Query psy12377
Match_columns 194
No_of_seqs 117 out of 369
Neff 6.1
Searched_HMMs 46136
Date Fri Aug 16 17:35:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12377.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12377hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 smart00539 NIDO Extracellular 100.0 1.1E-42 2.5E-47 278.4 15.6 141 15-163 3-151 (152)
2 PF06119 NIDO: Nidogen-like; 100.0 1.6E-29 3.5E-34 186.1 9.1 88 71-162 1-90 (90)
3 KOG4291|consensus 100.0 4.1E-29 8.8E-34 246.2 12.6 183 3-192 199-392 (1043)
4 KOG1214|consensus 99.6 1.8E-15 3.9E-20 145.2 10.2 132 22-163 115-267 (1289)
5 PF03782 AMOP: AMOP domain; I 94.0 0.0039 8.4E-08 50.1 -3.4 70 9-79 3-72 (151)
6 KOG3848|consensus 81.0 2.2 4.8E-05 39.7 4.2 60 52-122 215-274 (516)
7 smart00723 AMOP Adhesion-assoc 79.7 0.16 3.4E-06 41.0 -3.2 69 10-79 7-78 (154)
8 PF07507 WavE: WavE lipopolysa 30.2 1.1E+02 0.0024 27.3 5.2 49 31-85 16-65 (311)
9 PF05980 Toxin_7: Toxin 7; In 23.5 41 0.00089 20.5 0.8 12 9-20 6-17 (34)
10 PF01630 Glyco_hydro_56: Hyalu 20.8 87 0.0019 28.4 2.7 27 36-62 83-113 (337)
No 1
>smart00539 NIDO Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins.
Probab=100.00 E-value=1.1e-42 Score=278.44 Aligned_cols=141 Identities=35% Similarity=0.520 Sum_probs=126.3
Q ss_pred CCCCCCc-cccEEEEeecCChhHHHHHHHHHhhcCCCC-------cceEeccccccCCCCCCccCceeeEEEEecCCceE
Q psy12377 15 TMLPRIK-VGDMFINYISQCPCTLEQALADKGRFLPDY-------DCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSY 86 (194)
Q Consensus 15 w~d~~~~-~G~VyYre~~~~p~vL~rAt~dI~~~fp~~-------~fvvTW~~V~~y~~~~~~~~NTFQaVLitdg~~Sf 86 (194)
|.|++.+ .|+||||| ++|+.+|.||+++||++||+. .|||||++|++|+.....++||||+||++||..||
T Consensus 3 ~~d~d~~~~G~V~yre-~~d~~~L~ra~~~v~~~f~~~~~F~a~~v~vvTW~~V~~~~~~~~~~~NTFQ~VL~tdg~~sf 81 (152)
T smart00539 3 WADADTEGTGKVYYRE-TTDHAILDRATESVREGFTDMGGFRAKSVVIVTWENVAAYGSQSSDGTNTFQAVLATDGSRTY 81 (152)
T ss_pred ccccCCCCCCCEEEEE-eCCHHHHHHHHHHHHHHCCCCcCcceeEEEEEECcCcccccccCCCCCceeEEEEEECCCceE
Confidence 8888874 79999999 799999999999999999983 46999999999985544479999999999999999
Q ss_pred EEEEcCccceecccccCCCCCCCCCCcceEEEEeecCCceeEEEecCCCcchhhhhhccCCCCCCCceEEEEecCce
Q psy12377 87 AIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRIDENI 163 (194)
Q Consensus 87 alF~Y~~iqW~~~~~~~~~~~~g~~g~~A~aGf~~Gdg~~~~~~lp~S~t~~v~~l~~~SN~~g~~G~W~frid~~~ 163 (194)
|+|+|++|+|..+..+++. .+.+|||||++||+..+|. ||+|+++++++|...|| +|+||+|+||||+..
