Query psy12376
Match_columns 89
No_of_seqs 102 out of 1326
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 17:34:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12376.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12376hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 99.8 8.9E-19 3E-23 113.1 11.3 85 2-86 11-102 (304)
2 1vyh_C Platelet-activating fac 99.8 3.9E-18 1.3E-22 114.2 10.5 85 2-86 106-197 (410)
3 2ymu_A WD-40 repeat protein; u 99.8 5.1E-18 1.7E-22 116.1 11.3 82 2-85 14-102 (577)
4 4gqb_B Methylosome protein 50; 99.8 9.1E-18 3.1E-22 110.8 11.8 77 2-78 125-209 (344)
5 3ow8_A WD repeat-containing pr 99.8 1.3E-17 4.4E-22 108.7 12.0 84 2-85 204-294 (321)
6 4h5i_A Guanine nucleotide-exch 99.8 1.3E-17 4.4E-22 110.5 11.4 68 2-69 267-342 (365)
7 3bg1_A Protein SEC13 homolog; 99.7 1.6E-17 5.4E-22 107.8 10.4 85 2-86 11-108 (316)
8 3ow8_A WD repeat-containing pr 99.7 5E-17 1.7E-21 105.9 12.4 83 3-85 163-252 (321)
9 4ery_A WD repeat-containing pr 99.7 5E-17 1.7E-21 104.4 12.1 84 2-85 21-111 (312)
10 3frx_A Guanine nucleotide-bind 99.7 6.2E-17 2.1E-21 105.1 12.5 83 2-85 63-152 (319)
11 2pm7_B Protein transport prote 99.7 2.6E-17 8.9E-22 105.9 10.2 84 2-85 7-103 (297)
12 2ynn_A Coatomer subunit beta'; 99.7 4.8E-17 1.6E-21 104.9 11.0 84 3-86 54-145 (304)
13 4ery_A WD repeat-containing pr 99.7 1.1E-16 3.6E-21 102.8 12.5 84 2-85 63-153 (312)
14 1vyh_C Platelet-activating fac 99.7 4.5E-17 1.5E-21 109.0 10.3 84 2-85 148-238 (410)
15 2pbi_B Guanine nucleotide-bind 99.7 1.7E-16 5.7E-21 104.5 12.4 84 3-86 153-245 (354)
16 2hes_X YDR267CP; beta-propelle 99.7 1.5E-16 5.1E-21 103.7 12.0 84 2-85 105-201 (330)
17 3frx_A Guanine nucleotide-bind 99.7 1.1E-16 3.7E-21 104.0 10.3 85 2-86 15-112 (319)
18 3f3f_A Nucleoporin SEH1; struc 99.7 3.8E-16 1.3E-20 99.5 12.0 84 2-85 9-114 (351)
19 3zwl_B Eukaryotic translation 99.7 3.6E-16 1.2E-20 100.9 11.9 81 2-83 30-117 (369)
20 3fm0_A Protein CIAO1; WDR39,SG 99.7 4.5E-16 1.6E-20 101.9 12.4 84 2-85 59-154 (345)
21 2xzm_R RACK1; ribosome, transl 99.7 2.7E-16 9.1E-21 102.7 11.2 85 2-86 19-123 (343)
22 4gqb_B Methylosome protein 50; 99.7 1.9E-16 6.5E-21 104.5 10.3 82 4-86 82-174 (344)
23 2hes_X YDR267CP; beta-propelle 99.7 1.1E-15 3.7E-20 99.6 13.0 83 3-85 57-157 (330)
24 3jrp_A Fusion protein of prote 99.7 3.2E-16 1.1E-20 101.5 9.9 84 2-85 9-105 (379)
25 3vl1_A 26S proteasome regulato 99.7 1E-15 3.5E-20 101.1 12.4 80 2-81 137-223 (420)
26 1got_B GT-beta; complex (GTP-b 99.7 1.8E-15 6.1E-20 98.8 13.2 77 2-78 182-265 (340)
27 1got_B GT-beta; complex (GTP-b 99.7 1.1E-15 3.8E-20 99.8 12.2 84 2-85 53-147 (340)
28 1erj_A Transcriptional repress 99.7 7E-16 2.4E-20 102.5 11.4 85 2-86 254-357 (393)
29 2aq5_A Coronin-1A; WD40 repeat 99.7 1.2E-15 4E-20 101.1 12.0 84 2-85 79-180 (402)
30 3fm0_A Protein CIAO1; WDR39,SG 99.7 8.7E-16 3E-20 100.6 11.2 85 2-86 13-110 (345)
31 3iz6_a 40S ribosomal protein R 99.7 3.4E-16 1.2E-20 103.6 9.0 85 2-86 64-162 (380)
32 3vu4_A KMHSV2; beta-propeller 99.7 9E-16 3.1E-20 101.1 11.0 70 2-71 193-272 (355)
33 2xzm_R RACK1; ribosome, transl 99.7 1.6E-15 5.3E-20 99.1 12.0 72 2-73 74-152 (343)
34 4g56_B MGC81050 protein; prote 99.7 7.9E-16 2.7E-20 101.5 10.3 76 2-77 137-220 (357)
35 1erj_A Transcriptional repress 99.7 2.6E-15 8.7E-20 99.8 12.8 73 6-78 125-204 (393)
36 3mkq_A Coatomer beta'-subunit; 99.7 1.1E-15 3.8E-20 108.0 11.3 85 2-86 11-102 (814)
37 4g56_B MGC81050 protein; prote 99.7 1.4E-15 4.9E-20 100.3 10.9 83 3-86 225-316 (357)
38 4e54_B DNA damage-binding prot 99.7 1.9E-15 6.4E-20 101.5 11.3 79 3-81 118-207 (435)
39 3sfz_A APAF-1, apoptotic pepti 99.7 1.7E-15 5.8E-20 111.4 12.1 84 2-85 613-703 (1249)
40 1nr0_A Actin interacting prote 99.6 2.8E-15 9.7E-20 104.6 12.4 78 2-79 188-279 (611)
41 1nr0_A Actin interacting prote 99.6 2.3E-15 8E-20 105.0 11.8 84 2-85 145-243 (611)
42 2ymu_A WD-40 repeat protein; u 99.6 1.6E-15 5.5E-20 103.7 10.7 82 2-85 465-553 (577)
43 3iz6_a 40S ribosomal protein R 99.6 3.1E-15 1E-19 99.1 11.4 85 2-86 247-349 (380)
44 4gga_A P55CDC, cell division c 99.6 5E-15 1.7E-19 98.9 12.3 82 3-84 146-233 (420)
45 3gre_A Serine/threonine-protei 99.6 4.3E-15 1.5E-19 98.9 12.0 83 3-85 213-307 (437)
46 4aow_A Guanine nucleotide-bind 99.6 5.8E-15 2E-19 94.7 12.1 81 2-82 36-129 (340)
47 2pbi_B Guanine nucleotide-bind 99.6 9.7E-15 3.3E-19 96.1 12.8 85 2-86 238-331 (354)
48 4gq1_A NUP37; propeller, trans 99.6 1.1E-15 3.8E-20 101.8 8.1 76 2-77 134-225 (393)
49 3k26_A Polycomb protein EED; W 99.6 7.1E-15 2.4E-19 94.8 11.6 83 3-85 68-165 (366)
50 3mmy_A MRNA export factor; mRN 99.6 3.5E-15 1.2E-19 96.2 9.9 83 2-85 37-131 (368)
51 4ggc_A P55CDC, cell division c 99.6 3.5E-15 1.2E-19 95.0 9.7 76 7-84 28-112 (318)
52 2aq5_A Coronin-1A; WD40 repeat 99.6 1.4E-14 4.7E-19 96.0 12.9 82 2-83 129-221 (402)
53 3dm0_A Maltose-binding peripla 99.6 8.5E-15 2.9E-19 103.1 12.1 83 2-84 428-520 (694)
54 3dm0_A Maltose-binding peripla 99.6 7.4E-15 2.5E-19 103.4 11.8 85 2-86 380-477 (694)
55 3lrv_A PRE-mRNA-splicing facto 99.6 5.5E-15 1.9E-19 96.4 9.9 85 2-86 123-219 (343)
56 4aez_A CDC20, WD repeat-contai 99.6 1.4E-14 4.7E-19 96.2 11.9 83 3-85 133-221 (401)
57 3sfz_A APAF-1, apoptotic pepti 99.6 1.3E-14 4.6E-19 106.7 12.3 84 2-85 655-747 (1249)
58 3dwl_C Actin-related protein 2 99.6 4.7E-16 1.6E-20 101.6 3.7 82 4-85 11-104 (377)
59 1gxr_A ESG1, transducin-like e 99.6 4.6E-14 1.6E-18 90.1 12.8 84 2-85 95-187 (337)
60 3f3f_A Nucleoporin SEH1; struc 99.6 1.4E-14 4.7E-19 92.2 10.2 73 2-74 212-341 (351)
61 1k8k_C P40, ARP2/3 complex 41 99.6 1E-14 3.4E-19 94.6 9.6 83 3-85 7-100 (372)
62 1pgu_A Actin interacting prote 99.6 1.9E-14 6.5E-19 98.5 11.4 84 2-85 486-588 (615)
63 1sq9_A Antiviral protein SKI8; 99.6 1.7E-14 5.9E-19 94.5 10.2 75 4-78 233-330 (397)
64 3dwl_C Actin-related protein 2 99.6 4.4E-15 1.5E-19 97.0 7.2 84 2-85 53-150 (377)
65 1r5m_A SIR4-interacting protei 99.6 8.5E-14 2.9E-18 91.1 13.1 80 3-83 107-193 (425)
66 2oaj_A Protein SNI1; WD40 repe 99.6 1.5E-14 5E-19 105.5 10.2 85 2-86 486-627 (902)
67 1p22_A F-BOX/WD-repeat protein 99.6 4.8E-14 1.6E-18 94.4 11.8 81 3-85 132-217 (435)
68 3v7d_B Cell division control p 99.6 5.8E-14 2E-18 94.1 12.1 76 2-77 308-388 (464)
69 3mkq_A Coatomer beta'-subunit; 99.6 2E-14 6.9E-19 101.6 10.3 85 2-86 53-145 (814)
70 3odt_A Protein DOA1; ubiquitin 99.6 2.9E-14 9.9E-19 90.4 10.0 81 3-84 183-269 (313)
71 3k26_A Polycomb protein EED; W 99.6 9.5E-15 3.2E-19 94.2 7.8 74 2-75 113-197 (366)
72 3dw8_B Serine/threonine-protei 99.6 2.5E-14 8.6E-19 94.9 9.9 72 2-73 26-129 (447)
73 1k8k_C P40, ARP2/3 complex 41 99.6 4.2E-14 1.4E-18 91.7 10.5 83 3-85 141-248 (372)
74 3jro_A Fusion protein of prote 99.6 1.1E-14 3.8E-19 104.0 8.4 85 2-86 7-104 (753)
75 2pm7_B Protein transport prote 99.6 3.4E-14 1.2E-18 91.3 9.9 84 3-86 98-209 (297)
76 3v7d_B Cell division control p 99.6 6.7E-14 2.3E-18 93.8 11.8 83 2-86 119-208 (464)
77 2ovr_B FBW7, F-BOX/WD repeat p 99.6 6E-14 2E-18 94.0 11.3 83 2-86 116-204 (445)
78 4ggc_A P55CDC, cell division c 99.6 1E-13 3.5E-18 88.2 11.8 82 3-84 66-153 (318)
79 3bg1_A Protein SEC13 homolog; 99.6 4E-14 1.4E-18 91.7 9.8 83 2-84 55-153 (316)
80 3vl1_A 26S proteasome regulato 99.6 5.2E-14 1.8E-18 92.9 10.4 81 6-86 99-186 (420)
81 3lrv_A PRE-mRNA-splicing facto 99.5 1.7E-14 5.7E-19 94.1 7.9 75 4-79 170-253 (343)
82 1p22_A F-BOX/WD-repeat protein 99.5 1E-13 3.5E-18 92.8 11.9 83 2-86 254-341 (435)
83 3mmy_A MRNA export factor; mRN 99.5 3.7E-14 1.2E-18 91.4 9.3 79 2-81 84-171 (368)
84 1yfq_A Cell cycle arrest prote 99.5 3.8E-14 1.3E-18 91.1 8.9 83 2-85 9-105 (342)
85 3odt_A Protein DOA1; ubiquitin 99.5 6.6E-14 2.3E-18 88.7 9.7 83 2-85 16-108 (313)
86 1yfq_A Cell cycle arrest prote 99.5 8.1E-14 2.8E-18 89.5 10.3 83 3-85 192-298 (342)
87 4gga_A P55CDC, cell division c 99.5 3.6E-14 1.2E-18 94.8 8.9 77 4-80 320-405 (420)
88 1gxr_A ESG1, transducin-like e 99.5 3.5E-13 1.2E-17 86.0 12.5 75 3-77 140-221 (337)
89 1r5m_A SIR4-interacting protei 99.5 1.3E-13 4.5E-18 90.2 10.7 84 2-85 245-334 (425)
90 4aow_A Guanine nucleotide-bind 99.5 2.5E-13 8.6E-18 87.0 11.8 76 2-78 213-294 (340)
91 3ei3_B DNA damage-binding prot 99.5 1.1E-13 3.7E-18 90.8 10.2 80 4-85 163-254 (383)
92 2pm9_A Protein WEB1, protein t 99.5 5E-14 1.7E-18 92.6 8.3 71 2-72 65-147 (416)
93 2oit_A Nucleoporin 214KDA; NH2 99.5 1.7E-13 5.7E-18 93.0 11.0 77 3-80 148-232 (434)
94 4h5i_A Guanine nucleotide-exch 99.5 1E-13 3.5E-18 91.7 9.7 84 3-86 218-317 (365)
95 2oaj_A Protein SNI1; WD40 repe 99.5 1.2E-13 4.1E-18 100.7 10.8 80 2-83 15-100 (902)
96 4a11_B DNA excision repair pro 99.5 1.7E-13 5.6E-18 89.5 10.4 77 2-78 41-139 (408)
97 4e54_B DNA damage-binding prot 99.5 7.7E-14 2.6E-18 93.6 8.9 81 2-82 248-339 (435)
98 3ei3_B DNA damage-binding prot 99.5 4E-13 1.4E-17 88.1 12.0 78 2-80 71-159 (383)
99 2ovr_B FBW7, F-BOX/WD repeat p 99.5 3.2E-13 1.1E-17 90.4 11.8 82 2-85 157-243 (445)
100 2vdu_B TRNA (guanine-N(7)-)-me 99.5 1.2E-13 4E-18 93.0 9.6 76 3-78 194-279 (450)
101 2j04_A TAU60, YPL007P, hypothe 99.5 1.4E-13 4.9E-18 96.9 10.3 81 2-85 83-186 (588)
102 2j04_A TAU60, YPL007P, hypothe 99.5 2.2E-13 7.7E-18 96.0 11.2 80 6-86 131-231 (588)
103 4aez_A CDC20, WD repeat-contai 99.5 3.5E-13 1.2E-17 89.4 11.6 77 2-78 215-301 (401)
104 3jrp_A Fusion protein of prote 99.5 2.8E-13 9.6E-18 87.7 10.4 84 2-85 53-151 (379)
105 2pm9_A Protein WEB1, protein t 99.5 1.5E-13 5.2E-18 90.3 9.2 84 3-86 213-310 (416)
106 2j04_B YDR362CP, TAU91; beta p 99.5 1.6E-13 5.6E-18 95.3 9.4 83 4-86 207-313 (524)
107 1pgu_A Actin interacting prote 99.5 7.1E-13 2.4E-17 90.7 12.5 84 2-85 158-257 (615)
108 3gre_A Serine/threonine-protei 99.5 4.7E-13 1.6E-17 89.0 11.1 81 4-84 168-260 (437)
109 3i2n_A WD repeat-containing pr 99.5 1.8E-13 6.2E-18 88.1 8.7 81 2-82 63-161 (357)
110 2oit_A Nucleoporin 214KDA; NH2 99.5 2.9E-14 9.9E-19 96.7 5.1 82 3-84 91-195 (434)
111 2w18_A PALB2, fancn, partner a 99.5 3.8E-13 1.3E-17 90.1 10.2 79 6-84 228-328 (356)
112 1sq9_A Antiviral protein SKI8; 99.5 2.1E-13 7.3E-18 89.3 8.9 76 3-79 185-276 (397)
113 2xyi_A Probable histone-bindin 99.5 4E-13 1.4E-17 90.1 9.7 84 2-85 229-325 (430)
114 3dw8_B Serine/threonine-protei 99.5 3.2E-13 1.1E-17 89.6 8.9 80 2-82 224-328 (447)
115 3zwl_B Eukaryotic translation 99.5 1.3E-12 4.6E-17 84.1 11.1 73 6-78 177-257 (369)
116 2vdu_B TRNA (guanine-N(7)-)-me 99.4 3.6E-13 1.2E-17 90.6 8.5 84 3-86 148-246 (450)
117 2xyi_A Probable histone-bindin 99.4 7.1E-13 2.4E-17 88.9 9.7 84 2-85 275-382 (430)
118 3i2n_A WD repeat-containing pr 99.4 2.7E-13 9.4E-18 87.2 7.3 83 3-85 208-325 (357)
119 4a11_B DNA excision repair pro 99.4 1.6E-12 5.6E-17 84.8 10.8 82 3-85 98-190 (408)
120 2j04_B YDR362CP, TAU91; beta p 99.4 6.2E-14 2.1E-18 97.4 4.0 85 2-86 306-402 (524)
121 4gq1_A NUP37; propeller, trans 99.4 1.7E-13 5.8E-18 91.2 5.6 77 10-86 95-191 (393)
122 3jro_A Fusion protein of prote 99.4 1.9E-12 6.6E-17 92.5 10.3 83 2-84 51-148 (753)
123 2w18_A PALB2, fancn, partner a 99.4 5.7E-12 1.9E-16 84.4 9.3 74 4-77 178-276 (356)
124 3vu4_A KMHSV2; beta-propeller 99.3 2.1E-11 7E-16 80.2 9.7 75 10-86 143-245 (355)
125 3bws_A Protein LP49; two-domai 99.3 7.2E-11 2.5E-15 78.2 10.3 78 3-80 168-253 (433)
126 1l0q_A Surface layer protein; 99.2 4.5E-10 1.5E-14 73.5 11.6 80 4-83 199-288 (391)
127 1l0q_A Surface layer protein; 99.2 3.3E-10 1.1E-14 74.1 10.5 76 5-81 32-116 (391)
128 3bws_A Protein LP49; two-domai 99.2 3.1E-11 1.1E-15 79.9 5.6 80 5-84 123-214 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.1 1.4E-09 4.7E-14 73.1 11.1 79 3-83 177-268 (415)
130 1k32_A Tricorn protease; prote 99.0 5.1E-09 1.7E-13 77.0 10.3 79 3-82 377-472 (1045)
131 1pby_B Quinohemoprotein amine 98.9 1.8E-08 6.2E-13 64.1 10.7 71 6-78 242-318 (337)
132 2ojh_A Uncharacterized protein 98.8 2.1E-08 7.1E-13 62.3 8.0 82 3-84 171-274 (297)
133 2ecf_A Dipeptidyl peptidase IV 98.8 2.8E-08 9.7E-13 70.0 8.2 78 5-83 37-153 (741)
134 1jmx_B Amine dehydrogenase; ox 98.8 1.9E-07 6.4E-12 59.7 11.2 72 6-79 256-334 (349)
135 2hqs_A Protein TOLB; TOLB, PAL 98.8 3.6E-08 1.2E-12 66.2 8.0 81 4-87 310-403 (415)
136 3o4h_A Acylamino-acid-releasin 98.7 2.1E-08 7.1E-13 69.3 6.5 74 8-83 153-239 (582)
137 1nir_A Nitrite reductase; hemo 98.7 6.3E-08 2.1E-12 67.4 8.8 78 6-83 325-422 (543)
138 3vgz_A Uncharacterized protein 98.7 5.1E-07 1.7E-11 57.9 11.0 72 7-78 143-223 (353)
139 2ojh_A Uncharacterized protein 98.6 3.6E-07 1.2E-11 56.7 9.0 69 3-72 40-121 (297)
140 1nir_A Nitrite reductase; hemo 98.6 5.5E-07 1.9E-11 62.7 10.8 73 7-79 181-266 (543)
141 3pe7_A Oligogalacturonate lyas 98.6 3.3E-07 1.1E-11 59.7 9.0 69 10-78 41-119 (388)
142 2ecf_A Dipeptidyl peptidase IV 98.6 1.5E-07 5.2E-12 66.3 7.8 72 7-80 111-191 (741)
143 3vgz_A Uncharacterized protein 98.6 1.4E-06 4.7E-11 55.8 11.6 74 5-78 231-311 (353)
144 3o4h_A Acylamino-acid-releasin 98.6 3.7E-07 1.3E-11 63.0 9.4 70 3-75 193-279 (582)
145 1xfd_A DIP, dipeptidyl aminope 98.6 2E-08 6.8E-13 70.5 2.7 67 6-73 18-103 (723)
146 1xfd_A DIP, dipeptidyl aminope 98.6 1.7E-07 5.9E-12 65.7 7.2 73 6-80 62-153 (723)
147 3u4y_A Uncharacterized protein 98.5 1.3E-06 4.3E-11 55.8 10.0 71 9-79 44-126 (331)
148 1pby_B Quinohemoprotein amine 98.5 8.5E-07 2.9E-11 56.3 8.7 72 6-79 83-172 (337)
149 1ri6_A Putative isomerase YBHE 98.5 4.1E-07 1.4E-11 57.9 7.1 66 4-69 37-114 (343)
150 1xip_A Nucleoporin NUP159; bet 98.5 7.1E-07 2.4E-11 60.4 8.0 69 3-75 87-160 (388)
151 4a5s_A Dipeptidyl peptidase 4 98.5 3.3E-07 1.1E-11 65.3 6.7 75 6-83 18-113 (740)
152 3hfq_A Uncharacterized protein 98.5 2.2E-06 7.6E-11 55.3 9.7 70 6-75 241-324 (347)
153 1jmx_B Amine dehydrogenase; ox 98.5 1E-06 3.5E-11 56.3 8.0 71 8-78 3-82 (349)
154 1k32_A Tricorn protease; prote 98.5 9.8E-07 3.3E-11 65.0 8.7 77 6-84 339-423 (1045)
155 1z68_A Fibroblast activation p 98.4 4.1E-07 1.4E-11 64.1 5.8 68 7-75 62-144 (719)
156 1ri6_A Putative isomerase YBHE 98.4 4.8E-06 1.6E-10 52.9 10.1 67 6-73 232-313 (343)
157 2z3z_A Dipeptidyl aminopeptida 98.4 1.7E-06 5.7E-11 60.8 8.4 65 7-71 183-294 (706)
158 3u4y_A Uncharacterized protein 98.3 4.4E-06 1.5E-10 53.3 8.8 69 5-73 176-255 (331)
159 2oiz_A Aromatic amine dehydrog 98.3 8.5E-06 2.9E-10 53.8 10.2 67 10-78 259-344 (361)
160 2z3z_A Dipeptidyl aminopeptida 98.3 4.5E-06 1.5E-10 58.6 9.0 79 4-82 257-355 (706)
161 3azo_A Aminopeptidase; POP fam 98.3 1.7E-06 5.9E-11 60.3 6.8 77 4-81 129-241 (662)
162 3azo_A Aminopeptidase; POP fam 98.3 4.6E-06 1.6E-10 58.1 8.3 75 5-79 188-283 (662)
163 1z68_A Fibroblast activation p 98.2 1E-06 3.6E-11 62.0 4.7 64 9-73 20-102 (719)
164 2bkl_A Prolyl endopeptidase; m 98.2 7.3E-06 2.5E-10 58.0 8.2 67 6-72 122-213 (695)
165 3c5m_A Oligogalacturonate lyas 98.2 4.5E-06 1.5E-10 54.2 6.5 72 7-78 38-119 (396)
166 2dg1_A DRP35, lactonase; beta 98.2 2.8E-05 9.6E-10 49.8 10.1 70 5-74 45-125 (333)
167 3scy_A Hypothetical bacterial 98.2 2.8E-05 9.5E-10 50.4 10.0 64 6-69 212-290 (361)
168 3scy_A Hypothetical bacterial 98.1 3.5E-05 1.2E-09 49.9 10.0 70 6-76 260-345 (361)
169 3hfq_A Uncharacterized protein 98.1 1.8E-05 6E-10 51.0 8.4 69 5-73 86-175 (347)
170 4a5s_A Dipeptidyl peptidase 4 98.1 4.6E-06 1.6E-10 59.4 6.0 66 8-75 65-146 (740)
171 3e5z_A Putative gluconolactona 98.1 3.2E-05 1.1E-09 49.0 8.8 69 6-76 29-105 (296)
172 2xdw_A Prolyl endopeptidase; a 98.1 1.7E-05 5.7E-10 56.3 8.0 67 6-72 126-219 (710)
173 2gop_A Trilobed protease; beta 98.1 2.9E-05 9.8E-10 49.8 8.5 65 7-73 61-164 (347)
174 3pe7_A Oligogalacturonate lyas 98.0 4.6E-05 1.6E-09 49.5 8.6 69 8-76 84-183 (388)
175 2hz6_A Endoplasmic reticulum t 98.0 1.6E-05 5.6E-10 52.7 5.9 61 15-77 8-75 (369)
176 3fvz_A Peptidyl-glycine alpha- 97.9 0.00014 4.7E-09 47.0 9.9 67 5-71 24-122 (329)
177 2oiz_A Aromatic amine dehydrog 97.9 5.6E-05 1.9E-09 49.8 8.2 68 9-76 54-146 (361)
178 3no2_A Uncharacterized protein 97.9 6.6E-05 2.2E-09 48.0 8.0 71 8-79 128-204 (276)
179 3c5m_A Oligogalacturonate lyas 97.9 6.9E-05 2.4E-09 48.5 7.9 68 10-77 86-184 (396)
180 1jof_A Carboxy-CIS,CIS-muconat 97.9 8.1E-05 2.8E-09 48.7 7.8 67 6-72 255-343 (365)
181 1q7f_A NHL, brain tumor CG1071 97.9 0.00017 6E-09 45.2 8.9 64 5-70 207-280 (286)
182 1qks_A Cytochrome CD1 nitrite 97.8 0.00028 9.5E-09 49.7 10.5 72 6-77 198-282 (567)
183 3e5z_A Putative gluconolactona 97.8 0.0004 1.4E-08 43.8 10.2 72 6-80 173-255 (296)
184 1jof_A Carboxy-CIS,CIS-muconat 97.8 7.7E-05 2.6E-09 48.8 7.0 68 6-74 41-133 (365)
185 3fvz_A Peptidyl-glycine alpha- 97.8 0.001 3.5E-08 42.9 11.9 72 7-78 198-285 (329)
186 1yiq_A Quinohemoprotein alcoho 97.7 0.00016 5.4E-09 51.8 8.2 54 25-78 454-513 (689)
187 1q7f_A NHL, brain tumor CG1071 97.7 0.00046 1.6E-08 43.2 9.5 71 6-78 165-245 (286)
188 3dsm_A Uncharacterized protein 97.7 0.00099 3.4E-08 43.1 10.4 73 5-77 84-168 (328)
189 2xdw_A Prolyl endopeptidase; a 97.6 0.00017 5.8E-09 51.1 7.1 64 7-70 173-268 (710)
190 3no2_A Uncharacterized protein 97.6 0.00051 1.7E-08 43.8 8.7 72 6-79 78-163 (276)
191 1yr2_A Prolyl oligopeptidase; 97.6 0.0011 3.9E-08 47.3 10.8 76 6-81 269-363 (741)
192 2bkl_A Prolyl endopeptidase; m 97.5 0.00033 1.1E-08 49.6 7.5 66 8-73 171-264 (695)
193 1kb0_A Quinohemoprotein alcoho 97.5 0.00057 1.9E-08 48.8 8.2 53 26-78 457-515 (677)
194 3sjl_D Methylamine dehydrogena 97.5 0.00058 2E-08 46.2 7.8 69 9-77 82-176 (386)
195 2qe8_A Uncharacterized protein 97.5 0.0028 9.4E-08 41.2 10.6 77 5-81 67-165 (343)
196 2mad_H Methylamine dehydrogena 97.4 0.0033 1.1E-07 41.8 10.7 70 7-76 269-356 (373)
197 1yr2_A Prolyl oligopeptidase; 97.4 0.00078 2.7E-08 48.1 7.9 67 6-72 164-254 (741)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 97.4 0.0018 6.2E-08 40.7 8.8 66 5-70 226-299 (314)
199 3g4e_A Regucalcin; six bladed 97.4 0.0024 8.3E-08 40.6 9.2 74 7-80 151-239 (297)
200 2mad_H Methylamine dehydrogena 97.3 0.0034 1.2E-07 41.8 9.6 66 7-74 127-199 (373)
201 1mda_H Methylamine dehydrogena 97.3 0.0023 7.8E-08 42.9 8.7 69 10-78 269-354 (368)
202 1rwi_B Serine/threonine-protei 97.2 0.0011 3.9E-08 40.8 6.5 67 5-71 192-265 (270)
203 1xip_A Nucleoporin NUP159; bet 97.2 0.0041 1.4E-07 42.0 9.5 63 5-73 127-194 (388)
204 2dg1_A DRP35, lactonase; beta 97.2 0.0073 2.5E-07 38.4 10.3 69 5-73 87-174 (333)
205 2hz6_A Endoplasmic reticulum t 97.2 0.00018 6.1E-09 47.6 2.6 68 10-77 124-199 (369)
206 2iwa_A Glutamine cyclotransfer 97.2 0.0092 3.1E-07 38.4 10.4 71 7-77 23-102 (266)
207 3dsm_A Uncharacterized protein 97.2 0.0091 3.1E-07 38.6 10.4 71 6-77 45-121 (328)
208 2ad6_A Methanol dehydrogenase 97.1 0.0035 1.2E-07 44.0 8.8 54 25-78 443-502 (571)
209 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.0065 2.2E-07 39.5 9.6 63 15-77 276-344 (376)
210 3sjl_D Methylamine dehydrogena 97.1 0.0073 2.5E-07 40.9 9.9 66 8-73 140-212 (386)
211 3iuj_A Prolyl endopeptidase; h 97.1 0.0016 5.6E-08 46.3 7.0 67 6-72 130-219 (693)
212 1rwi_B Serine/threonine-protei 97.0 0.0041 1.4E-07 38.3 7.6 68 6-73 151-225 (270)
213 2ghs_A AGR_C_1268P; regucalcin 97.0 0.016 5.6E-07 37.3 10.5 70 7-77 181-266 (326)
214 3c75_H MADH, methylamine dehyd 97.0 0.0056 1.9E-07 41.8 8.3 69 9-77 122-216 (426)
215 1flg_A Protein (quinoprotein e 96.9 0.0044 1.5E-07 43.6 7.8 54 25-78 465-524 (582)
216 3nol_A Glutamine cyclotransfer 96.9 0.013 4.4E-07 37.8 9.2 71 7-78 45-124 (262)
217 3q7m_A Lipoprotein YFGL, BAMB; 96.9 0.016 5.6E-07 37.6 9.7 63 15-77 52-129 (376)
218 2gop_A Trilobed protease; beta 96.9 0.011 3.8E-07 37.6 8.7 73 4-82 262-341 (347)
219 1qks_A Cytochrome CD1 nitrite 96.8 0.0095 3.2E-07 41.9 8.4 64 14-77 165-236 (567)
220 3hrp_A Uncharacterized protein 96.7 0.012 4.1E-07 39.5 8.4 67 6-72 132-205 (409)
221 1kv9_A Type II quinohemoprotei 96.7 0.01 3.5E-07 42.3 8.1 54 25-78 437-496 (668)
222 3c75_H MADH, methylamine dehyd 96.6 0.0074 2.5E-07 41.2 6.8 68 10-77 324-409 (426)
223 1yiq_A Quinohemoprotein alcoho 96.6 0.011 3.9E-07 42.2 7.9 67 9-75 239-343 (689)
224 3iuj_A Prolyl endopeptidase; h 96.6 0.019 6.6E-07 40.8 9.0 67 6-72 235-316 (693)
225 2z2n_A Virginiamycin B lyase; 96.6 0.052 1.8E-06 33.4 10.1 68 5-74 57-132 (299)
226 1pjx_A Dfpase, DIISOPROPYLFLUO 96.6 0.013 4.4E-07 36.7 7.3 71 7-77 174-263 (314)
227 3mbr_X Glutamine cyclotransfer 96.6 0.056 1.9E-06 34.4 10.1 71 7-78 23-102 (243)
228 1w6s_A Methanol dehydrogenase 96.5 0.031 1.1E-06 39.6 9.8 54 24-77 451-510 (599)
229 2z2n_A Virginiamycin B lyase; 96.5 0.064 2.2E-06 33.0 10.0 68 6-75 100-175 (299)
230 3nok_A Glutaminyl cyclase; bet 96.4 0.021 7.1E-07 37.0 7.4 71 7-78 57-133 (268)
231 3dr2_A Exported gluconolactona 96.4 0.036 1.2E-06 35.1 8.5 65 6-73 46-118 (305)
232 1kb0_A Quinohemoprotein alcoho 96.3 0.03 1E-06 40.0 8.7 69 9-77 247-353 (677)
233 3g4e_A Regucalcin; six bladed 96.3 0.051 1.7E-06 34.4 8.7 45 6-50 200-244 (297)
234 1mda_H Methylamine dehydrogena 96.1 0.0089 3E-07 40.0 4.6 41 6-46 315-357 (368)
235 1kv9_A Type II quinohemoprotei 96.0 0.043 1.5E-06 39.1 8.3 67 9-75 234-338 (668)
236 2ghs_A AGR_C_1268P; regucalcin 95.9 0.12 4.1E-06 33.2 9.4 65 7-75 51-123 (326)
237 2qc5_A Streptogramin B lactona 95.7 0.19 6.4E-06 30.9 10.1 67 5-73 20-94 (300)
238 3hrp_A Uncharacterized protein 95.7 0.076 2.6E-06 35.5 7.8 65 10-74 176-253 (409)
239 1fwx_A Nitrous oxide reductase 95.6 0.025 8.4E-07 40.4 5.5 64 7-70 279-361 (595)
240 2qc5_A Streptogramin B lactona 95.6 0.2 6.7E-06 30.8 10.1 68 5-74 62-137 (300)
241 2ece_A 462AA long hypothetical 95.5 0.11 3.8E-06 36.0 8.2 68 9-77 142-244 (462)
242 2qe8_A Uncharacterized protein 95.5 0.095 3.2E-06 33.9 7.6 71 6-77 18-109 (343)
243 2iwa_A Glutamine cyclotransfer 95.2 0.15 5.1E-06 32.8 7.7 66 12-77 112-188 (266)
244 3nok_A Glutaminyl cyclase; bet 95.1 0.14 4.9E-06 33.0 7.5 57 20-76 110-170 (268)
245 3qqz_A Putative uncharacterize 95.1 0.36 1.2E-05 30.7 9.7 67 3-70 25-100 (255)
246 3hxj_A Pyrrolo-quinoline quino 95.0 0.22 7.5E-06 31.2 8.1 60 16-77 107-172 (330)
247 1npe_A Nidogen, entactin; glyc 95.0 0.34 1.1E-05 29.9 10.5 73 6-78 168-246 (267)
248 3hxj_A Pyrrolo-quinoline quino 94.9 0.2 7E-06 31.4 7.7 66 8-78 140-211 (330)
249 3mbr_X Glutamine cyclotransfer 94.9 0.21 7.2E-06 31.7 7.6 64 14-77 112-186 (243)
250 3dr2_A Exported gluconolactona 94.8 0.35 1.2E-05 30.5 8.8 69 7-77 190-273 (305)
251 2ad6_A Methanol dehydrogenase 94.7 0.24 8.1E-06 34.8 8.2 62 16-77 115-192 (571)
252 1w6s_A Methanol dehydrogenase 94.6 0.17 5.9E-06 35.9 7.5 68 10-77 111-198 (599)
253 1flg_A Protein (quinoprotein e 94.6 0.43 1.5E-05 33.6 9.3 69 9-77 250-362 (582)
254 3nol_A Glutamine cyclotransfer 94.3 0.23 7.8E-06 32.0 6.8 67 11-77 131-208 (262)
255 2xe4_A Oligopeptidase B; hydro 93.5 0.32 1.1E-05 35.1 7.2 66 6-71 175-257 (751)
256 2be1_A Serine/threonine-protei 93.4 0.98 3.4E-05 30.0 8.9 58 17-74 11-80 (339)
257 1k3i_A Galactose oxidase precu 93.1 0.7 2.4E-05 32.6 8.2 67 9-75 247-328 (656)
258 1k3i_A Galactose oxidase precu 91.8 1.2 4.2E-05 31.4 8.2 68 9-76 190-280 (656)
259 4gq2_M Nucleoporin NUP120; bet 91.6 2.7 9.2E-05 31.4 10.0 26 52-77 248-273 (950)
260 4fhn_B Nucleoporin NUP120; pro 90.1 2.5 8.5E-05 32.1 8.7 26 52-77 250-275 (1139)
261 4gq2_M Nucleoporin NUP120; bet 89.9 1.1 3.8E-05 33.5 6.7 36 6-41 237-272 (950)
262 2p4o_A Hypothetical protein; p 89.8 2.5 8.7E-05 26.6 11.1 68 6-74 33-108 (306)
263 2be1_A Serine/threonine-protei 89.6 0.78 2.7E-05 30.4 5.2 56 23-78 64-138 (339)
264 1npe_A Nidogen, entactin; glyc 89.4 2.5 8.4E-05 25.9 9.0 64 7-70 38-110 (267)
265 4a2l_A BT_4663, two-component 89.4 4.6 0.00016 29.0 11.2 70 5-75 406-485 (795)
266 2fp8_A Strictosidine synthase; 89.3 1.5 5E-05 27.8 6.3 32 7-38 21-52 (322)
267 3f7f_A Nucleoporin NUP120; nuc 89.0 3.6 0.00012 30.2 8.5 72 4-77 161-257 (729)
268 2p4o_A Hypothetical protein; p 89.0 3 0.0001 26.3 10.1 66 6-71 73-148 (306)
269 2xe4_A Oligopeptidase B; hydro 87.5 6.2 0.00021 28.4 9.1 30 7-36 273-305 (751)
270 3ei3_A DNA damage-binding prot 87.4 6 0.0002 30.4 9.2 65 4-69 553-635 (1158)
271 4fhn_B Nucleoporin NUP120; pro 85.3 1.1 3.7E-05 34.1 4.3 35 7-41 240-274 (1139)
272 1n7d_A LDL receptor, low-densi 85.2 8.6 0.00029 27.7 9.5 71 7-77 542-621 (699)
273 1fwx_A Nitrous oxide reductase 84.7 5.6 0.00019 28.5 7.5 30 6-35 332-361 (595)
274 2ece_A 462AA long hypothetical 84.6 4.8 0.00016 28.0 7.0 66 13-78 90-181 (462)
275 4a2l_A BT_4663, two-component 83.8 9.9 0.00034 27.3 10.1 71 5-76 357-442 (795)
276 3pbp_A Nucleoporin NUP82; beta 83.8 4.7 0.00016 28.0 6.6 64 6-70 67-158 (452)
277 2fp8_A Strictosidine synthase; 83.3 6.1 0.00021 24.8 6.8 36 7-43 231-276 (322)
278 3pbp_A Nucleoporin NUP82; beta 83.3 2.5 8.4E-05 29.3 5.1 32 4-35 124-158 (452)
279 3das_A Putative oxidoreductase 81.4 3.5 0.00012 27.3 5.2 33 6-38 33-65 (347)
280 3sov_A LRP-6, low-density lipo 80.5 9.1 0.00031 24.6 8.2 67 7-73 168-241 (318)
281 3f7f_A Nucleoporin NUP120; nuc 80.4 6.1 0.00021 29.1 6.4 34 6-41 223-256 (729)
282 3sbq_A Nitrous-oxide reductase 75.0 4 0.00014 29.5 4.1 64 7-70 325-408 (638)
283 2xbg_A YCF48-like protein; pho 74.8 14 0.00047 23.6 8.1 61 6-68 251-320 (327)
284 3tc9_A Hypothetical hydrolase; 74.7 16 0.00056 24.4 7.9 63 7-69 228-300 (430)
285 3sre_A PON1, serum paraoxonase 73.9 4 0.00014 27.1 3.8 28 7-34 223-251 (355)
286 2xn4_A Kelch-like protein 2; s 73.3 14 0.00047 22.9 7.4 61 15-75 204-281 (302)
287 2xzh_A Clathrin heavy chain 1; 71.7 20 0.0007 24.2 9.5 72 9-83 71-149 (365)
288 3amr_A 3-phytase; beta-propell 71.4 20 0.00069 24.0 8.5 64 6-69 129-209 (355)
289 2g8s_A Glucose/sorbosone dehyd 70.9 9.1 0.00031 24.9 4.9 28 6-34 19-47 (353)
290 2vpj_A Kelch-like protein 12; 69.9 17 0.00057 22.5 6.8 61 15-75 206-283 (301)
291 1cru_A Protein (soluble quinop 67.8 12 0.00042 25.4 5.2 32 6-37 28-59 (454)
292 1tl2_A L10, protein (tachylect 67.0 4.9 0.00017 25.5 2.8 28 6-35 42-69 (236)
293 3v65_B Low-density lipoprotein 65.9 25 0.00086 23.0 7.8 68 7-74 248-322 (386)
294 3v9f_A Two-component system se 65.5 34 0.0012 24.4 8.9 67 5-73 407-481 (781)
295 3v9f_A Two-component system se 64.9 35 0.0012 24.4 9.6 69 5-75 450-529 (781)
296 3v65_B Low-density lipoprotein 63.6 28 0.00097 22.8 8.6 65 6-70 117-190 (386)
297 3v64_C Agrin; beta propeller, 63.1 28 0.00094 22.5 8.6 67 6-72 204-277 (349)
298 2ism_A Putative oxidoreductase 62.6 20 0.00067 23.3 5.3 26 6-32 32-57 (352)
299 1ijq_A LDL receptor, low-densi 61.9 27 0.00094 22.0 9.2 69 6-75 165-243 (316)
300 1bpo_A Protein (clathrin); cla 61.9 39 0.0013 23.8 9.1 73 9-83 70-148 (494)
301 3p5b_L Low density lipoprotein 61.7 32 0.0011 22.7 9.7 70 6-75 247-325 (400)
302 4asc_A Kelch repeat and BTB do 61.3 27 0.00092 21.8 7.2 62 15-76 196-283 (315)
303 3ii7_A Kelch-like protein 7; p 60.6 27 0.00092 21.6 7.5 61 15-75 55-132 (306)
304 3a9g_A Putative uncharacterize 59.7 12 0.00043 24.3 3.9 30 6-37 30-59 (354)
305 3v64_C Agrin; beta propeller, 59.7 32 0.0011 22.2 8.9 66 6-71 74-148 (349)
306 1ijq_A LDL receptor, low-densi 58.3 32 0.0011 21.7 8.9 66 6-71 31-109 (316)
307 3p5b_L Low density lipoprotein 55.6 41 0.0014 22.2 9.4 67 6-72 113-192 (400)
308 3ei3_A DNA damage-binding prot 54.0 74 0.0025 24.6 7.8 57 17-74 524-595 (1158)
309 4hw6_A Hypothetical protein, I 52.5 50 0.0017 22.1 6.4 63 7-69 230-303 (433)
310 2xzh_A Clathrin heavy chain 1; 52.2 52 0.0018 22.2 9.0 63 7-75 262-327 (365)
311 3tc9_A Hypothetical hydrolase; 52.2 22 0.00074 23.8 4.2 28 7-34 272-300 (430)
312 3ott_A Two-component system se 48.6 70 0.0024 22.7 7.4 65 7-73 193-263 (758)
313 2wg3_C Hedgehog-interacting pr 48.6 25 0.00084 24.1 4.1 29 6-34 15-44 (463)
314 2xbg_A YCF48-like protein; pho 48.4 50 0.0017 20.9 8.8 25 5-30 163-187 (327)
315 1bpo_A Protein (clathrin); cla 47.5 71 0.0024 22.5 8.2 63 7-75 261-326 (494)
316 3m0c_C LDL receptor, low-densi 45.9 87 0.003 23.1 8.9 68 6-73 425-505 (791)
317 1cru_A Protein (soluble quinop 45.2 49 0.0017 22.4 5.1 23 6-28 406-429 (454)
318 1n7d_A LDL receptor, low-densi 45.0 44 0.0015 24.0 5.1 68 7-74 408-488 (699)
319 1zgk_A Kelch-like ECH-associat 43.9 56 0.0019 20.2 7.0 61 15-75 215-292 (308)
320 1ukf_A Avirulence protein AVRP 43.1 37 0.0013 20.8 3.8 33 6-38 120-153 (188)
321 4hvt_A Ritya.17583.B, post-pro 37.0 46 0.0016 24.2 4.1 34 7-40 131-170 (711)
322 1zso_A Hypothetical protein; s 35.9 69 0.0024 19.0 4.7 31 7-37 112-142 (164)
323 2pag_A Hypothetical protein; n 35.2 37 0.0013 19.2 2.9 29 6-36 86-114 (135)
324 2ldu_A Heat shock factor prote 34.9 27 0.00091 19.7 2.2 13 9-21 36-48 (125)
325 4a0p_A LRP6, LRP-6, low-densit 32.5 1.3E+02 0.0046 21.3 8.5 66 6-71 38-112 (628)
326 4a9v_A PHOX; hydrolase, beta-p 32.1 42 0.0014 24.2 3.2 18 5-22 531-548 (592)
327 1q47_A Semaphorin 3A; beta pro 30.2 59 0.002 22.6 3.7 26 5-30 462-487 (495)
328 4hw6_A Hypothetical protein, I 29.3 1.3E+02 0.0044 20.1 7.9 36 7-42 141-178 (433)
329 3zwu_A Alkaline phosphatase PH 28.7 51 0.0017 23.6 3.2 18 5-22 531-548 (592)
330 1xi4_A Clathrin heavy chain; a 28.5 65 0.0022 26.2 3.9 71 9-82 70-147 (1630)
331 1s28_A ORF1; type III chaperon 27.6 91 0.0031 17.8 3.6 29 2-31 27-55 (132)
332 2uvk_A YJHT; unknown function, 27.6 1.2E+02 0.004 19.1 7.3 15 61-75 168-182 (357)
333 4gz8_A Semaphorin-3A; multi-do 27.5 71 0.0024 23.3 3.8 27 4-30 469-495 (667)
334 1sr4_A CDT A, cytolethal diste 26.8 1.2E+02 0.004 18.8 7.1 60 18-77 99-166 (206)
335 2hc5_A ORF 99, hypothetical pr 24.7 80 0.0027 17.6 3.0 18 27-44 70-87 (117)
336 3amr_A 3-phytase; beta-propell 24.7 1.6E+02 0.0055 19.6 10.4 74 4-77 179-271 (355)
337 3s94_A LRP-6, low-density lipo 23.6 2E+02 0.0068 20.3 8.7 66 6-71 350-424 (619)
338 2zwa_A Leucine carboxyl methyl 23.3 2.1E+02 0.0071 20.5 7.8 61 15-75 451-527 (695)
339 1hks_A Heat-shock transcriptio 23.2 20 0.00068 19.5 0.2 12 9-20 23-34 (106)
340 3mwp_A Nucleoprotein; structur 21.5 22 0.00074 25.0 0.2 18 55-72 161-178 (577)
341 3m0c_C LDL receptor, low-densi 21.2 2.5E+02 0.0086 20.7 9.8 65 6-70 515-589 (791)
342 3kya_A Putative phosphatase; s 21.0 2.2E+02 0.0074 19.8 9.2 64 6-69 187-277 (496)
343 3ott_A Two-component system se 20.8 2.3E+02 0.0079 20.1 9.7 66 6-74 64-134 (758)
344 1xi4_A Clathrin heavy chain; a 20.6 3.2E+02 0.011 22.5 6.3 33 7-39 261-293 (1630)
345 3s25_A Hypothetical 7-bladed b 20.5 1.7E+02 0.0059 18.5 9.0 66 10-76 109-182 (302)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.80 E-value=8.9e-19 Score=113.05 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=78.1
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|.+.|++++|+|+|++||+++.||.|++||..+++.+..+..|..++.+ ++|++|+.|++|++||+.+++..
