Query psy12396
Match_columns 348
No_of_seqs 142 out of 1592
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 18:07:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12396.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12396hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jd4_A Laminin subunit alpha-1 100.0 6.8E-55 2.3E-59 408.4 39.5 333 4-345 21-357 (383)
2 1dyk_A Laminin alpha 2 chain; 100.0 1.8E-54 6.3E-59 406.6 39.3 330 4-343 35-367 (394)
3 1h30_A GAS6, growth-arrest-spe 100.0 1.1E-48 3.7E-53 370.3 27.9 323 3-347 41-398 (422)
4 3asi_A Neurexin-1-alpha; beta- 100.0 8.1E-47 2.8E-51 356.5 35.4 318 4-345 7-377 (410)
5 2wjs_A Laminin subunit alpha-2 100.0 2.4E-46 8.4E-51 370.0 38.8 327 5-347 206-544 (608)
6 2wjs_A Laminin subunit alpha-2 100.0 6.4E-47 2.2E-51 374.1 34.0 328 4-347 12-368 (608)
7 3qcw_A Neurexin-1-alpha; synap 100.0 1.3E-43 4.4E-48 374.5 35.8 332 2-347 231-597 (1245)
8 3qcw_A Neurexin-1-alpha; synap 100.0 7.6E-45 2.6E-49 383.8 19.0 332 6-346 2-390 (1245)
9 3v64_A Low-density lipoprotein 100.0 2.8E-29 9.7E-34 211.6 21.9 173 3-180 3-190 (191)
10 1pz7_A Agrin; structural prote 100.0 5.1E-29 1.8E-33 212.4 21.5 172 4-180 14-203 (204)
11 3pve_A Agrin, AGRN protein; mR 100.0 3.4E-29 1.2E-33 210.8 20.0 161 3-169 10-175 (189)
12 3sh4_A LG3 peptide; actin disa 100.0 1.6E-29 5.5E-34 213.8 16.9 172 2-180 5-195 (195)
13 1f5f_A SHBG, sex hormone-bindi 100.0 3.2E-29 1.1E-33 213.8 15.3 182 5-195 16-204 (205)
14 1d2s_A SHBG, sex hormone-bindi 100.0 1.1E-28 3.7E-33 204.0 16.1 164 3-178 6-170 (170)
15 2r16_A Neurexin-1-alpha; beta- 100.0 8.5E-28 2.9E-32 201.0 18.8 155 2-166 5-159 (182)
16 2h0b_A Neurexin-1-alpha; B-san 99.9 7.8E-27 2.7E-31 195.7 17.5 157 2-167 5-165 (184)
17 3bod_A Neurexin-1-alpha; neure 99.9 3.2E-26 1.1E-30 190.7 19.0 149 4-167 6-160 (178)
18 3v64_A Low-density lipoprotein 99.9 9.4E-26 3.2E-30 190.0 17.2 157 184-347 3-174 (191)
19 2h0b_A Neurexin-1-alpha; B-san 99.9 1.8E-25 6.1E-30 187.4 17.8 158 183-346 5-164 (184)
20 1pz7_A Agrin; structural prote 99.9 1.8E-25 6.2E-30 190.4 17.5 157 184-347 13-187 (204)
21 2r1b_A Neurexin-1-beta, neurex 99.9 1.5E-25 5.3E-30 192.6 17.0 148 4-166 12-194 (220)
22 3sh4_A LG3 peptide; actin disa 99.9 1.8E-25 6.3E-30 188.9 15.9 155 183-346 5-171 (195)
23 2r1d_A Neurexin-1-beta, neurex 99.9 3.6E-25 1.2E-29 190.7 17.9 148 2-166 40-192 (226)
24 3pve_A Agrin, AGRN protein; mR 99.9 5.3E-25 1.8E-29 185.2 17.4 154 186-347 12-173 (189)
25 3bod_A Neurexin-1-alpha; neure 99.9 3E-24 1E-28 178.8 16.1 146 185-345 6-157 (178)
26 1d2s_A SHBG, sex hormone-bindi 99.9 1.5E-24 5.2E-29 179.1 14.1 139 194-346 17-157 (170)
27 2r16_A Neurexin-1-alpha; beta- 99.9 2.3E-24 8E-29 180.1 15.3 151 184-346 6-159 (182)
28 1f5f_A SHBG, sex hormone-bindi 99.9 2.4E-23 8.1E-28 177.4 14.2 145 193-346 28-175 (205)
29 2r1b_A Neurexin-1-beta, neurex 99.9 5.8E-23 2E-27 176.5 16.5 153 177-346 5-194 (220)
30 2r1d_A Neurexin-1-beta, neurex 99.9 1.2E-22 4.1E-27 174.9 17.8 141 190-346 46-192 (226)
31 2jd4_A Laminin subunit alpha-1 99.9 4.3E-22 1.5E-26 185.9 19.7 157 184-347 20-180 (383)
32 3asi_A Neurexin-1-alpha; beta- 99.9 2.7E-22 9.3E-27 188.8 16.9 160 182-347 4-165 (410)
33 1dyk_A Laminin alpha 2 chain; 99.9 6.9E-22 2.4E-26 185.1 18.5 163 177-347 22-193 (394)
34 1h30_A GAS6, growth-arrest-spe 99.9 7.6E-22 2.6E-26 186.4 13.0 152 185-345 42-199 (422)
35 3flp_A SAP-like pentraxin; phy 98.5 8.2E-06 2.8E-10 69.2 17.9 160 4-167 8-174 (217)
36 3flp_A SAP-like pentraxin; phy 98.5 4.9E-06 1.7E-10 70.6 15.0 146 192-347 17-174 (217)
37 3kqr_A Serum amyloid P-compone 98.4 2.8E-05 9.6E-10 65.2 19.1 154 4-167 8-165 (204)
38 2v73_A CBM40, putative EXO-alp 98.4 3.5E-06 1.2E-10 68.7 12.8 132 205-347 40-179 (191)
39 2v73_A CBM40, putative EXO-alp 98.4 1.8E-05 6.2E-10 64.5 16.6 134 25-167 39-179 (191)
40 3kqr_A Serum amyloid P-compone 98.4 1.5E-05 5.2E-10 66.8 16.6 142 192-347 17-165 (204)
41 3pvn_A C-reactive protein; pen 98.4 2.4E-05 8.2E-10 65.7 17.5 155 3-167 7-167 (206)
42 3pvn_A C-reactive protein; pen 98.4 1.9E-05 6.6E-10 66.3 16.4 147 187-347 10-167 (206)
43 1za4_A Thrombospondin 1; TSP-1 98.4 9.2E-06 3.1E-10 70.4 14.4 124 205-344 72-206 (251)
44 2erf_A Thrombospondin-1; TSP-1 98.3 1.7E-05 5.7E-10 66.8 15.4 123 26-161 62-193 (209)
45 2erf_A Thrombospondin-1; TSP-1 98.3 1.3E-05 4.5E-10 67.5 14.1 125 205-345 62-197 (209)
46 1za4_A Thrombospondin 1; TSP-1 98.3 1.7E-05 5.8E-10 68.7 15.0 125 26-162 72-204 (251)
47 2uur_A Collagen alpha-1(IX) ch 98.1 0.00012 4E-09 63.1 15.8 130 24-165 84-221 (245)
48 4dqa_A Uncharacterized protein 98.0 0.00033 1.1E-08 63.9 17.0 142 4-167 142-294 (355)
49 2uur_A Collagen alpha-1(IX) ch 97.9 0.00014 5E-09 62.5 12.5 129 203-345 84-221 (245)
50 4dqa_A Uncharacterized protein 97.6 0.00041 1.4E-08 63.2 11.0 134 193-347 148-294 (355)
51 1a8d_A Tetanus neurotoxin; clo 97.1 0.041 1.4E-06 50.2 17.4 147 6-167 61-234 (452)
52 1a8d_A Tetanus neurotoxin; clo 97.0 0.02 6.8E-07 52.2 14.3 127 205-347 85-234 (452)
53 2sli_A Intramolecular trans-si 96.8 0.0085 2.9E-07 59.2 11.9 131 204-347 34-183 (679)
54 2jkb_A Sialidase B; intramolec 96.8 0.035 1.2E-06 54.9 16.0 133 26-167 57-205 (686)
55 2jkb_A Sialidase B; intramolec 96.7 0.017 5.9E-07 57.1 13.1 130 205-347 57-205 (686)
56 2sli_A Intramolecular trans-si 96.7 0.05 1.7E-06 53.7 16.1 152 5-167 12-183 (679)
57 4b1m_A Levanase; hydrolase, CB 96.4 0.017 6E-07 47.2 9.2 81 206-289 65-153 (185)
58 4b1m_A Levanase; hydrolase, CB 96.2 0.06 2.1E-06 43.9 11.6 86 25-113 63-156 (185)
59 1epw_A Bontoxilysin B, botulin 92.5 2.5 8.6E-05 43.1 14.2 131 204-347 922-1066(1290)
60 2nyy_A Botulinum neurotoxin ty 92.0 3.7 0.00013 41.9 14.7 131 204-347 937-1079(1295)
61 1epw_A Bontoxilysin B, botulin 91.2 13 0.00043 38.2 17.5 147 6-167 899-1066(1290)
62 2nyy_A Botulinum neurotoxin ty 90.7 5 0.00017 41.0 14.1 129 25-167 937-1079(1295)
63 3v0a_B NTNH; botulinum neuroto 89.7 5.4 0.00019 39.7 13.2 81 204-289 901-987 (1196)
64 4azz_A Levanase; hydrolase; 1. 88.9 0.07 2.4E-06 42.9 0.0 81 206-289 44-132 (172)
65 3v0a_B NTNH; botulinum neuroto 87.9 18 0.00062 36.2 15.4 103 6-113 881-990 (1196)
66 3zr5_A Galactocerebrosidase; h 87.2 5.5 0.00019 39.0 11.8 80 206-289 530-620 (656)
67 2gy5_A Angiopoietin-1 receptor 86.6 0.044 1.5E-06 50.9 -3.2 37 37-74 364-400 (423)
68 3rsj_A BONT/F; clostridium bot 86.3 18 0.00062 32.4 16.6 128 24-167 65-208 (413)
69 4azz_A Levanase; hydrolase; 1. 86.3 0.14 4.8E-06 41.0 0.0 86 25-112 42-134 (172)
70 3zr5_A Galactocerebrosidase; h 85.4 14 0.00047 36.2 13.6 88 25-113 528-623 (656)
71 3rsj_A BONT/F; clostridium bot 80.1 33 0.0011 30.8 15.8 129 204-347 66-208 (413)
72 3imm_A Putative secreted glyco 75.2 9.7 0.00033 31.1 7.4 88 25-113 46-145 (201)
73 3s5q_A Putative glycosylhydrol 70.8 13 0.00045 30.6 7.3 89 25-114 59-159 (214)
74 2gy5_A Angiopoietin-1 receptor 70.4 0.46 1.6E-05 44.0 -1.9 39 216-254 364-404 (423)
75 3ffz_A Botulinum neurotoxin ty 68.5 1E+02 0.0036 31.6 13.9 86 204-290 912-1012(1252)
76 3vuo_A NTNHA; protection of bo 67.7 96 0.0033 32.0 13.6 87 25-114 898-988 (1196)
77 3u1x_A Putative glycosyl hydro 67.2 16 0.00054 30.6 7.1 91 25-115 78-187 (236)
78 3vuo_A NTNHA; protection of bo 65.4 73 0.0025 32.8 12.3 82 204-290 898-985 (1196)
79 3n7l_A Neurotoxin; HCR/D-SA, g 64.7 78 0.0027 28.2 11.9 86 203-290 69-164 (424)
80 2vxr_A Botulinum neurotoxin ty 63.0 90 0.0031 28.4 12.3 87 204-290 113-214 (482)
81 3h3l_A Putative sugar hydrolas 62.4 41 0.0014 28.2 8.8 91 25-115 76-180 (241)
82 2vu9_A Botulinum neurotoxin A 59.2 1E+02 0.0035 27.8 12.4 86 204-290 85-183 (444)
83 3u1x_A Putative glycosyl hydro 59.0 14 0.00047 31.0 5.2 84 205-289 79-182 (236)
84 1ms9_A Trans-sialidase; trans- 50.0 30 0.001 33.7 6.6 76 262-347 551-627 (648)
85 3pme_A Type C neurotoxin; stru 49.5 1.4E+02 0.0049 26.5 13.3 87 204-290 66-162 (420)
86 3zyp_A CIP1; metal binding pro 48.3 1.1E+02 0.0037 24.8 11.3 87 26-112 65-161 (218)
87 1oq1_A Protein YESU; structura 44.0 1.3E+02 0.0046 24.6 8.7 34 84-117 154-187 (223)
88 3ffz_A Botulinum neurotoxin ty 42.7 3E+02 0.01 28.4 14.6 86 24-113 911-1014(1252)
89 2zzj_A Glucuronan lyase A; bet 42.2 1.5E+02 0.0051 24.7 9.2 60 55-114 109-180 (238)
90 3gne_A Val-1; alginate lyase, 38.7 24 0.00082 29.8 3.4 73 263-340 159-246 (252)
91 3pme_A Type C neurotoxin; stru 37.8 2.2E+02 0.0075 25.4 16.8 86 24-113 65-164 (420)
92 3dl3_A Tellurite resistance pr 34.6 1.3E+02 0.0043 22.1 6.4 45 229-273 37-85 (119)
93 1w0p_A Sialidase; hydrolase, n 33.1 73 0.0025 31.8 6.5 78 207-290 94-177 (781)
94 2zzj_A Glucuronan lyase A; bet 30.3 1.1E+02 0.0038 25.5 6.1 57 231-289 109-176 (238)
95 1ioa_A Arcelin-5A, ARC5A; lect 29.0 2.5E+02 0.0085 23.3 9.9 80 27-107 66-174 (240)
96 1dhk_B Bean lectin-like inhibi 25.1 2.8E+02 0.0096 22.7 9.2 79 27-107 61-151 (223)
97 2jtd_A Myomesin-1, skelemin; i 23.9 1.8E+02 0.0061 21.7 5.5 59 230-289 43-104 (142)
98 3osd_A Putative glycosyl hydro 23.4 1.3E+02 0.0044 25.5 5.6 30 86-115 177-206 (265)
99 3n7l_A Neurotoxin; HCR/D-SA, g 22.2 4.2E+02 0.014 23.6 14.3 85 24-113 69-166 (424)
100 1w0p_A Sialidase; hydrolase, n 21.7 2.2E+02 0.0074 28.4 7.5 84 24-112 90-178 (781)
101 3imm_A Putative secreted glyco 21.5 85 0.0029 25.3 3.9 83 205-289 47-142 (201)
No 1
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=100.00 E-value=6.8e-55 Score=408.39 Aligned_cols=333 Identities=27% Similarity=0.489 Sum_probs=266.2
Q ss_pred eeEeCCCCeeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeecCce
Q psy12396 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDK 83 (348)
Q Consensus 4 ~~~F~g~~~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~~~ 83 (348)
.++|+++++||++|+..+.......+|+|+|||.+ ++|+|||.++....||++|+|.+|+|+++++.|++ ...+.++.
T Consensus 21 a~~Fg~~~~S~~~~~~~~~~~~~~~~is~~frT~~-~~GlLly~~~~~~~d~~~l~L~~G~l~~~~~~g~~-~~~~~~~~ 98 (383)
T 2jd4_A 21 AHQFGLSQNSHLVLPLQQSDVRKRLQVQLSIRTFA-SSGLIYYVAHQNQMDYATLQLQEGRLHFMFDLGKG-RTKVSHPA 98 (383)
T ss_dssp CEECCSSTTCEEEEECCSCCCSSEEEEEEEEEECC-SCEEEEEEECTTSSSEEEEEEETTEEEEEEECSSC-EEEEECCC
T ss_pred ccccCCCCCeeEEEeCCchhcccceEEEEEEEcCC-CCeEEEEeCCCCCCcEEEEEEECCEEEEEEECCCC-eEEEeCcc
Confidence 37899988999999864444467899999999999 99999999875567999999999999999999998 67778889
Q ss_pred eecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeeeceEECC
Q psy12396 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNN 163 (348)
Q Consensus 84 ~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in~ 163 (348)
.++||+||+|++.|..+.+.|.||++.......++....++....+||||+|...... .......+|.|||+++.+|+
T Consensus 99 ~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~l~vGG~p~~~~~~--~~~~~~~~F~GCi~~l~in~ 176 (383)
T 2jd4_A 99 LLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGKATTLDVERKLYLGGLPSHYRAR--NIGTITHSIPACIGEIMVNG 176 (383)
T ss_dssp CCTTSSCEEEEEEEETTEEEEEETTEECCCEECCSSCCCCCCCSEEEESSCCTTCCCC--SSCSCCSBCCEEEEEEEETT
T ss_pred eecCCCcEEEEEEEeCCEEEEEEcCccccceecCCCcceecCCCCeEEeccCcccccc--cccccCCCceEEeEEEEECC
Confidence 9999999999999999999999999885555555555667777899999999753221 11124578999999999999
Q ss_pred EEcCCCCC--CCCcccCCCCCccceEEecCCeeEEee-ecccccceEEEEEEEEeCCCCeEEEEEcC-CCCeEEEEEECC
Q psy12396 164 KLVQDKHT--SSGVIPCSDKTESGVFFYNSGGYVKGV-EQFRVGREMELKMDVKPRNISGLLLSVHS-KKDYFILQMIDG 239 (348)
Q Consensus 164 ~~~~~~~~--~~g~~~C~~~~~~~~~f~~~~s~~~~~-~~~~~~~~~~i~~~frT~~~~Glll~~~~-~~~~l~l~l~~G 239 (348)
+.+++... ..++..|....+.+.+|. +.+|+.+. ..+......+|+|.|||++++|+|||..+ ..+|++|+|.+|
T Consensus 177 ~~l~l~~~~~~~~~~~C~~~~~~g~~F~-g~sy~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~~d~l~l~L~~G 255 (383)
T 2jd4_A 177 QQLDKDRPLSASAVDRCYVVAQEGTFFE-GSGYAALVKEGYKVRLDLQITLEFRTTSKNGVLLGISSAKVDAIGLEIVDG 255 (383)
T ss_dssp EECCTTSCSEEESCBCCBSSEESSEEEE-EEEEEEEEEEEECCBSCEEEEEEEEESCSCEEEEEEECSSSCEEEEEEETT
T ss_pred EEeccCCccccCccccccCcCccCceEC-CCeEEEEecCccccCCceEEEEEEEeCCCCEEEEEecCCCCcEEEEEEECC
Confidence 99876432 235678988888899996 57999984 44555567899999999999999999865 479999999999
Q ss_pred EEEEEEECCCcceEEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCC
Q psy12396 240 SVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSL 319 (348)
Q Consensus 240 ~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~ 319 (348)
+|++.++.+.+...+.+...+...+|||+||+|++.|.++.++|.||+.. ............++....+||||.|...
T Consensus 256 ~l~~~~~~g~g~~~~~~~~~~~~~l~DG~WH~V~l~~~~~~~~L~VD~~~-~~~~~~~~~~~~l~~~~~lylGG~p~~~- 333 (383)
T 2jd4_A 256 KVLFHVNNGAGRITATYQPRAARALCDGKWHTLQAHKSKHRIVLTVDGNS-VRAESPHTHSTSADTNDPIYVGGYPAHI- 333 (383)
T ss_dssp EEEEEEESSSCEEEEEECCSSTTGGGSSSCEEEEEEEETTEEEEEETTEE-EEEC----CCCCBCCCEEEEESCCCTTS-
T ss_pred EEEEEEECCCCcEEEEEecCCCccccCCCcEEEEEEEcCCEEEEEECCee-cccccCCCCcccccCCCCEEEecccccc-
Confidence 99999999887665533222356799999999999999999999999987 3332222233456777789999999874
Q ss_pred CCCCCCCccccceeeeeecCceeecc
Q psy12396 320 SSKKSGPRTKRRSVFLINANCKAVHP 345 (348)
Q Consensus 320 ~~~~~~~~~~~~F~GCi~~~~~~~~~ 345 (348)
.........+|+|||+++..+.+|
T Consensus 334 --~~~~~~~~~~F~GCi~~v~in~~~ 357 (383)
T 2jd4_A 334 --KQNSLSSRASFRGCVRNLRLSRGS 357 (383)
T ss_dssp --CCTTCSCCCBCEEEEEEEEEC---
T ss_pred --ccCCccccCCCceEccEEEECCCC
Confidence 334456678999999999998765
No 2
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=100.00 E-value=1.8e-54 Score=406.62 Aligned_cols=330 Identities=29% Similarity=0.486 Sum_probs=268.4
Q ss_pred eeEeCCCCeeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeecCce
Q psy12396 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDK 83 (348)
Q Consensus 4 ~~~F~g~~~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~~~ 83 (348)
..+|+++++||+.|+..+...+...+|+|+|||.+ ++|+|||.++....||++|+|.+|+|++.++.|++ ...+.++.
T Consensus 35 a~~Fg~~~~s~~~~~~~~~~~~~~~~is~~frT~~-~~GlLly~~~~~~~dfi~l~L~~G~l~~~~~~g~g-~~~~~~~~ 112 (394)
T 1dyk_A 35 SKQFGLSRNSHIAIAFDDTKVKNRLTIELEVRTEA-ESGLLFYMARINHADFATVQLRNGFPYFSYDLGSG-DTSTMIPT 112 (394)
T ss_dssp CEECCSSTTCEEEEECCGGGGSSEEEEEEEEEECC-SCEEEEEEECTTSSSEEEEEEETTEEEEEEESSSC-EEEEECCS
T ss_pred ceecCCCCCcEEEEEcCccccccceEEEEEEEeCC-CCeEEEEcCCCCCCceEEEEEECCEEEEEEECCCC-ceEEEccc
Confidence 57899999999999764444567899999999999 99999999875567999999999999999999998 67778888
Q ss_pred eecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeeeceEECC
Q psy12396 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNN 163 (348)
Q Consensus 84 ~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in~ 163 (348)
.++||+||+|++.|..+.+.|.||++...... ++....+++...+||||+|...... .......+|.|||+++.+|+
T Consensus 113 ~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~-~g~~~~l~~~~~l~vGG~p~~~~~~--~~~~~~~~F~GCi~~l~in~ 189 (394)
T 1dyk_A 113 KINDGQWHKIKIVRVKQEGILYVDDASSQTIS-PKKADILDVVGILYVGGLPINYTTR--RIGPVTYSLDGCVRNLHMEQ 189 (394)
T ss_dssp CCCSSSCEEEEEEEETTEEEEEETTEEEEEEC-STTCCCCCCCSEEEESSCCTTCCCC--SSCSCCSBCSEEEEEEEESS
T ss_pred ccCCCCEEEEEEEEeCCEEEEEEcCcccceec-CCCCceecCCCCEEEcccCCccccc--ccccCCCCccEeeeEEEECC
Confidence 99999999999999999999999998854333 5555667777899999999764321 11123568999999999999
Q ss_pred EEcCCCCC--CCCcccCCCCCccceEEecCCeeEEeeecccccceEEEEEEEEeCCCCeEEEEEcC-CCCeEEEEEECCE
Q psy12396 164 KLVQDKHT--SSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHS-KKDYFILQMIDGS 240 (348)
Q Consensus 164 ~~~~~~~~--~~g~~~C~~~~~~~~~f~~~~s~~~~~~~~~~~~~~~i~~~frT~~~~Glll~~~~-~~~~l~l~l~~G~ 240 (348)
+.+++... ..++.+|....+.+.+|. +++|+.+...+......+|+|.|||++++|+|||..+ ..+|++|+|.+|+
T Consensus 190 ~~~~l~~~~~~~~~~~C~~~~~~g~~F~-g~gy~~~~~~~~~~~~~~is~~frT~~~~GlLl~~~~~~~~~l~l~L~~G~ 268 (394)
T 1dyk_A 190 APVDLDQPTSSFHVGTCFANAESGTYFD-GTGFAKAVGGFKVGLDLLVEFEFRTTRPTGVLLGVSSQKMDGMGIEMIDEK 268 (394)
T ss_dssp SCCCTTSCSEEESCBCCBSSEEESEEEE-EEEEEECCSSBCCBSEEEEEEEEEESCSCEEEEEEECSSSCEEEEEEETTE
T ss_pred EEecCCCccccCcCCCCCCCCccCceeC-CCceeEEcCCcccCCceEEEEEEEeCCCCEEEEEecCCCCCEEEEEEECCE
Confidence 98876532 345679998888999996 5789887655666667999999999999999999854 5799999999999
Q ss_pred EEEEEECCCcceEEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCC
Q psy12396 241 VKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLS 320 (348)
Q Consensus 241 l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~ 320 (348)
|++.++.+.+...+.++..+...+|||+||+|++.+.++.++|.||+.. ............++....+||||.|...
T Consensus 269 l~~~~~~g~~~~~~~~~~~~~~~l~DG~WH~V~v~~~~~~~~L~VD~~~-~~~~~~~~~~~~l~~~~~lylGG~p~~~-- 345 (394)
T 1dyk_A 269 LMFHVDNGAGRFTAIYDAEIPGHMCNGQWHKVTAKKIKNRLELVVDGNQ-VDAQSPNSASTSADTNDPVFVGGFPGGL-- 345 (394)
T ss_dssp EEEEEESSSCCEEEEECCCSTTSTTSSSCEEEEEEEETTEEEEEETTEE-EEEECCCTTCCCBCCCBCCEESCCCTTC--
T ss_pred EEEEEECCCCcEEEEEecCCCccccCCceEEEEEEEeCCEEEEEECCcc-cccccCCCcceecccCCCEEEcCCCccc--
Confidence 9999999987665543322467899999999999999999999999977 3322222234456677789999999864
Q ss_pred CCCCCCccccceeeeeecCceee
Q psy12396 321 SKKSGPRTKRRSVFLINANCKAV 343 (348)
Q Consensus 321 ~~~~~~~~~~~F~GCi~~~~~~~ 343 (348)
.........+|+|||+++..+.
T Consensus 346 -~~~~~~~~~~F~GCi~~v~in~ 367 (394)
T 1dyk_A 346 -NQFGLTTNIRFRGCIRSLKLTK 367 (394)
T ss_dssp -CCTTCSCCCCCEEEEEEEEEEC
T ss_pred -cccccccCCCCceeeeEEEECC
Confidence 3344456789999999999875
No 3
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=100.00 E-value=1.1e-48 Score=370.35 Aligned_cols=323 Identities=15% Similarity=0.227 Sum_probs=233.5
Q ss_pred eeeEeCCCCeeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeecCc
Q psy12396 3 YYVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD 82 (348)
Q Consensus 3 ~~~~F~g~~~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~~ 82 (348)
|+++|+|...+++.|+.. .....+|+|+|||.+ ++|+|||.++....||++|+|.+|+|++.++.|++ ...+.++
T Consensus 41 ~~~~F~g~~~~~~~f~~~---~~~~~~is~~FrT~~-~~GlLly~~~~~~~df~~l~L~~G~l~~~~~~g~~-~~~~~~~ 115 (422)
T 1h30_A 41 LGRMFSGTPVIRLRFKRL---QPTRLVAEFDFRTFD-PEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGV-GRVTSSG 115 (422)
T ss_dssp CCC-----CCEEEECCBS---SCCCCEEEEEEEECC-SSEEEEEEESCTTSEEEEEEEETTEEEEEEEETTE-EEEEEEE
T ss_pred eeeEECCCceEEEEccCC---CCCceEEEEEEEeCC-CCeEEEEECCCCCCcEEEEEEECCEEEEEEECCCC-cEEEecC
Confidence 567899964444444432 247889999999999 99999999986567999999999999999999987 5666778
Q ss_pred eeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCcccc---ccCCeEEeccCCCCcceeccCccccccceeeeece
Q psy12396 83 KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLN---IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNL 159 (348)
Q Consensus 83 ~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~---~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l 159 (348)
..+|||+||+|++.|.++.+.|.||++.......++....++ ....+||||+|..... .......+|.|||+++
T Consensus 116 ~~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~---~~~~~~~~F~GCi~~v 192 (422)
T 1h30_A 116 PVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKD---LVQPINPRLDGCMRSW 192 (422)
T ss_dssp EECCSSCCEEEEEEECSSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGG---SSSCCCCCCCEEEEEE
T ss_pred ceecCCCCEEEEEEEcCCEEEEEECCeeeEEeecCCcccccccccccceEEEecCcccccc---cccccCCCCeEEEEEe
Confidence 899999999999999999999999998855555566555565 5678999999986532 1112457899999999
Q ss_pred EECCEEc-CCCC--CCCCcccCCCCCccceEEecCCeeEEeeeccc---------ccceEEEEEEEEeCCCCeEEEEEcC
Q psy12396 160 KSNNKLV-QDKH--TSSGVIPCSDKTESGVFFYNSGGYVKGVEQFR---------VGREMELKMDVKPRNISGLLLSVHS 227 (348)
Q Consensus 160 ~in~~~~-~~~~--~~~g~~~C~~~~~~~~~f~~~~s~~~~~~~~~---------~~~~~~i~~~frT~~~~Glll~~~~ 227 (348)
.+|+... ++.. ...+..+|....+.+.+|. +.+|+.+...+. .....+|+|.|||++++|+|||..+
T Consensus 193 ~i~~~~~~~l~~~~~~~~~~~C~~~~~~g~~F~-g~s~~~~~~~~~~lp~~~~~~~~~~~~is~~fRT~~~~GlLl~~~~ 271 (422)
T 1h30_A 193 NWLNGEDTTIQETVKVNTRMQCFSVTERGSFYP-GSGFAFYSLDYMRTPLDVGTESTWEVEVVAHIRPAADTGVLFALWA 271 (422)
T ss_dssp EEC---------CCCCCGGGSEESSCBSSEEEC-SSCCEEECCCCBC--------CCBCEEEEEEEEESSSCEEEEEEEE
T ss_pred EECCccccchhhhhhcccCCCCCCcCCCCceEC-CCeEEEEecCccccccccccccccceEEEEEEecCCCCEEEEEecC
Confidence 9965533 4322 2346789999989999995 678998864332 1246899999999999999999863
Q ss_pred C---CCeEEEEEECCEE-------EEEEECCCcceEEEEcCCCCeeecCCcEEEE--EEEEeCCEEEEEEcCCCcccccC
Q psy12396 228 K---KDYFILQMIDGSV-------KATVDNGKGPISAIYTPSDPYFFCDGQWHTI--VAIKTKNVISVAVDSMTTDKPGL 295 (348)
Q Consensus 228 ~---~~~l~l~l~~G~l-------~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v--~v~~~~~~~~l~vD~~~~~~~~~ 295 (348)
+ .+|++|+|.+|++ ++.+..+++.. + . ....+|||+||+| ++.++++. |.||+.. .....