T Consensus 82 a~f~Y~~~~~~~~~~~~~~-----~~~~a~aGF~~Gdg~~~~~-lp~S~~~~~~~L~~~sN-~g~~G~w~frid~~~ 151 (152)
T smart00539 82 AIFLYPSLGWTSDTTAGGD-----DGVRARAGFNGGDGTFSYT-LPASGEENIKNLAEGSN-VGIPGRWMFRVDGAE 151 (152)
T ss_pred EEEEecCCCceeecccCCC-----CCcceeEEEeccCCceeEE-CCCCCCcchhhhhhcCC-CCCceEEEEEeCCcc
Confidence 9999999988887666543 2789999999999988886 99999999999999998 999999999999874
No 2
>PF06119 NIDO: Nidogen-like; InterPro: IPR003886 The ~180-residue NIDO domain is an extracellular domain of unknown function, found in nidogen (entactin) and hypothetical proteins. The NIDO domain is found in association with other domains, such as nidogen G2 beta-barrel (IPR006605 from INTERPRO), thyroglobulin type-1 (IPR000716 from INTERPRO), LDLRB (IPR000033 from INTERPRO), AMOP (IPR005533 from INTERPRO), EGF-like (IPR000742 from INTERPRO), VWFD, IPT/TIG, or sushi/CCP/SCR (IPR000436 from INTERPRO) [, , , ]. Some proteins known to contain a NIDO domain are listed below: Vertebrate nidogen-1 (NID-1) or entactin, a sulphated glycoprotein widely distributed in basement membranes. Vertebrate nidogen-2 (NID-2) or osteonidogen, a cell adhesion glycoprotein which is widely distributed in basement membranes. Vertebrate alpha-tectorin. Mammalian mucin-4 (MUC4), a highly glycosylated membrane-bound protein. Xenopus ID14, a putative matrix protein. ; GO: 0007160 cell-matrix adhesion
Probab=99.96 E-value=1.6e-29 Score=186.15 Aligned_cols=88 Identities=55% Similarity=0.895 Sum_probs=80.7
Q ss_pred CceeeEEEEecCCceEEEEEcCc--cceecccccCCCCCCCCCCcceEEEEeecCCceeEEEecCCCcchhhhhhccCCC
Q psy12377 71 TNTFQLVLATDEVYSYAIFNYAE--IQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWA 148 (194)
Q Consensus 71 ~NTFQaVLitdg~~SfalF~Y~~--iqW~~~~~~~~~~~~g~~g~~A~aGf~~Gdg~~~~~~lp~S~t~~v~~l~~~SN~ 148 (194)
+|||||||+||+..|||+|+|++ |+|++....++ .+++++.+|+|||++||+..+|. +|+|+++++.+|...||
T Consensus 1 tNTFQ~VL~tdg~~Sfalf~Y~~~gi~W~~~~~~~~--~~~~~~~~a~aGf~~gd~~~~~~-lp~s~t~~i~~l~~~sN- 76 (90)
T PF06119_consen 1 TNTFQAVLATDGSRSFALFNYPDGGIQWTTGDAGGG--YNGLGGVPAQAGFNSGDGTNYYN-LPGSGTDSIRNLDNSSN- 76 (90)
T ss_pred CeEEEEEEEECCCceEEEEEeCCCCEeeEecccccc--cccceeeeeEEEEecCCCcceEE-ecCCCccceeehhhcCC-
Confidence 69999999999999999999998 99999876333 46788999999999999998997 99999999999999998
Q ss_pred CCCCceEEEEecCc
Q psy12377 149 NGFPGRHIFRIDEN 162 (194)
Q Consensus 149 ~g~~G~W~frid~~ 162 (194)
+|+||+|+||||++
T Consensus 77 ~g~~G~wifrid~~ 90 (90)
