BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12396
(348 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q16363|LAMA4_HUMAN Laminin subunit alpha-4 OS=Homo sapiens GN=LAMA4 PE=1 SV=4
Length = 1823
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 161/312 (51%), Gaps = 13/312 (4%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G + +SR E+ + G F K FSI ++T S G+IFYV+D + D++ L++ G++ Y
Sbjct: 1473 GGTANSRQEFEHLKGDFGAKSQFSIRLRTRSSH-GMIFYVSDQEENDFMTLFLAHGRLVY 1531
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
FN G + + S +K DG WH V F R++ SG+L IDG V E + T I G
Sbjct: 1532 MFNVGHKKLKIRSQEKYN-DGLWHDVIFIRERSSGRLVIDGLRVLEESLPPTEATWKIKG 1590
Query: 128 PFYLGGVPLNTSTLVRGNLGLND--TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD-KTES 184
P YLGGV + N+ +N +F GCL NL+ N + + V PC + E+
Sbjct: 1591 PIYLGGVAPGKAV---KNVQINSIYSFSGCLSNLQLNGASITSASQTFSVTPCFEGPMET 1647
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHS-KKDYFILQMIDGSVKA 243
G +F GGYV E F +G + E+ +V+PR+ SG L+ HS +Y + M +G V
Sbjct: 1648 GTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVHGHSVNGEYLNVHMKNGQVIV 1707
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
V+NG S TP CDG+WH I I+ NV+ + VDS +GP
Sbjct: 1708 KVNNGIRDFSTSVTPKQS--LCDGRWHRITVIRDSNVVQLDVDSEVNHV--VGPLNPKPI 1763
Query: 304 DTNNAVFIGGHP 315
D VF+GG P
Sbjct: 1764 DHREPVFVGGVP 1775
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 17/234 (7%)
Query: 19 TITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH--YSFNCGSGPM 76
T G+F F I+++T ++ +G+I + V + L +++G +H Y F GP+
Sbjct: 1064 TRRGKFGQVTRFDIEVRTPAD-NGLILLM--VNGSMFFRLEMRNGYLHVFYDFGFSGGPV 1120
Query: 77 ALSSGDK--LILDGEWHTVEF-SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
L K I D ++H + L +D + V +S + K F Y+GG
Sbjct: 1121 HLEDTLKKAQINDAKYHEISIIYHNDKKMILVVDRRHV---KSMDNEKMKIPFTDIYIGG 1177
Query: 134 VP--LNTSTLVRGNLGLNDTFVGCLRNL----KSNNKLVQDKHTSSGVIPCSDKTESGVF 187
P + S +R +L L+ F GC++ K N L Q + G D S
Sbjct: 1178 APPEILQSRALRAHLPLDINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRA 1237
Query: 188 FYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSV 241
++N ++ +++ E + + +GLL S D F + + +G+V
Sbjct: 1238 YFNGQSFIASIQKISFFDGFEGGFNFRTLQPNGLLFYYASGSDVFSISLDNGTV 1291
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 135/325 (41%), Gaps = 52/325 (16%)
Query: 37 TSEQDGIIFYV-ADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLI--LDGEWHTV 93
T D I Y+ + +Y+ L +K+ + Y +N G+ + + K + + V
Sbjct: 875 TETADQFILYLGSKNAKKEYMGLAIKNDNLVYVYNLGTKDVEIPLDSKPVSSWPAYFSIV 934
Query: 94 EFSRQQLSGKLKI---------DGQVVAEGESKGSSKTLNIFGP---FYLGGVPLNTSTL 141
+ R GK+ + + + + +GE G L++ FY+GGVP N
Sbjct: 935 KIERVGKHGKVFLTVPSLSSTAEEKFIKKGEFSGDDSLLDLDPEDTVFYVGGVPSNFKLP 994
Query: 142 VRGNLGLNDTFVGCLRNLKSNNKLV---QDKHT----SSGVIPCS------DKTESGVFF 188
NL FVGCL NN ++ KH S +PC+ ++ + +F
Sbjct: 995 TSLNL---PGFVGCLELATLNNDVISLYNFKHIYNMDPSTSVPCARDKLAFTQSRAASYF 1051
Query: 189 YNSGGY--VKGV-EQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATV 245
++ GY V+ + + + G+ ++V+ +GL+L + + +F L+M +G +
Sbjct: 1052 FDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLMVNGSMFFRLEMRNGYLHVFY 1111
Query: 246 DNG--KGPISAIYTPSDPYFFCDGQWHTIVAI--KTKNVISVA----VDSMTTDKPGLGP 297
D G GP+ T D ++H I I K +I V V SM +K +
Sbjct: 1112 DFGFSGGPVHLEDTLKKAQIN-DAKYHEISIIYHNDKKMILVVDRRHVKSMDNEKMKI-- 1168
Query: 298 PGSSETDTNNAVFIGGHPFLSLSSK 322
TD ++IGG P L S+
Sbjct: 1169 ---PFTD----IYIGGAPPEILQSR 1186
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 170/314 (54%), Gaps = 15/314 (4%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
+ R++ ++ + + D I +T +G++ Y + D++A+Y+ DG++ Y
Sbjct: 3356 REQRLQINSLPVKVRRHHDIGISFRT-ERPNGLLIYAGSKQRDDFIAVYLLDGRVTYEIR 3414
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQ-----LSGKLKIDGQVVAEGESKGSSKTLNI 125
G+ A + + + DG WHTVE R Q L KL+ G V E S+ L +
Sbjct: 3415 VGAQLQAKITTEAELNDGTWHTVEVVRTQRKVSLLIDKLEQPGSVDLNAER--SAPVLAV 3472
Query: 126 FGPFYLGGVPLNTSTLVRGNLGLNDT----FVGCLRNLKSNNKLVQDKHTSSGVIPCSDK 181
P YLGGV + V+ NL T F GCL+N+K + ++ GV+PCS++
Sbjct: 3473 ELPIYLGGVNKFLESEVK-NLTDFKTEVPYFNGCLKNIKFDAMDLETPPEEFGVVPCSEQ 3531
Query: 182 TESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSV 241
E G+FF N +VK + F VG EM++ D +PR+ +GLL SVH K Y IL+++D ++
Sbjct: 3532 VERGLFFNNQKAFVKIFDHFDVGTEMKISFDFRPRDPNGLLFSVHGKNSYAILELVDNTL 3591
Query: 242 KATVDNG-KGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGS 300
TV K +S Y + FCDG+ + AIK+K VI++AVD ++++ PG+G GS
Sbjct: 3592 YFTVKTDLKNIVSTNYKLPNNESFCDGKTRNVQAIKSKFVINIAVDFISSN-PGVGNEGS 3650
Query: 301 SETDTNNAVFIGGH 314
T TN +F+GGH
Sbjct: 3651 VITRTNRPLFLGGH 3664
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 131/329 (39%), Gaps = 33/329 (10%)
Query: 14 RIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVAD-----VKHIDYVALYVKDGQIHYS 68
++ P T + + S +TT E G + Y+ + K+ D+VA+ + +G +
Sbjct: 2684 ELKTPEKTKLLATRTNLSTYFRTT-EPSGFLLYLGNDNKTAQKNNDFVAVEIVNGYPILT 2742
Query: 69 FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-----DGQVVAEGES---KGSS 120
+ G+GP ++S DK + DG W+ R + KL I +G VV +S +GS
Sbjct: 2743 IDLGNGPERITS-DKYVADGRWYQAVVDRMGPNAKLTIREELPNGDVVEHSKSGYLEGSQ 2801
Query: 121 KTLNI--FGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV----------QD 168
L++ ++GG P + +L N +F G + +LK ++ V D
Sbjct: 2802 NILHVDKNSRLFVGGYPGISDFNAPPDLTTN-SFSGDIEDLKIGDESVGLWNFVYGDDND 2860
Query: 169 KHTSSGVIPCSDKTESGVFFYNSGGYVK--GVEQFRVGREMELKMDVKPRNISGLLLSVH 226
+ + K + GYV+ + ++ +GLL
Sbjct: 2861 QGARERDVLLEKKKPVTGLRFKGNGYVQLNATSNLKSRSSIQFSFKADKDTSNGLLFFYG 2920
Query: 227 SKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
K Y ++MIDG++ + G+G + + S + D QWH + A + + VD
Sbjct: 2921 RDKHYMSIEMIDGAIFFNISLGEG--GGVQSGSQDRYN-DNQWHKVQAERENRNGLLKVD 2977
Query: 287 SMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+ + E ++ GGHP
Sbjct: 2978 DIVISRTNAPLEADLELPKLRRLYFGGHP 3006
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 30/281 (10%)
Query: 27 KFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLIL 86
+F F D T+ +G++F+ KH Y+++ + DG I ++ + G G S
Sbjct: 2902 QFSFKADKDTS---NGLLFFYGRDKH--YMSIEMIDGAIFFNISLGEGGGVQSGSQDRYN 2956
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSK-TLNIFGPFYLGGVP--LNTSTLVR 143
D +WH V+ R+ +G LK+D V++ + + L Y GG P LNTS
Sbjct: 2957 DNQWHKVQAERENRNGLLKVDDIVISRTNAPLEADLELPKLRRLYFGGHPRRLNTS---- 3012
Query: 144 GNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSSGVIP--CSDKTESGVFFY-NSGGYVKGVE 199
+ L F GC+ N+ N +V ++ + G + CS K + V + + G+++ +
Sbjct: 3013 --ISLQPNFDGCIDNVVINQGVVDLTEYVTGGGVEEGCSAKFSTVVSYAPHEYGFLR-MN 3069
Query: 200 QFRVGREMELKMDVKPRNISGLLL--SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYT 257
+ + + K +G+L + H + L + DG +K N G I
Sbjct: 3070 NVSSDNNLHVVLHFKTTQPNGVLFYAANHDQSSTIGLSLQDGLLKL---NSMGSQLVI-- 3124
Query: 258 PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPP 298
D DG+ H + T+ + + VD + D LG P
Sbjct: 3125 --DDRILNDGEDHVVTVQHTQGELRLTVDDV--DNKRLGSP 3161
>sp|P97927|LAMA4_MOUSE Laminin subunit alpha-4 OS=Mus musculus GN=Lama4 PE=1 SV=2
Length = 1816
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 158/312 (50%), Gaps = 13/312 (4%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G + +SR E+ G F K F+I +KT S G+IFYV+D + D++ L++ G++ +
Sbjct: 1466 GGTANSRQEFEHEQGDFGEKSQFAIRLKTRSSH-GMIFYVSDQEENDFMTLFLAHGRLVF 1524
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
FN G + + S +K DG WH V F R++ SG+L IDG V E S I G
Sbjct: 1525 MFNVGHKKLKIRSQEKYN-DGLWHDVIFIREKSSGRLVIDGLRVLEERLPPSGAAWKIKG 1583
Query: 128 PFYLGGVPLNTSTLVRGNLGLND--TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD-KTES 184
P YLGGV + N+ + +F GCL NL+ N + + V PC + E+
Sbjct: 1584 PIYLGGVAPGRAV---KNVQITSVYSFSGCLGNLQLNGASITSASQTFSVTPCFEGPMET 1640
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHS-KKDYFILQMIDGSVKA 243
G +F GGYV E F +G + E+ +V+PR+ SG L+ HS +Y + M +G V
Sbjct: 1641 GTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVHGHSVNGEYLNVHMRNGQVIV 1700
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
V+NG S TP CDG+WH I I+ NV+ + VDS +GP
Sbjct: 1701 KVNNGVRDFSTSVTPKQN--LCDGRWHRITVIRDSNVVQLDVDSEVNHV--VGPLNPKPV 1756
Query: 304 DTNNAVFIGGHP 315
D VF+GG P
Sbjct: 1757 DHREPVFVGGVP 1768
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 29/312 (9%)
Query: 19 TITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH--YSFNCGSGPM 76
T G+F F I+I+T ++ +G++ + V + +L +++G +H Y F +GP+
Sbjct: 1059 TRRGKFGQVTRFDIEIRTPAD-NGLVLLM--VNGSMFFSLEMRNGYLHVFYDFGFSNGPV 1115
Query: 77 ALSSGDK--LILDGEWHTVEFSRQQLSGK-LKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
L K I D ++H + L +D + V +S + K F Y+GG
Sbjct: 1116 HLEDTLKKAQINDAKYHEISIIYHNDKKMILVVDRRHV---KSTDNEKKKIPFTDIYIGG 1172
Query: 134 VP---LNTSTLVRGNLGLNDTFVGCLRNL----KSNNKLVQDKHTSSGVIPCSDKTESGV 186
P L + TL R +L L+ F GC++ K N L Q + G D S
Sbjct: 1173 APQEVLQSRTL-RAHLPLDINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRR 1231
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVD 246
++N ++ +++ E + + +GLL S D F + + +G+V V
Sbjct: 1232 AYFNGQSFIASIQKISFFDGFEGGFNFRTLQPNGLLFYYTSGSDVFSISLDNGTVVMDV- 1290
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS--MTTDKPGLGPPGSSETD 304
KG I S + DG H +V + + VD + P G ++T
Sbjct: 1291 --KG----IKVMSTDKQYHDGLPHFVVTSISDTRYELVVDKSRLRGKNPTKGKAEQTQT- 1343
Query: 305 TNNAVFIGGHPF 316
T + GG P
Sbjct: 1344 TEKKFYFGGSPI 1355
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLI--LDGEWHTVEFSRQQLSGKLKI----- 106
+Y+ L +K+ + Y +N G + + K + + V+ R GK+ +
Sbjct: 888 EYMGLAIKNDNLVYVYNLGMKDVEILLDSKPVSSWPAYFSIVKIERVGKHGKVFLTVPSL 947
Query: 107 ----DGQVVAEGESKGSSKTLNIFGP---FYLGGVPLNTSTLVRGNLGLNDTFVGCLRNL 159
+ + + +GE G L++ FY+GGVP N NL ++ GCL
Sbjct: 948 SSTAEEKFIKKGEFAGDDSLLDLTPEDTVFYVGGVPANFKLPASLNL---PSYSGCLELA 1004
Query: 160 KSNNKLV---QDKHT----SSGVIPCS------DKTESGVFFYNSGGY--VKGV-EQFRV 203
NN ++ KH S +PC+ ++ + +F++ Y V+ + + +
Sbjct: 1005 TLNNDVISLYNFKHIYNMDPSKSVPCARDKLAFTQSRAASYFFDGSSYAVVRDITRRGKF 1064
Query: 204 GREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNG--KGPI 252
G+ ++++ +GL+L + + +F L+M +G + D G GP+
Sbjct: 1065 GQVTRFDIEIRTPADNGLVLLMVNGSMFFSLEMRNGYLHVFYDFGFSNGPV 1115
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 154 bits (390), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 173/313 (55%), Gaps = 15/313 (4%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G+ + SRIEY + +F+ I+ TS+ +GIIF +A K D++A+ ++ G++ +
Sbjct: 3314 GSQQYSRIEYDILPEAIDKSGEFTFKIRPTSD-NGIIF-IATNKRTDHIAVMLEHGRVVF 3371
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGESKGSSKTLNIF 126
+++ GSG + + S DK I+DG WHT++ SR+ S L +D +EG + + +
Sbjct: 3372 TYDTGSGQVIIKS-DKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESEGAANQNEDLIETQ 3430
Query: 127 GPFYLGGVPLNTSTLVRGNL--GLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTES 184
PFY+GGVP + + R NL G+ F GC+++ K N K + D G CS +E
Sbjct: 3431 PPFYVGGVPADLAGFAR-NLVVGVRSQFSGCIKDFKLNGKSL-DNGKEFGTEQCSQFSEP 3488
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKAT 244
G++F GGY + + VG L+++++PR +G+L SV +Y ++ ++GS+K T
Sbjct: 3489 GMYFGKDGGYAIVQKDYEVGLTFGLEVEMRPRMKNGILFSV-GVLEYITVEFVNGSIKTT 3547
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
V++G G + P +CDGQW + K +N+++VAV+ K L ++TD
Sbjct: 3548 VESGSGGEELWHHPDIENQYCDGQWQSFKISKKRNLLTVAVNG----KAHLKILKKAKTD 3603
Query: 305 --TNNAVFIGGHP 315
T + ++ GG P
Sbjct: 3604 VLTKDPLYFGGLP 3616
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 24/254 (9%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLS 101
G++F+V K D++AL + DG + S + GSG + DG+WHTV R++
Sbjct: 2933 GLLFFVG--KDKDFMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSIVREEKH 2990
Query: 102 GKLKIDGQV-VAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFV---GCLR 157
K+ IDG+ V EG+ G +++ Y+GG P L + T V GC++
Sbjct: 2991 VKIMIDGETEVLEGDVPGKDSEMSVTEFLYIGGTP--------SGLSVRTTIVPLRGCIK 3042
Query: 158 NLK--SNNKLVQDKHTSSGVIP-CSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVK 214
++K S+N ++ H S GV C + V F + ++ + K
Sbjct: 3043 SVKLGSDNVDLESSHASKGVRSGCPLHSVRTVSFLSDRTTASFNNATEFSEDVSVTFKFK 3102
Query: 215 PRNIS--GLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI 272
R+I L +V+ +D + I+ TV +G+ I+ + + P D +WH +
Sbjct: 3103 TRSIRQPSSLFTVNDDEDSVLSVSINEDGILTVTSGED-IATLELAASP----DEKWHYV 3157
Query: 273 VAIKTKNVISVAVD 286
KTK +I + D
Sbjct: 3158 SIRKTKYIIRIDAD 3171
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 121/286 (42%), Gaps = 27/286 (9%)
Query: 50 VKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSR--QQLSGKLKID 107
V DYVA ++ G+ + + G P A+ D + DG W + R + +S L
Sbjct: 2747 VPTADYVAAEIEYGRPKITVDLGDAP-AVVKLDTPVNDGLWRRLNIERIGKTVSVTLSKP 2805
Query: 108 GQV-VAEGESK---GSSKTLNI---FGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLK 160
V AE +S G+ LN+ ++GGVP TS + +L N FVG + +LK
Sbjct: 2806 NSVETAETKSSVAGGNKSVLNLNQQISRLFVGGVP--TSARISKDL-YNRDFVGDIESLK 2862
Query: 161 ----------SNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVK-GVEQFRVGREMEL 209
S K + + + +D + V + GY + + ++
Sbjct: 2863 LHGEPIGLWNSREKGNTNVNGAQKKPKITDNADELVVSLDGEGYTSYKPSHWNPRKATKI 2922
Query: 210 KMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQW 269
+ + GLL V KD+ L++ DG VK +VD G G + T S Y DG+W
Sbjct: 2923 SLSFLTFSPHGLLFFVGKDKDFMALELSDGGVKLSVDLGSG-VGQWITESSNYN--DGKW 2979
Query: 270 HTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
HT+ ++ + + + +D T G P SE ++IGG P
Sbjct: 2980 HTVSIVREEKHVKIMIDGETEVLEGDVPGKDSEMSVTEFLYIGGTP 3025
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 10/311 (3%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S I + KN+ ++++T +E G++FY+A + H D+ + +++G ++
Sbjct: 2767 GLSRNSHIAIAFDDTKVKNRLTIELEVRTEAES-GLLFYMARINHADFATVQLRNGLPYF 2825
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG K I DG+WH ++ R + G L +DG S + L++ G
Sbjct: 2826 SYDLGSGDTHTMIPTK-INDGQWHKIKIMRSKQEGILYVDG-ASNRTISPKKADILDVVG 2883
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSG--VIPCSDKTESG 185
Y+GG+P+N +T G + + GC+RNL + +S V C + G
Sbjct: 2884 MLYVGGLPINYTTRRIGPVTY--SIDGCVRNLHMAEAPADLEQPTSSFHVGTCFANAQRG 2941
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V F+VG ++ ++ + + +G+LL + S+K D ++MID +
Sbjct: 2942 TYF-DGTGFAKAVGGFKVGLDLLVEFEFRTTTTTGVLLGISSQKMDGMGIEMIDEKLMFH 3000
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
VDNG G +A+Y P CDGQWH + A K K+ I + VD + P S+ D
Sbjct: 3001 VDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDGNQVEAQSPN-PASTSAD 3059
Query: 305 TNNAVFIGGHP 315
TN+ VF+GG P
Sbjct: 3060 TNDPVFVGGFP 3070
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 29/271 (10%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLS 101
++ Y+A D++++ + DG I S++ GSG MA ++ DG+W + SR Q
Sbjct: 2375 ALLMYLATRDLRDFMSVELTDGHIKVSYDLGSG-MASVVSNQNHNDGKWKSFTLSRIQKQ 2433
Query: 102 GKLKIDGQVVAEGESKGSSKTLNIFG-------PFYLGGVPL--NTSTLVRGNLGLNDTF 152
+ I + E+ +S + N FG Y GG+P N S R + L +
Sbjct: 2434 ANISIVDIDTNQEENIATSSSGNNFGLDLKADDKIYFGGLPTLRNLSMKARPEVNLK-KY 2492
Query: 153 VGCLRNL---KSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMEL 209
GCL+++ ++ ++ CS + V F G VG E+ L
Sbjct: 2493 SGCLKDIEISRTPYNILSSPDYVGVTKGCSLENVYTVSFPKPGFVELSPVPIDVGTEINL 2552
Query: 210 KMDVKPRNISGLLL-------------SVHSKKDYFILQMIDGSVKATVDNGKGPISAIY 256
K N SG++L + + Y+ + + G ++ + G + I
Sbjct: 2553 SFSTK--NESGIILLGSGGTPAPPRRKRRQTGQAYYAILLNRGRLEVHLSTGARTMRKIV 2610
Query: 257 TPSDPYFFCDGQWHTIVAIKTKNVISVAVDS 287
+P F DG+ H++ +T+ + +V VD
Sbjct: 2611 IRPEPNLFHDGREHSVHVERTRGIFTVQVDE 2641
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 38/320 (11%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFS 96
T+ D ++FY+ K ID++A+ ++ G++ + ++ GSG + D I D W+ + S
Sbjct: 2176 TAVADNLLFYLGSAKFIDFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDDSYWYRIVAS 2235
Query: 97 RQQLSGKLKI---DG---QVVAEGESKGSSKTLNIF-----GPFYLGGVPLNTSTLVRGN 145
R +G + + DG +V S I ++GG+ T L + +
Sbjct: 2236 RTGRNGTISVRALDGPKASIVPSTHHSTSPPGYTILDVDANAMLFVGGL---TGKLKKAD 2292
Query: 146 LGLNDTFVGCLRNLKSNNKLV-----QDKHTSSGVIPCSDKTE--SGVFFYNSGGYVKGV 198
TF GC+ +NK + ++K S + E G ++ GY
Sbjct: 2293 AVRVITFTGCMGETYFDNKPIGLWNFREKEGDCKGCTVSPQVEDSEGTIQFDGEGYALVS 2352
Query: 199 EQFRVGREMELKMDVKPRNISG----LLLSVHSKKDYFILQMIDGSVKATVDNGKGPISA 254
R + M K R S + L+ +D+ +++ DG +K + D G G S
Sbjct: 2353 RPIRWYPNISTVM-FKFRTFSSSALLMYLATRDLRDFMSVELTDGHIKVSYDLGSGMASV 2411
Query: 255 IYTPSDPYFFCDGQWH--TIVAIKTKNVISVAVDSMTTDKPGLGPPGSS-----ETDTNN 307
+ + DG+W T+ I+ + IS+ VD T + + S + ++
Sbjct: 2412 VSNQNHN----DGKWKSFTLSRIQKQANISI-VDIDTNQEENIATSSSGNNFGLDLKADD 2466
Query: 308 AVFIGGHPFLSLSSKKSGPR 327
++ GG P L S K+ P
Sbjct: 2467 KIYFGGLPTLRNLSMKARPE 2486
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN=Lama1 PE=1 SV=1
Length = 3084
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 164/314 (52%), Gaps = 14/314 (4%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S + P + + + I+T + G+I+YVA +DY L +++G++H+
Sbjct: 2726 GLSQNSHLVLPLNQSDVRKRLQVQLSIRTFAS-SGLIYYVAHQNQMDYATLQLQEGRLHF 2784
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
F+ G G +S L+ DG+WHTV+ + + +DGQ G++ TL++
Sbjct: 2785 MFDLGKGRTKVSH-PALLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGNATTLDVER 2843
Query: 128 PFYLGGVPLNTSTLVRGNLG-LNDTFVGCLRNLKSN-NKLVQDKHTS-SGVIPCSDKTES 184
YLGG+P S N+G + + C+ + N +L +D+ S S V C +
Sbjct: 2844 KLYLGGLP---SHYRARNIGTITHSIPACIGEIMVNGQQLDKDRPLSASAVDRCYVVAQE 2900
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKA 243
G FF SG E ++V ++ + ++ + + +G+LL + S K D L+++DG V
Sbjct: 2901 GTFFEGSGYAALVKEGYKVRLDLNITLEFRTTSKNGVLLGISSAKVDAIGLEIVDGKVLF 2960
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD--SMTTDKPGLGPPGSS 301
V+NG G I+A Y P CDG+WHT+ A K+K+ I + VD S+ + P S+
Sbjct: 2961 HVNNGAGRITATYQPRAARALCDGKWHTLQAHKSKHRIVLTVDGNSVRAESPHT---HST 3017
Query: 302 ETDTNNAVFIGGHP 315
DTN+ +++GG+P
Sbjct: 3018 SADTNDPIYVGGYP 3031
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 151/317 (47%), Gaps = 36/317 (11%)
Query: 41 DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQL 100
+G++FY+A D++++ + G++ + GSGP+ L + D+ +G W+ + F R +
Sbjct: 2347 NGLLFYLASNGTKDFLSIELVRGRVKVMVDLGSGPLTLMT-DRRYNNGTWYKIAFQRNRK 2405
Query: 101 SGKLKI------DGQVVAEGESKGSSKTLNIFGP--FYLGGVPLNTSTLVRGNLGLNDTF 152
G L + + +GE+ G++ LN Y+GG+P S VR + + ++
Sbjct: 2406 QGLLAVFDAYDTSDKETKQGETPGAASDLNRLEKDLIYVGGLP--HSKAVRKGVS-SRSY 2462
Query: 153 VGCLRNLKSNNKLVQDKHTSSGVIP-CSDKTESGVFFYNSGGYVKGVEQFRVGREMELKM 211
VGC++NL+ + S GV C+ + V F GGYV+ + + E L
Sbjct: 2463 VGCIKNLEISRSTFDLLRNSYGVRKGCALEPIQSVSFLR-GGYVE-MPPKSLSPESSLLA 2520
Query: 212 DVKPRNISGLLLSVHSKK-----------DYFILQMIDGSVKATVDNGKGPI---SAIYT 257
+N SG+LL K +F + +++G ++ V++G G + ++
Sbjct: 2521 TFATKNSSGILLVALGKDAEEAGGAQAHVPFFSIMLLEGRIEVHVNSGDGTSLRKALLHA 2580
Query: 258 PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFL 317
P+ Y DGQ H+I ++ + VI++ VD + + LGP +T + ++IGG P
Sbjct: 2581 PTGSYS--DGQEHSISLVRNRRVITIQVDENSPVEMKLGPLTEGKTIDISNLYIGGLP-- 2636
Query: 318 SLSSKKSGPRTKRRSVF 334
K+ P K R+ F
Sbjct: 2637 ---EDKATPMLKMRTSF 2650
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 137/308 (44%), Gaps = 44/308 (14%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFS 96
