BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12387
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004
OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2
Length = 358
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 1 MAQVITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCF-YYYFVKFLGPWFMKNR 59
MA ++ + ++ +Y+ + DPRT+DW S + P L +C Y Y VK LGP M+NR
Sbjct: 1 MALIMKYIDSMHHYM--DKYGDPRTKDWPLMSSPF-PTLALCLGYVYLVKVLGPRLMENR 57
Query: 60 QPYNLDTVLKVYNVFQILYSAFGVYIV 86
+P+ L L +YN Q+++SA+ Y +
Sbjct: 58 KPFQLRNTLILYNFVQVVFSAWLFYEI 84
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo
sapiens GN=ELOVL7 PE=1 SV=1
Length = 281
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 21 TDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSA 80
DPR DW S +L+ FY YFV LGP M+NR+P+ L + YN F +L+S
Sbjct: 21 ADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSV 80
Query: 81 FGVY 84
+ Y
Sbjct: 81 YMCY 84
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus
GN=ELOVL7 PE=2 SV=1
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 21 TDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSA 80
DPR DW S +++ FY YFV LGP M+NR+P+ L V+ YN +L+S
Sbjct: 21 ADPRVEDWLLMSSPLPQTIILGFYVYFVTSLGPKLMENRKPFELKKVMITYNFSIVLFSV 80
Query: 81 FGVY 84
+ Y
Sbjct: 81 YMFY 84
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus
norvegicus GN=Elovl7 PE=3 SV=1
Length = 281
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 21 TDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSA 80
DPR +W S +++ Y YFV LGP M+NR+P+ L + YN F +L+S
Sbjct: 21 ADPRVENWLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSV 80
Query: 81 FGVY 84
+ Y
Sbjct: 81 YMCY 84
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus
musculus GN=Elovl7 PE=2 SV=1
Length = 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 21 TDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSA 80
DPR D+ S +++ Y YFV LGP M+NR+P+ L + YN F +L+S
Sbjct: 21 ADPRVEDYLLMSSPLPQTIILGLYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSV 80
Query: 81 FGVY 84
+ Y
Sbjct: 81 YMCY 84
>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus
musculus GN=Elovl1 PE=2 SV=1
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 5 ITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNL 64
+ VVN+ + L++ H DPR + + GS ++ Y YF+ LGP M NR+P+ L
Sbjct: 1 MEAVVNLYHELMK--HADPRIQSYPLMGSPLLITSILLTYVYFILSLGPRIMANRKPFQL 58
Query: 65 DTVLKVYNVFQILYSAFGVY 84
+ VYN ++ S + VY
Sbjct: 59 RGFMIVYNFSLVILSLYIVY 78
>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo
sapiens GN=ELOVL1 PE=1 SV=1
Length = 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 5 ITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNL 64
+ VVN+ +++ H DPR + + GS ++ Y YFV LGP M NR+P+ L
Sbjct: 1 MEAVVNLYQEVMK--HADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQL 58
Query: 65 DTVLKVYNVFQILYSAFGVY 84
+ VYN + S + VY
Sbjct: 59 RGFMIVYNFSLVALSLYIVY 78
>sp|Q8BHI7|ELOV5_MOUSE Elongation of very long chain fatty acids protein 5 OS=Mus
musculus GN=Elovl5 PE=1 SV=1
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 22 DPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAF 81
D R + WF + + P + Y + +LGP +MKNRQP++ +L++YN+ L S +
Sbjct: 20 DTRVKGWFLLDN-YIPTFVCSVIYLLIVWLGPKYMKNRQPFSCRGILQLYNLGLTLLSLY 78