T Consensus 272 ~~~~~d~l~l~L~~G~le~~~~~~~l~~~~~~g~~-~--~--~~~~l~DG~WH~V~~~l~~~~~~--L~vD~~~-~~~~~ 343 (422)
T 1h30_A 272 PDLRAVPLSVALVDYHSTKKLKKQLVVLAVEHTAL-A--L--MEIKVCDGQEHVVTVSLRDGEAT--LEVDGTR-GQSEV 343 (422)
T ss_dssp GGGTEEEEEEEEESCC-----CCCEEEEEETTEEE-E--E--EECCTTSSCCEEEEEEEETTEEE--EEETTEE-CEESS
T ss_pred CCcCCCcEEEEEEcCccccccccceEEEEeCCeeE-E--E--eeecccCCCEeEeEEEEEEeccE--EEEeCCc-cceee
Confidence 2 6899999999987 56677676652 2 1 2478999999999 66666554 8899866 22211
Q ss_pred CC----CCC----cccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeeccCC
Q psy12396 296 GP----PGS----SETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 296 ~~----~~~----~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~~ 347 (348)
.+ ... ..++....+||||.|... ........+|+||| ++.++.+|++
T Consensus 344 ~~~~~~~~~~~~~~~l~~~~~lyiGG~p~~~----~~~~~~~~~F~GCi-~l~ing~~ld 398 (422)
T 1h30_A 344 SAAQLQERLAVLERHLRSPVLTFAGGLPDVP----VTSAPVTAFYRGCM-TLEVNRRLLD 398 (422)
T ss_dssp CHHHHHHHHHHHHHHHTSCCEEEESCCCSCC----TTSSSCCSBCCEEE-EEEETTEECC
T ss_pred chhhcccchhhhhhhhccCCceEEcccCCCC----ccccCccCCccccE-EEEECCEEec
Confidence 10 000 114567789999999852 23345567899999 6888777653
No 4
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=100.00 E-value=8.1e-47 Score=356.46 Aligned_cols=318 Identities=22% Similarity=0.337 Sum_probs=237.1
Q ss_pred eeEeCCCCeeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeec--C
Q psy12396 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSS--G 81 (348)
Q Consensus 4 ~~~F~g~~~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~--~ 81 (348)
.++|.+. +||++||.++. ....+|+|+|||.+ ++|+|||.++ ...||++|+|.+|+|++.++.|++ ...+. +
T Consensus 7 ~v~F~~~-~Syl~~p~~~~--~~~~~is~~frT~~-~~GlLly~~~-~~~dfi~l~L~~G~l~~~~~~G~g-~~~~~~~s 80 (410)
T 3asi_A 7 PVTFKTK-SSYVALATLQA--YTSMHLFFQFKTTS-LDGLILYNSG-DGNDFIVVELVKGYLHYVFDLGNG-ANLIKGSS 80 (410)
T ss_dssp CEEECST-TCEEEESCCCC--SSCEEEEEEEECSC-SCEEEEEEEB-STTCEEEEEEETTEEEEEEESSSC-EEEEECCC
T ss_pred ccEeCCC-CeeEEeCCCCC--CceEEEEEEEEeCC-CCeEEEEeCC-CCCCEEEEEEECCEEEEEEECCCC-cEEEEecc
Confidence 4689754 79999998653 46889999999999 9999999876 357999999999999999999988 55554 6
Q ss_pred ceeecCCCcEEEEEEEeCc-EEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeeeceE
Q psy12396 82 DKLILDGEWHTVEFSRQQL-SGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLK 160 (348)
Q Consensus 82 ~~~~~dg~Wh~v~v~~~~~-~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~ 160 (348)
+..++||+||+|++.|..+ .+.|.||+.... ...++ ...++....+||||+|......++.......+|.|||+++.
T Consensus 81 ~~~vnDg~WH~V~v~r~~~~~~~l~VD~~~~~-~~~~~-~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~l~ 158 (410)
T 3asi_A 81 NKPLNDNQWHNVMISRDTSNLHTVKIDTKITT-QITAG-ARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVD 158 (410)
T ss_dssp SSCSCSSSCEEEEEEECTTCEEEEEETTEEEE-EECTT-CCCCCBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEEE
T ss_pred CcEeCCCCeEEEEEEEcCCceEEEEECCEece-eccCC-ccceecCCceEECccccchhhhhhhhcccccCchhheehee
Confidence 7899999999999999986 478999997633 22232 34577777999999997533222222234577999999999
Q ss_pred ECCEEcCCCCCC----CCc-------------ccCCCC-----------------------Cc---cceEEecCCeeEEe
Q psy12396 161 SNNKLVQDKHTS----SGV-------------IPCSDK-----------------------TE---SGVFFYNSGGYVKG 197 (348)
Q Consensus 161 in~~~~~~~~~~----~g~-------------~~C~~~-----------------------~~---~~~~f~~~~s~~~~ 197 (348)
+|++.+++.... .++ .||.+. |+ ....|..+++|+.|
T Consensus 159 ing~~~dl~~~~~~~~~~v~~gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~~~~~~f~~~~~~~~~ 238 (410)
T 3asi_A 159 LNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITY 238 (410)
T ss_dssp SSSCCCCTTTTCSEEESSEEESCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEECCEEEEEEEEEEEEE
T ss_pred eCCcccCchhhhhccCCccCCCCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCCcccccccCCCceEEE
Confidence 999977653211 111 233320 00 01234345577777
Q ss_pred eeccc---ccceEEEEEEEEeCCCCeEEEEEcC---CCCeEEEEEECCEEEEEEECCCcceEEEEcCCCCeeecCCcEEE
Q psy12396 198 VEQFR---VGREMELKMDVKPRNISGLLLSVHS---KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHT 271 (348)
Q Consensus 198 ~~~~~---~~~~~~i~~~frT~~~~Glll~~~~---~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~ 271 (348)
..+.. .....+++|.|||++++|+|||..+ ..+|++|+|.+|+|++.++.+++...+ . .....++||+||+
T Consensus 239 ~~~~~~~~~~~~~~i~l~frT~~~~GlLl~~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~--~-~~~~~l~DG~wH~ 315 (410)
T 3asi_A 239 KWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAI--E-ESNAIINDGKYHV 315 (410)
T ss_dssp ECCTTCCCCBSEEEEEEEEECCCSEEEEEEEEECTTCCCEEEEEEETTEEEEEEESSSSCEEE--E-CCSCCCCSSSCEE
T ss_pred ecCCCCCccceeeEEEEEEEeCCCCEEEEEEecCCCCCceEEEEEeCCEEEEEEECCCCceEE--e-cCccCcCCCCeEE
Confidence 53321 1234689999999999999999763 369999999999999999999876555 2 2357899999999
Q ss_pred EEEEEeCCEEEEEEcCCCcccccCCCC-CCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeecc
Q psy12396 272 IVAIKTKNVISVAVDSMTTDKPGLGPP-GSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHP 345 (348)
Q Consensus 272 v~v~~~~~~~~l~vD~~~~~~~~~~~~-~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~ 345 (348)
|++.|+++.++|+||+.. ......+. ....++....+||||.|.. .+|.|||+++..+..+
T Consensus 316 V~v~r~~~~~~L~VD~~~-~~~~~~~g~~~~~~~~~~~lylGG~p~~------------~~F~GCi~~v~ing~~ 377 (410)
T 3asi_A 316 VRFTRSGGNATLQVDSWP-VIERYPAGRQLTIFNSQATIIIGGKEQG------------QPFQGQLSGLYYNGLK 377 (410)
T ss_dssp EEEEEETTEEEEEETTSC-CEEECCSSCCCCCBCCEEEEEESSTTTT------------CCCCEEEEEEEETTBC
T ss_pred EEEEEECCEEEEEECCcc-eecccCCCccceeeeccceEEECCcccC------------CCCEEEEEEEEECCHH
Confidence 999999999999999987 33322222 1223556678999999864 5999999999887665
No 5
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=100.00 E-value=2.4e-46 Score=369.98 Aligned_cols=327 Identities=19% Similarity=0.298 Sum_probs=245.3
Q ss_pred eEeCCCCeeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeecCcee
Q psy12396 5 VIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84 (348)
Q Consensus 5 ~~F~g~~~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~~~~ 84 (348)
++|.| +||+.++..........+|+|+|||.+ ++|+|||.+.....+|++|+|++|+|++.++.|++ ...+.++..
T Consensus 206 ~~F~g--~sy~~~~~~~~~~~~~~~isl~FrT~~-~~GlLl~~~~~~~~d~l~L~L~~G~l~~~~~~g~~-~~~l~s~~~ 281 (608)
T 2wjs_A 206 IQFDG--EGYALVSRPIRWYPNISTVMFKFRTFS-SSALLMYLATRDLKDFMSVELSDGHVKVSYDLGSG-MTSVVSNQN 281 (608)
T ss_dssp EEEEE--EEEEEEECCTTCBTTEEEEEEEEEESC-SEEEEEEEECTTSSSEEEEEEETTEEEEEEECSSC-EEEEEEEEE
T ss_pred eEECC--CcceEEeccccCCCcceEEEEEEEeCC-CCeEEEEecCCCCCceEEEEEECCEEEEEEECCCC-cEEEEcCcc
Confidence 78888 699999742222346789999999999 99999999875567999999999999999999988 567777889
Q ss_pred ecCCCcEEEEEEEeCcEEEEEECCee-----eeeeeecCCCcccc--ccCCeEEeccCCCCcceeccCccccccceeeee
Q psy12396 85 ILDGEWHTVEFSRQQLSGKLKIDGQV-----VAEGESKGSSKTLN--IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR 157 (348)
Q Consensus 85 ~~dg~Wh~v~v~~~~~~~~l~vd~~~-----~~~~~~~~~~~~l~--~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~ 157 (348)
++||+||+|.+.+..+.+.|.||++. ......++....++ ....+||||+|..... + ......+|.|||+
T Consensus 282 ~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~g~~~~l~~~~~~~lylGG~p~~~~~--~-~~~~~~~F~GCi~ 358 (608)
T 2wjs_A 282 HNDGKWKAFTLSRIQKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNL--R-PEVNVKKYSGCLK 358 (608)
T ss_dssp CCSSSCEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSCC--C-TTCCCCCCEEEEE
T ss_pred ccCCceEEEEEEEecceEEEEEeccccccccccccccCCccccccccCCCceEEeccCccccc--C-cccccCCceEEee
Confidence 99999999999999999999999732 12233444444455 3568999999986431 1 1123578999999
Q ss_pred ceEECCEEcCCCCC--CCCc-ccCCCCCccceEEecCCeeEEeeecccccceEEEEEEEEeCCCCeEEEEEcC-CCCeEE
Q psy12396 158 NLKSNNKLVQDKHT--SSGV-IPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHS-KKDYFI 233 (348)
Q Consensus 158 ~l~in~~~~~~~~~--~~g~-~~C~~~~~~~~~f~~~~s~~~~~~~~~~~~~~~i~~~frT~~~~Glll~~~~-~~~~l~ 233 (348)
++.+|++.+++... ..++ .+|......+.+|. +.+|+.+.. +......+|+|.|||++++|+|||..+ +.+|++
T Consensus 359 ~v~in~~~~~l~~~~~~~~v~~gC~~~~~~~~~F~-~~g~~~~~~-~~~~~~~~i~~~FRT~~~~GlLl~~~~~~~~~l~ 436 (608)
T 2wjs_A 359 DIEISRTPYNILSSPDYVGVTKGCSLENVYTVSFP-KPGFVELAA-VSIDVGTEINLSFSTRNESGIILLGSGGGQAYYA 436 (608)
T ss_dssp EEEETTEEECGGGCSSCEEEEESCCCCCTTEEECS-SSCEEEECC-CCBCTTEEEEEEEEESCSSEEEEEEC---CCEEE
T ss_pred eEEECCEecCccccccccccccCCCcccccccccC-CCCeEEecC-ccCCCCcEEEEEEEeCCCCeEEEEEcCCCCceEE
Confidence 99999999876542 2344 57998888888996 568998852 333456889999999999999999876 589999
Q ss_pred EEEECCEEEEEEECCCcce-EEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEc
Q psy12396 234 LQMIDGSVKATVDNGKGPI-SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG 312 (348)
Q Consensus 234 l~l~~G~l~~~~~~~~~~~-~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iG 312 (348)
|+|.+|+|++.++.+++.. .+.+. .+...+|||+||+|++.+.++.++|.||+.. ..... ......++ ...+|||
T Consensus 437 l~L~~G~l~~~~~~g~~~~~~~~l~-~~~~~l~DG~WH~V~v~~~~~~~~L~VD~~~-~~~~~-~~~~~~l~-~~~lylG 512 (608)
T 2wjs_A 437 IFLNKGRLEVHLSSGTRTMRKIVIK-PEPNRFHDGREHSVHVERTRGIFTVQIDEDR-RHMQN-LTEEQPIE-VKKLFVG 512 (608)
T ss_dssp EEEETTEEEEEEEC----CEEEEEC-CCSSCSSSSSCEEEEEEECSSEEEEEESSSC-CEEEE-CCCCSCBC-CSCEEES
T ss_pred EEEECCEEEEEEECCCCceeEEEEe-CCCcccCCCCeEEEEEEEeCCEEEEEECCcc-ccccc-CCcccccc-cCceEEe
Confidence 9999999999999987542 12111 2467899999999999999999999999987 32211 11222233 3579999
Q ss_pred ccCCCCCCCCCCCCccccceeeeeecCceeeccCC
Q psy12396 313 GHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 313 G~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~~ 347 (348)
|.|... .........+|+|||+++..+.++++
T Consensus 513 G~p~~~---~~~~~~~~~~F~GCi~~v~in~~~ld 544 (608)
T 2wjs_A 513 GAPPEF---QPSPLRNIPAFQGCVWNLVINSIPMD 544 (608)
T ss_dssp CCCC-----------CCCCCCEEEEEEEETTEECC
T ss_pred CCCccc---cccccccCCCCcEEEEEEEECCEEcc
Confidence 999874 22224556899999999999888764
No 6
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=100.00 E-value=6.4e-47 Score=374.14 Aligned_cols=328 Identities=19% Similarity=0.305 Sum_probs=241.8
Q ss_pred eeEeCCCCeeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeecC-c
Q psy12396 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG-D 82 (348)
Q Consensus 4 ~~~F~g~~~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~-~ 82 (348)
..+|+| ++|+.|++ +.......+|+|+|||.+ +||+|||.++....||++|+|++|+|++.+++|++ ...+.. +
T Consensus 12 ~~~F~g--~~~~~y~p-~~~~~~~~~isl~FrT~~-~~glLly~~~~~~~dfl~l~L~~G~l~~~~~~G~g-~~~l~~~~ 86 (608)
T 2wjs_A 12 SVSSGG--DCVRTYRP-EIKKGSYNNIVVHVKTAV-ADNLLFYLGSAKFIDFLAIEMRKGKVSFLWDVGSG-VGRVEYPD 86 (608)
T ss_dssp BCC------CEEEECC-CCSCTTEEEEEEEEEESC-SCEEEEEEECSSCSCEEEEEEETTEEEEEEESSSC-EEEEECCS
T ss_pred EEEcCC--CeEEEecC-CCCCcccceEEEEEecCC-CceEEEEeCCCCCCcEEEEEEECCEEEEEEECCCC-ceEEeeCC
Confidence 357888 69999986 445678899999999999 99999999986568999999999999999999998 666654 5
Q ss_pred eeecCCCcEEEEEEEeCcEEEEEECCeee---------eeeeecCCCcccccc--CCeEEeccCCCCcceeccCcccccc
Q psy12396 83 KLILDGEWHTVEFSRQQLSGKLKIDGQVV---------AEGESKGSSKTLNIF--GPFYLGGVPLNTSTLVRGNLGLNDT 151 (348)
Q Consensus 83 ~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~---------~~~~~~~~~~~l~~~--~~~~iGG~~~~~~~~~~~~~~~~~~ 151 (348)
..++||+||+|.+.|..+.+.|+||++.. .+..+++....++++ ..+||||+|..... +.. ....+
T Consensus 87 ~~~~dg~WH~V~v~r~~~~~~l~Vd~~~~~~~~~~~~~~~~~~~g~~~~L~l~~~~~l~vGG~p~~~~~--~~~-~~~~~ 163 (608)
T 2wjs_A 87 LTIDDSYWYRIEASRTGRNGSISVRALDGPKASMVPSTYHSVSPPGYTILDVDANAMLFVGGLTGKIKK--ADA-VRVIT 163 (608)
T ss_dssp CCCTTSCCEEEEEEEETTEEEEEEEESSSTTTTSCCCCEEEECCSSCCSCCCCSSCEEEESSCCTTSCC--CTT-CCCCC
T ss_pred ccccCCceEEEEEEEeCCEEEEEEecccCccccccccccccccCCcceeeccCCCCcEEeCCcCccccC--Ccc-cccCC
Confidence 78999999999999999999999998652 123445555556654 56999999975332 111 11368
Q ss_pred ceeeeeceEECCEEcCCCCCC--CCc-ccCCCC--Ccc---ceEEecCCeeEEeeeccc-ccceEEEEEEEEeCCCCeEE
Q psy12396 152 FVGCLRNLKSNNKLVQDKHTS--SGV-IPCSDK--TES---GVFFYNSGGYVKGVEQFR-VGREMELKMDVKPRNISGLL 222 (348)
Q Consensus 152 F~GCi~~l~in~~~~~~~~~~--~g~-~~C~~~--~~~---~~~f~~~~s~~~~~~~~~-~~~~~~i~~~frT~~~~Gll 222 (348)
|.|||+++.+|++.+++.... .++ .+|... ++. ..+|. +++|+.+..... .....+|+|.|||++++|+|
T Consensus 164 F~GCi~~l~in~~~i~l~~~~~~~g~~~gC~~~p~~~~~~~~~~F~-g~sy~~~~~~~~~~~~~~~isl~FrT~~~~GlL 242 (608)
T 2wjs_A 164 FTGCMGETYFDNKPIGLWNFREKEGDCKGCTVSPQVEDSEGTIQFD-GEGYALVSRPIRWYPNISTVMFKFRTFSSSALL 242 (608)
T ss_dssp CCEEECCCEESSSBC----CCEEESCCCCC--------CCCCEEEE-EEEEEEEECCTTCBTTEEEEEEEEEESCSEEEE
T ss_pred ccEEEEEEEECCEEccccccccccCCCCCCCCCcccccCCcceEEC-CCcceEEeccccCCCcceEEEEEEEeCCCCeEE
Confidence 999999999999988765322 222 356532 222 47785 578998864322 24568999999999999999
Q ss_pred EEEcC--CCCeEEEEEECCEEEEEEECCCcceEEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcc----cccCC
Q psy12396 223 LSVHS--KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD----KPGLG 296 (348)
Q Consensus 223 l~~~~--~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~----~~~~~ 296 (348)
||... ..+|++|+|.+|+|+++++.+++...+ .+...++||+||+|++.|.++.++|.||+.... .....
T Consensus 243 l~~~~~~~~d~l~L~L~~G~l~~~~~~g~~~~~l----~s~~~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~ 318 (608)
T 2wjs_A 243 MYLATRDLKDFMSVELSDGHVKVSYDLGSGMTSV----VSNQNHNDGKWKAFTLSRIQKQANISIVDIDSNQEENVATSS 318 (608)
T ss_dssp EEEECTTSSSEEEEEEETTEEEEEEECSSCEEEE----EEEEECCSSSCEEEEEEEETTEEEEEEEETTTCCEEEEEEEC
T ss_pred EEecCCCCCceEEEEEECCEEEEEEECCCCcEEE----EcCccccCCceEEEEEEEecceEEEEEecccccccccccccc
Confidence 99853 479999999999999999999877554 346789999999999999999999999985411 01111
Q ss_pred CCCCcccC--CCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeeccCC
Q psy12396 297 PPGSSETD--TNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 297 ~~~~~~~~--~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~~ 347 (348)
+.....++ ....+||||.|... .........+|.|||+++..+.++++
T Consensus 319 ~g~~~~l~~~~~~~lylGG~p~~~---~~~~~~~~~~F~GCi~~v~in~~~~~ 368 (608)
T 2wjs_A 319 SGNNFGLDLKADDKIYFGGLPTLR---NLRPEVNVKKYSGCLKDIEISRTPYN 368 (608)
T ss_dssp CSSCCCCCCCTTCEEEESCCCCCS---CCCTTCCCCCCEEEEEEEEETTEEEC
T ss_pred CCccccccccCCCceEEeccCccc---ccCcccccCCceEEeeeEEECCEecC
Confidence 22233344 46789999999864 22223346799999999988877653
No 7
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=100.00 E-value=1.3e-43 Score=374.52 Aligned_cols=332 Identities=20% Similarity=0.333 Sum_probs=254.1
Q ss_pred ceeeEeCCCCeeeEEecCCcC-cccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceee-
Q psy12396 2 SYYVIAGTSKSSRIEYPTITG-RFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS- 79 (348)
Q Consensus 2 ~~~~~F~g~~~sy~~~~~~~~-~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~- 79 (348)
+++++|.| .+|+.|+.... .......|+|+|||.+ ++|+|||.+. ..||++|+|++|+|.+.+++|++....+
T Consensus 231 ~~~~~F~G--~~~~~y~~~~~~~~~~~~~i~l~FrT~~-~~GlLl~~g~--~~d~l~L~L~~G~l~l~~~lG~g~~~~~~ 305 (1245)
T 3qcw_A 231 EYIATFKG--SEYFCYDLSQNPIQSSSDEITLSFKTLQ-RNGLMLHTGK--SADYVNLALKNGAVSLVINLGSGAFEALV 305 (1245)
T ss_dssp CCEEEECS--SCEEEEECTTSCEEESEEEEEEEEECSC-SCEEEEEECS--SSEEEEEEEETTEEEEEEEESSCCEEEEE
T ss_pred cceeeeCC--cEEEEEccccCcccccccEEEEEEEeCC-CCceEEEecC--CCCEEEEEEECCEEEEEEEcCCCeEEEEE
Confidence 46789999 58999975332 2345689999999999 9999999965 6899999999999999999998832212
Q ss_pred -cCceeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeeec
Q psy12396 80 -SGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRN 158 (348)
Q Consensus 80 -~~~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~ 158 (348)
..+..++||+||+|.+.|..+.+.|+||+........++....++.+..+||||+|..... + ......+|.|||++
T Consensus 306 ~~~~~~l~Dg~WH~V~v~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~--~-~~~~~~~F~GCi~~ 382 (1245)
T 3qcw_A 306 EPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL--P-GSPVSNNFMGCLKE 382 (1245)
T ss_dssp CCCSSCSSSSSCEEEEEEEETTEEEEEESSSCCEEEECSSSCCCEEECSEEEESCCSSTTTS--T-TCCCCCCCCEEEEE
T ss_pred ccCCcccCCCCEEEEEEEEeCCEEEEEECCcceeeeecCCCcccccCCCCEEECCcCChhhc--c-CCccCCCceeEeee
Confidence 3467899999999999999999999999976445555665566776778999999975321 1 12245789999999
Q ss_pred eEECCEEcCCCC-----CC------CC--cccCCCC-CccceEEecCCeeEEeeecccccceEEEEEEEEeCCCCeEEEE
Q psy12396 159 LKSNNKLVQDKH-----TS------SG--VIPCSDK-TESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLS 224 (348)
Q Consensus 159 l~in~~~~~~~~-----~~------~g--~~~C~~~-~~~~~~f~~~~s~~~~~~~~~~~~~~~i~~~frT~~~~Glll~ 224 (348)
+.+|++.+++.. .. .+ ...|... ...++.|....+|+.++ .+.......|+|+|||.+++|+|||
T Consensus 383 l~~n~~~i~l~~~~~~~~~~~~~~~~g~~~~~C~~~~~~~~vsF~~~~syl~lp-~~~~~~~~~is~~FrT~~~~GlLly 461 (1245)
T 3qcw_A 383 VVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLP-KWNAKKTGSISFDFRTTEPNGLILF 461 (1245)
T ss_dssp EEEEESSCEECHHHHHHSCCTTEEEESSCCCCCSCCCCCCCEEECSTTCCEEEC-CCCCSSEEEEEEEEECCCSCEEEEE
T ss_pred eEECCccccccchhhhhcCCCccccCCceeecccCCCccccceeCCCCeEEEec-CCCccCceEEEEEEEeCCCCeEEEE
Confidence 999998765321 00 11 2468643 34567787778999885 4455567899999999999999999
Q ss_pred EcCC--------------CCeEEEEEECCEEEEEEECCCcceEEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCc
Q psy12396 225 VHSK--------------KDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTT 290 (348)
Q Consensus 225 ~~~~--------------~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~ 290 (348)
..++ .+|++|+|.+|+++++++.+++...+. .+...+|||+||+|.+.|+++.++|.||+..
T Consensus 462 ~~~~~~~~~~~~~~~~~~~df~~LeL~~G~l~l~~~~G~g~~~l~---~s~~~vnDG~WH~V~l~r~~~~~~L~VD~~~- 537 (1245)
T 3qcw_A 462 SHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIK---ALQKKVNDGEWYHVDFQRDGRSGTISVNTLR- 537 (1245)
T ss_dssp EECCCCSSCCSSCTTSCCCCEEEEEEETTEEEEEEESSSCEEEEE---SCSSCCCSSCCEEEEEEEETTEEEEEETTEE-
T ss_pred ecCccccccccccccccCCCEEEEEEeCCeEEEEEECCCCeEEEe---ecccEecCCCEEEEEEEEecCEEEEEEcccc-
Confidence 8532 489999999999999999998876652 2577899999999999999999999999975
Q ss_pred ccccCCCCCCcccCCCCceEEcccCCCCCCCCCCC----CccccceeeeeecCceeeccCC
Q psy12396 291 DKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSG----PRTKRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~----~~~~~~F~GCi~~~~~~~~~~~ 347 (348)
... ..+.....++....+||||+|........+. .....+|+||||++.++.+|++
T Consensus 538 ~~~-~~~~~~~~l~~~~~lylGG~p~~~~~~~~p~~~~~~~~~~gF~GCir~l~ing~~~d 597 (1245)
T 3qcw_A 538 TPY-TAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKD 597 (1245)
T ss_dssp EEE-ECSSSCCCCCCCSCEEESSCCSSCTTCCCCTTCHHHHTTCBCCEEEEEEEETTEEEC
T ss_pred ccc-ccCCCcceeccCCceEEcccccccccccccccccccccccCceEEEEEEEECCEEcC
Confidence 222 1233445577788999999997641111111 1235799999999999887754
No 8
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=100.00 E-value=7.6e-45 Score=383.84 Aligned_cols=332 Identities=20% Similarity=0.334 Sum_probs=121.2
Q ss_pred EeCCCCeeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeC-cEEEEEEEcCCCCceeecCcee
Q psy12396 6 IAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKD-GQIHYSFNCGSGPMALSSGDKL 84 (348)
Q Consensus 6 ~F~g~~~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~-G~l~~~~~~g~~~~~~~~~~~~ 84 (348)
.|+|+++||++|+.|.. ..+.+|+|+|||.+ ++|+|||.++....||++|+|++ |+|+++|+.+++....+.++..
T Consensus 2 ~f~g~~~~~~~~~~~~~--~~~~~ls~~frT~~-~~glllY~~~~~~~df~~l~l~~~G~~~~~~~~g~~~~~~~~~~~~ 78 (1245)
T 3qcw_A 2 EFPGAEGQWTRFPKWNA--CCESEMSFQLKTRS-ARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLTDTP 78 (1245)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCccceecccccc--CCCCEEEEEEEcCC-CCeEEEEecCCCCCCeEEEEEecCCeEEEEEECCCCCceEEecCce
Confidence 59999999999997664 47789999999999 99999999987677999999999 9999999998764466778999
Q ss_pred ecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCccee---ccC-ccccccceeeeeceE
Q psy12396 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLV---RGN-LGLNDTFVGCLRNLK 160 (348)
Q Consensus 85 ~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~---~~~-~~~~~~F~GCi~~l~ 160 (348)
++||+||+|+|.|..+.+.|.||+..............++....+||||+|....... ..+ .....+|.|||+++.
T Consensus 79 v~dg~Wh~v~v~r~~~~~~L~Vd~~~~~~~~~~~~~~~~~~~~~l~vGG~p~~~~~~~~~l~~~~v~~~~~F~Gci~~l~ 158 (1245)
T 3qcw_A 79 VNDGAWHNVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVR 158 (1245)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eCCCCcEEEEEEEecCeEEEEECCccceeeeecCCcccccccCceeeeeCChHHhcccccccCccccccCCcceEEEEEE
Confidence 9999999999999999999999994322222222333466667899999998754321 111 112368999999999
Q ss_pred ECCEEcCCCCC-----------CCCcccCC-----------CC-----------------------C-----ccceEEec
Q psy12396 161 SNNKLVQDKHT-----------SSGVIPCS-----------DK-----------------------T-----ESGVFFYN 190 (348)
Q Consensus 161 in~~~~~~~~~-----------~~g~~~C~-----------~~-----------------------~-----~~~~~f~~ 190 (348)
+|+..+.+... .++..||. +. | .....|.
T Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~pC~~~~~~~~~~C~ngg~C~~~~~~~~C~C~~~g~~G~~Ce~~~~~~~~~F~- 237 (1245)
T 3qcw_A 159 VQSSLALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGKEEYIATFK- 237 (1245)
T ss_dssp ------------------------------------------------------------------------CCEEEEC-
T ss_pred ECCcccccccccCcccccccccccCCCCcCCcccCCCCCCCCCCCCccCCCCceeECCCCCccCCccccCcccceeeeC-
Confidence 99986544221 01222333 10 0 0123463
Q ss_pred CCeeEEeeeccc--ccceEEEEEEEEeCCCCeEEEEEcCCCCeEEEEEECCEEEEEEECCCcceEEEEcCCCCeeecCCc
Q psy12396 191 SGGYVKGVEQFR--VGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQ 268 (348)
Q Consensus 191 ~~s~~~~~~~~~--~~~~~~i~~~frT~~~~Glll~~~~~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~ 268 (348)
|.+|+.|..... ......|+|.|||.+++|+|||.+++.+|++|+|.+|++.+.+++|++....... .....++||+
T Consensus 238 G~~~~~y~~~~~~~~~~~~~i~l~FrT~~~~GlLl~~g~~~d~l~L~L~~G~l~l~~~lG~g~~~~~~~-~~~~~l~Dg~ 316 (1245)
T 3qcw_A 238 GSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVE-PVNGKFNDNA 316 (1245)
T ss_dssp SSCEEEEECTTSCEEESEEEEEEEEECSCSCEEEEEECSSSEEEEEEEETTEEEEEEEESSCCEEEEEC-CCSSCSSSSS
T ss_pred CcEEEEEccccCcccccccEEEEEEEeCCCCceEEEecCCCCEEEEEEECCEEEEEEEcCCCeEEEEEc-cCCcccCCCC
Confidence 678988864322 2234789999999999999999977799999999999999999999887543222 3567899999
Q ss_pred EEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeeccC
Q psy12396 269 WHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPL 346 (348)
Q Consensus 269 wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~ 346 (348)
||+|.+.|.++.+.|.||+.. ......+.....++..+.+||||+|... ..+......+|.|||+++..+.+++
T Consensus 317 WH~V~v~r~~~~~~l~VD~~~-~~~~~~~~~~~~l~~~~~l~vGG~p~~~---~~~~~~~~~~F~GCi~~l~~n~~~i 390 (1245)
T 3qcw_A 317 WHDVKVTRNLRQVTISVDGIL-TTTGYTQEDYTMLGSDDFFYVGGSPSTA---DLPGSPVSNNFMGCLKEVVYKNNDV 390 (1245)
T ss_dssp CEEEEEEEETTEEEEEESSSC-CEEEECSSSCCCEEECSEEEESCCSSTT---TSTTCCCCCCCCEEEEEEEEEESSC
T ss_pred EEEEEEEEeCCEEEEEECCcc-eeeeecCCCcccccCCCCEEECCcCChh---hccCCccCCCceeEeeeeEECCccc
Confidence 999999999999999999976 3333333444556667789999999764 3344455679999999998887764
No 9
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=99.97 E-value=2.8e-29 Score=211.62 Aligned_cols=173 Identities=20% Similarity=0.398 Sum_probs=140.0
Q ss_pred eeeEeCCCCeeeEEecCCc-----------CcccceEEEEEEEEcCCCCCeEEEEEecC-CCCcEEEEEEeCcEEEEEEE
Q psy12396 3 YYVIAGTSKSSRIEYPTIT-----------GRFKNKFDFSIDIKTTSEQDGIIFYVADV-KHIDYVALYVKDGQIHYSFN 70 (348)
Q Consensus 3 ~~~~F~g~~~sy~~~~~~~-----------~~~~~~~~i~~~FrT~~~~~GlLl~~~~~-~~~~~l~l~L~~G~l~~~~~ 70 (348)
=.++|+| +||++|+... .......+|+|+|||.+ ++|+|||.++. ...||++|+|.+|+|++.++
T Consensus 3 ~~~~F~G--~sy~~y~~~~~~~~~~~~~~~~~~~~~~~isl~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~G~l~~~~~ 79 (191)
T 3v64_A 3 ETLAFDG--RTYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEA-TQGLVLWIGKAAERADYMALAIVDGHLQLSYD 79 (191)
T ss_dssp CEEEEES--SCCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSC-SSEEEEEESCCSTTCCEEEEEEETTEEEEEEE
T ss_pred ccceecC--ceeEEEccccccccccccccccccccceEEEEEEEeCC-CCeEEEEeCCCCCCCcEEEEEEECCEEEEEEE
Confidence 3678999 7999997521 12357899999999999 99999999873 35699999999999999999
Q ss_pred cCCCCceeecCceeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccc
Q psy12396 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLND 150 (348)
Q Consensus 71 ~g~~~~~~~~~~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~ 150 (348)
.|++ ...+.++..++||+||+|.+.+.++.+.|.||+........++....++....+||||.|....... .+.....