T E D ++FY+ D++A+ ++ G++ + ++ GSG L + I + WH++ +
Sbjct: 2156 TQEPDNLLFYLGSSSSSDFLAVEMRRGKVAFLWDLGSGSTRLEFPEVSINNNRWHSIYIT 2215
Query: 97 RQQLSGKLKIDGQVVAEG------ESKGSSKTLNIFGP--FYLGGV-------PLNTSTL 141
R G L + AE +S G SK L+I ++GG+ P T
Sbjct: 2216 RFGNMGSLSVKEASAAENPPVRTSKSPGPSKVLDINNSTLMFVGGLGGQIKKSPAVKVTH 2275
Query: 142 VRGNLG---LNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGV 198
+G +G LN +G ++ K +G S + E F ++ GY
Sbjct: 2276 FKGCMGEAFLNGKSIGLWNYIEREGKC-------NGCFG-SSQNEDSSFHFDGSGYAMVE 2327
Query: 199 EQFR--VGREMELKMDVKPRNISGLL--LSVHSKKDYFILQMIDGSVKATVDNGKGPISA 254
+ R V + + L P +GLL L+ + KD+ ++++ G VK VD G GP++
Sbjct: 2328 KTLRPTVTQIVILFSTFSP---NGLLFYLASNGTKDFLSIELVRGRVKVMVDLGSGPLTL 2384
Query: 255 IYTPSDPYFFCDGQWHTIVAIKTKNVISVAV-DSMTTD----KPGLGPPGSSETD--TNN 307
+ +D + +G W+ I + + +AV D+ T K G P +S+ + +
Sbjct: 2385 M---TDRRYN-NGTWYKIAFQRNRKQGLLAVFDAYDTSDKETKQGETPGAASDLNRLEKD 2440
Query: 308 AVFIGGHP 315
+++GG P
Sbjct: 2441 LIYVGGLP 2448
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 164/313 (52%), Gaps = 14/313 (4%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S I + KN+ ++++T +E G++FY+ + H D+ + +++G +
Sbjct: 2763 GLSRNSHIAIVFDDTKVKNRLTIELEVRTEAES-GLLFYMGRINHADFGTVQLRNGFPFF 2821
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG K I DG+WH ++ R + G L +D ++ S + L++ G
Sbjct: 2822 SYDLGSGSTRTMIPTK-INDGQWHKIKIVRVKQEGILYVD-DASSQTISPKKADILDVGG 2879
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSS-GVIPCSDKTESG 185
Y+GG+P+N +T G + + GC+RNL V D+ TSS V C ESG
Sbjct: 2880 ILYVGGLPINYTTRRIGPVTY--SLDGCVRNLHMEQAPVDLDQPTSSFHVGTCFANAESG 2937
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V F VG ++ ++ + + +G+LL + S+K D ++MID +
Sbjct: 2938 TYF-DGTGFGKAVGGFIVGLDLLVEFEFRTTRPTGVLLGISSQKMDGMGIEMIDEKLMFH 2996
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET- 303
VDNG G +AIY P C+GQW+ + A K KN + + VD D P S+ T
Sbjct: 2997 VDNGAGRFTAIYDAEIPGHMCNGQWYKVTAKKIKNRLELVVDGNQVDAQS---PNSASTS 3053
Query: 304 -DTNNAVFIGGHP 315
DTN+ VF+GG P
Sbjct: 3054 ADTNDPVFVGGFP 3066
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 122/299 (40%), Gaps = 32/299 (10%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLS 101
++ Y+A D++++ + DG + S++ GSG ++ S DG+W SR Q
Sbjct: 2371 ALLMYLATRDLKDFMSVELSDGHVKVSYDLGSGMTSVVSNQNHN-DGKWKAFTLSRIQKQ 2429
Query: 102 GKLKIDGQVVAEGESKGSSKTLNIFG-------PFYLGGVPL--NTSTLVRGNLGLNDTF 152
+ I + E+ +S + N FG Y GG+P N S R + + +
Sbjct: 2430 ANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLSMKARPEVNVK-KY 2488
Query: 153 VGCLRNL---KSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMEL 209
GCL+++ ++ ++ CS + + V F G VG E+ L
Sbjct: 2489 SGCLKDIEISRTPYNILSSPDYVGVTKGCSLENVNTVSFPKPGFVELAAVSIDVGTEINL 2548
Query: 210 KMDVKPRNISGLLL-------------SVHSKKDYFILQMIDGSVKATVDNGKGPISAIY 256
RN SG++L + + Y+ + + G ++ + +G + I
Sbjct: 2549 SFST--RNESGIILLGSGGTLTPPRRKRRQTTQAYYAIFLNKGRLEVHLSSGTRTMRKIV 2606
Query: 257 TPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+P F DG+ H++ +T+ + +V +D D+ + + +F+GG P
Sbjct: 2607 IKPEPNLFHDGREHSVHVERTRGIFTVQIDE---DRRHIQNLTEEQPIEVKKLFVGGAP 2662
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 36/319 (11%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFS 96
T+ D ++FY+ K ID++A+ ++ G++ + + GSG + D I D W+ +E S
Sbjct: 2172 TAVADNLLFYLGSAKFIDFLAIEMRKGKVSFLWIVGSGVGRVGFPDLTIDDSYWYRIEAS 2231
Query: 97 RQQLSGKLKI---DGQVVAEGESKGSSKT--------LNIFGPFYLGGVPLNTSTLVRGN 145
R +G + + DG + S S + ++ ++GG+ T + + +
Sbjct: 2232 RTGRNGSISVRALDGPKASMVPSTYHSVSPPGYTILDVDANAMLFVGGL---TGKIKKAD 2288
Query: 146 LGLNDTFVGCLRNLKSNNKLV-----QDKHTSSGVIPCSDKTE--SGVFFYNSGGYVKGV 198
TF GC+ +NK + ++K S + E G ++ GY
Sbjct: 2289 AVRVITFTGCMGETYFDNKPIGLWNFREKEGDCKGCTVSPQVEDSEGTIQFDGEGYALVS 2348
Query: 199 EQFRVGREMELKMDVKPRNISG----LLLSVHSKKDYFILQMIDGSVKATVDNGKGPISA 254
R + M K R S + L+ KD+ +++ DG VK + D G G S
Sbjct: 2349 RPIRWYPNISTVM-FKFRTFSSSALLMYLATRDLKDFMSVELSDGHVKVSYDLGSGMTSV 2407
Query: 255 IYTPSDPYFFCDGQWH--TIVAI-KTKNVISVAVDSMTTDKPGLGPPGSS---ETDTNNA 308
+ + DG+W T+ I K N+ V +DS + G++ + ++
Sbjct: 2408 VSNQNHN----DGKWKAFTLSRIQKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDK 2463
Query: 309 VFIGGHPFLSLSSKKSGPR 327
++ GG P L S K+ P
Sbjct: 2464 IYFGGLPTLRNLSMKARPE 2482
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 158/313 (50%), Gaps = 12/313 (3%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G +++S P + K + I+T + G+I+Y+A DY L + G++H+
Sbjct: 2717 GLTQNSHFILPFNQSAVRKKLSVELSIRTFA-SSGLIYYMAHQNQADYAVLQLHGGRLHF 2775
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
F+ G G +S L+ DG+WHTV+ + G + +DG+ G L++ G
Sbjct: 2776 MFDLGKGRTKVSH-PALLSDGKWHTVKTDYVKRKGFITVDGRESPMVTVVGDGTMLDVEG 2834
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK-LVQDKHTSSGVI-PCSDKTESG 185
FYLGG+P GN+ + C+ ++ N+K L +D S+ + C + G
Sbjct: 2835 LFYLGGLPSQYQARKIGNI--THSIPACIGDVTVNSKQLDKDSPVSAFTVNRCYAVAQEG 2892
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F SG E ++V ++ + ++ + + +G+LL + + K D L+++DG V
Sbjct: 2893 TYFDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDAIGLELVDGKVLFH 2952
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET- 303
V+NG G I+A Y P CDG+WHT+ A K+K+ I++ VD G P + T
Sbjct: 2953 VNNGAGRITAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDGNAV---GAESPHTQSTS 3009
Query: 304 -DTNNAVFIGGHP 315
DTNN +++GG+P
Sbjct: 3010 VDTNNPIYVGGYP 3022
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 28/297 (9%)
Query: 41 DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQL 100
+G++ Y+ D++++ + G++ + GSGP+ L + D+ +G W+ + F R +
Sbjct: 2339 NGLLLYLGSYGTKDFLSIELFRGRVKVMTDLGSGPITLLT-DRRYNNGTWYKIAFQRNRK 2397
Query: 101 SGKLKI------DGQVVAEGESKGSSKTLNIFG--PFYLGGVPLNTSTLVRGNLGLNDTF 152
G L + + +GE+ G+S LN P Y+GG+P S +VR + +F
Sbjct: 2398 QGVLAVIDAYNTSNKETKQGETPGASSDLNRLDKDPIYVGGLP--RSRVVRRGV-TTKSF 2454
Query: 153 VGCLRNLKSNNKLVQDKHTSSGVIP-CSDKTESGVFFYNSGGYVKGVEQFRVGREMELKM 211
VGC++NL+ + S GV C + V F GGY++ + + E E +
Sbjct: 2455 VGCIKNLEISRSTFDLLRNSYGVRKGCLLEPIRSVSFLK-GGYIE-LPPKSLSPESEWLV 2512
Query: 212 DVKPRNISGLLLS-----VHSKKD-------YFILQMIDGSVKATVDNGKGPISAIYTPS 259
N SG++L+ V + D +F + +I G+++ V+ G G
Sbjct: 2513 TFATTNSSGIILAALGGDVEKRGDREEAHVPFFSVMLIGGNIEVHVNPGDGTGLRKALLH 2572
Query: 260 DPYFFC-DGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
P C DGQ H+I ++ + +I+V +D + LG S T + +++GG P
Sbjct: 2573 APTGTCSDGQAHSISLVRNRRIITVQLDENNPVEMKLGTLVESRTINVSNLYVGGIP 2629
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 136/327 (41%), Gaps = 39/327 (11%)
Query: 14 RIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
R P I+ N ++ T E D ++FY+ D++A+ ++ G++ + ++ GS
Sbjct: 2128 RAYQPQISSTNYNTLTLNV---KTQEPDNLLFYLGSSTASDFLAVEMRRGRVAFLWDLGS 2184
Query: 74 GPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
G L D I D WH++ +R G L V E S S T P
Sbjct: 2185 GSTRLEFPDFPIDDNRWHSIHVARFGNIGSLS-----VKEMSSNQKSPTKTSKSPGTANV 2239
Query: 134 VPLNTSTLV-RGNLGLN---------DTFVGCLRNLKSNNK------LVQDKHTSSGVIP 177
+ +N STL+ G LG F GCL N K ++ + G
Sbjct: 2240 LDVNNSTLMFVGGLGGQIKKSPAVKVTHFKGCLGEAFLNGKSIGLWNYIEREGKCRGCFG 2299
Query: 178 CSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHS--KKDYFILQ 235
S + E F ++ GY VE+ ++ M + +GLLL + S KD+ ++
Sbjct: 2300 -SSQNEDPSFHFDGSGY-SVVEKSLPATVTQIIMLFNTFSPNGLLLYLGSYGTKDFLSIE 2357
Query: 236 MIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKT-KNVISVAVDSMTTD--- 291
+ G VK D G GPI+ + +D + +G W+ I + K + +D+ T
Sbjct: 2358 LFRGRVKVMTDLGSGPITLL---TDRRYN-NGTWYKIAFQRNRKQGVLAVIDAYNTSNKE 2413
Query: 292 -KPGLGPPGSSETDT--NNAVFIGGHP 315
K G P SS+ + + +++GG P
Sbjct: 2414 TKQGETPGASSDLNRLDKDPIYVGGLP 2440
>sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2
Length = 3333
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 153/295 (51%), Gaps = 18/295 (6%)
Query: 24 FKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDK 83
K + F++D++TTS + G++F+ ++ALY+ G++ ++ + + S +K
Sbjct: 3006 LKPRSQFAVDMQTTSSR-GLVFHTGTKN--SFMALYLSKGRLVFALGTDGKKLRIKSKEK 3062
Query: 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR 143
DG+WHTV F G+L +DG EG G+S T++I P YLG P +
Sbjct: 3063 CN-DGKWHTVVFGHDGEKGRLVVDGLRAREGSLPGNS-TISIRAPVYLGSPPSGKPKSLP 3120
Query: 144 GNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGVFFYNSGGYVKGVEQFR 202
N +FVGCL+N + ++K + +S GV C E G++F GG+V
Sbjct: 3121 TN-----SFVGCLKNFQLDSKPLYTPSSSFGVSSCLGGPLEKGIYFSEEGGHVVLAHSVL 3175
Query: 203 VGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKATVDNGKGPISAIYTPSDP 261
+G E +L ++PR+++G+L+ + S+ + + + G V A++D+G G S TP
Sbjct: 3176 LGPEFKLVFSIRPRSLTGILIHIGSQPGKHLCVYLEAGKVTASMDSGAGGTSTSVTPKQS 3235
Query: 262 YFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGP-PGSSETDTNNAVFIGGHP 315
CDGQWH++ ++++ + +D+ ++ G P P +S T + +GG P
Sbjct: 3236 --LCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPAS---TQEPLHLGGAP 3285
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 27/147 (18%)
Query: 27 KFDFSIDIKTTSEQDGIIFYVADV--KHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84
K FSI ++ + GI+ ++ KH+ +Y++ G++ S + G+G + S K
Sbjct: 3181 KLVFSIRPRSLT---GILIHIGSQPGKHL---CVYLEAGKVTASMDSGAGGTSTSVTPKQ 3234
Query: 85 -ILDGEWHTVEFSRQQLSGKLKID-------GQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
+ DG+WH+V + +Q L++D GQ+ S P +LGG P
Sbjct: 3235 SLCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPASTQE--------PLHLGGAPA 3286
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNN 163
N +TL + + +F GCLRN+ N+
Sbjct: 3287 NLTTL---RIPVWKSFFGCLRNIHVNH 3310
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 27/264 (10%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSG-PMALSSGDKLILDG 88
F I+TT ++ G++F+ + +++L ++DG++ + S P GD I +G
Sbjct: 2622 FGQTIQTTVDR-GLLFFAENGDR--FISLNIEDGKLMVRYKLNSELPKERGVGDA-INNG 2677
Query: 89 EWHTVEFSRQQLSGKLKIDGQV---VAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGN 145
H+++ +L ++ I+ V + +GE + F +YLGG+P+ +R
Sbjct: 2678 RDHSIQIKIGKLQKRMWINVDVQNTIIDGE-------VFDFSTYYLGGIPI----AIRER 2726
Query: 146 LGLND-TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD--KTESGVFFYNSGGYVKGVEQFR 202
++ F GC++NLK + +V+ T CS+ K F G
Sbjct: 2727 FNISTPAFRGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRSASFSRGGQLSFTDLGLP 2786
Query: 203 VGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPY 262
++ + SG+LL + + + DG ++ + + PI P
Sbjct: 2787 PTDHLQASFGFQTFQPSGILLDHQTWTRNLQVTLEDGYIELSTSDSGSPIF-----KSPQ 2841
Query: 263 FFCDGQWHTIVAIKTKNVISVAVD 286
+ DG H + I + + + +D
Sbjct: 2842 TYMDGLLHYVSVISDNSGLRLLID 2865
>sp|Q61789|LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus musculus GN=Lama3 PE=1 SV=3
Length = 3333
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 156/315 (49%), Gaps = 26/315 (8%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S +S + + K + FS+DI+TTS + G++F+ +VALY+ +G + +
Sbjct: 2990 GDSPTSHLLFKLPQELLKPRLQFSLDIQTTSSR-GLVFHTG--TRDSFVALYLSEGHVIF 3046
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGK---LKIDGQVVAEGESKGSSKTLN 124
+ G + L S ++ DG+WH+V F LSG+ L +DG EG G+S T++
Sbjct: 3047 ALGAGGKKLRLRSKERY-HDGKWHSVVFG---LSGRKVHLVVDGLRAQEGSLPGNS-TIS 3101
Query: 125 IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTE 183
YLG P S + + +FVGCLRN + ++K + SGV PC E
Sbjct: 3102 PREQVYLGLSPSRKSKSLPQH-----SFVGCLRNFQLDSKPLDSPSARSGVSPCLGGSLE 3156
Query: 184 SGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVK 242
G++F GG+V + + L + ++PR+++G+L+ + S+ ++ + M G V
Sbjct: 3157 KGIYFSQGGGHVVLANSVSLEPALTLTLSIRPRSLTGVLIHIASQSGEHLSVYMEAGKVT 3216
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGL--GPPGS 300
++++ G TP CDGQWH++ ++ + + +D+ + G PP S
Sbjct: 3217 TSMNSEAGGTVTSITPK--RSLCDGQWHSVTVSIKQHTLHLELDTYNSYTAGQLSFPPNS 3274
Query: 301 SETDTNNAVFIGGHP 315
T ++ IGG P
Sbjct: 3275 ----TRGSLHIGGVP 3285
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
S I+TT ++ G++F+ + ++++L ++DG + + S P I +G
Sbjct: 2621 LSWTIQTTVDR-GLLFFAEN--QDNFISLNIEDGNLMVKYKLNSEPPKEKGIRDTINNGR 2677
Query: 90 WHTVEFSRQQLSGKLKID---GQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
H + S + ++ I+ ++ EGE + F +YLGG+P+ +R
Sbjct: 2678 DHMILISIGKSQKRMLINMNKHSIIIEGE-------IFDFSTYYLGGIPI----AIRERF 2726
Query: 147 GLND-TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD-----KTESGVFFYNSGGY------ 194
L+ F GC++NLK + +V+ T CS+ +T S ++ GG
Sbjct: 2727 PLSTPAFQGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRTAS----FSRGGQMSFTNL 2782
Query: 195 -VKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPIS 253
V +++F +L + SG LL+ ++ ++ + DG + + + PI
Sbjct: 2783 DVPSLDRF------QLSFGFQTFQPSGTLLNHQTRTSSLLVTLEDGHIALSTRDSSSPIF 2836
Query: 254 AIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
P + DG H + I + + + +D
Sbjct: 2837 -----KSPGTYMDGLLHHVSVISDTSGLRLLID 2864
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 68/130 (52%), Gaps = 20/130 (15%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTVEFSRQQL 100
G++ ++A + +++++Y++ G++ S N +G S + + + DG+WH+V S +Q
Sbjct: 3193 GVLIHIAS-QSGEHLSVYMEAGKVTTSMNSEAGGTVTSITPKRSLCDGQWHSVTVSIKQH 3251
Query: 101 SGKLKID-------GQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFV 153
+ L++D GQ+ S + G ++GGVP L L + ++F
Sbjct: 3252 TLHLELDTYNSYTAGQL--------SFPPNSTRGSLHIGGVPDKLKMLT---LPVWNSFF 3300
Query: 154 GCLRNLKSNN 163
GCL+N++ N+
Sbjct: 3301 GCLKNIQVNH 3310
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 36/216 (16%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMAL--------SSGDKLILDG-------EWHTVEFSRQ 98
DY+ + V DGQ+ +N G G + S + ++D ++ + ++++
Sbjct: 2446 DYIGMAVVDGQLTCVYNLGDGEAEVQIDQVLTESESQEAVMDRVKSQRIYQFAKLNYTKE 2505
Query: 99 QLSGKLKIDGQVVAEGESKGSSKTLNI---FGPFYLGGVPLNTSTLVR-------GNLGL 148
S K K G V + ES S+ LN+ FY+GG P R G + L
Sbjct: 2506 ATSTKPKAPG--VYDMESASSNTLLNLDPENAVFYVGGYPPGFELPRRLRFPPYKGCIEL 2563
Query: 149 ND--TFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGVFFYNSGGYVKGVEQFRVGR 205
+D V L N K+ L ++ V PC K ES ++ GY + Q
Sbjct: 2564 DDLNENVLSLYNFKTTFNL-----NTTEVEPCRRRKEESDKNYFEGTGYARIPTQPNAPF 2618
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSV 241
+L ++ GLL ++ ++ L + DG++
Sbjct: 2619 P-KLSWTIQTTVDRGLLFFAENQDNFISLNIEDGNL 2653
>sp|Q4VBE4|EGFLA_MOUSE Pikachurin OS=Mus musculus GN=Egflam PE=1 SV=1
Length = 1017
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 152/373 (40%), Gaps = 70/373 (18%)
Query: 15 IEYPTITGR-------FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDG 63
I+YP G KN + F + ++ +E +DG++ Y + +H D+++L +
Sbjct: 386 IQYPQFFGHSYVTFEPLKNSYQAFQVTLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRR 445
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+H+ FNCG+G + S K+ L G WHTV R L+G L+++ G+S+G +
Sbjct: 446 SLHFRFNCGTGIAIIISETKIKL-GAWHTVTLYRDGLNGMLQLNNGTPVTGQSQGQYSKI 504
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDK-------------- 169
P YLGG P + LVR G N F GC+++L N K + +
Sbjct: 505 TFRTPLYLGGAP-SAYWLVRAT-GTNRGFQGCVQSLSVNGKKIDMRPWPLGKALNGADVG 562
Query: 170 HTSSGVI---------PCSD-KTESGVFFYNSG--------GYVKGVEQFRVGRE----- 206
SSG+ C+ K +S + G + + QFR
Sbjct: 563 ECSSGICDEASCIHGGTCAAIKADSYICLCPLGFRGRHCEDAFALTIPQFRESLRSYAAT 622
Query: 207 ------------MELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPI 252
E ++ +P + G+LL + KD+ + M G V+ D G G
Sbjct: 623 PWPLEPQHYLSFTEFEITFRPDSGDGVLLYSYDTGSKDFLSINMAAGHVEFRFDCGSG-- 680
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG 312
+ + P GQWH + +T + VD + G+ G ++ N +FIG
Sbjct: 681 TGVLRSEAPLTL--GQWHDLRVSRTAKNGILQVDKQKVVE-GMAEGGFTQIKCNTDIFIG 737
Query: 313 GHPFLSLSSKKSG 325
G P K SG
Sbjct: 738 GVPNYDDVKKNSG 750
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 145/355 (40%), Gaps = 72/355 (20%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+F I + S DG++ Y D D++++ + G + + F+CGSG L S L L G
Sbjct: 636 EFEITFRPDS-GDGVLLYSYDTGSKDFLSINMAAGHVEFRFDCGSGTGVLRSEAPLTL-G 693
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGL 148
+WH + SR +G L++D Q V EG ++G + ++GGVP V+ N G+
Sbjct: 694 QWHDLRVSRTAKNGILQVDKQKVVEGMAEGGFTQIKCNTDIFIGGVP--NYDDVKKNSGI 751
Query: 149 NDTFVGCLRNLKSNNKLVQDKHT-SSGV-----------IPCSD---------------- 180
F G ++ + N++ + KH +SGV PC+
Sbjct: 752 LHPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAHPCVGAPCAHGGSCRPRKEGYECDCP 811
Query: 181 --------KTESGVFFYNSGGYVKGVEQF---------------RV-GREMELKMDVKPR 216
+ E G N+ + QF RV G M K
Sbjct: 812 LGFEGLNCQKECGNHCLNTIIEAIEIPQFIGRSYLTYDNPNILKRVSGSRSNAFMRFKTT 871
Query: 217 NISGLLL-----SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHT 271
GLLL + D+ L + DG++ + + G G S + S F DG+WH
Sbjct: 872 AKDGLLLWRGDSPMRPNSDFISLGLRDGALIFSYNLGSGVASIMVNGS----FSDGRWHR 927
Query: 272 IVAIKTKNVISVAVD---SMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKK 323
+ A++ + VD + T PGL + + N A+++GG ++L + +
Sbjct: 928 VKAVRDGQSGKITVDDYGARTGKSPGL----MRQLNINGALYVGGMKEIALHTNR 978
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 23/160 (14%)
Query: 20 ITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPM 76
++G N F + KTT+ +DG++ + D + D+++L ++DG + +S+N GSG
Sbjct: 857 VSGSRSNAF---MRFKTTA-KDGLLLWRGDSPMRPNSDFISLGLRDGALIFSYNLGSGVA 912
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG--- 133
++ DG WH V+ R SGK+ +D G+S G + LNI G Y+GG
Sbjct: 913 SIMVNGSFS-DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGLMRQLNINGALYVGGMKE 971
Query: 134 VPLNTS-TLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTS 172
+ L+T+ +RG VGC+ S+ L D H S
Sbjct: 972 IALHTNRQYLRG-------LVGCI----SHFTLSTDYHIS 1000
>sp|B4F785|EGFLA_RAT Pikachurin OS=Rattus norvegicus GN=Egflam PE=2 SV=1
Length = 1005
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 153/373 (41%), Gaps = 70/373 (18%)
Query: 15 IEYPTITGR-------FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDG 63
I+YP G KN + F I ++ +E +DG++ Y + +H D+++L +
Sbjct: 382 IQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRR 441
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+H+ FNCG+G MA+ + I G WH+V R L+G L+++ G+S+G +
Sbjct: 442 SLHFRFNCGTG-MAIIISETKIKLGAWHSVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKI 500
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDK-------------- 169
P YLGG P + LVR G N F GC+++L N K + +
Sbjct: 501 TFRTPLYLGGAP-SAYWLVRAT-GTNRGFQGCVQSLAVNGKKIDMRPWPLGKALNGADVG 558
Query: 170 HTSSGVI---------PCSD-KTESGVFFYNSG--------GYVKGVEQFRVGRE----- 206
SSG+ C+ K +S + G + + QFR
Sbjct: 559 ECSSGICDEASCINGGTCAAIKADSYICLCPLGFRGRHCEDAFTLTIPQFRESLRSYAAT 618
Query: 207 ------------MELKMDVKPRNISGLLLSVH--SKKDYFILQMIDGSVKATVDNGKGPI 252
E ++ +P + G+LL + S KD+ + M G V+ D G G
Sbjct: 619 PWPLEPQHYLSFTEFEITFRPDSGDGVLLYSYDTSSKDFLSIIMAAGHVEFRFDCGSG-- 676
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG 312
+ + D GQWH + +T + VD + G+ G ++ N +FIG
Sbjct: 677 TGVLRSEDTLTL--GQWHDLRVSRTAKNGILQVDKQKVVE-GMAEGGFTQIKCNTDIFIG 733
Query: 313 GHPFLSLSSKKSG 325
G P K SG
Sbjct: 734 GVPNYDDVKKNSG 746
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 66/348 (18%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+F I + S DG++ Y D D++++ + G + + F+CGSG L S D L L G
Sbjct: 632 EFEITFRPDS-GDGVLLYSYDTSSKDFLSIIMAAGHVEFRFDCGSGTGVLRSEDTLTL-G 689
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGL 148