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 46788999999999999999999999999999999999999999888876 79999999999999999999999
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
..+.+|+..+.+
T Consensus 91 ~~~~~h~~~v~~ 102 (304)
T 2ynn_A 91 VDFEAHPDYIRS 102 (304)
T ss_dssp EEEECCSSCEEE
T ss_pred EEEeCCCCcEEE
Confidence 999999887643
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.77 E-value=3.9e-18 Score=114.16 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=78.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|+++|++++|+|++.+||+|+.||.|++||..+++....+.+|...|.+ ++|++|+.|++|+|||+.+++.+
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI 185 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 57889999999999999999999999999999999999999999998887 79999999999999999999999
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
..+.+|...+.+
T Consensus 186 ~~~~~h~~~V~~ 197 (410)
T 1vyh_C 186 RTMHGHDHNVSS 197 (410)
T ss_dssp ECCCCCSSCEEE
T ss_pred EEEcCCCCCEEE
Confidence 999999877653
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.77 E-value=5.1e-18 Score=116.08 Aligned_cols=82 Identities=17% Similarity=0.262 Sum_probs=74.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|.++|++++|||||++||+|+.|+.|+|||. +++.+..+.+|...|.+ ++||+++.|++|+|||. +++.+
T Consensus 14 GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~ 91 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLL 91 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEE
Confidence 58899999999999999999999999999995 67888999999999987 79999999999999996 56777
Q ss_pred eeeCCCCCCCc
Q psy12376 75 PVLGKHTKSKP 85 (89)
Q Consensus 75 ~~l~~h~~~~~ 85 (89)
..+.+|...+.
T Consensus 92 ~~~~~~~~~v~ 102 (577)
T 2ymu_A 92 QTLTGHSSSVR 102 (577)
T ss_dssp EEECCCSSCEE
T ss_pred EEEECCCCCEE
Confidence 88889987654
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.76 E-value=9.1e-18 Score=110.85 Aligned_cols=77 Identities=9% Similarity=0.136 Sum_probs=70.5
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|.+.|++++|+|||++||+|+.||.|++||+++++.+..+.+|...|.+ .+|++|+.|++|+|||+++++.
T Consensus 125 ~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 125 EHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP 204 (344)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce
Confidence 57788999999999999999999999999999999999999999998877 5799999999999999998877
Q ss_pred EeeeC
Q psy12376 74 VPVLG 78 (89)
Q Consensus 74 ~~~l~ 78 (89)
...+.
T Consensus 205 ~~~~~ 209 (344)
T 4gqb_B 205 ASQIG 209 (344)
T ss_dssp EEECC
T ss_pred eeeee
Confidence 66654
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.76 E-value=1.3e-17 Score=108.75 Aligned_cols=84 Identities=15% Similarity=0.158 Sum_probs=77.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|..+|++++|+|++++|++|+.||.|++||.++++....+.+|...|.+ ++|++|+.|++|+|||+++++.+
T Consensus 204 ~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 204 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 36678999999999999999999999999999999999999999998876 79999999999999999999999
Q ss_pred eeeCCCCCCCc
Q psy12376 75 PVLGKHTKSKP 85 (89)
Q Consensus 75 ~~l~~h~~~~~ 85 (89)
..+.+|...+.
T Consensus 284 ~~~~~h~~~v~ 294 (321)
T 3ow8_A 284 HTFFDHQDQVW 294 (321)
T ss_dssp EEECCCSSCEE
T ss_pred EEEcCCCCcEE
Confidence 99999987754
No 6
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.75 E-value=1.3e-17 Score=110.47 Aligned_cols=68 Identities=10% Similarity=0.099 Sum_probs=62.5
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe-cCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL-GKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~-~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
+|...|++++|||||++||+|+.|+.|+|||+++++.+..+ .+|..+|.+ ++|||||.|++|+|||+.
T Consensus 267 ~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 267 NRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 35667999999999999999999999999999999988875 789999987 899999999999999995
No 7
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.74 E-value=1.6e-17 Score=107.79 Aligned_cols=85 Identities=14% Similarity=0.153 Sum_probs=70.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe--EeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK--RVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~--~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~ 70 (89)
+|.+.|++++|+|+|++||+|+.|++|++||+++++ .+..+.+|...|.+ ++|++|+.|++|+|||+++
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 578899999999999999999999999999998765 45678899998876 5899999999999999987
Q ss_pred C--EEEeeeCCCCCCCcC
Q psy12376 71 S--KRVPVLGKHTKSKPS 86 (89)
Q Consensus 71 ~--~~~~~l~~h~~~~~~ 86 (89)
+ .....+.+|...+.+
T Consensus 91 ~~~~~~~~~~~h~~~V~~ 108 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNS 108 (316)
T ss_dssp SCCCEEEEECCCSSCCCE
T ss_pred CcceEEEEccCCCCceEE
Confidence 6 355677888877653
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.74 E-value=5e-17 Score=105.95 Aligned_cols=83 Identities=22% Similarity=0.313 Sum_probs=75.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+...+.+++|+|+|++||+|+.||.|++||+++++.+..+.+|..+|.+ ++|++|+.|++|+|||++++....
T Consensus 163 ~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 163 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE
T ss_pred CCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE
Confidence 3456899999999999999999999999999999999999999988876 799999999999999999998888
Q ss_pred eeCCCCCCCc
Q psy12376 76 VLGKHTKSKP 85 (89)
Q Consensus 76 ~l~~h~~~~~ 85 (89)
.+.+|...+.
T Consensus 243 ~~~~h~~~v~ 252 (321)
T 3ow8_A 243 TLSGHASWVL 252 (321)
T ss_dssp EECCCSSCEE
T ss_pred EEcCCCCceE
Confidence 9999987754
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.74 E-value=5e-17 Score=104.37 Aligned_cols=84 Identities=15% Similarity=0.162 Sum_probs=77.1
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|.+.|++++|+|+|++||+++.||.|++|+..+++....+.+|...|.+ ++|++|+.|+.|++||+++++.+
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL 100 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 57788999999999999999999999999999999988899999988876 79999999999999999999988
Q ss_pred eeeCCCCCCCc
Q psy12376 75 PVLGKHTKSKP 85 (89)
Q Consensus 75 ~~l~~h~~~~~ 85 (89)
..+.+|...+.
T Consensus 101 ~~~~~~~~~v~ 111 (312)
T 4ery_A 101 KTLKGHSNYVF 111 (312)
T ss_dssp EEEECCSSCEE
T ss_pred EEEcCCCCCEE
Confidence 88888887653
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.74 E-value=6.2e-17 Score=105.10 Aligned_cols=83 Identities=10% Similarity=0.099 Sum_probs=74.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...|.+++|+|+|++|++|+.||.|++||+.+++.+..+.+|...|.+ ++|++|+.|++|++||++ +...
T Consensus 63 ~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~ 141 (319)
T 3frx_A 63 GHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCL 141 (319)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEE
T ss_pred CCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeE
Confidence 47788999999999999999999999999999999999999999998887 799999999999999997 4566
Q ss_pred eeeCCCCCCCc
Q psy12376 75 PVLGKHTKSKP 85 (89)
Q Consensus 75 ~~l~~h~~~~~ 85 (89)
..+.+|...+.
T Consensus 142 ~~~~~h~~~v~ 152 (319)
T 3frx_A 142 ATLLGHNDWVS 152 (319)
T ss_dssp EEECCCSSCEE
T ss_pred EEEeccCCcEE
Confidence 77778876543
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.73 E-value=2.6e-17 Score=105.86 Aligned_cols=84 Identities=14% Similarity=0.212 Sum_probs=71.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC--CeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT--SKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~--~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~ 70 (89)
+|.+.|++++|+|+|++||+|+.|+.|+|||..+ ++.+..+.+|..+|.+ ++|++|+.|++|+|||+++
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 5788999999999999999999999999999864 3567889999998876 5899999999999999987
Q ss_pred CE--EEeeeCCCCCCCc
Q psy12376 71 SK--RVPVLGKHTKSKP 85 (89)
Q Consensus 71 ~~--~~~~l~~h~~~~~ 85 (89)
+. ....+.+|...+.
T Consensus 87 ~~~~~~~~~~~h~~~v~ 103 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVN 103 (297)
T ss_dssp SCBCCCEEECCCSSCEE
T ss_pred CceEEEEEeecCCCcee
Confidence 63 4455677876654
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.73 E-value=4.8e-17 Score=104.92 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=75.1
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC-EEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS-KRV 74 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~-~~~ 74 (89)
|..++.+++|+|++++|++|+.|+.|++||..+++.+..+.+|...|.+ ++|++|+.|++|++||++++ ...
T Consensus 54 ~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~ 133 (304)
T 2ynn_A 54 TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE 133 (304)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE
T ss_pred cCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh
Confidence 5667999999999999999999999999999999999999999998887 79999999999999999866 566
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
..+.+|...+.+
T Consensus 134 ~~~~~h~~~v~~ 145 (304)
T 2ynn_A 134 QTFEGHEHFVMC 145 (304)
T ss_dssp EEECCCCSCEEE
T ss_pred hhhcccCCcEEE
Confidence 778889876543
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.73 E-value=1.1e-16 Score=102.84 Aligned_cols=84 Identities=15% Similarity=0.222 Sum_probs=76.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...|.+++|+|++++|++++.||.|++||.++++.+..+.+|...|.+ ++|++|+.|+.|++||+++++..
T Consensus 63 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 63 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL 142 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE
Confidence 46678999999999999999999999999999999999999999998876 79999999999999999999988
Q ss_pred eeeCCCCCCCc
Q psy12376 75 PVLGKHTKSKP 85 (89)
Q Consensus 75 ~~l~~h~~~~~ 85 (89)
..+..|...+.
T Consensus 143 ~~~~~~~~~v~ 153 (312)
T 4ery_A 143 KTLPAHSDPVS 153 (312)
T ss_dssp EEECCCSSCEE
T ss_pred EEecCCCCcEE
Confidence 88888887654
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.72 E-value=4.5e-17 Score=109.04 Aligned_cols=84 Identities=10% Similarity=0.128 Sum_probs=77.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|.+.|++++|+|+|++||+|+.||.|++||..+++.+..+.+|...|.+ ++|++|+.|++|++||++++...
T Consensus 148 ~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV 227 (410)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 47788999999999999999999999999999999999999999998887 78999999999999999999998
Q ss_pred eeeCCCCCCCc
Q psy12376 75 PVLGKHTKSKP 85 (89)
Q Consensus 75 ~~l~~h~~~~~ 85 (89)
..+.+|...+.
T Consensus 228 ~~~~~h~~~v~ 238 (410)
T 1vyh_C 228 KTFTGHREWVR 238 (410)
T ss_dssp EEEECCSSCEE
T ss_pred EEEeCCCccEE
Confidence 88888887643
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.72 E-value=1.7e-16 Score=104.55 Aligned_cols=84 Identities=10% Similarity=0.176 Sum_probs=76.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~~~~ 73 (89)
|.+.|.+++|+|++..|++++.||.|++||+++++.+..+.+|...|.+ ++|++|+.|++|++||+++++.
T Consensus 153 h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 153 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC 232 (354)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE
T ss_pred cCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 6677999999999999999999999999999999999999999987765 5899999999999999999999
Q ss_pred EeeeCCCCCCCcC
Q psy12376 74 VPVLGKHTKSKPS 86 (89)
Q Consensus 74 ~~~l~~h~~~~~~ 86 (89)
...+.+|...+.+
T Consensus 233 ~~~~~~h~~~v~~ 245 (354)
T 2pbi_B 233 VQAFETHESDVNS 245 (354)
T ss_dssp EEEECCCSSCEEE
T ss_pred EEEecCCCCCeEE
Confidence 9999999887653
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.5e-16 Score=103.69 Aligned_cols=84 Identities=15% Similarity=0.166 Sum_probs=69.5
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC----CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT----SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~----~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
+|.+.|++++|+|+|++||+|+.|+.|++||.+. .+.+..+.+|...|.+ ++|++|+.|++|+|||+.+
T Consensus 105 ~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp ----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 4677899999999999999999999999999943 2456778899988876 7999999999999999976
Q ss_pred C--EEEeeeCCCCCCCc
Q psy12376 71 S--KRVPVLGKHTKSKP 85 (89)
Q Consensus 71 ~--~~~~~l~~h~~~~~ 85 (89)
+ +.+..+.+|...+.
T Consensus 185 ~~~~~~~~~~~h~~~v~ 201 (330)
T 2hes_X 185 DDWECVAVLNGHEGTVW 201 (330)
T ss_dssp TEEEEEEEECCCSSCEE
T ss_pred CCeeEEEEccCCCCcEE
Confidence 6 56778889987754
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.71 E-value=1.1e-16 Score=103.97 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=74.5
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCC-----CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMT-----SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~-----~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~ 68 (89)
+|.++|++++|+|++ ++|++|+.|++|++|+... +..+..+.+|...|.+ ++|++|+.|++|+|||+
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~ 94 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDV 94 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 588899999999965 8999999999999999753 3346778899998876 79999999999999999
Q ss_pred CCCEEEeeeCCCCCCCcC
Q psy12376 69 MTSKRVPVLGKHTKSKPS 86 (89)
Q Consensus 69 ~~~~~~~~l~~h~~~~~~ 86 (89)
++++....+.+|...+.+
T Consensus 95 ~~~~~~~~~~~h~~~v~~ 112 (319)
T 3frx_A 95 ATGETYQRFVGHKSDVMS 112 (319)
T ss_dssp TTTEEEEEEECCSSCEEE
T ss_pred CCCCeeEEEccCCCcEEE
Confidence 999999999999887654
No 18
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.70 E-value=3.8e-16 Score=99.47 Aligned_cols=84 Identities=11% Similarity=0.140 Sum_probs=72.5
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC----eEeeEecCCcceeec---------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS----KRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~----~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~ 68 (89)
+|.+.|++++|+|+|++||+|+.||.|++||..++ +....+.+|...|.+ ++|++|+.|+.|++||+
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~ 88 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEE 88 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEec
Confidence 58889999999999999999999999999999875 456677889988876 58999999999999999
Q ss_pred CCC---------EEEeeeCCCCCCCc
Q psy12376 69 MTS---------KRVPVLGKHTKSKP 85 (89)
Q Consensus 69 ~~~---------~~~~~l~~h~~~~~ 85 (89)
+++ +....+..|...+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTLNDSKGSLY 114 (351)
T ss_dssp CTTSCTTSSCSEEEEEEECCCSSCEE
T ss_pred CCCcccccccCcceeeeecccCCcee
Confidence 876 56677788877654
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.70 E-value=3.6e-16 Score=100.85 Aligned_cols=81 Identities=15% Similarity=0.208 Sum_probs=72.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|.+.|++++|+|+|++|++++.||.|++||..+++.+..+.+|...|.+ ++|++++.|+.|++||+.+++..
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV 109 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 57889999999999999999999999999999999999999999998877 79999999999999999988877
Q ss_pred eeeCCCCCC
Q psy12376 75 PVLGKHTKS 83 (89)
Q Consensus 75 ~~l~~h~~~ 83 (89)
..+. |...
T Consensus 110 ~~~~-~~~~ 117 (369)
T 3zwl_B 110 ATWK-SPVP 117 (369)
T ss_dssp EEEE-CSSC
T ss_pred EEee-cCCC
Confidence 7665 4433
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.70 E-value=4.5e-16 Score=101.94 Aligned_cols=84 Identities=19% Similarity=0.216 Sum_probs=71.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC--eEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC-
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS--KRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS- 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~--~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~- 71 (89)
+|.+.|++++|+|+|++||+|+.|+.+++||...+ +.+..+.+|...|.+ ++|++|+.|++|++||++++
T Consensus 59 ~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~ 138 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138 (345)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS
T ss_pred ccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC
Confidence 47788999999999999999999999999998765 456788899998887 79999999999999999765
Q ss_pred --EEEeeeCCCCCCCc
Q psy12376 72 --KRVPVLGKHTKSKP 85 (89)
Q Consensus 72 --~~~~~l~~h~~~~~ 85 (89)
.....+.+|...+.
T Consensus 139 ~~~~~~~~~~h~~~v~ 154 (345)
T 3fm0_A 139 EYECVSVLNSHTQDVK 154 (345)
T ss_dssp CEEEEEEECCCCSCEE
T ss_pred CeEEEEEecCcCCCeE
Confidence 34566788877653
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.70 E-value=2.7e-16 Score=102.74 Aligned_cols=85 Identities=11% Similarity=0.085 Sum_probs=74.4
Q ss_pred CcCCcEEEEEE-----cc-CCCEEEEEeCCCcEEEEeCCCC-------eEeeEecCCcceeec-------cEEEEEeCCC
Q psy12376 2 NLRYYIFLLQT-----SQ-VGQVLAIGTARGNLTVYNHMTS-------KRVPVLGKHTNTIVG-------QVLAIGTARG 61 (89)
Q Consensus 2 ~~~~~i~~~~~-----sp-dg~~la~g~~~g~v~iwd~~~~-------~~~~~~~~h~~~i~~-------~~las~s~d~ 61 (89)
+|.++|++++| +| |+++||+|+.|++|++||...+ .....+.+|...|.+ .++++|+.|+
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~ 98 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDK 98 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTS
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCC
Confidence 58889999999 77 9999999999999999998643 345678899998877 7899999999
Q ss_pred CEEEEeCCCCEEEeeeCCCCCCCcC
Q psy12376 62 NLTVYNHMTSKRVPVLGKHTKSKPS 86 (89)
Q Consensus 62 ~v~iwd~~~~~~~~~l~~h~~~~~~ 86 (89)
+|++||+++++....+.+|...+.+
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~ 123 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYS 123 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEE
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEE
Confidence 9999999999988889999887643
No 22
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.69 E-value=1.9e-16 Score=104.51 Aligned_cols=82 Identities=9% Similarity=0.065 Sum_probs=71.1
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE----ecCCcceeec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV----LGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~----~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
...|++++|+||+ .|++|+.||.|+|||+.+++.+.. +.+|...|.+ ++|++|+.|++|+|||+++++
T Consensus 82 ~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 82 EAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV 160 (344)
T ss_dssp SSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4569999999995 788999999999999998865433 4489998887 799999999999999999999
Q ss_pred EEeeeCCCCCCCcC
Q psy12376 73 RVPVLGKHTKSKPS 86 (89)
Q Consensus 73 ~~~~l~~h~~~~~~ 86 (89)
.+..+.+|...+.+
T Consensus 161 ~~~~~~~h~~~V~~ 174 (344)
T 4gqb_B 161 VLSSYRAHAAQVTC 174 (344)
T ss_dssp EEEEECCCSSCEEE
T ss_pred EEEEEcCcCCceEE
Confidence 99999999987643
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.69 E-value=1.1e-15 Score=99.64 Aligned_cols=83 Identities=14% Similarity=0.214 Sum_probs=66.1
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC-------CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT-------SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~-------~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~ 68 (89)
|...|.+++|+|++++||+|+.|+.|++||... .+.+..+.+|...|.+ ++||+|+.|++|+|||+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 778899999999999999999999999999843 3456778899998887 79999999999999999
Q ss_pred CC----CEEEeeeCCCCCCCc
Q psy12376 69 MT----SKRVPVLGKHTKSKP 85 (89)
Q Consensus 69 ~~----~~~~~~l~~h~~~~~ 85 (89)
+. .+.+..+.+|...+.
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEE
T ss_pred cCCCCCeEEEEEeccCCCceE
Confidence 42 256677888987654
No 24
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.68 E-value=3.2e-16 Score=101.55 Aligned_cols=84 Identities=17% Similarity=0.226 Sum_probs=73.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCC--CCeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHM--TSKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~--~~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~ 70 (89)
+|.+.|++++|+|+|++||+|+.||.|++||.. +++.+..+.+|...|.+ ++|++|+.|+.|++||+++
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence 478899999999999999999999999999997 56677788899988876 6899999999999999998
Q ss_pred CE--EEeeeCCCCCCCc
Q psy12376 71 SK--RVPVLGKHTKSKP 85 (89)
Q Consensus 71 ~~--~~~~l~~h~~~~~ 85 (89)
++ ....+..|...+.
T Consensus 89 ~~~~~~~~~~~~~~~v~ 105 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVN 105 (379)
T ss_dssp TEEEEEEEECCCSSCEE
T ss_pred CceeEeeeecCCCcceE
Confidence 86 6667777876654
No 25
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.68 E-value=1e-15 Score=101.11 Aligned_cols=80 Identities=13% Similarity=0.151 Sum_probs=73.3
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
.|...|++++|+|++++|++++.||.|++||+++++.+..+.+|...|.+ ++|++++.|+.|++||+++++..
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCcee
Confidence 47788999999999999999999999999999999988999999998887 78999999999999999999988
Q ss_pred eeeCCCC
Q psy12376 75 PVLGKHT 81 (89)
Q Consensus 75 ~~l~~h~ 81 (89)
..+..|.
T Consensus 217 ~~~~~~~ 223 (420)
T 3vl1_A 217 HTFNRKE 223 (420)
T ss_dssp EEECBTT
T ss_pred EEeecCC
Confidence 8887544
No 26
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.68 E-value=1.8e-15 Score=98.84 Aligned_cols=77 Identities=8% Similarity=0.144 Sum_probs=70.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...|.+++|+|++++|++|+.||.|++||+++++.+..+.+|...|.+ ++|++|+.|++|++||+++++..
T Consensus 182 ~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 46778999999999999999999999999999999999999999998876 79999999999999999988776
Q ss_pred eeeC
Q psy12376 75 PVLG 78 (89)
Q Consensus 75 ~~l~ 78 (89)
..+.
T Consensus 262 ~~~~ 265 (340)
T 1got_B 262 MTYS 265 (340)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6554
No 27
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.68 E-value=1.1e-15 Score=99.83 Aligned_cols=84 Identities=17% Similarity=0.232 Sum_probs=73.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC---
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS--- 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~--- 71 (89)
+|.++|++++|+|||++|++|+.||.|++||..+++.+..+..|...|.+ ++|++|+.|+.+++||+.++
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~ 132 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc
Confidence 57889999999999999999999999999999999988888889888776 79999999999999999764
Q ss_pred -EEEeeeCCCCCCCc
Q psy12376 72 -KRVPVLGKHTKSKP 85 (89)
Q Consensus 72 -~~~~~l~~h~~~~~ 85 (89)
.....+.+|...+.
T Consensus 133 ~~~~~~~~~h~~~v~ 147 (340)
T 1got_B 133 VRVSRELAGHTGYLS 147 (340)
T ss_dssp CEEEEEEECCSSCEE
T ss_pred ceeEEEecCCCccEE
Confidence 34556778876654
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.68 E-value=7e-16 Score=102.54 Aligned_cols=85 Identities=12% Similarity=0.201 Sum_probs=71.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC------------eEeeEecCCcceeec-------cEEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS------------KRVPVLGKHTNTIVG-------QVLAIGTARGN 62 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~------------~~~~~~~~h~~~i~~-------~~las~s~d~~ 62 (89)
+|.+.|++++|+|+|++|++|+.||.|++||+++. .....+.+|...|.+ .+|++|+.|+.
T Consensus 254 ~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~ 333 (393)
T 1erj_A 254 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 333 (393)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe
Confidence 46778999999999999999999999999998753 234566788887765 79999999999
Q ss_pred EEEEeCCCCEEEeeeCCCCCCCcC
Q psy12376 63 LTVYNHMTSKRVPVLGKHTKSKPS 86 (89)
Q Consensus 63 v~iwd~~~~~~~~~l~~h~~~~~~ 86 (89)
|++||+++++.+..+.+|...+.+
T Consensus 334 v~iwd~~~~~~~~~l~~h~~~v~~ 357 (393)
T 1erj_A 334 VLFWDKKSGNPLLMLQGHRNSVIS 357 (393)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEEEECCCCeEEEEECCCCCCEEE
Confidence 999999999998999999887643
No 29
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.67 E-value=1.2e-15 Score=101.11 Aligned_cols=84 Identities=18% Similarity=0.140 Sum_probs=74.6
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCC-------eEeeEecCCcceeec--------cEEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTS-------KRVPVLGKHTNTIVG--------QVLAIGTARGNLTV 65 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~-------~~~~~~~~h~~~i~~--------~~las~s~d~~v~i 65 (89)
+|.+.|++++|+| ++++||+|+.||.|++||+.++ +.+..+.+|...|.+ ++|++++.|+.|+|
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 158 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILV 158 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEE
T ss_pred cCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEE
Confidence 4778899999999 9999999999999999999887 556788899998877 48999999999999
Q ss_pred EeCCCCEEEeee--CCCCCCCc
Q psy12376 66 YNHMTSKRVPVL--GKHTKSKP 85 (89)
Q Consensus 66 wd~~~~~~~~~l--~~h~~~~~ 85 (89)
||+++++....+ ..|...+.
T Consensus 159 wd~~~~~~~~~~~~~~~~~~v~ 180 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHPDTIY 180 (402)
T ss_dssp EETTTTEEEEEECTTTCCSCEE
T ss_pred EECCCCCccEEEecCCCCCceE
Confidence 999999998888 78887654
No 30
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.67 E-value=8.7e-16 Score=100.59 Aligned_cols=85 Identities=14% Similarity=0.162 Sum_probs=71.0
Q ss_pred CcCC-cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEee---EecCCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRY-YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVP---VLGKHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~-~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~---~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
+|++ .+++++|+|+|++||+|+.||.|+|||..+++... ...+|...|.+ ++|++|+.|++++|||+..
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 4666 79999999999999999999999999998876432 23689988887 7999999999999999976
Q ss_pred C--EEEeeeCCCCCCCcC
Q psy12376 71 S--KRVPVLGKHTKSKPS 86 (89)
Q Consensus 71 ~--~~~~~l~~h~~~~~~ 86 (89)
+ +....+.+|...+.+
T Consensus 93 ~~~~~~~~~~~h~~~v~~ 110 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKS 110 (345)
T ss_dssp C-EEEEEEECCCSSCEEE
T ss_pred CCeEEEEEccCCCCCceE
Confidence 5 456778899887643
No 31
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.67 E-value=3.4e-16 Score=103.65 Aligned_cols=85 Identities=19% Similarity=0.238 Sum_probs=72.5
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCE--
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSK-- 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~-- 72 (89)
+|.++|++++|+|+|++||+|+.||+|++||..+++....+..|...|.+ ++|++|+.|+.++|||+.+..
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR 143 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC
T ss_pred ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc
Confidence 57889999999999999999999999999999999999999999887765 899999999999999996432
Q ss_pred -----EEeeeCCCCCCCcC
Q psy12376 73 -----RVPVLGKHTKSKPS 86 (89)
Q Consensus 73 -----~~~~l~~h~~~~~~ 86 (89)
....+.+|...+.+
T Consensus 144 ~~~~~~~~~~~gh~~~v~~ 162 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGYASS 162 (380)
T ss_dssp CCSSTTCCBCCCCSSCCCC
T ss_pred cCCccceeeccCCCcceEE
Confidence 22346677766543
No 32
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.67 E-value=9e-16 Score=101.07 Aligned_cols=70 Identities=14% Similarity=0.209 Sum_probs=64.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCc-EEEEeCCCCeEeeEec-C-Ccceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGN-LTVYNHMTSKRVPVLG-K-HTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~-v~iwd~~~~~~~~~~~-~-h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
+|.++|++++|+|||++||+|+.||+ |++||.++++.+..+. + |...|.+ ++|++++.|++|+|||++.+
T Consensus 193 ~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 193 AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 47788999999999999999999998 9999999999998887 5 8888877 79999999999999999754
No 33
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.67 E-value=1.6e-15 Score=99.09 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=65.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|...|++++|+|++.+|++|+.||.|++||.++++.+..+.+|...|.+ ++|++++.|++|++||+.....
T Consensus 74 ~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~ 152 (343)
T 2xzm_R 74 GHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK 152 (343)
T ss_dssp CCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce
Confidence 47788999999999999999999999999999999999999999998887 7999999999999999974433
No 34
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.66 E-value=7.9e-16 Score=101.51 Aligned_cols=76 Identities=9% Similarity=0.114 Sum_probs=68.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|.+.|++++|+|+|++|++|+.||.|++||.++++.+..+.+|...|.+ .++++++.|+.|+|||+++++.
T Consensus 137 ~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 137 EHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP 216 (357)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce
Confidence 46788999999999999999999999999999999999999999998876 5899999999999999988776
Q ss_pred Eeee
Q psy12376 74 VPVL 77 (89)
Q Consensus 74 ~~~l 77 (89)
...+
T Consensus 217 ~~~~ 220 (357)
T 4g56_B 217 ATRI 220 (357)
T ss_dssp BCBC
T ss_pred eeee
Confidence 5544
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.66 E-value=2.6e-15 Score=99.83 Aligned_cols=73 Identities=22% Similarity=0.296 Sum_probs=67.3
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
.|++++|+|||++||+|+.||.|++||+.+++.+..+.+|...|.+ ++|++|+.|++|++||+++++....+.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 4899999999999999999999999999999999999999998877 799999999999999999988776654
No 36
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.66 E-value=1.1e-15 Score=107.97 Aligned_cols=85 Identities=14% Similarity=0.126 Sum_probs=77.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|.+.|++++|||+|++||+++.+|.|.+||..+++.+..+.+|..+|.+ ++|++++.|+.|++||+.+++..
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 46788999999999999999999999999999999999999999998887 79999999999999999999998
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
..+.+|...+.+
T Consensus 91 ~~~~~~~~~v~~ 102 (814)
T 3mkq_A 91 VDFEAHPDYIRS 102 (814)
T ss_dssp EEEECCSSCEEE
T ss_pred EEEecCCCCEEE
Confidence 989889877543
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.65 E-value=1.4e-15 Score=100.29 Aligned_cols=83 Identities=17% Similarity=0.127 Sum_probs=71.7
Q ss_pred cCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 3 LRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 3 ~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+...+++++|+|++ .+||+|+.|+.|++||+++++.+..+.+|...|.+ ++||+|+.|++|+|||+++++.
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV 304 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE
T ss_pred ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 34568999999974 68999999999999999999999999999988876 5899999999999999999888
Q ss_pred EeeeCCCCCCCcC
Q psy12376 74 VPVLGKHTKSKPS 86 (89)
Q Consensus 74 ~~~l~~h~~~~~~ 86 (89)
...+ +|...+.+
T Consensus 305 ~~~~-~H~~~V~~ 316 (357)
T 4g56_B 305 FRDL-SHRDFVTG 316 (357)
T ss_dssp EEEC-CCSSCEEE
T ss_pred eEEC-CCCCCEEE
Confidence 7655 68877543
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.65 E-value=1.9e-15 Score=101.51 Aligned_cols=79 Identities=11% Similarity=0.086 Sum_probs=63.8
Q ss_pred cCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeE--eeEecCCcceeec--------cEEEEEeCCCCEEEEeCCCC
Q psy12376 3 LRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKR--VPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 3 ~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~--~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~~ 71 (89)
|...|++|+|+| ++.+||+|+.||.|+|||..+++. ...+.+|.+.|.+ ++|++|+.|++|+|||++++
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 456799999999 567999999999999999987654 3345689988876 69999999999999999876
Q ss_pred EEEeeeCCCC
Q psy12376 72 KRVPVLGKHT 81 (89)
Q Consensus 72 ~~~~~l~~h~ 81 (89)
........|.
T Consensus 198 ~~~~~~~~~~ 207 (435)
T 4e54_B 198 ILRVFASSDT 207 (435)
T ss_dssp EEEEEECCSS
T ss_pred ceeEEeccCC
Confidence 6555444443
No 39
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.65 E-value=1.7e-15 Score=111.41 Aligned_cols=84 Identities=19% Similarity=0.236 Sum_probs=78.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|.+.|++++|||||++||+|+.||.|++||..+++.+..+.+|...|.+ ++|++++.|++|+|||+.+++..
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV 692 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceE
Confidence 47788999999999999999999999999999999999999999999887 79999999999999999999999
Q ss_pred eeeCCCCCCCc
Q psy12376 75 PVLGKHTKSKP 85 (89)
Q Consensus 75 ~~l~~h~~~~~ 85 (89)
..+.+|...+.
T Consensus 693 ~~~~~~~~~v~ 703 (1249)
T 3sfz_A 693 HTYDEHSEQVN 703 (1249)
T ss_dssp EEEECCSSCEE
T ss_pred EEEcCCCCcEE
Confidence 98888887654
No 40
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.65 E-value=2.8e-15 Score=104.59 Aligned_cols=78 Identities=17% Similarity=0.320 Sum_probs=69.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec-------CCcceeec-------cEEEEEeCCCCEEEEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG-------KHTNTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~-------~h~~~i~~-------~~las~s~d~~v~iwd 67 (89)
+|.+.|++++|+|||++||+++.||.|++||..+++.+..+. +|.+.|.+ ++|++++.|++|+|||
T Consensus 188 ~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 188 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 267 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 477889999999999999999999999999999998887774 79888876 7999999999999999
Q ss_pred CCCCEEEeeeCC
Q psy12376 68 HMTSKRVPVLGK 79 (89)
Q Consensus 68 ~~~~~~~~~l~~ 79 (89)
+++++....+..
T Consensus 268 ~~~~~~~~~~~~ 279 (611)
T 1nr0_A 268 VATLKVEKTIPV 279 (611)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCceeeeecC
Confidence 999888776643
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.65 E-value=2.3e-15 Score=105.03 Aligned_cols=84 Identities=14% Similarity=0.214 Sum_probs=74.7
Q ss_pred CcCCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
+|.+.|++++|+|++. .|++|+.|+.|++||..+++....+.+|...|.+ ++||+|+.|++|+|||+.+++.
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 224 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE
Confidence 4677899999999987 6999999999999999999988999999998887 7999999999999999998888
Q ss_pred EeeeC-------CCCCCCc
Q psy12376 74 VPVLG-------KHTKSKP 85 (89)
Q Consensus 74 ~~~l~-------~h~~~~~ 85 (89)
...+. +|...+.
T Consensus 225 ~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 225 TGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp EEECBCTTSSSCSSSSCEE
T ss_pred eeeeccccccccccCCCEE
Confidence 77773 6877654
No 42
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.65 E-value=1.6e-15 Score=103.70 Aligned_cols=82 Identities=17% Similarity=0.250 Sum_probs=73.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...|++++|+|||++||+++.|+.|++||. +++.+..+.+|...|.+ ++||+++.|+.|+|||. +++.+
T Consensus 465 ~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~ 542 (577)
T 2ymu_A 465 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLL 542 (577)
T ss_dssp CCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEE
Confidence 46778999999999999999999999999995 67888899999998876 79999999999999996 67888
Q ss_pred eeeCCCCCCCc
Q psy12376 75 PVLGKHTKSKP 85 (89)
Q Consensus 75 ~~l~~h~~~~~ 85 (89)
..+.+|+..+.
T Consensus 543 ~~~~~h~~~v~ 553 (577)
T 2ymu_A 543 QTLTGHSSSVW 553 (577)
T ss_dssp EEEECCSSCEE
T ss_pred EEEcCCCCCEE
Confidence 88999988764
No 43
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.64 E-value=3.1e-15 Score=99.07 Aligned_cols=85 Identities=16% Similarity=0.263 Sum_probs=70.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc-------eeec-------cEEEEEeCCCCEEEEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN-------TIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~-------~i~~-------~~las~s~d~~v~iwd 67 (89)
+|...|++++|+|+|++|++|+.||.|++||+++++.+..+..+.. .+.+ ++|++|+.|+.|++||
T Consensus 247 ~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd 326 (380)
T 3iz6_a 247 GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWD 326 (380)
T ss_dssp CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEE
T ss_pred CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEE
Confidence 4677899999999999999999999999999999988877765422 2332 8999999999999999
Q ss_pred CCCCEEEeee----CCCCCCCcC
Q psy12376 68 HMTSKRVPVL----GKHTKSKPS 86 (89)
Q Consensus 68 ~~~~~~~~~l----~~h~~~~~~ 86 (89)
+..++....+ .+|...+.+
T Consensus 327 ~~~~~~~~~~~~~~~~h~~~v~~ 349 (380)
T 3iz6_a 327 TLLAEMVLNLGTLQNSHEGRISC 349 (380)
T ss_dssp TTTCCEEEEECCSCSSCCCCCCE
T ss_pred CCCCceEEEEecccCCCCCceEE
Confidence 9888877666 578877654
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.64 E-value=5e-15 Score=98.93 Aligned_cols=82 Identities=20% Similarity=0.323 Sum_probs=72.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCC-CEEEee
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMT-SKRVPV 76 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~-~~~~~~ 76 (89)
|.+.|++|+|+|||++||+|+.||.|++||..+++.+..+.+|...+.+ .+|++|+.|+.+.+||... ......
T Consensus 146 ~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~ 225 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVAT 225 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEE
Confidence 5567999999999999999999999999999999999999999998887 8999999999999999975 455566
Q ss_pred eCCCCCCC
Q psy12376 77 LGKHTKSK 84 (89)
Q Consensus 77 l~~h~~~~ 84 (89)
+.+|...+
T Consensus 226 ~~~h~~~~ 233 (420)
T 4gga_A 226 LSGHSQEV 233 (420)
T ss_dssp EECCSSCE
T ss_pred ecccccce
Confidence 77777654
No 45
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.64 E-value=4.3e-15 Score=98.93 Aligned_cols=83 Identities=13% Similarity=0.157 Sum_probs=73.1
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec-CCcceeec-----------cEEEEEeCCCCEEEEeCCC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG-KHTNTIVG-----------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~-~h~~~i~~-----------~~las~s~d~~v~iwd~~~ 70 (89)
|...|++++|+|++++|++|+.||.|++||+++++.+..+. +|..+|.+ .+|++|+.|+.|+|||+++
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 56789999999999999999999999999999999888876 67777665 4999999999999999999
Q ss_pred CEEEeeeCCCCCCCc
Q psy12376 71 SKRVPVLGKHTKSKP 85 (89)
Q Consensus 71 ~~~~~~l~~h~~~~~ 85 (89)
++....+.+|...+.
T Consensus 293 ~~~~~~~~~~~~~~~ 307 (437)
T 3gre_A 293 GHCQYAFINSDEQPS 307 (437)
T ss_dssp TEEEEEEESSSSCCC
T ss_pred CcEEEEEEcCCCCCc
Confidence 999888888765543
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.64 E-value=5.8e-15 Score=94.70 Aligned_cols=81 Identities=14% Similarity=0.199 Sum_probs=68.8
Q ss_pred CcCCcEEEEEEccC-CCEEEEEeCCCcEEEEeCCCCe-----EeeEecCCcceeec-------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQV-GQVLAIGTARGNLTVYNHMTSK-----RVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~spd-g~~la~g~~~g~v~iwd~~~~~-----~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~ 68 (89)
+|.+.|++|+|+|+ +++||+|+.||+|+|||+.+++ ....+.+|...|.+ ++|++++.|+.|++|+.
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~ 115 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDL 115 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEee
Confidence 58899999999998 6899999999999999987543 45678899998887 79999999999999999
Q ss_pred CCCEEEeeeCCCCC
Q psy12376 69 MTSKRVPVLGKHTK 82 (89)
Q Consensus 69 ~~~~~~~~l~~h~~ 82 (89)
...........+..
T Consensus 116 ~~~~~~~~~~~~~~ 129 (340)
T 4aow_A 116 TTGTTTRRFVGHTK 129 (340)
T ss_dssp TTTEEEEEEECCSS
T ss_pred cccceeeeecCCCC
Confidence 88877766655443
No 47
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.63 E-value=9.7e-15 Score=96.09 Aligned_cols=85 Identities=15% Similarity=0.244 Sum_probs=72.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCc--ceeec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHT--NTIVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~--~~i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
.|...|.+++|+|+|.+||+|+.|+.|++||++.++.+..+..+. ..+.+ .+|++|+.|++|+|||+.++.
T Consensus 238 ~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 238 THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 467789999999999999999999999999999988777665432 23333 799999999999999999898
Q ss_pred EEeeeCCCCCCCcC
Q psy12376 73 RVPVLGKHTKSKPS 86 (89)
Q Consensus 73 ~~~~l~~h~~~~~~ 86 (89)
.+..+.+|...+.+
T Consensus 318 ~~~~l~~h~~~v~~ 331 (354)
T 2pbi_B 318 RVSILFGHENRVST 331 (354)
T ss_dssp EEEEECCCSSCEEE
T ss_pred eEEEEECCCCcEEE
Confidence 88899999987653
No 48
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.63 E-value=1.1e-15 Score=101.81 Aligned_cols=76 Identities=11% Similarity=0.134 Sum_probs=63.4
Q ss_pred CcCCcEEEEEEcc--------CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQ--------VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTV 65 (89)
Q Consensus 2 ~~~~~i~~~~~sp--------dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~i 65 (89)
+|.+.|.+++|+| ||++||+++.|++|+|||++++..+..+.+|..++.+ .+|++|+.|++|++
T Consensus 134 gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~ 213 (393)
T 4gq1_A 134 GHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRI 213 (393)
T ss_dssp SCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred CCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEE
Confidence 5788999999998 8999999999999999999888777777777777766 58999999999999
Q ss_pred EeCCCCEEEeee
Q psy12376 66 YNHMTSKRVPVL 77 (89)
Q Consensus 66 wd~~~~~~~~~l 77 (89)
||+++++.....