T Consensus 80 ~G~~-~~~l~s~~~v~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~-~~~~~~~ 157 (191)
T 3v64_A 80 LGSQ-PVVLRSTVKVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQA-LPKAYGT 157 (191)
T ss_dssp SSSC-CEEEEEEEECTTSSCEEEEEEEETTEEEEEETTSCCEEEECCTTCCCEEECSEEEESCCSSCCSSCC-SCGGGTS
T ss_pred CCCc-cEEEecCccccCCCCEEEEEEEeCCEEEEEECCeeeEeEECCCCcceeccCCceEEcccCccccccc-ccccccC
Confidence 9988 6677788899999999999999999999999997655566666666788888999999998543211 1112457
Q ss_pred cceeeeeceEECCEEcCCCCC---CCCcccCCC
Q psy12396 151 TFVGCLRNLKSNNKLVQDKHT---SSGVIPCSD 180 (348)
Q Consensus 151 ~F~GCi~~l~in~~~~~~~~~---~~g~~~C~~ 180 (348)
+|.|||+++.+|++.+++... ..++.+|+.
T Consensus 158 ~F~GCi~~l~in~~~l~l~~~~~~~~~~~gC~~ 190 (191)
T 3v64_A 158 GFVGCLRDVVVGHRQLHLLEDAVTKPELRPCPT 190 (191)
T ss_dssp BCEEEEEEEEETTEECCTTTTCSBCCCCCCCSC
T ss_pred CceEEeeEEEECCEEccchhHHhcCCCCCCCCC
Confidence 899999999999999987642 346788974
No 10
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=99.97 E-value=5.1e-29 Score=212.40 Aligned_cols=172 Identities=20% Similarity=0.386 Sum_probs=135.7
Q ss_pred eeEeCCCCeeeEEecCCc--------------CcccceEEEEEEEEcCCCCCeEEEEEecC-CCCcEEEEEEeCcEEEEE
Q psy12396 4 YVIAGTSKSSRIEYPTIT--------------GRFKNKFDFSIDIKTTSEQDGIIFYVADV-KHIDYVALYVKDGQIHYS 68 (348)
Q Consensus 4 ~~~F~g~~~sy~~~~~~~--------------~~~~~~~~i~~~FrT~~~~~GlLl~~~~~-~~~~~l~l~L~~G~l~~~ 68 (348)
..+|.| +||++|+... .......+|+|+|||.+ ++|+|||.++. ...||++|+|.+|+|++.
T Consensus 14 ~~~F~G--~sy~~~~~~~~~~~~~l~~~~~~~~~~~~~~~is~~frT~~-~~GlLl~~g~~~~~~dfl~l~L~~G~l~~~ 90 (204)
T 1pz7_A 14 AIAFDG--RTYMEYHNAVTKSPDALDYPAEPSEKALQSNHFELSIKTEA-TQGLILWSGKGLERSDYIALAIVDGFVQMM 90 (204)
T ss_dssp CEEEES--SCCEEEECCSCCC-------CCSSCEEESEEEEEEEEEECC-SSEEEEEESCCSTTCCEEEEEEETTEEEEE
T ss_pred ceeECC--ceeEEEcCcccccccccccccccccccceeEEEEEEEEcCC-CCeEEEEeCCCCCCCCeEEEEEECCEEEEE
Confidence 467988 7999997532 12346789999999999 99999999763 246999999999999999
Q ss_pred EEcCCCCceeecCceeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccc
Q psy12396 69 FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGL 148 (348)
Q Consensus 69 ~~~g~~~~~~~~~~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~ 148 (348)
++.|++ ...+.++..++||+||+|++.|..+.+.|.||+........++....++....+||||+|...... ..+...
T Consensus 91 ~~~G~g-~~~v~s~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~-~~~~~~ 168 (204)
T 1pz7_A 91 YDLGSK-PVVLRSTVPINTNHWTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMERLSVAH-KLPKAY 168 (204)
T ss_dssp EESSSC-CEEEEEEEECCSSSCEEEEEEEETTEEEEEETTSCCEEEECCSSCCCEEECCEEEESSCSCCSTTT-TSCGGG
T ss_pred EECCCC-eEEEECCcccCCCCeEEEEEEEeCCEEEEEECCcceEEEECCCCCceEcCCCCEEEecCCCccccc-cccccc
Confidence 999988 667778889999999999999999999999999764555556556667778899999999854321 111123
Q ss_pred cccceeeeeceEECCEEcCCCC---CCCCcccCCC
Q psy12396 149 NDTFVGCLRNLKSNNKLVQDKH---TSSGVIPCSD 180 (348)
Q Consensus 149 ~~~F~GCi~~l~in~~~~~~~~---~~~g~~~C~~ 180 (348)
..+|.|||++|.+|++.+++.. ...++.+|+.
T Consensus 169 ~~~F~GCi~~l~in~~~~dl~~~~~~~~~v~~C~~ 203 (204)
T 1pz7_A 169 STGFIGCIRDVIVDRQELHLVEDALNNPTILHCSA 203 (204)
T ss_dssp GSBCEEEEEEEEETTEECCTTTSCSSCCCCCBC--
T ss_pred CCCceEEEEEEEECCEEccchhhhhcCCCCCCCCC
Confidence 5789999999999999998753 2346677864
No 11
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=99.97 E-value=3.4e-29 Score=210.83 Aligned_cols=161 Identities=19% Similarity=0.342 Sum_probs=132.0
Q ss_pred eeeEeCCCCeeeEEecCCcC---cccceEEEEEEEEcCCCCCeEEEEEecC--CCCcEEEEEEeCcEEEEEEEcCCCCce
Q psy12396 3 YYVIAGTSKSSRIEYPTITG---RFKNKFDFSIDIKTTSEQDGIIFYVADV--KHIDYVALYVKDGQIHYSFNCGSGPMA 77 (348)
Q Consensus 3 ~~~~F~g~~~sy~~~~~~~~---~~~~~~~i~~~FrT~~~~~GlLl~~~~~--~~~~~l~l~L~~G~l~~~~~~g~~~~~ 77 (348)
|+++|.| +||++|+.++. ..+...+|+|+|||.+ ++|+|||.++. ...+|++|+|.+|+|++.++.|++ ..
T Consensus 10 ~~~~F~g--~syl~~~~~~~~~~~~~~~~~isl~frT~~-~~GlLl~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~g-~~ 85 (189)
T 3pve_A 10 FLADFNG--FSYLELKGLHTFERDLGEKMALEMVFLARG-PSGLLLYNGQKTDGKGDFVSLALHNRHLEFRYDLGKG-AA 85 (189)
T ss_dssp CCEEEES--SCEEEECCGGGC-------CEEEEEEEESS-SCEEEEEEESCC-CCSCEEEEEEETTEEEEEEESSSC-EE
T ss_pred eeeEECC--CceEEEcCcccccccccceEEEEEEEEeCC-CCEEEEEecCCCCCCCCeEEEEEECCEEEEEEecCCC-CE
Confidence 7899999 69999998643 1245789999999999 99999999974 357999999999999999999988 67
Q ss_pred eecCceeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeee
Q psy12396 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR 157 (348)
Q Consensus 78 ~~~~~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~ 157 (348)
.+.++..++||+||+|.+.+.++.+.|.||++.......++....+++...+||||+|..... ........+|.|||+
T Consensus 86 ~l~s~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~--~~~~~~~~~F~GCi~ 163 (189)
T 3pve_A 86 IIRSKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTMLNLKEPLYVGGAPDFSKL--ARGAAVASGFDGAIQ 163 (189)
T ss_dssp EEECSSCCCTTSEEEEEEEEETTEEEEEETTSCCEEEECCSSCCCCCCCSCEEESCCSCGGGS--CGGGCCCSBCEEEEE
T ss_pred EEEcCcccCCCCEEEEEEEEeCCEEEEEECCceeEeEEcCCCcceecCCCCEEECCcCchhhc--ccccccCCCCcEEce
Confidence 778889999999999999999999999999986555566666667788888999999875321 111234578999999
Q ss_pred ceEECCEEcCCC
Q psy12396 158 NLKSNNKLVQDK 169 (348)
Q Consensus 158 ~l~in~~~~~~~ 169 (348)
++.+|++.++++
T Consensus 164 ~v~ing~~l~~~ 175 (189)
T 3pve_A 164 LVSLRGHQLLTQ 175 (189)
T ss_dssp EEEETTEECCBG
T ss_pred EEEECCEEccCh
Confidence 999999999654
No 12
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=99.97 E-value=1.6e-29 Score=213.84 Aligned_cols=172 Identities=23% Similarity=0.461 Sum_probs=136.5
Q ss_pred ceeeEeCCCCeeeEEecCCcC---cccceEEEEEEEEcCCCCCeEEEEEecC-----CCCcEEEEEEeCcEEEEEEEcCC
Q psy12396 2 SYYVIAGTSKSSRIEYPTITG---RFKNKFDFSIDIKTTSEQDGIIFYVADV-----KHIDYVALYVKDGQIHYSFNCGS 73 (348)
Q Consensus 2 ~~~~~F~g~~~sy~~~~~~~~---~~~~~~~i~~~FrT~~~~~GlLl~~~~~-----~~~~~l~l~L~~G~l~~~~~~g~ 73 (348)
.|+++|.| +||++||.... ......+|+|+|||.+ ++|+|||.+.. ...+|++|+|.+|+|++.++.|+
T Consensus 5 ~~~~~F~G--~syl~lp~~~~~~~~~~~~~~is~~frT~~-~~GlLl~~~~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~ 81 (195)
T 3sh4_A 5 QYGAYFHD--DGFLAFPGHVFSRSLPEVPETIELEVRTST-ASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGS 81 (195)
T ss_dssp TTEEEEEE--EEEEEECGGGGCCCSTTCCEEEEEEEEECC-SSEEEEEECCCTTCTTSTTCEEEEEEETTEEEEEEECSS
T ss_pred cccCEECC--CEEEEEccccccccccccceEEEEEEEeCC-CCcEEEEecccccCCCCCCcEEEEEEeCCEEEEEEECCC
Confidence 47899999 79999987521 1234689999999999 99999999752 34699999999999999999998
Q ss_pred CCceeecCceeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccce
Q psy12396 74 GPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFV 153 (348)
Q Consensus 74 ~~~~~~~~~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~ 153 (348)
+ ...+.++..++||+||+|.+.+..+.+.|.||+........++....++....+||||+|..... .......+|.
T Consensus 82 g-~~~~~s~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~---~~~~~~~~F~ 157 (195)
T 3sh4_A 82 G-EARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATL---TGGRFSSGIT 157 (195)
T ss_dssp C-EEEEEEEEECCSSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCCCCCCSCEEESCCTTHHHH---TTTSCCCCCS
T ss_pred C-cEEEEcCceeCCCCeEEEEEEEeCCEEEEEECCeeeeeeeCCCCcccccCCCCEEECCCCCcccc---cccccccCCE
Confidence 8 66777888999999999999999999999999987555556666666778889999999864211 1112457899
Q ss_pred eeeeceEEC--------CEEcCCCCC---CCCcccCCC
Q psy12396 154 GCLRNLKSN--------NKLVQDKHT---SSGVIPCSD 180 (348)
Q Consensus 154 GCi~~l~in--------~~~~~~~~~---~~g~~~C~~ 180 (348)
|||+++.+| ++.+++... ..++.+|+.
T Consensus 158 GCi~~l~in~~~~~~~~~~~ldl~~~a~~~~nv~~C~~ 195 (195)
T 3sh4_A 158 GCVKNLVLHSARPGAPPPQPLDLQHRAQAGANTRPCPS 195 (195)
T ss_dssp EEEEEEEEEECCTTCCCCCCCCTTTSCSEEEEEEECCC
T ss_pred EEEEEEEECCcCCCCCCceeecchhhhccCCccCCCCC
Confidence 999999997 455665432 246788974
No 13
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=99.96 E-value=3.2e-29 Score=213.75 Aligned_cols=182 Identities=21% Similarity=0.309 Sum_probs=126.2
Q ss_pred eEeCCCC----eeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeec
Q psy12396 5 VIAGTSK----SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSS 80 (348)
Q Consensus 5 ~~F~g~~----~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~ 80 (348)
.+|++.. -+|+.|+.... ...+|+|+|||.+ ++|+|||.+.....||++|+|++|+|+++++.|++ ...+.
T Consensus 16 ~~F~~~~~~~~~~y~~~~~~~~---~~~~is~~frT~~-~~GlLly~~~~~~~d~~~l~L~~G~l~~~~~~g~~-~~~~~ 90 (205)
T 1f5f_A 16 VHLSNGPGQEPIAVMTFDLTKI---TKTSSSFEVRTWD-PEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWA-QLTVG 90 (205)
T ss_dssp EESCCTTCCSCSEEEEEEGGGC---CCCEEEEEEEESC-SSEEEEEEEEETTTEEEEEEEETTEEEEEEESSSC-EEEEE
T ss_pred EEeccCCCCcEeEEEEECCCCC---CceEEEEEEEeCC-CCEEEEEeCCCCCCCEEEEEEECCEEEEEEECCCc-eEEEe
Confidence 5677543 27788875332 4589999999999 99999999886557999999999999999999888 67777
Q ss_pred CceeecCCCcEEEEEEEeCcEEEEEECCeeeeeee-ecCCCc-cccccCCeEEeccCCCCcceeccCccccccceeeeec
Q psy12396 81 GDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGE-SKGSSK-TLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRN 158 (348)
Q Consensus 81 ~~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~-~~~~~~-~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~ 158 (348)
++..+|||+||+|++.+..+.+.|.||++...... ...... .......+||||+|..... . ......+|.|||++
T Consensus 91 s~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~~~~~~~~lyiGG~p~~~~~-~--~~~~~~~F~GCi~~ 167 (205)
T 1f5f_A 91 AGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASN-L--RLPLVPALDGCLRR 167 (205)
T ss_dssp CSCCCCSSSCEEEEEEEETTEEEEEETTEEEEEECSCCCCC----CCEEEEEESSCSSCGGG-S--SSCCCCCCCEEEEE
T ss_pred cCCccCCCCCEEEEEEEeCCEEEEEECCeeeeeeeccCCCcccccCCCceEEEeCccCcccc-c--cccCCCCeeEEeee
Confidence 88899999999999999999999999998744322 111111 1222257999999975332 1 12346789999999
Q ss_pred eEECCEEcCCCC-CCCCcccCCCCCccceEEecCCeeE
Q psy12396 159 LKSNNKLVQDKH-TSSGVIPCSDKTESGVFFYNSGGYV 195 (348)
Q Consensus 159 l~in~~~~~~~~-~~~g~~~C~~~~~~~~~f~~~~s~~ 195 (348)
+.+|++.+++.. ...++.+|....++|.+|. +++|+
T Consensus 168 l~i~~~~~~l~~~~~~~v~~C~~~~e~G~~F~-g~g~~ 204 (205)
T 1f5f_A 168 DSWLDKQAEISASAPTSLRSCDVESNPGIFLP-PGTQA 204 (205)
T ss_dssp EECSCGGGEEEEECSSCCCBC-----------------
T ss_pred eEECCeeccccccCcccCCCCCCcCCCCcEEC-CCccc
Confidence 999988776532 3367899999999999996 45665
No 14
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=99.96 E-value=1.1e-28 Score=203.97 Aligned_cols=164 Identities=23% Similarity=0.294 Sum_probs=128.5
Q ss_pred eeeEeCCCCeeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeecCc
Q psy12396 3 YYVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD 82 (348)
Q Consensus 3 ~~~~F~g~~~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~~ 82 (348)
++..|.|.+.+|+.|+.... ...+|+|+|||.+ ++|+|||.+.....||++|+|++|+|++.++.|++ ...+.++
T Consensus 6 l~~~F~g~s~~~l~f~~~~~---~~~~is~~FrT~~-~~GlLly~~~~~~~df~~l~L~~G~l~~~~~~g~~-~~~~~s~ 80 (170)
T 1d2s_A 6 LSNGPGQEPIAVMTFDLTKI---TKTSSSFEVRTWD-PEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWA-QLTVGAG 80 (170)
T ss_dssp SCCTTCCSCSEEEEEEGGGC---CCCEEEEEEEESC-SSEEEEEEEEETTTEEEEEEEETTEEEEEEESSSC-EEEEECS
T ss_pred eccCCCCCceEEEEecCCCC---CceEEEEEEEeCC-CCEEEEEecCCCCCCEEEEEEeCCEEEEEEECCCc-eEEEeCC
Confidence 45678998788999986443 5679999999999 99999999885557999999999999999999888 7777788
Q ss_pred eeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeeeceEEC
Q psy12396 83 KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSN 162 (348)
Q Consensus 83 ~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in 162 (348)
..+|||+||+|++.+.++.+.|.||++........ ..+.. ..+||||+|...... ......+|.|||+++.+|
T Consensus 81 ~~vnDG~WH~V~v~~~~~~~~L~VD~~~~~~~~~~---~~l~~-~~lylGG~p~~~~~~---~~~~~~~F~GCi~~l~in 153 (170)
T 1d2s_A 81 PRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQV---SGHPI-MRIALGGLLFPASNL---RLPLVPALDGCLRRDSWL 153 (170)
T ss_dssp CCCCSSSCEEEEEEEETTEEEEEETTEEEEEETTC---CCCCE-EEEEESSCSSCGGGS---SSCCCCCCCEEEEEEEES
T ss_pred CccCCCCCEEEEEEEeCCEEEEEECCeeeeeeccC---CCccc-ccEEEECcccchhhc---ccCCCCCeeeEeEEeEEC
Confidence 89999999999999999999999999874332211 12333 579999999754321 123467899999999999
Q ss_pred CEEcCCCCC-CCCcccC
Q psy12396 163 NKLVQDKHT-SSGVIPC 178 (348)
Q Consensus 163 ~~~~~~~~~-~~g~~~C 178 (348)
++.+.+... ...+.+|
T Consensus 154 ~~~~~l~~~~~~~~~~c 170 (170)
T 1d2s_A 154 DKQAEISASAPTSLRSC 170 (170)
T ss_dssp CGGGEEEEECSSCCCBC
T ss_pred CccceeeeccccCCCCC
Confidence 987654322 2345555
No 15
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=99.96 E-value=8.5e-28 Score=201.00 Aligned_cols=155 Identities=21% Similarity=0.256 Sum_probs=127.8
Q ss_pred ceeeEeCCCCeeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeecC
Q psy12396 2 SYYVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG 81 (348)
Q Consensus 2 ~~~~~F~g~~~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~ 81 (348)
+-.++|.| +||+.|+..+.......+|+|+|||.+ ++|+|||.++....||++|+|.+|+|++.++.|++ ...+.+
T Consensus 5 ~~~~~F~G--~sy~~~~~~~~~~~~~~~isl~FrT~~-~~GlLl~~~~~~~~d~l~L~L~~G~l~~~~~~G~~-~~~~~~ 80 (182)
T 2r16_A 5 ATVLSYDG--SMFMKIQLPVVMHTEAEDVSLRFRSQR-AYGILMATTSRDSADTLRLELDAGRVKLTVNLGKG-PETLFA 80 (182)
T ss_dssp CCEEEEES--SCCEEEEEEEEEEESEEEEEEEEECSC-SSEEEEEEECSSSCCEEEEEEETTEEEEEEESSSC-CEEEEE
T ss_pred cccEEECC--CceEEEECCCcCCccceEEEEEEEECC-CCEEEEEeCCCCCCCEEEEEEECCEEEEEEECCCC-ceEEEc
Confidence 34688999 599887532222457899999999999 99999999975567999999999999999999988 567778
Q ss_pred ceeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeeeceEE
Q psy12396 82 DKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKS 161 (348)
Q Consensus 82 ~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~i 161 (348)
+..+|||+||+|++.+.++.+.|.||++.......++....++.. .+|+||.|..... .....+|.|||+++.+
T Consensus 81 ~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~-~l~iGG~~~~~~~-----~~~~~~F~GCi~~l~i 154 (182)
T 2r16_A 81 GYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFH-NIETGIITERRYL-----SSVPSNFIGHLQSLTF 154 (182)
T ss_dssp CSSCCSSSCEEEEEEEETTEEEEEETTCCEEEEECCSSCCCEEEE-EEEESSCCCCTTC-----SSCCCCCEEEEEEEEE
T ss_pred CcccCCCCeEEEEEEEECCEEEEEECCceeEeEECCCCccEEecc-CeEECCccccccc-----CCCCCCCEEEEeEEEE
Confidence 889999999999999999999999999875555566666667776 6999999864221 1234689999999999
Q ss_pred CCEEc
Q psy12396 162 NNKLV 166 (348)
Q Consensus 162 n~~~~ 166 (348)
|+..+
T Consensus 155 n~~~~ 159 (182)
T 2r16_A 155 NGMAY 159 (182)
T ss_dssp TTEEH
T ss_pred CCEEh
Confidence 99986
No 16
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=99.95 E-value=7.8e-27 Score=195.75 Aligned_cols=157 Identities=23% Similarity=0.401 Sum_probs=125.0
Q ss_pred ceeeEeCCCCeeeEEecCCcCc-ccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCcee--
Q psy12396 2 SYYVIAGTSKSSRIEYPTITGR-FKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMAL-- 78 (348)
Q Consensus 2 ~~~~~F~g~~~sy~~~~~~~~~-~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~-- 78 (348)
+.+++|.| +||+.|+..... .....+|+|+|||.+ ++|+|||.++ ..+|++|+|.+|+|++.++.|++ ...
T Consensus 5 ~~~~~F~G--~sy~~~~~~~~~~~~~~~~isl~frT~~-~~GlLl~~g~--~~d~l~l~L~~G~l~~~~~~G~g-~~~~~ 78 (184)
T 2h0b_A 5 EYIATFKG--SEYFCYDLSQNPIQSSSDEITLSFKTLQ-RNGLMLHTGK--SADYVNLALKNGAVSLVINLGSG-AFEAL 78 (184)
T ss_dssp CCEEEEES--SEEEEEECSSSCEEESEEEEEEEEEESC-SCEEEEEECC--TTEEEEEEEETTEEEEEEEESSC-EEEEE
T ss_pred cceeEECC--ceEEEEccccCccccCccEEEEEEEeCC-CCEEEEEeCC--CCCEEEEEEECCEEEEEEECCCC-eEEEE
Confidence 46789999 699999764321 346789999999999 9999999964 57999999999999999999988 432
Q ss_pred -ecCceeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeee
Q psy12396 79 -SSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR 157 (348)
Q Consensus 79 -~~~~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~ 157 (348)
...+..++||+||+|++.+..+.+.|.||++.......++....++....+||||.|..... .......+|.|||+
T Consensus 79 ~~~~~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~lGG~p~~~~~---~~~~~~~~F~GCi~ 155 (184)
T 2h0b_A 79 VEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL---PGSPVSNNFMGCLK 155 (184)
T ss_dssp ECCSSSCSSSSSCEEEEEEEETTEEEEEETTTEEEEEECSTTCCCEEECSEEEESCCTTGGGS---TTCSCCCBCEEEEE
T ss_pred EecCCcccCCCCeEEEEEEEeCCEEEEEEcCceeeeeECCCCceeccCCCCEEECCCCccccC---cCCcccCCCEEEee
Confidence 24677999999999999999999999999987554444544445666678999999975321 11224578999999
Q ss_pred ceEECCEEcC
Q psy12396 158 NLKSNNKLVQ 167 (348)
Q Consensus 158 ~l~in~~~~~ 167 (348)
++.+|++.++
T Consensus 156 ~v~in~~~~~ 165 (184)
T 2h0b_A 156 EVVYKNNDVR 165 (184)
T ss_dssp EEEEEESSCE
T ss_pred EEEECCEEcc
Confidence 9999987754
No 17
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=99.95 E-value=3.2e-26 Score=190.74 Aligned_cols=149 Identities=23% Similarity=0.329 Sum_probs=118.6
Q ss_pred eeEeCCCCeeeEEecCCcC--cccceEEEEEEEEcCCCCCeEEEEEecC-CCCcEEEEEEeCcEEEEEEEcCCCCceeec
Q psy12396 4 YVIAGTSKSSRIEYPTITG--RFKNKFDFSIDIKTTSEQDGIIFYVADV-KHIDYVALYVKDGQIHYSFNCGSGPMALSS 80 (348)
Q Consensus 4 ~~~F~g~~~sy~~~~~~~~--~~~~~~~i~~~FrT~~~~~GlLl~~~~~-~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~ 80 (348)
.++|++. +||+.|...+. ......+|+|+|||.+ ++|+|||..+. ...||++|+|.+|+|++.++.|++ ...+.
T Consensus 6 ~~~F~~~-~s~l~y~~~~~~~~~~~~~~isl~FrT~~-~~GlLl~~~~~~~~~dfi~l~L~~G~l~~~~~~G~~-~~~~~ 82 (178)
T 3bod_A 6 TYIFSKG-GGQITYKWPPNDRPSTRADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTD-DIAIE 82 (178)
T ss_dssp EEEEEEE-EEEEEEECCTTSCCCBSEEEEEEEEECCC-SSEEEEEEEESSSSCCEEEEEEETTEEEEEEESSSC-CEEEE
T ss_pred EEEECCC-CcEEEEECCCcCCCCccccEEEEEEEECC-CCEEEEEEcCCCCCCCEEEEEEECCEEEEEEECCCC-ceEEe
Confidence 5678754 69999865331 2345789999999999 99999997632 357999999999999999999988 44444
Q ss_pred -CceeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCC-CccccccCCeEEeccCCCCcceeccCccccccceeeeec
Q psy12396 81 -GDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGS-SKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRN 158 (348)
Q Consensus 81 -~~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~-~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~ 158 (348)
++..++||+||+|++.|.++.+.|.||++.......++. ...++....+||||.|. ..+|.|||++
T Consensus 83 ~~~~~vnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~------------~~~F~GCi~~ 150 (178)
T 3bod_A 83 ESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ------------GQPFQGQLSG 150 (178)
T ss_dssp CCSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCCSCCCCCBCCEEEEEESCCTT------------SCBCCEEEEE
T ss_pred cCCcCccCCCeEEEEEEEeCCEEEEEEeCCceeeeecCCCcceEEeCCCcEEEecccC------------CCCCEEEEEE
Confidence 567999999999999999999999999976433323332 24466777899999985 2679999999
Q ss_pred eEECCEE-cC
Q psy12396 159 LKSNNKL-VQ 167 (348)
Q Consensus 159 l~in~~~-~~ 167 (348)
+.+|+.. ++
T Consensus 151 v~in~~~vl~ 160 (178)
T 3bod_A 151 LYYNGLKVLN 160 (178)
T ss_dssp EEETTEEHHH
T ss_pred EEECCEehHh
Confidence 9999998 44
No 18
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=99.94 E-value=9.4e-26 Score=190.04 Aligned_cols=157 Identities=18% Similarity=0.305 Sum_probs=123.4
Q ss_pred cceEEecCCeeEEeeecc------------cccceEEEEEEEEeCCCCeEEEEEcC---CCCeEEEEEECCEEEEEEECC
Q psy12396 184 SGVFFYNSGGYVKGVEQF------------RVGREMELKMDVKPRNISGLLLSVHS---KKDYFILQMIDGSVKATVDNG 248 (348)
Q Consensus 184 ~~~~f~~~~s~~~~~~~~------------~~~~~~~i~~~frT~~~~Glll~~~~---~~~~l~l~l~~G~l~~~~~~~ 248 (348)
....|. |++|+.|.... ......+|+|.|||++++|+|||..+ ..+|++|+|.+|+|+++++.|
T Consensus 3 ~~~~F~-G~sy~~y~~~~~~~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~~~~d~l~l~L~~G~l~~~~~~G 81 (191)
T 3v64_A 3 ETLAFD-GRTYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEATQGLVLWIGKAAERADYMALAIVDGHLQLSYDLG 81 (191)
T ss_dssp CEEEEE-SSCCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSCSSEEEEEESCCSTTCCEEEEEEETTEEEEEEESS
T ss_pred ccceec-CceeEEEccccccccccccccccccccceEEEEEEEeCCCCeEEEEeCCCCCCCcEEEEEEECCEEEEEEECC
Confidence 345684 78999997542 22456899999999999999999875 479999999999999999999
Q ss_pred CcceEEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCcc
Q psy12396 249 KGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRT 328 (348)
Q Consensus 249 ~~~~~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~ 328 (348)
++...+ .+..+++||+||+|.+.|.++.++|+||+.. ......+.....++....+||||.|........ ....
T Consensus 82 ~~~~~l----~s~~~v~Dg~WH~V~v~r~~~~~~L~VD~~~-~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~-~~~~ 155 (191)
T 3v64_A 82 SQPVVL----RSTVKVNTNRWLRIRAHREHREGSLQVGNEA-PVTGSSPLGATQLDTDGALWLGGLQKLPVGQAL-PKAY 155 (191)
T ss_dssp SCCEEE----EEEEECTTSSCEEEEEEEETTEEEEEETTSC-CEEEECCTTCCCEEECSEEEESCCSSCCSSCCS-CGGG
T ss_pred CccEEE----ecCccccCCCCEEEEEEEeCCEEEEEECCee-eEeEECCCCcceeccCCceEEcccCcccccccc-cccc
Confidence 887665 3467899999999999999999999999986 322222344556777889999999986411111 1235
Q ss_pred ccceeeeeecCceeeccCC
Q psy12396 329 KRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 329 ~~~F~GCi~~~~~~~~~~~ 347 (348)
..+|.|||+++..+.+|++
T Consensus 156 ~~~F~GCi~~l~in~~~l~ 174 (191)
T 3v64_A 156 GTGFVGCLRDVVVGHRQLH 174 (191)
T ss_dssp TSBCEEEEEEEEETTEECC
T ss_pred cCCceEEeeEEEECCEEcc
Confidence 6799999999999988864
No 19
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=99.94 E-value=1.8e-25 Score=187.44 Aligned_cols=158 Identities=17% Similarity=0.276 Sum_probs=124.2
Q ss_pred ccceEEecCCeeEEeeeccc--ccceEEEEEEEEeCCCCeEEEEEcCCCCeEEEEEECCEEEEEEECCCcceEEEEcCCC
Q psy12396 183 ESGVFFYNSGGYVKGVEQFR--VGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSD 260 (348)
Q Consensus 183 ~~~~~f~~~~s~~~~~~~~~--~~~~~~i~~~frT~~~~Glll~~~~~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s 260 (348)
..+.+|. +++|+.+..... .....+|+|.|||++++|+|||..+..+|++|+|.+|+++++++.|++..... ...+
T Consensus 5 ~~~~~F~-G~sy~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~g~~~d~l~l~L~~G~l~~~~~~G~g~~~~~-~~~~ 82 (184)
T 2h0b_A 5 EYIATFK-GSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEAL-VEPV 82 (184)
T ss_dssp CCEEEEE-SSEEEEEECSSSCEEESEEEEEEEEEESCSCEEEEEECCTTEEEEEEEETTEEEEEEEESSCEEEEE-ECCS
T ss_pred cceeEEC-CceEEEEccccCccccCccEEEEEEEeCCCCEEEEEeCCCCCEEEEEEECCEEEEEEECCCCeEEEE-EecC
Confidence 4567785 679999975422 23468999999999999999999767899999999999999999998764431 1246
Q ss_pred CeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCc
Q psy12396 261 PYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANC 340 (348)
Q Consensus 261 ~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~ 340 (348)
...+|||+||+|++.|.++.++|.||+.. ......+.....++....+||||.|... ..+......+|.|||+++.