+WH + SR +G L++D Q V EG ++G + ++GGVP V+ N G+
Sbjct: 690 QWHDLRVSRTAKNGILQVDKQKVVEGMAEGGFTQIKCNTDIFIGGVP--NYDDVKKNSGI 747
Query: 149 NDTFVGCLRNLKSNNKLVQDKHT-SSGV-----------IPCS----------------- 179
F G ++ + N++ + +H +SGV PC+
Sbjct: 748 LHPFSGSIQKIILNDRTIHVRHDFTSGVNVENAAHPCVGAPCAHGGSCRPRKEGYECDCP 807
Query: 180 -------------DKTESGVFF------YNSGGYVKGVEQFRVGREMELKMDVKPRNISG 220
+ E F Y++ +K V R M K K G
Sbjct: 808 LGFEGLNCQKAITEAIEIPQFIGRSYLTYDNPNILKRVSGSRSNAFMRFKTTAK----DG 863
Query: 221 LLL-----SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAI 275
LLL + D+ L + DG++ + + G G S + S F DG+WH + A+
Sbjct: 864 LLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGS----FSDGRWHRVKAV 919
Query: 276 KTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKK 323
+ + VD + G P + + N A+++GG ++L + +
Sbjct: 920 RDGQSGKITVDDYGA-RTGKSPGMMRQLNINGALYVGGMKEIALRTNR 966
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 20 ITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPM 76
++G N F + KTT+ +DG++ + D + D+++L ++DG + +S+N GSG
Sbjct: 845 VSGSRSNAF---MRFKTTA-KDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVA 900
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
++ DG WH V+ R SGK+ +D G+S G + LNI G Y+GG+
Sbjct: 901 SIMVNGSFS-DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM-- 957
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTS 172
+R N VGC+ S+ L D H S
Sbjct: 958 -KEIALRTNRQYMRGLVGCI----SHFTLSTDYHIS 988
>sp|A3KN33|EGFLA_BOVIN Pikachurin OS=Bos taurus GN=EGFLAM PE=2 SV=1
Length = 1018
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 152/373 (40%), Gaps = 70/373 (18%)
Query: 15 IEYPTITGR-------FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDG 63
I+YP G KN + F I ++ +E +DG++ Y + +H D+++L V
Sbjct: 395 IQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEHGRGDFMSLAVIRR 454
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+ + FNCG+G + S K+ L G WHTV R L+G L+++ G+S+G +
Sbjct: 455 SLQFRFNCGTGVAIIVSETKIKLGG-WHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKI 513
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDK-------------- 169
P YLGG P + LVR G N F GC++ L N K + +
Sbjct: 514 TFRTPLYLGGAP-SAYWLVRAT-GTNRGFQGCVQALTVNGKRLDLRPWPLGKALSGADVG 571
Query: 170 HTSSGVI---PC-------SDKTESGVFFYNSG--------GYVKGVEQFRVGRE----- 206
SSG+ C + K +S + G + + QF+
Sbjct: 572 ECSSGICDEASCINGGTCMASKADSYICLCPLGFRGRHCEDAFTLTIPQFKESLRSYAAT 631
Query: 207 ------------MELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPI 252
ME ++ +P + G+LL + KD+ + M G V+ D G G
Sbjct: 632 PWPLEPRHYLSFMEFEVTFRPDSEDGVLLYSYDTGSKDFLSINMAGGHVEFRFDCGSG-- 689
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG 312
+ + +P G WH + +T + VD + G+ G ++ N+ +FIG
Sbjct: 690 TGVLRSEEPLTL--GHWHELCVSRTAKNGILQVDKQKAVE-GMAEGGFTQIKCNSDIFIG 746
Query: 313 GHPFLSLSSKKSG 325
G P K SG
Sbjct: 747 GVPNYDDVKKNSG 759
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 146/363 (40%), Gaps = 72/363 (19%)
Query: 17 YPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM 76
+P + + +F + + SE DG++ Y D D++++ + G + + F+CGSG
Sbjct: 633 WPLEPRHYLSFMEFEVTFRPDSE-DGVLLYSYDTGSKDFLSINMAGGHVEFRFDCGSGTG 691
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
L S + L L G WH + SR +G L++D Q EG ++G + ++GGVP
Sbjct: 692 VLRSEEPLTL-GHWHELCVSRTAKNGILQVDKQKAVEGMAEGGFTQIKCNSDIFIGGVP- 749
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKH-------TSSGVIPC----------- 178
V+ N G+ F G ++ + N++ + KH + PC
Sbjct: 750 -NYDDVKKNSGILKPFSGSIQKIILNDRTIHVKHDFTWGVNVENAAHPCVGSPCAHGGSC 808
Query: 179 ------------------------SDKTESGVFF------YNSGGYVKGVEQFRVGREME 208
++ E F Y++ +K V R M
Sbjct: 809 RPRKEGYECDCPLGFEGLHCQKAITEAIEIPQFIGRSYLTYDNPDILKRVSGSRSNAFMR 868
Query: 209 LKMDVKPRNISGLLL-----SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYF 263
K K GLLL + D+ L + DG++ + + G G S + S
Sbjct: 869 FKTTAK----DGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGS---- 920
Query: 264 FCDGQWHTIVAIKTKNVISVAVD---SMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLS 320
F DG+WH + A++ + VD + T PG+ + + N A+++GG ++L
Sbjct: 921 FNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGM----MRQLNINGALYVGGMKEIALH 976
Query: 321 SKK 323
+ +
Sbjct: 977 TNR 979
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 20 ITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPM 76
++G N F + KTT+ +DG++ + D + D+++L ++DG + +S+N GSG
Sbjct: 858 VSGSRSNAF---MRFKTTA-KDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVA 913
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
++ DG WH V+ R SGK+ +D G+S G + LNI G Y+GG+
Sbjct: 914 SIMVNGSFN-DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM-- 970
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTS 172
+ N VGC+ S+ L D H S
Sbjct: 971 -KEIALHTNRQYMRGLVGCI----SHFTLSTDYHIS 1001
>sp|Q63HQ2|EGFLA_HUMAN Pikachurin OS=Homo sapiens GN=EGFLAM PE=1 SV=2
Length = 1017
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 152/375 (40%), Gaps = 74/375 (19%)
Query: 15 IEYPTITGR-------FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDG 63
I+YP G KN + F I ++ +E +DG++ Y + +H D+++L +
Sbjct: 386 IQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEHGRGDFMSLAIIRR 445
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+ + FNCG+G + S K+ L G WHTV R L+G L+++ G+S+G +
Sbjct: 446 SLQFRFNCGTGVAIIVSETKIKLGG-WHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKI 504
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDK-------------- 169
P YLGG P + LVR G N F GC+++L N + + +
Sbjct: 505 TFRTPLYLGGAP-SAYWLVRAT-GTNRGFQGCVQSLAVNGRRIDMRPWPLGKALSGADVG 562
Query: 170 HTSSGVIPCSD------------KTESGVFFYNSG--------GYVKGVEQFRVGRE--- 206
SSG+ C + K +S + G + + QFR
Sbjct: 563 ECSSGI--CDEASCIHGGTCTAIKADSYICLCPLGFKGRHCEDAFTLTIPQFRESLRSYA 620
Query: 207 --------------MELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKG 250
ME ++ +P + G+LL + KD+ + + G V+ D G G
Sbjct: 621 ATPWPLEPQHYLSFMEFEITFRPDSGDGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSG 680
Query: 251 PISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVF 310
+ + DP G WH + +T + VD + G+ G ++ N +F
Sbjct: 681 --TGVLRSEDPLTL--GNWHELRVSRTAKNGILQVDKQKIVE-GMAEGGFTQIKCNTDIF 735
Query: 311 IGGHPFLSLSSKKSG 325
IGG P K SG
Sbjct: 736 IGGVPNYDDVKKNSG 750
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 149/364 (40%), Gaps = 66/364 (18%)
Query: 17 YPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM 76
+P + + +F I + S DG++ Y D D++++ + G + + F+CGSG
Sbjct: 624 WPLEPQHYLSFMEFEITFRPDS-GDGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSGTG 682
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
L S D L L G WH + SR +G L++D Q + EG ++G + ++GGVP
Sbjct: 683 VLRSEDPLTL-GNWHELRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVP- 740
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT-SSGV-----------IPCSD---- 180
V+ N G+ F G ++ + N++ + KH +SGV PC+
Sbjct: 741 -NYDDVKKNSGVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAHPCVRAPCAHGGSC 799
Query: 181 --------------------KTESGVFFYNSGGYVKGVEQF---------------RV-G 204
+ E G + N+ + QF RV G
Sbjct: 800 RPRKEGYDCDCPLGFEGLHCQKECGNYCLNTIIEAIEIPQFIGRSYLTYDNPDILKRVSG 859
Query: 205 REMELKMDVKPRNISGLLL-----SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPS 259
+ M K GLLL + D+ L + DG++ + + G G S + S
Sbjct: 860 SRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGS 919
Query: 260 DPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSL 319
F DG+WH + A++ + VD + G P + + N A+++GG ++L
Sbjct: 920 ----FNDGRWHRVKAVRDGQSGKITVDDYGA-RTGKSPGMMRQLNINGALYVGGMKEIAL 974
Query: 320 SSKK 323
+ +
Sbjct: 975 HTNR 978
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 37 TSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTV 93
T+ +DG++ + D + D+++L ++DG + +S+N GSG ++ DG WH V
Sbjct: 870 TTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFN-DGRWHRV 928
Query: 94 EFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFV 153
+ R SGK+ +D G+S G + LNI G Y+GG+ + N V
Sbjct: 929 KAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM---KEIALHTNRQYMRGLV 985
Query: 154 GCLRNLKSNNKLVQDKHTS 172
GC+ S+ L D H S
Sbjct: 986 GCI----SHFTLSTDYHIS 1000
>sp|P25304|AGRIN_RAT Agrin OS=Rattus norvegicus GN=Agrn PE=1 SV=2
Length = 1959
Score = 84.3 bits (207), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG 72
S + +PT+ R + +++ + E +G++ Y + + D++AL + DG++ + F+ G
Sbjct: 1272 SFLAFPTL--RAYHTLRLALEFRAL-ETEGLLLYNGNARGKDFLALALLDGRVQFRFDTG 1328
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SGP L+S + G WH +E SR G L +DG+ GES + LN+ Y+G
Sbjct: 1329 SGPAVLTSLVP-VEPGRWHRLELSRHWRQGTLSVDGETPVVGESPSGTDGLNLDTNLYVG 1387
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKH------TSSGVIPCSD 180
G+P +V + GC+R L NN+ ++ SSGV C D
Sbjct: 1388 GIPEEQVAMVLDRTSVGVGLKGCIRMLDINNQQLELSDWQRAAVQSSGVGECGD 1441
Score = 58.2 bits (139), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
F + ++T + Q +++ + DY+AL + DG + S++ GS P+ L S K +
Sbjct: 1807 FELSLRTEATQGLVLWIGKAAERADYMALAIVDGHLQLSYDLGSQPVVLRSTVK-VNTNR 1865
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG---VPLNTSTLVRGNL 146
W + R+ G L++ + G S + L+ G +LGG +P+ +
Sbjct: 1866 WLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYGT 1925
Query: 147 GLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC 178
G FVGCLR++ ++ L++D T + PC
Sbjct: 1926 G----FVGCLRDVVVGHRQLHLLEDAVTKPELRPC 1956
Score = 44.3 bits (103), Expect = 0.001, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-DGQVVA 112
D+V+L + + + + ++ G G + S + + L G W V R G L++ DG V
Sbjct: 1580 DFVSLALHNRHLEFCYDLGKGAAVIRSKEPIAL-GTWVRVFLERNGRKGALQVGDGPRVL 1638
Query: 113 EGESKGSSKT----LNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR--NLKSNNKLV 166
GES S K LN+ P Y+GG P + S L RG ++ F G ++ +L+ + L
Sbjct: 1639 -GESPKSRKVPHTMLNLKEPLYIGGAP-DFSKLARG-AAVSSGFSGVIQLVSLRGHQLLT 1695
Query: 167 QD 168
Q+
Sbjct: 1696 QE 1697
Score = 41.6 bits (96), Expect = 0.009, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 201 FRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDNGKGP-ISAIYT 257
R + L ++ + GLLL + KD+ L ++DG V+ D G GP +
Sbjct: 1279 LRAYHTLRLALEFRALETEGLLLYNGNARGKDFLALALLDGRVQFRFDTGSGPAVLTSLV 1338
Query: 258 PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
P +P G+WH + + +++VD T G P G+ + + +++GG P
Sbjct: 1339 PVEP-----GRWHRLELSRHWRQGTLSVDG-ETPVVGESPSGTDGLNLDTNLYVGGIP 1390
>sp|A2ASQ1|AGRIN_MOUSE Agrin OS=Mus musculus GN=Agrn PE=1 SV=1
Length = 1950
Score = 82.4 bits (202), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG 72
S + +PT+ R + +++ + E +G++ Y + + D++AL + DG + + F+ G
Sbjct: 1263 SFLAFPTL--RAYHTLRLALEFRAL-ETEGLLLYNGNARGKDFLALALLDGHVQFRFDTG 1319
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SGP L+S + G WH +E SR G L +DG+ GES + LN+ Y+G
Sbjct: 1320 SGPAVLTSLVP-VEPGRWHRLELSRHWRQGTLSVDGEAPVVGESPSGTDGLNLDTKLYVG 1378
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKH------TSSGVIPCSD 180
G+P V + GC+R L NN+ ++ SSGV C D
Sbjct: 1379 GLPEEQVATVLDRTSVGIGLKGCIRMLDINNQQLELSDWQRAVVQSSGVGECGD 1432
Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 30 FSIDIKTTSEQDGIIFYVADV-KHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
F + ++T + Q G++ ++ V + DY+AL + DG + S++ GS P+ L S K +
Sbjct: 1798 FELSLRTEATQ-GLVLWIGKVGERADYMALAIVDGHLQLSYDLGSQPVVLRSTVK-VNTN 1855
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG---VPLNTSTLVRGN 145
W V R+ G L++ + G S + L+ G +LGG +P+ +
Sbjct: 1856 RWLRVRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYG 1915
Query: 146 LGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC 178
G FVGCLR++ ++ L++D T + PC
Sbjct: 1916 TG----FVGCLRDVVVGHRQLHLLEDAVTKPELRPC 1947
Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-DGQVVA 112
D+V+L + + + + ++ G G + S + + L G W V R G L++ DG V
Sbjct: 1571 DFVSLALHNRHLEFRYDLGKGAAIIRSKEPIAL-GTWVRVFLERNGRKGALQVGDGPRVL 1629
Query: 113 EGESKGSSKT----LNIFGPFYLGGVPLNTSTLVRG 144
GES S K LN+ P Y+GG P + S L RG
Sbjct: 1630 -GESPKSRKVPHTMLNLKEPLYVGGAP-DFSKLARG 1663
Score = 41.2 bits (95), Expect = 0.013, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 201 FRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDNGKGP-ISAIYT 257
R + L ++ + GLLL + KD+ L ++DG V+ D G GP +
Sbjct: 1270 LRAYHTLRLALEFRALETEGLLLYNGNARGKDFLALALLDGHVQFRFDTGSGPAVLTSLV 1329
Query: 258 PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLG--PPGSSETDTNNAVFIGGHP 315
P +P G+WH + + +++VD + P +G P G+ + + +++GG P
Sbjct: 1330 PVEP-----GRWHRLELSRHWRQGTLSVDG---EAPVVGESPSGTDGLNLDTKLYVGGLP 1381
Score = 32.0 bits (71), Expect = 7.1, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
Query: 209 LKMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGKGPI---SAIYTPSDPY 262
++ ++ GL+L V + DY L ++DG ++ + D G P+ S + ++
Sbjct: 1798 FELSLRTEATQGLVLWIGKVGERADYMALAIVDGHLQLSYDLGSQPVVLRSTVKVNTN-- 1855
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKP--GLGPPGSSETDTNNAVFIGG 313
+W + A + S+ V + + P G P G+++ DT+ A+++GG
Sbjct: 1856 -----RWLRVRAHREHREGSLQVGN---EAPVTGSSPLGATQLDTDGALWLGG 1900
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 80.9 bits (198), Expect = 1e-14, Method: Composition-based stats.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 34/299 (11%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK-HIDYVALYVKDGQIH 66
G S SS +E+ I R +N S+ + S + G++ + A ++ +AL++ +G
Sbjct: 3344 GGSLSSHLEFVGILARHRNWPSLSMHVLPRSSR-GLLLFTARLRPGSPSLALFLSNGHFV 3402
Query: 67 YSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVV---------AEGESK 117
G G + + G WH V ++ L DG +G
Sbjct: 3403 AQME-GLGTRLRAQSRQRSRPGRWHKVSVRWEKNRILLVTDGARAWSQEGPHRQHQGAEH 3461
Query: 118 GSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIP 177
TL ++GG+P ++ + L + F GC++ L+ + + + +GV P
Sbjct: 3462 PQPHTL------FVGGLPASSHS---SKLPVTVGFSGCVKRLRLHGRPLGAPTRMAGVTP 3512
Query: 178 CS-DKTESGVFFYNSGGYVK----GVEQFRVGREMELKMDVKPRNISGLLLSVHSKKD-- 230
C E+G+FF SGG + G VG E+E V+P ++GL+ + +
Sbjct: 3513 CILGPLEAGLFFPGSGGVITLDLPGATLPDVGLELE----VRPLAVTGLIFHLGQARTPP 3568
Query: 231 YFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMT 289
Y LQ+ + V D+G G S T P CDGQWH + +K+ NV+ + VD+ +
Sbjct: 3569 YLQLQVTEKQVLLRADDGAGEFSTSVT--RPSVLCDGQWHRLAVMKSGNVLRLEVDAQS 3625
Score = 38.5 bits (88), Expect = 0.071, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 104/244 (42%), Gaps = 27/244 (11%)
Query: 40 QDGIIFYVADVKHI-DYVALYVKDGQIHYSFNCG-SGPMALS----SGDKLILDGEWHTV 93
+D + Y+ + DY+ + ++D ++H+ + G +GP LS G++ T+
Sbjct: 2778 EDRFVMYMGSRQATGDYMGVSLRDKKVHWVYQLGEAGPAVLSIDEDIGEQFAAVSLDRTL 2837
Query: 94 EFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGP---FYLGGVPLNTSTLVRGNLGLND 150
+F ++ + ++ + + + G+ LN+ FY+GG P ST L
Sbjct: 2838 QFGHMSVTVERQMIQETKGDTVAPGAEGLLNLRPDDFVFYVGGYP---STFTPPPLLRFP 2894
Query: 151 TFVGCLRNLKSNNKLV------QDKHTSSGV-IPCSDKTESGVFFYNSGGYVKGVEQFRV 203
+ GC+ N ++V + + V PC+ +G + G Y+ G R+
Sbjct: 2895 GYRGCIEMDTLNEEVVSLYNFERTFQLDTAVDRPCARSKSTGDPWLTDGSYLDGTGFARI 2954
Query: 204 GREMEL------KMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYT 257
+ ++ + +++ + SG+L + + + L + +GS+ D G G A+
Sbjct: 2955 SFDSQISTTKRFEQELRLVSYSGVLFFLKQQSQFLCLAVQEGSLVLLYDFGAGLKKAV-- 3012
Query: 258 PSDP 261
P P
Sbjct: 3013 PLQP 3016
>sp|O00468|AGRIN_HUMAN Agrin OS=Homo sapiens GN=AGRN PE=1 SV=5
Length = 2067
Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG 72
S + +PT+ R + +++ + Q G++ Y + + D++AL + DG++ F+ G
Sbjct: 1381 SFLAFPTL--RAYHTLRLALEFRALEPQ-GLLLYNGNARGKDFLALALLDGRVQLRFDTG 1437
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SGP L+S + G+WH +E SR G L +DG+ GES + LN+ ++G
Sbjct: 1438 SGPAVLTSAVP-VEPGQWHRLELSRHWRRGTLSVDGETPVLGESPSGTDGLNLDTDLFVG 1496
Query: 133 GVPLNTSTLVRGNLGLNDTFV-----GCLRNLKSNNKLVQ------DKHTSSGVIPCSD 180
GVP + + + L TFV GC+R L NN+ ++ SGV C D
Sbjct: 1497 GVPEDQAA-----VALERTFVGAGLRGCIRLLDVNNQRLELGIGPGAATRGSGVGECGD 1550
Score = 62.4 bits (150), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
F + ++T + Q +++ + DYVAL + DG + S+N GS P+ L S +
Sbjct: 1915 FELSLRTEATQGLVLWSGKATERADYVALAIVDGHLQLSYNLGSQPVVLRSTVP-VNTNR 1973
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLGL 148
W V R+Q G L++ + G S + L+ G +LGG+P L + G
Sbjct: 1974 WLRVVAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLPELPVGPALPKAYGT 2033
Query: 149 NDTFVGCLRNL---KSNNKLVQDKHTSSGVIPC 178
FVGCLR++ + L++D T + PC
Sbjct: 2034 G--FVGCLRDVVVGRHPLHLLEDAVTKPELRPC 2064
Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-DGQVVA 112
D+V+L ++D ++ + ++ G G + S + + L G W V R G L++ DG V
Sbjct: 1689 DFVSLALRDRRLEFRYDLGKGAAVIRSREPVTL-GAWTRVSLERNGRKGALRVGDGPRVL 1747
Query: 113 EGESKGSSK----TLNIFGPFYLGGVPLNTSTLVRG 144
GES S K LN+ P Y+GG P + S L R
Sbjct: 1748 -GESPKSRKVPHTVLNLKEPLYVGGAP-DFSKLARA 1781
Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 201 FRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDNGKGPISAIYT- 257
R + L ++ + GLLL + KD+ L ++DG V+ D G GP A+ T
Sbjct: 1388 LRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALALLDGRVQLRFDTGSGP--AVLTS 1445
Query: 258 --PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLG--PPGSSETDTNNAVFIGG 313
P +P GQWH + + +++VD T P LG P G+ + + +F+GG
Sbjct: 1446 AVPVEP-----GQWHRLELSRHWRRGTLSVDGET---PVLGESPSGTDGLNLDTDLFVGG 1497
Query: 314 HP 315
P
Sbjct: 1498 VP 1499
Score = 33.9 bits (76), Expect = 1.7, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 14/115 (12%)
Query: 209 LKMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYT-PSDPYFF 264
++ ++ GL+L + DY L ++DG ++ + + G P+ T P +
Sbjct: 1915 FELSLRTEATQGLVLWSGKATERADYVALAIVDGHLQLSYNLGSQPVVLRSTVPVNT--- 1971
Query: 265 CDGQWHTIVAIKTKNVISVAVDSMTTDKP--GLGPPGSSETDTNNAVFIGGHPFL 317
+W +VA + + S+ V + + P G P G+++ DT+ A+++GG P L
Sbjct: 1972 --NRWLRVVAHREQREGSLQVGN---EAPVTGSSPLGATQLDTDGALWLGGLPEL 2021
>sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=2
Length = 5193
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 131/295 (44%), Gaps = 30/295 (10%)
Query: 43 IIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD---KLILDGEWHTVEFSRQQ 99
I+ ++ +Y L +K+G+ ++ +N + ++ D + DGEWH + R Q
Sbjct: 1548 ILLALSPGDQEEYFTLQLKNGRPYFLYNSQGTLVEVTPTDDPSQGYRDGEWHEIIAVRHQ 1607
Query: 100 LSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNL 159
G++ +DGQ S S + ++GGVP S L + + FVGCL+++
Sbjct: 1608 AFGQITLDGQYTGSSSSLNGSSVTGGYTGLFVGGVPQGHSVLQKRLEIIQRGFVGCLKDV 1667
Query: 160 -------KSNNKLVQDKHTSS---GVIP----CSDKTESGVFFYNSGGYVKGVEQFRVGR 205
S L D +S V P C E GV F +G + F +
Sbjct: 1668 FIMKGYSPSGTWLPLDWQSSEEQVNVHPSWEGCPTNLEEGVQFLGAGFLELPSDTFHAAK 1727
Query: 206 EMELKMDVKPRNISGLLLSVHSKK--DYFILQMIDGSVKATVDNGKGPISAIYTPSDPYF 263
+ E+ + + ++GLLL +H+ + D+ +++ G + ++ S ++T D
Sbjct: 1728 DFEISLKFQTDQLNGLLLFIHNTEGPDFLAVELKRGLLSFKFNS-----SLVFTRVDLRL 1782
Query: 264 F---CDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
CDG+W+T+ K +V+SV V+++ K G N+ V++GG P
Sbjct: 1783 GLADCDGKWNTVSIKKEGSVVSVRVNAL---KKSTSQAGGQPLLVNSPVYLGGIP 1834
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 215 PRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDP-YFFCDGQWHTIV 273
P + L LS +++YF LQ+ +G + N +G + + DP + DG+WH I+
Sbjct: 1544 PEGLILLALSPGDQEEYFTLQLKNGR-PYFLYNSQGTLVEVTPTDDPSQGYRDGEWHEII 1602