T Consensus 214 wd~~t~~~~~~~ 225 (393)
T 4gq1_A 214 FDWTLNLSAEEN 225 (393)
T ss_dssp EETTCCC-----
T ss_pred EECCCCcccccc
Confidence 999887665444
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.63 E-value=7.1e-15 Score=94.81 Aligned_cols=83 Identities=18% Similarity=0.189 Sum_probs=73.6
Q ss_pred cCCcEEEEEEccC----CCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 3 LRYYIFLLQTSQV----GQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 3 ~~~~i~~~~~spd----g~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
+...|++++|+|+ |++|++|+.||.|++||..+++.+..+.+|...|.+ ++|++|+.|+.|++||+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 4467999999999 679999999999999999999999999999998877 6899999999999999999
Q ss_pred CEEEeee---CCCCCCCc
Q psy12376 71 SKRVPVL---GKHTKSKP 85 (89)
Q Consensus 71 ~~~~~~l---~~h~~~~~ 85 (89)
++....+ .+|...+.
T Consensus 148 ~~~~~~~~~~~~~~~~v~ 165 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVL 165 (366)
T ss_dssp TEEEEEECSTTSCSSCEE
T ss_pred CeEEEEecccccccCcee
Confidence 9888877 57776654
No 50
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.62 E-value=3.5e-15 Score=96.16 Aligned_cols=83 Identities=11% Similarity=0.181 Sum_probs=70.3
Q ss_pred CcCCcEEEEEEccC---CCEEEEEeCCCcEEEEeCCC-CeEe-eEecCCcceeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQV---GQVLAIGTARGNLTVYNHMT-SKRV-PVLGKHTNTIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spd---g~~la~g~~~g~v~iwd~~~-~~~~-~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
+|.+.|++++|+|+ |++|++|+.||.|++||..+ ++.+ ..+.+|...|.+ ++|++++.|+.|++||++
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS 116 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence 47788999999999 69999999999999999986 5554 677889998887 799999999999999999
Q ss_pred CCEEEeeeCCCCCCCc
Q psy12376 70 TSKRVPVLGKHTKSKP 85 (89)
Q Consensus 70 ~~~~~~~l~~h~~~~~ 85 (89)
+++... +..|...+.
T Consensus 117 ~~~~~~-~~~~~~~v~ 131 (368)
T 3mmy_A 117 SNQAIQ-IAQHDAPVK 131 (368)
T ss_dssp TTEEEE-EEECSSCEE
T ss_pred CCCcee-eccccCceE
Confidence 888766 445666543
No 51
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.62 E-value=3.5e-15 Score=94.99 Aligned_cols=76 Identities=18% Similarity=0.305 Sum_probs=65.5
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec--CCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG--KHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~--~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+.+|+||+++ .||+|. |++|+|||+.+|+.+..+. +|...|.+ ++|++|+.|++|+|||+++++.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 4679999986 788775 8999999999999877664 57777776 89999999999999999999999999
Q ss_pred CCCCCCC
Q psy12376 78 GKHTKSK 84 (89)
Q Consensus 78 ~~h~~~~ 84 (89)
.+|...+
T Consensus 106 ~~h~~~~ 112 (318)
T 4ggc_A 106 TSHSARV 112 (318)
T ss_dssp ECCSSCE
T ss_pred cCccceE
Confidence 8988764
No 52
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.62 E-value=1.4e-14 Score=95.99 Aligned_cols=82 Identities=15% Similarity=0.121 Sum_probs=73.7
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEeeEe--cCCcceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKRVPVL--GKHTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~~~~~--~~h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
+|...|++++|+|++ .+|++++.||.|++||+++++.+..+ .+|...|.+ ++|++++.|+.|++||++++
T Consensus 129 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 129 GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 467789999999998 69999999999999999999998888 789888877 78999999999999999999
Q ss_pred EEEeee-CCCCCC
Q psy12376 72 KRVPVL-GKHTKS 83 (89)
Q Consensus 72 ~~~~~l-~~h~~~ 83 (89)
+....+ ..|...
T Consensus 209 ~~~~~~~~~~~~~ 221 (402)
T 2aq5_A 209 TVVAEKDRPHEGT 221 (402)
T ss_dssp EEEEEEECSSCSS
T ss_pred ceeeeeccCCCCC
Confidence 988887 677754
No 53
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.62 E-value=8.5e-15 Score=103.15 Aligned_cols=83 Identities=12% Similarity=0.181 Sum_probs=71.1
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|...|.+++|+|+|++|++|+.||.|++||..+++.+..+.+|...|.+ ++|++|+.|++|+|||+......
T Consensus 428 ~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 428 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce
Confidence 47788999999999999999999999999999999999999999998887 78999999999999999765444
Q ss_pred eee---CCCCCCC
Q psy12376 75 PVL---GKHTKSK 84 (89)
Q Consensus 75 ~~l---~~h~~~~ 84 (89)
... .+|...+
T Consensus 508 ~~~~~~~~h~~~v 520 (694)
T 3dm0_A 508 TISEGGEGHRDWV 520 (694)
T ss_dssp EECSSTTSCSSCE
T ss_pred eeccCCCCCCCcE
Confidence 332 3565544
No 54
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.62 E-value=7.4e-15 Score=103.44 Aligned_cols=85 Identities=13% Similarity=0.139 Sum_probs=74.4
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCC-----CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMT-----SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~-----~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~ 68 (89)
+|.+.|++++|+|++ ++|++|+.||.|++||... +.....+.+|...|.+ ++|++|+.|++|+|||+
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 459 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 588999999999975 7999999999999999865 3345678899998887 79999999999999999
Q ss_pred CCCEEEeeeCCCCCCCcC
Q psy12376 69 MTSKRVPVLGKHTKSKPS 86 (89)
Q Consensus 69 ~~~~~~~~l~~h~~~~~~ 86 (89)
.++.....+.+|...+.+
T Consensus 460 ~~~~~~~~~~~h~~~v~~ 477 (694)
T 3dm0_A 460 AAGVSTRRFVGHTKDVLS 477 (694)
T ss_dssp TTTEEEEEEECCSSCEEE
T ss_pred CCCcceeEEeCCCCCEEE
Confidence 999999999999987653
No 55
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.61 E-value=5.5e-15 Score=96.37 Aligned_cols=85 Identities=13% Similarity=0.110 Sum_probs=69.1
Q ss_pred CcCCcEEEEEEcc--CCCEEEEEeCCCcEEEEeCCCCeEeeEecC-Ccceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQ--VGQVLAIGTARGNLTVYNHMTSKRVPVLGK-HTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~sp--dg~~la~g~~~g~v~iwd~~~~~~~~~~~~-h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
+|.++|.+++|+| ++++|++++.||.|++||+++++.+..... |...+.+ .+|++|+.|+.|+|||++++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 3557899999999 999999999999999999999888666643 4445655 79999999999999999988
Q ss_pred EEE-eeeCC-CCCCCcC
Q psy12376 72 KRV-PVLGK-HTKSKPS 86 (89)
Q Consensus 72 ~~~-~~l~~-h~~~~~~ 86 (89)
+.. ..+.. |...+.+
T Consensus 203 ~~~~~~~~~~h~~~v~~ 219 (343)
T 3lrv_A 203 DQASSRFPVDEEAKIKE 219 (343)
T ss_dssp TSCCEECCCCTTSCEEE
T ss_pred CCCccEEeccCCCCEEE
Confidence 766 56666 8876543
No 56
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.61 E-value=1.4e-14 Score=96.20 Aligned_cols=83 Identities=17% Similarity=0.310 Sum_probs=74.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCC-CCEEEee
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHM-TSKRVPV 76 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~-~~~~~~~ 76 (89)
+...|++++|+|+|++|++|+.||.|++||..+++.+..+.+|...|.+ ++|++++.|+.|++||++ .+.....
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 212 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGT 212 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeE
Confidence 5678999999999999999999999999999999999999999998887 899999999999999998 5667777
Q ss_pred eCCCCCCCc
Q psy12376 77 LGKHTKSKP 85 (89)
Q Consensus 77 l~~h~~~~~ 85 (89)
+.+|...+.
T Consensus 213 ~~~~~~~v~ 221 (401)
T 4aez_A 213 LQGHSSEVC 221 (401)
T ss_dssp EECCSSCEE
T ss_pred EcCCCCCee
Confidence 888887654
No 57
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.60 E-value=1.3e-14 Score=106.68 Aligned_cols=84 Identities=17% Similarity=0.149 Sum_probs=77.4
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~~~ 72 (89)
+|.+.|++++|+|+|++||+++.||.|++||..+++.+..+.+|...|.+ .++++|+.|+.|++||++++.
T Consensus 655 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~ 734 (1249)
T 3sfz_A 655 AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE 734 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS
T ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc
Confidence 46788999999999999999999999999999999999999999998876 489999999999999999999
Q ss_pred EEeeeCCCCCCCc
Q psy12376 73 RVPVLGKHTKSKP 85 (89)
Q Consensus 73 ~~~~l~~h~~~~~ 85 (89)
....+.+|...+.
T Consensus 735 ~~~~~~~h~~~v~ 747 (1249)
T 3sfz_A 735 CRNTMFGHTNSVN 747 (1249)
T ss_dssp EEEEECCCSSCEE
T ss_pred hhheecCCCCCEE
Confidence 9999999988764
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.59 E-value=4.7e-16 Score=101.60 Aligned_cols=82 Identities=12% Similarity=0.139 Sum_probs=66.4
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCC--eEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCE--
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTS--KRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSK-- 72 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~--~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~-- 72 (89)
.++|++++|+|+|++||+|+.||.|++||..++ +.+..+.+|...|.+ ++|++++.|++|++||+.++.
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW 90 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce
Confidence 467999999999999999999999999999988 677888899998887 799999999999999998776
Q ss_pred -EEeeeCCCCCCCc
Q psy12376 73 -RVPVLGKHTKSKP 85 (89)
Q Consensus 73 -~~~~l~~h~~~~~ 85 (89)
....+.+|...+.
T Consensus 91 ~~~~~~~~~~~~v~ 104 (377)
T 3dwl_C 91 KQTLVLLRLNRAAT 104 (377)
T ss_dssp CCEEECCCCSSCEE
T ss_pred eeeeEecccCCceE
Confidence 4556677876654
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.59 E-value=4.6e-14 Score=90.13 Aligned_cols=84 Identities=18% Similarity=0.209 Sum_probs=72.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe--EeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK--RVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~--~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
.+...+.+++|+|++++|++++.||.|++||..+++ ....+..|...+.+ ++|++++.|+.|++||+++++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 456789999999999999999999999999998876 55667788887766 799999999999999999999
Q ss_pred EEeeeCCCCCCCc
Q psy12376 73 RVPVLGKHTKSKP 85 (89)
Q Consensus 73 ~~~~l~~h~~~~~ 85 (89)
....+..|...+.
T Consensus 175 ~~~~~~~~~~~i~ 187 (337)
T 1gxr_A 175 LVRQFQGHTDGAS 187 (337)
T ss_dssp EEEEECCCSSCEE
T ss_pred eeeeeecccCceE
Confidence 8888888887654
No 60
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.59 E-value=1.4e-14 Score=92.22 Aligned_cols=73 Identities=12% Similarity=0.230 Sum_probs=63.4
Q ss_pred CcCCcEEEEEEccCC----CEEEEEeCCCcEEEEeCCCC-----------------------------------------
Q psy12376 2 NLRYYIFLLQTSQVG----QVLAIGTARGNLTVYNHMTS----------------------------------------- 36 (89)
Q Consensus 2 ~~~~~i~~~~~spdg----~~la~g~~~g~v~iwd~~~~----------------------------------------- 36 (89)
+|...|++++|+|++ ++|++++.||.|++||.+.+
T Consensus 212 ~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
T 3f3f_A 212 GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQ 291 (351)
T ss_dssp CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------C
T ss_pred CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeec
Confidence 467789999999998 89999999999999999764
Q ss_pred -----eEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 37 -----KRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 37 -----~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+.+..+.+|...|.+ ++|++|+.|+.|+|||+.+++..
T Consensus 292 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 292 SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp CSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred ccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 556677889888877 79999999999999999876433
No 61
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.59 E-value=1e-14 Score=94.60 Aligned_cols=83 Identities=16% Similarity=0.162 Sum_probs=71.0
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe--EeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK--RVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~--~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
|.++|++++|+|+|++||+++.||.|++||..+++ .+..+.+|...|.+ ++|++++.|+.|++||+++++.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 86 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee
Confidence 56789999999999999999999999999999887 77888899988877 7999999999999999988765
Q ss_pred Eee--eCCCCCCCc
Q psy12376 74 VPV--LGKHTKSKP 85 (89)
Q Consensus 74 ~~~--l~~h~~~~~ 85 (89)
... +..|...+.
T Consensus 87 ~~~~~~~~~~~~v~ 100 (372)
T 1k8k_C 87 KPTLVILRINRAAR 100 (372)
T ss_dssp EEEEECCCCSSCEE
T ss_pred eeeEEeecCCCcee
Confidence 443 356665543
No 62
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.59 E-value=1.9e-14 Score=98.47 Aligned_cols=84 Identities=19% Similarity=0.244 Sum_probs=74.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC-Ccceeec-----------------cEEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK-HTNTIVG-----------------QVLAIGTARGNL 63 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~-h~~~i~~-----------------~~las~s~d~~v 63 (89)
.|...|++++|+|+|++|++++.||.|++||..+++.+..+.+ |...|.+ ++||+|+.|+.|
T Consensus 486 ~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i 565 (615)
T 1pgu_A 486 PLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 565 (615)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCE
T ss_pred CccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcE
Confidence 3567899999999999999999999999999999999888877 8877654 489999999999
Q ss_pred EEEeCCCC-EEEeeeCCCCCCCc
Q psy12376 64 TVYNHMTS-KRVPVLGKHTKSKP 85 (89)
Q Consensus 64 ~iwd~~~~-~~~~~l~~h~~~~~ 85 (89)
++||+.++ +....+.+|...+.
T Consensus 566 ~iw~~~~~~~~~~~~~~h~~~v~ 588 (615)
T 1pgu_A 566 FIYSVKRPMKIIKALNAHKDGVN 588 (615)
T ss_dssp EEEESSCTTCCEEETTSSTTCEE
T ss_pred EEEECCCCceechhhhcCccceE
Confidence 99999887 77788888987654
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.58 E-value=1.7e-14 Score=94.46 Aligned_cols=75 Identities=24% Similarity=0.363 Sum_probs=69.8
Q ss_pred CCcEEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeEeeEecC-------------Ccceeec-------cEEEEEeCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTAR---GNLTVYNHMTSKRVPVLGK-------------HTNTIVG-------QVLAIGTAR 60 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~---g~v~iwd~~~~~~~~~~~~-------------h~~~i~~-------~~las~s~d 60 (89)
...+.+++|+|++++|++++.| |.|++||.++++.+..+.+ |...|.+ ++|++++.|
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 312 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence 6789999999999999999999 9999999999999888888 8888876 799999999
Q ss_pred CCEEEEeCCCCEEEeeeC
Q psy12376 61 GNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 61 ~~v~iwd~~~~~~~~~l~ 78 (89)
+.|+|||+++++.+..+.
T Consensus 313 g~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTLN 330 (397)
T ss_dssp SEEEEEETTTTEEEEEEE
T ss_pred CeEEEEEcCCCceeEEEe
Confidence 999999999999888887
No 64
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.58 E-value=4.4e-15 Score=97.02 Aligned_cols=84 Identities=11% Similarity=0.070 Sum_probs=62.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe---EeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK---RVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~---~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
+|...|++++|+|+|++|++++.||.|++||..+++ ....+.+|...|.+ ++|++++.|+.|++||++++
T Consensus 53 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 53 DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQE 132 (377)
T ss_dssp CCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC---
T ss_pred cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCc
Confidence 467789999999999999999999999999998876 56667789888877 78999999999999999877
Q ss_pred EE---EeeeCC-CCCCCc
Q psy12376 72 KR---VPVLGK-HTKSKP 85 (89)
Q Consensus 72 ~~---~~~l~~-h~~~~~ 85 (89)
+. ...+.+ |...+.
T Consensus 133 ~~~~~~~~~~~~h~~~v~ 150 (377)
T 3dwl_C 133 NDWWVSKHLKRPLRSTIL 150 (377)
T ss_dssp --CCCCEEECSSCCSCEE
T ss_pred ccceeeeEeecccCCCeE
Confidence 63 455555 876654
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.58 E-value=8.5e-14 Score=91.13 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=69.2
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
|.+.|++++|+|+|++|++++.||.|++|| .+++.+..+.+|...|.+ ++|++++.|+.|++||+.+++...
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 456899999999999999999999999999 567788889999988877 789999999999999999999888
Q ss_pred eeCCCCCC
Q psy12376 76 VLGKHTKS 83 (89)
Q Consensus 76 ~l~~h~~~ 83 (89)
.+..|...
T Consensus 186 ~~~~~~~~ 193 (425)
T 1r5m_A 186 HFELKETG 193 (425)
T ss_dssp EECCC---
T ss_pred EeeccccC
Confidence 87766554
No 66
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.5e-14 Score=105.51 Aligned_cols=85 Identities=8% Similarity=0.117 Sum_probs=70.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe--------------------------------------------
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK-------------------------------------------- 37 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~-------------------------------------------- 37 (89)
+|...|++++|||||++||+|+.||+|+|||..+++
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 466789999999999999999999999999987652
Q ss_pred -EeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEe-----eeC-CCCCCCcC
Q psy12376 38 -RVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVP-----VLG-KHTKSKPS 86 (89)
Q Consensus 38 -~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~-----~l~-~h~~~~~~ 86 (89)
.+..+.+|.+.|.+ .+||+|+.|++|+|||++++..+. .+. +|+..+.+
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~s 627 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTC 627 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTSEEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEE
T ss_pred ceeEEEEcCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEE
Confidence 35677889998887 699999999999999998877653 233 78776654
No 67
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.57 E-value=4.8e-14 Score=94.42 Aligned_cols=81 Identities=17% Similarity=0.268 Sum_probs=72.6
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+...|++++| ++++|++|+.||.|++||..+++.+..+.+|...|.+ ++|++|+.|++|++||+.+++....+
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 209 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTL 209 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEE
T ss_pred CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 3455788776 8899999999999999999999999999999999887 89999999999999999999999999
Q ss_pred CCCCCCCc
Q psy12376 78 GKHTKSKP 85 (89)
Q Consensus 78 ~~h~~~~~ 85 (89)
.+|...+.
T Consensus 210 ~~h~~~v~ 217 (435)
T 1p22_A 210 IHHCEAVL 217 (435)
T ss_dssp CCCCSCEE
T ss_pred cCCCCcEE
Confidence 88887654
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.57 E-value=5.8e-14 Score=94.09 Aligned_cols=76 Identities=11% Similarity=0.066 Sum_probs=68.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
+|...|++++|+|++++|++|+.||.|++||.++++.+..+.+|...|.+ ++|++++.|+.|++||++++.....
T Consensus 308 ~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 308 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeee
Confidence 46778999999999999999999999999999999999999999998887 8999999999999999987765544
Q ss_pred e
Q psy12376 77 L 77 (89)
Q Consensus 77 l 77 (89)
.
T Consensus 388 ~ 388 (464)
T 3v7d_B 388 Y 388 (464)
T ss_dssp E
T ss_pred e
Confidence 3
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.57 E-value=2e-14 Score=101.57 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=75.7
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC-EE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS-KR 73 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~-~~ 73 (89)
.|..+|++++|+|+|++||+|+.||.|++||..+++.+..+.+|...|.+ ++|++++.|+.|++||+.++ ..
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~ 132 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL 132 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEE
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceE
Confidence 36778999999999999999999999999999999999999999998887 68999999999999999876 77
Q ss_pred EeeeCCCCCCCcC
Q psy12376 74 VPVLGKHTKSKPS 86 (89)
Q Consensus 74 ~~~l~~h~~~~~~ 86 (89)
...+.+|...+.+
T Consensus 133 ~~~~~~~~~~v~~ 145 (814)
T 3mkq_A 133 EQTFEGHEHFVMC 145 (814)
T ss_dssp EEEEECCSSCEEE
T ss_pred EEEEcCCCCcEEE
Confidence 7778888876543
No 70
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.57 E-value=2.9e-14 Score=90.39 Aligned_cols=81 Identities=9% Similarity=0.044 Sum_probs=73.3
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
+...+.+++|+|++. +++++.||.|++||.++++.+..+.+|...|.+ .+|++++.|+.|++||+++++....
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQV 261 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEE
T ss_pred CcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEE
Confidence 567899999999998 999999999999999999999999999998887 5799999999999999999998888
Q ss_pred eCCCCCCC
Q psy12376 77 LGKHTKSK 84 (89)
Q Consensus 77 l~~h~~~~ 84 (89)
+..|...+
T Consensus 262 ~~~~~~~i 269 (313)
T 3odt_A 262 ITLPAISI 269 (313)
T ss_dssp EECSSSCE
T ss_pred EeccCceE
Confidence 88887654
No 71
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.57 E-value=9.5e-15 Score=94.22 Aligned_cols=74 Identities=12% Similarity=0.119 Sum_probs=65.8
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeEe---cCCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPVL---GKHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~~---~~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
+|...|++++|+| ++++|++++.||.|++||+++++.+..+ .+|...|.+ ++|++++.|+.|++||+++
T Consensus 113 ~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 3677899999999 9999999999999999999999988887 678888877 7999999999999999987
Q ss_pred CEEEe
Q psy12376 71 SKRVP 75 (89)
Q Consensus 71 ~~~~~ 75 (89)
++...
T Consensus 193 ~~~~~ 197 (366)
T 3k26_A 193 KRMMN 197 (366)
T ss_dssp HHHHH
T ss_pred Ccccc
Confidence 65443
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.56 E-value=2.5e-14 Score=94.92 Aligned_cols=72 Identities=13% Similarity=0.245 Sum_probs=60.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe-----------EeeEecCCc------------ceeec-------
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK-----------RVPVLGKHT------------NTIVG------- 51 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~-----------~~~~~~~h~------------~~i~~------- 51 (89)
.+.+.|++++|+|+|++||+|+.||.|++||..+++ ....+.+|. ..|.+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 346789999999999999999999999999998776 467788897 66665
Q ss_pred --cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 52 --QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 52 --~~las~s~d~~v~iwd~~~~~~ 73 (89)
.+|++++.|++|++||+.++..
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~ 129 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDK 129 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccC
Confidence 3799999999999999976443
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.56 E-value=4.2e-14 Score=91.66 Aligned_cols=83 Identities=12% Similarity=0.077 Sum_probs=72.7
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCC------------------CCeEeeEecCCcceeec-------cEEEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHM------------------TSKRVPVLGKHTNTIVG-------QVLAIG 57 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~------------------~~~~~~~~~~h~~~i~~-------~~las~ 57 (89)
|...|++++|+|++++|++++.||.|++||++ .++.+..+.+|...|.+ ++|+++
T Consensus 141 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 220 (372)
T 1k8k_C 141 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 220 (372)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEE
T ss_pred cCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEE
Confidence 56789999999999999999999999999953 67788888889888876 699999
Q ss_pred eCCCCEEEEeCCCCEEEeeeCCCCCCCc
Q psy12376 58 TARGNLTVYNHMTSKRVPVLGKHTKSKP 85 (89)
Q Consensus 58 s~d~~v~iwd~~~~~~~~~l~~h~~~~~ 85 (89)
+.|+.|++||+++++.+..+..|...+.
T Consensus 221 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~ 248 (372)
T 1k8k_C 221 SHDSTVCLADADKKMAVATLASETLPLL 248 (372)
T ss_dssp ETTTEEEEEEGGGTTEEEEEECSSCCEE
T ss_pred eCCCEEEEEECCCCceeEEEccCCCCeE
Confidence 9999999999998888888888876543
No 74
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.1e-14 Score=104.00 Aligned_cols=85 Identities=18% Similarity=0.232 Sum_probs=73.3
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCC--CCeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHM--TSKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~--~~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~ 70 (89)
+|.++|++++|+|+|++|++|+.||.|++||.. +++.+..+.+|..+|.+ ++|++|+.||.|++||+.+
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 86 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC
Confidence 578899999999999999999999999999987 45667788899998876 5899999999999999988
Q ss_pred CE--EEeeeCCCCCCCcC
Q psy12376 71 SK--RVPVLGKHTKSKPS 86 (89)
Q Consensus 71 ~~--~~~~l~~h~~~~~~ 86 (89)
+. ....+.+|...+.+
T Consensus 87 ~~~~~~~~~~~h~~~V~~ 104 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNS 104 (753)
T ss_dssp TEEEEEEEECCCSSCEEE
T ss_pred CcccccccccCCCCCeEE
Confidence 86 66677788876543
No 75
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.56 E-value=3.4e-14 Score=91.28 Aligned_cols=84 Identities=12% Similarity=0.160 Sum_probs=68.2
Q ss_pred cCCcEEEEEEccC--CCEEEEEeCCCcEEEEeCCCCeE--eeEecCCcceeec--------------------cEEEEEe
Q psy12376 3 LRYYIFLLQTSQV--GQVLAIGTARGNLTVYNHMTSKR--VPVLGKHTNTIVG--------------------QVLAIGT 58 (89)
Q Consensus 3 ~~~~i~~~~~spd--g~~la~g~~~g~v~iwd~~~~~~--~~~~~~h~~~i~~--------------------~~las~s 58 (89)
|...|.+++|+|+ |.+||+++.||.|++||.+++.. ...+.+|...|.+ ++|++|+
T Consensus 98 h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs 177 (297)
T 2pm7_B 98 HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG 177 (297)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEE
T ss_pred CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEc
Confidence 6678999999998 89999999999999999987532 3456678777664 2799999
Q ss_pred CCCCEEEEeCCCCE----EEeeeCCCCCCCcC
Q psy12376 59 ARGNLTVYNHMTSK----RVPVLGKHTKSKPS 86 (89)
Q Consensus 59 ~d~~v~iwd~~~~~----~~~~l~~h~~~~~~ 86 (89)
.|++|+|||++++. ....+.+|...+.+
T Consensus 178 ~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~ 209 (297)
T 2pm7_B 178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD 209 (297)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred CCCcEEEEEEcCCCceEEEEEEecCCCCceEE
Confidence 99999999997654 55678899877543
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.56 E-value=6.7e-14 Score=93.77 Aligned_cols=83 Identities=17% Similarity=0.200 Sum_probs=72.5
Q ss_pred CcCCc-EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 2 NLRYY-IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 2 ~~~~~-i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
+|.+. ++++.+ ++++|++|+.||.|++||..+++.+..+.+|...|.+ .+|++|+.|++|++||+++++..
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~ 196 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCT 196 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEE
Confidence 35555 566666 5679999999999999999999999999999999987 69999999999999999999999
Q ss_pred eeeCCCCCCCcC
Q psy12376 75 PVLGKHTKSKPS 86 (89)
Q Consensus 75 ~~l~~h~~~~~~ 86 (89)
..+.+|...+.+
T Consensus 197 ~~~~~h~~~v~~ 208 (464)
T 3v7d_B 197 HVFEGHNSTVRC 208 (464)
T ss_dssp EEECCCSSCEEE
T ss_pred EEECCCCCccEE
Confidence 999999877643
No 77
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.56 E-value=6e-14 Score=93.95 Aligned_cols=83 Identities=22% Similarity=0.266 Sum_probs=72.2
Q ss_pred CcCCc-EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 2 NLRYY-IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 2 ~~~~~-i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+|.+. +++ ++++|++|++|+.||.|++||..+++.+..+.+|...|.+ +++++|+.|++|++||+.+++...
T Consensus 116 ~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 193 (445)
T 2ovr_B 116 GHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIH 193 (445)
T ss_dssp CSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEE
Confidence 35554 455 5557899999999999999999999999999999999887 899999999999999999999999
Q ss_pred eeCCCCCCCcC
Q psy12376 76 VLGKHTKSKPS 86 (89)
Q Consensus 76 ~l~~h~~~~~~ 86 (89)
.+.+|...+.+
T Consensus 194 ~~~~h~~~v~~ 204 (445)
T 2ovr_B 194 TLYGHTSTVRC 204 (445)
T ss_dssp EECCCSSCEEE
T ss_pred EECCCCCcEEE
Confidence 99999877643
No 78
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.55 E-value=1e-13 Score=88.16 Aligned_cols=82 Identities=20% Similarity=0.327 Sum_probs=72.1
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCC-EEEee
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTS-KRVPV 76 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~-~~~~~ 76 (89)
|...|++++|+|+|++||+|+.||.|++||.++++.+..+.+|...+.+ .++++++.++.+.+|+...+ .....
T Consensus 66 ~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~ 145 (318)
T 4ggc_A 66 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVAT 145 (318)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEE
Confidence 5567999999999999999999999999999999999999999988777 89999999999999999754 55566
Q ss_pred eCCCCCCC
Q psy12376 77 LGKHTKSK 84 (89)
Q Consensus 77 l~~h~~~~ 84 (89)
+.+|...+
T Consensus 146 ~~~~~~~~ 153 (318)
T 4ggc_A 146 LSGHSQEV 153 (318)
T ss_dssp EECCSSCE
T ss_pred EcCccCce
Confidence 77777654
No 79
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.55 E-value=4e-14 Score=91.72 Aligned_cols=83 Identities=12% Similarity=0.185 Sum_probs=67.4
Q ss_pred CcCCcEEEEEEcc--CCCEEEEEeCCCcEEEEeCCCCe--EeeEecCCcceeec---------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQ--VGQVLAIGTARGNLTVYNHMTSK--RVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~sp--dg~~la~g~~~g~v~iwd~~~~~--~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~ 68 (89)
+|.++|++++|+| ++++||+|+.|++|++||.++++ ....+.+|...|.+ .+|++|+.|++|++||+
T Consensus 55 gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~ 134 (316)
T 3bg1_A 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTY 134 (316)
T ss_dssp CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEE
T ss_pred CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEec
Confidence 4788999999986 48999999999999999998863 55677889888776 48999999999999999
Q ss_pred CCCE---EEeeeCCCCCCC
Q psy12376 69 MTSK---RVPVLGKHTKSK 84 (89)
Q Consensus 69 ~~~~---~~~~l~~h~~~~ 84 (89)
+.+. ....+.+|...+
T Consensus 135 ~~~~~~~~~~~~~~h~~~v 153 (316)
T 3bg1_A 135 TGEGQWEVKKINNAHTIGC 153 (316)
T ss_dssp CSSSCEEECCBTTSSSSCB
T ss_pred CCCCCcceeeeeccccCCc
Confidence 7652 234556776554
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.55 E-value=5.2e-14 Score=92.91 Aligned_cols=81 Identities=14% Similarity=0.172 Sum_probs=72.0
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
.+....|+|++++||+|+.||.|++||..+++....+.+|...|.+ ++|++|+.|+.|++||+++++....+.
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 178 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI 178 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc
Confidence 3556689999999999999999999999999888888899998887 799999999999999999888888888
Q ss_pred CCCCCCcC
Q psy12376 79 KHTKSKPS 86 (89)
Q Consensus 79 ~h~~~~~~ 86 (89)
+|...+.+
T Consensus 179 ~h~~~v~~ 186 (420)
T 3vl1_A 179 GHRATVTD 186 (420)
T ss_dssp CCSSCEEE
T ss_pred CCCCcEEE
Confidence 89877643
No 81
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.7e-14 Score=94.10 Aligned_cols=75 Identities=11% Similarity=0.059 Sum_probs=63.5
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEe-eEecC-Ccceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRV-PVLGK-HTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~-~~~~~-h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
...+++++|+|+|.+||+|+.||.|++||+++++.+ ..+.. |..+|.+ .+|+++++| .|++||++.++..
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGT 248 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTC
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcc
Confidence 446899999999999999999999999999998877 67777 9998887 789999955 9999999877655
Q ss_pred eeeCC
Q psy12376 75 PVLGK 79 (89)
Q Consensus 75 ~~l~~ 79 (89)
..+..
T Consensus 249 ~~~~~ 253 (343)
T 3lrv_A 249 LAYPT 253 (343)
T ss_dssp BSSCC
T ss_pred eeecc
Confidence 44443
No 82
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.55 E-value=1e-13 Score=92.82 Aligned_cols=83 Identities=14% Similarity=0.218 Sum_probs=75.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
+|...|.+++| ++++|++|+.||.|++||.++++.+..+.+|...|.+ +++++|+.|+.|++||+++++....
T Consensus 254 ~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~ 331 (435)
T 1p22_A 254 GHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV 331 (435)
T ss_dssp CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEE
Confidence 46678999999 7899999999999999999999999999999998887 8999999999999999999999999
Q ss_pred eCCCCCCCcC
Q psy12376 77 LGKHTKSKPS 86 (89)
Q Consensus 77 l~~h~~~~~~ 86 (89)
+.+|...+.+
T Consensus 332 ~~~h~~~v~~ 341 (435)
T 1p22_A 332 LEGHEELVRC 341 (435)
T ss_dssp ECCCSSCEEE
T ss_pred EeCCcCcEEE
Confidence 9999877543
No 83
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.55 E-value=3.7e-14 Score=91.37 Aligned_cols=79 Identities=10% Similarity=0.132 Sum_probs=66.8
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec---------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~~~~~ 72 (89)
.|...|++++|+|++++|++++.||.|++||..+++.+. +..|...|.+ ++|++++.|+.|++||+++++
T Consensus 84 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 84 MHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred cccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 367789999999999999999999999999999988665 4457777665 679999999999999999887
Q ss_pred EEeeeCCCC
Q psy12376 73 RVPVLGKHT 81 (89)
Q Consensus 73 ~~~~l~~h~ 81 (89)
....+..|.
T Consensus 163 ~~~~~~~~~ 171 (368)
T 3mmy_A 163 PMMVLQLPE 171 (368)
T ss_dssp CSEEEECSS
T ss_pred EEEEEecCC
Confidence 766665544
No 84
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.54 E-value=3.8e-14 Score=91.08 Aligned_cols=83 Identities=16% Similarity=0.151 Sum_probs=69.0
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe---EeeEecCCcceeec-------c-EEEEEeCCCCEEEEeC-C
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK---RVPVLGKHTNTIVG-------Q-VLAIGTARGNLTVYNH-M 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~---~~~~~~~h~~~i~~-------~-~las~s~d~~v~iwd~-~ 69 (89)
.|.+.|++++|+|++++|++++.||.|++||..+++ ....+.+|...|.+ + +|++|+.|+.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 477889999999999999999999999999998766 24445578888876 6 8999999999999999 8
Q ss_pred CCEEEeeeCC--CCCCCc
Q psy12376 70 TSKRVPVLGK--HTKSKP 85 (89)
Q Consensus 70 ~~~~~~~l~~--h~~~~~ 85 (89)
+++. ..+.+ |...+.
T Consensus 89 ~~~~-~~~~~~~~~~~v~ 105 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGIC 105 (342)
T ss_dssp SSSE-EECBSCCCCSCEE
T ss_pred CCce-EeccccCCCCceE
Confidence 7765 55666 777654
No 85
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.54 E-value=6.6e-14 Score=88.72 Aligned_cols=83 Identities=8% Similarity=-0.021 Sum_probs=71.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC---
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS--- 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~--- 71 (89)
+|.+.|++++| |++++|++++.||.|++||..+++....+..|...|.+ ++|++++.|+.|++|++...
T Consensus 16 ~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 94 (313)
T 3odt_A 16 GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGE 94 (313)
T ss_dssp CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTS
T ss_pred CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCC
Confidence 57889999999 99999999999999999999999888888888888877 79999999999999999643
Q ss_pred EEEeeeCCCCCCCc
Q psy12376 72 KRVPVLGKHTKSKP 85 (89)
Q Consensus 72 ~~~~~l~~h~~~~~ 85 (89)
+....+.+|...+.
T Consensus 95 ~~~~~~~~~~~~i~ 108 (313)
T 3odt_A 95 DPLYTLIGHQGNVC 108 (313)
T ss_dssp CC-CEECCCSSCEE
T ss_pred CcccchhhcccCEE
Confidence 45566777776654
No 86
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.54 E-value=8.1e-14 Score=89.54 Aligned_cols=83 Identities=17% Similarity=0.155 Sum_probs=71.3
Q ss_pred cCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCC------eEeeEecCCcc---------eeec-------cEEEEEeC
Q psy12376 3 LRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTS------KRVPVLGKHTN---------TIVG-------QVLAIGTA 59 (89)
Q Consensus 3 ~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~------~~~~~~~~h~~---------~i~~-------~~las~s~ 59 (89)
+...+.+++|+| ++++|++++.+|.+.+|+.+.. +....+..|.. .|.+ ++|++++.
T Consensus 192 ~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 271 (342)
T 1yfq_A 192 LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271 (342)
T ss_dssp CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET
T ss_pred CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC
Confidence 456799999999 9999999999999999999776 66667777754 6666 78999999
Q ss_pred CCCEEEEeCCCCEEEeeeCCC-CCCCc
Q psy12376 60 RGNLTVYNHMTSKRVPVLGKH-TKSKP 85 (89)
Q Consensus 60 d~~v~iwd~~~~~~~~~l~~h-~~~~~ 85 (89)
|+.|++||+.+++.+..+.+| ...+.
T Consensus 272 dg~i~vwd~~~~~~~~~~~~~h~~~v~ 298 (342)
T 1yfq_A 272 DGIISCWNLQTRKKIKNFAKFNEDSVV 298 (342)
T ss_dssp TSCEEEEETTTTEEEEECCCCSSSEEE
T ss_pred CceEEEEcCccHhHhhhhhcccCCCce
Confidence 999999999999999989888 76654
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.54 E-value=3.6e-14 Score=94.75 Aligned_cols=77 Identities=17% Similarity=0.185 Sum_probs=62.5
Q ss_pred CCcEEEEEEccCCCEEEEEe--CCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGT--ARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~--~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
...+.++.|+|++..+++++ .||.|+|||..+++.+..+.+|.++|.+ ++||||+.|++|+|||+.+....
T Consensus 320 ~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 320 HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC
T ss_pred ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCcc
Confidence 34688999999999888765 6899999999999999999999999987 79999999999999999754433
Q ss_pred eeeCCC
Q psy12376 75 PVLGKH 80 (89)
Q Consensus 75 ~~l~~h 80 (89)
.....+
T Consensus 400 ~~~~~~ 405 (420)
T 4gga_A 400 RRRERE 405 (420)
T ss_dssp ------
T ss_pred chhhhc
Confidence 333333
No 88
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.53 E-value=3.5e-13 Score=86.01 Aligned_cols=75 Identities=15% Similarity=0.134 Sum_probs=68.2
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+...+++++|+|++++|++++.||.|++||.++++.+..+..|...+.+ ++|++++.|+.|++||+++++...
T Consensus 140 ~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 219 (337)
T 1gxr_A 140 SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQ 219 (337)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEe
Confidence 4567999999999999999999999999999999999999999888876 699999999999999999888776
Q ss_pred ee
Q psy12376 76 VL 77 (89)
Q Consensus 76 ~l 77 (89)
.+
T Consensus 220 ~~ 221 (337)
T 1gxr_A 220 QH 221 (337)
T ss_dssp EE
T ss_pred ee
Confidence 55
No 89
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.3e-13 Score=90.22 Aligned_cols=84 Identities=11% Similarity=0.122 Sum_probs=74.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
.|...|.+++|+|++++|++++.||.|++||.++++.+..+.+|...|.+ .++++++.|+.|++||+++++...
T Consensus 245 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 245 GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeE
Confidence 35678999999999999999999999999999998888888889888876 599999999999999999999888
Q ss_pred eeCCCCCCCc
Q psy12376 76 VLGKHTKSKP 85 (89)
Q Consensus 76 ~l~~h~~~~~ 85 (89)
.+..|...+.
T Consensus 325 ~~~~~~~~i~ 334 (425)
T 1r5m_A 325 LSIVDGVPIF 334 (425)
T ss_dssp EEECTTCCEE
T ss_pred ecccCCccEE
Confidence 8888776543
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.52 E-value=2.5e-13 Score=87.05 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=64.6
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+|.++|++++|+|+|++|++|+.||.|++||.++++.+..+..+. .+.+ .++++++.|+.|+|||++++....
T Consensus 213 ~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 213 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD 291 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-CEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-eEEeeecCCCCceeeccCCCEEEEEECCCCeEEE
Confidence 467789999999999999999999999999999999888887653 4443 678888899999999999887766
Q ss_pred eeC
Q psy12376 76 VLG 78 (89)
Q Consensus 76 ~l~ 78 (89)
.+.
T Consensus 292 ~~~ 294 (340)
T 4aow_A 292 ELK 294 (340)
T ss_dssp EEC
T ss_pred ecc
Confidence 554
No 91
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.52 E-value=1.1e-13 Score=90.82 Aligned_cols=80 Identities=15% Similarity=0.272 Sum_probs=68.0
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------c-EEEEEeCCCCEEEEeCCC----C
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------Q-VLAIGTARGNLTVYNHMT----S 71 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~-~las~s~d~~v~iwd~~~----~ 71 (89)
...+.+++|+|++++|++|+.||.|++||+ +++.+..+.+|...|.+ + +|++|+.|+.|++||+++ +
T Consensus 163 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 241 (383)
T 3ei3_B 163 DYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN 241 (383)
T ss_dssp SCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT
T ss_pred CCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc
Confidence 467999999999999999999999999999 46778888899998887 4 899999999999999986 5
Q ss_pred EEEeeeCCCCCCCc
Q psy12376 72 KRVPVLGKHTKSKP 85 (89)
Q Consensus 72 ~~~~~l~~h~~~~~ 85 (89)
.....+ +|...+.
T Consensus 242 ~~~~~~-~~~~~v~ 254 (383)
T 3ei3_B 242 SYIAEM-PHEKPVN 254 (383)
T ss_dssp CEEEEE-ECSSCEE
T ss_pred ceEEEe-cCCCceE
Confidence 566655 5665543
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.52 E-value=5e-14 Score=92.59 Aligned_cols=71 Identities=17% Similarity=0.281 Sum_probs=63.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC----CeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT----SKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~----~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~ 69 (89)
.|...|++++|+|++++||+++.||.|++||..+ .+.+..+.+|...|.+ ++|++++.|+.|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 4667899999999999999999999999999987 3577888899988776 689999999999999998
Q ss_pred CCE
Q psy12376 70 TSK 72 (89)
Q Consensus 70 ~~~ 72 (89)
+++
T Consensus 145 ~~~ 147 (416)
T 2pm9_A 145 KCT 147 (416)
T ss_dssp TTS
T ss_pred CCc
Confidence 765
No 93
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.52 E-value=1.7e-13 Score=93.01 Aligned_cols=77 Identities=16% Similarity=0.173 Sum_probs=65.0
Q ss_pred cCCcEEEEEEccC-CCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 3 LRYYIFLLQTSQV-GQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 3 ~~~~i~~~~~spd-g~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
|.+.|.+++|+|+ +.+||+++.||.|++||++++..+....+|...+.+ ++|++|+.|++|++||++ ++..
T Consensus 148 h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~ 226 (434)
T 2oit_A 148 AGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEK 226 (434)
T ss_dssp GGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEE
T ss_pred CCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccc
Confidence 6778999999998 889999999999999999988766666678888776 799999999999999998 5544
Q ss_pred eeeCCC
Q psy12376 75 PVLGKH 80 (89)
Q Consensus 75 ~~l~~h 80 (89)
..+..|
T Consensus 227 ~~~~~~ 232 (434)
T 2oit_A 227 KVIPCP 232 (434)
T ss_dssp EEECCC
T ss_pred ccccCC
Confidence 545444
No 94
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.52 E-value=1e-13 Score=91.71 Aligned_cols=84 Identities=7% Similarity=0.054 Sum_probs=70.1
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCC----cEEEEeCCCCeE----eeEecCCcceeec-------cEEEEEeCCCCEEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARG----NLTVYNHMTSKR----VPVLGKHTNTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g----~v~iwd~~~~~~----~~~~~~h~~~i~~-------~~las~s~d~~v~iwd 67 (89)
|...+.+++|+|||+++++++.++ .+.+|+...+.. ...+.+|...|.+ ++||+|+.|++|+|||
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd 297 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVK 297 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEE
Confidence 556799999999999999998887 688899876543 3456788888876 8999999999999999
Q ss_pred CCCCEEEee-eCCCCCCCcC
Q psy12376 68 HMTSKRVPV-LGKHTKSKPS 86 (89)
Q Consensus 68 ~~~~~~~~~-l~~h~~~~~~ 86 (89)
+++++.+.. +.+|...+.+
T Consensus 298 ~~~~~~~~~~~~gH~~~V~~ 317 (365)
T 4h5i_A 298 LKDLSMSKIFKQAHSFAITE 317 (365)
T ss_dssp TTTTEEEEEETTSSSSCEEE
T ss_pred CCCCcEEEEecCcccCCEEE
Confidence 999998876 5789987654
No 95
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.52 E-value=1.2e-13 Score=100.75 Aligned_cols=80 Identities=16% Similarity=0.160 Sum_probs=67.1
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+|++.|++++|+|+|++||+|+.||.|++|+..+++....+ .|...|.+ ++|++++.|++|+|||+++++.+.