Query: 82 GVYIVSPGI 90
Y + G+
Sbjct: 79 MFYELVTGV 87
>sp|Q920L7|ELOV5_RAT Elongation of very long chain fatty acids protein 5 OS=Rattus
norvegicus GN=Elovl5 PE=2 SV=1
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 22 DPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAF 81
D R + WF + + P + Y + +LGP +MKNRQP++ +L VYN+ L S +
Sbjct: 20 DTRVKGWFLLDN-YIPTFVCSAIYLLIVWLGPKYMKNRQPFSCRGILVVYNLGLTLLSLY 78
Query: 82 GVYIVSPGI 90
Y + G+
Sbjct: 79 MFYELVTGV 87
>sp|Q32NI8|ELOV5_XENLA Elongation of very long chain fatty acids protein 5 OS=Xenopus
laevis GN=elovl5 PE=2 SV=1
Length = 295
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 22 DPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAF 81
DPR + W + + P + Y F+ + GP +M+NRQP + ++L VYN+ L S +
Sbjct: 20 DPRVKGWLLLDN-YVPTIFFTALYLFIVWRGPKYMQNRQPVSCRSILVVYNLGLTLLSFY 78
Query: 82 GVYIVSPGI 90
Y + G+
Sbjct: 79 MFYELVTGV 87
>sp|Q5M8U1|ELOV5_XENTR Elongation of very long chain fatty acids protein 5 OS=Xenopus
tropicalis GN=elovl5 PE=2 SV=1
Length = 295
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 22 DPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAF 81
DPR R W + + P +L Y F+ + GP +M+NR P + +L VYN+ L S +
Sbjct: 20 DPRVRGWLLLDN-YVPTILFTALYLFIVWRGPKYMQNRPPVSCRGILVVYNLGLTLLSLY 78
Query: 82 GVYIVSPGI 90
Y + G+
Sbjct: 79 MFYELVTGV 87
>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus
musculus GN=Elovl4 PE=1 SV=2
Length = 312
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 21 TDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSA 80
D R DW S W + Y FV +LGP +MK+R+P+ + VL +YN +L +
Sbjct: 33 ADKRVADWPLMQSPWPTISISTLYLLFV-WLGPKWMKDREPFQMRLVLIIYNFGMVLLNL 91
Query: 81 F 81
F
Sbjct: 92 F 92
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo
sapiens GN=ELOVL4 PE=1 SV=1
Length = 314
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 21 TDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSA 80
D R +W S W + Y FV +LGP +MK+R+P+ + VL +YN +L +
Sbjct: 33 ADKRVENWPLMQSPWPTLSISTLYLLFV-WLGPKWMKDREPFQMRLVLIIYNFGMVLLNL 91
Query: 81 F 81
F
Sbjct: 92 F 92
>sp|Q2KJD9|ELOV5_BOVIN Elongation of very long chain fatty acids protein 5 OS=Bos taurus
GN=ELOVL5 PE=2 SV=1
Length = 299
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 22 DPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAF 81
D R WF + + P L+ Y + +LGP +MK RQP++ +L VYN+ L S +
Sbjct: 20 DTRVEGWFLLDN-YVPTLVCSILYLLIVWLGPKYMKTRQPFSCRGILVVYNLGLTLLSLY 78
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca
mulatta GN=ELOVL4 PE=3 SV=1
Length = 314
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 21 TDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSA 80
D R +W S W + Y FV +LGP +MK+R+P+ + VL +YN +L +
Sbjct: 33 ADKRVENWPLMQSPWPTLSISTLYLLFV-WLGPKWMKDREPFQMRLVLIIYNFGMVLLNF 91
Query: 81 F 81
F
Sbjct: 92 F 92
>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca
fascicularis GN=ELOVL4 PE=2 SV=1
Length = 314
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 21 TDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSA 80
D R +W S W + Y FV +LGP +MK+R+P+ + VL +YN +L +
Sbjct: 33 ADKRVENWPLMQSPWPTLSISTLYLLFV-WLGPKWMKDREPFQMRLVLIIYNFGMVLLNF 91
Query: 81 F 81
F
Sbjct: 92 F 92
>sp|Q4R516|ELOV5_MACFA Elongation of very long chain fatty acids protein 5 OS=Macaca
fascicularis GN=ELOVL5 PE=2 SV=1