T PF06119_consen 77 VGVPGRWIFRIDSE 90 (90)
T ss_pred CCCCEEEEEEeCCC
Confidence 99999999999974
No 3
>KOG4291|consensus
Probab=99.96 E-value=4.1e-29 Score=246.20 Aligned_cols=183 Identities=32% Similarity=0.451 Sum_probs=159.8
Q ss_pred cccccccccCCCCCCCCCc-cccEEE-EeecCChhHHHHHHHHHhhcCCCC-------cceEecc-ccccCCCCCCccCc
Q psy12377 3 QTSSFTNNTCSSTMLPRIK-VGDMFI-NYISQCPCTLEQALADKGRFLPDY-------DCDIDLN-PNCFYNKGARHCTN 72 (194)
Q Consensus 3 ~~~~~~~~~~~~w~d~~~~-~G~VyY-re~~~~p~vL~rAt~dI~~~fp~~-------~fvvTW~-~V~~y~~~~~~~~N 72 (194)
|+.+|+ |+-|.++.-+ +|.||| ++ .+++.+|.|.+.|||+++.++ .|||||+ .+..+.......+|
T Consensus 199 ~~~~f~---~~f~~~~~~~~pG~i~~~~d-~~~~~~l~~~~~dire~~~~a~tF~a~~a~IvTW~~a~~~~~~s~~~~~n 274 (1043)
T KOG4291|consen 199 YSTAFF---APFWSKVCPGTPGVIYYRCD-SDDDGVLDRITRDIREGVAGAATFRAFHALIVTWYRAASFRGNSDAENPN 274 (1043)
T ss_pred cCcccc---ccccccccCCCCceEEeecc-cccHHHHHHHHHHHHHhhccccccCcceEEEEEhhhhhhhccccccCCCC
Confidence 444554 4556655554 799999 66 899999999999999999775 5699999 56666655667899
Q ss_pred eeeEEEEecCCceEEEEEcCccceeccc-ccCCCCCCCCCCcceEEEEeecCCceeEEEecCCCcchhhhhhccCCCCCC
Q psy12377 73 TFQLVLATDEVYSYAIFNYAEIQWTSHT-EAGGDTTGGEGGVPAYVGFNAGNGTRSYEYYPYSQRSTIRDLVGRGWANGF 151 (194)
Q Consensus 73 TFQaVLitdg~~SfalF~Y~~iqW~~~~-~~~~~~~~g~~g~~A~aGf~~Gdg~~~~~~lp~S~t~~v~~l~~~SN~~g~ 151 (194)
|||+||++|+..+|++|+|..|+|+++. ..++++..|+++..|++||++|+++..|. +|+|+++.|.+|.+.+| +++
T Consensus 275 TfQ~vlvsD~~~Tfa~F~y~~l~wts~~~~~~g~~~~g~~~~~~qagfn~G~~t~~~~-~P~s~t~~i~~~~sg~~-v~~ 352 (1043)
T KOG4291|consen 275 TFQAVLVSDRIYTFAIFNYYYLNWTSGAVEFGGDGRAGRCGVSAQAGFNAGNGTVDFS-LPYSQTPNILALRSGTN-VGD 352 (1043)
T ss_pred cceeEEEecCcceeEEEeecCcccCCCcccccCCCcccceeeEEeeeecCCCcccccc-ccCCCCceeEecccccc-ccC
Confidence 9999999999999999999999999997 77777778899999999999999999998 89999999999998887 999
Q ss_pred CceEEEEecCceecCCccCCCCCCccceEEecCCceeEeEe
Q psy12377 152 PGRHIFRIDENIMLGTCNKDVASGWLPKIHRRFGGRCLIEI 192 (194)
Q Consensus 152 ~G~W~frid~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~~~ 192 (194)
||+||||+|+.++.++|.++. +.++|..++|..++|++++
T Consensus 353 PGr~~frvd~~~~~~~c~~~~-g~~~~~~~~p~~~n~~~g~ 392 (1043)
T KOG4291|consen 353 PGRWMFRVDEVVRSAGCTNDI-GGTYPMTCAPVCGNMLGGR 392 (1043)
T ss_pred CcccceecCCeecccccccCc-CCccceeecCCCCcccCCc
Confidence 999999999998887799887 8899999999999999876
No 4
>KOG1214|consensus
Probab=99.62 E-value=1.8e-15 Score=145.18 Aligned_cols=132 Identities=24% Similarity=0.321 Sum_probs=106.3