T Consensus 83 ~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~-~~~~~~~~~~~~l~~~~~l~lGG~p~~~---~~~~~~~~~~F~GCi~~v~ 158 (184)
T 2h0b_A 83 NGKFNDNAWHDVKVTRNLRQVTISVDGIL-TTTGYTQEDYTMLGSDDFFYVGGSPSTA---DLPGSPVSNNFMGCLKEVV 158 (184)
T ss_dssp SSCSSSSSCEEEEEEEETTEEEEEETTTE-EEEEECSTTCCCEEECSEEEESCCTTGG---GSTTCSCCCBCEEEEEEEE
T ss_pred CcccCCCCeEEEEEEEeCCEEEEEEcCce-eeeeECCCCceeccCCCCEEECCCCccc---cCcCCcccCCCEEEeeEEE
Confidence 78999999999999999999999999986 3322223334445667789999999864 3344556789999999999
Q ss_pred eeeccC
Q psy12396 341 KAVHPL 346 (348)
Q Consensus 341 ~~~~~~ 346 (348)
.+.+++
T Consensus 159 in~~~~ 164 (184)
T 2h0b_A 159 YKNNDV 164 (184)
T ss_dssp EEESSC
T ss_pred ECCEEc
Confidence 988875
No 20
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=99.93 E-value=1.8e-25 Score=190.40 Aligned_cols=157 Identities=21% Similarity=0.316 Sum_probs=122.7
Q ss_pred cceEEecCCeeEEeeec---------------ccccceEEEEEEEEeCCCCeEEEEEcC---CCCeEEEEEECCEEEEEE
Q psy12396 184 SGVFFYNSGGYVKGVEQ---------------FRVGREMELKMDVKPRNISGLLLSVHS---KKDYFILQMIDGSVKATV 245 (348)
Q Consensus 184 ~~~~f~~~~s~~~~~~~---------------~~~~~~~~i~~~frT~~~~Glll~~~~---~~~~l~l~l~~G~l~~~~ 245 (348)
.+.+| .+.+|+.|... +......+|+|+|||++++|+|||... ..+|++|+|.+|+|++++
T Consensus 13 ~~~~F-~G~sy~~~~~~~~~~~~~l~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~dfl~l~L~~G~l~~~~ 91 (204)
T 1pz7_A 13 EAIAF-DGRTYMEYHNAVTKSPDALDYPAEPSEKALQSNHFELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMMY 91 (204)
T ss_dssp CCEEE-ESSCCEEEECCSCCC-------CCSSCEEESEEEEEEEEEECCSSEEEEEESCCSTTCCEEEEEEETTEEEEEE
T ss_pred cceeE-CCceeEEEcCcccccccccccccccccccceeEEEEEEEEcCCCCeEEEEeCCCCCCCCeEEEEEECCEEEEEE
Confidence 45678 47899999632 122246899999999999999999874 479999999999999999
Q ss_pred ECCCcceEEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCC
Q psy12396 246 DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSG 325 (348)
Q Consensus 246 ~~~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~ 325 (348)
+.|++...+ .+..++|||+||+|++.|+++.++|.||+.. ......+.....++....+||||.|........ .
T Consensus 92 ~~G~g~~~v----~s~~~lnDg~WH~V~v~r~~~~~~L~VD~~~-~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~-~ 165 (204)
T 1pz7_A 92 DLGSKPVVL----RSTVPINTNHWTHIKAYRVQREGSLQVGNEA-PITGSSPLGATQLDTDGALWLGGMERLSVAHKL-P 165 (204)
T ss_dssp ESSSCCEEE----EEEEECCSSSCEEEEEEEETTEEEEEETTSC-CEEEECCSSCCCEEECCEEEESSCSCCSTTTTS-C
T ss_pred ECCCCeEEE----ECCcccCCCCeEEEEEEEeCCEEEEEECCcc-eEEEECCCCCceEcCCCCEEEecCCCccccccc-c
Confidence 999887655 3568999999999999999999999999987 333232344555777889999999986411111 1
Q ss_pred CccccceeeeeecCceeeccCC
Q psy12396 326 PRTKRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 326 ~~~~~~F~GCi~~~~~~~~~~~ 347 (348)
.....+|.|||+++..+.++++
T Consensus 166 ~~~~~~F~GCi~~l~in~~~~d 187 (204)
T 1pz7_A 166 KAYSTGFIGCIRDVIVDRQELH 187 (204)
T ss_dssp GGGGSBCEEEEEEEEETTEECC
T ss_pred cccCCCceEEEEEEEECCEEcc
Confidence 2346799999999999988874
No 21
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=99.93 E-value=1.5e-25 Score=192.55 Aligned_cols=148 Identities=24% Similarity=0.346 Sum_probs=112.3
Q ss_pred eeEeCCCCeeeEEecCCc--CcccceEEEEEEEEcCCCCCeEEEEEecCC-CCcEEEEEEeCcEEEEEEEcCCCCceeec
Q psy12396 4 YVIAGTSKSSRIEYPTIT--GRFKNKFDFSIDIKTTSEQDGIIFYVADVK-HIDYVALYVKDGQIHYSFNCGSGPMALSS 80 (348)
Q Consensus 4 ~~~F~g~~~sy~~~~~~~--~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~-~~~~l~l~L~~G~l~~~~~~g~~~~~~~~ 80 (348)
.++|++. .||+.|...+ .......+|+|+|||.+ ++|+|||.+... ..||++|+|++|+|++.++.|++ ...+.
T Consensus 12 ~~~F~~g-~s~l~y~~~~~~~~~~~~~~isl~FrT~~-~~GlLly~~~~~~~~dfi~LeL~~G~l~~~~~~G~~-~~~~~ 88 (220)
T 2r1b_A 12 TYIFSKG-GGQITYKWPPNDRPSTRADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTD-DIAIE 88 (220)
T ss_dssp EEEEEEE-EEEEEEECCGGGCCCBSEEEEEEEEECCC-SSEEEEEEEESTTCCCEEEEEEETTEEEEEEESSSS-CEEEE
T ss_pred eEEECCC-CeEEEEECCCCCcccccCcEEEEEEEeCC-CCEEEEEecCCCCCCCeEEEEEECCEEEEEEECCCC-ceEEE
Confidence 3578654 6999986433 12334568999999999 999999976543 57999999999999999999988 55555
Q ss_pred C-ceeecCCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCc--cc-----------------------------cccCC
Q psy12396 81 G-DKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSK--TL-----------------------------NIFGP 128 (348)
Q Consensus 81 ~-~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~--~l-----------------------------~~~~~ 128 (348)
. ...++||+||+|++.|.++.+.|.||++.......++... .+ +....
T Consensus 89 ~~~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~~~l~~~~~~ip~~~~~~~~~~~~~~~~~~~~~n~~~~ 168 (220)
T 2r1b_A 89 ESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQAT 168 (220)
T ss_dssp CTTCCCCSSSCEEEEEEEETTEEEEEETTSCCEEECC-----------------CHHHHHHHHHHHHHHHGGGSBCCEEE
T ss_pred eCceEecCCceEEEEEEEeCCEEEEEECCcceeeeccCCCccchheeccccccccccccccccccccccccceEecCCCc
Confidence 4 4689999999999999999999999998633322222111 11 22557
Q ss_pred eEEeccCCCCcceeccCccccccceeeeeceEECCEEc
Q psy12396 129 FYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV 166 (348)
Q Consensus 129 ~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in~~~~ 166 (348)
+||||+|. ..+|.|||+++.+|+..+
T Consensus 169 l~lGG~p~------------~~~F~GCi~~l~ing~~v 194 (220)
T 2r1b_A 169 IIIGGKEQ------------GQPFQGQLSGLYYNGLKV 194 (220)
T ss_dssp EEESSTTT------------TCCCCEEEEEEEETTBCH
T ss_pred EEECCccC------------CCCCEEEEeEEEECCChH
Confidence 99999982 367999999999999864
No 22
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=99.93 E-value=1.8e-25 Score=188.89 Aligned_cols=155 Identities=22% Similarity=0.330 Sum_probs=120.5
Q ss_pred ccceEEecCCeeEEeeecc----cccceEEEEEEEEeCCCCeEEEEEcC-------CCCeEEEEEECCEEEEEEECCCcc
Q psy12396 183 ESGVFFYNSGGYVKGVEQF----RVGREMELKMDVKPRNISGLLLSVHS-------KKDYFILQMIDGSVKATVDNGKGP 251 (348)
Q Consensus 183 ~~~~~f~~~~s~~~~~~~~----~~~~~~~i~~~frT~~~~Glll~~~~-------~~~~l~l~l~~G~l~~~~~~~~~~ 251 (348)
..+++|. +++|+.++... ......+|+|.|||++++|+|||... ..+|++|+|.+|+|++.++.|++.
T Consensus 5 ~~~~~F~-G~syl~lp~~~~~~~~~~~~~~is~~frT~~~~GlLl~~~~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~g~ 83 (195)
T 3sh4_A 5 QYGAYFH-DDGFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGE 83 (195)
T ss_dssp TTEEEEE-EEEEEEECGGGGCCCSTTCCEEEEEEEEECCSSEEEEEECCCTTCTTSTTCEEEEEEETTEEEEEEECSSCE
T ss_pred cccCEEC-CCEEEEEccccccccccccceEEEEEEEeCCCCcEEEEecccccCCCCCCcEEEEEEeCCEEEEEEECCCCc
Confidence 4567886 67999997431 12345899999999999999999852 478999999999999999999876
Q ss_pred eEEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccc
Q psy12396 252 ISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRR 331 (348)
Q Consensus 252 ~~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~ 331 (348)
..+ .+...+|||+||+|.+.|.++.++|.||+.. ......+.....++....+||||+|... .........+
T Consensus 84 ~~~----~s~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~-~~~~~~~~~~~~l~~~~~lyvGG~p~~~---~~~~~~~~~~ 155 (195)
T 3sh4_A 84 ARL----VSEDPINDGEWHRVTALREGRRGSIQVDGEE-LVSGRSPGPNVAVNAKGSVYIGGAPDVA---TLTGGRFSSG 155 (195)
T ss_dssp EEE----EEEEECCSSSCEEEEEEEETTEEEEEETTCC-CEEEECCSSCCCCCCCSCEEESCCTTHH---HHTTTSCCCC
T ss_pred EEE----EcCceeCCCCeEEEEEEEeCCEEEEEECCee-eeeeeCCCCcccccCCCCEEECCCCCcc---cccccccccC
Confidence 555 3578999999999999999999999999987 3332223444556777899999998753 1122344679
Q ss_pred eeeeeecCcee-eccC
Q psy12396 332 SVFLINANCKA-VHPL 346 (348)
Q Consensus 332 F~GCi~~~~~~-~~~~ 346 (348)
|.|||+++..+ .+|+
T Consensus 156 F~GCi~~l~in~~~~~ 171 (195)
T 3sh4_A 156 ITGCVKNLVLHSARPG 171 (195)
T ss_dssp CSEEEEEEEEEECCTT
T ss_pred CEEEEEEEEECCcCCC
Confidence 99999999995 4443
No 23
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=99.93 E-value=3.6e-25 Score=190.66 Aligned_cols=148 Identities=24% Similarity=0.342 Sum_probs=116.3
Q ss_pred ceeeEeCCCCeeeEEecCCcC--cccceEEEEEEEEcCCCCCeEEEEEecCC-CCcEEEEEEeCcEEEEEEEcCCCCcee
Q psy12396 2 SYYVIAGTSKSSRIEYPTITG--RFKNKFDFSIDIKTTSEQDGIIFYVADVK-HIDYVALYVKDGQIHYSFNCGSGPMAL 78 (348)
Q Consensus 2 ~~~~~F~g~~~sy~~~~~~~~--~~~~~~~i~~~FrT~~~~~GlLl~~~~~~-~~~~l~l~L~~G~l~~~~~~g~~~~~~ 78 (348)
+|.+.|+| ||+.|...+. ......+|+|+|||.+ ++|+|||.+... ..||++|+|++|+|++.++.|++ ...
T Consensus 40 ~y~f~~~g---s~i~y~~~~~~~~~~~~~~isl~FrT~~-~~GlLl~~~~~~~~~dfi~L~L~~G~l~~~~~~G~~-~~~ 114 (226)
T 2r1d_A 40 TYIFSKGG---GQITYKWPPNDRPSTRADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTD-DIA 114 (226)
T ss_dssp EEEEEEEE---EEEEEECCGGGCCCBSEEEEEEEEECCC-SSEEEEEEEECTTCCCEEEEEEETTEEEEEEESSSC-EEE
T ss_pred EEEEecCC---cEEEEECCccccccccccEEEEEEEeCC-CCEEEEEecCCCCCCCEEEEEEECCEEEEEEECCCC-cEE
Confidence 46555554 8888864331 1235568999999999 999999986532 57999999999999999999988 555
Q ss_pred ecC-ceeecCCCcEEEEEEEeCcEEEEEECCeeeee-eeecCCCccccccCCeEEeccCCCCcceeccCccccccceeee
Q psy12396 79 SSG-DKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE-GESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCL 156 (348)
Q Consensus 79 ~~~-~~~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~-~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi 156 (348)
+.. +..++||+||+|++.|.++.+.|+||++.... ...++....++....+||||+|. ..+|.|||
T Consensus 115 ~~~~~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~------------~~~F~GCi 182 (226)
T 2r1d_A 115 IEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ------------GQPFQGQL 182 (226)
T ss_dssp EECCSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCSSCCCCCBCSEEEEEESSTTT------------TCCCCEEE
T ss_pred EEeCCeEecCCCCEEEEEEEeCCEEEEEEcCccceEEecCCCcceeccCCCeEEEccccC------------CCCCeEEE
Confidence 554 57899999999999999999999999975322 22333445567777899999985 16799999
Q ss_pred eceEECCEEc
Q psy12396 157 RNLKSNNKLV 166 (348)
Q Consensus 157 ~~l~in~~~~ 166 (348)
+++.+|+..+
T Consensus 183 ~~v~ing~~v 192 (226)
T 2r1d_A 183 SGLYYNGLKV 192 (226)
T ss_dssp EEEEETTBCH
T ss_pred eeEEECCEeH
Confidence 9999999864
No 24
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=99.93 E-value=5.3e-25 Score=185.19 Aligned_cols=154 Identities=21% Similarity=0.219 Sum_probs=120.1
Q ss_pred eEEecCCeeEEeeeccc----ccceEEEEEEEEeCCCCeEEEEEcC----CCCeEEEEEECCEEEEEEECCCcceEEEEc
Q psy12396 186 VFFYNSGGYVKGVEQFR----VGREMELKMDVKPRNISGLLLSVHS----KKDYFILQMIDGSVKATVDNGKGPISAIYT 257 (348)
Q Consensus 186 ~~f~~~~s~~~~~~~~~----~~~~~~i~~~frT~~~~Glll~~~~----~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~ 257 (348)
..|. +.||+.++.... .....+|+|.|||++++|+|||..+ ..+|++|+|.+|++++.++.+++...+
T Consensus 12 ~~F~-g~syl~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~g~~~l--- 87 (189)
T 3pve_A 12 ADFN-GFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRHLEFRYDLGKGAAII--- 87 (189)
T ss_dssp EEEE-SSCEEEECCGGGC-------CEEEEEEEESSSCEEEEEEESCC-CCSCEEEEEEETTEEEEEEESSSCEEEE---
T ss_pred eEEC-CCceEEEcCcccccccccceEEEEEEEEeCCCCEEEEEecCCCCCCCCeEEEEEECCEEEEEEecCCCCEEE---
Confidence 4575 679999974321 1346899999999999999999875 379999999999999999999886655
Q ss_pred CCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeee
Q psy12396 258 PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLIN 337 (348)
Q Consensus 258 ~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~ 337 (348)
.+..+++||+||+|.+.|.++.++|.||+.. ......+.....++....+||||.|.... .........+|.|||+
T Consensus 88 -~s~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~-~~~~~~~~~~~~l~~~~~lyvGG~p~~~~--~~~~~~~~~~F~GCi~ 163 (189)
T 3pve_A 88 -RSKEPIALGTWVRVFLERNGRKGALQVGDGP-RVLGESPVPHTMLNLKEPLYVGGAPDFSK--LARGAAVASGFDGAIQ 163 (189)
T ss_dssp -ECSSCCCTTSEEEEEEEEETTEEEEEETTSC-CEEEECCSSCCCCCCCSCEEESCCSCGGG--SCGGGCCCSBCEEEEE
T ss_pred -EcCcccCCCCEEEEEEEEeCCEEEEEECCce-eEeEEcCCCcceecCCCCEEECCcCchhh--cccccccCCCCcEEce
Confidence 3678999999999999999999999999986 32222234455567778899999997641 1122345689999999
Q ss_pred cCceeeccCC
Q psy12396 338 ANCKAVHPLT 347 (348)
Q Consensus 338 ~~~~~~~~~~ 347 (348)
++..+.+|++
T Consensus 164 ~v~ing~~l~ 173 (189)
T 3pve_A 164 LVSLRGHQLL 173 (189)
T ss_dssp EEEETTEECC
T ss_pred EEEECCEEcc
Confidence 9999988873
No 25
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=99.92 E-value=3e-24 Score=178.78 Aligned_cols=146 Identities=16% Similarity=0.167 Sum_probs=114.7
Q ss_pred ceEEecCCeeEEeeecc--c-ccceEEEEEEEEeCCCCeEEEEEc---CCCCeEEEEEECCEEEEEEECCCcceEEEEcC
Q psy12396 185 GVFFYNSGGYVKGVEQF--R-VGREMELKMDVKPRNISGLLLSVH---SKKDYFILQMIDGSVKATVDNGKGPISAIYTP 258 (348)
Q Consensus 185 ~~~f~~~~s~~~~~~~~--~-~~~~~~i~~~frT~~~~Glll~~~---~~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~ 258 (348)
...|.++.+|+.|..+. . .....+|+|.|||++++|+|||.. +..+|++|+|.+|+|+++++.|++...+.
T Consensus 6 ~~~F~~~~s~l~y~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~~~~dfi~l~L~~G~l~~~~~~G~~~~~~~--- 82 (178)
T 3bod_A 6 TYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIE--- 82 (178)
T ss_dssp EEEEEEEEEEEEEECCTTSCCCBSEEEEEEEEECCCSSEEEEEEEESSSSCCEEEEEEETTEEEEEEESSSCCEEEE---
T ss_pred EEEECCCCcEEEEECCCcCCCCccccEEEEEEEECCCCEEEEEEcCCCCCCCEEEEEEECCEEEEEEECCCCceEEe---
Confidence 34576566898886443 1 234579999999999999999953 35899999999999999999998876662
Q ss_pred CCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeec
Q psy12396 259 SDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINA 338 (348)
Q Consensus 259 ~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~ 338 (348)
.+...+|||+||+|++.|.++.++|.||+...............++....+||||.|.. .+|.|||++
T Consensus 83 ~~~~~vnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~~------------~~F~GCi~~ 150 (178)
T 3bod_A 83 ESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQG------------QPFQGQLSG 150 (178)
T ss_dssp CCSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCCSCCCCCBCCEEEEEESCCTTS------------CBCCEEEEE
T ss_pred cCCcCccCCCeEEEEEEEeCCEEEEEEeCCceeeeecCCCcceEEeCCCcEEEecccCC------------CCCEEEEEE
Confidence 35678999999999999999999999999872222121122244666778999999862 689999999
Q ss_pred Cceeecc
Q psy12396 339 NCKAVHP 345 (348)
Q Consensus 339 ~~~~~~~ 345 (348)
+..+.++
T Consensus 151 v~in~~~ 157 (178)
T 3bod_A 151 LYYNGLK 157 (178)
T ss_dssp EEETTEE
T ss_pred EEECCEe
Confidence 9988776
No 26
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=99.92 E-value=1.5e-24 Score=179.08 Aligned_cols=139 Identities=12% Similarity=0.108 Sum_probs=106.7
Q ss_pred eEEeeecccccceEEEEEEEEeCCCCeEEEEEcCC--CCeEEEEEECCEEEEEEECCCcceEEEEcCCCCeeecCCcEEE
Q psy12396 194 YVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHT 271 (348)
Q Consensus 194 ~~~~~~~~~~~~~~~i~~~frT~~~~Glll~~~~~--~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~ 271 (348)
|+.+... .....+|+|+|||++++|+|||.... .+|++|+|.+|+|+++++.+.+...+ .+...+|||+||+
T Consensus 17 ~l~f~~~--~~~~~~is~~FrT~~~~GlLly~~~~~~~df~~l~L~~G~l~~~~~~g~~~~~~----~s~~~vnDG~WH~ 90 (170)
T 1d2s_A 17 VMTFDLT--KITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTV----GAGPRLDDGRWHQ 90 (170)
T ss_dssp EEEEEGG--GCCCCEEEEEEEESCSSEEEEEEEEETTTEEEEEEEETTEEEEEEESSSCEEEE----ECSCCCCSSSCEE
T ss_pred EEEecCC--CCCceEEEEEEEeCCCCEEEEEecCCCCCCEEEEEEeCCEEEEEEECCCceEEE----eCCCccCCCCCEE
Confidence 4555432 22457999999999999999998753 79999999999999999998775444 4578899999999
Q ss_pred EEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeeccC
Q psy12396 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPL 346 (348)
Q Consensus 272 v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~ 346 (348)
|++.+.++.++|.||+.. ..... ... .+.. ..+||||+|... .........+|.||||++..+.+++
T Consensus 91 V~v~~~~~~~~L~VD~~~-~~~~~-~~~--~l~~-~~lylGG~p~~~---~~~~~~~~~~F~GCi~~l~in~~~~ 157 (170)
T 1d2s_A 91 VEVKMEGDSVLLEVDGEE-VLRLR-QVS--GHPI-MRIALGGLLFPA---SNLRLPLVPALDGCLRRDSWLDKQA 157 (170)
T ss_dssp EEEEEETTEEEEEETTEE-EEEET-TCC--CCCE-EEEEESSCSSCG---GGSSSCCCCCCCEEEEEEEESCGGG
T ss_pred EEEEEeCCEEEEEECCee-eeeec-cCC--Cccc-ccEEEECcccch---hhcccCCCCCeeeEeEEeEECCccc
Confidence 999999999999999987 32211 111 1222 689999999764 2122345689999999999877664
No 27
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=99.92 E-value=2.3e-24 Score=180.08 Aligned_cols=151 Identities=16% Similarity=0.196 Sum_probs=117.3
Q ss_pred cceEEecCCeeEEeeec-ccccceEEEEEEEEeCCCCeEEEEEcC--CCCeEEEEEECCEEEEEEECCCcceEEEEcCCC
Q psy12396 184 SGVFFYNSGGYVKGVEQ-FRVGREMELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPISAIYTPSD 260 (348)
Q Consensus 184 ~~~~f~~~~s~~~~~~~-~~~~~~~~i~~~frT~~~~Glll~~~~--~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s 260 (348)
....|. +.+|+.+..+ .......+|+|+|||++++|+|||..+ ..+|++|+|.+|+|+++++.+++...+ .+
T Consensus 6 ~~~~F~-G~sy~~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~~~d~l~L~L~~G~l~~~~~~G~~~~~~----~~ 80 (182)
T 2r16_A 6 TVLSYD-GSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLGKGPETL----FA 80 (182)
T ss_dssp CEEEEE-SSCCEEEEEEEEEEESEEEEEEEEECSCSSEEEEEEECSSSCCEEEEEEETTEEEEEEESSSCCEEE----EE
T ss_pred ccEEEC-CCceEEEECCCcCCccceEEEEEEEECCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEECCCCceEE----Ec
Confidence 456685 6799887532 233456899999999999999999874 489999999999999999999887665 35
Q ss_pred CeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCc
Q psy12396 261 PYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANC 340 (348)
Q Consensus 261 ~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~ 340 (348)
...+|||+||+|++.|.++.++|.||+.. ......+.....++.. .+|+||.|... .. .....+|.|||+++.
T Consensus 81 ~~~lnDg~WH~V~v~r~~~~~~L~VD~~~-~~~~~~~g~~~~l~~~-~l~iGG~~~~~---~~--~~~~~~F~GCi~~l~ 153 (182)
T 2r16_A 81 GYNLNDNEWHTVRVVRRGKSLKLTVDDQQ-AMTGQMAGDHTRLEFH-NIETGIITERR---YL--SSVPSNFIGHLQSLT 153 (182)
T ss_dssp CSSCCSSSCEEEEEEEETTEEEEEETTCC-EEEEECCSSCCCEEEE-EEEESSCCCCT---TC--SSCCCCCEEEEEEEE
T ss_pred CcccCCCCeEEEEEEEECCEEEEEECCce-eEeEECCCCccEEecc-CeEECCccccc---cc--CCCCCCCEEEEeEEE
Confidence 78899999999999999999999999987 3222223333445444 69999998753 11 123468999999999
Q ss_pred eeeccC
Q psy12396 341 KAVHPL 346 (348)
Q Consensus 341 ~~~~~~ 346 (348)
.+..|+
T Consensus 154 in~~~~ 159 (182)
T 2r16_A 154 FNGMAY 159 (182)
T ss_dssp ETTEEH
T ss_pred ECCEEh
Confidence 988774
No 28
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=99.90 E-value=2.4e-23 Score=177.38 Aligned_cols=145 Identities=13% Similarity=0.135 Sum_probs=106.6
Q ss_pred eeEEeeecccccceEEEEEEEEeCCCCeEEEEEcC--CCCeEEEEEECCEEEEEEECCCcceEEEEcCCCCeeecCCcEE
Q psy12396 193 GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWH 270 (348)
Q Consensus 193 s~~~~~~~~~~~~~~~i~~~frT~~~~Glll~~~~--~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH 270 (348)
+|+.++.. . ....+|+|+|||++++|+|||... ..+|++|+|.+|+|+++++.+.+...+ .+...+|||+||
T Consensus 28 ~y~~~~~~-~-~~~~~is~~frT~~~~GlLly~~~~~~~d~~~l~L~~G~l~~~~~~g~~~~~~----~s~~~vnDG~WH 101 (205)
T 1f5f_A 28 AVMTFDLT-K-ITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTV----GAGPRLDDGRWH 101 (205)
T ss_dssp EEEEEEGG-G-CCCCEEEEEEEESCSSEEEEEEEEETTTEEEEEEEETTEEEEEEESSSCEEEE----ECSCCCCSSSCE
T ss_pred EEEEECCC-C-CCceEEEEEEEeCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEECCCceEEE----ecCCccCCCCCE
Confidence 55555422 1 234799999999999999999875 369999999999999999998776544 467899999999
Q ss_pred EEEEEEeCCEEEEEEcCCCcccccCCCCC-CcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeeccC
Q psy12396 271 TIVAIKTKNVISVAVDSMTTDKPGLGPPG-SSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPL 346 (348)
Q Consensus 271 ~v~v~~~~~~~~l~vD~~~~~~~~~~~~~-~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~ 346 (348)
+|++.|.++.++|.||+...........+ .........+||||+|... .........+|+||||++.+.-+++
T Consensus 102 ~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~~~~~~~~lyiGG~p~~~---~~~~~~~~~~F~GCi~~l~i~~~~~ 175 (205)
T 1f5f_A 102 QVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPA---SNLRLPLVPALDGCLRRDSWLDKQA 175 (205)
T ss_dssp EEEEEEETTEEEEEETTEEEEEECSCCCCC----CCEEEEEESSCSSCG---GGSSSCCCCCCCEEEEEEECSCGGG
T ss_pred EEEEEEeCCEEEEEECCeeeeeeeccCCCcccccCCCceEEEeCccCcc---ccccccCCCCeeEEeeeeEECCeec
Confidence 99999999999999999873222111111 1122233689999999753 1122355689999999998655543
No 29
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=99.90 E-value=5.8e-23 Score=176.45 Aligned_cols=153 Identities=16% Similarity=0.186 Sum_probs=112.3
Q ss_pred cCCCCCccceEEecCCeeEEeeecc--c-ccceEEEEEEEEeCCCCeEEEEEc--C-CCCeEEEEEECCEEEEEEECCCc
Q psy12396 177 PCSDKTESGVFFYNSGGYVKGVEQF--R-VGREMELKMDVKPRNISGLLLSVH--S-KKDYFILQMIDGSVKATVDNGKG 250 (348)
Q Consensus 177 ~C~~~~~~~~~f~~~~s~~~~~~~~--~-~~~~~~i~~~frT~~~~Glll~~~--~-~~~~l~l~l~~G~l~~~~~~~~~ 250 (348)
.|..... ...|..+.+|+.|.... . .....+|+|.|||++++|+|||.. + ..+|++|+|.+|+|+++++.|++
T Consensus 5 ~c~~~~t-~~~F~~g~s~l~y~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~dfi~LeL~~G~l~~~~~~G~~ 83 (220)
T 2r1b_A 5 RGGHAGT-TYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTD 83 (220)
T ss_dssp -CCCCSS-EEEEEEEEEEEEEECCGGGCCCBSEEEEEEEEECCCSSEEEEEEEESTTCCCEEEEEEETTEEEEEEESSSS
T ss_pred ccCCCCc-eEEECCCCeEEEEECCCCCcccccCcEEEEEEEeCCCCEEEEEecCCCCCCCeEEEEEECCEEEEEEECCCC
Confidence 4654333 34576566898886432 1 223468999999999999999943 3 47999999999999999999988
Q ss_pred ceEEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCc--c--------------------------
Q psy12396 251 PISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS--E-------------------------- 302 (348)
Q Consensus 251 ~~~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~--~-------------------------- 302 (348)
...+. .....+|||+||+|++.|.++.++|.||+.. ........... .
T Consensus 84 ~~~~~---~~~~~vnDG~WH~V~v~r~~~~~~L~VD~~~-~~~~~~~g~~~~~~l~~~~~~ip~~~~~~~~~~~~~~~~~ 159 (220)
T 2r1b_A 84 DIAIE---ESNAIINDGKYHVVRFTRSGGNATLQVDSWP-VIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQ 159 (220)
T ss_dssp CEEEE---CTTCCCCSSSCEEEEEEEETTEEEEEETTSC-CEEECC-----------------CHHHHHHHHHHHHHHHG
T ss_pred ceEEE---eCceEecCCceEEEEEEEeCCEEEEEECCcc-eeeeccCCCccchheecccccccccccccccccccccccc
Confidence 77662 2346799999999999999999999999986 22211111110 1
Q ss_pred ---cCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeeccC
Q psy12396 303 ---TDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPL 346 (348)
Q Consensus 303 ---~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~ 346 (348)
++....+||||+|. ..+|.|||+++..+..++
T Consensus 160 ~~~~n~~~~l~lGG~p~------------~~~F~GCi~~l~ing~~v 194 (220)
T 2r1b_A 160 LTIFNSQATIIIGGKEQ------------GQPFQGQLSGLYYNGLKV 194 (220)
T ss_dssp GGSBCCEEEEEESSTTT------------TCCCCEEEEEEEETTBCH
T ss_pred ceEecCCCcEEECCccC------------CCCCEEEEeEEEECCChH
Confidence 22356899999983 368999999999887653
No 30
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=99.90 E-value=1.2e-22 Score=174.92 Aligned_cols=141 Identities=15% Similarity=0.145 Sum_probs=110.5
Q ss_pred cCCeeEEeeeccc---ccceEEEEEEEEeCCCCeEEEEEc--C-CCCeEEEEEECCEEEEEEECCCcceEEEEcCCCCee
Q psy12396 190 NSGGYVKGVEQFR---VGREMELKMDVKPRNISGLLLSVH--S-KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYF 263 (348)
Q Consensus 190 ~~~s~~~~~~~~~---~~~~~~i~~~frT~~~~Glll~~~--~-~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s~~~ 263 (348)
++ +|+.|..+.. .....+|+|.|||++++|+|||.. + ..+|++|+|.+|+|+++++.|++...+. .....