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~ 93 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLT 93 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEE
Confidence 57788999999999999999999999999999887765544 46777766 679999999999999999888777
Q ss_pred eeCCCCCC
Q psy12376 76 VLGKHTKS 83 (89)
Q Consensus 76 ~l~~h~~~ 83 (89)
.+. |...
T Consensus 94 ~~~-~~~~ 100 (902)
T 2oaj_A 94 TVF-VPGK 100 (902)
T ss_dssp EEE-CSSC
T ss_pred EEc-CCCC
Confidence 664 4433
No 96
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.51 E-value=1.7e-13 Score=89.50 Aligned_cols=77 Identities=17% Similarity=0.195 Sum_probs=65.3
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeEe-------------cCCcceeec--------cEEEEEeC
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPVL-------------GKHTNTIVG--------QVLAIGTA 59 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~~-------------~~h~~~i~~--------~~las~s~ 59 (89)
.|.+.|++++|+| ++++||+|+.||.|++||..+++....+ .+|...|.+ .+|++++.
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 4778999999999 9999999999999999999887654433 258887776 58999999
Q ss_pred CCCEEEEeCCCCEEEeeeC
Q psy12376 60 RGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 60 d~~v~iwd~~~~~~~~~l~ 78 (89)
|+.|++||+.+++....+.
T Consensus 121 d~~i~iwd~~~~~~~~~~~ 139 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFN 139 (408)
T ss_dssp TSEEEEEETTTTEEEEEEE
T ss_pred CCeEEEeeCCCCccceecc
Confidence 9999999999888776654
No 97
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.51 E-value=7.7e-14 Score=93.63 Aligned_cols=81 Identities=10% Similarity=0.069 Sum_probs=67.2
Q ss_pred CcCCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeE---ecCCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPV---LGKHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~---~~~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
.|.+.|++++|+|+++ +|++|+.||.|++||+++++.... ..+|...|.+ ++|++++.|+.|+|||+.+
T Consensus 248 ~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 248 MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSS
T ss_pred cccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCC
Confidence 4677899999999986 788999999999999988664433 3568888876 7999999999999999998
Q ss_pred CEEEeeeCCCCC
Q psy12376 71 SKRVPVLGKHTK 82 (89)
Q Consensus 71 ~~~~~~l~~h~~ 82 (89)
+.....+..|..
T Consensus 328 ~~~~~~~~~~~~ 339 (435)
T 4e54_B 328 WDCPLGLIPHPH 339 (435)
T ss_dssp SSSEEEECCCCC
T ss_pred CccceEEecccc
Confidence 877776666653
No 98
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.51 E-value=4e-13 Score=88.10 Aligned_cols=78 Identities=17% Similarity=0.275 Sum_probs=65.2
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeEeeEec--CCcceeec--------cEEEEEeCCCCEEEEeCCC
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKRVPVLG--KHTNTIVG--------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~~~~~~--~h~~~i~~--------~~las~s~d~~v~iwd~~~ 70 (89)
+|.+.|++++|+|+| ++||+|+.||.|++||..+++....+. +|...|.+ ++|++++.|+.|++||+++
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 150 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG 150 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC
Confidence 467889999999999 899999999999999999877766665 68888876 6899999999999999986
Q ss_pred CEEEeeeCCC
Q psy12376 71 SKRVPVLGKH 80 (89)
Q Consensus 71 ~~~~~~l~~h 80 (89)
... ..+..|
T Consensus 151 ~~~-~~~~~~ 159 (383)
T 3ei3_B 151 SVI-QVFAKT 159 (383)
T ss_dssp CEE-EEEECC
T ss_pred Cce-EEEecc
Confidence 443 444333
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.51 E-value=3.2e-13 Score=90.39 Aligned_cols=82 Identities=21% Similarity=0.246 Sum_probs=69.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
+|...|++++|+ +.+|++|+.||.|++||..+++.+..+.+|...|.+ +++++|+.|++|++||+.+++....
T Consensus 157 ~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~ 234 (445)
T 2ovr_B 157 GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHV 234 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEE
T ss_pred CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence 466788999997 568999999999999999999888888889888877 7899999999999999988888888
Q ss_pred eCCCCCCCc
Q psy12376 77 LGKHTKSKP 85 (89)
Q Consensus 77 l~~h~~~~~ 85 (89)
+.+|...+.
T Consensus 235 ~~~~~~~v~ 243 (445)
T 2ovr_B 235 LMGHVAAVR 243 (445)
T ss_dssp EECCSSCEE
T ss_pred EcCCcccEE
Confidence 888876654
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.51 E-value=1.2e-13 Score=92.98 Aligned_cols=76 Identities=9% Similarity=0.047 Sum_probs=67.4
Q ss_pred cCCcEEEEEEccC---CCEEEEEeCCCcEEEEeCCCCeEeeE-ecCCcceeec------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 3 LRYYIFLLQTSQV---GQVLAIGTARGNLTVYNHMTSKRVPV-LGKHTNTIVG------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 3 ~~~~i~~~~~spd---g~~la~g~~~g~v~iwd~~~~~~~~~-~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~ 72 (89)
|...|++++|+|+ +++|++|+.|+.|++||+++++.+.. +.+|...|.+ ++|++++.|+.|+|||+++++
T Consensus 194 h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 194 HVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp CSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCC
T ss_pred ccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCc
Confidence 5678999999999 99999999999999999998887776 5689887776 699999999999999999988
Q ss_pred EEeeeC
Q psy12376 73 RVPVLG 78 (89)
Q Consensus 73 ~~~~l~ 78 (89)
.+..+.
T Consensus 274 ~~~~~~ 279 (450)
T 2vdu_B 274 NLSTFD 279 (450)
T ss_dssp EEEEEE
T ss_pred Eeeeec
Confidence 777664
No 101
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.51 E-value=1.4e-13 Score=96.93 Aligned_cols=81 Identities=12% Similarity=0.195 Sum_probs=64.2
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcce-----eec-------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNT-----IVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~-----i~~-------~~las~s~d~~v~iwd~~ 69 (89)
.+.+.|++++|||||+.||+++.||.|++||..+ .+..+. |... +.+ ++||+|+.||+|+|||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 3456799999999999999999999999999544 556666 6653 555 899999999999999998
Q ss_pred CCE-------EEeee----CCCCCCCc
Q psy12376 70 TSK-------RVPVL----GKHTKSKP 85 (89)
Q Consensus 70 ~~~-------~~~~l----~~h~~~~~ 85 (89)
++. .+..+ .+|...+.
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~ 186 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVT 186 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEE
T ss_pred CCccccccceeeeeeecccccccccEE
Confidence 774 34554 56766554
No 102
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.51 E-value=2.2e-13 Score=95.96 Aligned_cols=80 Identities=6% Similarity=0.122 Sum_probs=65.5
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe-------EeeEe----cCCcceeec------cEEEEEeCCCCEEEEeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK-------RVPVL----GKHTNTIVG------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~-------~~~~~----~~h~~~i~~------~~las~s~d~~v~iwd~ 68 (89)
.+.+++|||||++||+|+.||+|++||+.+++ .+..+ .+|...|.+ . +++++.|++|++||+
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~ 209 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTV 209 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECC
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEEC
Confidence 49999999999999999999999999998875 25565 677788887 7 999999999999999
Q ss_pred CCCEE---Eeee-CCCCCCCcC
Q psy12376 69 MTSKR---VPVL-GKHTKSKPS 86 (89)
Q Consensus 69 ~~~~~---~~~l-~~h~~~~~~ 86 (89)
.++.. ...+ .+|...+.+
T Consensus 210 ~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp CSSSSCCCEEEEECCCSSCCCC
T ss_pred CCCccccceeeecccccCcEEE
Confidence 87663 2345 477766654
No 103
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.51 E-value=3.5e-13 Score=89.39 Aligned_cols=77 Identities=18% Similarity=0.190 Sum_probs=68.1
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec--------cEEEEEe--CCCCEEEEeCCCC
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG--------QVLAIGT--ARGNLTVYNHMTS 71 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~--------~~las~s--~d~~v~iwd~~~~ 71 (89)
+|...|.+++|+|++++|++|+.||.|++||.++++.+..+..|...|.+ .++++++ .|+.|++||+.++
T Consensus 215 ~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 215 GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC
T ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC
Confidence 46778999999999999999999999999999999888888889888766 6788876 8999999999988
Q ss_pred EEEeeeC
Q psy12376 72 KRVPVLG 78 (89)
Q Consensus 72 ~~~~~l~ 78 (89)
+....+.
T Consensus 295 ~~~~~~~ 301 (401)
T 4aez_A 295 ARVNTVD 301 (401)
T ss_dssp CEEEEEE
T ss_pred CEEEEEe
Confidence 8877664
No 104
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=2.8e-13 Score=87.65 Aligned_cols=84 Identities=12% Similarity=0.264 Sum_probs=69.2
Q ss_pred CcCCcEEEEEEccC--CCEEEEEeCCCcEEEEeCCCCe--EeeEecCCcceeec---------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQV--GQVLAIGTARGNLTVYNHMTSK--RVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~spd--g~~la~g~~~g~v~iwd~~~~~--~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~ 68 (89)
.|...|++++|+|+ +++|++++.||.|++||..+++ .+..+..|...|.+ .+|++++.|+.|++||+
T Consensus 53 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 132 (379)
T 3jrp_A 53 GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 132 (379)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEec
Confidence 46788999999987 9999999999999999999887 66777888888876 47999999999999999
Q ss_pred CCCE--EEeeeCCCCCCCc
Q psy12376 69 MTSK--RVPVLGKHTKSKP 85 (89)
Q Consensus 69 ~~~~--~~~~l~~h~~~~~ 85 (89)
+.+. ....+..|...+.
T Consensus 133 ~~~~~~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 133 KENGTTSPIIIDAHAIGVN 151 (379)
T ss_dssp CTTSCCCEEEEECCTTCEE
T ss_pred CCCCceeeEEecCCCCceE
Confidence 8762 3334556665543
No 105
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.5e-13 Score=90.27 Aligned_cols=84 Identities=8% Similarity=0.160 Sum_probs=72.6
Q ss_pred cCCcEEEEEEccCC-CEEEEEeCCC---cEEEEeCCCC-eEeeEec-CCcceeec--------cEEEEEeCCCCEEEEeC
Q psy12376 3 LRYYIFLLQTSQVG-QVLAIGTARG---NLTVYNHMTS-KRVPVLG-KHTNTIVG--------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 3 ~~~~i~~~~~spdg-~~la~g~~~g---~v~iwd~~~~-~~~~~~~-~h~~~i~~--------~~las~s~d~~v~iwd~ 68 (89)
|...+.+++|+|++ .+|++++.++ .|++||.+++ +.+..+. +|...|.+ ++|++++.|+.|++||+
T Consensus 213 ~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~ 292 (416)
T 2pm9_A 213 IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNP 292 (416)
T ss_dssp CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECS
T ss_pred cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeC
Confidence 36779999999997 6999999999 9999999986 5667777 88887766 68999999999999999
Q ss_pred CCCEEEeeeCCCCCCCcC
Q psy12376 69 MTSKRVPVLGKHTKSKPS 86 (89)
Q Consensus 69 ~~~~~~~~l~~h~~~~~~ 86 (89)
++++.+..+..|...+.+
T Consensus 293 ~~~~~~~~~~~~~~~v~~ 310 (416)
T 2pm9_A 293 ESAEQLSQFPARGNWCFK 310 (416)
T ss_dssp SSCCEEEEEECSSSCCCC
T ss_pred CCCccceeecCCCCceEE
Confidence 999998888888876643
No 106
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.6e-13 Score=95.34 Aligned_cols=83 Identities=11% Similarity=0.042 Sum_probs=67.4
Q ss_pred CCcEEEEEEccC------CCEEEEEeCCCcEEEEeCCCCeE-----------eeEecCCcceeec------cEEEEEeCC
Q psy12376 4 RYYIFLLQTSQV------GQVLAIGTARGNLTVYNHMTSKR-----------VPVLGKHTNTIVG------QVLAIGTAR 60 (89)
Q Consensus 4 ~~~i~~~~~spd------g~~la~g~~~g~v~iwd~~~~~~-----------~~~~~~h~~~i~~------~~las~s~d 60 (89)
.+.|..++|+|+ +.+||+++.||+|++||+.+++. ...+.+|...|.+ .+|++|+.|
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~D 286 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKN 286 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETT
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCC
Confidence 467999999997 57999999999999999986642 2356788888877 689999999
Q ss_pred CCEEEEeCCCCE-EEeeeCCCCCCCcC
Q psy12376 61 GNLTVYNHMTSK-RVPVLGKHTKSKPS 86 (89)
Q Consensus 61 ~~v~iwd~~~~~-~~~~l~~h~~~~~~ 86 (89)
|+|++||++++. ....+.+|...+.+
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~s 313 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILS 313 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEE
T ss_pred CEEEEEECCCCCCceEEeecccccEEE
Confidence 999999998653 34457788887654
No 107
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.49 E-value=7.1e-13 Score=90.68 Aligned_cols=84 Identities=7% Similarity=-0.020 Sum_probs=74.4
Q ss_pred CcCCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEecCCcc---eeec--------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLGKHTN---TIVG--------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~~h~~---~i~~--------~~las~s~d~~v~iwd~~ 69 (89)
+|.+.|++++|+|+++ .|++++.||.|++||..+++.+..+.+|.. .|.+ ++|++++.|+.|++||++
T Consensus 158 ~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 158 GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 4667899999999998 899999999999999999999999999988 7876 489999999999999999
Q ss_pred CCEEEeee-C---CCCCCCc
Q psy12376 70 TSKRVPVL-G---KHTKSKP 85 (89)
Q Consensus 70 ~~~~~~~l-~---~h~~~~~ 85 (89)
+++....+ . .|...+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~ 257 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIF 257 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEE
T ss_pred CCCEeEEecccccccCCceE
Confidence 99888877 5 7776654
No 108
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.49 E-value=4.7e-13 Score=89.05 Aligned_cols=81 Identities=14% Similarity=0.246 Sum_probs=68.7
Q ss_pred CCcEEEEE--EccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 4 RYYIFLLQ--TSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 4 ~~~i~~~~--~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
...+.++. ++|++.+|++|+.||.|++||+++++.+..+.+ |...|.+ ++|++|+.|+.|++||+++++
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 168 NEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp CCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred ccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc
Confidence 34566666 678999999999999999999999999988887 7888877 789999999999999999998
Q ss_pred EEeeeC-CCCCCC
Q psy12376 73 RVPVLG-KHTKSK 84 (89)
Q Consensus 73 ~~~~l~-~h~~~~ 84 (89)
.+..+. .|...+
T Consensus 248 ~~~~~~~~~~~~v 260 (437)
T 3gre_A 248 LIRSWSFGDHAPI 260 (437)
T ss_dssp EEEEEBCTTCEEE
T ss_pred EEEEEecCCCCce
Confidence 888764 555443
No 109
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.48 E-value=1.8e-13 Score=88.08 Aligned_cols=81 Identities=19% Similarity=0.196 Sum_probs=68.8
Q ss_pred CcCCcEEEEEEccC---CCEEEEEeCCCcEEEEeCCCCe-EeeEecCCcceeec-------------cEEEEEeCCCCEE
Q psy12376 2 NLRYYIFLLQTSQV---GQVLAIGTARGNLTVYNHMTSK-RVPVLGKHTNTIVG-------------QVLAIGTARGNLT 64 (89)
Q Consensus 2 ~~~~~i~~~~~spd---g~~la~g~~~g~v~iwd~~~~~-~~~~~~~h~~~i~~-------------~~las~s~d~~v~ 64 (89)
+|..+|++++|+|+ |++|++|+.||.|++||..+++ .+..+.+|...|.+ ++|++++.|+.|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 35678999999999 7999999999999999999887 77888899887765 4999999999999
Q ss_pred EEeCCCCE-EEeeeCCCCC
Q psy12376 65 VYNHMTSK-RVPVLGKHTK 82 (89)
Q Consensus 65 iwd~~~~~-~~~~l~~h~~ 82 (89)
+||++++. ....+..|..
T Consensus 143 vwd~~~~~~~~~~~~~~~~ 161 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQG 161 (357)
T ss_dssp EECTTSCSSCSEEECCCTT
T ss_pred EEeCCCCCCcceeccccCC
Confidence 99998765 5566655544
No 110
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.48 E-value=2.9e-14 Score=96.74 Aligned_cols=82 Identities=15% Similarity=0.152 Sum_probs=65.4
Q ss_pred cCCcEEEEEEccCCCEEE----EEeCCCcEEEEeCCCC--------e---EeeEecCCcceeec--------cEEEEEeC
Q psy12376 3 LRYYIFLLQTSQVGQVLA----IGTARGNLTVYNHMTS--------K---RVPVLGKHTNTIVG--------QVLAIGTA 59 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la----~g~~~g~v~iwd~~~~--------~---~~~~~~~h~~~i~~--------~~las~s~ 59 (89)
+...|++++|+|+|++|| +|+.|+.|++||+.++ + .+..+.+|...|.+ ++|++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 345699999999999999 7888999999998654 1 24556678888876 68999999
Q ss_pred CCCEEEEeCCCCEEEeeeCCCCCCC
Q psy12376 60 RGNLTVYNHMTSKRVPVLGKHTKSK 84 (89)
Q Consensus 60 d~~v~iwd~~~~~~~~~l~~h~~~~ 84 (89)
|++|++||++++.......+|...+
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v 195 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAV 195 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCE
T ss_pred CCeEEEEEcCCCcceeeccCCCCce
Confidence 9999999999887665555565544
No 111
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.48 E-value=3.8e-13 Score=90.10 Aligned_cols=79 Identities=14% Similarity=0.193 Sum_probs=61.2
Q ss_pred cEEEEEEccCCCEE------------EEEeCCCcEEEEeCCCCeEeeEe-----cCCcceeec-----cEEEEEeCCCCE
Q psy12376 6 YIFLLQTSQVGQVL------------AIGTARGNLTVYNHMTSKRVPVL-----GKHTNTIVG-----QVLAIGTARGNL 63 (89)
Q Consensus 6 ~i~~~~~spdg~~l------------a~g~~~g~v~iwd~~~~~~~~~~-----~~h~~~i~~-----~~las~s~d~~v 63 (89)
.+.+++|||||+++ ++|+.|++|++||..+++.+..+ .+|...+.+ .++|+++.|++|
T Consensus 228 ~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTI 307 (356)
T 2w18_A 228 SVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTI 307 (356)
T ss_dssp CCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCE
T ss_pred eeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcE
Confidence 46788999999986 66888999999999999877654 366655443 479999999999
Q ss_pred EEEeCCCCEEEeeeCCCCCCC
Q psy12376 64 TVYNHMTSKRVPVLGKHTKSK 84 (89)
Q Consensus 64 ~iwd~~~~~~~~~l~~h~~~~ 84 (89)
+|||+.+++..+.+.+|...+
T Consensus 308 kIWDl~tGk~l~tL~gH~~~v 328 (356)
T 2w18_A 308 AIWDLLLGQCTALLPPVSDQH 328 (356)
T ss_dssp EEEETTTCSEEEEECCC--CC
T ss_pred EEEECCCCcEEEEecCCCCCe
Confidence 999999999999999887653
No 112
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.48 E-value=2.1e-13 Score=89.26 Aligned_cols=76 Identities=21% Similarity=0.311 Sum_probs=68.1
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC---C---cceeec-------cEEEEEeCC---CCEEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK---H---TNTIVG-------QVLAIGTAR---GNLTVY 66 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~---h---~~~i~~-------~~las~s~d---~~v~iw 66 (89)
+...+++++|+|++ +|++++.||.|++||+++++.+..+.. | ...|.+ ++|++++.| +.|++|
T Consensus 185 ~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~ 263 (397)
T 1sq9_A 185 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 263 (397)
T ss_dssp SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred CCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEE
Confidence 45679999999999 999999999999999999999888888 8 888776 799999999 999999
Q ss_pred eCCCCEEEeeeCC
Q psy12376 67 NHMTSKRVPVLGK 79 (89)
Q Consensus 67 d~~~~~~~~~l~~ 79 (89)
|+++++....+..
T Consensus 264 d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 264 ETEFGERIGSLSV 276 (397)
T ss_dssp ETTTCCEEEEECB
T ss_pred ECCCCcccceecc
Confidence 9998888888877
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.47 E-value=4e-13 Score=90.11 Aligned_cols=84 Identities=11% Similarity=0.120 Sum_probs=70.2
Q ss_pred CcCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCC---eEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTS---KRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~---~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~ 69 (89)
.|...|.+++|+| ++.+|++++.||.|++||++++ +.+..+..|...|.+ .+|++|+.|+.|++||++
T Consensus 229 ~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~ 308 (430)
T 2xyi_A 229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 308 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCC
Confidence 4667899999999 6789999999999999999976 456677789888877 379999999999999998
Q ss_pred C-CEEEeeeCCCCCCCc
Q psy12376 70 T-SKRVPVLGKHTKSKP 85 (89)
Q Consensus 70 ~-~~~~~~l~~h~~~~~ 85 (89)
. +..+..+..|...+.
T Consensus 309 ~~~~~~~~~~~h~~~v~ 325 (430)
T 2xyi_A 309 NLKLKLHSFESHKDEIF 325 (430)
T ss_dssp CTTSCSEEEECCSSCEE
T ss_pred CCCCCeEEeecCCCCEE
Confidence 6 556677777876654
No 114
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.46 E-value=3.2e-13 Score=89.62 Aligned_cols=80 Identities=10% Similarity=0.139 Sum_probs=67.0
Q ss_pred CcCCcEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeE----eeEecCCcc------------eeec-------cEEEEE
Q psy12376 2 NLRYYIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKR----VPVLGKHTN------------TIVG-------QVLAIG 57 (89)
Q Consensus 2 ~~~~~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~----~~~~~~h~~------------~i~~-------~~las~ 57 (89)
.|...|++++|+|++ ++|++|+.||.|++||+++++. +..+..|.. .|.+ ++|+++
T Consensus 224 ~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 224 ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe
Confidence 356779999999999 9999999999999999998876 677888775 6665 789999
Q ss_pred eCCCCEEEEeCCC-CEEEeeeCCCCC
Q psy12376 58 TARGNLTVYNHMT-SKRVPVLGKHTK 82 (89)
Q Consensus 58 s~d~~v~iwd~~~-~~~~~~l~~h~~ 82 (89)
+. +.|+|||++. ++.+..+..|..
T Consensus 304 ~~-~~v~iwd~~~~~~~~~~~~~~~~ 328 (447)
T 3dw8_B 304 DY-LSVKVWDLNMENRPVETYQVHEY 328 (447)
T ss_dssp ES-SEEEEEETTCCSSCSCCEESCGG
T ss_pred eC-CeEEEEeCCCCccccceeecccc
Confidence 98 9999999986 777777777754
No 115
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.3e-12 Score=84.05 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=66.2
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.+.+++|+|++++|++++.||.|.+||.++ ++.+..+..|...|.+ ++|++++.|+.|++||+++++....+
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 799999999999999999999999999998 7888888889888876 78999999999999999988777665
Q ss_pred C
Q psy12376 78 G 78 (89)
Q Consensus 78 ~ 78 (89)
.
T Consensus 257 ~ 257 (369)
T 3zwl_B 257 E 257 (369)
T ss_dssp E
T ss_pred c
Confidence 4
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=3.6e-13 Score=90.61 Aligned_cols=84 Identities=8% Similarity=0.013 Sum_probs=70.1
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEee----EecCCcceeec-----c-----EEEEEeCCCCEEEEeC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVP----VLGKHTNTIVG-----Q-----VLAIGTARGNLTVYNH 68 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~----~~~~h~~~i~~-----~-----~las~s~d~~v~iwd~ 68 (89)
+...+++++|+|+|++|++|+.+|.+.+|++.+++... .+.+|...|.+ . +|++|+.|+.|++||+
T Consensus 148 ~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 148 FSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHY 227 (450)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEE
T ss_pred CCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEEC
Confidence 45679999999999999999999999999998876543 56678887776 4 8999999999999999
Q ss_pred CCCEEEee-eCCCCCCCcC
Q psy12376 69 MTSKRVPV-LGKHTKSKPS 86 (89)
Q Consensus 69 ~~~~~~~~-l~~h~~~~~~ 86 (89)
.++..... +.+|...+.+
T Consensus 228 ~~~~~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 228 PQCFIVDKWLFGHKHFVSS 246 (450)
T ss_dssp SCTTCEEEECCCCSSCEEE
T ss_pred CCCceeeeeecCCCCceEE
Confidence 88776665 6688876543
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.45 E-value=7.1e-13 Score=88.90 Aligned_cols=84 Identities=17% Similarity=0.245 Sum_probs=69.3
Q ss_pred CcCCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCC-CeEeeEecCCcceeec--------cEEEEEeCCCCEEEEeCCC-
Q psy12376 2 NLRYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMT-SKRVPVLGKHTNTIVG--------QVLAIGTARGNLTVYNHMT- 70 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~-~~~~~~~~~h~~~i~~--------~~las~s~d~~v~iwd~~~- 70 (89)
.|...|++++|+|+++ +||+|+.||.|++||.++ ++.+..+..|...|.+ .+|++++.|+.|+|||+..
T Consensus 275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 3567799999999997 789999999999999987 5567788889888876 4799999999999999975
Q ss_pred -------------CEEEeeeCCCCCCCc
Q psy12376 71 -------------SKRVPVLGKHTKSKP 85 (89)
Q Consensus 71 -------------~~~~~~l~~h~~~~~ 85 (89)
.+....+.+|...+.
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 382 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKIS 382 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEE
T ss_pred ccccCccccccCCcceEEEcCCCCCCce
Confidence 255566677776543
No 118
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.44 E-value=2.7e-13 Score=87.23 Aligned_cols=83 Identities=12% Similarity=0.173 Sum_probs=67.5
Q ss_pred cCCcEEEEEEcc---CCCEEEEEeCCCcEEEEeCCCCeEeeEec-----CCcceeec-------c-EEEEEeCCCCEEEE
Q psy12376 3 LRYYIFLLQTSQ---VGQVLAIGTARGNLTVYNHMTSKRVPVLG-----KHTNTIVG-------Q-VLAIGTARGNLTVY 66 (89)
Q Consensus 3 ~~~~i~~~~~sp---dg~~la~g~~~g~v~iwd~~~~~~~~~~~-----~h~~~i~~-------~-~las~s~d~~v~iw 66 (89)
+...+.+++|+| ++.+|++++.||.|++||.++++....+. +|...|.+ + +|++++.|+.|++|
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 287 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLW 287 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEe
Confidence 567899999999 99999999999999999998876554443 88888876 4 89999999999999
Q ss_pred eCCCC-------------------EEEeeeCCCCCCCc
Q psy12376 67 NHMTS-------------------KRVPVLGKHTKSKP 85 (89)
Q Consensus 67 d~~~~-------------------~~~~~l~~h~~~~~ 85 (89)
|++.+ +.+..+.+|...+.
T Consensus 288 d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 325 (357)
T 3i2n_A 288 KYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPIS 325 (357)
T ss_dssp EEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEE
T ss_pred ecCCCcccccccCCCCccccccccceeeccccCCCCee
Confidence 99753 34556677776543
No 119
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.44 E-value=1.6e-12 Score=84.75 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=69.4
Q ss_pred cCCcEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec----------cEEEEEeCCCCEEEEeCCCC
Q psy12376 3 LRYYIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG----------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 3 ~~~~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~----------~~las~s~d~~v~iwd~~~~ 71 (89)
|...|++++|+| ++.+|++++.||.|++||..+++....+. +...+.+ .++++++.|+.|++||++++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 176 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG 176 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc
Confidence 677899999999 77899999999999999999998877665 3343333 48999999999999999988
Q ss_pred EEEeeeCCCCCCCc
Q psy12376 72 KRVPVLGKHTKSKP 85 (89)
Q Consensus 72 ~~~~~l~~h~~~~~ 85 (89)
+....+..|...+.
T Consensus 177 ~~~~~~~~~~~~v~ 190 (408)
T 4a11_B 177 SCSHILQGHRQEIL 190 (408)
T ss_dssp CCCEEECCCCSCEE
T ss_pred ceeeeecCCCCcEE
Confidence 88888888887654
No 120
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.43 E-value=6.2e-14 Score=97.42 Aligned_cols=85 Identities=12% Similarity=0.077 Sum_probs=68.9
Q ss_pred CcCCcEEEE--EEccCC-CEEEEEeCCCcEEEEeCCCCeEeeEecCCcc--eeec-------cEEEEEeCCCCEEEEeCC
Q psy12376 2 NLRYYIFLL--QTSQVG-QVLAIGTARGNLTVYNHMTSKRVPVLGKHTN--TIVG-------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 2 ~~~~~i~~~--~~spdg-~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~--~i~~-------~~las~s~d~~v~iwd~~ 69 (89)
.|.+.|+++ .|+|+| .+||+++.||+|+|||+++++....+.+|.. .+.+ +.|++++.|++|++||++
T Consensus 306 ~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~ 385 (524)
T 2j04_B 306 VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSR 385 (524)
T ss_dssp CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETT
T ss_pred cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECc
Confidence 467789999 678998 8999999999999999998776666655542 2332 689999999999999999
Q ss_pred CCEEEeeeCCCCCCCcC
Q psy12376 70 TSKRVPVLGKHTKSKPS 86 (89)
Q Consensus 70 ~~~~~~~l~~h~~~~~~ 86 (89)
++.....+.+|...+.+
T Consensus 386 ~~~~~~~l~gH~~~V~s 402 (524)
T 2j04_B 386 AAFAVHPLVSRETTITA 402 (524)
T ss_dssp CTTCCEEEEECSSCEEE
T ss_pred ccccceeeecCCCceEE
Confidence 88877777789887654
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.43 E-value=1.7e-13 Score=91.24 Aligned_cols=77 Identities=12% Similarity=-0.007 Sum_probs=60.3
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCeEe-----eEecCCcceeec---------------cEEEEEeCCCCEEEEeCC
Q psy12376 10 LQTSQVGQVLAIGTARGNLTVYNHMTSKRV-----PVLGKHTNTIVG---------------QVLAIGTARGNLTVYNHM 69 (89)
Q Consensus 10 ~~~spdg~~la~g~~~g~v~iwd~~~~~~~-----~~~~~h~~~i~~---------------~~las~s~d~~v~iwd~~ 69 (89)
..+++++.+||+++.|++|++||.++++.. ..+.+|.+.|.+ ++|||||.|++|+|||++
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 344556778999999999999999887653 235789998876 489999999999999998
Q ss_pred CCEEEeeeCCCCCCCcC
Q psy12376 70 TSKRVPVLGKHTKSKPS 86 (89)
Q Consensus 70 ~~~~~~~l~~h~~~~~~ 86 (89)
++.....+.+|...+.+
T Consensus 175 ~~~~~~~~~~~~~~v~~ 191 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGIS 191 (393)
T ss_dssp TTEEEEEEEECSSCEEE
T ss_pred CCceeeeecCCCCCcEE
Confidence 87777767677665543
No 122
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.9e-12 Score=92.49 Aligned_cols=83 Identities=12% Similarity=0.271 Sum_probs=69.2
Q ss_pred CcCCcEEEEEEccC--CCEEEEEeCCCcEEEEeCCCCe--EeeEecCCcceeec---------cEEEEEeCCCCEEEEeC
Q psy12376 2 NLRYYIFLLQTSQV--GQVLAIGTARGNLTVYNHMTSK--RVPVLGKHTNTIVG---------QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 2 ~~~~~i~~~~~spd--g~~la~g~~~g~v~iwd~~~~~--~~~~~~~h~~~i~~---------~~las~s~d~~v~iwd~ 68 (89)
+|.++|++++|+|+ +++|++|+.||.|++||..+++ .+..+.+|...|.+ +++++|+.|+.|++||+
T Consensus 51 ~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl 130 (753)
T 3jro_A 51 GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 130 (753)
T ss_dssp CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEe
Confidence 47788999999998 9999999999999999999886 66777889888877 48999999999999999
Q ss_pred CCCE--EEeeeCCCCCCC
Q psy12376 69 MTSK--RVPVLGKHTKSK 84 (89)
Q Consensus 69 ~~~~--~~~~l~~h~~~~ 84 (89)
+++. ....+.+|...+
T Consensus 131 ~~~~~~~~~~~~~~~~~v 148 (753)
T 3jro_A 131 KENGTTSPIIIDAHAIGV 148 (753)
T ss_dssp CSSSCCCCEEEECCSSCE
T ss_pred ecCCCcceeEeecCCCce
Confidence 8662 333455666554
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.35 E-value=5.7e-12 Score=84.43 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=53.2
Q ss_pred CCcEEEEEEcc---CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc---eeec-------cE------------EEEEe
Q psy12376 4 RYYIFLLQTSQ---VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN---TIVG-------QV------------LAIGT 58 (89)
Q Consensus 4 ~~~i~~~~~sp---dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~---~i~~-------~~------------las~s 58 (89)
...++.++|+| +++.||+|+.|++|+|||.++|+.++.+.+|.. .+.+ ++ +++|+
T Consensus 178 ~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs 257 (356)
T 2w18_A 178 PPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRS 257 (356)
T ss_dssp CCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------
T ss_pred CCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccC
Confidence 34456677777 567899999999999999999999998876543 2221 22 58899
Q ss_pred CCCCEEEEeCCCCEEEeee
Q psy12376 59 ARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 59 ~d~~v~iwd~~~~~~~~~l 77 (89)
.|++|++||..+++.+..+
T Consensus 258 ~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 258 PVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp CCEEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEECCCCEEEEEE
Confidence 9999999999999877654
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.31 E-value=2.1e-11 Score=80.21 Aligned_cols=75 Identities=16% Similarity=0.176 Sum_probs=58.9
Q ss_pred EEEccCCCEEEE--EeCCCcEEEEeCCCCe----------------EeeEecCCcceeec-------cEEEEEeCCCC-E
Q psy12376 10 LQTSQVGQVLAI--GTARGNLTVYNHMTSK----------------RVPVLGKHTNTIVG-------QVLAIGTARGN-L 63 (89)
Q Consensus 10 ~~~spdg~~la~--g~~~g~v~iwd~~~~~----------------~~~~~~~h~~~i~~-------~~las~s~d~~-v 63 (89)
++++| .++|+ |+.+|.|++||.++++ .+..+.+|...|.+ ++||+|+.|++ |
T Consensus 143 ~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 143 CEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred EEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 34444 45655 5889999999998765 26778899999887 79999999999 9
Q ss_pred EEEeCCCCEEEeeeC-C-CCCCCcC
Q psy12376 64 TVYNHMTSKRVPVLG-K-HTKSKPS 86 (89)
Q Consensus 64 ~iwd~~~~~~~~~l~-~-h~~~~~~ 86 (89)
+|||+++++.+..+. + |...+.+
T Consensus 221 ~iwd~~~~~~~~~~~~g~h~~~v~~ 245 (355)
T 3vu4_A 221 RVFKTEDGVLVREFRRGLDRADVVD 245 (355)
T ss_dssp EEEETTTCCEEEEEECTTCCSCEEE
T ss_pred EEEECCCCcEEEEEEcCCCCCcEEE
Confidence 999999998888876 4 8876543
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.25 E-value=7.2e-11 Score=78.18 Aligned_cols=78 Identities=6% Similarity=0.002 Sum_probs=65.8
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEE-EEEeCCCCEEEEeCCCCEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVL-AIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~l-as~s~d~~v~iwd~~~~~~~ 74 (89)
|...+.+++|+|+|.++++++.|+.|++||.++++.+..+..|...+.+ +++ ++++.|+.|++||+++++..
T Consensus 168 ~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 168 KLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI 247 (433)
T ss_dssp TCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred cCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE
Confidence 4567999999999999999999999999999999888888888776655 444 67778999999999988887
Q ss_pred eeeCCC
Q psy12376 75 PVLGKH 80 (89)
Q Consensus 75 ~~l~~h 80 (89)
..+..+
T Consensus 248 ~~~~~~ 253 (433)
T 3bws_A 248 RKTDKI 253 (433)
T ss_dssp EECCCC
T ss_pred EEecCC
Confidence 766554
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.19 E-value=4.5e-10 Score=73.49 Aligned_cols=80 Identities=6% Similarity=-0.037 Sum_probs=64.5
Q ss_pred CCcEEEEEEccCCCEEEEEe---CCCcEEEEeCCCCeEeeEecCCcceeec------cEE-EEEeCCCCEEEEeCCCCEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGT---ARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVL-AIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~---~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~l-as~s~d~~v~iwd~~~~~~ 73 (89)
...+.+++|+|+|++|++++ .++.|.+||..+++.+..+..|..+... +++ ++++.|+.|++||+.+++.
T Consensus 199 ~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 45688999999999998888 6899999999999888888776553221 445 7889999999999999998
Q ss_pred EeeeCCCCCC
Q psy12376 74 VPVLGKHTKS 83 (89)
Q Consensus 74 ~~~l~~h~~~ 83 (89)
...+..|..+
T Consensus 279 ~~~~~~~~~~ 288 (391)
T 1l0q_A 279 TATMAVGKNP 288 (391)
T ss_dssp EEEEECSSSE
T ss_pred EEEEECCcCC
Confidence 8877665443
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.18 E-value=3.3e-10 Score=74.14 Aligned_cols=76 Identities=9% Similarity=0.101 Sum_probs=60.6
Q ss_pred CcEEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cE-EEEEeCCCCEEEEeCCCCEEEe
Q psy12376 5 YYIFLLQTSQVGQVL-AIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QV-LAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 5 ~~i~~~~~spdg~~l-a~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~-las~s~d~~v~iwd~~~~~~~~ 75 (89)
..+.+++|+|+|+++ ++++.++.|++||..+++.+..+..+. .+.+ ++ +++++.|+.|++||+.+++...
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 458999999999977 677789999999999999888877655 4443 44 4666788999999999998877
Q ss_pred eeCCCC
Q psy12376 76 VLGKHT 81 (89)
Q Consensus 76 ~l~~h~ 81 (89)
.+..|.
T Consensus 111 ~~~~~~ 116 (391)
T 1l0q_A 111 TVKTGK 116 (391)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 765543
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.18 E-value=3.1e-11 Score=79.94 Aligned_cols=80 Identities=8% Similarity=-0.017 Sum_probs=65.2
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEee-----EecCCcceeec-------cEEEEEeCCCCEEEEeCCCCE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVP-----VLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~-----~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~ 72 (89)
..+.+++|+|++.++++++.++.|.+||..+++... .+.+|...+.+ .++++++.|+.|++||+++++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 345689999987888888889999999999988776 34467777665 789999999999999999888
Q ss_pred EEeeeCCCCCCC
Q psy12376 73 RVPVLGKHTKSK 84 (89)
Q Consensus 73 ~~~~l~~h~~~~ 84 (89)
....+..|...+
T Consensus 203 ~~~~~~~~~~~~ 214 (433)
T 3bws_A 203 YKATVDLTGKWS 214 (433)
T ss_dssp EEEEEECSSSSE
T ss_pred EEEEEcCCCCCe
Confidence 877777666543
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.11 E-value=1.4e-09 Score=73.06 Aligned_cols=79 Identities=14% Similarity=0.016 Sum_probs=60.0
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCC---cEEEEeCCCCeEeeEecCCcceeec-------cEEE-EEeCCCC--EEEEeCC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARG---NLTVYNHMTSKRVPVLGKHTNTIVG-------QVLA-IGTARGN--LTVYNHM 69 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g---~v~iwd~~~~~~~~~~~~h~~~i~~-------~~la-s~s~d~~--v~iwd~~ 69 (89)
+...+.+++|||||++||.++.++ .|++||+.+++.. .+..|...+.+ ++|+ +++.|+. |++||+.
T Consensus 177 ~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 177 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 456799999999999999999875 9999999988764 45566665544 5566 7777665 9999998
Q ss_pred CCEEEeeeCCCCCC
Q psy12376 70 TSKRVPVLGKHTKS 83 (89)
Q Consensus 70 ~~~~~~~l~~h~~~ 83 (89)
+++. ..+..|...
T Consensus 256 ~~~~-~~l~~~~~~ 268 (415)
T 2hqs_A 256 SGQI-RQVTDGRSN 268 (415)
T ss_dssp TCCE-EECCCCSSC
T ss_pred CCCE-EeCcCCCCc
Confidence 8776 445556543
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.97 E-value=5.1e-09 Score=76.99 Aligned_cols=79 Identities=14% Similarity=0.158 Sum_probs=62.6
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCC----------CEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARG----------NLTV 65 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~----------~v~i 65 (89)
+...+..++|||||++||+++.++.|++||..+++......+|...+.+ ++|++++.++ .|++
T Consensus 377 ~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 377 NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE
Confidence 3456899999999999999999999999999999877777677665543 6788776654 8999
Q ss_pred EeCCCCEEEeeeCCCCC
Q psy12376 66 YNHMTSKRVPVLGKHTK 82 (89)
Q Consensus 66 wd~~~~~~~~~l~~h~~ 82 (89)
||+.+++ ...+..|..
T Consensus 457 ~d~~~g~-~~~l~~~~~ 472 (1045)
T 1k32_A 457 YDMEGRK-IFAATTENS 472 (1045)
T ss_dssp EETTTTE-EEECSCSSS
T ss_pred EECCCCc-EEEeeCCCc
Confidence 9998887 455555543
No 131
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.94 E-value=1.8e-08 Score=64.12 Aligned_cols=71 Identities=11% Similarity=0.114 Sum_probs=55.9
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcce--eec----cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNT--IVG----QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~--i~~----~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
.+.+++|+|||++++++ ++.|.+||..+++.+..+..+..+ +.. ++|++++.++.|.+||+.+++.+..+.
T Consensus 242 ~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp CEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred ceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 46789999999999888 799999999999887766533222 111 678888899999999999888777654
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.83 E-value=2.1e-08 Score=62.35 Aligned_cols=82 Identities=6% Similarity=-0.131 Sum_probs=58.2
Q ss_pred cCCcEEEEEEccCCCEEEEEe-CCCcEEEEeCC-CCeEeeEecCCcceeec-------cEEEEEeCC-----------CC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGT-ARGNLTVYNHM-TSKRVPVLGKHTNTIVG-------QVLAIGTAR-----------GN 62 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~-~~g~v~iwd~~-~~~~~~~~~~h~~~i~~-------~~las~s~d-----------~~ 62 (89)
+...+.+++|+|+|++|+.++ .++.+.+|+.. .+..+..+..|...+.+ ++|++++.+ +.
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 345689999999999888766 48899999875 45556677777665543 677777765 56
Q ss_pred EEEEeCCCCEEE--eeeCCCCCCC
Q psy12376 63 LTVYNHMTSKRV--PVLGKHTKSK 84 (89)
Q Consensus 63 v~iwd~~~~~~~--~~l~~h~~~~ 84 (89)
|++||+.+++.. ..+.+|...+
T Consensus 251 l~~~d~~~~~~~~~~~~~~~~~~~ 274 (297)
T 2ojh_A 251 VQLMDMDGGNVETLFDLFGGQGTM 274 (297)
T ss_dssp EEEEETTSCSCEEEEEEEESTTTS
T ss_pred EEEEecCCCCceeeeccCCCCccc
Confidence 999999876543 3333555443
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.78 E-value=2.8e-08 Score=69.99 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=57.0
Q ss_pred CcEEEEEEccCCCEEEEEeC-CC-----cEEEEeCCCCeEeeEecCCcc------------------------eeec---
Q psy12376 5 YYIFLLQTSQVGQVLAIGTA-RG-----NLTVYNHMTSKRVPVLGKHTN------------------------TIVG--- 51 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~-~g-----~v~iwd~~~~~~~~~~~~h~~------------------------~i~~--- 51 (89)
..+.+++|||||++||+++. +| .|.+||..+++....+..+.. .+.+
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 35899999999999999998 88 899999999887665543321 1332
Q ss_pred ----cEEEEEeCCCCEEEEeCCCCE--EEeeeCCCCCC
Q psy12376 52 ----QVLAIGTARGNLTVYNHMTSK--RVPVLGKHTKS 83 (89)
Q Consensus 52 ----~~las~s~d~~v~iwd~~~~~--~~~~l~~h~~~ 83 (89)
++|++++. +.|++||+.++. ....+..|...