Q ss_pred cccEEEEeecCChhHHHHHHHHHhhcCCC-Ccc------eEeccccccCCCC-----CCccCceeeEEEEecCCceEEEE
Q psy12377 22 VGDMFINYISQCPCTLEQALADKGRFLPD-YDC------DIDLNPNCFYNKG-----ARHCTNTFQLVLATDEVYSYAIF 89 (194)
Q Consensus 22 ~G~VyYre~~~~p~vL~rAt~dI~~~fp~-~~f------vvTW~~V~~y~~~-----~~~~~NTFQaVLitdg~~SfalF 89 (194)
.|+|+||| ++.|....+|...|.+.||. +.| ++|| .|++|... ...+.|||||||+++++.|||||
T Consensus 115 ~~~~~~~e-~~sp~~~~~a~~~v~~~~~~~lrf~ys~~~v~t~-~~a~~q~p~~~~~~~g~~NtFQavlas~~s~syAlf 192 (1289)
T KOG1214|consen 115 DGEVHYRE-DTSPGNVHTAASKVPAGFPRPLRFLYSHAGVMTE-LVAAYQSPNRGALPSGELNTFQAVLASDGSDSYALF 192 (1289)
T ss_pred CceeEEec-cCCcchhhhhhhhhhccCCCceeeecccccceee-ecccccccccCccccccccceeeeeecCCCccEEEE
Confidence 57999999 99999999999999999985 344 7885 56666532 23589999999999999999999
Q ss_pred EcCc--cceecccccCCCCCCCCCCcceEEEEeecCCc-------eeEEEecCCCcchhhhhhccCCCCCCCceEEEEec
Q psy12377 90 NYAE--IQWTSHTEAGGDTTGGEGGVPAYVGFNAGNGT-------RSYEYYPYSQRSTIRDLVGRGWANGFPGRHIFRID 160 (194)
Q Consensus 90 ~Y~~--iqW~~~~~~~~~~~~g~~g~~A~aGf~~Gdg~-------~~~~~lp~S~t~~v~~l~~~SN~~g~~G~W~frid 160 (194)
+|+. ||+.+. +++.+ ...+||++||.+|... .|| .-.+.++.++||...|| .|++|+|+|.|+
T Consensus 193 lyp~~glqf~~t-fsk~~----~nq~pa~v~F~~G~~~dlaks~g~yf--~~~~~e~s~enl~~lsn-~g~~gVwvf~iG 264 (1289)
T KOG1214|consen 193 LYPANGLQFLGT-FSKES----YNQLPARVGFCRGEADDLAKSEGPYF--SLTSTEQSVENLYQLSN-LGIPGVWVFHIG 264 (1289)
T ss_pred EeccCCeEEEee-ccccc----cccccceeeeeccccccccccCcccc--cccchHHHHHHHhhhcc-cCCCCeEEEecC
Confidence 9984 998876 34443 2478999999998732 133 33566789999999998 999999999999
Q ss_pred Cce
Q psy12377 161 ENI 163 (194)
Q Consensus 161 ~~~ 163 (194)
+.+
T Consensus 265 s~~ 267 (1289)
T KOG1214|consen 265 STS 267 (1289)
T ss_pred Ccc
Confidence 875
No 5
>PF03782 AMOP: AMOP domain; InterPro: IPR005533 This domain may have a role in cell adhesion []. It is called the AMOP domain after Adhesion associated domain in MUC4 and Other Proteins. This domain is extracellular and contains a number of cysteines that probably form disulphide bridges.
Probab=93.98 E-value=0.0039 Score=50.15 Aligned_cols=70 Identities=37% Similarity=0.720 Sum_probs=52.9
Q ss_pred cccCCCCCCCCCccccEEEEeecCChhHHHHHHHHHhhcCCCCcceEeccccccCCCCCCccCceeeEEEE
Q psy12377 9 NNTCSSTMLPRIKVGDMFINYISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLA 79 (194)
Q Consensus 9 ~~~~~~w~d~~~~~G~VyYre~~~~p~vL~rAt~dI~~~fp~~~fvvTW~~V~~y~~~~~~~~NTFQaVLi 79 (194)
...|..|...+-.... |.+++.++|++|.+|..|+.||+|+...-..=+.++.|..++.+.+.+=+.+..