Query: 274 AIKTKNVISVAVDSMTT 290
A++ + + +D T
Sbjct: 1603 AVRHQAFGQITLDGQYT 1619
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 76.6 bits (187), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Query: 37 TSEQDGIIFYVADVKHI----DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHT 92
TS DG++ + V+ D+++L ++DG + +S+ GSG L SGD I DGEWH
Sbjct: 3553 TSTADGLLLWQGVVREASRSKDFISLGLQDGHLVFSYQLGSGEARLVSGDP-INDGEWHR 3611
Query: 93 VEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
+ R+ G +++DG+ + G S G + +N Y+GG P + +TL RG +
Sbjct: 3612 ITALREGQRGSIQVDGEDLVTGRSPGPNVAVNTKDIIYIGGAP-DVATLTRGK--FSSGI 3668
Query: 153 VGCLRNL 159
GC++NL
Sbjct: 3669 TGCIKNL 3675
Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
D+V+L + G + + + GSG L S + L L G WH V R G L++DG
Sbjct: 3295 DFVSLAMVGGHLEFRYELGSGLAVLRSHEPLAL-GRWHRVSAERLNKDGSLRVDGGRPVL 3353
Query: 114 GESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT-- 171
S G S+ LN+ YLGGV S + ++ F GC+ + N K + ++
Sbjct: 3354 RSSPGKSQGLNLHTLLYLGGV--EPSVQLSPATNMSAHFHGCVGEVSVNGKRLDLTYSFL 3411
Query: 172 -SSGVIPCSDKT 182
S GV C D +
Sbjct: 3412 GSQGVGQCYDSS 3423
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK--------HIDYVALYVKDGQ 64
S + PTI ++ KF+ I + S DG++ Y + D+++ + G+
Sbjct: 2993 SFLPLPTIKDAYR-KFEIKITFRPDS-ADGMLLYNGQKRSPTNLANRQPDFISFGLVGGR 3050
Query: 65 IHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLN 124
+ F+ GSG + L L G++HTV R G L + G S+G + L+
Sbjct: 3051 PEFRFDAGSGMATIRHPTPLAL-GQFHTVTLLRSLTQGSLIVGNLAPVNGTSQGKFQGLD 3109
Query: 125 IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLK 160
+ YLGG P + + + GL+ FVGC+R L+
Sbjct: 3110 LNEELYLGGYP-DYGAIPKA--GLSSGFVGCVRELR 3142
Score = 39.7 bits (91), Expect = 0.032, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 22/146 (15%)
Query: 183 ESGVFFYNSGGYVKGVEQFRVGREM-----ELKMDVKPRNISGLLL------SVHSKKDY 231
+ G +FY++G G+ R + ++ +V+ GLLL KD+
Sbjct: 3518 QYGAYFYDNG--FLGLPGNSFSRSLPEVPETIEFEVRTSTADGLLLWQGVVREASRSKDF 3575
Query: 232 FILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD--SMT 289
L + DG + + G G A DP DG+WH I A++ S+ VD +
Sbjct: 3576 ISLGLQDGHLVFSYQLGSG--EARLVSGDP--INDGEWHRITALREGQRGSIQVDGEDLV 3631
Query: 290 TDKPGLGPPGSSETDTNNAVFIGGHP 315
T G P + +T + ++IGG P
Sbjct: 3632 T---GRSPGPNVAVNTKDIIYIGGAP 3654
>sp|Q9CS84|NRX1A_MOUSE Neurexin-1 OS=Mus musculus GN=Nrxn1 PE=1 SV=3
Length = 1514
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 155/382 (40%), Gaps = 93/382 (24%)
Query: 30 FSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT E +G+I + D KH +D+ A+ + DG ++ + GSG +
Sbjct: 511 ISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIK 569
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLGG+P N
Sbjct: 570 IKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLGGLPEN 628
Query: 138 TSTLV----RGNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGVIP-CSDKT----- 182
+ LV LN +VGC+R+L + + + + +++GV P CS +T
Sbjct: 629 KAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSKETAKPCL 688
Query: 183 ---------------------------------ESGVFFYNSGGYVKGVEQFRVGREME- 208
E+ V Y+ ++K + E E
Sbjct: 689 SNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAED 748
Query: 209 LKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATV---------DNGKGPISAIYT 257
+ + + + G+L++ S+ D L++ G VK TV ++ KGP +
Sbjct: 749 VSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAG 808
Query: 258 PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFL 317
Y D +WHT+ ++ + + VD + G H L
Sbjct: 809 ----YNLNDNEWHTVRVVRRGKSLKLTVD---------------DQQAMTGQMAGDHTRL 849
Query: 318 SLSSKKSGPRTKRRSVFLINAN 339
+ ++G T+RR + + +N
Sbjct: 850 EFHNIETGIITERRYLSSVPSN 871
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 124/320 (38%), Gaps = 49/320 (15%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 745 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 798
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLN------- 124
GP L +G L D EWHTV R+ S KL +D Q G+ G L
Sbjct: 799 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETG 857
Query: 125 -IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTE 183
I YL VP N F+G L++L N D + + C
Sbjct: 858 IITERRYLSSVPSN--------------FIGHLQSLTFNGMAYIDLCKNGDIDYCELNAR 903
Query: 184 SG--------VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFIL 234
G V F YV + + M L K ++ GL+L + D+ ++
Sbjct: 904 FGFRNIIADPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVV 962
Query: 235 QMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI-VAIKTKNVISVAVDSMTTDKP 293
+++ G + D G G + + P D QWH + ++ T N+ +V +D+ T +
Sbjct: 963 ELVKGYLHYVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI 1020
Query: 294 GLGPPGSSETDTNNAVFIGG 313
G+ D + ++IGG
Sbjct: 1021 ---TAGARNLDLKSDLYIGG 1037
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 132/325 (40%), Gaps = 58/325 (17%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G++ + K DYV L +K+G + N GSG + + D WH V+
Sbjct: 314 TLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK 371
Query: 95 FSR--QQLSG-------------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+R +Q SG + +DG + G ++ L FY+GG P S
Sbjct: 372 VTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---S 428
Query: 140 TLVRGNLGLNDTFVGCLRNLKSNNKLVQ-----------DKHTSSGVIP--CSDKTESGV 186
T +++ F+GCL+ + N V+ K GV+ C +
Sbjct: 429 TADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDP 488
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK--------------DYF 232
+ + + ++ + + D + +GL+L H K D+F
Sbjct: 489 ITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFF 548
Query: 233 ILQMIDGSVKATVDNGKG--PISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTT 290
++M+DG + +D G G I A+ + DG+W+ + + +++V+++ T
Sbjct: 549 AIEMLDGHLYLLLDMGSGTIKIKALQKKVN-----DGEWYHVDFQRDGRSGTISVNTLRT 603
Query: 291 DKPGLGPPGSSETDTNNAVFIGGHP 315
P P S D ++ +++GG P
Sbjct: 604 --PYTAPGESEILDLDDELYLGGLP 626
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 25/190 (13%)
Query: 13 SRIEYPTITGRFKN--------KFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDG 63
S +E+P G++ + + S +KT S + G++ Y D D++ L + + G
Sbjct: 29 SGLEFPGAEGQWTRFPKWNACCESEMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGG 87
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
++ SF+ A D + DG WH+V RQ + L ID E K + +
Sbjct: 88 RLQLSFSIFCAEPATLLADTPVNDGAWHSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDM 147
Query: 124 NIFGPFYLGGVPLNTST----LVRGNLGLNDTFVGCLRNLKSNN-----------KLVQD 168
+F ++GG+P L ++ + F G +R+++ N+ KL +
Sbjct: 148 TVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQALPVDGGEVKLDDE 207
Query: 169 KHTSSGVIPC 178
S G PC
Sbjct: 208 PPNSGGGSPC 217
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 918 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 973
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 974 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1031
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GGV T + + + F GCL ++ N +L
Sbjct: 1032 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRL 1069
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
DY+ L++ G+I FN G+ +A+ + +I DG++H V F+R + L++D V E
Sbjct: 1183 DYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIE 1242
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 307 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 365
Query: 268 QWHTI 272
WH +
Sbjct: 366 AWHDV 370
>sp|O88279|SLIT1_RAT Slit homolog 1 protein OS=Rattus norvegicus GN=Slit1 PE=1 SV=1
Length = 1531
Score = 72.4 bits (176), Expect = 5e-12, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI A+ + G + S++ GS P + + I DG++HTVE
Sbjct: 1192 STAEDNGILLYNGDNDHI---AVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1248
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN-TSTLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1249 VTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFH 1308
Query: 154 GCLRNLKSNNKLVQD---KHTSSGVIP 177
GC+RNL NN+L QD GV+P
Sbjct: 1309 GCIRNLYINNEL-QDFTKTQMKPGVVP 1334
Score = 41.2 bits (95), Expect = 0.013, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 209 LKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQ 268
+ + V +G+LL + D+ +++ G V+ + D G P SAIY+ DGQ
Sbjct: 1187 ITLQVSTAEDNGILL-YNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAET---INDGQ 1242
Query: 269 WHTIVAIKTKNVISVAVDS---MTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+HT+ + ++++++D MT D G +SE +++GG P
Sbjct: 1243 FHTVELVTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEA----PLYVGGMP 1288
>sp|Q80TR4|SLIT1_MOUSE Slit homolog 1 protein OS=Mus musculus GN=Slit1 PE=1 SV=2
Length = 1531
Score = 72.4 bits (176), Expect = 5e-12, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI A+ + G + S++ GS P + + I DG++HTVE
Sbjct: 1192 STAEDNGILLYNGDNDHI---AVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1248
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN-TSTLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1249 VTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFH 1308
Query: 154 GCLRNLKSNNKLVQD---KHTSSGVIP 177
GC+RNL NN+L QD GV+P
Sbjct: 1309 GCIRNLYINNEL-QDFTKTQMKPGVVP 1334
Score = 41.2 bits (95), Expect = 0.013, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 209 LKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQ 268
+ + V +G+LL + D+ +++ G V+ + D G P SAIY+ DGQ
Sbjct: 1187 ITLQVSTAEDNGILL-YNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAET---INDGQ 1242
Query: 269 WHTIVAIKTKNVISVAVDS---MTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+HT+ + ++++++D MT D G +SE +++GG P
Sbjct: 1243 FHTVELVTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEA----PLYVGGMP 1288
>sp|Q28146|NRX1A_BOVIN Neurexin-1 OS=Bos taurus GN=NRXN1 PE=1 SV=1
Length = 1530
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 155/382 (40%), Gaps = 93/382 (24%)
Query: 30 FSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT E +G+I + D KH +D+ A+ + DG ++ + GSG +
Sbjct: 527 ISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIK 585
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLGG+P N
Sbjct: 586 IKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESQILDLDDELYLGGLPEN 644
Query: 138 TSTLV----RGNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGVIP-CSDKT----- 182
+ LV LN +VGC+R+L + + + + +++GV P CS +T
Sbjct: 645 KAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCL 704
Query: 183 ---------------------------------ESGVFFYNSGGYVKGVEQFRVGREME- 208
E+ V Y+ ++K + E E
Sbjct: 705 SNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAED 764
Query: 209 LKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATV---------DNGKGPISAIYT 257
+ + + + G+L++ S+ D L++ G VK TV ++ KGP +
Sbjct: 765 VSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAG 824
Query: 258 PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFL 317
Y D +WHT+ ++ + + VD + G H L
Sbjct: 825 ----YNLNDNEWHTVRVVRRGKSLKLTVD---------------DQQAMTGQMAGDHTRL 865
Query: 318 SLSSKKSGPRTKRRSVFLINAN 339
+ ++G T+RR + + +N
Sbjct: 866 EFHNIETGIITERRYLSSVPSN 887
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 124/320 (38%), Gaps = 49/320 (15%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 761 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 814
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLN------- 124
GP L +G L D EWHTV R+ S KL +D Q G+ G L
Sbjct: 815 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETG 873
Query: 125 -IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTE 183
I YL VP N F+G L++L N D + + C
Sbjct: 874 IITERRYLSSVPSN--------------FIGHLQSLTFNGMAYIDLCKNGDIDYCELNAR 919
Query: 184 SG--------VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFIL 234
G V F YV + + M L K ++ GL+L + D+ ++
Sbjct: 920 FGFRNIIADPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVV 978
Query: 235 QMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI-VAIKTKNVISVAVDSMTTDKP 293
+++ G + D G G + + P D QWH + ++ T N+ +V +D+ T +
Sbjct: 979 ELVKGYLHYVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI 1036
Query: 294 GLGPPGSSETDTNNAVFIGG 313
G+ D + ++IGG
Sbjct: 1037 ---TAGARNLDLKSDLYIGG 1053
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 132/325 (40%), Gaps = 58/325 (17%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G++ + K DYV L +K+G + N GSG + + D WH V+
Sbjct: 330 TLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK 387
Query: 95 FSR--QQLSG-------------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+R +Q SG + +DG + G ++ L FY+GG P S
Sbjct: 388 VTRNLRQTSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---S 444
Query: 140 TLVRGNLGLNDTFVGCLRNLKSNNKLVQ-----------DKHTSSGVIP--CSDKTESGV 186
T +++ F+GCL+ + N V+ K GV+ C +
Sbjct: 445 TADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDP 504
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK--------------DYF 232
+ + + ++ + + D + +GL+L H K D+F
Sbjct: 505 ITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFF 564
Query: 233 ILQMIDGSVKATVDNGKG--PISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTT 290
++M+DG + +D G G I A+ + DG+W+ + + +++V+++ T
Sbjct: 565 AIEMLDGHLYLLLDMGSGTIKIKALQKKVN-----DGEWYHVDFQRDGRSGTISVNTLRT 619
Query: 291 DKPGLGPPGSSETDTNNAVFIGGHP 315
P P S D ++ +++GG P
Sbjct: 620 --PYTAPGESQILDLDDELYLGGLP 642
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Query: 13 SRIEYPTITGRFKN--------KFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG- 63
S +E+P G++ + + S +KT S + G++ Y D D++ L + G
Sbjct: 29 SGLEFPGAEGQWTRFPKWNACCESEMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGG 87
Query: 64 --QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSK 121
Q+ +S C L+ D + DG WH V RQ + L ID E K +
Sbjct: 88 RLQLSFSIFCAEPATLLT--DTPVNDGAWHNVRIRRQFRNTTLFIDQVEAKWVEVKSKRR 145
Query: 122 TLNIFGPFYLGGVPLNTST----LVRGNLGLNDTFVGCLRNLKSNNKLV 166
+ +F ++GG+P L ++ + F G +R+++ N+ L
Sbjct: 146 DMTVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSLA 194
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 934 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 989
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 990 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1047
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GGV T + + + F GCL ++ N +L
Sbjct: 1048 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRL 1085
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
DY+ L++ G+I FN G+ +A+ + +I DG++H V F+R + L++D V E
Sbjct: 1199 DYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIE 1258
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 323 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 381
Query: 268 QWHTI 272
WH +
Sbjct: 382 AWHDV 386
>sp|O75093|SLIT1_HUMAN Slit homolog 1 protein OS=Homo sapiens GN=SLIT1 PE=2 SV=4
Length = 1534
Score = 72.0 bits (175), Expect = 6e-12, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI A+ + G + S++ GS P + + I DG++HTVE
Sbjct: 1195 STAEDNGILLYNGDNDHI---AVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1251
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN-TSTLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1252 VAFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTGFH 1311
Query: 154 GCLRNLKSNNKLVQD---KHTSSGVIP 177
GC+RNL NN+L QD GV+P
Sbjct: 1312 GCIRNLYINNEL-QDFTKTQMKPGVVP 1337
Score = 40.8 bits (94), Expect = 0.014, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 209 LKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQ 268
+ + V +G+LL + D+ +++ G V+ + D G P SAIY+ DGQ
Sbjct: 1190 ITLQVSTAEDNGILL-YNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAET---INDGQ 1245
Query: 269 WHTIVAIKTKNVISVAVDS---MTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+HT+ + ++++++D MT D G +SE +++GG P
Sbjct: 1246 FHTVELVAFDQMVNLSIDGGSPMTMDNFGKHYTLNSEA----PLYVGGMP 1291
>sp|Q63372|NRX1A_RAT Neurexin-1 OS=Rattus norvegicus GN=Nrxn1 PE=1 SV=3
Length = 1530
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 155/382 (40%), Gaps = 93/382 (24%)
Query: 30 FSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT E +G+I + D KH +D+ A+ + DG ++ + GSG +
Sbjct: 527 ISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIK 585
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLGG+P N
Sbjct: 586 IKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLGGLPEN 644
Query: 138 TSTLV----RGNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGVIP-CSDKT----- 182
+ LV LN +VGC+R+L + + + + +++GV P CS +T
Sbjct: 645 KAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRETAKPCL 704
Query: 183 ---------------------------------ESGVFFYNSGGYVKGVEQFRVGREME- 208
E+ V Y+ ++K + E E
Sbjct: 705 SNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAED 764
Query: 209 LKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATV---------DNGKGPISAIYT 257
+ + + + G+L++ S+ D L++ G VK TV ++ KGP +
Sbjct: 765 VSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAG 824
Query: 258 PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFL 317
Y D +WHT+ ++ + + VD + G H L
Sbjct: 825 ----YNLNDNEWHTVRVVRRGKSLKLTVD---------------DQQAMTGQMAGDHTRL 865
Query: 318 SLSSKKSGPRTKRRSVFLINAN 339
+ ++G T+RR + + +N
Sbjct: 866 EFHNIETGIITERRYLSSVPSN 887
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 124/320 (38%), Gaps = 49/320 (15%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 761 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 814
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLN------- 124
GP L +G L D EWHTV R+ S KL +D Q G+ G L
Sbjct: 815 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETG 873
Query: 125 -IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTE 183
I YL VP N F+G L++L N D + + C
Sbjct: 874 IITERRYLSSVPSN--------------FIGHLQSLTFNGMAYIDLCKNGDIDYCELNAR 919
Query: 184 SG--------VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFIL 234
G V F YV + + M L K ++ GL+L + D+ ++
Sbjct: 920 FGFRNIIADPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVV 978
Query: 235 QMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI-VAIKTKNVISVAVDSMTTDKP 293
+++ G + D G G + + P D QWH + ++ T N+ +V +D+ T +
Sbjct: 979 ELVKGYLHYVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI 1036
Query: 294 GLGPPGSSETDTNNAVFIGG 313
G+ D + ++IGG
Sbjct: 1037 ---TAGARNLDLKSDLYIGG 1053
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 132/325 (40%), Gaps = 58/325 (17%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G++ + K DYV L +K+G + N GSG + + D WH V+
Sbjct: 330 TLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK 387
Query: 95 FSR--QQLSG-------------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+R +Q SG + +DG + G ++ L FY+GG P S
Sbjct: 388 VTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---S 444
Query: 140 TLVRGNLGLNDTFVGCLRNLKSNNKLVQ-----------DKHTSSGVIP--CSDKTESGV 186
T +++ F+GCL+ + N V+ K GV+ C +
Sbjct: 445 TADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDP 504
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK--------------DYF 232
+ + + ++ + + D + +GL+L H K D+F
Sbjct: 505 ITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFF 564