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~ 153 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGF 153 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSC
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcc
Confidence 78888876 999999998772 22334445433
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.77 E-value=1.9e-07 Score=59.72 Aligned_cols=72 Identities=17% Similarity=0.096 Sum_probs=55.9
Q ss_pred cEEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcce--eec----cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 6 YIFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNT--IVG----QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 6 ~i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~--i~~----~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
.+..++|+| ||++++++ ++.|.+||..+++.+..+.....+ +.. ++|++++.++.|.+||+++++.+..+.
T Consensus 256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeee
Confidence 467899999 99999888 889999999999877666432221 211 567778889999999999988877664
Q ss_pred C
Q psy12376 79 K 79 (89)
Q Consensus 79 ~ 79 (89)
-
T Consensus 334 ~ 334 (349)
T 1jmx_B 334 L 334 (349)
T ss_dssp C
T ss_pred c
Confidence 3
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.77 E-value=3.6e-08 Score=66.17 Aligned_cols=81 Identities=10% Similarity=0.000 Sum_probs=59.6
Q ss_pred CCcEEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCC---CEEEEeCCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTAR---GNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARG---NLTVYNHMT 70 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~---g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~---~v~iwd~~~ 70 (89)
...+..++|||||++|+.++.+ ..|.+||..+++. ..+..+. .+.+ ++|++++.|+ .|++||+..
T Consensus 310 ~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 310 GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 3468899999999999888764 5899999998875 4455543 3332 6788888777 799999974
Q ss_pred CEEEeeeCCCCCCCcCC
Q psy12376 71 SKRVPVLGKHTKSKPST 87 (89)
Q Consensus 71 ~~~~~~l~~h~~~~~~~ 87 (89)
.....+..|...+.++
T Consensus 388 -~~~~~l~~~~~~v~~~ 403 (415)
T 2hqs_A 388 -RFKARLPATDGQVKFP 403 (415)
T ss_dssp -CCEEECCCSSSEEEEE
T ss_pred -CcEEEeeCCCCCCcCC
Confidence 4456677787766543
No 136
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.74 E-value=2.1e-08 Score=69.27 Aligned_cols=74 Identities=15% Similarity=0.002 Sum_probs=59.1
Q ss_pred EEEEEccCCCEEEEEeCC----CcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCC--CEEEEeCCCCEEE
Q psy12376 8 FLLQTSQVGQVLAIGTAR----GNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARG--NLTVYNHMTSKRV 74 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~----g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~--~v~iwd~~~~~~~ 74 (89)
.+++|||||++||.++.+ +.|++||..+++. ..+..|...+.. ++|++++.++ .|++||+.+++..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 578999999999988777 7899999988764 466777665544 7888888888 8999999988876
Q ss_pred eeeCCCCCC
Q psy12376 75 PVLGKHTKS 83 (89)
Q Consensus 75 ~~l~~h~~~ 83 (89)
.+..|...
T Consensus 232 -~~~~~~~~ 239 (582)
T 3o4h_A 232 -DLELPSKD 239 (582)
T ss_dssp -ECCCSCSH
T ss_pred -EccCCCcC
Confidence 66666544
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.74 E-value=6.3e-08 Score=67.42 Aligned_cols=78 Identities=10% Similarity=0.130 Sum_probs=58.8
Q ss_pred cEEEEEEccCCCEEEEE-eCCCcEEEEeCCCCeEeeEecC----Ccce-e--ec----cEEEEEe-CCCCEEEEeCCC--
Q psy12376 6 YIFLLQTSQVGQVLAIG-TARGNLTVYNHMTSKRVPVLGK----HTNT-I--VG----QVLAIGT-ARGNLTVYNHMT-- 70 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g-~~~g~v~iwd~~~~~~~~~~~~----h~~~-i--~~----~~las~s-~d~~v~iwd~~~-- 70 (89)
.+..++|+|||++|+++ ..+++|.+||..+++.+..+.. |.+. + .. ..++++. .|++|.+||..+
T Consensus 325 ~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~ 404 (543)
T 1nir_A 325 FLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKN 404 (543)
T ss_dssp SCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred CccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCC
Confidence 35578999999976554 5688999999999998877653 5422 1 11 5677775 689999999988
Q ss_pred -----CEEEeeeCCCCCC
Q psy12376 71 -----SKRVPVLGKHTKS 83 (89)
Q Consensus 71 -----~~~~~~l~~h~~~ 83 (89)
.++++.+..|...
T Consensus 405 ~~~~~~~~v~~l~~~g~~ 422 (543)
T 1nir_A 405 HPQYAWKKVAELQGQGGG 422 (543)
T ss_dssp CTTTBTSEEEEEECSCSC
T ss_pred CchhcCeEEEEEEcCCCC
Confidence 7888888777654
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.67 E-value=5.1e-07 Score=57.87 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=56.9
Q ss_pred EEEEEEccCCCEEEEEe--CCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 7 IFLLQTSQVGQVLAIGT--ARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 7 i~~~~~spdg~~la~g~--~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+.+++|+|+|++++++. .++.|.+||..+++.+..+..+...+.+ ++++.++.++.|.+||..+++....+
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 68899999999887776 4789999999999888777633322222 77888889999999999998877655
Q ss_pred C
Q psy12376 78 G 78 (89)
Q Consensus 78 ~ 78 (89)
.
T Consensus 223 ~ 223 (353)
T 3vgz_A 223 K 223 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.63 E-value=3.6e-07 Score=56.70 Aligned_cols=69 Identities=14% Similarity=0.027 Sum_probs=49.5
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCC-CeEeeEecCCc-ceeec-------cEEEEEe--CCCCEEEEe--CC
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHT-NTIVG-------QVLAIGT--ARGNLTVYN--HM 69 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~-~~~~~~~~~h~-~~i~~-------~~las~s--~d~~v~iwd--~~ 69 (89)
+...+.+++|+|||++|+++. ++.|.+||..+ ++.......+. ..+.+ ++|++++ .++...||. +.
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~ 118 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST 118 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT
T ss_pred CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC
Confidence 456789999999999999987 78999999998 77666555553 33433 7888888 334555554 44
Q ss_pred CCE
Q psy12376 70 TSK 72 (89)
Q Consensus 70 ~~~ 72 (89)
++.
T Consensus 119 ~~~ 121 (297)
T 2ojh_A 119 GGT 121 (297)
T ss_dssp CCC
T ss_pred CCc
Confidence 444
No 140
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.62 E-value=5.5e-07 Score=62.67 Aligned_cols=73 Identities=8% Similarity=0.110 Sum_probs=57.7
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeC--CCCeEeeEecCCcce----ee-----c-cEEEEEe-CCCCEEEEeCCCCEE
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNH--MTSKRVPVLGKHTNT----IV-----G-QVLAIGT-ARGNLTVYNHMTSKR 73 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~--~~~~~~~~~~~h~~~----i~-----~-~~las~s-~d~~v~iwd~~~~~~ 73 (89)
+.+++|||||++|++++.++.|.+||. .+++.+..+..+..+ +. . +++++++ .+++|.|||..+++.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 778999999999999999999999999 788887777643322 11 2 4676666 589999999998887
Q ss_pred EeeeCC
Q psy12376 74 VPVLGK 79 (89)
Q Consensus 74 ~~~l~~ 79 (89)
+..+..
T Consensus 261 ~~~i~~ 266 (543)
T 1nir_A 261 KQIVST 266 (543)
T ss_dssp EEEEEC
T ss_pred ceeecc
Confidence 776643
No 141
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.61 E-value=3.3e-07 Score=59.73 Aligned_cols=69 Identities=17% Similarity=0.106 Sum_probs=53.0
Q ss_pred EEEccCCCEEEEEeC-CC--cEEEEeCCCCeEeeEecCCccee----ec---cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 10 LQTSQVGQVLAIGTA-RG--NLTVYNHMTSKRVPVLGKHTNTI----VG---QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 10 ~~~spdg~~la~g~~-~g--~v~iwd~~~~~~~~~~~~h~~~i----~~---~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
.+|||||++||..+. +| .|.+||..+++......++...+ .+ ++|+.++.++.|++||+.+++......
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 789999999998887 66 48888998887665555554333 22 789999999999999999887655443
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.61 E-value=1.5e-07 Score=66.27 Aligned_cols=72 Identities=18% Similarity=0.135 Sum_probs=55.7
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCe--EeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSK--RVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~--~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+.+++|||||++|+.++. +.|.+||..+++ .+..+..|...+.+ ++|++++ ++.|++||+.+++.....
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECC
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEec
Confidence 678999999999999886 999999998872 34556666555544 7788877 458999999988776654
Q ss_pred CCC
Q psy12376 78 GKH 80 (89)
Q Consensus 78 ~~h 80 (89)
..+
T Consensus 189 ~~~ 191 (741)
T 2ecf_A 189 ADG 191 (741)
T ss_dssp CCC
T ss_pred cCC
Confidence 433
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.60 E-value=1.4e-06 Score=55.83 Aligned_cols=74 Identities=9% Similarity=0.148 Sum_probs=54.7
Q ss_pred CcEEEEEEccCCCEEEEEeC-CCcEEEEeCCCCeEeeEecCCcc-eee-c---c-EEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 5 YYIFLLQTSQVGQVLAIGTA-RGNLTVYNHMTSKRVPVLGKHTN-TIV-G---Q-VLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~-~g~v~iwd~~~~~~~~~~~~h~~-~i~-~---~-~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
..+..++|+|+|++++++.. ++.|.+||..+++.+..+..... .+. . + ++++...++.|.+||..+++....+
T Consensus 231 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 231 HFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp CCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 34778999999997766665 58999999999887766653222 221 1 4 5666668999999999988877655
Q ss_pred C
Q psy12376 78 G 78 (89)
Q Consensus 78 ~ 78 (89)
.
T Consensus 311 ~ 311 (353)
T 3vgz_A 311 D 311 (353)
T ss_dssp E
T ss_pred e
Confidence 3
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.60 E-value=3.7e-07 Score=63.03 Aligned_cols=70 Identities=13% Similarity=-0.016 Sum_probs=56.3
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCC--cEEEEeCCCCeEeeEecCCccee------------ec---cEEEEEeCCCCEEE
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARG--NLTVYNHMTSKRVPVLGKHTNTI------------VG---QVLAIGTARGNLTV 65 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g--~v~iwd~~~~~~~~~~~~h~~~i------------~~---~~las~s~d~~v~i 65 (89)
+...+..++|||||++|+++..+| .|.+||..+++.. .+.+|...+ .+ .++++++.|+.++|
T Consensus 193 ~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l 271 (582)
T 3o4h_A 193 GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAV 271 (582)
T ss_dssp SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEE
T ss_pred CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEE
Confidence 445689999999999999888888 8999999988776 666665422 22 68999999999999
Q ss_pred EeCCCCEEEe
Q psy12376 66 YNHMTSKRVP 75 (89)
Q Consensus 66 wd~~~~~~~~ 75 (89)
|++ ++...
T Consensus 272 ~~~--g~~~~ 279 (582)
T 3o4h_A 272 FID--GERVE 279 (582)
T ss_dssp EET--TEEEC
T ss_pred EEE--CCeec
Confidence 999 66543
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.59 E-value=2e-08 Score=70.51 Aligned_cols=67 Identities=6% Similarity=-0.022 Sum_probs=52.9
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc---eeec-------cEEEEEeCC---------CCEEEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN---TIVG-------QVLAIGTAR---------GNLTVY 66 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~---~i~~-------~~las~s~d---------~~v~iw 66 (89)
...+++|||||+++++ +.||.|.+||..+++....+..|.. .+.+ ++|++++.+ +.+++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 3678899999997776 7899999999999887777766653 1332 788888775 678899
Q ss_pred eCCCCEE
Q psy12376 67 NHMTSKR 73 (89)
Q Consensus 67 d~~~~~~ 73 (89)
|+.+++.
T Consensus 97 d~~~~~~ 103 (723)
T 1xfd_A 97 KIPHGDP 103 (723)
T ss_dssp ESSSCCC
T ss_pred ECCCCce
Confidence 9988765
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.57 E-value=1.7e-07 Score=65.74 Aligned_cols=73 Identities=11% Similarity=0.031 Sum_probs=54.1
Q ss_pred cEEEEEEccCCCEEEEEeCC---------CcEEEEeCCCCeEeeEec---CCcceeec-------cEEEEEeCCCCEEEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTAR---------GNLTVYNHMTSKRVPVLG---KHTNTIVG-------QVLAIGTARGNLTVY 66 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~---------g~v~iwd~~~~~~~~~~~---~h~~~i~~-------~~las~s~d~~v~iw 66 (89)
.+.+++|||||++||+++.+ +.+.+||+.+++. ..+. +|...+.+ ++||+++. +.|++|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEE
Confidence 37899999999999999874 7888999998865 3333 34333332 68888876 789999
Q ss_pred eCCCCEEEeeeCCC
Q psy12376 67 NHMTSKRVPVLGKH 80 (89)
Q Consensus 67 d~~~~~~~~~l~~h 80 (89)
|+.+++.......+
T Consensus 140 ~~~~g~~~~~~~~~ 153 (723)
T 1xfd_A 140 AHVGKQAIRVVSTG 153 (723)
T ss_dssp SSSSSCCEEEECCC
T ss_pred ECCCCceEEEecCC
Confidence 99887766555443
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.54 E-value=1.3e-06 Score=55.84 Aligned_cols=71 Identities=10% Similarity=0.065 Sum_probs=52.3
Q ss_pred EEEEccCCCEEEEEeC-CCcEEEEeCCCCeE-eeEecCCcceee---c----cEEEEEeCCC---CEEEEeCCCCEEEee
Q psy12376 9 LLQTSQVGQVLAIGTA-RGNLTVYNHMTSKR-VPVLGKHTNTIV---G----QVLAIGTARG---NLTVYNHMTSKRVPV 76 (89)
Q Consensus 9 ~~~~spdg~~la~g~~-~g~v~iwd~~~~~~-~~~~~~h~~~i~---~----~~las~s~d~---~v~iwd~~~~~~~~~ 76 (89)
+++|+|||+++++++. ++.|.+||..+++. ...+..+..+.. . ++++++..++ .|.+||+.+++....
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE
Confidence 8999999997666655 88999999998876 555555444433 1 6777554443 899999998887776
Q ss_pred eCC
Q psy12376 77 LGK 79 (89)
Q Consensus 77 l~~ 79 (89)
+..
T Consensus 124 ~~~ 126 (331)
T 3u4y_A 124 IPI 126 (331)
T ss_dssp EEC
T ss_pred EEC
Confidence 543
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.52 E-value=8.5e-07 Score=56.31 Aligned_cols=72 Identities=18% Similarity=0.096 Sum_probs=53.5
Q ss_pred cEEEEEEccCCCEEEEEe------------CCCcEEEEeCCCCeEeeEecCCcc--eee-c---cEEEEEeCCCCEEEEe
Q psy12376 6 YIFLLQTSQVGQVLAIGT------------ARGNLTVYNHMTSKRVPVLGKHTN--TIV-G---QVLAIGTARGNLTVYN 67 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~------------~~g~v~iwd~~~~~~~~~~~~h~~--~i~-~---~~las~s~d~~v~iwd 67 (89)
.+..++|+|||++|+++. .++.|.+||..+++.+..+..... .+. . ++|+++ ++.|.+||
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d 160 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMD 160 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEE
Confidence 456799999999998886 579999999999887766643221 111 1 566666 68899999
Q ss_pred CCCCEEEeeeCC
Q psy12376 68 HMTSKRVPVLGK 79 (89)
Q Consensus 68 ~~~~~~~~~l~~ 79 (89)
+.+++....+..
T Consensus 161 ~~~~~~~~~~~~ 172 (337)
T 1pby_B 161 PEAGTLVEDKPI 172 (337)
T ss_dssp TTTTEEEEEECS
T ss_pred CCCCcEeeeeec
Confidence 999887766543
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.51 E-value=4.1e-07 Score=57.89 Aligned_cols=66 Identities=14% Similarity=0.015 Sum_probs=45.4
Q ss_pred CCcEEEEEEccCCCEEEEEeCC-CcEEEEeCC--CCe--EeeEecCCcce--eec----cEE-EEEeCCCCEEEEeCC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTAR-GNLTVYNHM--TSK--RVPVLGKHTNT--IVG----QVL-AIGTARGNLTVYNHM 69 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~-g~v~iwd~~--~~~--~~~~~~~h~~~--i~~----~~l-as~s~d~~v~iwd~~ 69 (89)
...+.+++|+|+|++|++++.+ +.|.+|++. +++ .+..+..+..+ +.. ++| +++..++.|.+||+.
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 3457789999999988888876 899999987 554 23344333221 111 555 444558899999994
No 150
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.48 E-value=7.1e-07 Score=60.38 Aligned_cols=69 Identities=10% Similarity=0.137 Sum_probs=51.9
Q ss_pred cCCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 3 LRYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 3 ~~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
++. |+.++| |+.+|+++ .+|.|++||+++.........|...+.+ ..+|.++.||.|.+||+.++....
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc
Confidence 455 899999 99999998 7899999998765443344445454444 458888999999999998766543
No 151
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.48 E-value=3.3e-07 Score=65.29 Aligned_cols=75 Identities=13% Similarity=0.143 Sum_probs=56.3
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcce-----e---e-c---cEEEEEeCC---------CCEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNT-----I---V-G---QVLAIGTAR---------GNLT 64 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~-----i---~-~---~~las~s~d---------~~v~ 64 (89)
...+++|+|||++++++ ||.|.+||..+++....+.+|... . . + ++|+.++.+ +.++
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45689999999999886 899999999999877777766532 1 1 2 788888876 5667
Q ss_pred EEeCCCCEEEeeeCCCCCC
Q psy12376 65 VYNHMTSKRVPVLGKHTKS 83 (89)
Q Consensus 65 iwd~~~~~~~~~l~~h~~~ 83 (89)
+||+.+++... +..|...
T Consensus 96 ~~d~~~~~~~~-l~~~~~~ 113 (740)
T 4a5s_A 96 IYDLNKRQLIT-EERIPNN 113 (740)
T ss_dssp EEETTTTEECC-SSCCCTT
T ss_pred EEECCCCcEEE-cccCCCc
Confidence 99999888654 4444443
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.46 E-value=2.2e-06 Score=55.25 Aligned_cols=70 Identities=13% Similarity=0.143 Sum_probs=47.1
Q ss_pred cEEEEEEccCCCEE-EEEeCCCcEEEEeCCC-C--eEeeEecCCcceeec-------cEEEEEeC-CCCEEEE--eCCCC
Q psy12376 6 YIFLLQTSQVGQVL-AIGTARGNLTVYNHMT-S--KRVPVLGKHTNTIVG-------QVLAIGTA-RGNLTVY--NHMTS 71 (89)
Q Consensus 6 ~i~~~~~spdg~~l-a~g~~~g~v~iwd~~~-~--~~~~~~~~h~~~i~~-------~~las~s~-d~~v~iw--d~~~~ 71 (89)
.+..++|+|||++| ++...++.|.+|++.. + +.+..+..+...+.. ++|++++. ++.|.+| |.+++
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg 320 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSG 320 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCC
Confidence 47889999999987 5566789999999862 2 344444444332222 66666654 5899999 55566
Q ss_pred EEEe
Q psy12376 72 KRVP 75 (89)
Q Consensus 72 ~~~~ 75 (89)
+...
T Consensus 321 ~l~~ 324 (347)
T 3hfq_A 321 KLSL 324 (347)
T ss_dssp CEEE
T ss_pred eEEe
Confidence 6543
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.45 E-value=1e-06 Score=56.26 Aligned_cols=71 Identities=8% Similarity=-0.046 Sum_probs=53.9
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCc--ce--eec----c-EEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 8 FLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHT--NT--IVG----Q-VLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~--~~--i~~----~-~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
+.+++++++.++++++.++.|.+||..+++.+..+..+. .+ +.. + ++++.+.++.|.+||+.+++....+.
T Consensus 3 ~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp -CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 356788999999999999999999999998877765433 21 111 4 55677789999999999888776553
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.45 E-value=9.8e-07 Score=64.99 Aligned_cols=77 Identities=12% Similarity=0.123 Sum_probs=61.7
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEE-EEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLT-VYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~-iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.+..++|+ ||+.|+.++.++.+. +||..+++.. .+.+|...+.+ ++|++++.++.|++||+.+++....+
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec
Confidence 68899999 999999999888888 9999877643 34466555443 78999999999999999998887777
Q ss_pred CCCCCCC
Q psy12376 78 GKHTKSK 84 (89)
Q Consensus 78 ~~h~~~~ 84 (89)
..|...+
T Consensus 417 ~~~~~~v 423 (1045)
T 1k32_A 417 RSREAMI 423 (1045)
T ss_dssp ECSSSCC
T ss_pred cCCCCCc
Confidence 6666553
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.42 E-value=4.1e-07 Score=64.06 Aligned_cols=68 Identities=12% Similarity=0.014 Sum_probs=49.9
Q ss_pred EEEEEEccCCCEEEEEeC---------CCcEEEEeCCCCeEe--eEecCCc-ceeec---cEEEEEeCCCCEEEEeCCCC
Q psy12376 7 IFLLQTSQVGQVLAIGTA---------RGNLTVYNHMTSKRV--PVLGKHT-NTIVG---QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~---------~g~v~iwd~~~~~~~--~~~~~h~-~~i~~---~~las~s~d~~v~iwd~~~~ 71 (89)
+.+++|||||++||.++. ++.|.+||+.+++.+ ..+.... ....+ ++||+++ |+.|++||+.++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g 140 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD 140 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCC
Confidence 778999999999998876 789999999998762 2232111 11112 6788875 789999999877
Q ss_pred EEEe
Q psy12376 72 KRVP 75 (89)
Q Consensus 72 ~~~~ 75 (89)
+...
T Consensus 141 ~~~~ 144 (719)
T 1z68_A 141 PPFQ 144 (719)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 6544
No 156
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.40 E-value=4.8e-06 Score=52.92 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=45.3
Q ss_pred cEEEEEEccCCCEEEEE-eCCCcEEEEeCC--CC--eEeeEecCCcceeec-------cEEEEEe-CCCCEEEEeC--CC
Q psy12376 6 YIFLLQTSQVGQVLAIG-TARGNLTVYNHM--TS--KRVPVLGKHTNTIVG-------QVLAIGT-ARGNLTVYNH--MT 70 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g-~~~g~v~iwd~~--~~--~~~~~~~~h~~~i~~-------~~las~s-~d~~v~iwd~--~~ 70 (89)
.+..++|+|||++|+++ ..++.|.+||.. ++ +.+..+..+.. +.+ ++|++++ .|+.|.+|++ ++
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQ 310 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTT
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCC
Confidence 46689999999988754 478999999997 33 33444443333 222 5666665 6899999954 46
Q ss_pred CEE
Q psy12376 71 SKR 73 (89)
Q Consensus 71 ~~~ 73 (89)
++.
T Consensus 311 g~~ 313 (343)
T 1ri6_A 311 GLL 313 (343)
T ss_dssp TEE
T ss_pred cee
Confidence 643
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.39 E-value=1.7e-06 Score=60.78 Aligned_cols=65 Identities=17% Similarity=0.148 Sum_probs=50.4
Q ss_pred EEEEEEccCCCEEEEEe---------------------------------CCCcEEEEeCCCCeEeeEec--CCcceeec
Q psy12376 7 IFLLQTSQVGQVLAIGT---------------------------------ARGNLTVYNHMTSKRVPVLG--KHTNTIVG 51 (89)
Q Consensus 7 i~~~~~spdg~~la~g~---------------------------------~~g~v~iwd~~~~~~~~~~~--~h~~~i~~ 51 (89)
+.+++|||||++||.++ .+..|.+||+.+++...... .|...+.+
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 47899999999999987 45689999999887654432 35444443
Q ss_pred -------cEEEEEeCCC-----CEEEEeCCCC
Q psy12376 52 -------QVLAIGTARG-----NLTVYNHMTS 71 (89)
Q Consensus 52 -------~~las~s~d~-----~v~iwd~~~~ 71 (89)
++|++++.|+ .|++||+.++
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 6788877775 8999999988
No 158
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.34 E-value=4.4e-06 Score=53.29 Aligned_cols=69 Identities=9% Similarity=0.163 Sum_probs=49.8
Q ss_pred CcEEEEEEccCCCEEEE-EeCCCcEEEEeCCCCeE---eeEecCCcce--eec----cE-EEEEeCCCCEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAI-GTARGNLTVYNHMTSKR---VPVLGKHTNT--IVG----QV-LAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~-g~~~g~v~iwd~~~~~~---~~~~~~h~~~--i~~----~~-las~s~d~~v~iwd~~~~~~ 73 (89)
.....++|+|||+++++ +..++.|.+||..+++. +..+..+..+ +.. ++ +++...++.|.+||+.+++.
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 34789999999996654 45688999999998887 6666543222 111 54 45555688899999998877
No 159
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.33 E-value=8.5e-06 Score=53.79 Aligned_cols=67 Identities=13% Similarity=0.180 Sum_probs=51.7
Q ss_pred EEEccCCCEEEEEeC-----------CCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCC-
Q psy12376 10 LQTSQVGQVLAIGTA-----------RGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTS- 71 (89)
Q Consensus 10 ~~~spdg~~la~g~~-----------~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~- 71 (89)
++|+||+..+.+... ++.|.+||..+++.+..+..+. +... ++|+++.. ++|.+||..++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~ 336 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPE 336 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCc
Confidence 789999887766543 3489999999999988887655 2111 67777766 99999999999
Q ss_pred -EEEeeeC
Q psy12376 72 -KRVPVLG 78 (89)
Q Consensus 72 -~~~~~l~ 78 (89)
+.+..+.
T Consensus 337 l~~~~~i~ 344 (361)
T 2oiz_A 337 PKLLRTIE 344 (361)
T ss_dssp CEEEEEET
T ss_pred ceeeEEec
Confidence 8887753
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.31 E-value=4.5e-06 Score=58.59 Aligned_cols=79 Identities=16% Similarity=0.129 Sum_probs=55.3
Q ss_pred CCcEEEEEEccCCCEEEEEeCCC-----cEEEEeCCCCeEeeEec--CCcc--------ee-e--c-cEEEEEeCCCCEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARG-----NLTVYNHMTSKRVPVLG--KHTN--------TI-V--G-QVLAIGTARGNLT 64 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g-----~v~iwd~~~~~~~~~~~--~h~~--------~i-~--~-~~las~s~d~~v~ 64 (89)
...+..++|||||++|++++.+. .|.+||..+++....+. .+.. .. . . +++++++.|+.++
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~ 336 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNH 336 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCE
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccE
Confidence 34588999999999999887765 99999999983333221 1111 11 1 2 6889999999999
Q ss_pred EEeCC-CCEEEeeeCCCCC
Q psy12376 65 VYNHM-TSKRVPVLGKHTK 82 (89)
Q Consensus 65 iwd~~-~~~~~~~l~~h~~ 82 (89)
||++. ++.....+..|..
T Consensus 337 l~~~~~~~~~~~~l~~~~~ 355 (706)
T 2z3z_A 337 LYLYDTTGRLIRQVTKGEW 355 (706)
T ss_dssp EEEEETTSCEEEECCCSSS
T ss_pred EEEEECCCCEEEecCCCCe
Confidence 99885 5665566655543
No 161
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.30 E-value=1.7e-06 Score=60.29 Aligned_cols=77 Identities=9% Similarity=-0.129 Sum_probs=53.7
Q ss_pred CCcEEEEEEccCCCEEEEEeCC----------CcEEEEeCCC------CeEeeEec-CCcceeec-------cEEEEEeC
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTAR----------GNLTVYNHMT------SKRVPVLG-KHTNTIVG-------QVLAIGTA 59 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~----------g~v~iwd~~~------~~~~~~~~-~h~~~i~~-------~~las~s~ 59 (89)
...+..++|||||+.|+.++.+ ..|.+||..+ ++. ..+. .+...+.. ++|+.++.
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred CccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEEC
Confidence 3457899999999999988876 5899999987 543 4444 44343332 77887775
Q ss_pred C--------CCEEEEeCC-CC---EEEeeeCCCC
Q psy12376 60 R--------GNLTVYNHM-TS---KRVPVLGKHT 81 (89)
Q Consensus 60 d--------~~v~iwd~~-~~---~~~~~l~~h~ 81 (89)
+ ..|++||+. ++ +.......|.
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~ 241 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE 241 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT
T ss_pred CCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC
Confidence 5 379999998 56 4444444443
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.27 E-value=4.6e-06 Score=58.14 Aligned_cols=75 Identities=13% Similarity=0.104 Sum_probs=51.1
Q ss_pred CcEEEEEEccCCCEEEEEeCC--------CcEEEEeCC-CC---eEeeEecCCcceeec-------cEEEEEeCCC--CE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTAR--------GNLTVYNHM-TS---KRVPVLGKHTNTIVG-------QVLAIGTARG--NL 63 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~--------g~v~iwd~~-~~---~~~~~~~~h~~~i~~-------~~las~s~d~--~v 63 (89)
+.+..++|||||++||..+.+ ..|.+||+. +| +......+|...+.. +++++++.|+ .|
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l 267 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNL 267 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEE
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEE
Confidence 456788999999999987754 379999998 56 433333334343332 6788888888 67
Q ss_pred EEEeCCCCEEEeeeCC
Q psy12376 64 TVYNHMTSKRVPVLGK 79 (89)
Q Consensus 64 ~iwd~~~~~~~~~l~~ 79 (89)
++||+.+++.......
T Consensus 268 ~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 268 HRVDPATGAATQLCRR 283 (662)
T ss_dssp EEECTTTCCEEESSCC
T ss_pred EEEECCCCceeecccc
Confidence 7777767766554443
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.25 E-value=1e-06 Score=62.00 Aligned_cols=64 Identities=16% Similarity=0.197 Sum_probs=49.0
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc---eeec-------cEEEEEeC---------CCCEEEEeCC
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN---TIVG-------QVLAIGTA---------RGNLTVYNHM 69 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~---~i~~-------~~las~s~---------d~~v~iwd~~ 69 (89)
.++|+|||+++++ +.|+.|.+||..+++....+..|.. .+.+ ++|++++. |+.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6899999965554 5699999999999887666654432 1222 78888876 7899999999
Q ss_pred CCEE
Q psy12376 70 TSKR 73 (89)
Q Consensus 70 ~~~~ 73 (89)
+++.
T Consensus 99 ~g~~ 102 (719)
T 1z68_A 99 NGEF 102 (719)
T ss_dssp TTEE
T ss_pred CCcc
Confidence 8877
No 164
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.20 E-value=7.3e-06 Score=58.02 Aligned_cols=67 Identities=10% Similarity=-0.046 Sum_probs=48.7
Q ss_pred cEEEEEEccCCCEEEE-----EeCCCcEEEEeCCCCeEe-e-EecCC--cceeec---cEEEEEeCCCC-----------
Q psy12376 6 YIFLLQTSQVGQVLAI-----GTARGNLTVYNHMTSKRV-P-VLGKH--TNTIVG---QVLAIGTARGN----------- 62 (89)
Q Consensus 6 ~i~~~~~spdg~~la~-----g~~~g~v~iwd~~~~~~~-~-~~~~h--~~~i~~---~~las~s~d~~----------- 62 (89)
.+..++|||||++||. |+.+..|++||+.+|+.+ . .+... .....+ +.|+.++.|..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~ 201 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGY 201 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCC
Confidence 5889999999999983 444568999999998765 2 12222 122222 78888888876
Q ss_pred --EEEEeCCCCE
Q psy12376 63 --LTVYNHMTSK 72 (89)
Q Consensus 63 --v~iwd~~~~~ 72 (89)
|++|++.+++
T Consensus 202 ~~v~~~~l~t~~ 213 (695)
T 2bkl_A 202 TTIRYHTLGTEP 213 (695)
T ss_dssp CEEEEEETTSCG
T ss_pred CEEEEEECCCCc
Confidence 9999998765
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.19 E-value=4.5e-06 Score=54.22 Aligned_cols=72 Identities=14% Similarity=0.071 Sum_probs=50.9
Q ss_pred EEEEEEccCCCEEEEEeCC---CcEEEEeCCCCeEeeEecCCcc----eeec---cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 7 IFLLQTSQVGQVLAIGTAR---GNLTVYNHMTSKRVPVLGKHTN----TIVG---QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~---g~v~iwd~~~~~~~~~~~~h~~----~i~~---~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
+..++|||||++||..... ..|.+||..+++......++.. ...+ ++|+.++.++.|++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 5667899999998877553 3788889988875443332222 1122 7898999999999999988765554
Q ss_pred eC
Q psy12376 77 LG 78 (89)
Q Consensus 77 l~ 78 (89)
..
T Consensus 118 ~~ 119 (396)
T 3c5m_A 118 YT 119 (396)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 166
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.19 E-value=2.8e-05 Score=49.78 Aligned_cols=70 Identities=13% Similarity=0.088 Sum_probs=51.5
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCC----CCEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTAR----GNLTVYNHMTSKR 73 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d----~~v~iwd~~~~~~ 73 (89)
..+.+++|+|+|+.++++..++.|.+||..+++.......+...+.+ +++++...+ +.|.+||.+++..
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL 124 (333)
T ss_dssp CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred ccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEE
Confidence 34689999999998888888999999999887755443233333433 566766666 6899999987655
Q ss_pred E
Q psy12376 74 V 74 (89)
Q Consensus 74 ~ 74 (89)
.
T Consensus 125 ~ 125 (333)
T 2dg1_A 125 Q 125 (333)
T ss_dssp E
T ss_pred E
Confidence 4
No 167
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.17 E-value=2.8e-05 Score=50.41 Aligned_cols=64 Identities=8% Similarity=0.048 Sum_probs=43.6
Q ss_pred cEEEEEEccCCCEEEEEe-CCCcEEEEeCCCCeE--eeEecC---Ccc---eeec----cEEEEEeC--CCCEEEEeCC
Q psy12376 6 YIFLLQTSQVGQVLAIGT-ARGNLTVYNHMTSKR--VPVLGK---HTN---TIVG----QVLAIGTA--RGNLTVYNHM 69 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~-~~g~v~iwd~~~~~~--~~~~~~---h~~---~i~~----~~las~s~--d~~v~iwd~~ 69 (89)
.+..++|+|||++++++. .++.|.+|+..+++. +..+.. +.. .+.. ++|+.+.. ++.|.+|++.
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 467899999999887777 689999999987754 222222 111 1211 66655444 5899999995
No 168
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.14 E-value=3.5e-05 Score=49.92 Aligned_cols=70 Identities=9% Similarity=0.037 Sum_probs=45.5
Q ss_pred cEEEEEEccCCCEEEEEeCC--CcEEEEeCC--CCe--EeeEecCCcceeec-------cEEEEEe-CCCCEEEEe--CC
Q psy12376 6 YIFLLQTSQVGQVLAIGTAR--GNLTVYNHM--TSK--RVPVLGKHTNTIVG-------QVLAIGT-ARGNLTVYN--HM 69 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~--g~v~iwd~~--~~~--~~~~~~~h~~~i~~-------~~las~s-~d~~v~iwd--~~ 69 (89)
....++|||||++|+++..+ +.|.+|++. +++ .+..+.. ...+.+ ++|++++ .++.|.+|+ .+
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQA 338 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTT
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECC
Confidence 35799999999988766654 899999985 454 3333332 111211 6666665 778999964 45
Q ss_pred CCEEEee
Q psy12376 70 TSKRVPV 76 (89)
Q Consensus 70 ~~~~~~~ 76 (89)
+++....
T Consensus 339 ~g~~~~~ 345 (361)
T 3scy_A 339 TGLLTDI 345 (361)
T ss_dssp TCCEEEC
T ss_pred CCcEeec
Confidence 6666543
No 169
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.14 E-value=1.8e-05 Score=51.01 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=47.1
Q ss_pred CcEEEEEEccCCCEEEEEe-CCCcEEEEeCC-CCe--EeeEecCC-cc--------eeec-------cEEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGT-ARGNLTVYNHM-TSK--RVPVLGKH-TN--------TIVG-------QVLAIGTARGNLT 64 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~-~~g~v~iwd~~-~~~--~~~~~~~h-~~--------~i~~-------~~las~s~d~~v~ 64 (89)
..+..++|+|||++|++++ .++.+.+|++. +++ .+..+... .. .+.+ +++++...++.|.
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~ 165 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVY 165 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEE
Confidence 3567899999999888887 68899999985 333 22222211 01 1221 6777777889999
Q ss_pred EEeCC-CCEE
Q psy12376 65 VYNHM-TSKR 73 (89)
Q Consensus 65 iwd~~-~~~~ 73 (89)
+||+. +++.
T Consensus 166 ~~~~~~~g~~ 175 (347)
T 3hfq_A 166 VYNVSDAGQL 175 (347)
T ss_dssp EEEECTTSCE
T ss_pred EEEECCCCcE
Confidence 99997 5543
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.13 E-value=4.6e-06 Score=59.43 Aligned_cols=66 Identities=12% Similarity=0.016 Sum_probs=49.8
Q ss_pred EEEEEccCCCEEEEEeCC---------CcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 8 FLLQTSQVGQVLAIGTAR---------GNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~---------g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
..++|||||++||.++.+ +.+.+||+.+++.. .+..|...+.. +.||.+ .|+.|++||+.++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCC
Confidence 348999999999999876 66789999998754 45555554443 778887 4689999999876
Q ss_pred EEEe
Q psy12376 72 KRVP 75 (89)
Q Consensus 72 ~~~~ 75 (89)
....
T Consensus 143 ~~~~ 146 (740)
T 4a5s_A 143 PSYR 146 (740)
T ss_dssp CCEE
T ss_pred ceEE
Confidence 6443
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.09 E-value=3.2e-05 Score=48.97 Aligned_cols=69 Identities=6% Similarity=-0.043 Sum_probs=52.2
Q ss_pred cEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 6 YIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 6 ~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
...+++|+|+|+ .++++..++.|.+||..++ ...+..+...+.+ +++++...++.|.+||..+++....
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESI 105 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEE
Confidence 367899999998 7888888999999999877 4455444443333 6777777778999999977765544
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.08 E-value=1.7e-05 Score=56.27 Aligned_cols=67 Identities=12% Similarity=0.017 Sum_probs=49.4
Q ss_pred cEEEEEEccCCCEEEEEeCCC-----cEEEEeCCCCeEeeEecCC---cceeec---cEEEEEeCCCC------------
Q psy12376 6 YIFLLQTSQVGQVLAIGTARG-----NLTVYNHMTSKRVPVLGKH---TNTIVG---QVLAIGTARGN------------ 62 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g-----~v~iwd~~~~~~~~~~~~h---~~~i~~---~~las~s~d~~------------ 62 (89)
.+..++|||||++||.+..++ .|++||+.+|+.......+ .....+ +.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 478899999999999776644 8999999999876532211 122222 67888888776
Q ss_pred ----EEEEeCCCCE
Q psy12376 63 ----LTVYNHMTSK 72 (89)
Q Consensus 63 ----v~iwd~~~~~ 72 (89)
|++|++.+++
T Consensus 206 ~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQ 219 (710)
T ss_dssp CCCEEEEEETTSCG
T ss_pred CCCEEEEEECCCCc
Confidence 9999998765
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.08 E-value=2.9e-05 Score=49.85 Aligned_cols=65 Identities=15% Similarity=0.128 Sum_probs=45.3
Q ss_pred EEEEEEccCCCEEEEEeCC---C--cEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeC---------------
Q psy12376 7 IFLLQTSQVGQVLAIGTAR---G--NLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTA--------------- 59 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~---g--~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~--------------- 59 (89)
+..++|||||++||..+.+ + .|.+||..+++.......+. +.. +.|+.++.
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 5679999999999887654 3 48888888877544433222 332 56666653
Q ss_pred ------------CCCEEEEeCCCCEE
Q psy12376 60 ------------RGNLTVYNHMTSKR 73 (89)
Q Consensus 60 ------------d~~v~iwd~~~~~~ 73 (89)
...|++||+.+++.
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp CC---------CEEEEEEEETTTTEE
T ss_pred eeecCcccccCccceEEEEECCCCeE
Confidence 25799999988876
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.01 E-value=4.6e-05 Score=49.52 Aligned_cols=69 Identities=14% Similarity=-0.059 Sum_probs=49.2
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceee------c---cEEEE----------------------
Q psy12376 8 FLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIV------G---QVLAI---------------------- 56 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~------~---~~las---------------------- 56 (89)
..+.|||||+.|+.+..++.+.+||+.+++....+..+...+. . .+++.
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 3pe7_A 84 FGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYF 163 (388)
T ss_dssp SSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGG
T ss_pred cceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhc
Confidence 3568999999999999999999999999876555544433221 1 34442
Q ss_pred EeCCCCEEEEeCCCCEEEee
Q psy12376 57 GTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 57 ~s~d~~v~iwd~~~~~~~~~ 76 (89)
.+.+..|++||+.+++....
T Consensus 164 ~~~~~~l~~~d~~~g~~~~l 183 (388)
T 3pe7_A 164 TKPCCRLMRVDLKTGESTVI 183 (388)
T ss_dssp GCCCEEEEEEETTTCCEEEE
T ss_pred cCCcceEEEEECCCCceEEe
Confidence 22457899999988765544
No 175
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.96 E-value=1.6e-05 Score=52.65 Aligned_cols=61 Identities=15% Similarity=0.174 Sum_probs=44.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
++..+++++.||.|+.||..+|+.+..+.. +.+.+ ..+++++.|+.|+.||.++|+.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee
Confidence 578999999999999999999998877765 33322 47777789999999999887765444
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.95 E-value=0.00014 Score=47.05 Aligned_cols=67 Identities=7% Similarity=-0.008 Sum_probs=51.6
Q ss_pred CcEEEEEEccCCCEEEEEeCC------------------------CcEEEEeCCCCeEeeEecC-Ccceeec-------c
Q psy12376 5 YYIFLLQTSQVGQVLAIGTAR------------------------GNLTVYNHMTSKRVPVLGK-HTNTIVG-------Q 52 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~------------------------g~v~iwd~~~~~~~~~~~~-h~~~i~~-------~ 52 (89)
..+.+++++|+|+.+++...+ +.|.+||..+++.+..+.. +-..... +
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 458999999999999988877 5799999988887766642 2122211 7
Q ss_pred EEEEEeCCCCEEEEeCCCC
Q psy12376 53 VLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 53 ~las~s~d~~v~iwd~~~~ 71 (89)
++++.+.++.|++||....
T Consensus 104 l~v~d~~~~~v~~~~~~g~ 122 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSK 122 (329)
T ss_dssp EEEEETTTTEEEEECTTCS
T ss_pred EEEEECCCCEEEEEeCCCC
Confidence 8888888999999998644
No 177
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.95 E-value=5.6e-05 Score=49.83 Aligned_cols=68 Identities=10% Similarity=0.063 Sum_probs=49.9
Q ss_pred EEEEccCCCEEEEEeC----------CCcEEEEeCCCCeEeeEecCC---------cceeec----cEEEEEeC--CCCE
Q psy12376 9 LLQTSQVGQVLAIGTA----------RGNLTVYNHMTSKRVPVLGKH---------TNTIVG----QVLAIGTA--RGNL 63 (89)
Q Consensus 9 ~~~~spdg~~la~g~~----------~g~v~iwd~~~~~~~~~~~~h---------~~~i~~----~~las~s~--d~~v 63 (89)
.++|||||++++++.. ++.|.+||..+++.+..+... ...+.. ++|..+.. +++|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 7999999999988762 567999999988877665421 111111 66666643 6899
Q ss_pred EEEeCCCCEEEee
Q psy12376 64 TVYNHMTSKRVPV 76 (89)
Q Consensus 64 ~iwd~~~~~~~~~ 76 (89)
.+||+.+++.+..
T Consensus 134 ~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 134 GIVDVAKGDYVED 146 (361)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEECCCCcEEEE
Confidence 9999999888766
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.93 E-value=6.6e-05 Score=48.01 Aligned_cols=71 Identities=8% Similarity=0.013 Sum_probs=55.9
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCccee----ec--cEEEEEeCCCCEEEEeCCCCEEEeeeCC
Q psy12376 8 FLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTI----VG--QVLAIGTARGNLTVYNHMTSKRVPVLGK 79 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i----~~--~~las~s~d~~v~iwd~~~~~~~~~l~~ 79 (89)
..+++.++|+++++...++.|..||.. |+.+..+.....+. .. +++++++.++.|..+|..+|+.+..+..