Length = 299
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 22 DPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAF 81
D R + WF + + P + Y + +LGP +M+N+QP++ +L VYN+ L S +
Sbjct: 20 DTRVKGWFLLDN-YIPTFICSVIYLLIVWLGPKYMRNKQPFSCRGILVVYNLGLTLLSLY 78
>sp|Q9NYP7|ELOV5_HUMAN Elongation of very long chain fatty acids protein 5 OS=Homo
sapiens GN=ELOVL5 PE=1 SV=1
Length = 299
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 22 DPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAF 81
D R + WF + + P + Y + +LGP +M+N+QP++ +L VYN+ L S +
Sbjct: 20 DTRVKGWFLLDN-YIPTFICSVIYLLIVWLGPKYMRNKQPFSCRGILVVYNLGLTLLSLY 78
>sp|Q5RFL5|ELOV5_PONAB Elongation of very long chain fatty acids protein 5 OS=Pongo
abelii GN=ELOVL5 PE=2 SV=1
Length = 299
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 22 DPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAF 81
D R + WF + + P + Y + +LGP +M+N+QP++ +L VYN+ L S +
Sbjct: 20 DTRVKGWFLLDN-YIPTFICSVIYLLIVWLGPKYMRNKQPFSCRGILVVYNLGLTLLSLY 78
>sp|Q9JLJ4|ELOV2_MOUSE Elongation of very long chain fatty acids protein 2 OS=Mus
musculus GN=Elovl2 PE=2 SV=1
Length = 292
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 22 DPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAF 81
D R R WF S + P ++ Y +LG +MKNR +L +L +YN+ L SA+
Sbjct: 23 DSRVRGWFLLDS-YLPTFILTITYLLSIWLGNKYMKNRPALSLRGILTLYNLAITLLSAY 81
>sp|Q9NXB9|ELOV2_HUMAN Elongation of very long chain fatty acids protein 2 OS=Homo
sapiens GN=ELOVL2 PE=2 SV=2
Length = 296
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 22 DPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAF 81
D R R WF S F L Y + +LG +MKNR +L +L +YN+ L SA+
Sbjct: 23 DSRVRGWFMLDSYLPTFFLTVMYLLSI-WLGNKYMKNRPALSLRGILTLYNLGITLLSAY 81
>sp|P49191|ELO3_CAEEL Putative fatty acid elongation protein 3 OS=Caenorhabditis
elegans GN=elo-3 PE=1 SV=2
Length = 320
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 26 RDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYNLDTVLKVYNVFQILYSAFGVYI 85
R W + W + Y V F G M+ +P+ LDT L V+N F ++S G
Sbjct: 29 RSTTWMQNHWYQSITASVVYVAVIFTGKKIMEKYKPFQLDTPLFVWNSFLAIFSILGFLR 88
Query: 86 VSP 88
++P
Sbjct: 89 MTP 91
>sp|Q7LKX0|ELOH2_SCHPO Putative elongation of fatty acids protein 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1639.01c PE=3
SV=3
Length = 365
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 45 YYFVKFLGPWFMKNRQPYNLDTVLKVYNV-FQILYSAFGVYI---VSPGI 90
YY + +G M+NRQP L + + YN+ F I + + I V+P I
Sbjct: 82 YYLLILVGGRIMRNRQPIRLQKIFQYYNLTFSIASAILALLIFEQVAPAI 131
>sp|O17204|OSTA3_CAEEL Organic solute transporter alpha-like protein C01B12.4
OS=Caenorhabditis elegans GN=C01B12.4 PE=3 SV=2
Length = 384
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 4 VITGVVNITNYLIETDHTDPRTRDWFWTGSLWRPFLLMCFYYYFVKFLGPWFMKNRQPYN 63
+I ++ + + ++ + R WF L L MC +Y + P + PY
Sbjct: 173 IIRTLLELVSVVVSMEQEGRRESVWFVFSQLM-ALLSMCIAFYGCYVMVPLGREKHAPYR 231
Query: 64 LDTVLKVYNVFQILYS 79
D + + ++ Q +Y+
Sbjct: 232 FDFLFRTCDIAQCIYT 247
>sp|C8BKC7|MYD88_SHEEP Myeloid differentiation primary response protein MyD88 OS=Ovis
aries GN=MYD88 PE=2 SV=2
Length = 296
Score = 29.6 bits (65), Expect = 6.6, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 10 NITNYLIETDHTDPRTRDWFWT 31
+I ++ D+T+P T++WFWT
Sbjct: 266 SILRFITVCDYTNPCTQNWFWT 287