T Consensus 3 ~~~C~~W~~~~~~~~~-fl~~lp~CPCt~~Qa~~D~gRf~~~~~c~~~~~~~c~y~pGA~~Cvrs~~~~~~ 72 (151)
T PF03782_consen 3 RDWCEKWLNCDEQLPN-FLRDLPPCPCTLPQARADLGRFFPDPDCDMDRDSLCTYHPGAVHCVRSALSSQS 72 (151)
T ss_pred HHHHHHHHHcCchhhH-HHhhCCCCCCChHHhhhccCceeecccccCCCCccceecCCCceeeeccccccc
Confidence 4679999999944333 778889999999999999999999876544567788888776665555333433
No 6
>KOG3848|consensus
Probab=80.98 E-value=2.2 Score=39.72 Aligned_cols=60 Identities=18% Similarity=0.297 Sum_probs=39.7
Q ss_pred cceEeccccccCCCCCCccCceeeEEEEecCCceEEEEEcCccceecccccCCCCCCCCCCcceEEEEeec
Q psy12377 52 DCDIDLNPNCFYNKGARHCTNTFQLVLATDEVYSYAIFNYAEIQWTSHTEAGGDTTGGEGGVPAYVGFNAG 122 (194)
Q Consensus 52 ~fvvTW~~V~~y~~~~~~~~NTFQaVLitdg~~SfalF~Y~~iqW~~~~~~~~~~~~g~~g~~A~aGf~~G 122 (194)
.|+|-|++|.--+.. ....-|||+.|--||. ++|.|-++...-...++.+ .|..+|.+..
T Consensus 215 afvvqWdnV~Lqd~~-d~gsFTFqatL~~dGd---IVFaYkevP~~i~~Isd~n-------HPVKvGLSDA 274 (516)
T KOG3848|consen 215 AFVVQWDNVQLQDDK-DEGSFTFQATLHKDGD---IVFAYKEVPYDISNISDAN-------HPVKVGLSDA 274 (516)
T ss_pred EEEEEeeeEEeccCC-CCCcEEEEEEeccCCc---EEEEEeecccccccccccC-------Cceeecccce
Confidence 579999999876533 2356899999999997 4566655544333223222 3677887753
No 7
>smart00723 AMOP Adhesion-associated domain present in MUC4 and other proteins.
Probab=79.74 E-value=0.16 Score=41.04 Aligned_cols=69 Identities=39% Similarity=0.721 Sum_probs=53.0
Q ss_pred ccCCCCCCCCCccccEEEE---eecCChhHHHHHHHHHhhcCCCCcceEeccccccCCCCCCccCceeeEEEE
Q psy12377 10 NTCSSTMLPRIKVGDMFIN---YISQCPCTLEQALADKGRFLPDYDCDIDLNPNCFYNKGARHCTNTFQLVLA 79 (194)
Q Consensus 10 ~~~~~w~d~~~~~G~VyYr---e~~~~p~vL~rAt~dI~~~fp~~~fvvTW~~V~~y~~~~~~~~NTFQaVLi 79 (194)
..|.+|...+...=. |.+ ++.++|+.|.+|..|..||.|+......=..++.|..++.+.+-+-|++..
T Consensus 7 ~~C~~W~~~~~~~~n-fl~~~~~lp~CPCt~~qa~~D~gRF~~d~~c~~~~~~~c~yhpgA~~C~rS~~~~~s 78 (154)
T smart00723 7 DMCLRWLECDGQLPN-FLWDLEDLPSCPCSLPQAVADSGRFRPDDACDPDERILCTYHPGARHCIRSMQSVES 78 (154)
T ss_pred HHHHHHHHcchHHHH-HHHHhccCCCCCCchhhhhhccCceeecCCCCcccCcccccCCCcceeeeecccccc
Confidence 578888888876433 666 778999999999999988988875543334688998887777777776665
No 8
>PF07507 WavE: WavE lipopolysaccharide synthesis; InterPro: IPR011122 These proteins are encoded by putative wav gene clusters, which are responsible for the synthesis of the core oligosaccharide (OS) region of Vibrio cholerae lipopolysaccharide [].