Query: 233 ILQMIDGSVKATVDNGKG--PISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTT 290
++M+DG + +D G G I A+ + DG+W+ + + +++V+++ T
Sbjct: 565 AIEMLDGHLYLLLDMGSGTIKIKALQKKVN-----DGEWYHVDFQRDGRSGTISVNTLRT 619
Query: 291 DKPGLGPPGSSETDTNNAVFIGGHP 315
P P S D ++ +++GG P
Sbjct: 620 --PYTAPGESEILDLDDELYLGGLP 642
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 13 SRIEYPTITGRFKN--------KFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDG 63
S +E+P G++ + + S +KT S + G++ Y D D++ L + + G
Sbjct: 29 SGLEFPGAEGQWTRFPKWNACCESEMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGG 87
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
++ SF+ A D + DG WH+V RQ + L ID E K + +
Sbjct: 88 RLQLSFSIFCAEPATLLADTPVNDGAWHSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDM 147
Query: 124 NIFGPFYLGGVPLNTST----LVRGNLGLNDTFVGCLRNLKSNN-----------KLVQD 168
+F ++GG+P L ++ + F G +R+++ N+ KL ++
Sbjct: 148 TVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQALPVDGSEVKLDEE 207
Query: 169 KHTSSGVIPCS--DKTESGV 186
S G PC D+ + GV
Sbjct: 208 PPNSGGGSPCEAGDEGDGGV 227
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 934 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 989
Query: 70 NCGSGP-MALSSGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 990 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1047
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GGV T + + + F GCL ++ N +L
Sbjct: 1048 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRL 1085
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
DY+ L++ G+I FN G+ +A+ + +I DG++H V F+R + L++D V E
Sbjct: 1199 DYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIE 1258
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 323 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 381
Query: 268 QWHTI 272
WH +
Sbjct: 382 AWHDV 386
>sp|Q9ULB1|NRX1A_HUMAN Neurexin-1 OS=Homo sapiens GN=NRXN1 PE=2 SV=1
Length = 1477
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 155/382 (40%), Gaps = 93/382 (24%)
Query: 30 FSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT E +G+I + D KH +D+ A+ + DG ++ + GSG +
Sbjct: 504 ISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIK 562
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLGG+P N
Sbjct: 563 IKALLKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLGGLPEN 621
Query: 138 TSTLV----RGNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGVIP-CSDKT----- 182
+ LV LN +VGC+R+L + + + + +++GV P CS +T
Sbjct: 622 KAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSKETAKPCL 681
Query: 183 ---------------------------------ESGVFFYNSGGYVKGVEQFRVGREME- 208
E+ V Y+ ++K + E E
Sbjct: 682 SNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAED 741
Query: 209 LKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATV---------DNGKGPISAIYT 257
+ + + + G+L++ S+ D L++ G VK TV ++ KGP +
Sbjct: 742 VSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAG 801
Query: 258 PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFL 317
Y D +WHT+ ++ + + VD + G H L
Sbjct: 802 ----YNLNDNEWHTVRVVRRGKSLKLTVD---------------DQQAMTGQMAGDHTRL 842
Query: 318 SLSSKKSGPRTKRRSVFLINAN 339
+ ++G T+RR + + +N
Sbjct: 843 EFHNIETGIITERRYLSSVPSN 864
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 124/320 (38%), Gaps = 49/320 (15%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 738 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 791
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLN------- 124
GP L +G L D EWHTV R+ S KL +D Q G+ G L
Sbjct: 792 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETG 850
Query: 125 -IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTE 183
I YL VP N F+G L++L N D + + C
Sbjct: 851 IITERRYLSSVPSN--------------FIGHLQSLTFNGMAYIDLCKNGDIDYCELNAR 896
Query: 184 SG--------VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFIL 234
G V F YV + + M L K ++ GL+L + D+ ++
Sbjct: 897 FGFRNIIADPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVV 955
Query: 235 QMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI-VAIKTKNVISVAVDSMTTDKP 293
+++ G + D G G + + P D QWH + ++ T N+ +V +D+ T +
Sbjct: 956 ELVKGYLHYVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI 1013
Query: 294 GLGPPGSSETDTNNAVFIGG 313
G+ D + ++IGG
Sbjct: 1014 ---TAGARNLDLKSDLYIGG 1030
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 51/318 (16%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G++ + K DYV L +K+G + N GSG + + D WH V+
Sbjct: 314 TLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK 371
Query: 95 FSR--QQLSG------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
+R +Q SG + +DG + G ++ L FY+GG P ST
Sbjct: 372 VTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---STADLPGS 428
Query: 147 GLNDTFVGCLRNLKSNNKLVQ-----------DKHTSSGVIP--CSDKTESGVFFYNSGG 193
+++ F+GCL+ + N V+ K GV+ C + + +
Sbjct: 429 PVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPE 488
Query: 194 YVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK--------------DYFILQMIDG 239
+ ++ + + D + +GL+L H K D+F ++M+DG
Sbjct: 489 SFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDG 548
Query: 240 SVKATVDNGKG--PISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGP 297
+ +D G G I A+ + DG+W+ + + +++V+++ T P P
Sbjct: 549 HLYLLLDMGSGTIKIKALLKKVN-----DGEWYHVDFQRDGRSGTISVNTLRT--PYTAP 601
Query: 298 PGSSETDTNNAVFIGGHP 315
S D ++ +++GG P
Sbjct: 602 GESEILDLDDELYLGGLP 619
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 14/167 (8%)
Query: 13 SRIEYPTITGRFKN--------KFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDG 63
S +E+P G++ + + S +KT S + G++ Y D D++ L + + G
Sbjct: 29 SGLEFPGAEGQWTRFPKWNACCESEMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGG 87
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
++ SF+ A D + DG WH+V RQ + L ID E K + +
Sbjct: 88 RLQLSFSIFCAEPATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDM 147
Query: 124 NIFGPFYLGGVPLNTST----LVRGNLGLNDTFVGCLRNLKSNNKLV 166
+F ++GG+P L ++ + F G +R+++ N+ V
Sbjct: 148 TVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQV 194
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 911 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 966
Query: 70 NCGSGP-MALSSGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 967 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1024
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GGV T + + + F GCL ++ N +L
Sbjct: 1025 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRL 1062
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
DY+ L++ G+I FN G+ +A+ + +I DG++H V F+R + L++D V E
Sbjct: 1176 DYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIE 1235
Query: 114 GESKGSSKTLNIF 126
G + L IF
Sbjct: 1236 RYPAG--RQLTIF 1246
Score = 35.4 bits (80), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 307 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 365
Query: 268 QWHTIVAIKT--------KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
WH + + +++++VD + T G + +++ ++GG P
Sbjct: 366 AWHDVKVTRNLRQHSGIGHAMVTISVDGILT-TTGYTQEDYTMLGSDDFFYVGGSP 420
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 24 FKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDK 83
+N F +S+ I+T +Q G + Y + +DY L + +G + Y F+ GSG +S
Sbjct: 3959 LENGFSYSLQIRTV-QQTGTLLYAS--GKVDYNILEIINGAVQYRFDLGSGEGVISVSSI 4015
Query: 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR 143
I DGEWH + R S K+ +D + V+ G + G + LNI G + +
Sbjct: 4016 NISDGEWHQISLERSLNSAKVMVDNKHVSHGSAPGVNGILNIQSNDIFVGAEVRPHPSII 4075
Query: 144 GNLGLNDTFVGCLRNLK 160
G + F+GC+ N+K
Sbjct: 4076 GYEDIQRGFIGCMANIK 4092
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 200 QFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGP----ISAI 255
+F + + ++ +G LL K DY IL++I+G+V+ D G G +S+I
Sbjct: 3956 KFTLENGFSYSLQIRTVQQTGTLLYASGKVDYNILEIINGAVQYRFDLGSGEGVISVSSI 4015
Query: 256 YTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS 287
DG+WH I ++ N V VD+
Sbjct: 4016 N-------ISDGEWHQISLERSLNSAKVMVDN 4040
>sp|O75445|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3
Length = 5202
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 133/314 (42%), Gaps = 36/314 (11%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD---KLILDGEWH 91
+T + I+F + +Y AL +K G++++ F+ P+ +++ + K DG+WH
Sbjct: 1549 RTKVPEGLIVFAASPGNQEEYFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWH 1608
Query: 92 TVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDT 151
+ R Q G++ +DG S + +LGG+P + + L + +
Sbjct: 1609 EIIAIRHQAFGQITLDGIYTGSSAILNGSTVIGDNTGVFLGGLPRSYTILRKDPEIIQKG 1668
Query: 152 FVGCLRNL-----------------KSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGGY 194
FVGCL+++ +S+ + + ++ G C G F +G
Sbjct: 1669 FVGCLKDVHFMKNYNPSAIWEPLDWQSSEEQINVYNSWEG---CPASLNEGAQFLGAGFL 1725
Query: 195 VKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDNGKGPI 252
F G E+ + ++GLLL V++K D+ +++ G + ++
Sbjct: 1726 ELHPYMFHGGMNFEISFKFRTDQLNGLLLFVYNKDGPDFLAMELKSGILTFRLNT----- 1780
Query: 253 SAIYTPSDPYF---FCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAV 309
S +T D +C+G+W+ ++ K + IS +V+ + G N+ V
Sbjct: 1781 SLAFTQVDLLLGLSYCNGKWNKVIIKKEGSFISASVNGLMKHA---SESGDQPLVVNSPV 1837
Query: 310 FIGGHPFLSLSSKK 323
++GG P L+S +
Sbjct: 1838 YVGGIPQELLNSYQ 1851
>sp|Q06561|UNC52_CAEEL Basement membrane proteoglycan OS=Caenorhabditis elegans GN=unc-52
PE=1 SV=2
Length = 3375
Score = 68.6 bits (166), Expect = 8e-11, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHI----DYVALYVKDGQIHYSFNC 71
E+P +T F T +Q+G++ + + DY+++ + +G +H+S+
Sbjct: 3197 EFPHLTSEKDEIVAFKF---KTEQQNGVLLWQGQRPTVQQMEDYISVGIVNGHLHFSYEL 3253
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
G G L S ++ + DG+ H+V F R+ G+++ID +G S G LN+ G ++
Sbjct: 3254 GGGAAHLISEER-VDDGKEHSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDGNIFV 3312
Query: 132 GGVPLNTSTLVRGNLGL-NDTFVGCLRNLKSNN---KLVQDKHTSSGVIPCSD 180
GGVP + + GL ++ FVGC+ +++ N L+ V PC +
Sbjct: 3313 GGVP----DISKATGGLFSNNFVGCIADVELNGVKLDLMATAIDGKNVKPCDE 3361
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 68.2 bits (165), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
D+++L ++DG + + + GSG L S D I DGEWH V R+ G +++DG+ +
Sbjct: 4258 DFISLGLQDGHLVFRYQLGSGEARLVSEDP-INDGEWHRVTALREGRRGSIQVDGEELVS 4316
Query: 114 GESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNL 159
G S G + +N G Y+GG P + +TL G + GC++NL
Sbjct: 4317 GRSPGPNVAVNAKGSVYIGGAP-DVATLTGGR--FSSGITGCVKNL 4359
Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
D+V+L + G + + + GSG L S + L L G WH V R G L+++G
Sbjct: 3978 DFVSLAMVGGHLEFRYELGSGLAVLRSAEPLAL-GRWHRVSAERLNKDGSLRVNGGRPVL 4036
Query: 114 GESKGSSKTLNIFGPFYLGG----VPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDK 169
S G S+ LN+ YLGG VPL+ +T ++ F GC+ + N K +
Sbjct: 4037 RSSPGKSQGLNLHTLLYLGGVEPSVPLSPAT------NMSAHFRGCVGEVSVNGKRLDLT 4090
Query: 170 HT---SSGVIPCSDKT 182
++ S G+ C D +
Sbjct: 4091 YSFLGSQGIGQCYDSS 4106
Score = 52.0 bits (123), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK-----------HIDYVALYVK 61
S + PTI ++ KF+ I + S DG++ Y + D+++ +
Sbjct: 3672 SFLPLPTIKDAYR-KFEIKITFRPDS-ADGMLLYNGQKRVPGSPTNLANRQPDFISFGLV 3729
Query: 62 DGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSK 121
G+ + F+ GSG + L L G +HTV R G L + G S+G +
Sbjct: 3730 GGRPEFRFDAGSGMATIRHPTPLAL-GHFHTVTLLRSLTQGSLIVGDLAPVNGTSQGKFQ 3788
Query: 122 TLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLK 160
L++ YLGG P + + + GL+ F+GC+R L+
Sbjct: 3789 GLDLNEELYLGGYP-DYGAIPKA--GLSSGFIGCVRELR 3824
Score = 37.4 bits (85), Expect = 0.16, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 183 ESGVFFYNSG-----GYVKGVEQFRVGREMELKMDVKPRNISGLLL-------SVHSKKD 230
+ G +F++ G G+V V +EL +V+ SGLLL KD
Sbjct: 4201 QYGAYFHDDGFLAFPGHVFSRSLPEVPETIEL--EVRTSTASGLLLWQGVEVGEAGQGKD 4258
Query: 231 YFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTT 290
+ L + DG + G G A DP DG+WH + A++ S+ VD
Sbjct: 4259 FISLGLQDGHLVFRYQLGSG--EARLVSEDP--INDGEWHRVTALREGRRGSIQVDGEEL 4314
Query: 291 DKPGLGPPGSSETDTNNAVFIGGHP 315
G P + + +V+IGG P
Sbjct: 4315 -VSGRSPGPNVAVNAKGSVYIGGAP 4338
>sp|O94813|SLIT2_HUMAN Slit homolog 2 protein OS=Homo sapiens GN=SLIT2 PE=1 SV=1
Length = 1529
Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ R + I T E GI+ Y D HI A+ + G++ S+
Sbjct: 1166 NKESYLQIPSAKVRPQTNITLQI---ATDEDSGILLYKGDKDHI---AVELYRGRVRASY 1219
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE S L +DG + TLN P
Sbjct: 1220 DTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGNPKIITNLSKQSTLNFDSPL 1279
Query: 130 YLGGVP--LNTSTLVRGNLGLNDT-FVGCLRNLKSNNKL--VQDKHTSSGVIP 177
Y+GG+P N ++L R G N T F GC+RNL N++L Q +G++P
Sbjct: 1280 YVGGMPGKSNVASL-RQAPGQNGTSFHGCIRNLYINSELQDFQKVPMQTGILP 1331
Score = 42.0 bits (97), Expect = 0.006, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATV 245
V F N Y++ + +V + + + + SG+LL KD+ +++ G V+A+
Sbjct: 1162 VNFINKESYLQ-IPSAKVRPQTNITLQIATDEDSGILL-YKGDKDHIAVELYRGRVRASY 1219
Query: 246 DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDT 305
D G P SAIY+ DG +H + + +S++VD P + S ++
Sbjct: 1220 DTGSHPASAIYSVET---INDGNFHIVELLALDQSLSLSVDG---GNPKIITNLSKQSTL 1273
Query: 306 N--NAVFIGGHPFLS-LSSKKSGP 326
N + +++GG P S ++S + P
Sbjct: 1274 NFDSPLYVGGMPGKSNVASLRQAP 1297
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/301 (22%), Positives = 128/301 (42%), Gaps = 32/301 (10%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK-HIDYVALYVKDGQIHYSFNC 71
S +++ I+ +N+ S+ ++ + G++ A + + L++ G H+
Sbjct: 3346 SYLQFVGISPSHRNRLHLSMLVRPHAASQGLLLSTAPMSGRSPSLVLFLNHG--HFVAQT 3403
Query: 72 -GSGPMALSSGDKLILDGEWH--TVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGP 128
G GP + G+WH +V + QQ+ Q+V +G S K L+ P
Sbjct: 3404 EGPGPRLQVQSRQHSRAGQWHRVSVRWGMQQI--------QLVVDGSQTWSQKALHHRVP 3455
Query: 129 ---------FYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC- 178
+GG+P ++ + L ++ F GCL+ L+ + + ++ GV PC
Sbjct: 3456 RAERPQPYTLSVGGLPASSYS---SKLPVSVGFSGCLKKLQLDKRPLRTPTQMVGVTPCV 3512
Query: 179 SDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQM 236
S E G+FF S G V + L+++++P +GL+ + Y L++
Sbjct: 3513 SGPLEDGLFFPGSEGVVTLELPKAKMPYVSLELEMRPLAAAGLIFHLGQALATPYMQLKV 3572
Query: 237 IDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLG 296
+ V ++G G S T CDG+WH + I ++ + + VD+ + G
Sbjct: 3573 LTEQVLLQANDGAGEFSTWVTYPK---LCDGRWHRVAVIMGRDTLRLEVDTQSNHTTGRL 3629
Query: 297 P 297
P
Sbjct: 3630 P 3630
Score = 33.5 bits (75), Expect = 2.6, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 14/125 (11%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLS 101
G+IF++ Y+ L V Q+ N G+G + + DG WH V + +
Sbjct: 3554 GLIFHLGQALATPYMQLKVLTEQVLLQANDGAGEFSTWVTYPKLCDGRWHRVAVIMGRDT 3613
Query: 102 GKLKIDGQVVAEG----ESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR 157
+L++D Q ES S L +LG +P S+ R L + GCLR
Sbjct: 3614 LRLEVDTQSNHTTGRLPESLAGSPAL-----LHLGSLP--KSSTARPEL---PAYRGCLR 3663
Query: 158 NLKSN 162
L N
Sbjct: 3664 KLLIN 3668
>sp|Q9Y4C0|NRX3A_HUMAN Neurexin-3 OS=Homo sapiens GN=NRXN3 PE=1 SV=4
Length = 1643
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 131/348 (37%), Gaps = 67/348 (19%)
Query: 27 KFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLIL 86
+ D S KT G++ Y+ D D++ L + DG++ F+ A+ S +K +
Sbjct: 48 RSDLSFQFKTNVST-GLLLYLDDGGVCDFLCLSLVDGRVQLRFSMDCAETAVLS-NKQVN 105
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRG 144
D WH + SR +L L +DG+ + GE + +++ +LGGVP + S L
Sbjct: 106 DSSWHFLMVSRDRLRTVLMLDGEGQS-GELQPQRPYMDVVSDLFLGGVPTDIRPSALTLD 164
Query: 145 NLGLNDTFVGCLRNLKSNNK---------LVQDKHTSSGVIPCSDKTESGVFFYNSG--- 192
+ F G + +LK N + D G PC + G+ F G
Sbjct: 165 GVQAMPGFKGLILDLKYGNSEPRLLGSRGVQMDAEGPCGERPCEN---GGICFLLDGHPT 221
Query: 193 ------GY-------------------------VKGVEQFRVGREM-------------- 207
GY + V FR +
Sbjct: 222 CDCSTTGYGGKLCSEDVSQDPGLSHLMMSEQAREENVATFRGSEYLCYDLSQNPIQSSSD 281
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + DG+V ++ G G AI P + F D
Sbjct: 282 EITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DN 340
Query: 268 QWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
WH + + ++++VD + T G + +++ ++GG P
Sbjct: 341 AWHDVKVTRNLRQVTISVDGILT-TTGYTQEDYTMLGSDDFFYVGGSP 387
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 152/382 (39%), Gaps = 100/382 (26%)
Query: 30 FSIDIKTTSEQDGIIFYV-------ADVK-----HIDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT E +G+I + D + +D+ A+ + DG ++ + GSG +
Sbjct: 471 ISFDFRTT-EPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIK 529
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLGG+P N
Sbjct: 530 VKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GESEILDLEGDMYLGGLPEN 588
Query: 138 TSTLV----RGNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGV------------- 175
+ L+ LN +VGC+R+L N + + + ++GV
Sbjct: 589 RAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCD 648
Query: 176 -IPCSD-------------------------KTESGVFFYNSGGYVKGVEQFRVGREMEL 209
PC + + E+ + Y+ Y+K + + E E
Sbjct: 649 SYPCKNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKIIMPMVMHTEAE- 707
Query: 210 KMDVKPRNIS----GLLLSVHSK--KDYFILQMIDGSVKATV---------DNGKGPISA 254
DV R +S GLL++ S+ D L++ G VK V ++ KGP
Sbjct: 708 --DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGP-ET 764
Query: 255 IYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGH 314
+Y D +WHT+ ++ + + VD D +G H
Sbjct: 765 LYAGQK---LNDNEWHTVRVVRRGKSLKLTVDD----------------DVAEGTMVGDH 805
Query: 315 PFLSLSSKKSGPRTKRRSVFLI 336
L + ++G T++R + ++
Sbjct: 806 TRLEFHNIETGIMTEKRYISVV 827
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTV 93
KTTS I+F D D++A+ + G IHY F+ G+GP + + D+ + D +WH V
Sbjct: 900 KTTSPDGFILFNSGDGN--DFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNV 957
Query: 94 EFSRQQL-SGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
+R + LK+D +VV + +K L++ G Y+ G+ + + + D F
Sbjct: 958 VITRDNSNTHSLKVDTKVVT--QVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGF 1015
Query: 153 VGCLRNLKSNNK---LVQDKHTSSGVI 176
GCL ++ N + L+ D SG I
Sbjct: 1016 QGCLASVDLNGRLPDLINDALHRSGQI 1042
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 41/309 (13%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G+I + K DYV L +KDG + N GSG + + D WH V+
Sbjct: 289 TWQRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVK 346
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVG 154
+R + +DG + G ++ L FY+GG P ST +++ F+G
Sbjct: 347 VTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---STADLPGSPVSNNFMG 403
Query: 155 CLRNL--KSNN---------KLVQDKHTSSG--VIPCSD-KTESGVFFYNSGGYVKGVEQ 200
CL+ + K+N+ ++ K G V C + T + F Y+ + +
Sbjct: 404 CLKEVVYKNNDIRLELSRLARIADTKMKIYGEVVFKCENVATLDPINFETPEAYIS-LPK 462
Query: 201 FRVGREMELKMDVKPRNISGLLLSVH--------------SKKDYFILQMIDGSVKATVD 246
+ R + D + +GL+L H +K D+F ++++DG++ +D
Sbjct: 463 WNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLD 522
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTN 306
G G I T DG+W+ + + +++V+S T P S D
Sbjct: 523 MGSGTIKVKATQKKAN---DGEWYHVDIQRDGRSGTISVNSRRT--PFTASGESEILDLE 577
Query: 307 NAVFIGGHP 315
+++GG P
Sbjct: 578 GDMYLGGLP 586