>sp|Q599T9|MYD88_BOVIN Myeloid differentiation primary response protein MyD88 OS=Bos
taurus GN=MYD88 PE=2 SV=1
Length = 296
Score = 29.6 bits (65), Expect = 6.6, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 10 NITNYLIETDHTDPRTRDWFWT 31
+I ++ D+T+P T++WFWT
Sbjct: 266 SILRFITVCDYTNPCTQNWFWT 287
>sp|B3Y681|MYD88_PONPY Myeloid differentiation primary response protein MyD88 OS=Pongo
pygmaeus GN=MYD88 PE=2 SV=1
Length = 296
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 10 NITNYLIETDHTDPRTRDWFWT 31
+I ++ D+T+P T+ WFWT
Sbjct: 266 SILRFITVCDYTNPCTKSWFWT 287
>sp|B3Y678|MYD88_PANTR Myeloid differentiation primary response protein MyD88 OS=Pan
troglodytes GN=MYD88 PE=2 SV=1
Length = 296
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 10 NITNYLIETDHTDPRTRDWFWT 31
+I ++ D+T+P T+ WFWT
Sbjct: 266 SILRFITVCDYTNPCTKSWFWT 287
>sp|B3Y679|MYD88_PANPA Myeloid differentiation primary response protein MyD88 OS=Pan
paniscus GN=MYD88 PE=2 SV=1
Length = 296
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 10 NITNYLIETDHTDPRTRDWFWT 31
+I ++ D+T+P T+ WFWT
Sbjct: 266 SILRFITVCDYTNPCTKSWFWT 287
>sp|B3Y683|MYD88_MACMU Myeloid differentiation primary response protein MyD88 OS=Macaca
mulatta GN=MYD88 PE=2 SV=1
Length = 296
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 10 NITNYLIETDHTDPRTRDWFWT 31
+I ++ D+T+P T+ WFWT
Sbjct: 266 SILRFITVCDYTNPCTKSWFWT 287
>sp|B3Y682|MYD88_MACFA Myeloid differentiation primary response protein MyD88 OS=Macaca
fascicularis GN=MYD88 PE=2 SV=1
Length = 296
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 10 NITNYLIETDHTDPRTRDWFWT 31
+I ++ D+T+P T+ WFWT
Sbjct: 266 SILRFITVCDYTNPCTKSWFWT 287
>sp|Q99836|MYD88_HUMAN Myeloid differentiation primary response protein MyD88 OS=Homo
sapiens GN=MYD88 PE=1 SV=1
Length = 296
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 10 NITNYLIETDHTDPRTRDWFWT 31
+I ++ D+T+P T+ WFWT
Sbjct: 266 SILRFITVCDYTNPCTKSWFWT 287
>sp|B3Y680|MYD88_GORGO Myeloid differentiation primary response protein MyD88 OS=Gorilla
gorilla gorilla GN=MYD88 PE=2 SV=1
Length = 296
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 10 NITNYLIETDHTDPRTRDWFWT 31
+I ++ D+T+P T+ WFWT
Sbjct: 266 SILRFITVCDYTNPCTKSWFWT 287
>sp|B6CJX2|MYD88_CERAT Myeloid differentiation primary response protein MyD88
OS=Cercocebus atys GN=Myd88 PE=2 SV=1
Length = 296
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 10 NITNYLIETDHTDPRTRDWFWT 31
+I ++ D+T+P T+ WFWT
Sbjct: 266 SILRFITVCDYTNPCTKSWFWT 287
>sp|O51253|LNT_BORBU Apolipoprotein N-acyltransferase OS=Borrelia burgdorferi (strain
ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=lnt PE=3
SV=1
Length = 521
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 39 LLMCFYYYF--VKFLG-PWFMKNRQPYNLDTVLKVYNVFQILYSAFGVYIVSPGI 90
+L FY Y + FL PW + N + ++++ ++F + + +F VY ++ GI
Sbjct: 117 MLFTFYDYSRSIGFLAYPWGLAAFTVNNFNNLIQIADIFGVFFVSFAVYFLNSGI 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.145 0.504
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,658,597
Number of Sequences: 539616
Number of extensions: 1296920
Number of successful extensions: 3132
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3084
Number of HSP's gapped (non-prelim): 50
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)