T Consensus 128 ~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~ 204 (276)
T 3no2_A 128 RQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA 204 (276)
T ss_dssp SCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEG
T ss_pred cCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecC
Confidence 345788999999999999999999998 89888876532221 11 7888888888899999998888777653
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.90 E-value=6.9e-05 Score=48.54 Aligned_cols=68 Identities=10% Similarity=-0.143 Sum_probs=47.8
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-cEEEEE------------------------------e
Q psy12376 10 LQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-QVLAIG------------------------------T 58 (89)
Q Consensus 10 ~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-~~las~------------------------------s 58 (89)
+.|||||++|+..+.++.|.+||..+++.......+...... +.|+.. .
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~ 165 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTN 165 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTC
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCC
Confidence 789999999999999999999999888765554434333222 333321 3
Q ss_pred CCCCEEEEeCCCCEEEeee
Q psy12376 59 ARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 59 ~d~~v~iwd~~~~~~~~~l 77 (89)
.+..|++||+.+++.....
T Consensus 166 ~~~~l~~~d~~~g~~~~~~ 184 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIH 184 (396)
T ss_dssp CCEEEEEEETTTCCEEEEE
T ss_pred CcceEEEEECCCCcEEeec
Confidence 5568999999877655443
No 180
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.87 E-value=8.1e-05 Score=48.66 Aligned_cols=67 Identities=12% Similarity=0.111 Sum_probs=45.1
Q ss_pred cEEEEE-EccCCCEEEEEeCCC------cEEEEeCC-CCeEee---EecCCcc-----ee-e---c-cEEEEEeC-CCCE
Q psy12376 6 YIFLLQ-TSQVGQVLAIGTARG------NLTVYNHM-TSKRVP---VLGKHTN-----TI-V---G-QVLAIGTA-RGNL 63 (89)
Q Consensus 6 ~i~~~~-~spdg~~la~g~~~g------~v~iwd~~-~~~~~~---~~~~h~~-----~i-~---~-~~las~s~-d~~v 63 (89)
.+..++ |||||++|+++..+. .|.+|++. +|+... ....+.. .+ . . ++|++++. ++.|
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEE
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeE
Confidence 478899 999999887765432 89999985 566432 1222211 11 2 3 67888776 4899
Q ss_pred EEEeCCCCE
Q psy12376 64 TVYNHMTSK 72 (89)
Q Consensus 64 ~iwd~~~~~ 72 (89)
.+|+++...
T Consensus 335 ~v~~~~~~~ 343 (365)
T 1jof_A 335 EIYRWKDEF 343 (365)
T ss_dssp EEEEEETTE
T ss_pred EEEEEchhh
Confidence 999997653
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.85 E-value=0.00017 Score=45.17 Aligned_cols=64 Identities=16% Similarity=0.284 Sum_probs=46.2
Q ss_pred CcEEEEEEccCCCEEEEEeCCC-cEEEEeCCCCeEeeEecCCcc--eeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARG-NLTVYNHMTSKRVPVLGKHTN--TIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g-~v~iwd~~~~~~~~~~~~h~~--~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
..+..++++|+|+.+++...++ .|.+||. +++.+..+..+.. .+.+ +++++ +.|+.|++|+...
T Consensus 207 ~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp CSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred CCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 3578999999999888888776 9999996 4566666544322 1111 55555 6799999999854
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.83 E-value=0.00028 Score=49.67 Aligned_cols=72 Identities=10% Similarity=0.072 Sum_probs=54.3
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCC--CCeEeeEecCCcc----eee-----c-c-EEEEEeCCCCEEEEeCCCCE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHM--TSKRVPVLGKHTN----TIV-----G-Q-VLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~--~~~~~~~~~~h~~----~i~-----~-~-~las~s~d~~v~iwd~~~~~ 72 (89)
.+..+.|||||+++++++.++.|.+||.. +++.+..+..... .+. . + .+++...+++|.|+|..+.+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 46689999999999999999999999995 7777666643222 233 3 3 45556677999999998887
Q ss_pred EEeee
Q psy12376 73 RVPVL 77 (89)
Q Consensus 73 ~~~~l 77 (89)
.+..+
T Consensus 278 ~~~~i 282 (567)
T 1qks_A 278 PKKIQ 282 (567)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.82 E-value=0.0004 Score=43.83 Aligned_cols=72 Identities=10% Similarity=-0.053 Sum_probs=47.8
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCC-CCeE---eeEecCCcc---eeec----cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHM-TSKR---VPVLGKHTN---TIVG----QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~-~~~~---~~~~~~h~~---~i~~----~~las~s~d~~v~iwd~~~~~~~ 74 (89)
....++|+|||+.|++.+.++.|.+|+.. +|+. ...+..+.. .+.. +++++. ++.|.+||.. ++..
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDEL 249 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEE
Confidence 46789999999988888888999999986 4544 233322222 1211 555554 7889999986 5555
Q ss_pred eeeCCC
Q psy12376 75 PVLGKH 80 (89)
Q Consensus 75 ~~l~~h 80 (89)
..+..+
T Consensus 250 ~~~~~~ 255 (296)
T 3e5z_A 250 GRVLTP 255 (296)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 555443
No 184
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.81 E-value=7.7e-05 Score=48.77 Aligned_cols=68 Identities=10% Similarity=-0.000 Sum_probs=46.6
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCC-CCeEeeEec--CCcce--eec----c--EEEEEe-------------CCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHM-TSKRVPVLG--KHTNT--IVG----Q--VLAIGT-------------ARG 61 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~-~~~~~~~~~--~h~~~--i~~----~--~las~s-------------~d~ 61 (89)
.+..++|+|||++|++++.+ .|.+|++. +|+...... .+..+ +.. + ++++++ .++
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 46789999999999888887 99999987 777543322 11111 111 4 355553 689
Q ss_pred CEEEEeCC-CCEEE
Q psy12376 62 NLTVYNHM-TSKRV 74 (89)
Q Consensus 62 ~v~iwd~~-~~~~~ 74 (89)
++.+|++. +++..
T Consensus 120 ~v~v~~~~~~g~~~ 133 (365)
T 1jof_A 120 YGNVFSVSETGKLE 133 (365)
T ss_dssp EEEEEEECTTCCEE
T ss_pred eEEEEccCCCCcCc
Confidence 99999996 45543
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.78 E-value=0.001 Score=42.92 Aligned_cols=72 Identities=11% Similarity=0.058 Sum_probs=52.9
Q ss_pred EEEEEEccC-CCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec-------------cEEEEEeCCCCEEEEeCCC
Q psy12376 7 IFLLQTSQV-GQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG-------------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 7 i~~~~~spd-g~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~-------------~~las~s~d~~v~iwd~~~ 70 (89)
...++++|+ |..+++...++.|.+||..+|+.+..+.. +...+.+ +.+++.+.+..|++||..+
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC
Confidence 789999999 77888888899999999988888777642 3222221 2233334455899999998
Q ss_pred CEEEeeeC
Q psy12376 71 SKRVPVLG 78 (89)
Q Consensus 71 ~~~~~~l~ 78 (89)
++.+..++
T Consensus 278 g~~~~~~~ 285 (329)
T 3fvz_A 278 GEIIDVFK 285 (329)
T ss_dssp CCEEEEEC
T ss_pred CeEEEEEc
Confidence 88888764
No 186
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.74 E-value=0.00016 Score=51.77 Aligned_cols=54 Identities=17% Similarity=0.212 Sum_probs=42.5
Q ss_pred CCcEEEEeCCCCeEeeEecCCc----ceeec--cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 25 RGNLTVYNHMTSKRVPVLGKHT----NTIVG--QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 25 ~g~v~iwd~~~~~~~~~~~~h~----~~i~~--~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
+|.|..||..+|+.+..+..+. +.+.. .+++.|+.|+.|+.||.++|+.+..+.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeee
Confidence 3789999999999887765332 22222 789999999999999999999886654
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.74 E-value=0.00046 Score=43.22 Aligned_cols=71 Identities=14% Similarity=0.247 Sum_probs=50.5
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCc--ceeec-------cEEEEEeCCC-CEEEEeCCCCEEEe
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHT--NTIVG-------QVLAIGTARG-NLTVYNHMTSKRVP 75 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~--~~i~~-------~~las~s~d~-~v~iwd~~~~~~~~ 75 (89)
.+..++++|+|+.+++...++.|.+||.. ++.+..+..+. ..+.. +++++...++ .|.+||.. ++.+.
T Consensus 165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~ 242 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLIS 242 (286)
T ss_dssp SEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEE
T ss_pred CcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEE
Confidence 47899999999988888889999999974 55666664331 22221 6777777775 99999975 44444
Q ss_pred eeC
Q psy12376 76 VLG 78 (89)
Q Consensus 76 ~l~ 78 (89)
.+.
T Consensus 243 ~~~ 245 (286)
T 1q7f_A 243 ALE 245 (286)
T ss_dssp EEE
T ss_pred EEc
Confidence 443
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.65 E-value=0.00099 Score=43.13 Aligned_cols=73 Identities=11% Similarity=-0.080 Sum_probs=51.2
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCc------c--eee-c--cEEEEEe-CCCCEEEEeCCCCE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHT------N--TIV-G--QVLAIGT-ARGNLTVYNHMTSK 72 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~------~--~i~-~--~~las~s-~d~~v~iwd~~~~~ 72 (89)
.....++++|+|+.+++...++.|.+||..+++....+.... . .+. . .++++.. .++.|.++|..+++
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDK 163 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTE
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCe
Confidence 347889999999554554489999999999998776554222 1 121 2 4455544 48899999999888
Q ss_pred EEeee
Q psy12376 73 RVPVL 77 (89)
Q Consensus 73 ~~~~l 77 (89)
....+
T Consensus 164 ~~~~i 168 (328)
T 3dsm_A 164 VVDEL 168 (328)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77655
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.64 E-value=0.00017 Score=51.15 Aligned_cols=64 Identities=8% Similarity=-0.018 Sum_probs=44.3
Q ss_pred EEEEEEccCCCEEEEEeCCCc----------------EEEEeCCCCeE--eeEec--CCcceeec-------cEEEEEeC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGN----------------LTVYNHMTSKR--VPVLG--KHTNTIVG-------QVLAIGTA 59 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~----------------v~iwd~~~~~~--~~~~~--~h~~~i~~-------~~las~s~ 59 (89)
+..++|||||+.|+.++.++. |.+|++.+++. ...+. .|...+.. ++|+.++.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 456899999999999988766 99999987652 12222 23332221 66666654
Q ss_pred -----CCCEEEEeCCC
Q psy12376 60 -----RGNLTVYNHMT 70 (89)
Q Consensus 60 -----d~~v~iwd~~~ 70 (89)
+..|++||+.+
T Consensus 253 ~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CSSSSCCEEEEEEGGG
T ss_pred ccCCCccEEEEEECcc
Confidence 67899999975
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.63 E-value=0.00051 Score=43.84 Aligned_cols=72 Identities=8% Similarity=-0.074 Sum_probs=54.4
Q ss_pred cEEEEEEccCCCEEEEEeC-CCcEEEEeCCCCeEeeEecC------Ccce---e--ec--cEEEEEeCCCCEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTA-RGNLTVYNHMTSKRVPVLGK------HTNT---I--VG--QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~-~g~v~iwd~~~~~~~~~~~~------h~~~---i--~~--~~las~s~d~~v~iwd~~~~ 71 (89)
.+.++++.|||+++++.+. ++.+..+|. +|+.+..+.. +... + .. +++++.+.++.|.+||.+ |
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 5788999999999999887 888888886 6777665531 1111 1 11 899999999999999998 8
Q ss_pred EEEeeeCC
Q psy12376 72 KRVPVLGK 79 (89)
Q Consensus 72 ~~~~~l~~ 79 (89)
+.+..+..
T Consensus 156 ~~~w~~~~ 163 (276)
T 3no2_A 156 QLLNSVKL 163 (276)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 87776654
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.60 E-value=0.0011 Score=47.27 Aligned_cols=76 Identities=14% Similarity=0.057 Sum_probs=49.0
Q ss_pred cEEEEEEccCCCEEEEEeCCC-----cEEEEeCCCC--eEeeEecCCcceee----c--cEEEEEeCC----CCEEEEeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARG-----NLTVYNHMTS--KRVPVLGKHTNTIV----G--QVLAIGTAR----GNLTVYNH 68 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g-----~v~iwd~~~~--~~~~~~~~h~~~i~----~--~~las~s~d----~~v~iwd~ 68 (89)
.+..+.|||||++|+..+.++ .|.+||..++ +....+..+..... . +.|+..+.+ +.|.+||+
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 478999999999998887554 8999998776 31344444332211 1 556666554 34999999
Q ss_pred CCC--EEEeeeCCCC
Q psy12376 69 MTS--KRVPVLGKHT 81 (89)
Q Consensus 69 ~~~--~~~~~l~~h~ 81 (89)
.++ .....+..+.
T Consensus 349 ~~~~~~~~~l~~~~~ 363 (741)
T 1yr2_A 349 SGSTPRFDTVVPESK 363 (741)
T ss_dssp SSSSCEEEEEECCCS
T ss_pred CCCccccEEEecCCC
Confidence 774 4444444443
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.55 E-value=0.00033 Score=49.61 Aligned_cols=66 Identities=9% Similarity=-0.099 Sum_probs=45.1
Q ss_pred EEEEEccCCCEEEEEeCCCc-------------EEEEeCCCCe----EeeEecCCcceeec-------cEEEEEeCCC--
Q psy12376 8 FLLQTSQVGQVLAIGTARGN-------------LTVYNHMTSK----RVPVLGKHTNTIVG-------QVLAIGTARG-- 61 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~-------------v~iwd~~~~~----~~~~~~~h~~~i~~-------~~las~s~d~-- 61 (89)
..++|+|||+.|+.++.+.. |++|++.++. .+.....|...+.. ++|+.++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 67899999999999988776 9999998765 23233334333322 6676666555
Q ss_pred --CEEEEeCCCCEE
Q psy12376 62 --NLTVYNHMTSKR 73 (89)
Q Consensus 62 --~v~iwd~~~~~~ 73 (89)
.|++||..+++.
T Consensus 251 ~~~l~~~~~~~~~~ 264 (695)
T 2bkl_A 251 ENDVYWKRPGEKDF 264 (695)
T ss_dssp EEEEEEECTTCSSC
T ss_pred ceEEEEEcCCCCce
Confidence 777887655543
No 193
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.50 E-value=0.00057 Score=48.85 Aligned_cols=53 Identities=23% Similarity=0.300 Sum_probs=41.6
Q ss_pred CcEEEEeCCCCeEeeEecCC----cceeec--cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 26 GNLTVYNHMTSKRVPVLGKH----TNTIVG--QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 26 g~v~iwd~~~~~~~~~~~~h----~~~i~~--~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
|.|..||..+|+.+..+... ...+.. .+++.++.|+.+++||.++++.+..+.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeee
Confidence 78999999999987766422 223332 788889999999999999999887664
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.50 E-value=0.00058 Score=46.19 Aligned_cols=69 Identities=10% Similarity=-0.002 Sum_probs=49.2
Q ss_pred EEEEccCCCEEEEEe----------CCCcEEEEeCCCCeEeeEecC----------Ccceee--c--cEEEEEe--CCCC
Q psy12376 9 LLQTSQVGQVLAIGT----------ARGNLTVYNHMTSKRVPVLGK----------HTNTIV--G--QVLAIGT--ARGN 62 (89)
Q Consensus 9 ~~~~spdg~~la~g~----------~~g~v~iwd~~~~~~~~~~~~----------h~~~i~--~--~~las~s--~d~~ 62 (89)
.+++||||+++..+. .++.|.+||..+++.+..+.- +...+. . +++..+. .++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 499999999886665 367899999999988776531 111122 1 5555443 3789
Q ss_pred EEEEeCCCCEEEeee
Q psy12376 63 LTVYNHMTSKRVPVL 77 (89)
Q Consensus 63 v~iwd~~~~~~~~~l 77 (89)
|.++|+.+++.+..+
T Consensus 162 VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 162 VGVVDLEGKAFKRML 176 (386)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEECCCCcEEEEE
Confidence 999999999887765
No 195
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.47 E-value=0.0028 Score=41.21 Aligned_cols=77 Identities=13% Similarity=0.095 Sum_probs=53.7
Q ss_pred CcEEEEEEccCCCEEEEEeC-----CCcEEEEeCCCCeEeeEecCC------c---c--eeec---cEEEEEe---CCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTA-----RGNLTVYNHMTSKRVPVLGKH------T---N--TIVG---QVLAIGT---ARGN 62 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~-----~g~v~iwd~~~~~~~~~~~~h------~---~--~i~~---~~las~s---~d~~ 62 (89)
..+..++++|+|+.+++... ++.|.+||..+++.+..+.-. . . .+.. ..+++-+ .++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 45889999999987776554 579999999998866655321 1 1 1111 3445555 6889
Q ss_pred EEEEeCCCCEEEeeeCCCC
Q psy12376 63 LTVYNHMTSKRVPVLGKHT 81 (89)
Q Consensus 63 v~iwd~~~~~~~~~l~~h~ 81 (89)
|.+||+.+++....+.+|.
T Consensus 147 i~v~d~~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYP 165 (343)
T ss_dssp EEEEETTTCCEEEECTTCT
T ss_pred EEEEECCCCCEEEEecCCC
Confidence 9999998888777776653
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.43 E-value=0.0033 Score=41.82 Aligned_cols=70 Identities=9% Similarity=0.004 Sum_probs=50.4
Q ss_pred EEEEEEccCCCEEEEEeC----------CCcEEEEeCCCCeEeeEecCCc--ceeec----c-EEEEEe-CCCCEEEEeC
Q psy12376 7 IFLLQTSQVGQVLAIGTA----------RGNLTVYNHMTSKRVPVLGKHT--NTIVG----Q-VLAIGT-ARGNLTVYNH 68 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~----------~g~v~iwd~~~~~~~~~~~~h~--~~i~~----~-~las~s-~d~~v~iwd~ 68 (89)
...++++||++.+.+... ++.|.++|..+++.+..+.... ..+.- + +++++. .++.|.++|.
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 344788999887766543 3589999999999877764321 12211 5 666666 5899999999
Q ss_pred CCCEEEee
Q psy12376 69 MTSKRVPV 76 (89)
Q Consensus 69 ~~~~~~~~ 76 (89)
.+++.+..
T Consensus 349 ~t~~vv~~ 356 (373)
T 2mad_H 349 GAGDQDQS 356 (373)
T ss_pred CCCCEEee
Confidence 99888876
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.40 E-value=0.00078 Score=48.07 Aligned_cols=67 Identities=10% Similarity=-0.065 Sum_probs=46.4
Q ss_pred cEEEEEEccCCCEEEEEeCC-----CcEEEEeCCCCeEeeEec-CC--cceeec--cEEEEEeCCCC-------------
Q psy12376 6 YIFLLQTSQVGQVLAIGTAR-----GNLTVYNHMTSKRVPVLG-KH--TNTIVG--QVLAIGTARGN------------- 62 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~-----g~v~iwd~~~~~~~~~~~-~h--~~~i~~--~~las~s~d~~------------- 62 (89)
.+..++|||||++||.+..+ ..|++||+.+|+.+.... .. .....+ +.|+.++.|..
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCCC
Confidence 47789999999999887654 359999999988654311 11 122222 56777776654
Q ss_pred -EEEEeCCCCE
Q psy12376 63 -LTVYNHMTSK 72 (89)
Q Consensus 63 -v~iwd~~~~~ 72 (89)
|++|++.++.
T Consensus 244 ~v~~~~lgt~~ 254 (741)
T 1yr2_A 244 TVWLHRLGTPQ 254 (741)
T ss_dssp EEEEEETTSCG
T ss_pred EEEEEECCCCc
Confidence 8999997654
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.40 E-value=0.0018 Score=40.71 Aligned_cols=66 Identities=3% Similarity=-0.053 Sum_probs=47.9
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------c-EEEEEeCCCCEEEEeCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------Q-VLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~-~las~s~d~~v~iwd~~~ 70 (89)
..+..++++++|..+++...++.|.+||..+++.+..+..+...+.+ + ++++...++.|..|++..
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 34678999999998888888899999999877665555544333332 4 555666677888888864
No 199
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.36 E-value=0.0024 Score=40.57 Aligned_cols=74 Identities=15% Similarity=0.095 Sum_probs=49.0
Q ss_pred EEEEEEccCCCEE-EEEeCCCcEEEEeC--CCCeE-----eeEecCCcce---eec----cEEEEEeCCCCEEEEeCCCC
Q psy12376 7 IFLLQTSQVGQVL-AIGTARGNLTVYNH--MTSKR-----VPVLGKHTNT---IVG----QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 7 i~~~~~spdg~~l-a~g~~~g~v~iwd~--~~~~~-----~~~~~~h~~~---i~~----~~las~s~d~~v~iwd~~~~ 71 (89)
...++|+|||+.| ++.+.++.|.+|+. .+|+. +..+..+... +.. ++.++...++.|..||.+++
T Consensus 151 pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 151 SNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred ccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 5689999999866 55666889999986 45543 1222222121 111 67777777888999999878
Q ss_pred EEEeeeCCC
Q psy12376 72 KRVPVLGKH 80 (89)
Q Consensus 72 ~~~~~l~~h 80 (89)
+....+..+
T Consensus 231 ~~~~~i~~p 239 (297)
T 3g4e_A 231 KRLQTVKLP 239 (297)
T ss_dssp CEEEEEECS
T ss_pred eEEEEEECC
Confidence 777665443
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.30 E-value=0.0034 Score=41.75 Aligned_cols=66 Identities=12% Similarity=0.023 Sum_probs=47.8
Q ss_pred EEEEEEccCCCEEEEEeC--CCcEEEEeCCCCeEeeE-ecCCcce-eec---cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 7 IFLLQTSQVGQVLAIGTA--RGNLTVYNHMTSKRVPV-LGKHTNT-IVG---QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~--~g~v~iwd~~~~~~~~~-~~~h~~~-i~~---~~las~s~d~~v~iwd~~~~~~~ 74 (89)
...++|||||++|+.+.. ++.|.++| .+++.+.. +...... +.. ..+++.+.|+.+.++|. +++..
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~ 199 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA 199 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEE
Confidence 457899999999988764 57899999 99988777 5422111 111 45666778999999999 66554
No 201
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.29 E-value=0.0023 Score=42.86 Aligned_cols=69 Identities=9% Similarity=0.076 Sum_probs=50.1
Q ss_pred EEEccCCCEEEEEeC---------CCcEEEEeCCCCeEeeEecCCcc--eee--c---cEEEEEe-CCCCEEEEeCCCCE
Q psy12376 10 LQTSQVGQVLAIGTA---------RGNLTVYNHMTSKRVPVLGKHTN--TIV--G---QVLAIGT-ARGNLTVYNHMTSK 72 (89)
Q Consensus 10 ~~~spdg~~la~g~~---------~g~v~iwd~~~~~~~~~~~~h~~--~i~--~---~~las~s-~d~~v~iwd~~~~~ 72 (89)
++++|||+.+..+.. ++.+.++|..+++.+..+..... .|. . .++++.. .+++|.++|+.+++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 789999987776543 23566999999988776643221 121 1 3677777 69999999999999
Q ss_pred EEeeeC
Q psy12376 73 RVPVLG 78 (89)
Q Consensus 73 ~~~~l~ 78 (89)
.+..+.
T Consensus 349 vv~~I~ 354 (368)
T 1mda_H 349 DQSSVE 354 (368)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 988774
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.25 E-value=0.0011 Score=40.84 Aligned_cols=67 Identities=7% Similarity=0.026 Sum_probs=45.4
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~ 71 (89)
..+.+++++++|..+++...++.|.+|+..+.........+...+.+ +++++...++.|++++....
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 34789999999988888778899999998764432221122122221 67777778888888887543
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.23 E-value=0.0041 Score=42.05 Aligned_cols=63 Identities=13% Similarity=0.141 Sum_probs=47.4
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~ 73 (89)
..+..+.+.+. .+|+.+.||.+.+||..++.... +...|.| +-++.|..||++++|+...++.
T Consensus 127 ~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 127 KPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp SCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEETTSCEEEEEEETTEE
T ss_pred cceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEcCCcEEEEcCCCccc
Confidence 34667776654 38888999999999998776543 2344555 4478899999999999987774
No 204
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.22 E-value=0.0073 Score=38.39 Aligned_cols=69 Identities=6% Similarity=-0.038 Sum_probs=44.4
Q ss_pred CcEEEEEEccCCCEEEEEeCC----CcEEEEeCCCCeEeeEec--CCcceeec-------cEEEEEeC------CCCEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTAR----GNLTVYNHMTSKRVPVLG--KHTNTIVG-------QVLAIGTA------RGNLTV 65 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~----g~v~iwd~~~~~~~~~~~--~h~~~i~~-------~~las~s~------d~~v~i 65 (89)
..+.+++|+|+|+.+++...+ +.|.+||..+++....+. .+...+.+ +++++... ++.|..
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~ 166 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYY 166 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEE
Confidence 458999999999988887766 689999988776443332 12223322 45555543 355666
Q ss_pred EeCCCCEE
Q psy12376 66 YNHMTSKR 73 (89)
Q Consensus 66 wd~~~~~~ 73 (89)
+|..+++.
T Consensus 167 ~~~~~~~~ 174 (333)
T 2dg1_A 167 VSPDFRTV 174 (333)
T ss_dssp ECTTSCCE
T ss_pred EeCCCCEE
Confidence 77655443
No 205
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.20 E-value=0.00018 Score=47.64 Aligned_cols=68 Identities=10% Similarity=0.046 Sum_probs=43.3
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 10 LQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 10 ~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
..++|++..+++++.++.|..||.++|+.+..+.. ...++.+ ..++.++.|+.|+.||.++|+.....
T Consensus 124 ~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 124 DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEE
T ss_pred ccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEe
Confidence 34567888889999999999999999887655431 1122211 45777889999999999988876544
No 206
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.18 E-value=0.0092 Score=38.41 Aligned_cols=71 Identities=8% Similarity=-0.020 Sum_probs=51.7
Q ss_pred EEEEEEccCCCEEEEEeC--CCcEEEEeCCCCeEeeEec--CCcc--eeec---cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 7 IFLLQTSQVGQVLAIGTA--RGNLTVYNHMTSKRVPVLG--KHTN--TIVG---QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~--~g~v~iwd~~~~~~~~~~~--~h~~--~i~~---~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
...++|+|||..+++.+. ++.|.++|..+++.+..+. .+.. .+.- .+.++...++.+.++|..+.+.+..+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 578999999754444332 5799999999999887754 2211 1211 66777788999999999998887766
No 207
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.17 E-value=0.0091 Score=38.56 Aligned_cols=71 Identities=11% Similarity=-0.044 Sum_probs=49.3
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcce--ee--c--cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNT--IV--G--QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~--i~--~--~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
....+.+. +++.+++...++.|.+||..+++.+..+.....+ +. . +++++...++.|.+||..+++....+
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 45677774 3455566666899999999999987777532222 11 1 45555558999999999998876544
No 208
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.15 E-value=0.0035 Score=44.00 Aligned_cols=54 Identities=15% Similarity=0.121 Sum_probs=41.0
Q ss_pred CCcEEEEeCCCCeEeeEecC----Ccceee-c-cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 25 RGNLTVYNHMTSKRVPVLGK----HTNTIV-G-QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 25 ~g~v~iwd~~~~~~~~~~~~----h~~~i~-~-~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
+|.|..||..+|+.+..+.. ...++. . .+++.++.|+.|+.+|.++++.+..+.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 57999999999998776542 122322 2 677779999999999999999887653
No 209
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.14 E-value=0.0065 Score=39.54 Aligned_cols=63 Identities=13% Similarity=0.074 Sum_probs=42.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEecCC-----cceeec-cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVLGKH-----TNTIVG-QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h-----~~~i~~-~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
++..+.+++.+|.+..+|..+|+.+...... ..++.. ..|..++.++.|+++|.++++.....
T Consensus 276 ~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 276 DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 3556777777888888888888776655421 112222 67777888888888888887766544
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.13 E-value=0.0073 Score=40.85 Aligned_cols=66 Identities=12% Similarity=0.058 Sum_probs=49.5
Q ss_pred EEEEEccCCCEEEEEeC--CCcEEEEeCCCCeEeeEecCCc-ceeec---cEEEEEeCCCCEEEEeCCC-CEE
Q psy12376 8 FLLQTSQVGQVLAIGTA--RGNLTVYNHMTSKRVPVLGKHT-NTIVG---QVLAIGTARGNLTVYNHMT-SKR 73 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~--~g~v~iwd~~~~~~~~~~~~h~-~~i~~---~~las~s~d~~v~iwd~~~-~~~ 73 (89)
..++|+|||+++.++.. ++.|.++|..+++.+..+.... ..+.. ..+++.+.||.+.+.++.+ ++.
T Consensus 140 ~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 140 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred ceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 45899999999887763 6899999999999888774321 11111 5667788899999999975 554
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.12 E-value=0.0016 Score=46.25 Aligned_cols=67 Identities=12% Similarity=0.075 Sum_probs=45.4
Q ss_pred cEEEEEEccCCCEEEEEe-----CCCcEEEEeCCCCeEeeE-ecCC--cceee-c-cEEEEEeCCCC-------------
Q psy12376 6 YIFLLQTSQVGQVLAIGT-----ARGNLTVYNHMTSKRVPV-LGKH--TNTIV-G-QVLAIGTARGN------------- 62 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~-----~~g~v~iwd~~~~~~~~~-~~~h--~~~i~-~-~~las~s~d~~------------- 62 (89)
.+..++|||||++||.+. ....|++||+.+|+.+.. +... ..... . +.|+.++.|..
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWLGNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEETTTEEEEEESSCCC-------CCCCE
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEeCCCEEEEEEecCcccccccccCCCcE
Confidence 578899999999998543 335799999999886542 2111 11111 3 66777777743
Q ss_pred EEEEeCCCCE
Q psy12376 63 LTVYNHMTSK 72 (89)
Q Consensus 63 v~iwd~~~~~ 72 (89)
|++|++.++.
T Consensus 210 v~~~~lgt~~ 219 (693)
T 3iuj_A 210 VYFHRLGTAQ 219 (693)
T ss_dssp EEEEETTSCG
T ss_pred EEEEECCCCc
Confidence 9999997654
No 212
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.04 E-value=0.0041 Score=38.27 Aligned_cols=68 Identities=9% Similarity=0.004 Sum_probs=46.9
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
.+.+++++|+|+.+++...++.|.+||..++........+...+.+ .++++...++.|.+||......
T Consensus 151 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 151 DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp SCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred CceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 4678999999998888777889999998776543322222121211 5667777788999999865443
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.01 E-value=0.016 Score=37.32 Aligned_cols=70 Identities=11% Similarity=-0.024 Sum_probs=44.0
Q ss_pred EEEEEEccCCCEEEEE-eCCCcEEEEeCC--CC-e-----EeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCC
Q psy12376 7 IFLLQTSQVGQVLAIG-TARGNLTVYNHM--TS-K-----RVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 7 i~~~~~spdg~~la~g-~~~g~v~iwd~~--~~-~-----~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~ 70 (89)
...++|+|||+.|+.+ +.++.|.+|+.. +| + .+..+......... ++.++...++.|.+||. +
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~ 259 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D 259 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-C
Confidence 5689999999876544 557899999975 55 3 12222222222211 56666666788999998 4
Q ss_pred CEEEeee
Q psy12376 71 SKRVPVL 77 (89)
Q Consensus 71 ~~~~~~l 77 (89)
++....+
T Consensus 260 g~~~~~i 266 (326)
T 2ghs_A 260 GNHIARY 266 (326)
T ss_dssp CCEEEEE
T ss_pred CCEEEEE
Confidence 5554444
No 214
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.97 E-value=0.0056 Score=41.85 Aligned_cols=69 Identities=12% Similarity=0.066 Sum_probs=49.7
Q ss_pred EEEEccCCCEEEEEe----------CCCcEEEEeCCCCeEeeEec-C-----------Ccceeec--cEEEEEeC--CCC
Q psy12376 9 LLQTSQVGQVLAIGT----------ARGNLTVYNHMTSKRVPVLG-K-----------HTNTIVG--QVLAIGTA--RGN 62 (89)
Q Consensus 9 ~~~~spdg~~la~g~----------~~g~v~iwd~~~~~~~~~~~-~-----------h~~~i~~--~~las~s~--d~~ 62 (89)
.+++||||++|.++. .++.|.++|..+++.+..+. + |.-.+.. +++..+.. +++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999887765 46789999999998876653 1 1112222 55555543 678
Q ss_pred EEEEeCCCCEEEeee
Q psy12376 63 LTVYNHMTSKRVPVL 77 (89)
Q Consensus 63 v~iwd~~~~~~~~~l 77 (89)
|.+.|+.+++.+..+
T Consensus 202 VsVID~~t~kvv~~I 216 (426)
T 3c75_H 202 VGVVDLEGKTFDRML 216 (426)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEECCCCeEEEEE
Confidence 999999998877654
No 215
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.94 E-value=0.0044 Score=43.64 Aligned_cols=54 Identities=17% Similarity=0.279 Sum_probs=41.5
Q ss_pred CCcEEEEeCCCCeEeeEecCC----cceee-c-cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 25 RGNLTVYNHMTSKRVPVLGKH----TNTIV-G-QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 25 ~g~v~iwd~~~~~~~~~~~~h----~~~i~-~-~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
+|.|..||..+|+.+...... ...+. . .+++.++.|+.++.||.++|+.+..+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 688999999999987665321 22322 2 788889999999999999999887653
No 216
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.92 E-value=0.013 Score=37.76 Aligned_cols=71 Identities=11% Similarity=0.065 Sum_probs=51.4
Q ss_pred EEEEEEccCCCEEEEEeCCC--cEEEEeCCCCeEeeEecCCcc----eeec---cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 7 IFLLQTSQVGQVLAIGTARG--NLTVYNHMTSKRVPVLGKHTN----TIVG---QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g--~v~iwd~~~~~~~~~~~~h~~----~i~~---~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
...+.|+ ++..+.+.+.+| .|+++|..+|+.+..+.-... .+.. .+.+....++.+.+||.++.+.+..+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 4689998 666666666665 999999999998776643221 1222 66666778999999999988877665
Q ss_pred C
Q psy12376 78 G 78 (89)
Q Consensus 78 ~ 78 (89)
.
T Consensus 124 ~ 124 (262)
T 3nol_A 124 N 124 (262)
T ss_dssp E
T ss_pred E
Confidence 3
No 217
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.88 E-value=0.016 Score=37.61 Aligned_cols=63 Identities=13% Similarity=0.112 Sum_probs=45.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEeeEecCC---------cceeec------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 15 VGQVLAIGTARGNLTVYNHMTSKRVPVLGKH---------TNTIVG------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 15 dg~~la~g~~~g~v~iwd~~~~~~~~~~~~h---------~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
++..+.+++.++.|..+|..+|+.+...... ...+.+ ..+..++.++.|..+|.++|+.....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 3567778888899999999999887655431 122222 67777888999999999888776543
No 218
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.88 E-value=0.011 Score=37.63 Aligned_cols=73 Identities=14% Similarity=0.107 Sum_probs=48.1
Q ss_pred CCcEEE-EEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCE-EEEeCCCCEEEee
Q psy12376 4 RYYIFL-LQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNL-TVYNHMTSKRVPV 76 (89)
Q Consensus 4 ~~~i~~-~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v-~iwd~~~~~~~~~ 76 (89)
...+.. +.|+ || .+++++.++.+.|| ..+++..... .+...+.+ .++++++.++.. .||.+. ++. ..
T Consensus 262 ~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~-g~~-~~ 335 (347)
T 2gop_A 262 DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA-KGRHWIMGFDVDEIVVYLKETATRLRELFTWD-GEE-KQ 335 (347)
T ss_dssp CSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE-CSSSEEEEEEESSSEEEEEECSSSCCEEEEES-SSE-EE
T ss_pred CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe-cCCCeEEeeeeeCcEEEEEcCCCChHHheEeC-CcE-EE
Confidence 345775 9999 99 88999999999999 7766543333 34444443 467777777665 777776 543 33
Q ss_pred eCCCCC
Q psy12376 77 LGKHTK 82 (89)
Q Consensus 77 l~~h~~ 82 (89)
+-.|..
T Consensus 336 lt~~n~ 341 (347)
T 2gop_A 336 LTDYND 341 (347)
T ss_dssp CCCTTS
T ss_pred eccccH
Confidence 445444
No 219
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.77 E-value=0.0095 Score=41.92 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=46.9
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc---eeec---cEEEEEeCCCCEEEEeCC--CCEEEeee
Q psy12376 14 QVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN---TIVG---QVLAIGTARGNLTVYNHM--TSKRVPVL 77 (89)
Q Consensus 14 pdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~---~i~~---~~las~s~d~~v~iwd~~--~~~~~~~l 77 (89)
|.+.++++...++.|.++|..+++.+..+..... ...+ +++.+++.|+.|.+||+. +++.+..+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE
Confidence 4445777888899999999999988877653222 1112 788888999999999995 66665544
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.75 E-value=0.012 Score=39.49 Aligned_cols=67 Identities=15% Similarity=0.073 Sum_probs=47.4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcce-ee-c---cEEEEEeCCC--CEEEEeCCCCE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNT-IV-G---QVLAIGTARG--NLTVYNHMTSK 72 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~-i~-~---~~las~s~d~--~v~iwd~~~~~ 72 (89)
....++|+|+|+.+++...++.|++||..+++..........+ +. . +.|+.+..++ .|.+|+...+.
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 4789999999998888888899999999887765444332111 11 1 5677777665 78888876543
No 221
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.68 E-value=0.01 Score=42.31 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=41.5
Q ss_pred CCcEEEEeCCCCeEeeEecCC----cceee-c-cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 25 RGNLTVYNHMTSKRVPVLGKH----TNTIV-G-QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 25 ~g~v~iwd~~~~~~~~~~~~h----~~~i~-~-~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
+|.|..||..+|+.+.....+ ...+. . .+++.++.|+.|++||.++++.+..+.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEec
Confidence 488999999999987665422 12222 2 788999999999999999998876653
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.62 E-value=0.0074 Score=41.24 Aligned_cols=68 Identities=13% Similarity=0.159 Sum_probs=49.4
Q ss_pred EEEccCCCEEEEEeC----------CCcEEEEeCCCCeEeeEecCC--ccee--ec--c-EEEEEe-CCCCEEEEeCCCC
Q psy12376 10 LQTSQVGQVLAIGTA----------RGNLTVYNHMTSKRVPVLGKH--TNTI--VG--Q-VLAIGT-ARGNLTVYNHMTS 71 (89)
Q Consensus 10 ~~~spdg~~la~g~~----------~g~v~iwd~~~~~~~~~~~~h--~~~i--~~--~-~las~s-~d~~v~iwd~~~~ 71 (89)
++++|||+.+.+... ++.|.++|..+++.+..+... ...| .. + +++++. .++.|.++|..++
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 789999887666532 357999999999988776421 1122 21 5 666665 6999999999999
Q ss_pred EEEeee
Q psy12376 72 KRVPVL 77 (89)
Q Consensus 72 ~~~~~l 77 (89)
+.+..+
T Consensus 404 kvv~tI 409 (426)
T 3c75_H 404 EELRSV 409 (426)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 988775
No 223
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.60 E-value=0.011 Score=42.24 Aligned_cols=67 Identities=19% Similarity=0.195 Sum_probs=52.9
Q ss_pred EEEEccCCCEEEEEeCCCc-------------------EEEEeCCCCeEeeEecC--Cc-------c-eeec--------
Q psy12376 9 LLQTSQVGQVLAIGTARGN-------------------LTVYNHMTSKRVPVLGK--HT-------N-TIVG-------- 51 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~-------------------v~iwd~~~~~~~~~~~~--h~-------~-~i~~-------- 51 (89)
.++++|++..+..++.++. |..+|.++|+.+..++. |. . .+..
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5788998899999988864 99999999999887653 32 1 1221
Q ss_pred -cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 52 -QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 52 -~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+.++.++.+|.++++|.++|+.+.
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~ 343 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLS 343 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEE
T ss_pred EEEEEEECCCCeEEEEECCCCCEec
Confidence 378899999999999999998763
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.59 E-value=0.019 Score=40.78 Aligned_cols=67 Identities=9% Similarity=0.065 Sum_probs=42.9
Q ss_pred cEEEEEEccCCCEEEEEeC----CCcEEEEeCCCCe-EeeEecCCcce----eec---cEEEEEeCC---CCEEEEeCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTA----RGNLTVYNHMTSK-RVPVLGKHTNT----IVG---QVLAIGTAR---GNLTVYNHMT 70 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~----~g~v~iwd~~~~~-~~~~~~~h~~~----i~~---~~las~s~d---~~v~iwd~~~ 70 (89)
....+.|||||++|+.... +..|.++|..++. ....+..+... +.. .+++....| +.|..+|+.+
T Consensus 235 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~ 314 (693)
T 3iuj_A 235 RYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAAN 314 (693)
T ss_dssp SEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred EEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 4678999999998876543 2489999987653 23444443332 221 455555444 5799999976
Q ss_pred CE
Q psy12376 71 SK 72 (89)
Q Consensus 71 ~~ 72 (89)
+.
T Consensus 315 ~~ 316 (693)
T 3iuj_A 315 PG 316 (693)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 225
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.59 E-value=0.052 Score=33.45 Aligned_cols=68 Identities=12% Similarity=0.047 Sum_probs=45.4
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEee-EecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVP-VLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~-~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
..+.+++++++|..+++...++.|..||.. ++... .+......+.+ .++++...++.|..||. +++..
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 358899999999988887778899999986 43321 11112222222 56666667888999998 55443
No 226
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.57 E-value=0.013 Score=36.74 Aligned_cols=71 Identities=11% Similarity=0.029 Sum_probs=45.8
Q ss_pred EEEEEEc----cCCCEEEEE-eCCCcEEEEeCC-CCeE-----eeEecCCc-ceeec-------cEEEEEeCCCCEEEEe
Q psy12376 7 IFLLQTS----QVGQVLAIG-TARGNLTVYNHM-TSKR-----VPVLGKHT-NTIVG-------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 7 i~~~~~s----pdg~~la~g-~~~g~v~iwd~~-~~~~-----~~~~~~h~-~~i~~-------~~las~s~d~~v~iwd 67 (89)
...++|+ |+|+.|..+ ..++.|.+||.. +++. ...+..+. ..... +++++...++.|.+||
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG 253 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence 5688999 999765444 567899999975 4542 22333332 22221 6777777888999999
Q ss_pred CCCCEEEeee
Q psy12376 68 HMTSKRVPVL 77 (89)
Q Consensus 68 ~~~~~~~~~l 77 (89)
.++++....+
T Consensus 254 ~~~g~~~~~~ 263 (314)
T 1pjx_A 254 PDGGQPKMRI 263 (314)
T ss_dssp TTCBSCSEEE
T ss_pred CCCCcEeEEE
Confidence 9755544433
No 227
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.56 E-value=0.056 Score=34.39 Aligned_cols=71 Identities=11% Similarity=0.013 Sum_probs=50.3
Q ss_pred EEEEEEccCCCEEEEEeCC--CcEEEEeCCCCeEeeEecCCcc----eeec---cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 7 IFLLQTSQVGQVLAIGTAR--GNLTVYNHMTSKRVPVLGKHTN----TIVG---QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~--g~v~iwd~~~~~~~~~~~~h~~----~i~~---~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
...+.|++ +..+.+.+.+ ..|..+|..+|+.+....-... .+.. .+.+....++.+.+||.++.+.+..+
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 56899987 4455555554 4899999999998876642211 1222 66677788999999999988887765
Q ss_pred C
Q psy12376 78 G 78 (89)
Q Consensus 78 ~ 78 (89)
.
T Consensus 102 ~ 102 (243)
T 3mbr_X 102 R 102 (243)
T ss_dssp E
T ss_pred e
Confidence 3
No 228
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.55 E-value=0.031 Score=39.63 Aligned_cols=54 Identities=19% Similarity=0.161 Sum_probs=41.4
Q ss_pred CCCcEEEEeCCCCeEeeEec----CCcceee-c-cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 24 ARGNLTVYNHMTSKRVPVLG----KHTNTIV-G-QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 24 ~~g~v~iwd~~~~~~~~~~~----~h~~~i~-~-~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
..|.+..||..+|+.+.... ...+++. + .+++.++.|+.|+.||.++|+.+...
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 35789999999999876653 1223333 3 78888999999999999999988755
No 229
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.48 E-value=0.064 Score=33.05 Aligned_cols=68 Identities=4% Similarity=-0.050 Sum_probs=46.5
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE-ecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV-LGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~-~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
.+..++++|+|..+++...++.|.+||. +++.... .......+.+ +++++...++.|..||. +++...