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 112/286 (39%), Gaps = 31/286 (10%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 705 EAEDVSFRFMSQRAYGLLVATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNS 758
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D VAEG G L
Sbjct: 759 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLTVDDD-VAEGTMVGDHTRLEFH----- 811
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 812 -NIETGIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIA 870
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISG-LLLSVHSKKDYFILQMIDGSVK 242
V F Y+ + + M L K + G +L + D+ ++++ G +
Sbjct: 871 DPVTFKTKSSYLS-LATLQAYTSMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKGYIH 929
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDS 287
D G GP + I SD D QWH +V + N S+ VD+
Sbjct: 930 YVFDLGNGP-NVIKGNSD-RPLNDNQWHNVVITRDNSNTHSLKVDT 973
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 36 TTSEQDGIIFYVADVKHI-DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVE 94
+T+ +DGI+ + + D++ L+++ G+I FN G+ +++ + DG++H V
Sbjct: 1123 STTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVR 1182
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSSKTLNIF 126
F+R + L++D V E G + L IF
Sbjct: 1183 FTRNGGNATLQVDNWPVNEHYPTG--RQLTIF 1212
>sp|Q6P9K9|NRX3A_MOUSE Neurexin-3 OS=Mus musculus GN=Nrxn3 PE=1 SV=2
Length = 1571
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 153/382 (40%), Gaps = 100/382 (26%)
Query: 30 FSIDIKTTSEQDGIIFYV-------ADVK-----HIDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT E +G+I + DV+ +D+ A+ + DG ++ + GSG +
Sbjct: 471 ISFDFRTT-EPNGLILFTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMGSGTIK 529
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLGG+P N
Sbjct: 530 VKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GESEILDLEGDMYLGGLPEN 588
Query: 138 TSTLV----RGNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGV------------- 175
+ L+ LN +VGC+R+L N + + + ++GV
Sbjct: 589 RAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCD 648
Query: 176 -IPCSD-------------------------KTESGVFFYNSGGYVKGVEQFRVGREMEL 209
PC + + E+ + Y+ Y+K + + E E
Sbjct: 649 SYPCKNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKVIMPMVMHTEAE- 707
Query: 210 KMDVKPRNIS----GLLLSVHSK--KDYFILQMIDGSVKATV---------DNGKGPISA 254
DV R +S GLL++ S+ D L++ G VK V ++ KGP
Sbjct: 708 --DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGP-ET 764
Query: 255 IYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGH 314
+Y D +WHT+ ++ + + VD D +G H
Sbjct: 765 LYAGQK---LNDNEWHTVRVVRRGKSLKLTVDD----------------DVAEGTMVGDH 805
Query: 315 PFLSLSSKKSGPRTKRRSVFLI 336
L + ++G T++R + ++
Sbjct: 806 TRLEFHNIETGIMTEKRYISVV 827
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 128/344 (37%), Gaps = 65/344 (18%)
Query: 28 FDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILD 87
F F ++ T G++ Y+ D D++ L + DG++ F+ + S +K + D
Sbjct: 53 FQFKTNVST-----GLLLYLDDGGVCDFLCLSLVDGRVQLRFSMDCAETTVLS-NKQVND 106
Query: 88 GEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGN 145
WH + SR ++ L IDG+ + GE + +++ +LGGVP + S L
Sbjct: 107 SSWHFLMVSRDRVRTGLVIDGEGQS-GELRPQRPYMDVVSDLFLGGVPADIRPSALTLDG 165
Query: 146 LGLNDTFVGCLRNLKSNNK-----------------------------LVQDKH------ 170
+ F G + +LK N + D H
Sbjct: 166 VQSMPGFKGLMLDLKYGNSEPRLLGSQSVQLEAEGPCGERPCENGGICFLLDGHPTCDCS 225
Query: 171 -TSSGVIPCSDKTESGV----FFYNSGGYVKGVEQFRVGREM--------------ELKM 211
T G CS+ G + + V FR + E+ +
Sbjct: 226 TTGYGGTLCSEDVSQGPGLSHLMMSEQAREENVATFRGSEYLCYDLSQNPIQSSSDEITL 285
Query: 212 DVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHT 271
K +GL+L DY L + DG+V ++ G G AI P + F D WH
Sbjct: 286 SFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DNAWHD 344
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+ + ++++VD + T G + +++ ++GG P
Sbjct: 345 VKVTRNLRQVTISVDGILT-TTGYTQEDYTMLGSDDFFYVGGSP 387
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTV 93
KTTS I+F D D++A+ + G IHY F+ G+GP + + D+ + D +WH V
Sbjct: 900 KTTSADGFILFNSGDGN--DFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNV 957
Query: 94 EFSRQQL-SGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
+R + LK+D +VV + +K L++ G Y+ G+ + + + D F
Sbjct: 958 VITRDSSNTHSLKVDTKVVT--QVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGF 1015
Query: 153 VGCLRNLKSNNK---LVQDKHTSSGVI 176
GCL ++ N + L+ D SG I
Sbjct: 1016 QGCLASVDLNGRLPDLINDALHRSGQI 1042
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 41/309 (13%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G+I + K DYV L +KDG + N GSG + + D WH V+
Sbjct: 289 TWQRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVK 346
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVG 154
+R + +DG + G ++ L FY+GG P ST +++ F+G
Sbjct: 347 VTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---STADLPGSPVSNNFMG 403
Query: 155 CLRNL--KSNN-KLVQDKHTSSG----------VIPCSD-KTESGVFFYNSGGYVKGVEQ 200
CL+ + K+N+ +L + G V C + T + F Y+ + +
Sbjct: 404 CLKEVVYKNNDIRLELSRLARIGDTKMKIYGEVVFKCENVATLDPINFETPEAYIS-LPK 462
Query: 201 FRVGREMELKMDVKPRNISGLLLSVH--------------SKKDYFILQMIDGSVKATVD 246
+ R + D + +GL+L H +K D+F ++++DG++ +D
Sbjct: 463 WNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLD 522
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTN 306
G G I T DG+W+ + + +++V+S T P S D
Sbjct: 523 MGSGTIKVKATQKKAN---DGEWYHVDIQRDGRSGTISVNSRRT--PFTASGESEILDLE 577
Query: 307 NAVFIGGHP 315
+++GG P
Sbjct: 578 GDMYLGGLP 586
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 113/286 (39%), Gaps = 31/286 (10%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 705 EAEDVSFRFMSQRAYGLLVATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNS 758
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D VAEG G L
Sbjct: 759 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLTVDDD-VAEGTMVGDHTRLEFH----- 811
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 812 -NIETGIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIA 870
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISG-LLLSVHSKKDYFILQMIDGSVK 242
V F Y+ + + M L K + G +L + D+ ++++ G +
Sbjct: 871 DPVTFKTKSSYLT-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGNDFIAVELVKGYIH 929
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDS 287
D G GP + I SD D QWH +V + + N S+ VD+
Sbjct: 930 YVFDLGNGP-NVIKGNSDRPLN-DNQWHNVVITRDSSNTHSLKVDT 973
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 36 TTSEQDGIIFYVADVKHI-DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVE 94
+T+ +DGI+ + + D++ L+++ G+I FN G+ +++ + DG++H V
Sbjct: 1123 STTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVR 1182
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSS 120
F+R + L++D V E G++
Sbjct: 1183 FTRNGGNATLQVDNWPVNEHYPTGNT 1208
>sp|Q9R1B9|SLIT2_MOUSE Slit homolog 2 protein OS=Mus musculus GN=Slit2 PE=2 SV=2
Length = 1521
Score = 64.7 bits (156), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ R + I T E GI+ Y D HI A+ + G++ S+
Sbjct: 1158 NKESYLQIPSAKVRPQTNITLQI---ATDEDSGILLYKGDKDHI---AVELYRGRVRASY 1211
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE S L +DG + TLN P
Sbjct: 1212 DTGSHPASAIYSVETINDGNFHIVELLTLDSSLSLSVDGGSPKVITNLSKQSTLNFDSPL 1271
Query: 130 YLGGVP-LNTSTLVRGNLGLNDT-FVGCLRNLKSNNKL--VQDKHTSSGVIP 177
Y+GG+P N +R G N T F GC+RNL N++L + +G++P
Sbjct: 1272 YVGGMPGKNNVASLRQAPGQNGTSFHGCIRNLYINSELQDFRKMPMQTGILP 1323
Score = 36.6 bits (83), Expect = 0.27, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATV 245
V F N Y++ + +V + + + + SG+LL KD+ +++ G V+A+
Sbjct: 1154 VNFVNKESYLQ-IPSAKVRPQTNITLQIATDEDSGILL-YKGDKDHIAVELYRGRVRASY 1211
Query: 246 DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDT 305
D G P SAIY+ DG +H + + + +S++VD + K S +
Sbjct: 1212 DTGSHPASAIYSVET---INDGNFHIVELLTLDSSLSLSVDG-GSPKVITNLSKQSTLNF 1267
Query: 306 NNAVFIGGHP 315
++ +++GG P
Sbjct: 1268 DSPLYVGGMP 1277
>sp|A1XQY1|NR3BA_DANRE Neurexin-3b OS=Danio rerio GN=nrxn3b PE=2 SV=1
Length = 1686
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 147/370 (39%), Gaps = 95/370 (25%)
Query: 28 FDFSIDIKTTSEQDGIIFYVA----DVK--------HIDYVALYVKDGQIHYSFNCGSGP 75
FDF TSE +G+I + D K +D+ A+ + DG ++ + GSG
Sbjct: 484 FDFR-----TSEPNGLILFTQGKPQDKKDSRSQRSNKVDFFAVELLDGHLYLLLDMGSGT 538
Query: 76 MALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP 135
+ + + + DG WH V+ R SG + ++ + S G ++ L++ G YLGG+P
Sbjct: 539 IKVKATQNKVNDGVWHHVDIQRDGRSGIISVNSRRTPFTAS-GENEILDLEGNLYLGGLP 597
Query: 136 LNTSTLV----RGNLGLNDTFVGCLRNL---------------------KSNNKLVQDKH 170
N + L+ LN +VGC+R+L KS+ V K
Sbjct: 598 DNRADLILPTELWTAMLNYGYVGCIRDLFIDGRSKDIRQIAEAQNVGGIKSSCSKVTAKQ 657
Query: 171 TSSG---------------VIPCS-----DKT---ESGVFFYNSGGYVKGVEQFRVGREM 207
S + C+ D+T E+ + Y+ Y+K V + E
Sbjct: 658 CDSNSCKNNGICKEGWNRFICDCTGTGYWDRTCEREASILSYDGSMYMKVVMPTIIHTEA 717
Query: 208 ELKMDVKPRNIS----GLLLSVHSKK--DYFILQMIDGSVKATVDNGKGPISAIYTPSDP 261
E DV R +S GLL++ S++ D L++ G VK V+ GKGP +Y
Sbjct: 718 E---DVSLRFMSQRAFGLLMAATSRESADTLRLELDSGRVKLIVNLGKGP-ETLYAGQK- 772
Query: 262 YFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSS 321
D WH++ + I + VD D G H L S+
Sbjct: 773 --VNDNDWHSVRVTRRGKNIKLMVDD----------------DVAEGQMNGDHTRLEFSN 814
Query: 322 KKSGPRTKRR 331
++G T+RR
Sbjct: 815 VETGILTERR 824
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 103/256 (40%), Gaps = 21/256 (8%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLS 101
G++ + D + L + G++ N G GP L +G K + D +WH+V +R+ +
Sbjct: 731 GLLMAATSRESADTLRLELDSGRVKLIVNLGKGPETLYAGQK-VNDNDWHSVRVTRRGKN 789
Query: 102 GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKS 161
KL +D VAEG+ G L V T R F+G L+ LK
Sbjct: 790 IKLMVDDD-VAEGQMNGDHTRLE------FSNVETGILTERRFASTAPSNFIGHLQGLKF 842
Query: 162 NNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRVGREMELKMDV 213
N L D + + C G V F G Y+ G+ + M L
Sbjct: 843 NGLLYIDMCKNGDIEFCELNARFGMRSIVADPVTFKTKGSYL-GLATLQAYSTMHLFFQF 901
Query: 214 KPRNISG-LLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI 272
K + G +L + D+ ++++ G + + G GP S + SD D QWH +
Sbjct: 902 KTTSGDGFILFNSGDGNDFIAVELVKGYIHYVFNLGNGP-SLLKGNSDSPLN-DNQWHNV 959
Query: 273 VAIK-TKNVISVAVDS 287
V + N ++ VD+
Sbjct: 960 VITRDASNTHTLKVDA 975
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 27 KFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLIL 86
+ D S KT + D ++ Y D + D++ L ++D ++ F+ ++S DK++
Sbjct: 44 RSDLSFQFKT-AISDALVLYFDDGGYCDFLLLSIEDAKLKLRFSVDCAETTITS-DKMVN 101
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRG 144
D WH SR L L +DG + E + + + I YLGGVP + TS L
Sbjct: 102 DSHWHFATISRHNLRTVLALDGDSKVD-EVRPQRQFMKIVSDLYLGGVPQDIRTSALTLP 160
Query: 145 NLGLNDTFVGCLRNLKSNNKL 165
F G + +L NK+
Sbjct: 161 AAKEMPPFKGIITDLGYGNKV 181
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTV 93
KTTS I+F D D++A+ + G IHY FN G+GP L + D + D +WH V
Sbjct: 902 KTTSGDGFILFNSGDGN--DFIAVELVKGYIHYVFNLGNGPSLLKGNSDSPLNDNQWHNV 959
Query: 94 EFSRQQL-SGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
+R + LK+D + V+ + +K L++ G ++ G+ N + + + F
Sbjct: 960 VITRDASNTHTLKVDAKSVS--QVVNGAKNLDLKGDLFVAGLGPNMYQNLPKLVVPREGF 1017
Query: 153 VGCLRNLKSNNK---LVQDKHTSSGVI 176
GCL ++ N + L+ D SG I
Sbjct: 1018 QGCLASMDLNGRLPDLINDALFRSGQI 1044
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 127/323 (39%), Gaps = 54/323 (16%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G+I + K DYV L +KDG + N GSG + + D WH ++
Sbjct: 285 TWQRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDIK 342
Query: 95 FSR--QQLSG-------------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+R +Q SG + +DG + G ++ L FY+GG P S
Sbjct: 343 VTRNLRQHSGIGHAMVNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---S 399
Query: 140 TLVRGNLGLNDTFVGCLRNL--KSNN---------KLVQDKHTSSG--VIPCSDKTESGV 186
T +++ F+GCL+ + K+N+ ++ K G V C +
Sbjct: 400 TADLPGSPVSNNFMGCLKEVVYKNNDIRLELSRLARIADPKMKLQGDIVFKCENVPTLDP 459
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK--------------DYF 232
+ + G+ ++ R + D + +GL+L K D+F
Sbjct: 460 ISFETAESFLGLPKWNTKRVGSISFDFRTSEPNGLILFTQGKPQDKKDSRSQRSNKVDFF 519
Query: 233 ILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDK 292
++++DG + +D G G I T + DG WH + + ++V+S T
Sbjct: 520 AVELLDGHLYLLLDMGSGTIKVKATQNK---VNDGVWHHVDIQRDGRSGIISVNSRRT-- 574
Query: 293 PGLGPPGSSETDTNNAVFIGGHP 315
P + D +++GG P
Sbjct: 575 PFTASGENEILDLEGNLYLGGLP 597
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 36 TTSEQDGIIFYVADVKHI-DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVE 94
+T+ +DGI+ + + DY+ L++++G++ +FN G+ +++ + DG++H V
Sbjct: 1125 STTIKDGILVRIDSAPRLGDYIMLHIEEGKVCVTFNIGTVDISVKEMTTEVNDGKYHVVR 1184
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSS 120
F+R + L++D + E G+S
Sbjct: 1185 FTRNGGNATLQVDNWPINEHFPSGNS 1210
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + DG+V ++ G G AI P + F D
Sbjct: 278 EITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DN 336
Query: 268 QWHTI 272
WH I
Sbjct: 337 AWHDI 341
>sp|P24014|SLIT_DROME Protein slit OS=Drosophila melanogaster GN=sli PE=1 SV=2
Length = 1504
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+++EQ+GI+ Y H+ A+ + +G+I S++ G+ P++ +++ DG++H VE
Sbjct: 1205 SSAEQNGILMYDGQDAHL---AVELFNGRIRVSYDVGNHPVSTMYSFEMVADGKYHAVEL 1261
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLND--TFV 153
+ + L++D + ++GS+ L + P +LGG+P++ + N + + +F
Sbjct: 1262 LAIKKNFTLRVDRGLARSIINEGSNDYLKLTTPMFLGGLPVDPAQQAYKNWQIRNLTSFK 1321
Query: 154 GCLRNLKSNNKLV 166
GC++ + N+KLV
Sbjct: 1322 GCMKEVWINHKLV 1334
>sp|D0PRN3|NRX3A_CHICK Neurexin-3 OS=Gallus gallus PE=1 SV=1
Length = 1693
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 151/382 (39%), Gaps = 100/382 (26%)
Query: 30 FSIDIKTTSEQDGIIFYV-------ADVK-----HIDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT E +G+I + D + +D+ A+ + DG ++ + GSG +
Sbjct: 490 ISFDFRTT-EPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIK 548
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLGG+P N
Sbjct: 549 VKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GESEILDLEGDMYLGGLPEN 607
Query: 138 TSTLV----RGNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGV------------- 175
+ L+ LN +VGC+R+L N + + + ++GV
Sbjct: 608 RAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEAQNAAGVKSSCSRLSTKQCD 667
Query: 176 -IPCSD-------------------------KTESGVFFYNSGGYVKGVEQFRVGREMEL 209
PC + + E+ + Y+ Y+K + + E E
Sbjct: 668 SYPCKNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKIIMPMVMHTEAE- 726
Query: 210 KMDVKPRNIS----GLLLSVHSK--KDYFILQMIDGSVKATV---------DNGKGPISA 254
DV R +S GLL++ S+ D L++ G VK V + KGP
Sbjct: 727 --DVSFRFMSQRAYGLLMATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNASKGP-ET 783
Query: 255 IYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGH 314
+Y D +WHT+ ++ + + VD D +G H
Sbjct: 784 LYAGQK---LNDNEWHTVRVVRRGKSLKLMVDD----------------DVAEGTMVGDH 824
Query: 315 PFLSLSSKKSGPRTKRRSVFLI 336
L + ++G T++R + +I
Sbjct: 825 TRLEFHNIETGIMTEKRYISVI 846
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTV 93
KTTS I+F D D++A+ + G IHY F+ G+GP + + D+ + D +WH V
Sbjct: 919 KTTSADGFILFNSGDGN--DFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNV 976
Query: 94 EFSRQQL-SGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
+R + LK+D ++V + +K L++ G Y+ G+ + + + D F
Sbjct: 977 VITRDNSNTHSLKVDTKMVT--QVINGAKNLDLKGDLYIAGLAQGMYSNLPKLVASRDGF 1034
Query: 153 VGCLRNLKSNNK---LVQDKHTSSGVI 176
GCL ++ N + L+ D SG I
Sbjct: 1035 QGCLASVDLNGRLPDLINDALHRSGQI 1061
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 112/286 (39%), Gaps = 31/286 (10%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 724 EAEDVSFRFMSQRAYGLLMATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNA 777
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D VAEG G L
Sbjct: 778 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLMVDDD-VAEGTMVGDHTRLEFH----- 830
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 831 -NIETGIMTEKRYISVIPSSFIGHLQSLMFNGMLYIDLCKNGDIDYCELKARFGLRNIIA 889
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISG-LLLSVHSKKDYFILQMIDGSVK 242
V F Y+ + + M L K + G +L + D+ ++++ G +
Sbjct: 890 DPVTFKTKSSYLS-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGNDFIAVELVKGYIH 948
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDS 287
D G GP + I SD D QWH +V + N S+ VD+
Sbjct: 949 YVFDLGNGP-NVIKGNSD-RPLNDNQWHNVVITRDNSNTHSLKVDT 992
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLS 101
G++ Y D D++ L + DG+I F+ + + DK + D WH + SR L
Sbjct: 62 GLLLYFDDGGVCDFLCLSLVDGRIQLQFSVDCAETTVIT-DKQVNDSNWHFLMVSRNHLR 120
Query: 102 GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNLGLNDTFVGCLRNL 159
L +DG+ GE + + +NI ++GGVP + + L + F G + NL
Sbjct: 121 TVLVLDGE-AKPGEVRPQRQYMNIVSDLFVGGVPSYIRPAALTLDGVLSEPPFQGFILNL 179
Query: 160 KSNNKLVQ 167
K N Q
Sbjct: 180 KYGNSEPQ 187
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 56/324 (17%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G+I + K DYV L +KDG + N GSG + + D WH V+
Sbjct: 293 TWQRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVK 350
Query: 95 FSR--QQLSG-------------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+R +Q SG + +DG + G ++ L FY+GG P S
Sbjct: 351 VTRNLRQHSGIGHAMVNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---S 407
Query: 140 TLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVI-------------PCSD-KTESG 185
T +++ F+GCL+ + N ++ + + I C + T
Sbjct: 408 TADLPGSPVSNNFMGCLKEVVYKNNDIRLELSRLARIGDTKMKIYGEVKFVCENVATLDP 467
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVH--------------SKKDY 231
+ F Y+ + ++ R + D + +GL+L H +K D+
Sbjct: 468 ISFETPEAYIS-LPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDF 526
Query: 232 FILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD 291
F ++++DG++ +D G G I T DG+W+ + + +++V+S T
Sbjct: 527 FAVELLDGNLYLLLDMGSGTIKVKATQKKAN---DGEWYHVDIQRDGRSGTISVNSRRT- 582
Query: 292 KPGLGPPGSSETDTNNAVFIGGHP 315
P S D +++GG P
Sbjct: 583 -PFTASGESEILDLEGDMYLGGLP 605
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 36 TTSEQDGIIFYVADVKHI-DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVE 94
+T+ +DGI+ + + D++ L+++ G+I FN G+ +++ + DG++H V
Sbjct: 1142 STTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEESTPVNDGKYHVVR 1201
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSSKT 122
F+R + L++D V E G++ +
Sbjct: 1202 FTRNGGNATLQVDSWPVNEHYPTGNTDS 1229
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + DG+V ++ G G AI P + F D
Sbjct: 286 EITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DN 344
Query: 268 QWHTI 272
WH +
Sbjct: 345 AWHDV 349
>sp|A1XQX2|NR1BA_DANRE Neurexin-1b OS=Danio rerio GN=nrxn1b PE=2 SV=1
Length = 1470
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 151/366 (41%), Gaps = 68/366 (18%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S + +P +++ FS+ T+ +G++ Y D D++ L+V G++ F
Sbjct: 31 SDEQWVAFPMWNACCESEMSFSV---KTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCF 87
Query: 70 N--CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ C LS D I D WH+V R + L +D +V E E K + + +F
Sbjct: 88 SIFCAESTCVLS--DVAINDNRWHSVSIMRNFRNTTLIVDDEVKWE-EVKSKRRDMTVFS 144