Probab=30.22 E-value=1.1e+02 Score=27.31 Aligned_cols=49 Identities=16% Similarity=0.143 Sum_probs=34.3
Q ss_pred cCChhHHHHHHHHHhhcCCCCcceE-eccccccCCCCCCccCceeeEEEEecCCce
Q psy12377 31 SQCPCTLEQALADKGRFLPDYDCDI-DLNPNCFYNKGARHCTNTFQLVLATDEVYS 85 (194)
Q Consensus 31 ~~~p~vL~rAt~dI~~~fp~~~fvv-TW~~V~~y~~~~~~~~NTFQaVLitdg~~S 85 (194)
...+....++.+.+|++||.+..|+ ||+.-.. ....--|+|+..|....
T Consensus 16 ~~~~~~t~~~l~siR~~~P~A~IILSTW~~~d~------~~l~~D~vv~s~DPG~~ 65 (311)
T PF07507_consen 16 DQEPDITKNCLASIRKHFPGAEIILSTWEGQDI------SGLDYDQVVISDDPGSN 65 (311)
T ss_pred cccchhHHHHHHHHHHhCCCCEEEEECCCCCCc------ccCCcceEEecCCCCcc
Confidence 3556778899999999999997755 9997422 23344577777664443
No 9
>PF05980 Toxin_7: Toxin 7; InterPro: IPR009243 This family consists of several short spider neurotoxin proteins including many from the Funnel-web spider.; GO: 0009405 pathogenesis, 0005576 extracellular region; PDB: 2E2S_A 1EIT_A 1V91_A 1V90_A.
Probab=23.47 E-value=41 Score=20.47 Aligned_cols=12 Identities=33% Similarity=0.501 Sum_probs=8.2
Q ss_pred cccCCCCCCCCC
Q psy12377 9 NNTCSSTMLPRI 20 (194)
Q Consensus 9 ~~~~~~w~d~~~ 20 (194)
|+-|++|++++=
T Consensus 6 n~~C~~wagp~C 17 (34)
T PF05980_consen 6 NQFCADWAGPRC 17 (34)
T ss_dssp TSE-STTTSS-B
T ss_pred CCcchhhcCCcc
Confidence 688999998754
No 10
>PF01630 Glyco_hydro_56: Hyaluronidase; InterPro: IPR018155 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 56 GH56 from CAZY comprises enzymes with only one known activity; hyaluronidase 3.2.1.35 from EC. The venom of Apis mellifera (Honeybee) contains several biologically-active peptides and two enzymes, one of which is a hyaluronidase []. The amino acid sequence of bee venom hyaluronidase contains 349 amino acids, and includes four cysteines and a number of potential glycosylation sites []. The sequence shows a high degree of similarity to PH-20, a membrane protein of mammalian sperm involved in sperm-egg adhesion, supporting the view that hyaluronidases play a role in fertilisation []. PH-20 is required for sperm adhesion to the egg zona pellucida; it is located on both the sperm plasma membrane and acrosomal membrane []. The amino acid sequence of the mature protein contains 468 amino acids, and includes six potential N-linked glycosylation sites and twelve cysteines, eight of which are tightly clustered near the C terminus [].; GO: 0004415 hyalurononglucosaminidase activity, 0005975 carbohydrate metabolic process; PDB: 1FCQ_A 1FCV_A 1FCU_A 2J88_A 2PE4_A 2ATM_A.
Probab=20.77 E-value=87 Score=28.45 Aligned_cols=27 Identities=33% Similarity=0.364 Sum_probs=18.4
Q ss_pred HHHHHHHHHhhcCCCCcc----eEecccccc
Q psy12377 36 TLEQALADKGRFLPDYDC----DIDLNPNCF 62 (194)
Q Consensus 36 vL~rAt~dI~~~fp~~~f----vvTW~~V~~ 62 (194)
=|.+|.+||..+.|+.+| |+.||.-.|
T Consensus 83 HL~k~~~dI~~~ip~~~f~GLaVIDwE~WRP 113 (337)
T PF01630_consen 83 HLEKAKEDINEYIPDPDFSGLAVIDWEEWRP 113 (337)
T ss_dssp HHHHHHHHHHHHS--TT--SEEEEE--SS-S
T ss_pred HHHHHHHHHHHhCCCCCCCcceEEecccccc
Confidence 388999999999999877 999998654
Done!