T Consensus 100 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~ 175 (299)
T 2z2n_A 100 APYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE 175 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE
T ss_pred CceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE
Confidence 5789999999998888777889999998 5554332 2222222222 56666666788999998 565543
No 230
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.39 E-value=0.021 Score=36.96 Aligned_cols=71 Identities=14% Similarity=0.115 Sum_probs=51.3
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEe-cCCc--ceeec---cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVL-GKHT--NTIVG---QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~-~~h~--~~i~~---~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
...+.|+. +..+.+.+.+|.|+++|..+|+.+..+ .+.- ..+.. .+.+....++.+.+||.++.+.+..+.
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 46888874 556677777889999999999877665 2211 11222 667777889999999999988877653
No 231
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.36 E-value=0.036 Score=35.15 Aligned_cols=65 Identities=9% Similarity=-0.019 Sum_probs=42.8
Q ss_pred cEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 6 YIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 6 ~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
......|+|+|+ .++++..++.|..|+. +++. ..+..+...+.. +++++...++.|.+||.. ++.
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE
Confidence 357899999998 5677777899999998 4542 333222222222 556655566789999986 544
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.34 E-value=0.03 Score=40.03 Aligned_cols=69 Identities=14% Similarity=0.150 Sum_probs=53.5
Q ss_pred EEEEccCCCEEEEEeCCC-------------------cEEEEeCCCCeEeeEecC--Cc--------ceeec--------
Q psy12376 9 LLQTSQVGQVLAIGTARG-------------------NLTVYNHMTSKRVPVLGK--HT--------NTIVG-------- 51 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g-------------------~v~iwd~~~~~~~~~~~~--h~--------~~i~~-------- 51 (89)
.++++|++..+..++.++ .|..+|.++|+.+..++. |. .++..
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~ 326 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP 326 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE
Confidence 578899999998888775 499999999998877653 31 12222
Q ss_pred -cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 52 -QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 52 -~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+.++.++.+|.|+++|.++|+.+...
T Consensus 327 ~~~l~~~~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 327 RKVILHAPKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred eeEEEEECCCCEEEEEECCCCCEeccc
Confidence 46888999999999999999887543
No 233
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.25 E-value=0.051 Score=34.36 Aligned_cols=45 Identities=11% Similarity=0.074 Sum_probs=36.0
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceee
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIV 50 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~ 50 (89)
....++++++|...++....+.|.+||..+|+.+..+..+...+.
T Consensus 200 ~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t 244 (297)
T 3g4e_A 200 IPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTT 244 (297)
T ss_dssp EEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEE
T ss_pred CCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCce
Confidence 467899999999888888888999999998988877765544343
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.06 E-value=0.0089 Score=40.01 Aligned_cols=41 Identities=10% Similarity=0.042 Sum_probs=33.0
Q ss_pred cEEEEEEccCCC-EEEEEe-CCCcEEEEeCCCCeEeeEecCCc
Q psy12376 6 YIFLLQTSQVGQ-VLAIGT-ARGNLTVYNHMTSKRVPVLGKHT 46 (89)
Q Consensus 6 ~i~~~~~spdg~-~la~g~-~~g~v~iwd~~~~~~~~~~~~h~ 46 (89)
....++|+|||+ .+++.. .++.|.++|+.+++.+..+....
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 467899999998 455555 58999999999999988876443
No 235
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.04 E-value=0.043 Score=39.12 Aligned_cols=67 Identities=16% Similarity=0.155 Sum_probs=52.0
Q ss_pred EEEEccCCCEEEEEeCCCc-------------------EEEEeCCCCeEeeEecC--Cc-------c-eeec--------
Q psy12376 9 LLQTSQVGQVLAIGTARGN-------------------LTVYNHMTSKRVPVLGK--HT-------N-TIVG-------- 51 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~-------------------v~iwd~~~~~~~~~~~~--h~-------~-~i~~-------- 51 (89)
.+++.|++..+..++.++. |..+|.++|+.+..++. |. . .+..
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 4688888888888887764 99999999998877753 32 1 1211
Q ss_pred -cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 52 -QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 52 -~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
+.++.++.+|.++++|.++|+.+.
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~ 338 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLIS 338 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEE
T ss_pred EEEEEEECCCCEEEEEECCCCCEec
Confidence 368899999999999999998773
No 236
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=95.92 E-value=0.12 Score=33.18 Aligned_cols=65 Identities=8% Similarity=-0.097 Sum_probs=42.6
Q ss_pred EEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 7 IFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 7 i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
..+..|+|++. .++++..++.|.+||..+++.. .+.. ...+.+ +++++ +.+ .|.+||..+++...
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~~~v~~i~~~~dg~l~v~-~~~-gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL-PFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTL 123 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC-SSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC-CCcceEEEEeCCCeEEEE-ECC-CEEEEECCCCcEEE
Confidence 46889999754 6667777889999999887643 2221 122332 45554 444 49999998776543
No 237
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.65 E-value=0.19 Score=30.92 Aligned_cols=67 Identities=4% Similarity=0.039 Sum_probs=46.1
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE-ecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV-LGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~-~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~ 73 (89)
..+.+++++++|...++...++.|.+||.. ++.... +..+...+.+ +++++...++.|..||.. ++.
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 357899999999988887788999999987 654332 2222122222 566666667889999987 544
No 238
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.65 E-value=0.076 Score=35.54 Aligned_cols=65 Identities=15% Similarity=0.094 Sum_probs=43.1
Q ss_pred EEEccCCCEEEEEeCCC--cEEEEeCCCCeEeeEe---cC-Ccceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 10 LQTSQVGQVLAIGTARG--NLTVYNHMTSKRVPVL---GK-HTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 10 ~~~spdg~~la~g~~~g--~v~iwd~~~~~~~~~~---~~-h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
++|+|+|+.|+++..++ .|.+++..++.....+ .. ....+.+ ..|..+..++.|+.||..++...
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT 253 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE
Confidence 89999999998888766 7999998765433333 11 1111111 34444777889999999876543
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.61 E-value=0.025 Score=40.40 Aligned_cols=64 Identities=8% Similarity=-0.072 Sum_probs=44.3
Q ss_pred EEEEEEccCCCEEEEEe-CCCcEEEEeCCCCe------------EeeEecCCcceeec------cEEEEEeCCCCEEEEe
Q psy12376 7 IFLLQTSQVGQVLAIGT-ARGNLTVYNHMTSK------------RVPVLGKHTNTIVG------QVLAIGTARGNLTVYN 67 (89)
Q Consensus 7 i~~~~~spdg~~la~g~-~~g~v~iwd~~~~~------------~~~~~~~h~~~i~~------~~las~s~d~~v~iwd 67 (89)
.-++.+||||+++++.. .+..|.++|..+.+ .+.....-.++... ....+...|+.|.+||
T Consensus 279 PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 279 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence 45799999999776655 47799999998642 22333322333221 4566778999999999
Q ss_pred CCC
Q psy12376 68 HMT 70 (89)
Q Consensus 68 ~~~ 70 (89)
+..
T Consensus 359 i~~ 361 (595)
T 1fwx_A 359 IED 361 (595)
T ss_dssp HHH
T ss_pred hhH
Confidence 976
No 240
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.59 E-value=0.2 Score=30.81 Aligned_cols=68 Identities=7% Similarity=0.022 Sum_probs=45.9
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE-ecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV-LGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~-~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
..+.+++++++|..+++...++.|.+||.. ++.... +......+.+ +++++...++.|..||.. ++..
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 357899999999988877778899999987 554322 2212222222 566666667889999987 5443
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.46 E-value=0.11 Score=36.03 Aligned_cols=68 Identities=10% Similarity=0.146 Sum_probs=47.7
Q ss_pred EEEEccCCCEEEEEeCC------CcEEEEeCCCCeEeeEecCCcce------ee--c--cEEEEEe--------------
Q psy12376 9 LLQTSQVGQVLAIGTAR------GNLTVYNHMTSKRVPVLGKHTNT------IV--G--QVLAIGT-------------- 58 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~------g~v~iwd~~~~~~~~~~~~h~~~------i~--~--~~las~s-------------- 58 (89)
.+..+|+| .+++...+ |.|.++|..+++.+..+..-..+ +. - +.+++..
T Consensus 142 ~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~ 220 (462)
T 2ece_A 142 TVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLE 220 (462)
T ss_dssp EEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTT
T ss_pred ceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchh
Confidence 45678999 66655555 78999999999988887522111 21 1 6666663
Q ss_pred -----CCCCEEEEeCCCCEEEeee
Q psy12376 59 -----ARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 59 -----~d~~v~iwd~~~~~~~~~l 77 (89)
.+..|.+||+.+++....+
T Consensus 221 ~~~~~~~d~V~v~D~~~~k~~~tI 244 (462)
T 2ece_A 221 HLKDRYGNRIHFWDLRKRKRIHSL 244 (462)
T ss_dssp THHHHSCCEEEEEETTTTEEEEEE
T ss_pred hhhhccCCEEEEEECCCCcEeeEE
Confidence 3789999999888766654
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.46 E-value=0.095 Score=33.87 Aligned_cols=71 Identities=10% Similarity=0.111 Sum_probs=42.0
Q ss_pred cEEEEEEccCCCEEEEEe--CCCcEEEEeCCCCeEeeEecC-------Ccceeec-------cEEEEEeC-----CCCEE
Q psy12376 6 YIFLLQTSQVGQVLAIGT--ARGNLTVYNHMTSKRVPVLGK-------HTNTIVG-------QVLAIGTA-----RGNLT 64 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~--~~g~v~iwd~~~~~~~~~~~~-------h~~~i~~-------~~las~s~-----d~~v~ 64 (89)
.+..++++|+|+.+++.. .++.+.||.+.+++.. .+.. +...+.. +++++-.. +..|.
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 578999999999988864 2342444444356533 2211 1112221 44444333 57899
Q ss_pred EEeCCCCEEEeee
Q psy12376 65 VYNHMTSKRVPVL 77 (89)
Q Consensus 65 iwd~~~~~~~~~l 77 (89)
+||+.+++.+..+
T Consensus 97 ~~d~~tg~~~~~~ 109 (343)
T 2qe8_A 97 AWDTLNNQLSRVI 109 (343)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEECCCCeEEEEE
Confidence 9999988866544
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.19 E-value=0.15 Score=32.75 Aligned_cols=66 Identities=11% Similarity=-0.041 Sum_probs=35.4
Q ss_pred EccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccce------eec---cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 12 TSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNT------IVG---QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 12 ~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~------i~~---~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+++||+.|..+..++.|.++|..+.+.+..+.- +..+ +.+ ..++....++.|.+-|..+++.+..+
T Consensus 112 lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 112 LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEE
T ss_pred EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEE
Confidence 445666555555566777777766665554431 1111 111 34455555666777777666655544
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.15 E-value=0.14 Score=33.05 Aligned_cols=57 Identities=14% Similarity=-0.013 Sum_probs=28.6
Q ss_pred EEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec--cEEEEEeCCCCEEEEeCCCCEEEee
Q psy12376 20 AIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG--QVLAIGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 20 a~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~--~~las~s~d~~v~iwd~~~~~~~~~ 76 (89)
++...++.+.+||..+++.+..+.. +...+.. +.|..+..++.|.++|.++.+....
T Consensus 110 ~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~ 170 (268)
T 3nok_A 110 QLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGA 170 (268)
T ss_dssp EEESSSCEEEEEETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEE
T ss_pred EEEccCCEEEEEECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEE
Confidence 3444566666666666666555432 2222222 3333333455666666665554443
No 245
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.08 E-value=0.36 Score=30.74 Aligned_cols=67 Identities=10% Similarity=-0.016 Sum_probs=47.5
Q ss_pred cCCcEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEec--CCc--ceeec----cEEEEEeCCCCEEEEeCCC
Q psy12376 3 LRYYIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLG--KHT--NTIVG----QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 3 ~~~~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~--~h~--~~i~~----~~las~s~d~~v~iwd~~~ 70 (89)
..+.+..++|+|++. .+++...++.|...|.. ++.++.+. +.. ..|.. .++++...++.+.++++..
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 345699999999876 55567788899999997 88777653 221 12333 5556666778899998854
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.01 E-value=0.22 Score=31.21 Aligned_cols=60 Identities=12% Similarity=0.076 Sum_probs=40.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 16 GQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 16 g~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+..+.+++.++.+..+|.. ++...........+.+ ..+..++.++.|..+|.. ++.....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~ 172 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRF 172 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEE
Confidence 4567778888999999988 7665554433222221 556777888999999988 6554433
No 247
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.98 E-value=0.34 Score=29.92 Aligned_cols=73 Identities=11% Similarity=0.028 Sum_probs=48.2
Q ss_pred cEEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec---cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 6 YIFLLQTSQVGQVL-AIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG---QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 6 ~i~~~~~spdg~~l-a~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~---~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
....++++|++..| ++-...+.|.++|..++.....+.. +...+.. .++++...++.|..+|..+++.+..+.
T Consensus 168 ~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 168 LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 36789999987655 4555577999999875443332222 2122222 556666677899999998888777663
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.87 E-value=0.2 Score=31.35 Aligned_cols=66 Identities=11% Similarity=0.022 Sum_probs=40.9
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 8 FLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 8 ~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
.++...++|. +.+++.++.+..+|.. ++.+..+......+.+ ..+..++ +.|..+| .+++......
T Consensus 140 ~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~ 211 (330)
T 3hxj_A 140 ATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFY 211 (330)
T ss_dssp SCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEEC
T ss_pred eeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEc
Confidence 3455666776 5567778999999988 7766555432222222 4455555 8899999 5665554443
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.86 E-value=0.21 Score=31.74 Aligned_cols=64 Identities=11% Similarity=0.026 Sum_probs=30.8
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccce------eec---cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 14 QVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNT------IVG---QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 14 pdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~------i~~---~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
+|+..|..+..++.|.++|..+.+.+..+.- +..+ +.+ ..+|....+..|.+-|.++++++..+
T Consensus 112 ~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 112 SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEE
T ss_pred eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEE
Confidence 4455554445555666666665555444322 1111 111 34444444555666666666655543
No 250
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.83 E-value=0.35 Score=30.46 Aligned_cols=69 Identities=10% Similarity=0.008 Sum_probs=40.1
Q ss_pred EEEEEEccCCCEEEEEeCC------CcEEEEeCCCCeE--eeEec----CCcceeec---cEEEEEeCCCCEEEEeCCCC
Q psy12376 7 IFLLQTSQVGQVLAIGTAR------GNLTVYNHMTSKR--VPVLG----KHTNTIVG---QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~------g~v~iwd~~~~~~--~~~~~----~h~~~i~~---~~las~s~d~~v~iwd~~~~ 71 (89)
...++|+|||+.|..+... +.|.+|+...+.. ...+. +....+.. ..|..+..+ .|.+||.. +
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-gv~~~~~~-g 267 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-GVCVFDSD-G 267 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS-EEEEECTT-S
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC-cEEEECCC-C
Confidence 4678999999987776654 7899999865431 11111 11112222 223334444 49999985 4
Q ss_pred EEEeee
Q psy12376 72 KRVPVL 77 (89)
Q Consensus 72 ~~~~~l 77 (89)
+....+
T Consensus 268 ~~~~~~ 273 (305)
T 3dr2_A 268 QLLGHI 273 (305)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 444443
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.67 E-value=0.24 Score=34.76 Aligned_cols=62 Identities=16% Similarity=0.157 Sum_probs=44.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEeeEecCC---------cceeec-cEEEEEeC------CCCEEEEeCCCCEEEeee
Q psy12376 16 GQVLAIGTARGNLTVYNHMTSKRVPVLGKH---------TNTIVG-QVLAIGTA------RGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 16 g~~la~g~~~g~v~iwd~~~~~~~~~~~~h---------~~~i~~-~~las~s~------d~~v~iwd~~~~~~~~~l 77 (89)
+..+..++.++.+..+|..+|+.+...... ..++.. ..+..++. ++.|+.+|.++|+.+...
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 567888889999999999999987765321 112222 45555544 799999999999887654
No 252
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.64 E-value=0.17 Score=35.89 Aligned_cols=68 Identities=24% Similarity=0.203 Sum_probs=46.7
Q ss_pred EEEccCCCE----EEEEeCCCcEEEEeCCCCeEeeEecCCc---------ceeec-cEEEEEe------CCCCEEEEeCC
Q psy12376 10 LQTSQVGQV----LAIGTARGNLTVYNHMTSKRVPVLGKHT---------NTIVG-QVLAIGT------ARGNLTVYNHM 69 (89)
Q Consensus 10 ~~~spdg~~----la~g~~~g~v~iwd~~~~~~~~~~~~h~---------~~i~~-~~las~s------~d~~v~iwd~~ 69 (89)
++.+|.+.. ++.++.|+.+..+|..+|+.+....... .++.. ..++.++ .++.|+.+|.+
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~ 190 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVK 190 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETT
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECC
Confidence 344444444 7888899999999999999877653211 12222 4555554 38999999999
Q ss_pred CCEEEeee
Q psy12376 70 TSKRVPVL 77 (89)
Q Consensus 70 ~~~~~~~l 77 (89)
+|+.+-..
T Consensus 191 TG~~~W~~ 198 (599)
T 1w6s_A 191 TGEQVWRA 198 (599)
T ss_dssp TCCEEEEE
T ss_pred CCcEEEEE
Confidence 99887654
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.58 E-value=0.43 Score=33.60 Aligned_cols=69 Identities=7% Similarity=0.021 Sum_probs=50.4
Q ss_pred EEEEccCCCEEEEEeC--------------------C----CcEEEEeCCCCeEeeEecC--Cc--------ceeec---
Q psy12376 9 LLQTSQVGQVLAIGTA--------------------R----GNLTVYNHMTSKRVPVLGK--HT--------NTIVG--- 51 (89)
Q Consensus 9 ~~~~spdg~~la~g~~--------------------~----g~v~iwd~~~~~~~~~~~~--h~--------~~i~~--- 51 (89)
..++.|+...+..++. | +.|..+|..+|+.+..++. |. .++..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~ 329 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYK 329 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeee
Confidence 3567777777776663 2 6899999999999887642 31 23322
Q ss_pred -------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 52 -------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 52 -------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
..++.++.+|.++++|.++|+.+...
T Consensus 330 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 330 AKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp CSSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCCCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence 26888999999999999999877543
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.25 E-value=0.23 Score=31.95 Aligned_cols=67 Identities=12% Similarity=0.088 Sum_probs=44.9
Q ss_pred EEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccce------eec---cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 11 QTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNT------IVG---QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 11 ~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~------i~~---~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.+++||+.|..+..++.|.++|..+.+.+..+.- ...+ +.+ .++|....+..|.+-|.++++++..+
T Consensus 131 glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 131 GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGII 208 (262)
T ss_dssp CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEE
T ss_pred EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 3446777776666677888888888777665432 1112 222 56666667888889999888887765
No 255
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.54 E-value=0.32 Score=35.08 Aligned_cols=66 Identities=8% Similarity=0.043 Sum_probs=41.1
Q ss_pred cEEEEEEc-cCCCEEEEEeC-CC----cEEEEeCCCC-eEeeE-ecC-Ccceeec---cEEEEEeCC-----CCEEEEeC
Q psy12376 6 YIFLLQTS-QVGQVLAIGTA-RG----NLTVYNHMTS-KRVPV-LGK-HTNTIVG---QVLAIGTAR-----GNLTVYNH 68 (89)
Q Consensus 6 ~i~~~~~s-pdg~~la~g~~-~g----~v~iwd~~~~-~~~~~-~~~-h~~~i~~---~~las~s~d-----~~v~iwd~ 68 (89)
.+...+|| |||++||.+.. +| .|+++|+.+| +.+.. +.. ......+ +.|+....| ..|+.+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 46789999 99999886554 33 4999999988 63211 111 1122222 455555554 35888888
Q ss_pred CCC
Q psy12376 69 MTS 71 (89)
Q Consensus 69 ~~~ 71 (89)
.++
T Consensus 255 gt~ 257 (751)
T 2xe4_A 255 GKL 257 (751)
T ss_dssp TSC
T ss_pred CCC
Confidence 765
No 256
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.41 E-value=0.98 Score=29.96 Aligned_cols=58 Identities=14% Similarity=0.106 Sum_probs=42.7
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEeeEecCC--cceeec--------cEEEEE--eCCCCEEEEeCCCCEEE
Q psy12376 17 QVLAIGTARGNLTVYNHMTSKRVPVLGKH--TNTIVG--------QVLAIG--TARGNLTVYNHMTSKRV 74 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~~~~~~~~~~~~h--~~~i~~--------~~las~--s~d~~v~iwd~~~~~~~ 74 (89)
..++.++.||.|.-+|..+|+.+..+... ...+.. ..+..+ +.||.|+.+|..+|...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence 37889999999999999999998887643 122321 134333 68999999999887554
No 257
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.11 E-value=0.7 Score=32.62 Aligned_cols=67 Identities=16% Similarity=0.291 Sum_probs=45.7
Q ss_pred EEEEccCCCEEEEEeC-CCcEEEEeCCCCeEeeE--ec----CCcceee-c-cEEEEEe-CC-----CCEEEEeCCCCEE
Q psy12376 9 LLQTSQVGQVLAIGTA-RGNLTVYNHMTSKRVPV--LG----KHTNTIV-G-QVLAIGT-AR-----GNLTVYNHMTSKR 73 (89)
Q Consensus 9 ~~~~spdg~~la~g~~-~g~v~iwd~~~~~~~~~--~~----~h~~~i~-~-~~las~s-~d-----~~v~iwd~~~~~~ 73 (89)
++++.++|+.++.|+. +..+.+||..+++.... +. .|...+. . ++++.|+ .+ ..+.+||..++..
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 4677899999999884 55899999887653221 11 1222232 2 7888888 44 5799999988776
Q ss_pred Ee
Q psy12376 74 VP 75 (89)
Q Consensus 74 ~~ 75 (89)
..
T Consensus 327 ~~ 328 (656)
T 1k3i_A 327 TS 328 (656)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 258
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=91.84 E-value=1.2 Score=31.36 Aligned_cols=68 Identities=19% Similarity=0.243 Sum_probs=44.0
Q ss_pred EEEEcc-CCCEEEEEeCCC-----------cEEEEeCCCCeE--eeEec-C---Ccceee--c--cEEEEEe-CCCCEEE
Q psy12376 9 LLQTSQ-VGQVLAIGTARG-----------NLTVYNHMTSKR--VPVLG-K---HTNTIV--G--QVLAIGT-ARGNLTV 65 (89)
Q Consensus 9 ~~~~sp-dg~~la~g~~~g-----------~v~iwd~~~~~~--~~~~~-~---h~~~i~--~--~~las~s-~d~~v~i 65 (89)
.+++.| +|+.++.|+.+. .+.+||..+++. +..+. . |...+. . ++++.|+ .+..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 567777 888888887543 588999987653 22221 1 111111 1 7888887 4568999
Q ss_pred EeCCCCEEEee
Q psy12376 66 YNHMTSKRVPV 76 (89)
Q Consensus 66 wd~~~~~~~~~ 76 (89)
||..+++....
T Consensus 270 yd~~t~~W~~~ 280 (656)
T 1k3i_A 270 YDSSSDSWIPG 280 (656)
T ss_dssp EEGGGTEEEEC
T ss_pred ecCcCCceeEC
Confidence 99987766543
No 259
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.58 E-value=2.7 Score=31.44 Aligned_cols=26 Identities=23% Similarity=0.231 Sum_probs=23.2
Q ss_pred cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 52 QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 52 ~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.++++-+.|++++|||+.+++++...
T Consensus 248 ~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 248 NVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred cEEEEEECCCEEEEEECCCCCeEeee
Confidence 58999999999999999999987754
No 260
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=90.06 E-value=2.5 Score=32.14 Aligned_cols=26 Identities=23% Similarity=0.231 Sum_probs=23.3
Q ss_pred cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 52 QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 52 ~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.++++-+.|++++|||+.+++++...
T Consensus 250 ~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 250 NVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred cEEEEEeCCCEEEEEECCCCCeEEee
Confidence 68999999999999999999987753
No 261
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.95 E-value=1.1 Score=33.45 Aligned_cols=36 Identities=19% Similarity=0.085 Sum_probs=31.8
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV 41 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~ 41 (89)
.+.++...++..++.+-+.|+++++|+..+++++..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 477888888989999999999999999999988664
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=89.75 E-value=2.5 Score=26.58 Aligned_cols=68 Identities=7% Similarity=0.051 Sum_probs=41.2
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--Ccceeec----cEEEEEeCCC--CEEEEeCCCCEEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--HTNTIVG----QVLAIGTARG--NLTVYNHMTSKRV 74 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--h~~~i~~----~~las~s~d~--~v~iwd~~~~~~~ 74 (89)
....++|+|+|+.+++...++.|..||..++ ....+.. +...+.. +++++..... .|..+|..+++..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 4678999999997777778899999998754 3332221 1111111 4444443322 3666776666654
No 263
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.64 E-value=0.78 Score=30.43 Aligned_cols=56 Identities=16% Similarity=0.235 Sum_probs=41.3
Q ss_pred eCCCcEEEEeCCCCeEeeEecC----Ccceee--------------c-cEEEEEeCCCCEEEEeCCCCEEEeeeC
Q psy12376 23 TARGNLTVYNHMTSKRVPVLGK----HTNTIV--------------G-QVLAIGTARGNLTVYNHMTSKRVPVLG 78 (89)
Q Consensus 23 ~~~g~v~iwd~~~~~~~~~~~~----h~~~i~--------------~-~~las~s~d~~v~iwd~~~~~~~~~l~ 78 (89)
+.||.+..++..+|.....+.. ...++. . ..+.+|+.++.+..-|.++|+.+....
T Consensus 64 ~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 64 FGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp STTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred CCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 6899999999988865433321 122222 3 677899999999999999999888764
No 264
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=89.40 E-value=2.5 Score=25.91 Aligned_cols=64 Identities=9% Similarity=0.036 Sum_probs=38.5
Q ss_pred EEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEeeEecCC-cc--ee--ec---cEEEEEeCCCCEEEEeCCC
Q psy12376 7 IFLLQTSQVGQVL-AIGTARGNLTVYNHMTSKRVPVLGKH-TN--TI--VG---QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 7 i~~~~~spdg~~l-a~g~~~g~v~iwd~~~~~~~~~~~~h-~~--~i--~~---~~las~s~d~~v~iwd~~~ 70 (89)
+..++|+|++..| ++...++.|.+++..++.....+... .. .+ .. .++++-..++.|.+++...
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 5689999976555 45555789999998765432222211 11 11 11 4555556667788888754
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=89.38 E-value=4.6 Score=28.99 Aligned_cols=70 Identities=16% Similarity=0.179 Sum_probs=46.5
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC----Ccceeec------cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK----HTNTIVG------QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~----h~~~i~~------~~las~s~d~~v~iwd~~~~~~~ 74 (89)
..|.++...++|..|-+|+.++.+.+||..+++....... ....|.+ ..|-.|+. +.|.+||..+++..
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFT 484 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEE
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEE
Confidence 4588999999998677788888899999988764332211 1233443 33444445 56999999877654
Q ss_pred e
Q psy12376 75 P 75 (89)
Q Consensus 75 ~ 75 (89)
.
T Consensus 485 ~ 485 (795)
T 4a2l_A 485 T 485 (795)
T ss_dssp E
T ss_pred E
Confidence 4
No 266
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=89.35 E-value=1.5 Score=27.80 Aligned_cols=32 Identities=9% Similarity=0.004 Sum_probs=26.4
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR 38 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~ 38 (89)
..+++|+++|..+.++..++.|..||..+++.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~ 52 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF 52 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCce
Confidence 46789999998778888899999999876543
No 267
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=88.98 E-value=3.6 Score=30.25 Aligned_cols=72 Identities=14% Similarity=0.124 Sum_probs=46.7
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE---------------ecC-----Ccceeec-----cEEEEEe
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV---------------LGK-----HTNTIVG-----QVLAIGT 58 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~---------------~~~-----h~~~i~~-----~~las~s 58 (89)
+.+-..++-+++ .++++-.||.+.-.+......... +.+ ....|.| .++++-+
T Consensus 161 R~Ph~L~avs~~--~liVsL~DGGLLrL~r~~~~d~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~~~~fLftL~ 238 (729)
T 3f7f_A 161 RVPHFLFYVSPQ--FSVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLFHERYLIVLT 238 (729)
T ss_dssp SCEEEEEECSSS--BEEEEETTSCEECCEESSSSCEECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEETTTEEEEEE
T ss_pred cCCcEEEEECCC--eEEEEEcCCCEEEEEeccCCCcceeeecCCchhhhhHHhhcCCCCCCcCceEEEeccCCcEEEEEE
Confidence 344555666654 378888888887777543321111 111 1123444 7899999
Q ss_pred CCCCEEEEeCCCCEEEeee
Q psy12376 59 ARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 59 ~d~~v~iwd~~~~~~~~~l 77 (89)
.|.++++||+++++++...
T Consensus 239 ~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 239 QNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp TTCEEEEEETTTTEEEEEE
T ss_pred cCCeEEEEEcCCCceEEee
Confidence 9999999999999977654
No 268
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=88.96 E-value=3 Score=26.26 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=40.3
Q ss_pred cEEEEEEccCCCEEEEEeCCC--cEEEEeCCCCeEeeEec-CCcc---eee--c--cEEEEEeCCCCEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARG--NLTVYNHMTSKRVPVLG-KHTN---TIV--G--QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g--~v~iwd~~~~~~~~~~~-~h~~---~i~--~--~~las~s~d~~v~iwd~~~~ 71 (89)
....++++|+|+.+++..... .|..+|..+++...... .... .+. . ..+++-..++.|+++|...+
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 467899999999766654432 47778877776533221 1111 111 1 34555556888999998654
No 269
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=87.51 E-value=6.2 Score=28.43 Aligned_cols=30 Identities=10% Similarity=0.187 Sum_probs=23.5
Q ss_pred EEEEEEccCCCEEEEEeC---CCcEEEEeCCCC
Q psy12376 7 IFLLQTSQVGQVLAIGTA---RGNLTVYNHMTS 36 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~---~g~v~iwd~~~~ 36 (89)
...+.|||||++|+..+. ...|.++|..++
T Consensus 273 ~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 273 SAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 567899999999887663 347888898765
No 270
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=87.37 E-value=6 Score=30.39 Aligned_cols=65 Identities=14% Similarity=0.073 Sum_probs=45.6
Q ss_pred CCcEEEEEEccC------CCEEEEEeC-CCcEEEEeCCCCeEeeE--ecCCcceeec---------cEEEEEeCCCCEEE
Q psy12376 4 RYYIFLLQTSQV------GQVLAIGTA-RGNLTVYNHMTSKRVPV--LGKHTNTIVG---------QVLAIGTARGNLTV 65 (89)
Q Consensus 4 ~~~i~~~~~spd------g~~la~g~~-~g~v~iwd~~~~~~~~~--~~~h~~~i~~---------~~las~s~d~~v~i 65 (89)
.+.|+|+++.|. +.++|+|.+ |++++|++..+.+.+.. +... ...++ .+|..|-.||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~-~~p~si~l~~~~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGE-IIPRSILMTTFESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSS-CCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCC-CCCcEEEEEEeCCCcEEEEEeCCCeEEE
Confidence 467999999874 369999997 99999999987665432 2211 11111 57889999998866
Q ss_pred EeCC
Q psy12376 66 YNHM 69 (89)
Q Consensus 66 wd~~ 69 (89)
+.+.
T Consensus 632 ~~~d 635 (1158)
T 3ei3_A 632 FGLN 635 (1158)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6553
No 271
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=85.31 E-value=1.1 Score=34.07 Aligned_cols=35 Identities=20% Similarity=0.105 Sum_probs=29.7
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV 41 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~ 41 (89)
+.+++..++..++.+=+.|+++++|+..+++++..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 45566778888999999999999999999987654
No 272
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=85.19 E-value=8.6 Score=27.65 Aligned_cols=71 Identities=11% Similarity=0.114 Sum_probs=45.6
Q ss_pred EEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEec-----CCcceee--c-cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 7 IFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLG-----KHTNTIV--G-QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 7 i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~-----~h~~~i~--~-~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
...|+|+|++. ++++-+..+.|.+++.........+. .|...|. . .++++....+.|..+|..+++.+..+
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECC
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEe
Confidence 45799999755 55555567789999986432222221 1222222 2 66777778889999998888776665
No 273
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=84.67 E-value=5.6 Score=28.53 Aligned_cols=30 Identities=7% Similarity=-0.105 Sum_probs=23.8
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~ 35 (89)
....++|+|+|...++---|++|.+||+..
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 468899999994444556699999999876
No 274
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=84.61 E-value=4.8 Score=27.96 Aligned_cols=66 Identities=11% Similarity=0.186 Sum_probs=44.3
Q ss_pred c--cCCCEEEE-EeCCCcEEEEeCCCC----eEeeEec--------CCcc--eeec---cEEEEEeCC------CCEEEE
Q psy12376 13 S--QVGQVLAI-GTARGNLTVYNHMTS----KRVPVLG--------KHTN--TIVG---QVLAIGTAR------GNLTVY 66 (89)
Q Consensus 13 s--pdg~~la~-g~~~g~v~iwd~~~~----~~~~~~~--------~h~~--~i~~---~~las~s~d------~~v~iw 66 (89)
+ +++++|.+ +-.++.|.++|..+. +....+. +... .+.| .+++++..+ +.|.+.
T Consensus 90 ~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 90 KPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEE
T ss_pred CCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEE
Confidence 7 88887765 555789999998755 4444442 1111 1233 566666665 789999
Q ss_pred eCCCCEEEeeeC
Q psy12376 67 NHMTSKRVPVLG 78 (89)
Q Consensus 67 d~~~~~~~~~l~ 78 (89)
|.++++.+....
T Consensus 170 D~~T~~v~~~~~ 181 (462)
T 2ece_A 170 DHYSFEPLGKWE 181 (462)
T ss_dssp CTTTCCEEEECC
T ss_pred ECCCCeEEEEEc
Confidence 999888887664
No 275
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=83.83 E-value=9.9 Score=27.26 Aligned_cols=71 Identities=21% Similarity=0.299 Sum_probs=47.8
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecC--------Ccceeec------cE-EEEEeCCCCEEEEeCC
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGK--------HTNTIVG------QV-LAIGTARGNLTVYNHM 69 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~--------h~~~i~~------~~-las~s~d~~v~iwd~~ 69 (89)
..|.++...++|.. -+|+.++.|..||..+++....... ....|.+ .. |-.|+.++.|..||..
T Consensus 357 ~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 357 NVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp SSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred CeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 35889999998864 4578888899999887654332211 1233443 33 7777887889999998
Q ss_pred CCEEEee
Q psy12376 70 TSKRVPV 76 (89)
Q Consensus 70 ~~~~~~~ 76 (89)
+++....
T Consensus 436 ~~~~~~~ 442 (795)
T 4a2l_A 436 SGQVENF 442 (795)
T ss_dssp TCCEEEE
T ss_pred CCcEEEe
Confidence 7765443
No 276
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=83.81 E-value=4.7 Score=27.96 Aligned_cols=64 Identities=11% Similarity=0.173 Sum_probs=43.4
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe------------EeeEec--C----Ccceeec----------cEEEEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK------------RVPVLG--K----HTNTIVG----------QVLAIG 57 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~------------~~~~~~--~----h~~~i~~----------~~las~ 57 (89)
.+..+..||+|.+||.-+ +..|.|-....+. ..+.+. . ...+|.. ..|+.=
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 467899999999999975 5578887776221 011121 0 1233433 578888
Q ss_pred eCCCCEEEEeCCC
Q psy12376 58 TARGNLTVYNHMT 70 (89)
Q Consensus 58 s~d~~v~iwd~~~ 70 (89)
..|+.|++||+..
T Consensus 146 tsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 146 KEDDTITMFDILN 158 (452)
T ss_dssp ETTSCEEEEETTC
T ss_pred ecCCEEEEEEccc
Confidence 9999999999964
No 277
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=83.31 E-value=6.1 Score=24.84 Aligned_cols=36 Identities=6% Similarity=0.046 Sum_probs=26.0
Q ss_pred EEEEEEccCCCEEEEEeC----------CCcEEEEeCCCCeEeeEec
Q psy12376 7 IFLLQTSQVGQVLAIGTA----------RGNLTVYNHMTSKRVPVLG 43 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~----------~g~v~iwd~~~~~~~~~~~ 43 (89)
...+++.++|...++... .+.|.++|.. |+.+..+.
T Consensus 231 P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~ 276 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIP 276 (322)
T ss_dssp EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEE
T ss_pred CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEE
Confidence 567899999986666544 4678899874 66666554
No 278
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=83.30 E-value=2.5 Score=29.35 Aligned_cols=32 Identities=6% Similarity=0.120 Sum_probs=27.9
Q ss_pred CCcEEEEEEccCC---CEEEEEeCCCcEEEEeCCC
Q psy12376 4 RYYIFLLQTSQVG---QVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 4 ~~~i~~~~~spdg---~~la~g~~~g~v~iwd~~~ 35 (89)
+.+|..+.|+|-| ..|++=+.|+.|++||+..
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 4569999999965 5899999999999999975
No 279
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=81.39 E-value=3.5 Score=27.32 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=26.7
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKR 38 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~ 38 (89)
..+.++|.|||..+++--..|.|.+++..+++.
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~ 65 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK 65 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcE
Confidence 468999999999887776689999998766553
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=80.51 E-value=9.1 Score=24.58 Aligned_cols=67 Identities=13% Similarity=-0.028 Sum_probs=40.7
Q ss_pred EEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEeeEec---CCcceeec---cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 7 IFLLQTSQVGQVL-AIGTARGNLTVYNHMTSKRVPVLG---KHTNTIVG---QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 7 i~~~~~spdg~~l-a~g~~~g~v~iwd~~~~~~~~~~~---~h~~~i~~---~~las~s~d~~v~iwd~~~~~~ 73 (89)
...++|+|++..| .+-+..+.|..+|........... .|...+.. .++.+-...+.|..+|..+++.
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCc
Confidence 5789999966655 444557789999986432212222 12222221 5666666778888888866553
No 281
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=80.36 E-value=6.1 Score=29.08 Aligned_cols=34 Identities=12% Similarity=0.018 Sum_probs=27.2
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPV 41 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~ 41 (89)
.|.++.+ +..++++=+.|+++++|+.++++++..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 3565555 467999999999999999999987654
No 282
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=75.03 E-value=4 Score=29.49 Aligned_cols=64 Identities=9% Similarity=-0.064 Sum_probs=41.7
Q ss_pred EEEEEEccCCCEEEEEeC-CCcEEEEeCCC------CeE-------eeEecCCcceeec------cEEEEEeCCCCEEEE
Q psy12376 7 IFLLQTSQVGQVLAIGTA-RGNLTVYNHMT------SKR-------VPVLGKHTNTIVG------QVLAIGTARGNLTVY 66 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~-~g~v~iwd~~~------~~~-------~~~~~~h~~~i~~------~~las~s~d~~v~iw 66 (89)
.-.+..+|||++++++.. +.++.++|.+. ++. +.+.+--.+++.. +...|--.|..|.-|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence 345789999998877665 77999999874 111 2222222334332 344555689999999
Q ss_pred eCCC
Q psy12376 67 NHMT 70 (89)
Q Consensus 67 d~~~ 70 (89)
|+..
T Consensus 405 ni~~ 408 (638)
T 3sbq_A 405 NMEE 408 (638)
T ss_dssp EHHH
T ss_pred eccH
Confidence 9964
No 283
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=74.79 E-value=14 Score=23.59 Aligned_cols=61 Identities=18% Similarity=0.033 Sum_probs=35.7
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec---CCcc---eeec---cEEEEEeCCCCEEEEeC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG---KHTN---TIVG---QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~---~h~~---~i~~---~~las~s~d~~v~iwd~ 68 (89)
.+..+.+.|++..++++. +|.+. +....|+.-..+. .... .|.. ..++.++.+|.|.-++-
T Consensus 251 ~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 251 GFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp CEEEEEESSSSCEEEEES-TTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred ceEEEEecCCCEEEEEeC-CCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 488999999888777765 66663 4444454333332 1111 2211 55667778887766654
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=74.67 E-value=16 Score=24.41 Aligned_cols=63 Identities=11% Similarity=0.042 Sum_probs=40.6
Q ss_pred EEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeE--ecCCcce--eec----c-EEEEEeCCCCEEEEeCC
Q psy12376 7 IFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPV--LGKHTNT--IVG----Q-VLAIGTARGNLTVYNHM 69 (89)
Q Consensus 7 i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~--~~~h~~~--i~~----~-~las~s~d~~v~iwd~~ 69 (89)
...++++| +|..+++-..++.|..++..++..... ......+ |.- + ++++-..++.|+.++..
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 45688999 788777777889999999987654222 2221111 211 4 56666677788887764
No 285
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=73.88 E-value=4 Score=27.14 Aligned_cols=28 Identities=18% Similarity=0.180 Sum_probs=22.3
Q ss_pred EEEEEEccCCCEEEEE-eCCCcEEEEeCC
Q psy12376 7 IFLLQTSQVGQVLAIG-TARGNLTVYNHM 34 (89)
Q Consensus 7 i~~~~~spdg~~la~g-~~~g~v~iwd~~ 34 (89)
...++|||||+.|..+ +..+.|..|+..
T Consensus 223 pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 223 ANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 4689999999876554 457899999975
No 286
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=73.26 E-value=14 Score=22.90 Aligned_cols=61 Identities=21% Similarity=0.305 Sum_probs=37.0
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEeeE--ec----CCcceeec-cEEEEEeCCC-----CEEEEeCCCCEEEe
Q psy12376 15 VGQVLAIGTAR-----GNLTVYNHMTSKRVPV--LG----KHTNTIVG-QVLAIGTARG-----NLTVYNHMTSKRVP 75 (89)
Q Consensus 15 dg~~la~g~~~-----g~v~iwd~~~~~~~~~--~~----~h~~~i~~-~~las~s~d~-----~v~iwd~~~~~~~~ 75 (89)
+++.++.|+.+ ..+.+||..+++-... +. .|...+.. ++++.|+.++ .+.+||+++++-..
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 56677777654 3688999987653221 11 11111111 6777777653 59999998887654
No 287
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=71.67 E-value=20 Score=24.17 Aligned_cols=72 Identities=13% Similarity=0.175 Sum_probs=50.1
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCC-CEEEeeeCCCC
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMT-SKRVPVLGKHT 81 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~-~~~~~~l~~h~ 81 (89)
+.-.+|..+.||.-. ...+.+||+.+...+..+.-.. .|.. +.|+--+ +..|+-|+++. ....+.+.+|.
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSSSEEEEEE-SSEEEEEESSTTCCCEEEEECCG
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCCCeEEEEc-CCcEEEEcccCCCCCceeeecch
Confidence 445688889888876 5699999999987776655332 3333 6666664 45699999964 45556667776
Q ss_pred CC
Q psy12376 82 KS 83 (89)
Q Consensus 82 ~~ 83 (89)
.-
T Consensus 148 ~L 149 (365)
T 2xzh_A 148 SL 149 (365)
T ss_dssp GG
T ss_pred hc
Confidence 54
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=71.36 E-value=20 Score=23.98 Aligned_cols=64 Identities=16% Similarity=0.221 Sum_probs=41.7
Q ss_pred cEEEEEE--ccC-CC-EEEEEeCCCcEEEEeCC-------CCeEeeEecCCcce---eec---cEEEEEeCCCCEEEEeC
Q psy12376 6 YIFLLQT--SQV-GQ-VLAIGTARGNLTVYNHM-------TSKRVPVLGKHTNT---IVG---QVLAIGTARGNLTVYNH 68 (89)
Q Consensus 6 ~i~~~~~--spd-g~-~la~g~~~g~v~iwd~~-------~~~~~~~~~~h~~~---i~~---~~las~s~d~~v~iwd~ 68 (89)
.++.+++ +|. ++ ++.+...+|.+..|++. +++.++.+.-...+ +.. .+|..+.+|..|..++.
T Consensus 129 ~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 129 EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEEC
T ss_pred CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeC
Confidence 4566777 774 54 67788889999998872 23556666532221 111 68888889877777775
Q ss_pred C
Q psy12376 69 M 69 (89)
Q Consensus 69 ~ 69 (89)
+
T Consensus 209 ~ 209 (355)
T 3amr_A 209 E 209 (355)
T ss_dssp S
T ss_pred C
Confidence 4
No 289
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=70.87 E-value=9.1 Score=24.92 Aligned_cols=28 Identities=14% Similarity=0.076 Sum_probs=22.0
Q ss_pred cEEEEEEccCCC-EEEEEeCCCcEEEEeCC
Q psy12376 6 YIFLLQTSQVGQ-VLAIGTARGNLTVYNHM 34 (89)
Q Consensus 6 ~i~~~~~spdg~-~la~g~~~g~v~iwd~~ 34 (89)
..+.|+|.|||. +++ +...|.|.+++..
