~~~tdg~i~ilaGa~S~C~C~~~~~cdcfs~~~~~At~A~lnsp~alaVsPdg~v 675 (1899)
T KOG4659|consen 596 RDIAVGTDGALYVAESDGRRINRVRKLSTDGTISILAGAKSPCSCDVAACCDCFSLRDVAATQAKLNSPYALAVSPDGDV 675 (1899)
T ss_pred hceeecCCceEEEEeccchhhhheEEeccCceEEEecCCCCCCCcccccCCccccccchhhhccccCCcceEEECCCCcE
Confidence 578999999866665543333 22233332234444443332222 456667889999
Q ss_pred EEEeCCC
Q psy12376 64 TVYNHMT 70 (89)
Q Consensus 64 ~iwd~~~ 70 (89)
+|=|...
T Consensus 676 ~IAD~gN 682 (1899)
T KOG4659|consen 676 IIADSGN 682 (1899)
T ss_pred EEecCCc
Confidence 9988743
Done!