T Consensus 46 ~g-s~i~y~~~~~~~~~~~~~~isl~FrT~~~~GlLl~~~~~~~~~dfi~L~L~~G~l~~~~~~G~~~~~~~---~~~~~ 121 (226)
T 2r1d_A 46 GG-GQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIE---ESNAI 121 (226)
T ss_dssp EE-EEEEEECCGGGCCCBSEEEEEEEEECCCSSEEEEEEEECTTCCCEEEEEEETTEEEEEEESSSCEEEEE---CCSSC
T ss_pred CC-cEEEEECCccccccccccEEEEEEEeCCCCEEEEEecCCCCCCCEEEEEEECCEEEEEEECCCCcEEEE---eCCeE
Confidence 44 8888764331 223468999999999999999964 2 5899999999999999999998877662 23578
Q ss_pred ecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceee
Q psy12396 264 FCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAV 343 (348)
Q Consensus 264 ~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~ 343 (348)
+|||+||+|++.|.++.++|.||+.........+.....++....+||||+|.. .+|.|||+++..+.
T Consensus 122 vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~~------------~~F~GCi~~v~ing 189 (226)
T 2r1d_A 122 INDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQG------------QPFQGQLSGLYYNG 189 (226)
T ss_dssp CCSSSCEEEEEEEETTEEEEEETTSCCEEECCSSCCCCCBCSEEEEEESSTTTT------------CCCCEEEEEEEETT
T ss_pred ecCCCCEEEEEEEeCCEEEEEEcCccceEEecCCCcceeccCCCeEEEccccCC------------CCCeEEEeeEEECC
Confidence 999999999999999999999999762222122233445667778999999852 68999999999887
Q ss_pred ccC
Q psy12396 344 HPL 346 (348)
Q Consensus 344 ~~~ 346 (348)
.++
T Consensus 190 ~~v 192 (226)
T 2r1d_A 190 LKV 192 (226)
T ss_dssp BCH
T ss_pred EeH
Confidence 653
No 31
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=99.89 E-value=4.3e-22 Score=185.92 Aligned_cols=157 Identities=20% Similarity=0.252 Sum_probs=122.6
Q ss_pred cceEEec-CCeeEEeee-cccccceEEEEEEEEeCCCCeEEEEEcC--CCCeEEEEEECCEEEEEEECCCcceEEEEcCC
Q psy12396 184 SGVFFYN-SGGYVKGVE-QFRVGREMELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPISAIYTPS 259 (348)
Q Consensus 184 ~~~~f~~-~~s~~~~~~-~~~~~~~~~i~~~frT~~~~Glll~~~~--~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~ 259 (348)
....|.. +.||+.++. ........+|+|.|||++++|+|||..+ ..+|++|+|.+|+|+++++.|++...+ .
T Consensus 20 ~a~~Fg~~~~S~~~~~~~~~~~~~~~~is~~frT~~~~GlLly~~~~~~~d~~~l~L~~G~l~~~~~~g~~~~~~----~ 95 (383)
T 2jd4_A 20 GAHQFGLSQNSHLVLPLQQSDVRKRLQVQLSIRTFASSGLIYYVAHQNQMDYATLQLQEGRLHFMFDLGKGRTKV----S 95 (383)
T ss_dssp TCEECCSSTTCEEEEECCSCCCSSEEEEEEEEEECCSCEEEEEEECTTSSSEEEEEEETTEEEEEEECSSCEEEE----E
T ss_pred cccccCCCCCeeEEEeCCchhcccceEEEEEEEcCCCCeEEEEeCCCCCCcEEEEEEECCEEEEEEECCCCeEEE----e
Confidence 3456752 479999874 3344567899999999999999999864 379999999999999999999887666 3
Q ss_pred CCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecC
Q psy12396 260 DPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINAN 339 (348)
Q Consensus 260 s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~ 339 (348)
+...++||+||+|++.|.++.++|.||+.. ......+.....++....+||||.|.... .........+|+|||+++
T Consensus 96 ~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~-~~~~~~~g~~~~l~~~~~l~vGG~p~~~~--~~~~~~~~~~F~GCi~~l 172 (383)
T 2jd4_A 96 HPALLSDGKWHTVKTEYIKRKAFMTVDGQE-SPSVTVVGKATTLDVERKLYLGGLPSHYR--ARNIGTITHSIPACIGEI 172 (383)
T ss_dssp CCCCCTTSSCEEEEEEEETTEEEEEETTEE-CCCEECCSSCCCCCCCSEEEESSCCTTCC--CCSSCSCCSBCCEEEEEE
T ss_pred CcceecCCCcEEEEEEEeCCEEEEEEcCcc-ccceecCCCcceecCCCCeEEeccCcccc--cccccccCCCceEEeEEE
Confidence 567899999999999999999999999987 33322233445567778999999997631 111223457999999999
Q ss_pred ceeeccCC
Q psy12396 340 CKAVHPLT 347 (348)
Q Consensus 340 ~~~~~~~~ 347 (348)
..+.++++
T Consensus 173 ~in~~~l~ 180 (383)
T 2jd4_A 173 MVNGQQLD 180 (383)
T ss_dssp EETTEECC
T ss_pred EECCEEec
Confidence 98887764
No 32
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=99.89 E-value=2.7e-22 Score=188.84 Aligned_cols=160 Identities=18% Similarity=0.249 Sum_probs=122.9
Q ss_pred CccceEEecCCeeEEeeecccccceEEEEEEEEeCCCCeEEEEEcC-CCCeEEEEEECCEEEEEEECCCcceEEEEcCCC
Q psy12396 182 TESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHS-KKDYFILQMIDGSVKATVDNGKGPISAIYTPSD 260 (348)
Q Consensus 182 ~~~~~~f~~~~s~~~~~~~~~~~~~~~i~~~frT~~~~Glll~~~~-~~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s 260 (348)
+..+++|..+.||+.++. +......+|+|.|||++++|+|||..+ ..+|++|+|.+|+|+++++.|++...+ ...+
T Consensus 4 i~~~v~F~~~~Syl~~p~-~~~~~~~~is~~frT~~~~GlLly~~~~~~dfi~l~L~~G~l~~~~~~G~g~~~~--~~~s 80 (410)
T 3asi_A 4 IADPVTFKTKSSYVALAT-LQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLI--KGSS 80 (410)
T ss_dssp -CCCEEECSTTCEEEESC-CCCSSCEEEEEEEECSCSCEEEEEEEBSTTCEEEEEEETTEEEEEEESSSCEEEE--ECCC
T ss_pred cccccEeCCCCeeEEeCC-CCCCceEEEEEEEEeCCCCeEEEEeCCCCCCEEEEEEECCEEEEEEECCCCcEEE--Eecc
Confidence 346778976789999863 334457899999999999999999765 489999999999999999999887665 2346
Q ss_pred CeeecCCcEEEEEEEEeCC-EEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecC
Q psy12396 261 PYFFCDGQWHTIVAIKTKN-VISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINAN 339 (348)
Q Consensus 261 ~~~~~dg~wH~v~v~~~~~-~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~ 339 (348)
...++||+||+|++.|.++ .+.|.||+.. ..... .....++....+||||.|.......+.......+|+||||++
T Consensus 81 ~~~vnDg~WH~V~v~r~~~~~~~l~VD~~~-~~~~~--~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~l 157 (410)
T 3asi_A 81 NKPLNDNQWHNVMISRDTSNLHTVKIDTKI-TTQIT--AGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASV 157 (410)
T ss_dssp SSCSCSSSCEEEEEEECTTCEEEEEETTEE-EEEEC--TTCCCCCBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEE
T ss_pred CcEeCCCCeEEEEEEEcCCceEEEEECCEe-ceecc--CCccceecCCceEECccccchhhhhhhhcccccCchhheehe
Confidence 7899999999999999986 4789999976 32221 123456677899999999753222222334567899999999
Q ss_pred ceeeccCC
Q psy12396 340 CKAVHPLT 347 (348)
Q Consensus 340 ~~~~~~~~ 347 (348)
..+.++++
T Consensus 158 ~ing~~~d 165 (410)
T 3asi_A 158 DLNGRLPD 165 (410)
T ss_dssp ESSSCCCC
T ss_pred eeCCcccC
Confidence 98877653
No 33
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=99.88 E-value=6.9e-22 Score=185.10 Aligned_cols=163 Identities=20% Similarity=0.278 Sum_probs=124.1
Q ss_pred cCCCCCc-----cceEEec-CCeeEEeee-cccccceEEEEEEEEeCCCCeEEEEEcC--CCCeEEEEEECCEEEEEEEC
Q psy12396 177 PCSDKTE-----SGVFFYN-SGGYVKGVE-QFRVGREMELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDN 247 (348)
Q Consensus 177 ~C~~~~~-----~~~~f~~-~~s~~~~~~-~~~~~~~~~i~~~frT~~~~Glll~~~~--~~~~l~l~l~~G~l~~~~~~ 247 (348)
+|..... .+..|.. ..+|+.+.. ........+|+|.|||++++|+|||..+ ..+|++|+|.+|+|+++++.
T Consensus 22 ~C~~~~~~~~~~~a~~Fg~~~~s~~~~~~~~~~~~~~~~is~~frT~~~~GlLly~~~~~~~dfi~l~L~~G~l~~~~~~ 101 (394)
T 1dyk_A 22 PCVAESEPALLTGSKQFGLSRNSHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMARINHADFATVQLRNGFPYFSYDL 101 (394)
T ss_dssp SSCCCCCCCBCTTCEECCSSTTCEEEEECCGGGGSSEEEEEEEEEECCSCEEEEEEECTTSSSEEEEEEETTEEEEEEES
T ss_pred ccCCCccccccccceecCCCCCcEEEEEcCccccccceEEEEEEEeCCCCeEEEEcCCCCCCceEEEEEECCEEEEEEEC
Confidence 4765432 3445543 358877753 3344567899999999999999999875 47999999999999999999
Q ss_pred CCcceEEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCc
Q psy12396 248 GKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPR 327 (348)
Q Consensus 248 ~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~ 327 (348)
|++...+ .+...++||+||+|++.|.++.++|.||+.. ..... +.....++....+||||+|..... .....
T Consensus 102 g~g~~~~----~~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~-~~~~~-~g~~~~l~~~~~l~vGG~p~~~~~--~~~~~ 173 (394)
T 1dyk_A 102 GSGDTST----MIPTKINDGQWHKIKIVRVKQEGILYVDDAS-SQTIS-PKKADILDVVGILYVGGLPINYTT--RRIGP 173 (394)
T ss_dssp SSCEEEE----ECCSCCCSSSCEEEEEEEETTEEEEEETTEE-EEEEC-STTCCCCCCCSEEEESSCCTTCCC--CSSCS
T ss_pred CCCceEE----EcccccCCCCEEEEEEEEeCCEEEEEEcCcc-cceec-CCCCceecCCCCEEEcccCCcccc--ccccc
Confidence 9887666 3467899999999999999999999999977 32222 334455677789999999976411 11123
Q ss_pred cccceeeeeecCceeeccCC
Q psy12396 328 TKRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 328 ~~~~F~GCi~~~~~~~~~~~ 347 (348)
...+|.|||+++..+.++++
T Consensus 174 ~~~~F~GCi~~l~in~~~~~ 193 (394)
T 1dyk_A 174 VTYSLDGCVRNLHMEQAPVD 193 (394)
T ss_dssp CCSBCSEEEEEEEESSSCCC
T ss_pred CCCCccEeeeEEEECCEEec
Confidence 45789999999999988764
No 34
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=99.87 E-value=7.6e-22 Score=186.36 Aligned_cols=152 Identities=13% Similarity=0.099 Sum_probs=111.3
Q ss_pred ceEEecCCeeEEeeecccccceEEEEEEEEeCCCCeEEEEEcCC--CCeEEEEEECCEEEEEEECCCcceEEEEcCCCCe
Q psy12396 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDNGKGPISAIYTPSDPY 262 (348)
Q Consensus 185 ~~~f~~~~s~~~~~~~~~~~~~~~i~~~frT~~~~Glll~~~~~--~~~l~l~l~~G~l~~~~~~~~~~~~~~~~~~s~~ 262 (348)
+..|. +.+|+.+..........+|+|+|||++++|+|||..+. .+|++|+|.+|+|+++++.+++...+ .+..
T Consensus 42 ~~~F~-g~~~~~~~f~~~~~~~~~is~~FrT~~~~GlLly~~~~~~~df~~l~L~~G~l~~~~~~g~~~~~~----~~~~ 116 (422)
T 1h30_A 42 GRMFS-GTPVIRLRFKRLQPTRLVAEFDFRTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVT----SSGP 116 (422)
T ss_dssp CC------CCEEEECCBSSCCCCEEEEEEEECCSSEEEEEEESCTTSEEEEEEEETTEEEEEEEETTEEEEE----EEEE
T ss_pred eeEEC-CCceEEEEccCCCCCceEEEEEEEeCCCCeEEEEECCCCCCcEEEEEEECCEEEEEEECCCCcEEE----ecCc
Confidence 45674 56777775332335568999999999999999998863 79999999999999999999876444 3578
Q ss_pred eecCCcEEEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccC---CCCceEEcccCCCCCCCCCCCCccccceeeeeecC
Q psy12396 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD---TNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINAN 339 (348)
Q Consensus 263 ~~~dg~wH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~---~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~ 339 (348)
.++||+||+|++.|.++.++|.||+.. ......+.....++ ....+||||.|... .........+|.|||+++
T Consensus 117 ~~nDg~WH~V~v~r~~~~~~L~VD~~~-~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~---~~~~~~~~~~F~GCi~~v 192 (422)
T 1h30_A 117 VINHGMWQTISVEELARNLVIKVNRDA-VMKIAVAGDLFQPERGLYHLNLTVGGIPFHE---KDLVQPINPRLDGCMRSW 192 (422)
T ss_dssp ECCSSCCEEEEEEECSSEEEEEETTEE-EEEEECCSCSSEEETTEEECEEEESSCSSCG---GGSSSCCCCCCCEEEEEE
T ss_pred eecCCCCEEEEEEEcCCEEEEEECCee-eEEeecCCcccccccccccceEEEecCcccc---cccccccCCCCeEEEEEe
Confidence 999999999999999999999999987 33222233344444 45789999999874 222234567899999999
Q ss_pred ce-eecc
Q psy12396 340 CK-AVHP 345 (348)
Q Consensus 340 ~~-~~~~ 345 (348)
.. +.++
T Consensus 193 ~i~~~~~ 199 (422)
T 1h30_A 193 NWLNGED 199 (422)
T ss_dssp EEC----
T ss_pred EECCccc
Confidence 87 4433
No 35
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=98.52 E-value=8.2e-06 Score=69.22 Aligned_cols=160 Identities=14% Similarity=0.126 Sum_probs=97.6
Q ss_pred eeEeCCCC-eeeEEecCC-cCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEEeC---cEEEEEEEcCCCCcee
Q psy12396 4 YVIAGTSK-SSRIEYPTI-TGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKD---GQIHYSFNCGSGPMAL 78 (348)
Q Consensus 4 ~~~F~g~~-~sy~~~~~~-~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L~~---G~l~~~~~~g~~~~~~ 78 (348)
+..|-.+. .+|+++++. ....-..+++++++|+....++.||-.......+-+.|...+ |...+.+..++.....
T Consensus 8 ~~~Fp~~s~~~yv~l~~~~~~p~l~~fTvc~wv~~~~~~~~~lfSy~~~~~~n~l~l~~~~~~~g~~~~~l~i~g~~~~~ 87 (217)
T 3flp_A 8 KISFPGTQNPKFPHLRFMQTLPAVRQLTVCQRIKPFHRNTGYIFSCATSNQDNQFITSMYVKSDGTLNLGLQVNASSNKY 87 (217)
T ss_dssp EEEECCCBTTBCCEEEESSCBCCBSEEEEEEEEEESCSSCEEEEEEEETTEEEEEEEEEEECTTSEEEEEEEETTCCCEE
T ss_pred EEEcCCCCCCCEEEEecCCCCCCCccEEEEEEEEecCCCCeeEEEEECCCCCceEEEEEeCCCCcceEEEEEECCcccee
Confidence 45666543 789999641 111247899999999443267777754443233455665553 3334444443331234
Q ss_pred ecCceeecCCCcEEEEEEEeC--cEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeee
Q psy12396 79 SSGDKLILDGEWHTVEFSRQQ--LSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCL 156 (348)
Q Consensus 79 ~~~~~~~~dg~Wh~v~v~~~~--~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi 156 (348)
+..+..+++|+||+|.++... +.+.|.||+....+.........+.....+.||.-..... ........|.|.|
T Consensus 88 ~~~~~~~~~g~W~Hv~~t~d~~~G~~~lYvdG~~~~~~~~~~~g~~i~~~g~l~lG~~~~~~g----g~f~~~~~f~G~i 163 (217)
T 3flp_A 88 ISCPIEIELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKGHQISAGGTVVIGQEQDKIG----GGFEEQESWSGEL 163 (217)
T ss_dssp EEEEEECCTTSCEEEEEEEETTTTEEEEEETTEEEEEESCSSTTCCBCSCBEEEESSCCSBTT----BCCCGGGCCCEEE
T ss_pred EEcccccCCCCEEEEEEEEECCCCEEEEEECCEEecceeccccCcEECCCCEEEeCCcccCCC----CccCCCCceEEEE
Confidence 555678999999999999986 6889999998854322221222233445688887443210 0011246799999
Q ss_pred eceEECCEEcC
Q psy12396 157 RNLKSNNKLVQ 167 (348)
Q Consensus 157 ~~l~in~~~~~ 167 (348)
.++.+=++.+.
T Consensus 164 ~~v~iw~~aLs 174 (217)
T 3flp_A 164 SDLQVWDEALT 174 (217)
T ss_dssp EEEEEESSCCC
T ss_pred eeEEEECccCC
Confidence 99999766663
No 36
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=98.46 E-value=4.9e-06 Score=70.61 Aligned_cols=146 Identities=14% Similarity=0.102 Sum_probs=92.4
Q ss_pred CeeEEeee--cccccceEEEEEEEEeCC-CCeEEEEEcCC--CCeEEEEEE-CCE----EEEEEECCCcceEEEEcCCCC
Q psy12396 192 GGYVKGVE--QFRVGREMELKMDVKPRN-ISGLLLSVHSK--KDYFILQMI-DGS----VKATVDNGKGPISAIYTPSDP 261 (348)
Q Consensus 192 ~s~~~~~~--~~~~~~~~~i~~~frT~~-~~Glll~~~~~--~~~l~l~l~-~G~----l~~~~~~~~~~~~~~~~~~s~ 261 (348)
.+|+.+.+ .......+++.+.+|+.. ..+.||..... .+.+.|... ++. +.+.++ +...... ...
T Consensus 17 ~~yv~l~~~~~~p~l~~fTvc~wv~~~~~~~~~lfSy~~~~~~n~l~l~~~~~~~g~~~~~l~i~-g~~~~~~----~~~ 91 (217)
T 3flp_A 17 PKFPHLRFMQTLPAVRQLTVCQRIKPFHRNTGYIFSCATSNQDNQFITSMYVKSDGTLNLGLQVN-ASSNKYI----SCP 91 (217)
T ss_dssp TBCCEEEESSCBCCBSEEEEEEEEEESCSSCEEEEEEEETTEEEEEEEEEEECTTSEEEEEEEET-TCCCEEE----EEE
T ss_pred CCEEEEecCCCCCCCccEEEEEEEEecCCCCeeEEEEECCCCCceEEEEEeCCCCcceEEEEEEC-CccceeE----Ecc
Confidence 57888765 333356799999999553 45666644332 456666665 333 454443 2222222 124
Q ss_pred eeecCCcEEEEEEEEeC--CEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecC
Q psy12396 262 YFFCDGQWHTIVAIKTK--NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINAN 339 (348)
Q Consensus 262 ~~~~dg~wH~v~v~~~~--~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~ 339 (348)
..+.||+||+|.+..+. +.++|+|||.. ............+.....+.||...+.. ..+......|.|.|.++
T Consensus 92 ~~~~~g~W~Hv~~t~d~~~G~~~lYvdG~~-~~~~~~~~~g~~i~~~g~l~lG~~~~~~----gg~f~~~~~f~G~i~~v 166 (217)
T 3flp_A 92 IEIELGQWYHVCHVWSGVDGRMAVYANGSP-CGTMENVGKGHQISAGGTVVIGQEQDKI----GGGFEEQESWSGELSDL 166 (217)
T ss_dssp EECCTTSCEEEEEEEETTTTEEEEEETTEE-EEEESCSSTTCCBCSCBEEEESSCCSBT----TBCCCGGGCCCEEEEEE
T ss_pred cccCCCCEEEEEEEEECCCCEEEEEECCEE-ecceeccccCcEECCCCEEEeCCcccCC----CCccCCCCceEEEEeeE
Confidence 57999999999999986 58999999988 3221111222234556788998755431 11233457899999999
Q ss_pred ceeeccCC
Q psy12396 340 CKAVHPLT 347 (348)
Q Consensus 340 ~~~~~~~~ 347 (348)
...-++|+
T Consensus 167 ~iw~~aLs 174 (217)
T 3flp_A 167 QVWDEALT 174 (217)
T ss_dssp EEESSCCC
T ss_pred EEECccCC
Confidence 99888775
No 37
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=98.45 E-value=2.8e-05 Score=65.19 Aligned_cols=154 Identities=10% Similarity=0.064 Sum_probs=95.8
Q ss_pred eeEeCCCC-eeeEEecCCcCcccceEEEEEEEEcCCCCCeEEEEEecCCCCcEEEEEE-eCcEEEEEEEcCCCCceeecC
Q psy12396 4 YVIAGTSK-SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDGQIHYSFNCGSGPMALSSG 81 (348)
Q Consensus 4 ~~~F~g~~-~sy~~~~~~~~~~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l~l~L-~~G~l~~~~~~g~~~~~~~~~ 81 (348)
+..|-.+. .+|+++.+.-...-..++++++++|.....+.||.-.......-+.|.. .+|.+.+.+ ++. ...+.
T Consensus 8 ~l~Fp~~s~~~yv~l~~~~~~~l~~fTvc~wv~~~~~~~~tlfSy~~~~~~nel~l~~~~~~~~~l~i--~g~-~~~~~- 83 (204)
T 3kqr_A 8 VFVFPRESVTDHVNLITPLEKPLQNFTLCFRAYSDLSRAYSLFSYNTQGRDNELLVYKERVGEYSLYI--GRH-KVTSK- 83 (204)
T ss_dssp EEEECSCCSSCEEEEECCCCSCBSEEEEEEEEECCCCSCEEEEEEEETTEEEEEEEEEEETTEEEEEE--TTE-EEEEE-
T ss_pred EEEcCCCCCCCEEEEeCCCCCCcCCEEEEEEEEeCCCCCeEEEEEECCCCCceEEEEEcCCCeEEEEE--CCe-EEEEe-
Confidence 45677653 6999996522222578999999998762456666544432222344444 457776665 322 33333
Q ss_pred ceeecCCCcEEEEEEEeC--cEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeeece
Q psy12396 82 DKLILDGEWHTVEFSRQQ--LSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNL 159 (348)
Q Consensus 82 ~~~~~dg~Wh~v~v~~~~--~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l 159 (348)
..+++|+||+|.++... +.+.|.||+....... ......+.....+.||.-....-. .......|.|.|.++
T Consensus 84 -~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~~~-~~~g~~i~~~g~l~lGq~qd~~gg----~f~~~~~f~G~i~~v 157 (204)
T 3kqr_A 84 -VIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKG-LRQGYFVEAQPKIVLGQEQDSYGG----KFDRSQSFVGEIGDL 157 (204)
T ss_dssp -CCCCSSCCEEEEEEEETTTCEEEEEETTEECCCEE-CCTTCCBCSSCEEEESSCCSSSSC----CCCGGGCCCEEEEEE
T ss_pred -cccCCCceEEEEEEEECCCCeEEEEECCEEeeeec-cCCCCEECCCcEEEEcccccCCCC----CcCcccceeEEEeeE
Confidence 57899999999999985 5889999998744321 111122344456788865432110 111346799999999
Q ss_pred EECCEEcC
Q psy12396 160 KSNNKLVQ 167 (348)
Q Consensus 160 ~in~~~~~ 167 (348)
.+=++.+.
T Consensus 158 ~iW~~aLs 165 (204)
T 3kqr_A 158 YMWDSVLP 165 (204)
T ss_dssp EEESSCCC
T ss_pred EEECccCC
Confidence 99766663
No 38
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=98.44 E-value=3.5e-06 Score=68.69 Aligned_cols=132 Identities=15% Similarity=0.046 Sum_probs=90.9
Q ss_pred ceEEEEEEEEeCCCCeE-EEEEcC---CCCeEEEEEECCEEEEEEECCCcc-eEEEEcCCCCeeecCCcEEEEEEEEeC-
Q psy12396 205 REMELKMDVKPRNISGL-LLSVHS---KKDYFILQMIDGSVKATVDNGKGP-ISAIYTPSDPYFFCDGQWHTIVAIKTK- 278 (348)
Q Consensus 205 ~~~~i~~~frT~~~~Gl-ll~~~~---~~~~l~l~l~~G~l~~~~~~~~~~-~~~~~~~~s~~~~~dg~wH~v~v~~~~- 278 (348)
.+..|.++||+...... ||...+ ...|+.|+|.+|.+.+.+....+. ...... ...... +++||+|.+..++
T Consensus 40 ~~gTI~v~fks~~~~~q~LfSIsN~k~~n~yf~lyi~~g~lg~e~R~~~~~~~~~~~~-~a~v~~-~~~wntvaf~~d~~ 117 (191)
T 2v73_A 40 EEGTIVTRFNMNDTSIQSLIGLSDGNKANNYFSLYVSGGKVGYELRRQEGNGDFNVHH-SADVTF-NRGINTLALKIEKG 117 (191)
T ss_dssp SSEEEEEEEEECCCSCEEEEEEECTTCSSCEEEEEECSSEEEEEEEECTTSSCEEEEE-EEECCC-CSSCEEEEEEEETT
T ss_pred CCcEEEEEEecCCCcceEEEEccCCCCccceEEEEEeCCEEEEEEecCCCceeeeeec-ccceec-CCceEEEEEEEcCC
Confidence 45789999999983333 444443 378999999999999988764432 111111 112233 3599999999987
Q ss_pred CEEEEEEcCCCccccc-CCCCC-CcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeeccCC
Q psy12396 279 NVISVAVDSMTTDKPG-LGPPG-SSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 279 ~~~~l~vD~~~~~~~~-~~~~~-~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~~ 347 (348)
..++|++||+. +... ..... ...+ ....+.||+..... ..+.-+|.|-|+++..+-+||+
T Consensus 118 ~~~~ly~NG~~-V~t~~~~~~~fi~~i-~ln~~~IG~~~r~s-------g~~~y~F~G~Id~~~iYn~aLs 179 (191)
T 2v73_A 118 IGAKIFLNGSL-VKTVSDPNIKFLNAI-NLNSGFIGKTDRAN-------GYNEYLFRGNIDFMNIYDKPVS 179 (191)
T ss_dssp TEEEEEETTEE-EEEEECTTCCCGGGS-CCCEEEESSCCCCS-------SSCCCCCCEEEEEEEEESSCCC
T ss_pred ccEEEEECCEE-EEEEecccccceeec-CCceEEEcceeecC-------CceeeccCCeEEEEEEEcCcCC
Confidence 59999999988 4332 21112 2223 55689999988752 1345689999999999999986
No 39
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=98.43 E-value=1.8e-05 Score=64.49 Aligned_cols=134 Identities=14% Similarity=0.215 Sum_probs=93.8
Q ss_pred cceEEEEEEEEcCCCCCe-EEEEEecC-CCCcEEEEEEeCcEEEEEEEcCCCCce-e-ecCceeecCCCcEEEEEEEeC-
Q psy12396 25 KNKFDFSIDIKTTSEQDG-IIFYVADV-KHIDYVALYVKDGQIHYSFNCGSGPMA-L-SSGDKLILDGEWHTVEFSRQQ- 99 (348)
Q Consensus 25 ~~~~~i~~~FrT~~~~~G-lLl~~~~~-~~~~~l~l~L~~G~l~~~~~~g~~~~~-~-~~~~~~~~dg~Wh~v~v~~~~- 99 (348)
-...+|.|+||+.. +.. -||-..+. ....|+.|.|.+|.+.+.+....+... . ..+.....+++||+|.+....
T Consensus 39 L~~gTI~v~fks~~-~~~q~LfSIsN~k~~n~yf~lyi~~g~lg~e~R~~~~~~~~~~~~~a~v~~~~~wntvaf~~d~~ 117 (191)
T 2v73_A 39 LEEGTIVTRFNMND-TSIQSLIGLSDGNKANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVTFNRGINTLALKIEKG 117 (191)
T ss_dssp CSSEEEEEEEEECC-CSCEEEEEEECTTCSSCEEEEEECSSEEEEEEEECTTSSCEEEEEEEECCCCSSCEEEEEEEETT
T ss_pred cCCcEEEEEEecCC-CcceEEEEccCCCCccceEEEEEeCCEEEEEEecCCCceeeeeecccceecCCceEEEEEEEcCC
Confidence 36788999999999 653 44544443 345899999999999999988544222 1 223333344599999999886
Q ss_pred cEEEEEECCeeeeeeeecC--CCccccccCCeEEeccCCCCcceeccCccccccceeeeeceEECCEEcC
Q psy12396 100 LSGKLKIDGQVVAEGESKG--SSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167 (348)
Q Consensus 100 ~~~~l~vd~~~~~~~~~~~--~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in~~~~~ 167 (348)
..++|.+|+..+.+...+. ....+++ ..+.|||...... ...-+|.|-|+++.+-++++.