T Consensus 19 ~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLI-TLRGGELRHWQAG 47 (353)
T ss_dssp SEEEEEECSTTCCEEE-EETTTEEEEEETT
T ss_pred CcEEEEEcCCCCEEEE-EeCCceEEEEeCC
Confidence 367899999999 554 4567999999853
No 290
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=69.92 E-value=17 Score=22.45 Aligned_cols=61 Identities=15% Similarity=0.239 Sum_probs=36.2
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEeeE--ec----CCcceeec-cEEEEEeCC-----CCEEEEeCCCCEEEe
Q psy12376 15 VGQVLAIGTAR-----GNLTVYNHMTSKRVPV--LG----KHTNTIVG-QVLAIGTAR-----GNLTVYNHMTSKRVP 75 (89)
Q Consensus 15 dg~~la~g~~~-----g~v~iwd~~~~~~~~~--~~----~h~~~i~~-~~las~s~d-----~~v~iwd~~~~~~~~ 75 (89)
+++.++.|+.+ ..+.+||..+++-... +. .|...+.. ++++.|+.+ ..+.+||+++++-..
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 283 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEV 283 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEE
Confidence 56677777653 4689999987653221 11 11111111 677777765 468899998776543
No 291
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=67.82 E-value=12 Score=25.42 Aligned_cols=32 Identities=16% Similarity=0.040 Sum_probs=24.2
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK 37 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~ 37 (89)
..+.++|.|||.++++-...+.|.+++..+++
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGS 59 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCc
Confidence 46799999999987775544578888865554
No 292
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=66.99 E-value=4.9 Score=25.51 Aligned_cols=28 Identities=14% Similarity=0.068 Sum_probs=22.3
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMT 35 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~ 35 (89)
.+..++|+|+|...|+ .+|.+.-.+..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t 69 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPT 69 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCC
Confidence 4678999999997777 678887777654
No 293
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=65.87 E-value=25 Score=23.02 Aligned_cols=68 Identities=16% Similarity=0.085 Sum_probs=40.2
Q ss_pred EEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEeeEecC---Ccceeec---cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 7 IFLLQTSQVGQVL-AIGTARGNLTVYNHMTSKRVPVLGK---HTNTIVG---QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 7 i~~~~~spdg~~l-a~g~~~g~v~iwd~~~~~~~~~~~~---h~~~i~~---~~las~s~d~~v~iwd~~~~~~~ 74 (89)
...|+|+|++..| .+-+..+.|..+|.........+.. |...|.. .++.+-...+.|..+|..+++..
T Consensus 248 PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQ 322 (386)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred eeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcce
Confidence 5789999876655 4445567899999764332222221 2222221 56666677778888885455433
No 294
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=65.53 E-value=34 Score=24.43 Aligned_cols=67 Identities=19% Similarity=0.160 Sum_probs=42.5
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEec--CCcceeec------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLG--KHTNTIVG------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~--~h~~~i~~------~~las~s~d~~v~iwd~~~~~~ 73 (89)
..|.++...++|...+ |+.++.+..+|..+++...... .....|.+ ..|-.|+. +.|..||..+++.
T Consensus 407 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKV 481 (781)
T ss_dssp SBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSC
T ss_pred cceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeE
Confidence 4588888888886554 6777789999988776432211 12234443 34555555 5689999876544
No 295
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=64.94 E-value=35 Score=24.36 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=42.5
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCC-----cceeec------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKH-----TNTIVG------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h-----~~~i~~------~~las~s~d~~v~iwd~~~~~~ 73 (89)
..|.++...++|.. -+|+. +.+.++|..+++........ ...|.+ ..|-.|+.++.|..||.++++.
T Consensus 450 ~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 450 LDVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV 527 (781)
T ss_dssp CCEEEEEECTTSEE-EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE
T ss_pred CeEEEEEECCCCCE-EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE
Confidence 45888888888864 44555 56889998776543322111 233433 4455566655688899876655
Q ss_pred Ee
Q psy12376 74 VP 75 (89)
Q Consensus 74 ~~ 75 (89)
..
T Consensus 528 ~~ 529 (781)
T 3v9f_A 528 RK 529 (781)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 296
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=63.56 E-value=28 Score=22.78 Aligned_cols=65 Identities=11% Similarity=-0.012 Sum_probs=37.3
Q ss_pred cEEEEEEccCCC-EEEEEeCCCcEEEEeCCCCeEeeEecCC----cc-eeec---cEEEEEeCCCCEEEEeCCC
Q psy12376 6 YIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTSKRVPVLGKH----TN-TIVG---QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 6 ~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~~~~~~~~~h----~~-~i~~---~~las~s~d~~v~iwd~~~ 70 (89)
....++|++.+. .+.+-...+.|..++..++.....+... .+ .+.- +++++-...+.|.+.++..
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTS
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC
Confidence 467899997655 4455556788999998765432322211 11 1111 4455555566677766653
No 297
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=63.08 E-value=28 Score=22.48 Aligned_cols=67 Identities=16% Similarity=0.120 Sum_probs=38.5
Q ss_pred cEEEEEEccCCCEEE-EEeCCCcEEEEeCCCCeEeeEecC---Ccceeec---cEEEEEeCCCCEEEEeCCCCE
Q psy12376 6 YIFLLQTSQVGQVLA-IGTARGNLTVYNHMTSKRVPVLGK---HTNTIVG---QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 6 ~i~~~~~spdg~~la-~g~~~g~v~iwd~~~~~~~~~~~~---h~~~i~~---~~las~s~d~~v~iwd~~~~~ 72 (89)
....++|+|++..|. +-+..+.|..+|.........+.. |...|.. .++.+-...+.|...|..+++
T Consensus 204 ~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred CcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence 367899998766554 445567899999765322222221 2222221 455555666777777754444
No 298
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=62.56 E-value=20 Score=23.26 Aligned_cols=26 Identities=15% Similarity=0.255 Sum_probs=21.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEe
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYN 32 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd 32 (89)
..+.++|.|||.++++ ..+|.|.+++
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~ 57 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR 57 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE
Confidence 3678999999996655 5569999998
No 299
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=61.86 E-value=27 Score=22.04 Aligned_cols=69 Identities=9% Similarity=0.056 Sum_probs=42.1
Q ss_pred cEEEEEEccCCCEEE-EEeCCCcEEEEeCCCCeEeeEe-c-----CCcceeec---cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 6 YIFLLQTSQVGQVLA-IGTARGNLTVYNHMTSKRVPVL-G-----KHTNTIVG---QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 6 ~i~~~~~spdg~~la-~g~~~g~v~iwd~~~~~~~~~~-~-----~h~~~i~~---~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
....++|+|++..|. +-+..+.|..+|..... .+.+ . .|...+.. .++.+-...+.|..+|..+++...
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 243 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred CceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceE
Confidence 367899999776554 44456799999986432 2222 1 12122221 566666777888888876655433
No 300
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=61.86 E-value=39 Score=23.79 Aligned_cols=73 Identities=12% Similarity=0.161 Sum_probs=50.2
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcc-----eeeccEEEEEeCCCCEEEEeCCC-CEEEeeeCCCCC
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTN-----TIVGQVLAIGTARGNLTVYNHMT-SKRVPVLGKHTK 82 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~-----~i~~~~las~s~d~~v~iwd~~~-~~~~~~l~~h~~ 82 (89)
+.-.+|..+.||.-. ...+.|||+.+...+..+.-... +|..+.|+-. .+..|+-|++.+ ....+.+.+|..
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEE-CSSEEEEEESSSSCCCEEEEECCGG
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEE-cCCeeEEecccCCCCchhheecchh
Confidence 455688888888876 66999999998877766543322 2222677776 456799999964 345566677765
Q ss_pred C
Q psy12376 83 S 83 (89)
Q Consensus 83 ~ 83 (89)
-
T Consensus 148 L 148 (494)
T 1bpo_A 148 L 148 (494)
T ss_dssp G
T ss_pred c
Confidence 4
No 301
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=61.67 E-value=32 Score=22.72 Aligned_cols=70 Identities=11% Similarity=0.068 Sum_probs=43.1
Q ss_pred cEEEEEEccCCCEEEEE-eCCCcEEEEeCCCCeEeeEecC-----Ccceeec---cEEEEEeCCCCEEEEeCCCCEEEe
Q psy12376 6 YIFLLQTSQVGQVLAIG-TARGNLTVYNHMTSKRVPVLGK-----HTNTIVG---QVLAIGTARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g-~~~g~v~iwd~~~~~~~~~~~~-----h~~~i~~---~~las~s~d~~v~iwd~~~~~~~~ 75 (89)
....|+++|++..|..+ +..+.|..+|............ |...+.- .++.+-...+.|..+|..+++...
T Consensus 247 ~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceE
Confidence 46789999877766554 4567899999865432222221 2222221 566777778889988866664433
No 302
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=61.32 E-value=27 Score=21.77 Aligned_cols=62 Identities=19% Similarity=0.244 Sum_probs=36.8
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCeEeeE--ec----CCcceeec-cEEEEEeCC--------------CCEEEEeC
Q psy12376 15 VGQVLAIGTARG-----NLTVYNHMTSKRVPV--LG----KHTNTIVG-QVLAIGTAR--------------GNLTVYNH 68 (89)
Q Consensus 15 dg~~la~g~~~g-----~v~iwd~~~~~~~~~--~~----~h~~~i~~-~~las~s~d--------------~~v~iwd~ 68 (89)
+++.++.|+.++ .+.+||..+++-... +. .|...+.. ++++.|+.+ ..+.+||+
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~ 275 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNE 275 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEET
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecC
Confidence 667777776544 588999887653221 11 11111111 677777764 24789999
Q ss_pred CCCEEEee
Q psy12376 69 MTSKRVPV 76 (89)
Q Consensus 69 ~~~~~~~~ 76 (89)
++++-...
T Consensus 276 ~~~~W~~~ 283 (315)
T 4asc_A 276 EEKKWEGV 283 (315)
T ss_dssp TTTEEEEE
T ss_pred CCChhhhh
Confidence 88776554
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=60.57 E-value=27 Score=21.57 Aligned_cols=61 Identities=11% Similarity=0.137 Sum_probs=37.4
Q ss_pred CCCEEEEEeCC----CcEEEEeCCCCeEeeE--ec----CCcceeec-cEEEEEeCC------CCEEEEeCCCCEEEe
Q psy12376 15 VGQVLAIGTAR----GNLTVYNHMTSKRVPV--LG----KHTNTIVG-QVLAIGTAR------GNLTVYNHMTSKRVP 75 (89)
Q Consensus 15 dg~~la~g~~~----g~v~iwd~~~~~~~~~--~~----~h~~~i~~-~~las~s~d------~~v~iwd~~~~~~~~ 75 (89)
++..++.|+.+ ..+.+||..+++-... +. .|...+.. ++++.|+.+ ..+.+||..+++...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56677777644 5788899887653221 11 11111111 677777765 569999998877544
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=59.70 E-value=12 Score=24.33 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=22.7
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSK 37 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~ 37 (89)
..+.++|.|||.++++ ..+|.|.+++. +++
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~ 59 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISP-SGK 59 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECS-SCE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCc
Confidence 4688999999985555 55699999974 454
No 305
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=59.69 E-value=32 Score=22.16 Aligned_cols=66 Identities=9% Similarity=0.016 Sum_probs=38.2
Q ss_pred cEEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEeeEecCC-c--ceee-c----cEEEEEeCCCCEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVL-AIGTARGNLTVYNHMTSKRVPVLGKH-T--NTIV-G----QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 6 ~i~~~~~spdg~~l-a~g~~~g~v~iwd~~~~~~~~~~~~h-~--~~i~-~----~~las~s~d~~v~iwd~~~~ 71 (89)
....++|++....| .+-...+.|..++..++.....+... . ..+. . +++++-...+.|.+.+++..
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence 36789999765544 45556778999998765432222111 1 1111 1 45555566677777777543
No 306
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=58.33 E-value=32 Score=21.71 Aligned_cols=66 Identities=9% Similarity=0.046 Sum_probs=36.3
Q ss_pred cEEEEEEccCCCEE-EEEeCCCcEEEEeCCC----CeEeeEecC---Ccce--ee-c--cEEEEEeCCCCEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVL-AIGTARGNLTVYNHMT----SKRVPVLGK---HTNT--IV-G--QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 6 ~i~~~~~spdg~~l-a~g~~~g~v~iwd~~~----~~~~~~~~~---h~~~--i~-~--~~las~s~d~~v~iwd~~~~ 71 (89)
....++|++++..| .+-..++.|..++..+ ......+.. .... +. . +++++-..++.|.+.|....
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 36789999876544 5555578999999875 221122211 1111 11 1 45555566777888887643
No 307
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=55.59 E-value=41 Score=22.15 Aligned_cols=67 Identities=9% Similarity=0.064 Sum_probs=35.3
Q ss_pred cEEEEEEccCCCEEE-EEeCCCcEEEEeCCCC----eEeeEecCCc-c----eeec---cEEEEEeCCCCEEEEeCCCCE
Q psy12376 6 YIFLLQTSQVGQVLA-IGTARGNLTVYNHMTS----KRVPVLGKHT-N----TIVG---QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 6 ~i~~~~~spdg~~la-~g~~~g~v~iwd~~~~----~~~~~~~~h~-~----~i~~---~~las~s~d~~v~iwd~~~~~ 72 (89)
.+..++|++....|. +-...+.|..++.... .....+.... . .+.. +++++-...+.|.+.+++...
T Consensus 113 ~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~ 192 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 192 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS
T ss_pred cceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCc
Confidence 478899998655554 4445678888887642 1112222111 1 1111 455555566677777765443
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=54.02 E-value=74 Score=24.58 Aligned_cols=57 Identities=7% Similarity=0.009 Sum_probs=33.9
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEeeEe-cCCcceeec-------------cEEEEEeC-CCCEEEEeCCCCEEE
Q psy12376 17 QVLAIGTARGNLTVYNHMTSKRVPVL-GKHTNTIVG-------------QVLAIGTA-RGNLTVYNHMTSKRV 74 (89)
Q Consensus 17 ~~la~g~~~g~v~iwd~~~~~~~~~~-~~h~~~i~~-------------~~las~s~-d~~v~iwd~~~~~~~ 74 (89)
.+++.++ .+.+.++++..++..... ..-...|.| .++|.|.. |++|+|+++.+-+.+
T Consensus 524 ~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~ 595 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 595 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE
T ss_pred CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE
Confidence 3555554 567777777655321110 011233444 58888886 999999999764443
No 309
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=52.54 E-value=50 Score=22.13 Aligned_cols=63 Identities=10% Similarity=-0.011 Sum_probs=38.6
Q ss_pred EEEEEEcc-CCCEEEEEeCCCcEEEEeCCCCeEeeEe-c--CCcc--eeec----c-EEEEEeCCCCEEEEeCC
Q psy12376 7 IFLLQTSQ-VGQVLAIGTARGNLTVYNHMTSKRVPVL-G--KHTN--TIVG----Q-VLAIGTARGNLTVYNHM 69 (89)
Q Consensus 7 i~~~~~sp-dg~~la~g~~~g~v~iwd~~~~~~~~~~-~--~h~~--~i~~----~-~las~s~d~~v~iwd~~ 69 (89)
...++++| +|...++-..++.|+.+|..+++....+ . .... .|.. + ++++-..++.|+.++..
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 35688999 7777777777889999998877652222 1 1111 1221 3 55555566777776654
No 310
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=52.25 E-value=52 Score=22.24 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=41.5
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-cEEEEEe--CCCCEEEEeCCCCEEEe
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-QVLAIGT--ARGNLTVYNHMTSKRVP 75 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-~~las~s--~d~~v~iwd~~~~~~~~ 75 (89)
..++..|+-...+..-+.-|-+++||+.+|.++..- +|.. ..|+++. ..+.+..-| +.|+++.
T Consensus 262 PVamqvs~kygviyviTK~G~ihlyDleTgt~i~~n-----rIS~d~iF~ta~~~~~~Gi~~Vn-r~GqVl~ 327 (365)
T 2xzh_A 262 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN-----RISGETIFVTAPHEATAGIIGVN-RKGQVLS 327 (365)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEEEGGGTEEEEEE-TTCEEEE
T ss_pred eEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEe-----ccCCCceEEecccCCCCcEEEEc-CCCEEEE
Confidence 467888887788888999999999999999875432 2322 4454443 224444445 4455544
No 311
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=52.15 E-value=22 Score=23.81 Aligned_cols=28 Identities=11% Similarity=0.032 Sum_probs=21.6
Q ss_pred EEEEEEccCCCE-EEEEeCCCcEEEEeCC
Q psy12376 7 IFLLQTSQVGQV-LAIGTARGNLTVYNHM 34 (89)
Q Consensus 7 i~~~~~spdg~~-la~g~~~g~v~iwd~~ 34 (89)
...++|+|+|++ +++-..++.|.+++..
T Consensus 272 P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 272 EFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 578999999995 4555567899998754
No 312
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=48.59 E-value=70 Score=22.73 Aligned_cols=65 Identities=29% Similarity=0.268 Sum_probs=38.1
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~~~~ 73 (89)
|.++...+++..|-+|+. +.+..+|..+++......-....|.+ ..|-.|+. +.+.++|..+++.
T Consensus 193 i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~~ 263 (758)
T 3ott_A 193 VNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTD-NGLYVYHNDTTPL 263 (758)
T ss_dssp EEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEET-TEEEEECCTTSCC
T ss_pred eEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeC-CceeEEecCCCcE
Confidence 778888887776666664 56888998776542211101122333 34444554 4588888866543
No 313
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=48.59 E-value=25 Score=24.13 Aligned_cols=29 Identities=17% Similarity=0.005 Sum_probs=22.1
Q ss_pred cEEEEEEccCCC-EEEEEeCCCcEEEEeCC
Q psy12376 6 YIFLLQTSQVGQ-VLAIGTARGNLTVYNHM 34 (89)
Q Consensus 6 ~i~~~~~spdg~-~la~g~~~g~v~iwd~~ 34 (89)
..+.|+|.|||. .|++....|.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 367899999996 34445678999999754
No 314
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=48.40 E-value=50 Score=20.93 Aligned_cols=25 Identities=20% Similarity=0.256 Sum_probs=18.2
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTV 30 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~i 30 (89)
..+..+.+.|++.+++.+.. |.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~-G~~~~ 187 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSR-GSFYS 187 (327)
T ss_dssp CCEEEEEECTTSCEEEEETT-SSEEE
T ss_pred cceEEEEEcCCCcEEEEECC-CcEEE
Confidence 45788999999988877754 44444
No 315
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=47.47 E-value=71 Score=22.49 Aligned_cols=63 Identities=16% Similarity=0.192 Sum_probs=41.6
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-cEEEEEeC--CCCEEEEeCCCCEEEe
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-QVLAIGTA--RGNLTVYNHMTSKRVP 75 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-~~las~s~--d~~v~iwd~~~~~~~~ 75 (89)
..++..|+....+..-+.-|-+++||+.+|..+..- +|.. ..|+++.. .+.+..-| +.|++..
T Consensus 261 Pvamqvs~kygviyviTK~G~i~lyDleTgt~i~~n-----rIs~~~iF~t~~~~~~~Gi~~Vn-r~GqVl~ 326 (494)
T 1bpo_A 261 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN-----RISGETIFVTAPHEATAGIIGVN-RKGQVLS 326 (494)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEEETTTTEEEEEE-TTCEEEE
T ss_pred eeEEEecccCCEEEEEecCceEEEEecccceeeeee-----cccCCceEEecccCCCCcEEEEc-cCceEEE
Confidence 567888888888889999999999999999875432 2333 44444432 23444444 4455544
No 316
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=45.93 E-value=87 Score=23.07 Aligned_cols=68 Identities=10% Similarity=0.131 Sum_probs=36.1
Q ss_pred cEEEEEEccCCC-EEEEEeCCCcEEEEeCCCC----eEeeEecCC---cceee-c----cEEEEEeCCCCEEEEeCCCCE
Q psy12376 6 YIFLLQTSQVGQ-VLAIGTARGNLTVYNHMTS----KRVPVLGKH---TNTIV-G----QVLAIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 6 ~i~~~~~spdg~-~la~g~~~g~v~iwd~~~~----~~~~~~~~h---~~~i~-~----~~las~s~d~~v~iwd~~~~~ 72 (89)
.+..|+|++... .+.+-...+.|+.+++... .....+... ...|. . +++++-...+.|.+.++....
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~ 504 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 504 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe
Confidence 467889998544 4455555678888887642 112222211 11111 1 456666667777777776443
Q ss_pred E
Q psy12376 73 R 73 (89)
Q Consensus 73 ~ 73 (89)
+
T Consensus 505 ~ 505 (791)
T 3m0c_C 505 R 505 (791)
T ss_dssp E
T ss_pred E
Confidence 3
No 317
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=45.17 E-value=49 Score=22.44 Aligned_cols=23 Identities=17% Similarity=0.190 Sum_probs=12.6
Q ss_pred cEEEEEEccCCC-EEEEEeCCCcE
Q psy12376 6 YIFLLQTSQVGQ-VLAIGTARGNL 28 (89)
Q Consensus 6 ~i~~~~~spdg~-~la~g~~~g~v 28 (89)
.+..|++.|||. ++++-+..|.+
T Consensus 406 R~~dv~~gpDG~~Lyv~~d~~G~i 429 (454)
T 1cru_A 406 RYRDVIASPDGNVLYVLTDTAGNV 429 (454)
T ss_dssp CEEEEEECTTSSCEEEEECSSCCE
T ss_pred CceeEEECCCCCEEEEEECCCCCC
Confidence 456666777765 44444444443
No 318
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=44.99 E-value=44 Score=23.99 Aligned_cols=68 Identities=12% Similarity=0.073 Sum_probs=38.3
Q ss_pred EEEEEEccCCCEEEEE-eCCCcEEEEeCCC----CeEeeEecC-----Ccceee-c--cEEEEEeCCCCEEEEeCCCCEE
Q psy12376 7 IFLLQTSQVGQVLAIG-TARGNLTVYNHMT----SKRVPVLGK-----HTNTIV-G--QVLAIGTARGNLTVYNHMTSKR 73 (89)
Q Consensus 7 i~~~~~spdg~~la~g-~~~g~v~iwd~~~----~~~~~~~~~-----h~~~i~-~--~~las~s~d~~v~iwd~~~~~~ 73 (89)
+..++|++.+..|... ...+.|+.+++.+ ......+.. +.-.+. . +++++-...+.|.+.++.....
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~ 487 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 487 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCE
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCce
Confidence 5678999876665554 4467899998764 221111111 111111 1 4555556677888888865444
Q ss_pred E
Q psy12376 74 V 74 (89)
Q Consensus 74 ~ 74 (89)
.
T Consensus 488 ~ 488 (699)
T 1n7d_A 488 K 488 (699)
T ss_dssp E
T ss_pred E
Confidence 3
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=43.89 E-value=56 Score=20.23 Aligned_cols=61 Identities=15% Similarity=0.159 Sum_probs=36.4
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEeeE--ec----CCcceeec-cEEEEEeCC-----CCEEEEeCCCCEEEe
Q psy12376 15 VGQVLAIGTAR-----GNLTVYNHMTSKRVPV--LG----KHTNTIVG-QVLAIGTAR-----GNLTVYNHMTSKRVP 75 (89)
Q Consensus 15 dg~~la~g~~~-----g~v~iwd~~~~~~~~~--~~----~h~~~i~~-~~las~s~d-----~~v~iwd~~~~~~~~ 75 (89)
+++.++.|+.+ ..+.+||..+.+-... +. .|...+.. ++++.|+.+ ..+.+||+++++-..
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 56677777654 4689999887653221 11 11111111 677777654 468899998876544
No 320
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=43.09 E-value=37 Score=20.76 Aligned_cols=33 Identities=9% Similarity=0.188 Sum_probs=24.0
Q ss_pred cEEEEEEccCC-CEEEEEeCCCcEEEEeCCCCeE
Q psy12376 6 YIFLLQTSQVG-QVLAIGTARGNLTVYNHMTSKR 38 (89)
Q Consensus 6 ~i~~~~~spdg-~~la~g~~~g~v~iwd~~~~~~ 38 (89)
.+.++-|...+ .-++..+.+|++.+||..-|+.
T Consensus 120 hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF 153 (188)
T 1ukf_A 120 HLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEF 153 (188)
T ss_dssp EEEEEEETTTEEEEEEEEEETTEEEEEETTTEEE
T ss_pred eEEEEEecCCCceeEEeccCCCeEEEeCCCCcee
Confidence 35667777643 3667777788999999988764
No 321
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=37.02 E-value=46 Score=24.18 Aligned_cols=34 Identities=9% Similarity=-0.114 Sum_probs=24.8
Q ss_pred EEEEE-EccCCCEEEEEeC-----CCcEEEEeCCCCeEee
Q psy12376 7 IFLLQ-TSQVGQVLAIGTA-----RGNLTVYNHMTSKRVP 40 (89)
Q Consensus 7 i~~~~-~spdg~~la~g~~-----~g~v~iwd~~~~~~~~ 40 (89)
+..+. ++||++.++.+-. ...++++|+.+++.+.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~ 170 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK 170 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC
Confidence 34566 8999998776533 3389999999988653
No 322
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=35.87 E-value=69 Score=18.99 Aligned_cols=31 Identities=13% Similarity=-0.044 Sum_probs=20.4
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCe
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSK 37 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~ 37 (89)
+.-+.|+|+|.+.|.+...|...=.|...++
T Consensus 112 lEp~eF~p~~~w~a~~~esG~f~dvDLse~e 142 (164)
T 1zso_A 112 IELIDFFPSNNFIVEDTKGKLYYDVNLSDQN 142 (164)
T ss_dssp EEEEEECCCSCEEEEETTSCEEEEECCTTSC
T ss_pred eeeEEEecCCcEEEEECCCCcEEeeecCCCc
Confidence 4567888988888888777733334555443
No 323
>2pag_A Hypothetical protein; nysgx, target 10412I, novel fold, structural genomics, PSI-2 structure initiative; 1.60A {Pseudomonas syringae PV} SCOP: d.369.1.1
Probab=35.22 E-value=37 Score=19.19 Aligned_cols=29 Identities=3% Similarity=0.119 Sum_probs=16.6
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTS 36 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~ 36 (89)
.+.-++ .+.|.+++.- .+|.|..|+-..+
T Consensus 86 ~~ipf~-~~~Gn~iCid-~~g~Vv~wdhe~~ 114 (135)
T 2pag_A 86 ELIPIC-QDGEDYYCVE-EDGTVLLWSAEEE 114 (135)
T ss_dssp TSEEEE-EETTEEEEEC-TTSCEEEECC---
T ss_pred CeEEEE-ECCCCEEEEC-CCCEEEEEEccCC
Confidence 344445 5566666555 7788888876544
No 324
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=34.93 E-value=27 Score=19.71 Aligned_cols=13 Identities=23% Similarity=0.322 Sum_probs=9.4
Q ss_pred EEEEccCCCEEEE
Q psy12376 9 LLQTSQVGQVLAI 21 (89)
Q Consensus 9 ~~~~spdg~~la~ 21 (89)
.|.|+|+|.-+++
T Consensus 36 iI~W~~~G~sFvV 48 (125)
T 2ldu_A 36 LICWSPSGNSFHV 48 (125)
T ss_dssp TEEECTTSSEEEE
T ss_pred EEEEcCCCCEEEE
Confidence 4789999875543
No 325
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=32.46 E-value=1.3e+02 Score=21.28 Aligned_cols=66 Identities=8% Similarity=-0.107 Sum_probs=38.5
Q ss_pred cEEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEeeEecCC---cceeec-----cEEEEEeCCCCEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVL-AIGTARGNLTVYNHMTSKRVPVLGKH---TNTIVG-----QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 6 ~i~~~~~spdg~~l-a~g~~~g~v~iwd~~~~~~~~~~~~h---~~~i~~-----~~las~s~d~~v~iwd~~~~ 71 (89)
....++|++.+..| .+-..++.|..++.........+... ...+.. +++.+-...+.|.+.++...
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence 46789999965554 45556789999988654332222211 111111 45555566677777777543
No 326
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=32.12 E-value=42 Score=24.17 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=14.5
Q ss_pred CcEEEEEEccCCCEEEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIG 22 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g 22 (89)
.+++.++||||++.|.+.
T Consensus 531 aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 531 CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEEECTTSSEEEEE
T ss_pred ccccCCEECCCCCEEEEE
Confidence 358999999999877654
No 327
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=30.15 E-value=59 Score=22.61 Aligned_cols=26 Identities=27% Similarity=0.245 Sum_probs=21.7
Q ss_pred CcEEEEEEccCCCEEEEEeCCCcEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIGTARGNLTV 30 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g~~~g~v~i 30 (89)
.+|..|.+++++.+|.+++.++.++|
T Consensus 462 ~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 462 TTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CccceEEEcCCCCEEEEEECCeEEEE
Confidence 46888999999999999988877665
No 328
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=29.25 E-value=1.3e+02 Score=20.09 Aligned_cols=36 Identities=8% Similarity=-0.113 Sum_probs=24.2
Q ss_pred EEEEEEccC--CCEEEEEeCCCcEEEEeCCCCeEeeEe
Q psy12376 7 IFLLQTSQV--GQVLAIGTARGNLTVYNHMTSKRVPVL 42 (89)
Q Consensus 7 i~~~~~spd--g~~la~g~~~g~v~iwd~~~~~~~~~~ 42 (89)
...++|+|+ ...|..+...+.|+.+|..+++.....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~ 178 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT 178 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee
Confidence 568999995 334444433389999999887654443
No 329
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=28.73 E-value=51 Score=23.57 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=14.5
Q ss_pred CcEEEEEEccCCCEEEEE
Q psy12376 5 YYIFLLQTSQVGQVLAIG 22 (89)
Q Consensus 5 ~~i~~~~~spdg~~la~g 22 (89)
.+++.++|+||++.|.+.
T Consensus 531 aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEEECTTSSEEEEE
T ss_pred ccCcCeeECCCCCEEEEE
Confidence 468999999999876554
No 330
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=28.52 E-value=65 Score=26.20 Aligned_cols=71 Identities=11% Similarity=0.188 Sum_probs=44.0
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec------cEEEEEeCCCCEEEEeCCC-CEEEeeeCCCC
Q psy12376 9 LLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG------QVLAIGTARGNLTVYNHMT-SKRVPVLGKHT 81 (89)
Q Consensus 9 ~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~------~~las~s~d~~v~iwd~~~-~~~~~~l~~h~ 81 (89)
+.-.+|..+.+|.-+ ...+.|||+.+...+....-. ..|.. +.|+-. .+..|+-|++.+ ....+.+.+|.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecCCCeeEEE-cCCeEEEeccCCCCccHHHHhcch
Confidence 344678778888775 569999999876555443322 22332 666666 355699999964 23334455554
Q ss_pred C
Q psy12376 82 K 82 (89)
Q Consensus 82 ~ 82 (89)
.
T Consensus 147 ~ 147 (1630)
T 1xi4_A 147 S 147 (1630)
T ss_pred h
Confidence 3
No 331
>1s28_A ORF1; type III chaperone; 3.00A {Pseudomonas syringae PV} SCOP: d.198.1.1
Probab=27.64 E-value=91 Score=17.85 Aligned_cols=29 Identities=0% Similarity=-0.137 Sum_probs=21.9
Q ss_pred CcCCcEEEEEEccCCCEEEEEeCCCcEEEE
Q psy12376 2 NLRYYIFLLQTSQVGQVLAIGTARGNLTVY 31 (89)
Q Consensus 2 ~~~~~i~~~~~spdg~~la~g~~~g~v~iw 31 (89)
+|.++|+|+.|. +=..=+.++..+-|++-
T Consensus 27 khe~eVYcf~F~-~i~i~iy~d~~rwvyf~ 55 (132)
T 1s28_A 27 KHEHEVYCFEFK-EVSIRIYQDKFKWVYFL 55 (132)
T ss_dssp CSTTCCEEEEEG-GGTEEEEECTTSEEEEE
T ss_pred cccCceEEEEEC-CEEEEEeecCCcEEEEE
Confidence 367889999998 66666777777776664
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=27.61 E-value=1.2e+02 Score=19.07 Aligned_cols=15 Identities=13% Similarity=0.020 Sum_probs=11.6
Q ss_pred CCEEEEeCCCCEEEe
Q psy12376 61 GNLTVYNHMTSKRVP 75 (89)
Q Consensus 61 ~~v~iwd~~~~~~~~ 75 (89)
..+.+||..+++-..
T Consensus 168 ~~v~~yd~~~~~W~~ 182 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSY 182 (357)
T ss_dssp CEEEEEETTTTEEEE
T ss_pred ccEEEEeCCCCcEEE
Confidence 579999998776544
No 333
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=27.47 E-value=71 Score=23.25 Aligned_cols=27 Identities=26% Similarity=0.225 Sum_probs=22.5
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTV 30 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~i 30 (89)
..+|..|.+++++++|.+++.++.++|
T Consensus 469 ~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 469 PTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 345788999999999999998887776
No 334
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=26.77 E-value=1.2e+02 Score=18.80 Aligned_cols=60 Identities=13% Similarity=0.066 Sum_probs=39.3
Q ss_pred EEEE-EeCCCcEEEEeCCCCeEeeEecCCcceeec-------cEEEEEeCCCCEEEEeCCCCEEEeee
Q psy12376 18 VLAI-GTARGNLTVYNHMTSKRVPVLGKHTNTIVG-------QVLAIGTARGNLTVYNHMTSKRVPVL 77 (89)
Q Consensus 18 ~la~-g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-------~~las~s~d~~v~iwd~~~~~~~~~l 77 (89)
.... ...+|.|.+-+..++.++..+..-.....| .+=+.-+.+|.|.|-++.+++++...
T Consensus 99 W~i~~~~p~G~VqFvN~~TgtCL~ay~nGvv~~~C~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~ 166 (206)
T 1sr4_A 99 WKMEPGKHREYFRFVNQSLGTCVEAYGNGLIHDICSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYN 166 (206)
T ss_dssp EEEEECSSTTCEEEEETTTCCEEEEETTEEEEECCCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEEC
T ss_pred eEEEeecCCCEEEEEECCCCceeeeccCCeEEecCCCCCcccEEEEecCCCccEEEEECCCCccCCcc
Confidence 4444 566888999999888887765431111123 22233356888999999999998863
No 335
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=24.72 E-value=80 Score=17.56 Aligned_cols=18 Identities=11% Similarity=0.124 Sum_probs=15.3
Q ss_pred cEEEEeCCCCeEeeEecC
Q psy12376 27 NLTVYNHMTSKRVPVLGK 44 (89)
Q Consensus 27 ~v~iwd~~~~~~~~~~~~ 44 (89)
.|.|.|..+|+.++.+.+
T Consensus 70 vVkVvD~~TgEVIRqIPp 87 (117)
T 2hc5_A 70 YVKVIEDSTNEVIREIPP 87 (117)
T ss_dssp EEEEEETTTTEEEEEECH
T ss_pred EEEEEECCCCcEEEeCCh
Confidence 578999999999998764
No 336
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=24.71 E-value=1.6e+02 Score=19.65 Aligned_cols=74 Identities=12% Similarity=0.121 Sum_probs=48.1
Q ss_pred CCcEEEEEEccCCCEEEEEeCCCcEEEEeCC-----CCeEeeEec-CCcc------eee-c----c-EEEEEeCCCCEEE
Q psy12376 4 RYYIFLLQTSQVGQVLAIGTARGNLTVYNHM-----TSKRVPVLG-KHTN------TIV-G----Q-VLAIGTARGNLTV 65 (89)
Q Consensus 4 ~~~i~~~~~spdg~~la~g~~~g~v~iwd~~-----~~~~~~~~~-~h~~------~i~-~----~-~las~s~d~~v~i 65 (89)
...+..|...+...+|.++-.+..|-.++.+ +++.+..+. ++-. .|. . . +|+|+-.+.++.+
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~V 258 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAI 258 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEE
T ss_pred CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEE
Confidence 4567889999988899999998778777855 345555442 2111 121 1 2 4555547789999
Q ss_pred EeCC-CCEEEeee
Q psy12376 66 YNHM-TSKRVPVL 77 (89)
Q Consensus 66 wd~~-~~~~~~~l 77 (89)
||.+ +.+.+..+
T Consensus 259 ydr~~~~~~vg~f 271 (355)
T 3amr_A 259 YDRQGKNKYVADF 271 (355)
T ss_dssp EESSTTCCEEEEE
T ss_pred EECCCCCcEEEEE
Confidence 9996 55555444
No 337
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=23.63 E-value=2e+02 Score=20.34 Aligned_cols=66 Identities=9% Similarity=-0.043 Sum_probs=36.6
Q ss_pred cEEEEEEccCCCEE-EEEeCCCcEEEEeCCCCeEeeEecC---Ccc--eeec---cEEEEEeCCCCEEEEeCCCC
Q psy12376 6 YIFLLQTSQVGQVL-AIGTARGNLTVYNHMTSKRVPVLGK---HTN--TIVG---QVLAIGTARGNLTVYNHMTS 71 (89)
Q Consensus 6 ~i~~~~~spdg~~l-a~g~~~g~v~iwd~~~~~~~~~~~~---h~~--~i~~---~~las~s~d~~v~iwd~~~~ 71 (89)
.+..++|.+.+..| .+-...+.|..++.........+.. +.. .+.- +++.+-+..+.|.+-++...
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC
Confidence 36789999855544 4445577888888865332222221 111 1110 45555556667777776543
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=23.27 E-value=2.1e+02 Score=20.47 Aligned_cols=61 Identities=20% Similarity=0.252 Sum_probs=37.6
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCeEee--Ee----cCCcceee-c-cEEEEEeCCC--CEEEEeCCCCEEEe
Q psy12376 15 VGQVLAIGTAR------GNLTVYNHMTSKRVP--VL----GKHTNTIV-G-QVLAIGTARG--NLTVYNHMTSKRVP 75 (89)
Q Consensus 15 dg~~la~g~~~------g~v~iwd~~~~~~~~--~~----~~h~~~i~-~-~~las~s~d~--~v~iwd~~~~~~~~ 75 (89)
+++.++.|+.+ ..+.+||..+.+-.. .+ ..|...+. . ++++.||.++ .+.+||..++....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~ 527 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKD 527 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEE
Confidence 66777777643 357888887754321 11 12333332 2 6777777655 79999998877654
No 339
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=23.19 E-value=20 Score=19.51 Aligned_cols=12 Identities=25% Similarity=0.318 Sum_probs=8.3
Q ss_pred EEEEccCCCEEE
Q psy12376 9 LLQTSQVGQVLA 20 (89)
Q Consensus 9 ~~~~spdg~~la 20 (89)
.+.|+|+|..++
T Consensus 23 iI~W~~~G~sFv 34 (106)
T 1hks_A 23 LICWTKDGQSFV 34 (106)
T ss_dssp TSEESTTTSCEE
T ss_pred EEEEeCCCCEEE
Confidence 478999885433
No 340
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=21.52 E-value=22 Score=24.96 Aligned_cols=18 Identities=17% Similarity=0.253 Sum_probs=11.0
Q ss_pred EEEeCCCCEEEEeCCCCE
Q psy12376 55 AIGTARGNLTVYNHMTSK 72 (89)
Q Consensus 55 as~s~d~~v~iwd~~~~~ 72 (89)
..+..+|-|+|||+++..
T Consensus 161 ~~~~~~GVVrvWDVkd~s 178 (577)
T 3mwp_A 161 ARAGRDGVVRVWDVKNAE 178 (577)
T ss_dssp -----CCEECSEECSCGG
T ss_pred CCCCCCCeEEEEecCCHH
Confidence 357789999999997654
No 341
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=21.21 E-value=2.5e+02 Score=20.67 Aligned_cols=65 Identities=5% Similarity=-0.027 Sum_probs=34.2
Q ss_pred cEEEEEEccCCCEEEEEe-CC-CcEEEEeCCCCeEeeEecCC---cceee-c----cEEEEEeCCCCEEEEeCCC
Q psy12376 6 YIFLLQTSQVGQVLAIGT-AR-GNLTVYNHMTSKRVPVLGKH---TNTIV-G----QVLAIGTARGNLTVYNHMT 70 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~-~~-g~v~iwd~~~~~~~~~~~~h---~~~i~-~----~~las~s~d~~v~iwd~~~ 70 (89)
....|++.|.+..|.... .. +.|.+.++........+... ...|. . .++++=.....|...|+..
T Consensus 515 ~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 367899999755554443 33 67888888654332222211 11111 1 3334434455677777653
No 342
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=21.03 E-value=2.2e+02 Score=19.83 Aligned_cols=64 Identities=6% Similarity=0.057 Sum_probs=37.7
Q ss_pred cEEEEEE-------ccCCCEEEEEeCCC-------cEEEEeCCC-CeE--------eeEec-CCcceeec---cEEEEEe
Q psy12376 6 YIFLLQT-------SQVGQVLAIGTARG-------NLTVYNHMT-SKR--------VPVLG-KHTNTIVG---QVLAIGT 58 (89)
Q Consensus 6 ~i~~~~~-------spdg~~la~g~~~g-------~v~iwd~~~-~~~--------~~~~~-~h~~~i~~---~~las~s 58 (89)
....++| +++|.+|.+....+ .|.+++... |+. +..+. .+.-.+.. .++++-.
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~ 266 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSY 266 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEET
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEEC
Confidence 4789999 99999666665544 377776443 222 22222 11111211 4566666
Q ss_pred CCCCEEEEeCC
Q psy12376 59 ARGNLTVYNHM 69 (89)
Q Consensus 59 ~d~~v~iwd~~ 69 (89)
.++.|+.+|+.
T Consensus 267 ~~g~V~r~d~~ 277 (496)
T 3kya_A 267 EKGQVFRLDLV 277 (496)
T ss_dssp TTTEEEEECHH
T ss_pred CCCEEEEEecc
Confidence 77778888876
No 343
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=20.80 E-value=2.3e+02 Score=20.07 Aligned_cols=66 Identities=20% Similarity=0.217 Sum_probs=37.7
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEeeEecCCcceeec-----cEEEEEeCCCCEEEEeCCCCEEE
Q psy12376 6 YIFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRVPVLGKHTNTIVG-----QVLAIGTARGNLTVYNHMTSKRV 74 (89)
Q Consensus 6 ~i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~~~~~~h~~~i~~-----~~las~s~d~~v~iwd~~~~~~~ 74 (89)
.|.++.-..+| .|-+|+.+| +.+||..+.+...........|.+ ..|-.++.+ .|..+|..+++..
T Consensus 64 ~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 64 RIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLT 134 (758)
T ss_dssp CEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEE
T ss_pred eEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEE
Confidence 47888777776 556666655 789998876542211111112322 344445555 5888887665543
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=20.58 E-value=3.2e+02 Score=22.46 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=27.2
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEeCCCCeEe
Q psy12376 7 IFLLQTSQVGQVLAIGTARGNLTVYNHMTSKRV 39 (89)
Q Consensus 7 i~~~~~spdg~~la~g~~~g~v~iwd~~~~~~~ 39 (89)
..++..|+....+..-+.-|-+.++|+.+|..+
T Consensus 261 pv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 261 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred ceEEEeccccCEEEEEecCceEEEEecccchhh
Confidence 456777887778888899999999999998764
No 345
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=20.50 E-value=1.7e+02 Score=18.49 Aligned_cols=66 Identities=12% Similarity=0.066 Sum_probs=36.4
Q ss_pred EEEccCCCEEEEEe----CCCcEEEEeCCCCeEeeEecCCcc-eeec--cEEE-EEeCCCCEEEEeCCCCEEEee
Q psy12376 10 LQTSQVGQVLAIGT----ARGNLTVYNHMTSKRVPVLGKHTN-TIVG--QVLA-IGTARGNLTVYNHMTSKRVPV 76 (89)
Q Consensus 10 ~~~spdg~~la~g~----~~g~v~iwd~~~~~~~~~~~~h~~-~i~~--~~la-s~s~d~~v~iwd~~~~~~~~~ 76 (89)
..|+|+|++|+-.. .+..|...++... ....+..+.. ++.- +.|. +......|+.-++..+.....
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYLFTCNTSDRYFYYNNPKNGQLYRYDTASQSEALF 182 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCCCCSEEETTEEEEECTTTCCEEEEETTTTEEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCceEeeEECCEEEEEeCCCceEEEEECCCCCEEEE
Confidence 47889999888765 3446666666543 3333433322 1111 3344 433467788888766654443
Done!