Query: 128 PFYLGGVP--LNTSTLVRGNLGLND--TFVGCLRNLKSNNK-------------LVQDKH 170
+LGG+P L + +L + + D +F G + ++K N+ L ++
Sbjct: 145 HLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSEN 204
Query: 171 T--SSGVI------PCSDKTESG------------VFFYNSG--GYV---KGVEQFRVGR 205
T + GV P D +++G + + G YV +G E F
Sbjct: 205 TCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDL 264
Query: 206 EM--------ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYT 257
+ E+ + + +GL+L DY L + +G+V ++ G G A+
Sbjct: 265 SLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVE 324
Query: 258 PSDPYFFCDGQWHTIVAIKTKN--------VISVAVDSMTTDKPGLGPPGSSETDTNNAV 309
P + F D +WH + ++ +++++VD + T G + +++ +
Sbjct: 325 PVNGKFN-DNEWHDVKVLRNLRQHSGVGYAMVTISVDGILT-TTGYTQEEYTMLGSDDFL 382
Query: 310 FIGGHP 315
++GG P
Sbjct: 383 YVGGSP 388
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 38/296 (12%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYS-------FNCGS--GPMALSSGDKLILDGEWHT 92
G++ D + L ++ G++ + NC + GP +L +G L D EWHT
Sbjct: 722 GVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLN-DDEWHT 780
Query: 93 VEFSRQQLSGKLKIDGQVVAEGESKGSSKTL---NIFGPFYLGGVPLNTSTLVRGNLGLN 149
V R+ S KL +D +GE G L NI G L T +
Sbjct: 781 VRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPT---------MP 831
Query: 150 DTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQF 201
F+G L++L N K D + + C G V F + YV +
Sbjct: 832 SNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVT-LPSL 890
Query: 202 RVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSD 260
+ M L K + GL+L + D+ ++++ G + D G G
Sbjct: 891 QAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIK 950
Query: 261 PYFFCDGQWHTI-VAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
P D WH + ++ N+ +V +D+ TT + L G+ D +F+GG P
Sbjct: 951 P--LNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTL---GAKNLDLKGDLFVGGVP 1001
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 131/332 (39%), Gaps = 75/332 (22%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKH------------IDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT ++F K +D+ A+ + DG ++ + GSG
Sbjct: 472 ISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTK 531
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ +K + DGEW+ V+F R SG + I+ V G S+ L++ P YLGGVP +
Sbjct: 532 TLALNKKVNDGEWYHVDFQRDGKSGTISIN-SVRTPYLCPGDSELLDLDDPLYLGGVPES 590
Query: 138 TSTLV----RGNLGLNDTFVGCLRNLKSNNKLVQDKHT-----SSGVIPCSDKTESG--- 185
+S V + LN +VGC+R+L + + V + ++GV P K SG
Sbjct: 591 SSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCV 650
Query: 186 ------------------------------------VFFYNSGGYVKGVEQFRVGREMEL 209
+ ++ ++K QF E
Sbjct: 651 SEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLK--VQFSAAMHTEA 708
Query: 210 KMDVKPRNIS----GLLLSVHSKK--DYFILQMIDGSVKATVDNGKGPISAIYTPSDPYF 263
+ DV R S G+L++ S D L++ G V+ TV+ I+ +
Sbjct: 709 E-DVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESL 767
Query: 264 FC-----DGQWHTIVAIKTKNVISVAVDSMTT 290
F D +WHT+ I+ + ++VD + T
Sbjct: 768 FAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPT 799
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
DY+ L++ G + FN G+ + + KL+ DG +H V +R + L++D V E
Sbjct: 1145 DYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIE 1204
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 131/317 (41%), Gaps = 48/317 (15%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G++ + + DYV L +K+G + N GSG + + D EWH V+
Sbjct: 282 TLQRNGLMLHTGKIA--DYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVK 339
Query: 95 FSR--QQLSG------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
R +Q SG + +DG + G ++ L Y+GG P ST
Sbjct: 340 VLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSP---STADLPGS 396
Query: 147 GLNDTFVGCLRNL--KSNNKLVQ---------DKHTSSGVIP--CSDKTESGVFFYNSGG 193
+++ F+GCLR + K+N+ ++ K GV+ C + +
Sbjct: 397 PVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPE 456
Query: 194 YVKGVEQFRVGREMELKMDVKPRNISGLLL---------------SVHSKKDYFILQMID 238
+ ++ + + D + +GLLL V K D+F ++M+D
Sbjct: 457 SFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLD 516
Query: 239 GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPP 298
G + +D G G + DG+W+ + + +++++S+ T P L P
Sbjct: 517 GLLYLLLDMGSGTTKTLALNKK---VNDGEWYHVDFQRDGKSGTISINSVRT--PYLCPG 571
Query: 299 GSSETDTNNAVFIGGHP 315
S D ++ +++GG P
Sbjct: 572 DSELLDLDDPLYLGGVP 588
>sp|Q07310|NRX3A_RAT Neurexin-3 OS=Rattus norvegicus GN=Nrxn3 PE=1 SV=1
Length = 1578
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 152/382 (39%), Gaps = 100/382 (26%)
Query: 30 FSIDIKTTSEQDGIIFYV-------ADVK-----HIDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT E +G+I DV+ +D+ A+ + DG ++ + GSG +
Sbjct: 475 ISFDFRTT-EPNGLILLTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMGSGTIK 533
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLGG+P N
Sbjct: 534 VKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GQSEILDLEGDMYLGGLPEN 592
Query: 138 TSTLV----RGNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGV------------- 175
+ L+ LN +VGC+R+L N + + + ++GV
Sbjct: 593 RAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCD 652
Query: 176 -IPCSD-------------------------KTESGVFFYNSGGYVKGVEQFRVGREMEL 209
PC + + E+ + Y+ Y+K + + E E
Sbjct: 653 SYPCKNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKVIMPMVMHTEAE- 711
Query: 210 KMDVKPRNIS----GLLLSVHSK--KDYFILQMIDGSVKATV---------DNGKGPISA 254
DV R +S GLL++ S+ D L++ G VK V ++ KGP
Sbjct: 712 --DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGP-ET 768
Query: 255 IYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGH 314
+Y D +WHT+ ++ + + VD D +G H
Sbjct: 769 LYAGQK---LNDNEWHTVRVVRRGKSLKLTVDD----------------DVAEGTMVGDH 809
Query: 315 PFLSLSSKKSGPRTKRRSVFLI 336
L + ++G T++R + ++
Sbjct: 810 TRLEFHNIETGIMTEKRYISVV 831
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 119/323 (36%), Gaps = 68/323 (21%)
Query: 28 FDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILD 87
F F ++ T G++ Y+ D D++ L + DG++ F+ + S +K + D
Sbjct: 53 FQFKTNVST-----GLLLYLDDGGVCDFLCLSLVDGRVQLRFSMDCAETTVLS-NKQVND 106
Query: 88 GEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGN 145
WH + SR ++ L IDG+ + GE + +++ +LGG P + S L
Sbjct: 107 SSWHFLMVSRDRVRTGLVIDGEGQS-GELRAQRPYMDVVSDLFLGGGPADIRPSALTLDG 165
Query: 146 LGLNDTFVGCLRNLKSNNK-----------------------------LVQDKH------ 170
+ F G + +LK N + D H
Sbjct: 166 VQNMPGFKGLMLDLKYGNSEPRLLGSQSVQLEAEGPCGERPCENGGICFLLDGHPTCDCS 225
Query: 171 -TSSGVIPCSDKTESGV----FFYNSGGYVKGVEQ----FRVGREM-------------- 207
T G CS+ G + G K E+ FR +
Sbjct: 226 TTGYGGTLCSEDVSQGPGLSHLMMSEQGRSKAREENVATFRGSEYLSYDLSQNPIQSSSS 285
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + DG+V ++ G G AI P + F D
Sbjct: 286 EITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DN 344
Query: 268 QWHTIVAIKTKNVISVAVDSMTT 290
WH + + ++++VD + T
Sbjct: 345 AWHDVKVTRNLRQVTISVDGILT 367
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 112/286 (39%), Gaps = 31/286 (10%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 709 EAEDVSFRFMSQRAYGLLVATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNS 762
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D VAEG G L
Sbjct: 763 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLTVDDD-VAEGTMVGDHTRLEFH----- 815
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 816 -NIETGIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIA 874
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFI-LQMIDGSVK 242
V F Y+ + + M L K + G +L + FI ++++ G +
Sbjct: 875 DPVTFKTKSSYLT-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGNNFIAVELVKGYIH 933
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDS 287
D G GP + I SD D QWH +V + N S+ VD+
Sbjct: 934 YVFDLGNGP-NVIKGNSDRPLN-DNQWHNVVITRDNSNTHSLKVDT 977
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 127/309 (41%), Gaps = 41/309 (13%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G+I + K DYV L +KDG + N GSG + + D WH V+
Sbjct: 293 TWQRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVK 350
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVG 154
+R + +DG + G ++ L Y+G P ST +++ F+G
Sbjct: 351 VTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDSSYVGPSP---STADLPGSPVSNNFMG 407
Query: 155 CLRNL--KSNN-KLVQDKHTSSG----------VIPCSD-KTESGVFFYNSGGYVKGVEQ 200
CL+ + K+N+ +L + G V C + T + F Y+ + +
Sbjct: 408 CLKEVVYKNNDIRLELSRLARIGATKMKIYGEVVFKCENVATLDPINFETPEAYIS-LPK 466
Query: 201 FRVGREMELKMDVKPRNISGLLLSVH--------------SKKDYFILQMIDGSVKATVD 246
+ R + D + +GL+L H +K D+F ++++DG++ +D
Sbjct: 467 WNTKRMGSISFDFRTTEPNGLILLTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLD 526
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTN 306
G G I T DG+W+ + + +++V+S T P S D
Sbjct: 527 MGSGTIKVKATQKKAN---DGEWYHVDIQRDGRSGTISVNSRRT--PFTASGQSEILDLE 581
Query: 307 NAVFIGGHP 315
+++GG P
Sbjct: 582 GDMYLGGLP 590
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 36 TTSEQDGIIFYVADVKHI-DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVE 94
+T+ +DG++ + + D++ L+++ G+I FN G+ +++ + DG++H V
Sbjct: 1127 STTVKDGVLVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVR 1186
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSS 120
F+R + L++D V E G++
Sbjct: 1187 FTRNGANATLQVDNWPVNEHYPTGNT 1212
>sp|P31696|AGRIN_CHICK Agrin OS=Gallus gallus GN=AGRN PE=1 SV=3
Length = 2081
Score = 62.8 bits (151), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 38 SEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSR 97
+E G++ Y + D+++L + G + FN GSG ++S + + G+WH + +R
Sbjct: 1419 TELSGLLLYNGQNRGKDFISLALVGGFVELRFNTGSGTGVITSKVR-VEPGKWHQLVVNR 1477
Query: 98 QQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR 157
+ SG L +DG+ V+ GES + LN+ ++GG P + +V G +R
Sbjct: 1478 NRRSGMLAVDGEHVS-GESPTGTDGLNLDTDLFVGGAPEDQMAVVAERTAATVGLKGSIR 1536
Query: 158 NLKSNNKLVQDKHTSSGVIPCSDKTESG 185
L NN++ + S V+ S E G
Sbjct: 1537 LLDVNNQMYDLREKGSDVLYGSGVGECG 1564
Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
F + IKT + Q I++ ++ DY+AL + DG + ++ GS P+ L S I
Sbjct: 1929 FELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMMYDLGSKPVVLRSTVP-INTNH 1987
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLN 149
W ++ R Q G L++ + G S + L+ G +LGG+ S + +
Sbjct: 1988 WTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGME-RLSVAHKLPKAYS 2046
Query: 150 DTFVGCLRNLKSNNK---LVQDKHTSSGVIPCSDK 181
F+GC+R++ + + LV+D + ++ CS K
Sbjct: 2047 TGFIGCIRDVIVDRQELHLVEDALNNPTILHCSAK 2081
Score = 55.5 bits (132), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 42 GIIFY---VADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQ 98
G+IFY D K D+V+L + DG + Y ++ G G L S + + L+ W +V R
Sbjct: 1689 GMIFYNGQKTDGKG-DFVSLALHDGYLEYRYDLGKGAAVLRSKEPVPLN-TWISVLLERS 1746
Query: 99 QLSGKLKIDGQVVAEGESKGSSKT----LNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVG 154
G ++I+ GES S K LN+ PFY+GG P + S L R ++ +F G
Sbjct: 1747 GRKGVMRINNGERVMGESPKSRKVPHAFLNLKEPFYVGGAP-DFSKLARA-AAISTSFYG 1804
Query: 155 CLRNLKSNN-KLVQDKHTSSGVI-------PCSDK 181
++ + L++++H S V PC+ K
Sbjct: 1805 AVQRISIKGVPLLKEQHIRSAVEISTFRAHPCTQK 1839
Score = 37.0 bits (84), Expect = 0.20, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 209 LKMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
++ +K GL+L + DY L ++DG V+ D G P+ + + P
Sbjct: 1929 FELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMMYDLGSKPV--VLRSTVP--IN 1984
Query: 266 DGQWHTIVAIKTKNVISVAVDSMTTDKP--GLGPPGSSETDTNNAVFIGGHPFLSLSSK 322
W I A + + S+ V + + P G P G+++ DT+ A+++GG LS++ K
Sbjct: 1985 TNHWTHIKAYRVQREGSLQVGN---EAPITGSSPLGATQLDTDGALWLGGMERLSVAHK 2040
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 62.4 bits (150), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 49/195 (25%)
Query: 24 FKNKFDFSIDIK-TTSEQDGIIFYVA--DVKHIDYVALYVKDGQIHYSFNCGSGPMALSS 80
+ +F F++ + T E+DG++ Y + KH D+VAL V Q+ +F+ G +S
Sbjct: 1383 LRQRFHFTLALSFATKERDGLLLYNGRFNEKH-DFVALEVIQEQVQLTFSAGESTTTVSP 1441
Query: 81 ---GDKLILDGEWHTVEFS----------------RQQLSGKLKIDG------------- 108
G + DG+WHTV+ +Q + +DG
Sbjct: 1442 FVPGG--VSDGQWHTVQLKYYNKPLLGQTGLPQGPSEQKVAVVTVDGCDTGVALRFGSVL 1499
Query: 109 ---QVVAEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
A+G GS K+L++ GP LGGVP L S VR FVGC+RNL+ +++
Sbjct: 1500 GNYSCAAQGTQGGSKKSLDLTGPLLLGGVPDLPESFPVRMR-----QFVGCMRNLQVDSR 1554
Query: 165 LVQ--DKHTSSGVIP 177
+ D ++G +P
Sbjct: 1555 HIDMADFIANNGTVP 1569
>sp|Q9DDD0|NRX1A_CHICK Neurexin-1 (Fragment) OS=Gallus gallus GN=NRXN1 PE=2 SV=1
Length = 1363
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 125/320 (39%), Gaps = 49/320 (15%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS + AD ++ V L V I + N
Sbjct: 594 EAEDVSLRFRSQRAYGILMATTSRES------ADTLRLELDAGRVKLTVNLDCIRINCNS 647
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLN------- 124
GP L +G L D EWHTV R+ S KL +D Q G+ G L
Sbjct: 648 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLMVDDQQAMTGQMAGDHTRLEFHNIETG 706
Query: 125 -IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTE 183
I YL VP N F+G L++L N D + + C
Sbjct: 707 IITERRYLSSVPSN--------------FIGHLQSLTFNGMAYIDLCKNGDIDYCELNAR 752
Query: 184 SG--------VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFIL 234
G V F YV + + M L K ++ GL+L + D+ ++
Sbjct: 753 FGFRNIIADPVTFKTKASYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVV 811
Query: 235 QMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI-VAIKTKNVISVAVDSMTTDKP 293
+++ G + D G G + + P D QWH + ++ T N+ +V +D+ T +
Sbjct: 812 ELVKGYLHYVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTNNLHTVKIDTKITTQ- 868
Query: 294 GLGPPGSSETDTNNAVFIGG 313
G+ D + ++IGG
Sbjct: 869 --STAGARNLDLKSDLYIGG 886
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 158/382 (41%), Gaps = 93/382 (24%)
Query: 30 FSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT E +G+I + D KH +D+ A+ + DG ++ + GSG +
Sbjct: 360 ISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLLDMGSGTIK 418
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLGG+P N
Sbjct: 419 IKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDDLYLGGLPEN 477
Query: 138 TSTLV----RGNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGVIP-CSDKT----- 182
+ LV LN +VGC+R+L + + + + +++GV P CS +T
Sbjct: 478 KAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRETAKPCL 537
Query: 183 ---------------------------------ESGVFFYNSGGYVKGVEQFRVGREME- 208
E+ + Y+ ++K + E E
Sbjct: 538 SNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCEREATILSYDGSMFMKIQLPVVMHTEAED 597
Query: 209 LKMDVKPRNISGLLLSVHSKK--DYFILQMIDGSVKATV---------DNGKGPISAIYT 257
+ + + + G+L++ S++ D L++ G VK TV ++ KGP +
Sbjct: 598 VSLRFRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAG 657
Query: 258 PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFL 317
Y D +WHT+ ++ + + VD D+ + G H L
Sbjct: 658 ----YNLNDNEWHTVRVVRRGKSLKLMVD----DQQAM-----------TGQMAGDHTRL 698
Query: 318 SLSSKKSGPRTKRRSVFLINAN 339
+ ++G T+RR + + +N
Sbjct: 699 EFHNIETGIITERRYLSSVPSN 720
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 124/312 (39%), Gaps = 59/312 (18%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G++ + K DYV L +K+G + N GSG + + D WH V+
Sbjct: 163 TLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK 220
Query: 95 FSR--QQLSG-------------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+R +Q SG + +DG + G ++ L FY+GG P S
Sbjct: 221 VTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---S 277
Query: 140 TLVRGNLGLNDTFVGCLRNLKSNNKLVQ-----------DKHTSSGVIP--CSDKTESGV 186
T +++ F+GCL+ + N V+ K GV+ C +
Sbjct: 278 TADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDP 337
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK--------------DYF 232
+ + + ++ + + D + +GL+L H K D+F
Sbjct: 338 ITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFF 397
Query: 233 ILQMIDGSVKATVDNGKG--PISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTT 290
++M+DG + +D G G I A+ + DG+W+ + + +++V+++ T
Sbjct: 398 AIEMLDGHLYLLLDMGSGTIKIKALQKKVN-----DGEWYHVDFQRDGRSGTISVNTLRT 452
Query: 291 DKPGLGPPGSSE 302
PG SE
Sbjct: 453 PYTA---PGESE 461
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
DY+ L++ G+I FN G+ +A+ + +I DG++H V F+R + L++D V E
Sbjct: 1032 DYLELHIHQGKIGVKFNVGTDDIAIEEINAIINDGKYHVVRFTRSGGNATLQVDNWPVIE 1091
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 156 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 214
Query: 268 QWHTI 272
WH +
Sbjct: 215 AWHDV 219
>sp|A1XQX0|NR1AA_DANRE Neurexin-1a OS=Danio rerio GN=nrxn1a PE=2 SV=1
Length = 1491
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 143/347 (41%), Gaps = 80/347 (23%)
Query: 53 IDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVA 112
+D+ A+ + DG ++ + GSG + +K + DGEW+ V+F R SG + ++ +
Sbjct: 527 VDFFAIEMLDGHLYLLLDMGSGTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVN-SIRT 585
Query: 113 EGESKGSSKTLNIFGPFYLGGVPLNTSTLV----RGNLGLNDTFVGCLRNL-----KSNN 163
+ G S+ L++ YLGG+P + + L+ LN +VGC+R+L +
Sbjct: 586 PYNAPGESEILDLDDKLYLGGLPEDRAGLIFPTEVWTALLNYGYVGCVRDLFMDGQSKDI 645
Query: 164 KLVQDKHTSSGVIP-CSDKTESGVF---FYNSGGYVKGVEQF--------RVGREME--- 208
+ + + + GV P CS + NSG +G ++ +GR E
Sbjct: 646 RRIAEAQRAVGVKPSCSKEPPKQCLSNPCLNSGTCREGWNRYVCDCSGTGYLGRSCERDA 705
Query: 209 ----------------LKMDVKPRNIS---------GLLLSVHSKK--DYFILQMIDGSV 241
+ M + ++S G+L++ S+ D L++ G V
Sbjct: 706 TILSYDGSKFMKIQLPVVMHTEAEDVSLRFRSQRAYGVLMATTSQNSADTLRLELDGGRV 765
Query: 242 KATVD---------NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDK 292
+ TV+ KGP I++ + D +WHT+ ++ + + VD + +
Sbjct: 766 RLTVNLDCIRINCTTSKGP-ETIFSGQN---LNDNEWHTVRVVRRGKSLKLMVDDL---Q 818
Query: 293 PGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINAN 339
P G G H L + ++G T++R + + +N
Sbjct: 819 PSEGQ------------ITGDHTQLEFHNVETGIVTEKRYMPAVPSN 853
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 139/327 (42%), Gaps = 60/327 (18%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G++ + K DYV L +K+G + N GSG + + D WH V+
Sbjct: 294 TLQRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK 351
Query: 95 FSR--QQLSG-------------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+R +Q SG + +DG + G ++ L FY+GG P S
Sbjct: 352 VTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---S 408
Query: 140 TLVRGNLGLNDTFVGCLRNL--KSNN---------KLVQDKHTSSGVIP--CSD-KTESG 185
T +++ F+GCL+ + K+N+ KL K SGV+ C + T
Sbjct: 409 TADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKLGDPKMKVSGVVAFKCENVATLDP 468
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK---------------- 229
V F ++ ++++ + + D + +GLLL H K
Sbjct: 469 VTFETPESFIT-LDKWSAKKAGSISFDFRTTEPNGLLLFSHGKPKPQQQKDPKSPKTLKV 527
Query: 230 DYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMT 289
D+F ++M+DG + +D G G T + DG+W+ + + +++V+S+
Sbjct: 528 DFFAIEMLDGHLYLLLDMGSG---TTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNSIR 584
Query: 290 TDKPGLGPPGSSET-DTNNAVFIGGHP 315
T PG SE D ++ +++GG P
Sbjct: 585 TP---YNAPGESEILDLDDKLYLGGLP 608