T Consensus 118 ~~~~ly~NG~~V~t~~~~~~~fi~~i~l-n~~~IG~~~r~sg-------~~~y~F~G~Id~~~iYn~aLs 179 (191)
T 2v73_A 118 IGAKIFLNGSLVKTVSDPNIKFLNAINL-NSGFIGKTDRANG-------YNEYLFRGNIDFMNIYDKPVS 179 (191)
T ss_dssp TEEEEEETTEEEEEEECTTCCCGGGSCC-CEEEESSCCCCSS-------SCCCCCCEEEEEEEEESSCCC
T ss_pred ccEEEEECCEEEEEEecccccceeecCC-ceEEEcceeecCC-------ceeeccCCeEEEEEEEcCcCC
Confidence 6999999999876654442 2333433 4799999776421 023569999999999877764
No 40
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=98.41 E-value=1.5e-05 Score=66.84 Aligned_cols=142 Identities=10% Similarity=-0.019 Sum_probs=94.3
Q ss_pred CeeEEeeeccc-ccceEEEEEEEEeCC-CCeEEEEEcCC--CCeEEEEE-ECCEEEEEEECCCcceEEEEcCCCCeeecC
Q psy12396 192 GGYVKGVEQFR-VGREMELKMDVKPRN-ISGLLLSVHSK--KDYFILQM-IDGSVKATVDNGKGPISAIYTPSDPYFFCD 266 (348)
Q Consensus 192 ~s~~~~~~~~~-~~~~~~i~~~frT~~-~~Glll~~~~~--~~~l~l~l-~~G~l~~~~~~~~~~~~~~~~~~s~~~~~d 266 (348)
.+|+.+.+... ....+++.+.+||.. ..+.||..... .+-+.|.. .+|.+.+.+ ++....+ ..++.|
T Consensus 17 ~~yv~l~~~~~~~l~~fTvc~wv~~~~~~~~tlfSy~~~~~~nel~l~~~~~~~~~l~i--~g~~~~~------~~~~~~ 88 (204)
T 3kqr_A 17 TDHVNLITPLEKPLQNFTLCFRAYSDLSRAYSLFSYNTQGRDNELLVYKERVGEYSLYI--GRHKVTS------KVIEKF 88 (204)
T ss_dssp SCEEEEECCCCSCBSEEEEEEEEECCCCSCEEEEEEEETTEEEEEEEEEEETTEEEEEE--TTEEEEE------ECCCCS
T ss_pred CCEEEEeCCCCCCcCCEEEEEEEEeCCCCCeEEEEEECCCCCceEEEEEcCCCeEEEEE--CCeEEEE------ecccCC
Confidence 47888875533 356799999999875 45666655432 33455555 457777766 3333222 246899
Q ss_pred CcEEEEEEEEeC--CEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeec
Q psy12396 267 GQWHTIVAIKTK--NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVH 344 (348)
Q Consensus 267 g~wH~v~v~~~~--~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~ 344 (348)
|+||+|.+..+. +.++|+|||........ .....+.....+.||...+.. ..+....+.|.|-|.++...-+
T Consensus 89 g~W~Hv~~twd~~~G~~~lyvdG~~~~~~~~--~~g~~i~~~g~l~lGq~qd~~----gg~f~~~~~f~G~i~~v~iW~~ 162 (204)
T 3kqr_A 89 PAPVHICVSWESSSGIAEFWINGTPLVKKGL--RQGYFVEAQPKIVLGQEQDSY----GGKFDRSQSFVGEIGDLYMWDS 162 (204)
T ss_dssp SCCEEEEEEEETTTCEEEEEETTEECCCEEC--CTTCCBCSSCEEEESSCCSSS----SCCCCGGGCCCEEEEEEEEESS
T ss_pred CceEEEEEEEECCCCeEEEEECCEEeeeecc--CCCCEECCCcEEEEcccccCC----CCCcCcccceeEEEeeEEEECc
Confidence 999999999885 58999999987322222 122234556788998765542 2234456789999999998887
Q ss_pred cCC
Q psy12396 345 PLT 347 (348)
Q Consensus 345 ~~~ 347 (348)
+|+
T Consensus 163 aLs 165 (204)
T 3kqr_A 163 VLP 165 (204)
T ss_dssp CCC
T ss_pred cCC
Confidence 775
No 41
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=98.40 E-value=2.4e-05 Score=65.75 Aligned_cols=155 Identities=13% Similarity=0.080 Sum_probs=97.2
Q ss_pred eeeEeCCCC-eeeEEecCCcCcccceEEEEEEEEcCCC--CCeEEEEEecCCCCcEEEEEEe-CcEEEEEEEcCCCCcee
Q psy12396 3 YYVIAGTSK-SSRIEYPTITGRFKNKFDFSIDIKTTSE--QDGIIFYVADVKHIDYVALYVK-DGQIHYSFNCGSGPMAL 78 (348)
Q Consensus 3 ~~~~F~g~~-~sy~~~~~~~~~~~~~~~i~~~FrT~~~--~~GlLl~~~~~~~~~~l~l~L~-~G~l~~~~~~g~~~~~~ 78 (348)
.+..|..+. .+|+++.+.-...-..++++++++|... .++.||.-.......-+.|... +|.+.+.+ ++. ...
T Consensus 7 k~l~Fp~~s~~~yv~l~~~~~~~l~~fTvc~wv~~~~~~~~~~~lfSy~~~~~~n~l~l~~~~~g~~~l~i--~g~-~~~ 83 (206)
T 3pvn_A 7 KAFVFPKESDTSYVSLKAPLTKPLKAFTVCLHFYTELSSTRGYSIFSYATKRQDNEILIFWSKDIGYSFTV--GGS-EIL 83 (206)
T ss_dssp EEEEECSCCSSCEEEECCCCCSCBSEEEEEEEEEESGGGTCCEEEEEEEETTEEEEEEEEEETTTEEEEEE--TTE-EEE
T ss_pred CEEEcCCCCCCCEEEEecCCCCCcCCEEEEEEEEecCCCCCcEEEEEEEcCCCCCEEEEEEcCCCeEEEEE--CCe-EEE
Confidence 356787754 6999996522222578999999999871 3667765544323334555554 57776665 322 333
Q ss_pred ecCceeecCCCcEEEEEEEeC--cEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeee
Q psy12396 79 SSGDKLILDGEWHTVEFSRQQ--LSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCL 156 (348)
Q Consensus 79 ~~~~~~~~dg~Wh~v~v~~~~--~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi 156 (348)
+. ..+++|+||+|.++... +.+.|.+|+....... ......+.....+.||.-..... ........|.|.|
T Consensus 84 ~~--~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~~~-~~~g~~i~~~g~l~lGq~qd~~g----g~f~~~~~f~G~i 156 (206)
T 3pvn_A 84 FE--VPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKS-LKKGYTVGAEASIILGQEQDSFG----GNFEGSQSLVGDI 156 (206)
T ss_dssp EE--CSSCCSSCEEEEEEEETTTCEEEEEETTEECCCEE-CCTTCCBCSSCEEEESSCCSBTT----BCCCGGGCCCEEE
T ss_pred Ee--ccCCCCceEEEEEEEECCCCeEEEEECCEEccccc-ccCCcEECCCCEEEEccccccCC----CCcCCccceEEEE
Confidence 32 56799999999999986 5889999998744321 11112234456688875432111 0111346799999
Q ss_pred eceEECCEEcC
Q psy12396 157 RNLKSNNKLVQ 167 (348)
Q Consensus 157 ~~l~in~~~~~ 167 (348)
.++.+=++.+.
T Consensus 157 ~~v~iw~~aLs 167 (206)
T 3pvn_A 157 GNVNMWDFVLS 167 (206)
T ss_dssp EEEEEESSCCC
T ss_pred eeEEEECccCC
Confidence 99999766653
No 42
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=98.38 E-value=1.9e-05 Score=66.32 Aligned_cols=147 Identities=12% Similarity=-0.002 Sum_probs=96.1
Q ss_pred EEecC--CeeEEeeeccc-ccceEEEEEEEEeCC---CCeEEEEEcCC--CCeEEEEEE-CCEEEEEEECCCcceEEEEc
Q psy12396 187 FFYNS--GGYVKGVEQFR-VGREMELKMDVKPRN---ISGLLLSVHSK--KDYFILQMI-DGSVKATVDNGKGPISAIYT 257 (348)
Q Consensus 187 ~f~~~--~s~~~~~~~~~-~~~~~~i~~~frT~~---~~Glll~~~~~--~~~l~l~l~-~G~l~~~~~~~~~~~~~~~~ 257 (348)
.|+.. .+|+.+.+... ....+++.+.+||.. ..+.||..... .+-+.|... +|.+.+.+ ++....+
T Consensus 10 ~Fp~~s~~~yv~l~~~~~~~l~~fTvc~wv~~~~~~~~~~~lfSy~~~~~~n~l~l~~~~~g~~~l~i--~g~~~~~--- 84 (206)
T 3pvn_A 10 VFPKESDTSYVSLKAPLTKPLKAFTVCLHFYTELSSTRGYSIFSYATKRQDNEILIFWSKDIGYSFTV--GGSEILF--- 84 (206)
T ss_dssp EECSCCSSCEEEECCCCCSCBSEEEEEEEEEESGGGTCCEEEEEEEETTEEEEEEEEEETTTEEEEEE--TTEEEEE---
T ss_pred EcCCCCCCCEEEEecCCCCCcCCEEEEEEEEecCCCCCcEEEEEEEcCCCCCEEEEEEcCCCeEEEEE--CCeEEEE---
Confidence 45443 47888865433 256799999999985 46777755432 345666665 57777766 3333222
Q ss_pred CCCCeeecCCcEEEEEEEEeC--CEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeee
Q psy12396 258 PSDPYFFCDGQWHTIVAIKTK--NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFL 335 (348)
Q Consensus 258 ~~s~~~~~dg~wH~v~v~~~~--~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GC 335 (348)
..++.||+||+|.+..+. +.++|+|||........ .....+.....+.||.-.+.. .-+......|.|.
T Consensus 85 ---~~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~~~~--~~g~~i~~~g~l~lGq~qd~~----gg~f~~~~~f~G~ 155 (206)
T 3pvn_A 85 ---EVPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKSL--KKGYTVGAEASIILGQEQDSF----GGNFEGSQSLVGD 155 (206)
T ss_dssp ---ECSSCCSSCEEEEEEEETTTCEEEEEETTEECCCEEC--CTTCCBCSSCEEEESSCCSBT----TBCCCGGGCCCEE
T ss_pred ---eccCCCCceEEEEEEEECCCCeEEEEECCEEcccccc--cCCcEECCCCEEEEccccccC----CCCcCCccceEEE
Confidence 246789999999999886 58999999987322112 122234556788998654331 1123445789999
Q ss_pred eecCceeeccCC
Q psy12396 336 INANCKAVHPLT 347 (348)
Q Consensus 336 i~~~~~~~~~~~ 347 (348)
|.++...-++|+
T Consensus 156 i~~v~iw~~aLs 167 (206)
T 3pvn_A 156 IGNVNMWDFVLS 167 (206)
T ss_dssp EEEEEEESSCCC
T ss_pred EeeEEEECccCC
Confidence 999998887775
No 43
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=98.36 E-value=9.2e-06 Score=70.36 Aligned_cols=124 Identities=11% Similarity=0.128 Sum_probs=82.3
Q ss_pred ceEEEEEEEEeCC-CCeEEEEEcCC---CCeEEEEEEC--CEEEEEEECCCcceEEEEcCCCCeeecCCcEEEEEEEEeC
Q psy12396 205 REMELKMDVKPRN-ISGLLLSVHSK---KDYFILQMID--GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTK 278 (348)
Q Consensus 205 ~~~~i~~~frT~~-~~Glll~~~~~---~~~l~l~l~~--G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~~ 278 (348)
.++.|.+.||... ..|.||...+. ..++.|.+.. ..+.+.|...++...+.+ ....+.||+||+|.+...+
T Consensus 72 ~eFsil~tlr~~~~~~g~LfsI~~~~g~~~ql~l~~~G~~~~l~~~Y~~~g~~~~~~f---~~~~L~Dg~WH~lalsV~~ 148 (251)
T 1za4_A 72 KGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSV---EEALLATGQWKSITLFVQE 148 (251)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETTSSCEEEEEEEETTTTEEEEEEEETTEEEEEEE---SSCCCCSSSCEEEEEEEET
T ss_pred CcEEEEEEEEecCCCCeEEEEEEeCCCCEEEEEEEECCCCcEEEEEEEcCCCeeeEEE---ecccccCCCEEEEEEEEEC
Confidence 6788889999665 45688866543 3466665543 378888865544433322 2567999999999999999
Q ss_pred CEEEEEEcCCCcccccCCCCCCccc-----CCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeec
Q psy12396 279 NVISVAVDSMTTDKPGLGPPGSSET-----DTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVH 344 (348)
Q Consensus 279 ~~~~l~vD~~~~~~~~~~~~~~~~~-----~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~ 344 (348)
..++|+||.+........ .+.... .....++||-..... . |.|=|+++..+-.
T Consensus 149 ~~VtLyvDC~~~~~~~l~-~~~~~i~~~~~~~~~~~~iGq~~~~~-----------~-F~G~lq~l~i~~~ 206 (251)
T 1za4_A 149 DRAQLYIDCEKMENAELD-VPIQSVFTRDLASIARLRIAKGGVND-----------N-FQGVLQNVRFVFG 206 (251)
T ss_dssp TEEEEEETTSCCEEEECS-SCGGGTSCTTGGGTEEEEESCCSTTC-----------B-CCEEEEEEEEECS
T ss_pred CEEEEEECCcccceeecc-CccccccccccCCCcEEEEEecCCCC-----------C-CeEEeEEEEEEcC
Confidence 999999999883322231 112121 125578888654432 3 9999998877644
No 44
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=98.35 E-value=1.7e-05 Score=66.84 Aligned_cols=123 Identities=14% Similarity=0.273 Sum_probs=86.1
Q ss_pred ceEEEEEEEEcCCCCCeEEEEEecCCC-CcEEEEEEeCc--EEEEEEEcCCCCceee-cCceeecCCCcEEEEEEEeCcE
Q psy12396 26 NKFDFSIDIKTTSEQDGIIFYVADVKH-IDYVALYVKDG--QIHYSFNCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS 101 (348)
Q Consensus 26 ~~~~i~~~FrT~~~~~GlLl~~~~~~~-~~~l~l~L~~G--~l~~~~~~g~~~~~~~-~~~~~~~dg~Wh~v~v~~~~~~ 101 (348)
.++.|...||......|.||-..+..+ ..++.|.+... .|.+.|...+. ...+ ..+..+.||+||+|.+...+..
T Consensus 62 ~eFsi~~t~r~~~~~~~~LfsI~~~~~~~~ql~l~l~g~~~~l~~~y~~~g~-~~~~~f~~v~l~dg~WH~l~l~V~~~~ 140 (209)
T 2erf_A 62 KGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGK-QHVVSVEEALLATGQWKSITLFVQEDR 140 (209)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETTSSCEEEEEEEETTTTEEEEEEEETTE-EEEEEESSCCCCSSSEEEEEEEEETTE
T ss_pred CCEEEEEEEEcCCCCCceEEEEEcCCCCEEEEEEEEcCCCCEEEEEEcCCCC-EEEEEEeccccCCCcEEEEEEEEECCE
Confidence 789999999965536788887777655 68999999644 78888865443 2222 2345699999999999999999
Q ss_pred EEEEECCeeeeeeeecCCCccc-----cccCCeEEeccCCCCcceeccCccccccceeeeeceEE
Q psy12396 102 GKLKIDGQVVAEGESKGSSKTL-----NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKS 161 (348)
Q Consensus 102 ~~l~vd~~~~~~~~~~~~~~~l-----~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~i 161 (348)
++|.+|-....+.........+ .....+++|-.... .. |.|-|+++++
T Consensus 141 v~L~vDC~~~~~~~l~~~~~~~~~~~~~~~~~~~iGq~~~~-----------~~-F~G~lq~l~i 193 (209)
T 2erf_A 141 AQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN-----------DN-FQGVLQNVRF 193 (209)
T ss_dssp EEEEETTTEEEEEECSSCGGGTCCTTHHHHEEEEESCCTTT-----------CB-CCEEEEEEEE
T ss_pred EEEEEcCeEeEeEEccCCchhccccccCCceEEEEecCCCC-----------CC-CeEEeEEEEE
Confidence 9999998764433333222121 11346888864431 24 9999999987
No 45
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=98.32 E-value=1.3e-05 Score=67.51 Aligned_cols=125 Identities=11% Similarity=0.123 Sum_probs=83.9
Q ss_pred ceEEEEEEEEeC-CCCeEEEEEcCC---CCeEEEEEEC--CEEEEEEECCCcceEEEEcCCCCeeecCCcEEEEEEEEeC
Q psy12396 205 REMELKMDVKPR-NISGLLLSVHSK---KDYFILQMID--GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTK 278 (348)
Q Consensus 205 ~~~~i~~~frT~-~~~Glll~~~~~---~~~l~l~l~~--G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~~ 278 (348)
.++.|.+.||.. ...|.||...+. ..++.|.+.. ..+.+.|...+....+.+ ...++.||+||+|.+...+
T Consensus 62 ~eFsi~~t~r~~~~~~~~LfsI~~~~~~~~ql~l~l~g~~~~l~~~y~~~g~~~~~~f---~~v~l~dg~WH~l~l~V~~ 138 (209)
T 2erf_A 62 KGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSV---EEALLATGQWKSITLFVQE 138 (209)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETTSSCEEEEEEEETTTTEEEEEEEETTEEEEEEE---SSCCCCSSSEEEEEEEEET
T ss_pred CCEEEEEEEEcCCCCCceEEEEEcCCCCEEEEEEEEcCCCCEEEEEEcCCCCEEEEEE---eccccCCCcEEEEEEEEEC
Confidence 678888999955 456777765542 5677888863 478888854443333322 2466999999999999999
Q ss_pred CEEEEEEcCCCcccccCCCCCCccc--CC---CCceEEcccCCCCCCCCCCCCccccceeeeeecCceeecc
Q psy12396 279 NVISVAVDSMTTDKPGLGPPGSSET--DT---NNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHP 345 (348)
Q Consensus 279 ~~~~l~vD~~~~~~~~~~~~~~~~~--~~---~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~ 345 (348)
+.++|+||-+...+.... .+.... .. ...+++|-..... . |.|=|+++...-.|
T Consensus 139 ~~v~L~vDC~~~~~~~l~-~~~~~~~~~~~~~~~~~~iGq~~~~~-----------~-F~G~lq~l~i~~~~ 197 (209)
T 2erf_A 139 DRAQLYIDCEKMENAELD-VPIQSVFTRDLASIARLRIAKGGVND-----------N-FQGVLQNVRFVFGT 197 (209)
T ss_dssp TEEEEEETTTEEEEEECS-SCGGGTCCTTHHHHEEEEESCCTTTC-----------B-CCEEEEEEEEECSC
T ss_pred CEEEEEEcCeEeEeEEcc-CCchhccccccCCceEEEEecCCCCC-----------C-CeEEeEEEEEECCC
Confidence 999999999883333332 112222 11 4578888755432 3 99999988776543
No 46
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=98.31 E-value=1.7e-05 Score=68.68 Aligned_cols=125 Identities=15% Similarity=0.293 Sum_probs=85.3
Q ss_pred ceEEEEEEEEcCCCCCeEEEEEecCCC-CcEEEEEEeC--cEEEEEEEcCCCCceeecCceeecCCCcEEEEEEEeCcEE
Q psy12396 26 NKFDFSIDIKTTSEQDGIIFYVADVKH-IDYVALYVKD--GQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSG 102 (348)
Q Consensus 26 ~~~~i~~~FrT~~~~~GlLl~~~~~~~-~~~l~l~L~~--G~l~~~~~~g~~~~~~~~~~~~~~dg~Wh~v~v~~~~~~~ 102 (348)
.++.|...||......|.||...+..+ ..+|.|.+.. ..|.+.|...++.......+..+.||+||+|.+...+..+
T Consensus 72 ~eFsil~tlr~~~~~~g~LfsI~~~~g~~~ql~l~~~G~~~~l~~~Y~~~g~~~~~~f~~~~L~Dg~WH~lalsV~~~~V 151 (251)
T 1za4_A 72 KGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDRA 151 (251)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETTSSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSCEEEEEEEETTEE
T ss_pred CcEEEEEEEEecCCCCeEEEEEEeCCCCEEEEEEEECCCCcEEEEEEEcCCCeeeEEEecccccCCCEEEEEEEEECCEE
Confidence 788999999976635678887777544 5688887754 3788888654431222223457899999999999999999
Q ss_pred EEEECCeeeeeeeecCCCccc-----cccCCeEEeccCCCCcceeccCccccccceeeeeceEEC
Q psy12396 103 KLKIDGQVVAEGESKGSSKTL-----NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSN 162 (348)
Q Consensus 103 ~l~vd~~~~~~~~~~~~~~~l-----~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in 162 (348)
.|.||-..............+ .....++||-.... .. |.|-|+++++-
T Consensus 152 tLyvDC~~~~~~~l~~~~~~i~~~~~~~~~~~~iGq~~~~-----------~~-F~G~lq~l~i~ 204 (251)
T 1za4_A 152 QLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN-----------DN-FQGVLQNVRFV 204 (251)
T ss_dssp EEEETTSCCEEEECSSCGGGTSCTTGGGTEEEEESCCSTT-----------CB-CCEEEEEEEEE
T ss_pred EEEECCcccceeeccCccccccccccCCCcEEEEEecCCC-----------CC-CeEEeEEEEEE
Confidence 999998774433332222121 11346788864421 24 99999999983
No 47
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=98.11 E-value=0.00012 Score=63.13 Aligned_cols=130 Identities=16% Similarity=0.212 Sum_probs=87.9
Q ss_pred ccceEEEEEEEE-cCCCCC---eEEEEEecCCCCcEEEEEEeC--cEEEEEEEcCCCCceeecCce--eecCCCcEEEEE
Q psy12396 24 FKNKFDFSIDIK-TTSEQD---GIIFYVADVKHIDYVALYVKD--GQIHYSFNCGSGPMALSSGDK--LILDGEWHTVEF 95 (348)
Q Consensus 24 ~~~~~~i~~~Fr-T~~~~~---GlLl~~~~~~~~~~l~l~L~~--G~l~~~~~~g~~~~~~~~~~~--~~~dg~Wh~v~v 95 (348)
...++.|.+.|| ... .. ..||-..+..+..++.|.|.. ..|.+.+....+....+.-.. .+.||+||+|.+
T Consensus 84 lp~eFsil~tlr~~~~-~~~~~~~L~sI~d~~~~~qlgv~l~g~~~~l~~~y~~~~g~~q~v~F~~~~~L~Dg~WHklal 162 (245)
T 2uur_A 84 LPEEYSFLTTFRMTGS-TLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDSQWHKIMI 162 (245)
T ss_dssp CCSSEEEEEEEECCGG-GGGCEEEEEEEECTTSCEEEEEEEEGGGTEEEEEEEBTTSCEEEEEECCCGGGCSSSCEEEEE
T ss_pred CCCCEEEEEEEEcCCC-CCCcceEEEEEECCCCcEEEEEEEcCCCCEEEEEecCCCCCeeEEEecCCccccCCCEEEEEE
Confidence 456889999999 443 33 347877776566799999984 467777655444233333233 589999999999
Q ss_pred EEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeeeceEECCEE
Q psy12396 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165 (348)
Q Consensus 96 ~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in~~~ 165 (348)
...++.++|.||=....+.... ....++.++.++||-.... ....|.|-|+++.+--.+
T Consensus 163 sV~~~~VtLyvDC~~~~~~~l~-~~~~i~~~G~~~lG~~~~~----------~~~~f~g~lQ~l~i~~dp 221 (245)
T 2uur_A 163 GVERSSATLFVDCNRIESLPIK-PRGPIDIDGFAVLGKLADN----------PQVSVPFELQWMLIHCDP 221 (245)
T ss_dssp EEETTEEEEEETTEEEEEEECC-CBCCCCCSSEEEEEEESSC----------TTCBCCEEEEEEEEESCT
T ss_pred EEECCEEEEEEecCcccccccC-CCCccccCCEEEEEEecCC----------CCCceEEEeEEEEEEcCc
Confidence 9999999999998764433332 2234556667788865321 113699999999984433
No 48
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=97.98 E-value=0.00033 Score=63.85 Aligned_cols=142 Identities=14% Similarity=0.090 Sum_probs=90.8
Q ss_pred eeEeCCCCeeeEEecCCcCcccceEEEEEEEEcCCC-CCeEEEEEecCCCCcEEEEEE--------eCcEEEEEEEcCCC
Q psy12396 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSE-QDGIIFYVADVKHIDYVALYV--------KDGQIHYSFNCGSG 74 (348)
Q Consensus 4 ~~~F~g~~~sy~~~~~~~~~~~~~~~i~~~FrT~~~-~~GlLl~~~~~~~~~~l~l~L--------~~G~l~~~~~~g~~ 74 (348)
+..|.+ +|+.++.........++++.++|.... ....|+- . ...+.+.+ ..++|++. .+ +
T Consensus 142 ~~~~~~---~~~~~~~~~~~~~~~~T~eawv~~~~~~~~~ti~g--~---e~~~~lr~gd~~~g~~~~~~Lq~~--~~-~ 210 (355)
T 4dqa_A 142 AGNFSN---HYISVKFPVGTFFSSFTYEALINVDYFLDNNTIMG--T---EGVMILRIGDAGGGITPKDYLEVA--GG-Q 210 (355)
T ss_dssp EEEEES---CCEEECCCTTCCBSSEEEEEEEEESCCCSSEEEEE--E---TTTEEEEEEEGGGTSEEEEEEEEE--ES-S
T ss_pred cceecC---CEEEcccCCCCCCCcEEEEEEEECCcCCCcceEEe--C---CCeEEEEEecCCCCCCcCCeEEEe--cC-C
Confidence 345665 588876422335678999999999872 2445542 1 12344445 34456664 22 2
Q ss_pred CceeecCceeecCCCcEEEEEEEe--CcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccc
Q psy12396 75 PMALSSGDKLILDGEWHTVEFSRQ--QLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152 (348)
Q Consensus 75 ~~~~~~~~~~~~dg~Wh~v~v~~~--~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F 152 (348)
.+.+...+.+|+||+|.+++. ++.++|.||+....+.........+.....++||+...... ....|
T Consensus 211 ---~~~s~~~l~~g~W~HvA~t~d~~~~~~~lYvNG~~~~~~~~~~~~~~~~~~~~l~IG~~~~~~~--------~~~~f 279 (355)
T 4dqa_A 211 ---NYRVTKPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDGFDPNSDMGFYIGRIYGFKW--------GERPF 279 (355)
T ss_dssp ---CEECSSCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCCBCTTSTTCEEESCCTTCTT--------CCCCC
T ss_pred ---ccccCCcccCCCEEEEEEEEECCCCEEEEEECCEEEEEEecCCCccccCCCceEEECCCCCCCC--------CCcce
Confidence 244566899999999999999 78999999998755444322222222235699998643210 13569
Q ss_pred eeeeeceEECCEEcC
Q psy12396 153 VGCLRNLKSNNKLVQ 167 (348)
Q Consensus 153 ~GCi~~l~in~~~~~ 167 (348)
.|.|.++++-++.+.
T Consensus 280 ~G~IdevrIw~~aLs 294 (355)
T 4dqa_A 280 HGKMSEVRVWSVART 294 (355)
T ss_dssp EEEEEEEEEESSCCC
T ss_pred eEEEEEEEEECCcCC
Confidence 999999999776653
No 49
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=97.90 E-value=0.00014 Score=62.52 Aligned_cols=129 Identities=14% Similarity=0.128 Sum_probs=84.3
Q ss_pred ccceEEEEEEEE-eCCCC---eEEEEEcCC--CCeEEEEEE--CCEEEEEEECCCcc-eEEEEcCCCCeeecCCcEEEEE
Q psy12396 203 VGREMELKMDVK-PRNIS---GLLLSVHSK--KDYFILQMI--DGSVKATVDNGKGP-ISAIYTPSDPYFFCDGQWHTIV 273 (348)
Q Consensus 203 ~~~~~~i~~~fr-T~~~~---Glll~~~~~--~~~l~l~l~--~G~l~~~~~~~~~~-~~~~~~~~s~~~~~dg~wH~v~ 273 (348)
...++.|-+.|| ..... +.||...++ ..++.|.+. ...+.+.+....+. ..+ .+....++.||+||+|.
T Consensus 84 lp~eFsil~tlr~~~~~~~~~~~L~sI~d~~~~~qlgv~l~g~~~~l~~~y~~~~g~~q~v--~F~~~~~L~Dg~WHkla 161 (245)
T 2uur_A 84 LPEEYSFLTTFRMTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTA--AFSNLSSLFDSQWHKIM 161 (245)
T ss_dssp CCSSEEEEEEEECCGGGGGCEEEEEEEECTTSCEEEEEEEEGGGTEEEEEEEBTTSCEEEE--EECCCGGGCSSSCEEEE
T ss_pred CCCCEEEEEEEEcCCCCCCcceEEEEEECCCCcEEEEEEEcCCCCEEEEEecCCCCCeeEE--EecCCccccCCCEEEEE
Confidence 345688888888 44333 346666554 457778777 35677777655443 333 23222358999999999
Q ss_pred EEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeecc
Q psy12396 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHP 345 (348)
Q Consensus 274 v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~ 345 (348)
+...++.++|+||-+...+..+. ....+...+.++||-..... ...|.|=|+.+.+.-.|
T Consensus 162 lsV~~~~VtLyvDC~~~~~~~l~--~~~~i~~~G~~~lG~~~~~~----------~~~f~g~lQ~l~i~~dp 221 (245)
T 2uur_A 162 IGVERSSATLFVDCNRIESLPIK--PRGPIDIDGFAVLGKLADNP----------QVSVPFELQWMLIHCDP 221 (245)
T ss_dssp EEEETTEEEEEETTEEEEEEECC--CBCCCCCSSEEEEEEESSCT----------TCBCCEEEEEEEEESCT
T ss_pred EEEECCEEEEEEecCcccccccC--CCCccccCCEEEEEEecCCC----------CCceEEEeEEEEEEcCc
Confidence 99999999999998873333332 22345667788888763221 12688999888776555
No 50
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=97.59 E-value=0.00041 Score=63.18 Aligned_cols=134 Identities=7% Similarity=-0.010 Sum_probs=83.0
Q ss_pred eeEEeeecc-cccceEEEEEEEEeCCC--CeEEEEEcCCCCeEEEEEE--------CCEEEEEEECCCcceEEEEcCCCC
Q psy12396 193 GYVKGVEQF-RVGREMELKMDVKPRNI--SGLLLSVHSKKDYFILQMI--------DGSVKATVDNGKGPISAIYTPSDP 261 (348)
Q Consensus 193 s~~~~~~~~-~~~~~~~i~~~frT~~~--~Glll~~~~~~~~l~l~l~--------~G~l~~~~~~~~~~~~~~~~~~s~ 261 (348)
.|+...... .....+.++.++|...- ...|+- .+ ..+.+.+. .++|.+.. + +. + .+.
T Consensus 148 ~~~~~~~~~~~~~~~~T~eawv~~~~~~~~~ti~g--~e-~~~~lr~gd~~~g~~~~~~Lq~~~--~-~~--~----~s~ 215 (355)
T 4dqa_A 148 HYISVKFPVGTFFSSFTYEALINVDYFLDNNTIMG--TE-GVMILRIGDAGGGITPKDYLEVAG--G-QN--Y----RVT 215 (355)
T ss_dssp CCEEECCCTTCCBSSEEEEEEEEESCCCSSEEEEE--ET-TTEEEEEEEGGGTSEEEEEEEEEE--S-SC--E----ECS
T ss_pred CEEEcccCCCCCCCcEEEEEEEECCcCCCcceEEe--CC-CeEEEEEecCCCCCCcCCeEEEec--C-Cc--c----ccC
Confidence 466554211 12346899999998753 334432 12 34445553 34455532 2 22 2 246
Q ss_pred eeecCCcEEEEEEEEe--CCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecC
Q psy12396 262 YFFCDGQWHTIVAIKT--KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINAN 339 (348)
Q Consensus 262 ~~~~dg~wH~v~v~~~--~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~ 339 (348)
..+.+|+||+|.+... .+.++|+|||.. ............+.....++||...... .....|.|.|.++
T Consensus 216 ~~l~~g~W~HvA~t~d~~~~~~~lYvNG~~-~~~~~~~~~~~~~~~~~~l~IG~~~~~~--------~~~~~f~G~Idev 286 (355)
T 4dqa_A 216 KPLLTNRWYHVALTYDQPTGKTGIYVNGEK-WAGSDWGIDGFDPNSDMGFYIGRIYGFK--------WGERPFHGKMSEV 286 (355)
T ss_dssp SCCCSSCEEEEEEEEETTTTEEEEEETTEE-EEEEECCCCCBCTTSTTCEEESCCTTCT--------TCCCCCEEEEEEE
T ss_pred CcccCCCEEEEEEEEECCCCEEEEEECCEE-EEEEecCCCccccCCCceEEECCCCCCC--------CCCcceeEEEEEE
Confidence 6899999999999999 789999999987 3222111122222234679999864321 0146899999999
Q ss_pred ceeeccCC
Q psy12396 340 CKAVHPLT 347 (348)
Q Consensus 340 ~~~~~~~~ 347 (348)
.+.-++|+
T Consensus 287 rIw~~aLs 294 (355)
T 4dqa_A 287 RVWSVART 294 (355)
T ss_dssp EEESSCCC
T ss_pred EEECCcCC
Confidence 99988875
No 51
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=97.06 E-value=0.041 Score=50.20 Aligned_cols=147 Identities=11% Similarity=0.086 Sum_probs=89.9
Q ss_pred EeCCCCeeeEEecCCcC----cccceEEEEEEEEcCCCCC---------e--EEEEEecCC---CCcEEEEEEeCcEEEE
Q psy12396 6 IAGTSKSSRIEYPTITG----RFKNKFDFSIDIKTTSEQD---------G--IIFYVADVK---HIDYVALYVKDGQIHY 67 (348)
Q Consensus 6 ~F~g~~~sy~~~~~~~~----~~~~~~~i~~~FrT~~~~~---------G--lLl~~~~~~---~~~~l~l~L~~G~l~~ 67 (348)
.|.++.+|.+.+...+. .....++|+|++|+.. .+ | .|+=.-... ...-..+.|.++.+.+
T Consensus 61 ~l~~~~~s~~~V~~~n~ii~N~~t~dFSISFWvK~~k-~~~~~i~~~~~~e~TIin~k~~n~~s~nsGW~I~l~gn~liw 139 (452)
T 1a8d_A 61 HLVNNESSEVIVHKAMDIEYNDMFNNFTVSFWLRVPK-VSASHLEQYGTNEYSIISSMKKHSLSIGSGWSVSLKGNNLIW 139 (452)
T ss_dssp EEESSTTCCEEEECCGGGTTTTTTSCEEEEEEEECCC-CCHHHHHHHTTCEEEEEECCEECGGGCEEEEEEEEETTEEEE
T ss_pred EeccCCCcceEEecCchHhhccCCCceEEEEEEECCC-cCcccccccccCcceEEeeeccccccCCCCeEEEeCCCeEEE
Confidence 45554344544432222 1245899999999988 62 1 444222111 1234677888999999
Q ss_pred EEEcCCCCceeec---Cceeec---CCCcEEEEEEEe-CcEEEEEECCeeeeeeeecCCCccccccCCeEEe--ccCCCC
Q psy12396 68 SFNCGSGPMALSS---GDKLIL---DGEWHTVEFSRQ-QLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG--GVPLNT 138 (348)
Q Consensus 68 ~~~~g~~~~~~~~---~~~~~~---dg~Wh~v~v~~~-~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iG--G~~~~~ 138 (348)
.+....+....+. .+..++ +|+||+|.++.. .+...+.+|+....+.... ....+.....+-+| +.+.
T Consensus 140 ~l~Dsng~~~~i~f~~~~~~Isd~~~nkW~fVtItvDR~g~~~IYING~Lv~s~~It-~lG~I~ss~~i~~gi~~~~d-- 216 (452)
T 1a8d_A 140 TLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEIT-GLGAIREDNNITLKLDRCNN-- 216 (452)
T ss_dssp EEECTTSCEEEEEEECCSBTTSCSSSSSCEEEEEEECTTSEEEEEETTEEEEEEECT-TCCCCCCCSEEEEEEESCCC--
T ss_pred EEEcCCCceeeEEeccccccCccccCCeEEEEEEEECCCCCEEEEECCEEeeccchh-hccceeecCeEEEEEcccCC--
Confidence 8887554222221 233444 699999999999 4677999999885554433 22234444445555 4432
Q ss_pred cceeccCccccccceeeeeceEECCEEcC
Q psy12396 139 STLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167 (348)
Q Consensus 139 ~~~~~~~~~~~~~F~GCi~~l~in~~~~~ 167 (348)
.++.|+|+++.+=++++.
T Consensus 217 -----------~~~~~~IDef~Iynk~Lt 234 (452)
T 1a8d_A 217 -----------NNQYVSIDKFRIFCKALN 234 (452)
T ss_dssp -----------TTCEEEEEEEEEESSCCC
T ss_pred -----------CcccceEeeEEEecccCC
Confidence 346689999999877775
No 52
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=96.96 E-value=0.02 Score=52.24 Aligned_cols=127 Identities=9% Similarity=0.155 Sum_probs=82.3
Q ss_pred ceEEEEEEEEeCCC---------Ce--EEEEEc-CC----CCeEEEEEECCEEEEEEECCCcc-eEEEEcCCCCeeec--
Q psy12396 205 REMELKMDVKPRNI---------SG--LLLSVH-SK----KDYFILQMIDGSVKATVDNGKGP-ISAIYTPSDPYFFC-- 265 (348)
Q Consensus 205 ~~~~i~~~frT~~~---------~G--lll~~~-~~----~~~l~l~l~~G~l~~~~~~~~~~-~~~~~~~~s~~~~~-- 265 (348)
.+++|+|++|+.+. +| .|+-.. .. ..-+.+.|.++.+.+.+...++. ..+.+. ..+..++
T Consensus 85 ~dFSISFWvK~~k~~~~~i~~~~~~e~TIin~k~~n~~s~nsGW~I~l~gn~liw~l~Dsng~~~~i~f~-~~~~~Isd~ 163 (452)
T 1a8d_A 85 NNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSIGSGWSVSLKGNNLIWTLKDSAGEVRQITFR-DLPDKFNAY 163 (452)
T ss_dssp SCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGCEEEEEEEEETTEEEEEEECTTSCEEEEEEE-CCSBTTSCS
T ss_pred CceEEEEEEECCCcCcccccccccCcceEEeeeccccccCCCCeEEEeCCCeEEEEEEcCCCceeeEEec-cccccCccc
Confidence 47999999999874 22 444222 11 23467888999999988875543 333222 1233444
Q ss_pred -CCcEEEEEEEEeC-CEEEEEEcCCCcccccCCCCCCcccCCCCceEEc--ccCCCCCCCCCCCCccccceeeeeecCce
Q psy12396 266 -DGQWHTIVAIKTK-NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG--GHPFLSLSSKKSGPRTKRRSVFLINANCK 341 (348)
Q Consensus 266 -dg~wH~v~v~~~~-~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iG--G~~~~~~~~~~~~~~~~~~F~GCi~~~~~ 341 (348)
||+||+|+|..++ +...+.|||+....... .....+.....+-+| +..+ .++.|+|+.+-.
T Consensus 164 ~~nkW~fVtItvDR~g~~~IYING~Lv~s~~I--t~lG~I~ss~~i~~gi~~~~d-------------~~~~~~IDef~I 228 (452)
T 1a8d_A 164 LANKWVFITITNDRLSSANLYINGVLMGSAEI--TGLGAIREDNNITLKLDRCNN-------------NNQYVSIDKFRI 228 (452)
T ss_dssp SSSSCEEEEEEECTTSEEEEEETTEEEEEEEC--TTCCCCCCCSEEEEEEESCCC-------------TTCEEEEEEEEE
T ss_pred cCCeEEEEEEEECCCCCEEEEECCEEeeccch--hhccceeecCeEEEEEcccCC-------------CcccceEeeEEE
Confidence 7999999999995 56699999988332322 122234444455555 5443 356789999999
Q ss_pred eeccCC
Q psy12396 342 AVHPLT 347 (348)
Q Consensus 342 ~~~~~~ 347 (348)
.=+||+
T Consensus 229 ynk~Lt 234 (452)
T 1a8d_A 229 FCKALN 234 (452)
T ss_dssp ESSCCC
T ss_pred ecccCC
Confidence 999987
No 53
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=96.82 E-value=0.0085 Score=59.22 Aligned_cols=131 Identities=14% Similarity=0.062 Sum_probs=84.9
Q ss_pred cceEEEEEEEEeCCCC--eEEEEEcCC-----CCeEEEEEEC-CEEEEEEECCCcc--eEEEEcCCCCeeec---CC--c
Q psy12396 204 GREMELKMDVKPRNIS--GLLLSVHSK-----KDYFILQMID-GSVKATVDNGKGP--ISAIYTPSDPYFFC---DG--Q 268 (348)
Q Consensus 204 ~~~~~i~~~frT~~~~--Glll~~~~~-----~~~l~l~l~~-G~l~~~~~~~~~~--~~~~~~~~s~~~~~---dg--~ 268 (348)
..+.+|.+.||++..+ ..||...+. ..|+.|+|.+ |.+.+.+...++. +.. . .+..+- .| +
T Consensus 34 l~~~Ti~~~~~~~~~~~~~~lfs~s~~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~--~--~~~~~~~~~~~~~~ 109 (679)
T 2sli_A 34 MTQGTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYITNSGGIGIELRNTDGVFNYTL--D--RPASVRALYKGERV 109 (679)
T ss_dssp CSSEEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEETTSCEEEEEEECTTTCEEEE--E--ESSCCCSEETTEEC
T ss_pred ccCeEEEEEEEcCCCCCceEEEEeecCCccccCcceEEEEcCCCeEEEEEecCCCCeeeec--c--cccccccccCCCce
Confidence 3568999999998654 335555542 3799999984 7887776554332 222 1 112222 35 6
Q ss_pred EEEEEEEEe--CCEEEEEEcCCCcccccCCC-CCC-cccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeec
Q psy12396 269 WHTIVAIKT--KNVISVAVDSMTTDKPGLGP-PGS-SETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVH 344 (348)
Q Consensus 269 wH~v~v~~~--~~~~~l~vD~~~~~~~~~~~-~~~-~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~ 344 (348)
|++|.+..+ .+.++|+|||+. +...... ..+ ..+.....+.||+..... . ..-+|.|=|+++.++=+
T Consensus 110 ~~~va~~~~~~~~~~~lyvnG~~-v~~~~~~~~~f~~~~~~~~~~~iG~~~~~g---~-----~~~~f~G~i~~~~iy~~ 180 (679)
T 2sli_A 110 FNTVALKADAANKQCRLFANGEL-LATLDKDAFKFISDITGVDNVTLGGTKRQG---K-----IAYPFGGTIGDIKVYSN 180 (679)
T ss_dssp CEEEEEEEETTTTEEEEEETTEE-EEEEECSSCCCGGGSTTCCEEEESSEEETT---E-----EESCCCEEEEEEEEESS
T ss_pred eEEEEEEEECCCCeEEEEECCEE-eEeecccccccccccCCCceEEEeeeecCC---c-----eeccccceEeEEEEeCC
Confidence 999999999 579999999988 4332211 111 224445789999964321 1 11259999999999999
Q ss_pred cCC
Q psy12396 345 PLT 347 (348)
Q Consensus 345 ~~~ 347 (348)
||+
T Consensus 181 ~Ls 183 (679)
T 2sli_A 181 ALS 183 (679)
T ss_dssp CCC
T ss_pred CCC
Confidence 986
No 54
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=96.79 E-value=0.035 Score=54.87 Aligned_cols=133 Identities=15% Similarity=0.181 Sum_probs=86.6
Q ss_pred ceEEEEEEEEcCCCCC--eEEEEEecCC---CCcEEEEEEe-CcEEEEEEEcCCCC-ceeecCceeec---CC--CcEEE
Q psy12396 26 NKFDFSIDIKTTSEQD--GIIFYVADVK---HIDYVALYVK-DGQIHYSFNCGSGP-MALSSGDKLIL---DG--EWHTV 93 (348)
Q Consensus 26 ~~~~i~~~FrT~~~~~--GlLl~~~~~~---~~~~l~l~L~-~G~l~~~~~~g~~~-~~~~~~~~~~~---dg--~Wh~v 93 (348)
...+|.|+|++.. .. ..||-..+.. ...|+.+.|. +|++.+.+....+- ...+..+..+. .| .||+|
T Consensus 57 ~~~T~~~~~~~~~-~~~~~~lfs~sn~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 135 (686)
T 2jkb_A 57 ESQTVVMKFKADK-PNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQKGINYLFSRPASLWGKHKGQAVENTL 135 (686)
T ss_dssp SCEEEEEEEECSS-CCSEEEEEEEECCSTTCTTCEEEEEEETTSCEEEEEEETTTTEEEEEEESSCCCCEETTEECCEEE
T ss_pred CceEEEEEEEccC-CCCeeEEEEeecCcccccCcceEEEEcCCCeEEEEEecCCCCeeeeccccccccccccCCcceeEE
Confidence 6789999999987 43 3556555532 2589999996 88888887754331 12222233333 35 79999
Q ss_pred EEEEe--CcEEEEEECCeeeeeeeecCC--CccccccCCeEEeccCCCCcceeccCccccccceeeeeceEECCEEcC
Q psy12396 94 EFSRQ--QLSGKLKIDGQVVAEGESKGS--SKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167 (348)
Q Consensus 94 ~v~~~--~~~~~l~vd~~~~~~~~~~~~--~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in~~~~~ 167 (348)
.+... .+.+.|.||+....+...... ...+.--..+.+|+...... ..-+|.|-|+++.+-++++.
T Consensus 136 a~~~d~~~~~~~lyvnG~~v~~~~~~~~~~~~~~~~~~~~~iG~~~~~g~--------~~~~f~G~id~~~iy~~~Ls 205 (686)
T 2jkb_A 136 VFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNREGK--------EHYLAKGSIDEISLFNKAIS 205 (686)
T ss_dssp EEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE--------EESCCEEEEEEEEEESSCCC
T ss_pred EEEEECCCCeEEEEECCEEEEeecccccceeccCCCcceeeecccccCCc--------ccccccceEeEEEEecCCCC
Confidence 99998 679999999988655432211 11222124688998532211 11259999999999877764
No 55
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=96.70 E-value=0.017 Score=57.10 Aligned_cols=130 Identities=12% Similarity=0.116 Sum_probs=85.1
Q ss_pred ceEEEEEEEEeCCCC--eEEEEEcCC-----CCeEEEEEE-CCEEEEEEECCCcc--eEEEEcCCCCeeec---CC--cE
Q psy12396 205 REMELKMDVKPRNIS--GLLLSVHSK-----KDYFILQMI-DGSVKATVDNGKGP--ISAIYTPSDPYFFC---DG--QW 269 (348)
Q Consensus 205 ~~~~i~~~frT~~~~--Glll~~~~~-----~~~l~l~l~-~G~l~~~~~~~~~~--~~~~~~~~s~~~~~---dg--~w 269 (348)
.+.+|.++|++...+ -.||..++. ..++.++|. +|.+.+.+....+. +.+. .+..+. .| .|
T Consensus 57 ~~~T~~~~~~~~~~~~~~~lfs~sn~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~ 132 (686)
T 2jkb_A 57 ESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQKGINYLFS----RPASLWGKHKGQAVE 132 (686)
T ss_dssp SCEEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEETTSCEEEEEEETTTTEEEEEE----ESSCCCCEETTEECC
T ss_pred CceEEEEEEEccCCCCeeEEEEeecCcccccCcceEEEEcCCCeEEEEEecCCCCeeeecc----ccccccccccCCcce
Confidence 557899999987644 245555432 478999997 78888877655442 2221 122233 45 79
Q ss_pred EEEEEEEe--CCEEEEEEcCCCcccccCCCC--CCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeecc
Q psy12396 270 HTIVAIKT--KNVISVAVDSMTTDKPGLGPP--GSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHP 345 (348)
Q Consensus 270 H~v~v~~~--~~~~~l~vD~~~~~~~~~~~~--~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~ 345 (348)
|+|.+..+ .+.++|+|||+. +....... ....++....+-||+..... . ..-.|.|=|+++.++=+|
T Consensus 133 ~~va~~~d~~~~~~~lyvnG~~-v~~~~~~~~~~~~~~~~~~~~~iG~~~~~g---~-----~~~~f~G~id~~~iy~~~ 203 (686)
T 2jkb_A 133 NTLVFVSDSKDKTYTMYVNGIE-VFSETVDTFLPISNINGIDKATLGAVNREG---K-----EHYLAKGSIDEISLFNKA 203 (686)
T ss_dssp EEEEEEEETTTTEEEEEETTEE-EEEEECSSCCCGGGSTTCCEEEESSEEETT---E-----EESCCEEEEEEEEEESSC
T ss_pred eEEEEEEECCCCeEEEEECCEE-EEeecccccceeccCCCcceeeecccccCC---c-----ccccccceEeEEEEecCC
Confidence 99999999 679999999988 43321111 11123444678899854332 1 112599999999999999
Q ss_pred CC
Q psy12396 346 LT 347 (348)
Q Consensus 346 ~~ 347 (348)
|+
T Consensus 204 Ls 205 (686)
T 2jkb_A 204 IS 205 (686)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 56
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=96.68 E-value=0.05 Score=53.73 Aligned_cols=152 Identities=15% Similarity=0.198 Sum_probs=95.6
Q ss_pred eEeCCCCeeeEEecCCcCc----ccceEEEEEEEEcCCCCC--eEEEEEecCC---CCcEEEEEEe-CcEEEEEEEcCCC
Q psy12396 5 VIAGTSKSSRIEYPTITGR----FKNKFDFSIDIKTTSEQD--GIIFYVADVK---HIDYVALYVK-DGQIHYSFNCGSG 74 (348)
Q Consensus 5 ~~F~g~~~sy~~~~~~~~~----~~~~~~i~~~FrT~~~~~--GlLl~~~~~~---~~~~l~l~L~-~G~l~~~~~~g~~ 74 (348)
+.+.+ ++.+.++..... ....++|.|+||+.. .+ ..||-..+.. ...|+.+.|. +|++.+.+....+
T Consensus 12 ~~~~~--~~~~~l~~~~~~~~~~~l~~~Ti~~~~~~~~-~~~~~~lfs~s~~~~~~~~~~~~~~i~~~g~~~~~~r~~~~ 88 (679)
T 2sli_A 12 VDIAE--GQGYSLDQEAGAKYVKAMTQGTIILSYKSTS-ENGIQSLFSVGNSTAGNQDRHFHIYITNSGGIGIELRNTDG 88 (679)
T ss_dssp EEECT--TTCEECTTSTTHHHHTTCSSEEEEEEEEECC-CCSEEEEEEEECCSTTCTTEEEEEEEETTSCEEEEEEECTT
T ss_pred EEecC--CCceeCCHHHHHHhhccccCeEEEEEEEcCC-CCCceEEEEeecCCccccCcceEEEEcCCCeEEEEEecCCC
Confidence 34565 456888752211 147899999999987 44 3555555533 2479999998 5788887665433
Q ss_pred C-ceeecCceeec---CC--CcEEEEEEEe--CcEEEEEECCeeeeeeeecCC--CccccccCCeEEeccCCCCcceecc
Q psy12396 75 P-MALSSGDKLIL---DG--EWHTVEFSRQ--QLSGKLKIDGQVVAEGESKGS--SKTLNIFGPFYLGGVPLNTSTLVRG 144 (348)
Q Consensus 75 ~-~~~~~~~~~~~---dg--~Wh~v~v~~~--~~~~~l~vd~~~~~~~~~~~~--~~~l~~~~~~~iGG~~~~~~~~~~~ 144 (348)
. ......+..+. .| +||+|.+... .+.+.|.||+....+...... ...+.--..+.||+......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~lyvnG~~v~~~~~~~~~f~~~~~~~~~~~iG~~~~~g~----- 163 (679)
T 2sli_A 89 VFNYTLDRPASVRALYKGERVFNTVALKADAANKQCRLFANGELLATLDKDAFKFISDITGVDNVTLGGTKRQGK----- 163 (679)
T ss_dssp TCEEEEEESSCCCSEETTEECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE-----
T ss_pred CeeeecccccccccccCCCceeEEEEEEEECCCCeEEEEECCEEeEeecccccccccccCCCceEEEeeeecCCc-----
Confidence 1 22222233333 24 7999999988 589999999988655443211 12222224789999532111
Q ss_pred CccccccceeeeeceEECCEEcC
Q psy12396 145 NLGLNDTFVGCLRNLKSNNKLVQ 167 (348)
Q Consensus 145 ~~~~~~~F~GCi~~l~in~~~~~ 167 (348)
..-+|.|-|+++.+-++.+.
T Consensus 164 ---~~~~f~G~i~~~~iy~~~Ls 183 (679)
T 2sli_A 164 ---IAYPFGGTIGDIKVYSNALS 183 (679)
T ss_dssp ---EESCCCEEEEEEEEESSCCC
T ss_pred ---eeccccceEeEEEEeCCCCC
Confidence 11259999999999877764
No 57
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=96.38 E-value=0.017 Score=47.20 Aligned_cols=81 Identities=7% Similarity=0.021 Sum_probs=55.3
Q ss_pred eEEEEEEEEeCC-----CCeEEEEE-cCCCCeEEEEEEC--CEEEEEEECCCcceEEEEcCCCCeeecCCcEEEEEEEEe
Q psy12396 206 EMELKMDVKPRN-----ISGLLLSV-HSKKDYFILQMID--GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKT 277 (348)
Q Consensus 206 ~~~i~~~frT~~-----~~Glll~~-~~~~~~l~l~l~~--G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~ 277 (348)
++.+++.+|... ..|++|.. .+..++..+.+.. +++++.-..++....+. + .+..+..|+||+++|...
T Consensus 65 Df~le~dvk~~~~~~~g~~Gi~fR~~~d~~~gY~~~i~~~~~~~~l~k~~~g~~~~L~-~--~~~~~~~g~w~~l~I~~~ 141 (185)
T 4b1m_A 65 DFTYESDITIKDGNGRGAGALMFRSDKDAKNGYLANVDAKHDLVKFFKFENGAASVIA-E--YKTPIDVNKKYHLKTEAE 141 (185)
T ss_dssp SEEEEEEEEEEEEEEEEEEEEEEEECTTSSSEEEEEEETTTTEEEEEEEETTEEEEEE-E--EECCCCSSCCEEEEEEEE
T ss_pred CEEEEEEEEEcCCCCcceEEEEEEEcCCCCCcEEEEEECCCCEEEEEEEeCCcEEEee-e--ccccCCCCCeEEEEEEEE
Confidence 466666666543 35888887 4456788888875 56666433332222231 1 124677899999999999
Q ss_pred CCEEEEEEcCCC
Q psy12396 278 KNVISVAVDSMT 289 (348)
Q Consensus 278 ~~~~~l~vD~~~ 289 (348)
++++++.||+..
T Consensus 142 G~~i~~~vnG~~ 153 (185)
T 4b1m_A 142 GDRFKIYLDDRL 153 (185)
T ss_dssp TTEEEEEETTEE
T ss_pred CCEEEEEECCEE
Confidence 999999999977
No 58
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=96.23 E-value=0.06 Score=43.93 Aligned_cols=86 Identities=10% Similarity=0.085 Sum_probs=58.7
Q ss_pred cceEEEEEEEEcCCCCC-----eEEEEEecCCCCcEEEEEEeC--cEEEEEEEcCCCCceee-cCceeecCCCcEEEEEE
Q psy12396 25 KNKFDFSIDIKTTSEQD-----GIIFYVADVKHIDYVALYVKD--GQIHYSFNCGSGPMALS-SGDKLILDGEWHTVEFS 96 (348)
Q Consensus 25 ~~~~~i~~~FrT~~~~~-----GlLl~~~~~~~~~~l~l~L~~--G~l~~~~~~g~~~~~~~-~~~~~~~dg~Wh~v~v~ 96 (348)
...+.++++|+... .+ |++|.... +...+..+.+.. +.+.+.-..++. ...+ ..+..+..|+||+++|.
T Consensus 63 ~~Df~le~dvk~~~-~~~~g~~Gi~fR~~~-d~~~gY~~~i~~~~~~~~l~k~~~g~-~~~L~~~~~~~~~g~w~~l~I~ 139 (185)
T 4b1m_A 63 GSDFTYESDITIKD-GNGRGAGALMFRSDK-DAKNGYLANVDAKHDLVKFFKFENGA-ASVIAEYKTPIDVNKKYHLKTE 139 (185)
T ss_dssp ESSEEEEEEEEEEE-EEEEEEEEEEEEECT-TSSSEEEEEEETTTTEEEEEEEETTE-EEEEEEEECCCCSSCCEEEEEE
T ss_pred ccCEEEEEEEEEcC-CCCcceEEEEEEEcC-CCCCcEEEEEECCCCEEEEEEEeCCc-EEEeeeccccCCCCCeEEEEEE
Confidence 46778888888765 43 67666633 345677777765 566654333332 2222 33457888999999999
Q ss_pred EeCcEEEEEECCeeeee
Q psy12396 97 RQQLSGKLKIDGQVVAE 113 (348)
Q Consensus 97 ~~~~~~~l~vd~~~~~~ 113 (348)
..+..+++.||+.....
T Consensus 140 ~~G~~i~~~vnG~~v~~ 156 (185)
T 4b1m_A 140 AEGDRFKIYLDDRLVID 156 (185)
T ss_dssp EETTEEEEEETTEEEEE
T ss_pred EECCEEEEEECCEEEEE
Confidence 99999999999987543
No 59
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=92.45 E-value=2.5 Score=43.06 Aligned_cols=131 Identities=7% Similarity=0.046 Sum_probs=81.0
Q ss_pred cceEEEEEEEEeCCC-----C------eEEEEEcCCCCeEEEEEECCEEEEEEECCCcc-eEEEEcCCCCeeec--CCcE
Q psy12396 204 GREMELKMDVKPRNI-----S------GLLLSVHSKKDYFILQMIDGSVKATVDNGKGP-ISAIYTPSDPYFFC--DGQW 269 (348)
Q Consensus 204 ~~~~~i~~~frT~~~-----~------Glll~~~~~~~~l~l~l~~G~l~~~~~~~~~~-~~~~~~~~s~~~~~--dg~w 269 (348)
..++.|+|++|..+. . -.|+-......=..|++.++.+..++...+|. ..+-+.=.....+. -++|
T Consensus 922 ~~nFSIsFWiRipk~~~~~it~y~~nEyTiIg~~~nNsGW~Isi~~n~lIWtl~D~ng~~k~I~f~y~~~~nisdyiNkW 1001 (1290)
T 1epw_A 922 FLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKNNSGWKISIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYINRW 1001 (1290)
T ss_dssp SCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEECTTCCEEEEEEECCSSCSSCSSTTSC
T ss_pred ccceeEEEEEEcCCccccccccccCCCceEEEEecCCCCcEEEECCCeEEEEEecCCCcceeEEEecccccchhhccCce
Confidence 346899999998665 2 34443332233378889999999988765543 33322101122333 2999
Q ss_pred EEEEEEEeCCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeeccCC
Q psy12396 270 HTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 270 H~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~~ 347 (348)
|+|+++.+-+.+.+.|||........ ......-....+-+|=.... .+.+.|||+.+-+.-+||+
T Consensus 1002 ~fVTItndlg~~~IYING~Li~~~~I--~~L~dI~ss~~I~fglvn~~-----------D~~~~i~Id~f~IfnkeLt 1066 (1290)
T 1epw_A 1002 FFVTITNNLNNAKIYINGKLESNTDI--KDIREVIANGEIIFKLDGDI-----------DRTQFIWMKYFSIFNTELS 1066 (1290)
T ss_dssp EEEEEEECSSEEEEEETTEEEEEEEC--SSCCCCCCCSEEEEEEEESC-----------CTTCCEEEEEEEEESSCCC
T ss_pred EEEEEEecCCceEEEECCEEeechhh--hhhhceeecceEEEEeccCC-----------CCCceeeEeeEEEecCcCC
Confidence 99999999889999999977322221 11112222333444322211 2568999999999999886
No 60
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A
Probab=91.95 E-value=3.7 Score=41.91 Aligned_cols=131 Identities=7% Similarity=0.043 Sum_probs=79.3
Q ss_pred cceEEEEEEEEeCCCC--------eEEEEEcCCCCeEEEEEECCEEEEEEECCCcc-eEEEEcCCCCeeec--CCcEEEE
Q psy12396 204 GREMELKMDVKPRNIS--------GLLLSVHSKKDYFILQMIDGSVKATVDNGKGP-ISAIYTPSDPYFFC--DGQWHTI 272 (348)
Q Consensus 204 ~~~~~i~~~frT~~~~--------Glll~~~~~~~~l~l~l~~G~l~~~~~~~~~~-~~~~~~~~s~~~~~--dg~wH~v 272 (348)
..++.|+|++|....+ -.|+-......=+.|++.++.+...+...+|. ..+.+.=.....+. -++||+|
T Consensus 937 ~~nFSIsFWvRipk~~~~~~~~neyTIIg~~~nNsGW~Is~~~n~LIWtl~Dsng~~k~I~f~y~~~~nisdyiNkW~fV 1016 (1295)
T 2nyy_A 937 YENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIFV 1016 (1295)
T ss_dssp TSEEEEEEEEECCCCCSGGGGGCCEEEEEEEETTEEEEEEEETTEEEEEEECSSSCEEEEEEECCSBSSSCSSTTSCEEE
T ss_pred cCceEEEEEEEcCCcccccccCCcceEEEeecCCCCcEEEECCCeEEEEEecCCCccceEEEecccccchhhccCceEEE
Confidence 3478999999974211 23442322233378888999999988765543 32322100122222 2999999
Q ss_pred EEEEe-CCEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeeccCC
Q psy12396 273 VAIKT-KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 273 ~v~~~-~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~~ 347 (348)
+|+.+ -+...+.|||........ .....+.....+-+| +.... .+.+.+||+.+-+.-+||+
T Consensus 1017 TITndRlgna~IYINGkLi~~~~I--~~l~nI~~sd~Isfk-~~g~n----------D~~~~i~Id~l~IfnkeLt 1079 (1295)
T 2nyy_A 1017 TITNNRLNNSKIYINGRLIDQKPI--SNLGNIHASNNIMFK-LDGCR----------DTHRYIWIKYFNLFDKELN 1079 (1295)
T ss_dssp EEEEETTSEEEEEETTEEEEEEEC--TTCCCCCCCSEEEEE-EESCC----------CTTCEEEEEEEEEESSCCC
T ss_pred EEEEcCCCceeEEECCEEeeccee--cccCCcccCceEEEE-eccCC----------CCccceeEeeEEEecCcCC
Confidence 99999 467799999977322222 122223344455554 22111 2468999999999999987
No 61
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=91.17 E-value=13 Score=38.18 Aligned_cols=147 Identities=13% Similarity=0.078 Sum_probs=87.7
Q ss_pred EeCCCCeeeEEecCCcC----cccceEEEEEEEEcCCCC-----C------eEEEEEecCCCCcEEEEEEeCcEEEEEEE
Q psy12396 6 IAGTSKSSRIEYPTITG----RFKNKFDFSIDIKTTSEQ-----D------GIIFYVADVKHIDYVALYVKDGQIHYSFN 70 (348)
Q Consensus 6 ~F~g~~~sy~~~~~~~~----~~~~~~~i~~~FrT~~~~-----~------GlLl~~~~~~~~~~l~l~L~~G~l~~~~~ 70 (348)
.+.|+..|-+.+..... .....++|+|+.|... - . -.|+=.-. ...-..+.+.++.+...+.
T Consensus 899 ~L~~~~~S~v~V~~~ndii~N~~~~nFSIsFWiRipk-~~~~~it~y~~nEyTiIg~~~--nNsGW~Isi~~n~lIWtl~ 975 (1290)
T 1epw_A 899 KLTSSANSKIRVTQNQNIIFNSVFLDFSVSFWIRIPK-YKNDGIQNYIHNEYTIINCMK--NNSGWKISIRGNRIIWTLI 975 (1290)
T ss_dssp EECSSTTCCEEEECCTTSSCCCSSCCEEEEEEEECCC-CCGGGHHHHHHCEEEEEEEEE--TTEEEEEEEETTEEEEEEE
T ss_pred EecCCCCcceeEecccchhhcccccceeEEEEEEcCC-ccccccccccCCCceEEEEec--CCCCcEEEECCCeEEEEEe
Confidence 34454446655533121 1345899999999976 4 1 34442222 2334677889999998888
Q ss_pred cCCCCceee--c--Cceeec--CCCcEEEEEEEeCcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceecc
Q psy12396 71 CGSGPMALS--S--GDKLIL--DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144 (348)
Q Consensus 71 ~g~~~~~~~--~--~~~~~~--dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~ 144 (348)
...|....+ . ....+. -++||.|.++.+.+.+.+.|||.........+-. .+.....+-+|=...
T Consensus 976 D~ng~~k~I~f~y~~~~nisdyiNkW~fVTItndlg~~~IYING~Li~~~~I~~L~-dI~ss~~I~fglvn~-------- 1046 (1290)
T 1epw_A 976 DINGKTKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIR-EVIANGEIIFKLDGD-------- 1046 (1290)
T ss_dssp CTTCCEEEEEEECCSSCSSCSSTTSCEEEEEEECSSEEEEEETTEEEEEEECSSCC-CCCCCSEEEEEEEES--------
T ss_pred cCCCcceeEEEecccccchhhccCceEEEEEEecCCceEEEECCEEeechhhhhhh-ceeecceEEEEeccC--------
Confidence 644422222 1 222333 2899999999999999999999875444332211 222233344431111
Q ss_pred CccccccceeeeeceEECCEEcC
Q psy12396 145 NLGLNDTFVGCLRNLKSNNKLVQ 167 (348)
Q Consensus 145 ~~~~~~~F~GCi~~l~in~~~~~ 167 (348)
..+++.++|+++.+=++++.