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 111/304 (36%), Gaps = 63/304 (20%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++KT S G++ Y D D++ L + +G++ F+ A D + D
Sbjct: 50 EMSFNMKTKSAH-GLLVYFDDEGFCDFLELLIHNGRLSLRFSIFCAEPATVFSDTAVNDS 108
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V R + L +D + + E K + + +F +LGG+P L + L +
Sbjct: 109 RWHAVTLRRNFKNTTLVVDEE-IKWVEVKSKRRDMTVFSHLFLGGIPPELRSVALRLTSS 167
Query: 147 GLNDT--FVGCLRNLK-------------SNNKLVQDKH-----------TSSGVIPCSD 180
+ D + G + NL+ N+ + + H + CS+
Sbjct: 168 AIKDEVPYKGWITNLRVNGSEPVLIGSDGVNSDICEADHICLNGGVCSIVNDEPICDCSE 227
Query: 181 KTESGVFFYNSGGYVKGVEQFRVG-----REMELKM-----------DVKPRNI------ 218
G YV G+ +G +E E M D+ P I
Sbjct: 228 TGFQGKDCSEEEAYVGGLAHLMMGDQGKRKEREEYMATFKGSEYFCYDLSPNPIQSSSDE 287
Query: 219 ----------SGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQ 268
+GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 288 ITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DNA 346
Query: 269 WHTI 272
WH +
Sbjct: 347 WHDV 350
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 119/312 (38%), Gaps = 33/312 (10%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + + + TTS+ AD ++ V L V I +
Sbjct: 727 EAEDVSLRFRSQRAYGVLMATTSQNS------ADTLRLELDGGRVRLTVNLDCIRINCTT 780
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP + SG L D EWHTV R+ S KL +D +EG+ G L
Sbjct: 781 SKGPETIFSGQNLN-DNEWHTVRVVRRGKSLKLMVDDLQPSEGQITGDHTQLEFH----- 834
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
V T R + F+G L+ L N D + + C G
Sbjct: 835 -NVETGIVTEKRYMPAVPSNFIGHLQGLSFNGMSYIDLCKNGDIDYCELNAMIGYRSIVA 893
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK-KDYFILQMIDGSVK 242
V F + YV + + M L K + GL+L D+ +++++ G +
Sbjct: 894 DPVTFKSRSSYVT-LPTLQAYYSMHLFFQFKTTSPDGLILYNRGDGNDFIVVELVKGYLH 952
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTI-VAIKTKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + P D WH + ++ T N+ +V +D+ T + + G+
Sbjct: 953 YVSDLGNGAHLIKGNSNTP--LNDNHWHNVMISRDTNNLHTVKIDTKITTQTTM---GAK 1007
Query: 302 ETDTNNAVFIGG 313
D +++GG
Sbjct: 1008 NLDLKGDLYVGG 1019
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 36 TTSEQDGIIFYVADVKHI-DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVE 94
+T ++D ++ V + DY+ L ++ G I FN G+ + + K + DG++H V
Sbjct: 1146 STQQKDAVLVRVDSSSGLGDYLQLQIERGNIKVVFNVGTDDINIEETSKFVNDGKYHIVR 1205
Query: 95 FSRQQLSGKLKIDGQVVAE 113
F+R + L++D V E
Sbjct: 1206 FTRSGGNATLQVDDLPVIE 1224
>sp|Q9C0A0|CNTP4_HUMAN Contactin-associated protein-like 4 OS=Homo sapiens GN=CNTNAP4 PE=1
SV=3
Length = 1308
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 124/313 (39%), Gaps = 41/313 (13%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG------DKLILDGEW 90
T + DGI+ + + + D++ L ++ ++ N G + +S L+ D W
Sbjct: 214 TMQSDGILLH-REGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQHW 272
Query: 91 HTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLND 150
H+V R +D + ++G +N+ GG+P ++ +
Sbjct: 273 HSVLIQRLGKQVNFTVD-EHRHHFHARGEFNLMNLDYEISFGGIPAPGKSVSFPH----R 327
Query: 151 TFVGCLRNLKSNNKLVQD--KHTSSGVIP-------CSDKTESGVFFYNSGGYVKGVEQF 201
F GCL NL N + D K +I CS V F +S Y+ + F
Sbjct: 328 NFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYL-ALPDF 386
Query: 202 RVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTP--- 258
E+ + N +GLLL + LQ+I G + + +GK S +Y P
Sbjct: 387 SGEEEVSATFQFRTWNKAGLLL-------FSELQLISGGILLFLSDGKLK-SNLYQPGKL 438
Query: 259 ----SDPYFFCDGQWHTIVAIKTKNVISVAVD-SMTTDKPGLGPPGSSETDTNNAVFIGG 313
+ DGQWH++ KN +SVAVD M + P LGP + + + GG
Sbjct: 439 PSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGP---EQIYSGGTYYFGG 495
Query: 314 HPFLSLSSKKSGP 326
P S SK P
Sbjct: 496 CPDKSFGSKCKSP 508
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 18/170 (10%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQI-HYS 68
+++S + +PT G D S KTT+ G+ ++ ++ D++ + ++ + +S
Sbjct: 799 TEASYLHFPTFHGELSA--DVSFFFKTTAS-SGV--FLENLGIADFIRIELRSPTVVTFS 853
Query: 69 FNCGSGPMALSSGDKLIL-DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
F+ G+GP +S D +WH V R L++D + L
Sbjct: 854 FDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVL---- 909
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIP 177
+ LN+ V G F+GC+R+L+ N + D + V P
Sbjct: 910 ------LQLNSQLFVGGTATRQRGFLGCIRSLQLNG-MTLDLEERAQVTP 952
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 208 ELKMDV----KPRNISGLLLSVHSKKDYFILQMIDGSVKA-TVDNGKGPISAIYTPSDPY 262
EL DV K SG+ L D+ +++ +V + D G GP + P
Sbjct: 812 ELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEI--SVQSPT 869
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
F D QWH + + S+ VD +T G N+ +F+GG
Sbjct: 870 HFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGG 920
>sp|Q9QYP2|CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus
norvegicus GN=Celsr2 PE=2 SV=1
Length = 2144
Score = 61.6 bits (148), Expect = 9e-09, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 50/200 (25%)
Query: 24 FKNKFDFSIDIK-TTSEQDGIIFYVA--DVKHIDYVALYVKDGQIHYSFNCGSGPMALSS 80
+ +F F++ + T E+DG++ Y + KH D+VAL V Q+ +F+ G +S
Sbjct: 608 LRQRFHFTLALSFATKERDGLLLYNGRFNEKH-DFVALEVIQEQVQLTFSAGESTTTVSP 666
Query: 81 ---GDKLILDGEWHTVEFS----------------RQQLSGKLKIDG------------- 108
G + DG+WHTV+ +Q + +DG
Sbjct: 667 FVPGG--VSDGQWHTVQLKYYNKPLLGQTGLPQGPSEQKVAVVSVDGCDTGVALRFGAML 724
Query: 109 ---QVVAEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
A+G GS K+L++ GP LGGVP L S VR FVGC++NL+ +++
Sbjct: 725 GNYSCAAQGTQGGSKKSLDLTGPLLLGGVPDLPESFPVRMR-----HFVGCMKNLQVDSR 779
Query: 165 LVQ--DKHTSSGVIP-CSDK 181
V D ++G +P C K
Sbjct: 780 HVDMADFIANNGTVPGCPTK 799
>sp|Q63374|NRX2A_RAT Neurexin-2 OS=Rattus norvegicus GN=Nrxn2 PE=1 SV=3
Length = 1715
Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTVEF 95
T+ DG++ + + + D++ + + G IHY F+ G+GP + + DK + D +WH V
Sbjct: 951 TTAPDGLLLFNSGNGN-DFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNVVV 1009
Query: 96 SRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVG 154
SR + LKID + V + S G+ + L++ G Y+GG+ N + + + D F G
Sbjct: 1010 SRDPGNVHTLKIDSRTVTQ-HSNGA-RNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQG 1067
Query: 155 CLRNLKSNNKL 165
CL ++ N +L
Sbjct: 1068 CLASVDLNGRL 1078
Score = 58.9 bits (141), Expect = 6e-08, Method: Composition-based stats.
Identities = 75/320 (23%), Positives = 121/320 (37%), Gaps = 47/320 (14%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN----- 70
E ++ RF ++ + + + TTS + D + L + GQ+ + N
Sbjct: 752 EAEDVSLRFMSQRAYGLMMATTSRESA-----------DTLRLELDGGQMKLTVNLDCLR 800
Query: 71 -------CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
G GP L +G KL D EWHTV R+ S +L +D V EG+ G+ L
Sbjct: 801 VGCAPSAAGKGPETLFAGHKLN-DNEWHTVRVVRRGKSLQLSVD-NVTVEGQMAGAHTRL 858
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTE 183
+ T R + F+G L L N + D+ + C
Sbjct: 859 EFH------NIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCKDGDITYCELNAR 912
Query: 184 SG--------VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFIL 234
G V F + Y+ + + M L K GLLL + + D+ ++
Sbjct: 913 FGLRAIVADPVTFKSRSSYL-ALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVI 971
Query: 235 QMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTK-NVISVAVDSMTTDKP 293
+++ G + D G GP P D QWH +V + NV ++ +DS T +
Sbjct: 972 ELVKGYIHYVFDLGNGPSLMKGNSDKP--VNDNQWHNVVVSRDPGNVHTLKIDSRTVTQH 1029
Query: 294 GLGPPGSSETDTNNAVFIGG 313
G+ D ++IGG
Sbjct: 1030 S---NGARNLDLKGELYIGG 1046
Score = 52.4 bits (124), Expect = 5e-06, Method: Composition-based stats.
Identities = 84/387 (21%), Positives = 156/387 (40%), Gaps = 102/387 (26%)
Query: 31 SIDIKTTSEQDGIIFYV------------ADVKHIDYVALYVKDGQIHYSFNCGSGPMAL 78
S+D +TT E +G++ + + + DY A+ + DG ++ + GSG + L
Sbjct: 518 SLDFRTT-EPNGLLLFSQGRRAGAGVGSHSSSQRADYFAMELLDGYLYLLLDMGSGGIKL 576
Query: 79 SSGDKLILDGEWHTVEFSRQQLSGKLKIDGQ---VVAEGESKGSSKTLNIFGPFYLGGVP 135
+ + + DGEW V+F R G + ++ + +A GE S+ L++ YLGG+P
Sbjct: 577 RASSRKVNDGEWCHVDFQRDGRKGSISVNSRSTPFLATGE----SEVLDLESELYLGGLP 632
Query: 136 LNTSTLVR-----GNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGVIP-CSDKT-- 182
+ L +VGC+R+L + + + + + GV P CS +T
Sbjct: 633 EGGRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLK 692
Query: 183 ------------------------------------ESGVFFYNSGGYVKGVEQFRVGRE 206
E+ V Y+ Y+K + + E
Sbjct: 693 QCASAPCRNGGICREGWNRFVCDCIGTGFLGRVCEREATVLSYDGSMYMKIMLPNAMHTE 752
Query: 207 MELKMDVKPRNIS----GLLLSVHSKK--DYFILQMIDGSVKATVD-----NGKGPISAI 255
E DV R +S GL+++ S++ D L++ G +K TV+ G P +A
Sbjct: 753 AE---DVSLRFMSQRAYGLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSAAG 809
Query: 256 YTPSDPYF---FCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG 312
P + D +WHT+ ++ + ++VD++T + G
Sbjct: 810 KGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVE----------------GQMAG 853
Query: 313 GHPFLSLSSKKSGPRTKRRSVFLINAN 339
H L + ++G T+RR + ++ +N
Sbjct: 854 AHTRLEFHNIETGIMTERRFISVVPSN 880
Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++T + + ++ Y+ D D++ L + DG++ F A D + D
Sbjct: 52 ELSFSLRTNATR-ALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADD 110
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V +R L +DG+ A E + + + + ++GG+P + S L +
Sbjct: 111 RWHMVLLTRDARRTALAVDGEARA-AEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 169
Query: 147 GLNDTFVGCLRNLK 160
F G L NLK
Sbjct: 170 KYEPPFRGLLANLK 183
Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 75/323 (23%), Positives = 130/323 (40%), Gaps = 54/323 (16%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G++ + K DYV L +K G + N GSG + + D WH V
Sbjct: 320 TLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVR 377
Query: 95 FSR--QQLSG-------------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+R +Q +G + +DG + G ++ L FY+GG P NT+
Sbjct: 378 VTRNLRQHAGIGHAMVNKLHYLVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSP-NTA 436
Query: 140 TLVRGNLGLNDTFVGCLRNL--KSNN-KLVQDKHTSSG----------VIPCSDKTESGV 186
L + N F+GCL+++ K+N+ KL + G C D
Sbjct: 437 DLPGSPVSNN--FMGCLKDVVYKNNDFKLELSRLAKEGDPKMKLQGDLSFRCEDVAALDP 494
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL--------------SVHSKKDYF 232
+ S + ++ R + +D + +GLLL S + DYF
Sbjct: 495 VTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLLFSQGRRAGAGVGSHSSSQRADYF 554
Query: 233 ILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDK 292
++++DG + +D G G I + DG+W + + S++V+S +T
Sbjct: 555 AMELLDGYLYLLLDMGSGGIKLRASSRK---VNDGEWCHVDFQRDGRKGSISVNSRST-- 609
Query: 293 PGLGPPGSSETDTNNAVFIGGHP 315
P L S D + +++GG P
Sbjct: 610 PFLATGESEVLDLESELYLGGLP 632
Score = 40.8 bits (94), Expect = 0.017, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
DY+ L++ G + FN G+ + + + ++ DG++H V F+R + L++D V E
Sbjct: 1192 DYLQLHIDQGTVGVIFNVGTDDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVDSWPVNE 1251
Query: 114 GESKGS 119
G+
Sbjct: 1252 RYPAGN 1257
Score = 31.6 bits (70), Expect = 9.8, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 19/125 (15%)
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E+ L RN GL+L DY L + G+V ++ G G A+ P + F
Sbjct: 313 EITLAFRTLQRN--GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGK-FN 369
Query: 266 DGQWHTI---------------VAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVF 310
D WH + + K +++++VD + T G + +++ +
Sbjct: 370 DNAWHDVRVTRNLRQHAGIGHAMVNKLHYLVTISVDGILTTT-GYTQEDYTMLGSDDFFY 428
Query: 311 IGGHP 315
IGG P
Sbjct: 429 IGGSP 433
>sp|A1XQX8|NR3AA_DANRE Neurexin-3a OS=Danio rerio GN=nrxn3a PE=2 SV=1
Length = 1697
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 109/308 (35%), Gaps = 74/308 (24%)
Query: 28 FDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG--QIHYSFNCGSGPMALSSGDKLI 85
F F D+ T +I Y D D++ L V +G Q+ +S +C + DK +
Sbjct: 49 FQFKTDVST-----ALILYFDDGGFCDFLQLMVVEGKLQLQFSIDCAETTVV---SDKRV 100
Query: 86 LDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVR 143
D WH+ SR L L +DG V E + + + I +LGGVP + S L
Sbjct: 101 NDSSWHSATLSRYNLRTVLGLDG-VSKWAEVRPLRQYMKIVSDLFLGGVPQDIRISVLTL 159
Query: 144 GNLGLNDTFVGCLRNLK---------SNNKLVQDKHTSSGVIPCSD-------------- 180
+ F G +R LK S+ ++ D PC +
Sbjct: 160 PTVKDLPPFKGIIRELKYNSKEPILLSSQRVRMDIEGICMENPCENGGTCSVVDGEPLCD 219
Query: 181 --KTE-SGVFFYNSGGYVKG------------------VEQFRVGREM------------ 207
KTE G F + G V FR G E
Sbjct: 220 CSKTEYVGRFCNEEANNIPGFAHMMMADQAKGKAREENVATFR-GSEFFCYDLSQNPIQS 278
Query: 208 ---ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFF 264
E+ + K +GL+L DY L + DG+V ++ G G AI P + F
Sbjct: 279 SSDEITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGK-F 337
Query: 265 CDGQWHTI 272
D WH +
Sbjct: 338 NDNSWHDV 345
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 152/382 (39%), Gaps = 100/382 (26%)
Query: 30 FSIDIKTTSEQDGIIFYV-------ADVK-----HIDYVALYVKDGQIHYSFNCGSGPMA 77
S D +TT E +G+I + D + +D+ A+ + DG ++ + GSG +
Sbjct: 486 ISFDFRTT-EPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGSLYLLLDMGSGTIK 544
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLN 137
+ + + DG W+ V+ R SG + ++ + S G ++ L++ G YLGG+P +
Sbjct: 545 VKATQNKVNDGAWYHVDIQRDGRSGTISVNSRRTPFTAS-GENEILDLEGDMYLGGLPDS 603
Query: 138 TSTLV----RGNLGLNDTFVGCLRNL-----KSNNKLVQDKHTSSGV------------- 175
+L+ LN +VGC+R+L + + + + +G+
Sbjct: 604 RGSLILPTELWTAMLNYGYVGCIRDLFIDGRSKDIRQIAEAQNGAGIKPSCNKMSGKQCD 663
Query: 176 -IPCSDK-------------------------TESGVFFYNSGGYVKGVEQFRVGREMEL 209
PC +K E+ + Y+ Y+K V + E E
Sbjct: 664 SYPCKNKGLCKEGWNRFICDCTGTGYWSRTCEREASILSYDGSMYMKVVMPTVMHTEAE- 722
Query: 210 KMDVKPRNIS----GLLLSVHSKKDYFILQM-IDGS-VKATV---------DNGKGPISA 254
DV R +S GLL++ S+ L++ +DGS VK TV ++ KGP
Sbjct: 723 --DVSLRFMSQRAYGLLMATTSRDSADTLRLELDGSRVKLTVNLDCIRINCNSSKGP-ET 779
Query: 255 IYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGH 314
+Y D +WHT+ I+ + VD D +G H
Sbjct: 780 LYAGQK---LNDNEWHTVRVIRRGKSYKLTVDD----------------DVAEGQMVGDH 820
Query: 315 PFLSLSSKKSGPRTKRRSVFLI 336
L + ++G T+RR V +I
Sbjct: 821 TRLEFHNIETGVMTERRFVSMI 842
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTV 93
KTTS I+F D D++A+ + G IHY FN G+GP + + ++ + D +WH V
Sbjct: 915 KTTSADGFILFNSGDGS--DFIAVELVKGYIHYVFNLGNGPNVIKGNSERALHDNQWHNV 972
Query: 94 EFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
+R + LK+D + V+ + +K L++ G ++ G+ N + + + F
Sbjct: 973 VITRDNSNVHTLKVDAKAVS--QVVNGAKNLDLKGDLFIAGLGPNMYNNLPKLVASREGF 1030
Query: 153 VGCLRNLKSNNK---LVQDKHTSSGVI 176
GCL ++ N + L+ D SG I
Sbjct: 1031 KGCLASVDLNGRLPDLINDALFRSGQI 1057
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 121/312 (38%), Gaps = 34/312 (10%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 720 EAEDVSLRFMSQRAYGLLMATTSRDS------ADTLRLELDGSRVKLTVNLDCIRINCNS 773
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D VAEG+ G L
Sbjct: 774 SKGPETLYAGQKLN-DNEWHTVRVIRRGKSYKLTVDDD-VAEGQMVGDHTRLEFH----- 826
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++LK N L D + + C G
Sbjct: 827 -NIETGVMTERRFVSMIPSSFIGHLQSLKFNGLLYIDLCKNGDIDFCELNARFGMRSIIA 885
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISG-LLLSVHSKKDYFILQMIDGSVK 242
V F + Y+ + + M L K + G +L + D+ ++++ G +
Sbjct: 886 DPVTFKSKNSYLS-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGSDFIAVELVKGYIH 944
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
+ G GP + + D QWH +V + NV ++ VD+ + G+
Sbjct: 945 YVFNLGNGP--NVIKGNSERALHDNQWHNVVITRDNSNVHTLKVDAKAVSQV---VNGAK 999
Query: 302 ETDTNNAVFIGG 313
D +FI G
Sbjct: 1000 NLDLKGDLFIAG 1011
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 134/324 (41%), Gaps = 56/324 (17%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLILDGEWHTVE 94
T +++G+I + K DYV L +KDG + N GSG + + D WH V+
Sbjct: 289 TWQRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNSWHDVK 346
Query: 95 FSR--QQLSG-------------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+R +Q SG + +DG + G ++ L FY+GG P S
Sbjct: 347 VTRNLRQHSGIGHAMVNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP---S 403
Query: 140 TLVRGNLGLNDTFVGCLRNL--KSNN---------KLVQDKHTSSG--VIPCSD-KTESG 185
T +++ F+GCL+ + K+N+ ++V K G V C + T
Sbjct: 404 TADLPGSPVSNNFMGCLKEVVYKNNDIRLELSRLARIVDPKMKIQGDVVFKCENVATLDP 463
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVH--------------SKKDY 231
+ F Y+ + ++ R + D + +GL+L H +K D+
Sbjct: 464 ISFETPEAYIS-LPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDF 522
Query: 232 FILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD 291
F ++++DGS+ +D G G I T + DG W+ + + +++V+S T
Sbjct: 523 FAVELLDGSLYLLLDMGSGTIKVKATQNK---VNDGAWYHVDIQRDGRSGTISVNSRRT- 578
Query: 292 KPGLGPPGSSETDTNNAVFIGGHP 315
P + D +++GG P
Sbjct: 579 -PFTASGENEILDLEGDMYLGGLP 601
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 36 TTSEQDGIIFYVADVKHI-DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVE 94
+TS +DGI+ + + DY+ L+++ G+I +FN G+ + + + DG++H V
Sbjct: 1147 STSLKDGILIRIDSAPGLGDYLMLHIEQGKIGVTFNIGTADITVQESSTAVNDGKYHVVR 1206
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSSKTLNI 125
F+R + L++D + E G+S I
Sbjct: 1207 FTRNGGNATLQVDNWAINEHFPSGNSDNERI 1237
>sp|Q94887|NRX4_DROME Neurexin-4 OS=Drosophila melanogaster GN=Nrx-IV PE=1 SV=2
Length = 1284
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG-QIHYSFNCGSGPMALSSGDKLIL- 86
D ++ +TT E + +IF+ DY+ L + G ++ + + GSGP+ ++ G L
Sbjct: 819 DIYLEFRTTQE-NSVIFHATGP--TDYIKLSLNGGNKLQFQYQAGSGPLGVNVGTSYHLN 875
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAE-GESKGSSKTLNIFGPFYLGGVPLNTSTLVRG- 144
D WHTV R + +L +DG + AE E G + L++ TS LV G
Sbjct: 876 DNNWHTVSVERNRKEARLVVDGSIKAEVREPPGPVRALHL------------TSDLVIGA 923
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQDKHTS 172
D +VGC+R L N K+V K S
Sbjct: 924 TTEYRDGYVGCIRALLLNGKMVDLKEYS 951
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 40/279 (14%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFS 96
T+ +G++ Y + DY AL +KD ++ + + GS M S L+ D WH V S
Sbjct: 222 TAFANGVMMYSRGTQG-DYYALQLKDNKMVLNLDLGSRVMTSLSVGSLLDDNVWHDVVIS 280
Query: 97 RQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCL 156
R Q +D +V+ G +G LN+ YLGGVP V+ L + F GCL
Sbjct: 281 RNQRDIIFSVD-RVIVRGRIQGEFTRLNLNRELYLGGVP-----NVQEGLIVQQNFSGCL 334
Query: 157 RNLKSNN----KLVQDKHTSSG----------VIPCSDKTESGVFFYNSGGYVKGVEQFR 202
N+ N+ ++++D T G + C V F +V+ ++ +
Sbjct: 335 ENIYFNSTNFIRVMKDS-TELGEGYLFTRVNTIYACPSPPIYPVTFTTRSSFVR-LKGYE 392
Query: 203 VGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPI-------SAI 255
+ + + + +G++L D++ G +K ++ GK I + I
Sbjct: 393 NSQRLNVSFYFRTYEETGVML----HHDFY----SGGYLKVFLEFGKVKIDLKVKDKARI 444
Query: 256 YTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS--MTTDK 292
+ F DG+WH+ V KN + + +D MTT K
Sbjct: 445 ILDNYDDQFNDGKWHSFVISIEKNRLILNIDQRPMTTTK 483
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,167,719
Number of Sequences: 539616
Number of extensions: 5796140
Number of successful extensions: 13294
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 12652
Number of HSP's gapped (non-prelim): 426
length of query: 348
length of database: 191,569,459
effective HSP length: 118
effective length of query: 230
effective length of database: 127,894,771
effective search space: 29415797330
effective search space used: 29415797330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)