T Consensus 1047 ---~D~~~~i~Id~f~IfnkeLt 1066 (1290)
T 1epw_A 1047 ---IDRTQFIWMKYFSIFNTELS 1066 (1290)
T ss_dssp ---CCTTCCEEEEEEEEESSCCC
T ss_pred ---CCCCceeeEeeEEEecCcCC
Confidence 12458999999999777764
No 62
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A
Probab=90.67 E-value=5 Score=40.99 Aligned_cols=129 Identities=10% Similarity=0.049 Sum_probs=79.2
Q ss_pred cceEEEEEEEEcCCC------CC-eEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceee--c--Cceeec--CCCcE
Q psy12396 25 KNKFDFSIDIKTTSE------QD-GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS--S--GDKLIL--DGEWH 91 (348)
Q Consensus 25 ~~~~~i~~~FrT~~~------~~-GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~--~--~~~~~~--dg~Wh 91 (348)
...++|+|+.|...- .+ -.|+-.-. ...-..+.+.++.|...+....+....+ . ....+. -++||
T Consensus 937 ~~nFSIsFWvRipk~~~~~~~~neyTIIg~~~--nNsGW~Is~~~n~LIWtl~Dsng~~k~I~f~y~~~~nisdyiNkW~ 1014 (1295)
T 2nyy_A 937 YENFSTSFWIRIPKYFNSISLNNEYTIINCME--NNSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWI 1014 (1295)
T ss_dssp TSEEEEEEEEECCCCCSGGGGGCCEEEEEEEE--TTEEEEEEEETTEEEEEEECSSSCEEEEEEECCSBSSSCSSTTSCE
T ss_pred cCceEEEEEEEcCCcccccccCCcceEEEeec--CCCCcEEEECCCeEEEEEecCCCccceEEEecccccchhhccCceE
Confidence 458999999998530 11 24442222 2333677789999999888654422222 1 122222 28999
Q ss_pred EEEEEEe-CcEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeeeceEECCEEcC
Q psy12396 92 TVEFSRQ-QLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167 (348)
Q Consensus 92 ~v~v~~~-~~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in~~~~~ 167 (348)
.|.++.. .+...+.|||.........+ ...+.....+-+|-... ..+++.++|+++.+=++++.
T Consensus 1015 fVTITndRlgna~IYINGkLi~~~~I~~-l~nI~~sd~Isfk~~g~-----------nD~~~~i~Id~l~IfnkeLt 1079 (1295)
T 2nyy_A 1015 FVTITNNRLNNSKIYINGRLIDQKPISN-LGNIHASNNIMFKLDGC-----------RDTHRYIWIKYFNLFDKELN 1079 (1295)
T ss_dssp EEEEEEETTSEEEEEETTEEEEEEECTT-CCCCCCCSEEEEEEESC-----------CCTTCEEEEEEEEEESSCCC
T ss_pred EEEEEEcCCCceeEEECCEEeecceecc-cCCcccCceEEEEeccC-----------CCCccceeEeeEEEecCcCC
Confidence 9999999 58889999998754443332 22333344455442111 12458999999999777764
No 63
>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B
Probab=89.68 E-value=5.4 Score=39.70 Aligned_cols=81 Identities=11% Similarity=0.131 Sum_probs=57.3
Q ss_pred cceEEEEEEEEeCCCC---eEEEEEcCCCCeEEEEEECCEEEEEEECCCcc-eEEEEcCCCCeeecCCcEEEEEEEEe--
Q psy12396 204 GREMELKMDVKPRNIS---GLLLSVHSKKDYFILQMIDGSVKATVDNGKGP-ISAIYTPSDPYFFCDGQWHTIVAIKT-- 277 (348)
Q Consensus 204 ~~~~~i~~~frT~~~~---Glll~~~~~~~~l~l~l~~G~l~~~~~~~~~~-~~~~~~~~s~~~~~dg~wH~v~v~~~-- 277 (348)
..++.|+|++|....+ -.|+-......=..|++.++.+...+...+|. ..+- +. .+.+++||+|+++.+
T Consensus 901 tnnFSISFWVRipk~~~~eyTIIg~~~nNsGW~ISf~~n~LIWtl~DsnGn~knI~--f~---dy~~NkWyfITISvDRL 975 (1196)
T 3v0a_B 901 TNSFSIYFWLRNLGKDTIKSKLIGSKEDNCGWEIYFQDTGLVFNMIDSNGNEKNIY--LS---DVSNNSWHYITISVDRL 975 (1196)
T ss_dssp SCCEEEEEEEEECCCCCSCEEEEEEEETTEEEEEEEETTEEEEEEECTTCCEEEEE--EC---SCCSSSCEEEEEEEETT
T ss_pred ccceEEEEEEEcCCcCCccceEEEeecCCCCcEEEECCCeEEEEEEcCCCcccceE--ec---cccCCcEEEEEEEEcCC
Confidence 3578999999986543 34443332333378888999999988865554 3331 21 788999999999877
Q ss_pred CCEEEEEEcCCC
Q psy12396 278 KNVISVAVDSMT 289 (348)
Q Consensus 278 ~~~~~l~vD~~~ 289 (348)
++.+.+.|||..
T Consensus 976 GnalkIYINGkL 987 (1196)
T 3v0a_B 976 KEQLLIFIDDNL 987 (1196)
T ss_dssp TTEEEEEETTEE
T ss_pred CceeEEEECCEE
Confidence 456699999977
No 64
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=88.92 E-value=0.07 Score=42.86 Aligned_cols=81 Identities=7% Similarity=0.023 Sum_probs=48.4
Q ss_pred eEEEEEEEEeC-----CCCeEEEEEc-CCCCeEEEEEE--CCEEEEEEECCCcceEEEEcCCCCeeecCCcEEEEEEEEe
Q psy12396 206 EMELKMDVKPR-----NISGLLLSVH-SKKDYFILQMI--DGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKT 277 (348)
Q Consensus 206 ~~~i~~~frT~-----~~~Glll~~~-~~~~~l~l~l~--~G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~ 277 (348)
++.+++.++.. ...|++|... +..++..+.+. ++++.+.-........+ . ....++..|+||+++|...
T Consensus 44 df~le~~v~~~~~~~~~~~Gi~fR~~~d~~~~Y~~~i~~~~~~~~l~~~~~G~~~~l--~-~~~~~~~~g~w~~l~I~~~ 120 (172)
T 4azz_A 44 DFTYESDITIKDGNGRGAGALMFRSDKDAKNGYLANVDAKHDLVKFFKFENGAASVI--A-EYKTPIDVNKKYHLKTEAE 120 (172)
Confidence 34455555433 3457777663 33455555554 34454422111112222 1 2345678899999999999
Q ss_pred CCEEEEEEcCCC
Q psy12396 278 KNVISVAVDSMT 289 (348)
Q Consensus 278 ~~~~~l~vD~~~ 289 (348)
++.+++.|||..
T Consensus 121 G~~i~~~vnG~~ 132 (172)
T 4azz_A 121 GDRFKIYLDDRL 132 (172)
Confidence 999999999976
No 65
>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B
Probab=87.87 E-value=18 Score=36.17 Aligned_cols=103 Identities=15% Similarity=0.203 Sum_probs=65.9
Q ss_pred EeCCCCeeeEEecC--CcCcccceEEEEEEEEcCCCCC---eEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeec
Q psy12396 6 IAGTSKSSRIEYPT--ITGRFKNKFDFSIDIKTTSEQD---GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSS 80 (348)
Q Consensus 6 ~F~g~~~sy~~~~~--~~~~~~~~~~i~~~FrT~~~~~---GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~ 80 (348)
.|.|+ ..-+.++- ........++|+|+.|... -+ -.|+-.-. ...-..+.+.++.|...+....+....+-
T Consensus 881 ~L~gS-k~~I~l~NDii~N~ltnnFSISFWVRipk-~~~~eyTIIg~~~--nNsGW~ISf~~n~LIWtl~DsnGn~knI~ 956 (1196)
T 3v0a_B 881 YLNGS-NQSISFSNDFFENGLTNSFSIYFWLRNLG-KDTIKSKLIGSKE--DNCGWEIYFQDTGLVFNMIDSNGNEKNIY 956 (1196)
T ss_dssp EECSS-SCCEEEECGGGGCCSSCCEEEEEEEEECC-CCCSCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTCCEEEEE
T ss_pred EecCC-ceeEEcccchhhcccccceEEEEEEEcCC-cCCccceEEEeec--CCCCcEEEECCCeEEEEEEcCCCcccceE
Confidence 45554 44455532 1112345899999999966 33 34443332 23336677899999999886555233332
Q ss_pred CceeecCCCcEEEEEEEe--CcEEEEEECCeeeee
Q psy12396 81 GDKLILDGEWHTVEFSRQ--QLSGKLKIDGQVVAE 113 (348)
Q Consensus 81 ~~~~~~dg~Wh~v~v~~~--~~~~~l~vd~~~~~~ 113 (348)
.. .+.+++||.|.++.. +..+.+.|||.....
T Consensus 957 f~-dy~~NkWyfITISvDRLGnalkIYINGkLv~~ 990 (1196)
T 3v0a_B 957 LS-DVSNNSWHYITISVDRLKEQLLIFIDDNLVAN 990 (1196)
T ss_dssp EC-SCCSSSCEEEEEEEETTTTEEEEEETTEEEEE
T ss_pred ec-cccCCcEEEEEEEEcCCCceeEEEECCEEeec
Confidence 22 788899999998888 355599999987543
No 66
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=87.23 E-value=5.5 Score=38.97 Aligned_cols=80 Identities=18% Similarity=0.144 Sum_probs=52.8
Q ss_pred eEEEEEEEEeCC--CCe--EEEEEcCC------CCeEEEEEE-CCEEEEEEECCCcceEEEEcCCCCeeecCCcEEEEEE
Q psy12396 206 EMELKMDVKPRN--ISG--LLLSVHSK------KDYFILQMI-DGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVA 274 (348)
Q Consensus 206 ~~~i~~~frT~~--~~G--lll~~~~~------~~~l~l~l~-~G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v~v 274 (348)
+..|+..++-.. ..| +++....+ .....+.|. +|.+++.-..++ ...+. .....+..++||+++|
T Consensus 530 dytVs~Dv~~~~~~~g~a~i~~Rv~~~g~~~~~~~gy~~~i~~~G~~~l~~~~~~-~~vLa---~g~~~~~~~~w~~L~l 605 (656)
T 3zr5_A 530 NMTVQCDVYIETPRSGGVFIAGRVNKGGILIRSATGVFFWIFANGSYRVTADLGG-WITYA---SGHADVTAKRWYTLTL 605 (656)
T ss_dssp EEEEEEEEEECSTTTCEEEEEEEECCCGGGGGGCEEEEEEEETTTEEEEEEETTC-CSEEE---EEECSCCTTCEEEEEE
T ss_pred cEEEEEEEEeccCCCCcEEEEEEEcCCCCCccccceEEEEEEcCCEEEEEEecCC-eEEEE---EEEecCCCCceEEEEE
Confidence 355666666554 344 34443321 224555555 899999766544 33331 1223789999999999
Q ss_pred EEeCCEEEEEEcCCC
Q psy12396 275 IKTKNVISVAVDSMT 289 (348)
Q Consensus 275 ~~~~~~~~l~vD~~~ 289 (348)
...++.++..|||+.
T Consensus 606 ~~~G~~i~~~ldG~~ 620 (656)
T 3zr5_A 606 GIKGYFAFGMLNGTI 620 (656)
T ss_dssp EEETTEEEEEETTEE
T ss_pred EEECCEEEEEECCEE
Confidence 999999999999977
No 67
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=86.65 E-value=0.044 Score=50.95 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=32.6
Q ss_pred CCCCCeEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCC
Q psy12396 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSG 74 (348)
Q Consensus 37 ~~~~~GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~ 74 (348)
.+ ++|+++|.++....+|++|+|.+|++.+.++.|+.
T Consensus 364 ~~-~~G~cl~~~~~~~~d~ial~l~~G~v~~syd~G~~ 400 (423)
T 2gy5_A 364 VK-PDGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVW 400 (423)
T ss_dssp EC-TTSCEECCSEEEECSSCEEEECCEEEECGGGCEEE
T ss_pred EC-CCeEEEeCCCcCcccceeeeEEeeeEEEeecCCCc
Confidence 47 89999998876567999999999999999998866
No 68
>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A
Probab=86.32 E-value=18 Score=32.45 Aligned_cols=128 Identities=13% Similarity=0.119 Sum_probs=77.6
Q ss_pred ccceEEEEEEEEcCCCCCe--------EEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeec-------CceeecCC
Q psy12396 24 FKNKFDFSIDIKTTSEQDG--------IIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSS-------GDKLILDG 88 (348)
Q Consensus 24 ~~~~~~i~~~FrT~~~~~G--------lLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~-------~~~~~~dg 88 (348)
....++++|++|... -+- .+.=.-+ ....-..+.|+++.+.....-..+....+. ....+. |
T Consensus 65 ~~~nfSiSFWvRi~k-~~~~~nl~n~ytii~~wp-~NNwGW~i~~~~n~~iWtliD~ng~~~~i~fry~~~~~~~dyi-n 141 (413)
T 3rsj_A 65 RYQNFSISFWVRIPK-YFNKVNLNNEYTIIDCIR-NNNSGWKISLNYNKIIWTLQDTAGNNQKLVFNYTQMISISDYI-N 141 (413)
T ss_dssp SSCCEEEEEEEECCC-CCSGGGTTCCEEEEEEEE-TTTEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBSSSCSST-T
T ss_pred cccceEEEEEEEcCC-cccccccccccceeccee-ccCccceEEecCCceEEEEEcCCCCeeEEEEeecccCCccccc-c
Confidence 457899999999977 321 1111111 134457888998888877665444233332 112334 9
Q ss_pred CcEEEEEEEeC-cEEEEEECCeeeeeeeecCCCccccccCCeEEeccCCCCcceeccCccccccceeeeeceEECCEEcC
Q psy12396 89 EWHTVEFSRQQ-LSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167 (348)
Q Consensus 89 ~Wh~v~v~~~~-~~~~l~vd~~~~~~~~~~~~~~~l~~~~~~~iGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in~~~~~ 167 (348)
.|++|.++... +...|.|++......... ..........+.+|.... ..++.|||+++.+=++.+.
T Consensus 142 ~W~hVTIT~drlg~~~IYINGklv~~~~i~-~L~~I~~sn~I~fg~~~~------------~~~~n~~Idd~~IfdKeLt 208 (413)
T 3rsj_A 142 KWIFVTITNNRLGNSRIYINGNLIDEKSIS-NLGDIHVSDNILFKIVGC------------NDTRYVGIRYFKVFDTELG 208 (413)
T ss_dssp SEEEEEEEECTTSEEEEEETTEEEEEEECT-TCCCCCCCSEEEEEEESC------------CSSCEEEEEEEEEESSCCC
T ss_pred ceEEEEEEecCCCCeeEEECCEEecceehh-hccccccccceEEeeecc------------cCcceEEEEEEEEEcccCC
Confidence 99999999874 456899999885443333 222222334555553221 2248899999999777664
No 69
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=86.25 E-value=0.14 Score=41.01 Aligned_cols=86 Identities=12% Similarity=0.109 Sum_probs=51.3
Q ss_pred cceEEEEEEEEcCC----CCCeEEEEEecCCCCcEEEEEEe--CcEEEEEEE-cCCCCceeecCceeecCCCcEEEEEEE
Q psy12396 25 KNKFDFSIDIKTTS----EQDGIIFYVADVKHIDYVALYVK--DGQIHYSFN-CGSGPMALSSGDKLILDGEWHTVEFSR 97 (348)
Q Consensus 25 ~~~~~i~~~FrT~~----~~~GlLl~~~~~~~~~~l~l~L~--~G~l~~~~~-~g~~~~~~~~~~~~~~dg~Wh~v~v~~ 97 (348)
...+.+++.++... ..-|++|.... +...+..+.+. ++++.+.-. .|.. ........++..++||+++|..
T Consensus 42 ~~df~le~~v~~~~~~~~~~~Gi~fR~~~-d~~~~Y~~~i~~~~~~~~l~~~~~G~~-~~l~~~~~~~~~g~w~~l~I~~ 119 (172)
T 4azz_A 42 GSDFTYESDITIKDGNGRGAGALMFRSDK-DAKNGYLANVDAKHDLVKFFKFENGAA-SVIAEYKTPIDVNKKYHLKTEA 119 (172)
Confidence 45666777666542 03466666533 23344444444 344554322 2222 1222345567899999999999
Q ss_pred eCcEEEEEECCeeee
Q psy12396 98 QQLSGKLKIDGQVVA 112 (348)
Q Consensus 98 ~~~~~~l~vd~~~~~ 112 (348)
.+..+.+.||+....
T Consensus 120 ~G~~i~~~vnG~~v~ 134 (172)
T 4azz_A 120 EGDRFKIYLDDRLVI 134 (172)
Confidence 999999999996643
No 70
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=85.44 E-value=14 Score=36.17 Aligned_cols=88 Identities=13% Similarity=0.170 Sum_probs=58.2
Q ss_pred cceEEEEEEEEcCCCCCeE--EEEEecCCC-----CcEEEEE-EeCcEEEEEEEcCCCCceeecCceeecCCCcEEEEEE
Q psy12396 25 KNKFDFSIDIKTTSEQDGI--IFYVADVKH-----IDYVALY-VKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFS 96 (348)
Q Consensus 25 ~~~~~i~~~FrT~~~~~Gl--Ll~~~~~~~-----~~~l~l~-L~~G~l~~~~~~g~~~~~~~~~~~~~~dg~Wh~v~v~ 96 (348)
+....++..++-...+.|- |....+..+ ..+..+. ..+|.+.+.-+.+.. .........+..++||++.|.
T Consensus 528 WtdytVs~Dv~~~~~~~g~a~i~~Rv~~~g~~~~~~~gy~~~i~~~G~~~l~~~~~~~-~vLa~g~~~~~~~~w~~L~l~ 606 (656)
T 3zr5_A 528 WTNMTVQCDVYIETPRSGGVFIAGRVNKGGILIRSATGVFFWIFANGSYRVTADLGGW-ITYASGHADVTAKRWYTLTLG 606 (656)
T ss_dssp CCEEEEEEEEEECSTTTCEEEEEEEECCCGGGGGGCEEEEEEEETTTEEEEEEETTCC-SEEEEEECSCCTTCEEEEEEE
T ss_pred cccEEEEEEEEeccCCCCcEEEEEEEcCCCCCccccceEEEEEEcCCEEEEEEecCCe-EEEEEEEecCCCCceEEEEEE
Confidence 5667788888776611333 332222211 1234444 459999998776543 333344458999999999999
Q ss_pred EeCcEEEEEECCeeeee
Q psy12396 97 RQQLSGKLKIDGQVVAE 113 (348)
Q Consensus 97 ~~~~~~~l~vd~~~~~~ 113 (348)
..+..++..||+.....
T Consensus 607 ~~G~~i~~~ldG~~v~~ 623 (656)
T 3zr5_A 607 IKGYFAFGMLNGTILWK 623 (656)
T ss_dssp EETTEEEEEETTEEEEE
T ss_pred EECCEEEEEECCEEEEE
Confidence 99999999999987543
No 71
>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A
Probab=80.11 E-value=33 Score=30.80 Aligned_cols=129 Identities=5% Similarity=0.053 Sum_probs=75.8
Q ss_pred cceEEEEEEEEeCCCCe--------EEEEEc-CCCCeEEEEEECCEEEEEEECCCc-ceEEEEc--CC-CCeeecCCcEE
Q psy12396 204 GREMELKMDVKPRNISG--------LLLSVH-SKKDYFILQMIDGSVKATVDNGKG-PISAIYT--PS-DPYFFCDGQWH 270 (348)
Q Consensus 204 ~~~~~i~~~frT~~~~G--------lll~~~-~~~~~l~l~l~~G~l~~~~~~~~~-~~~~~~~--~~-s~~~~~dg~wH 270 (348)
...+.++|.+|-.+-.- .+.-.- ...-=..|+++++.+..+.-..++ ...+.+. .. ....+- |.|+
T Consensus 66 ~~nfSiSFWvRi~k~~~~~nl~n~ytii~~wp~NNwGW~i~~~~n~~iWtliD~ng~~~~i~fry~~~~~~~dyi-n~W~ 144 (413)
T 3rsj_A 66 YQNFSISFWVRIPKYFNKVNLNNEYTIIDCIRNNNSGWKISLNYNKIIWTLQDTAGNNQKLVFNYTQMISISDYI-NKWI 144 (413)
T ss_dssp SCCEEEEEEEECCCCCSGGGTTCCEEEEEEEETTTEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBSSSCSST-TSEE
T ss_pred ccceEEEEEEEcCCcccccccccccceecceeccCccceEEecCCceEEEEEcCCCCeeEEEEeecccCCccccc-cceE
Confidence 45688999999765421 122111 123446889998888776655443 3333221 10 112234 9999
Q ss_pred EEEEEEeC-CEEEEEEcCCCcccccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCceeeccCC
Q psy12396 271 TIVAIKTK-NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPLT 347 (348)
Q Consensus 271 ~v~v~~~~-~~~~l~vD~~~~~~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~~~~~~~~ 347 (348)
+|++..++ +...|.|+|.....+.. ...........+.+|..-.. ..+.|||+++.+-=++|+
T Consensus 145 hVTIT~drlg~~~IYINGklv~~~~i--~~L~~I~~sn~I~fg~~~~~------------~~~n~~Idd~~IfdKeLt 208 (413)
T 3rsj_A 145 FVTITNNRLGNSRIYINGNLIDEKSI--SNLGDIHVSDNILFKIVGCN------------DTRYVGIRYFKVFDTELG 208 (413)
T ss_dssp EEEEEECTTSEEEEEETTEEEEEEEC--TTCCCCCCCSEEEEEEESCC------------SSCEEEEEEEEEESSCCC
T ss_pred EEEEEecCCCCeeEEECCEEecceeh--hhccccccccceEEeeeccc------------CcceEEEEEEEEEcccCC
Confidence 99999874 34689999987322222 11122223355666544433 258899999998888876
No 72
>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=75.15 E-value=9.7 Score=31.08 Aligned_cols=88 Identities=23% Similarity=0.392 Sum_probs=50.0
Q ss_pred cceEEEEEEEEcCCC-CCeEEEEEecCCCCc---EEEEEEeCcEEE------EEEEcCCCCceeec-Cceeec-CCCcEE
Q psy12396 25 KNKFDFSIDIKTTSE-QDGIIFYVADVKHID---YVALYVKDGQIH------YSFNCGSGPMALSS-GDKLIL-DGEWHT 92 (348)
Q Consensus 25 ~~~~~i~~~FrT~~~-~~GlLl~~~~~~~~~---~l~l~L~~G~l~------~~~~~g~~~~~~~~-~~~~~~-dg~Wh~ 92 (348)
...+.+.++||.... .+|+.|..... ... -..++|.+..-. -.-..|+-...... ...... .|+|.+
T Consensus 46 y~dF~L~~e~k~~~~~NSGI~~r~~~~-~~~~~~G~EvQild~~~~~~~~~~~~~~~GslY~~~~~~~~~~~kp~GeWN~ 124 (201)
T 3imm_A 46 YENFELDLDFKTDVGTNSGVVVYCTDT-KDWIPNSVEIQIADDHCEKWGNGKPYEKCGAIYGHLGAVQDKVVKKPGEWNH 124 (201)
T ss_dssp BCSEEEEEEEEECTTCEEEEEEEESCS-SSCTTSSEEEEEECTTCCTTTTCCGGGSTTSBTTTBCCSSSCCSCCTTSEEE
T ss_pred eccEEEEEEEEECCCCccEEEEEecCC-CCCcCcEEEEEEEcCCCCccccCCCCCceEeeccccCccccccCCCCCeeEE
Confidence 467889999998642 35666555432 211 135555443210 00001110000011 122333 799999
Q ss_pred EEEEEeCcEEEEEECCeeeee
Q psy12396 93 VEFSRQQLSGKLKIDGQVVAE 113 (348)
Q Consensus 93 v~v~~~~~~~~l~vd~~~~~~ 113 (348)
.+|...+.++++.+|+..+..
T Consensus 125 ~~I~~~g~~i~v~lNG~~V~~ 145 (201)
T 3imm_A 125 MRIKCAGQHIMVILNGKKVTE 145 (201)
T ss_dssp EEEEEETTEEEEEETTEEEEE
T ss_pred EEEEEECCEEEEEECCEEEEE
Confidence 999999999999999988654
No 73
>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis}
Probab=70.83 E-value=13 Score=30.61 Aligned_cols=89 Identities=16% Similarity=0.337 Sum_probs=50.2
Q ss_pred cceEEEEEEEEcCCC-CCeEEEEEecCCCCc---EEEEEEeCcEE------EEEEEcCCCCceeec-Cceee-cCCCcEE
Q psy12396 25 KNKFDFSIDIKTTSE-QDGIIFYVADVKHID---YVALYVKDGQI------HYSFNCGSGPMALSS-GDKLI-LDGEWHT 92 (348)
Q Consensus 25 ~~~~~i~~~FrT~~~-~~GlLl~~~~~~~~~---~l~l~L~~G~l------~~~~~~g~~~~~~~~-~~~~~-~dg~Wh~ 92 (348)
...+.+.++||.... .+|+.|..... ... -..++|.++.- .-.-..|+-...... ..... ..|+|.+
T Consensus 59 y~dF~L~lE~k~~~~~NSGI~~r~~~~-~~~~~~G~EvQIlD~~~~~~~~~~~~~~~GslY~~~~~~~~~~~kp~GeWN~ 137 (214)
T 3s5q_A 59 YENFILDLEFKTDVNTNSGVVIYCTDK-GNWIPSSIEIQIADDHHPEWQSYPEYWRCGSIYGHKGANEQLVVKKPGEWNR 137 (214)
T ss_dssp BCSEEEEEEEEECTTCEEEEEEEESCS-TTCGGGSEEEEEECTTSGGGGGSCGGGSTTSBTTTBCCSSSCCSCCTTSEEE
T ss_pred eccEEEEEEEEECCCCccEEEEEecCC-CCCcccEEEEEEecCCCCcccccCCCCceEeeccccCcccccccCCCCccEE
Confidence 568889999998642 35666655442 221 13455544310 000001110000111 22233 3799999
Q ss_pred EEEEEeCcEEEEEECCeeeeee
Q psy12396 93 VEFSRQQLSGKLKIDGQVVAEG 114 (348)
Q Consensus 93 v~v~~~~~~~~l~vd~~~~~~~ 114 (348)
.+|...+..+++.+|+..+...
T Consensus 138 ~~I~~~g~~i~v~lNG~~V~~~ 159 (214)
T 3s5q_A 138 MIITAKGQQIDIELNGKHIVSA 159 (214)
T ss_dssp EEEEEETTEEEEEETTEEEEEE
T ss_pred EEEEEECCEEEEEECCEEEEEE
Confidence 9999999999999999886543
No 74
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=70.44 E-value=0.46 Score=44.03 Aligned_cols=39 Identities=18% Similarity=0.127 Sum_probs=32.5
Q ss_pred CCCCeEEEEEcC--CCCeEEEEEECCEEEEEEECCCcceEE
Q psy12396 216 RNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPISA 254 (348)
Q Consensus 216 ~~~~Glll~~~~--~~~~l~l~l~~G~l~~~~~~~~~~~~~ 254 (348)
.+++|++++..+ ..+|++|+|.+|++.+++++|.....+
T Consensus 364 ~~~~G~cl~~~~~~~~d~ial~l~~G~v~~syd~G~~~~~v 404 (423)
T 2gy5_A 364 VKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVCSV 404 (423)
T ss_dssp ECTTSCEECCSEEEECSSCEEEECCEEEECGGGCEEEEEEE
T ss_pred ECCCeEEEeCCCcCcccceeeeEEeeeEEEeecCCCcceEE
Confidence 578999998764 589999999999999999887665554
No 75
>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum}
Probab=68.49 E-value=1e+02 Score=31.61 Aligned_cols=86 Identities=7% Similarity=0.114 Sum_probs=58.7
Q ss_pred cceEEEEEEEEeCCCC---------eEEEEEc-CCCCeEEEEEECCEEEEEEECCCcc-eEE--EEcCC-CCeeecCCcE
Q psy12396 204 GREMELKMDVKPRNIS---------GLLLSVH-SKKDYFILQMIDGSVKATVDNGKGP-ISA--IYTPS-DPYFFCDGQW 269 (348)
Q Consensus 204 ~~~~~i~~~frT~~~~---------Glll~~~-~~~~~l~l~l~~G~l~~~~~~~~~~-~~~--~~~~~-s~~~~~dg~w 269 (348)
...+.|+|++|..+.+ -.|.-.. ....=+.|+++++.+...+...+|. ..+ .+... +-..+. ++|
T Consensus 912 ~~nFSIsFWiRipk~~~~~in~~nEytII~~~~~nNsGWkI~l~~n~iiwtl~D~ngn~k~i~f~y~~~~~isdyi-NkW 990 (1252)
T 3ffz_A 912 YKNFSISFWVRIPNYDNKIVNVNNEYTIINCMRDNNSGWKVSLNHNEIIWTLQDNAGINQKLAFNYGNANGISDYI-NKW 990 (1252)
T ss_dssp CCCCEEEEEEECCCCCSTTTCCCCCEEEEEEEETTTEEEEEEEETTEEEEEEECSSSCEEEEEEECCCCSBCCSST-TSC
T ss_pred ccceeEEEEEEcCCcCccccccCCceeEEeeccCCCCCcEEEEecCeEEEEEEeCCCCeeeEEEecccccchhhhh-cce
Confidence 4568999999986553 3444333 4566789999999999998766553 333 22211 111233 899
Q ss_pred EEEEEEEeC-CEEEEEEcCCCc
Q psy12396 270 HTIVAIKTK-NVISVAVDSMTT 290 (348)
Q Consensus 270 H~v~v~~~~-~~~~l~vD~~~~ 290 (348)
|.|++.-++ +...+.+||...
T Consensus 991 ~fITITnnRL~~~~IyINg~Li 1012 (1252)
T 3ffz_A 991 IFVTITNDRLGDSKLYINGNLI 1012 (1252)
T ss_dssp EEEEEEECTTSEEEEEETTEEE
T ss_pred EEEEEEeccCccceEEECCEEe
Confidence 999999886 556899999873
No 76
>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum}
Probab=67.69 E-value=96 Score=31.98 Aligned_cols=87 Identities=14% Similarity=0.148 Sum_probs=59.9
Q ss_pred cceEEEEEEEEcCCCCC--eEEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeecCceeecCCCcEEEEEEEeC--c
Q psy12396 25 KNKFDFSIDIKTTSEQD--GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQ--L 100 (348)
Q Consensus 25 ~~~~~i~~~FrT~~~~~--GlLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~~~~~~dg~Wh~v~v~~~~--~ 100 (348)
...++++|+.|... .+ ..-+... .....-..+.|+++.+.+.+....|....+.-... -.++||-|+++.+. +
T Consensus 898 y~nFSISFWiRi~k-~~~~~~~iI~~-~~nNSGWkIsl~~n~IIwtLqD~ngn~k~i~fs~~-i~NkW~FVTITnnRL~~ 974 (1196)
T 3vuo_A 898 TNNFTICFWLRFTG-KDDDKTRLIGN-KVNNCGWEIYFEDNGLVFEIIDSNGNQESVYLSNV-INNNWYYISISVDRLKD 974 (1196)
T ss_dssp SCCEEEEEEEEECC-CCSSCEEEEEE-ECSSCEEEEEEETTEEEEEEECTTCCEEEEEECSC-TTSCCEEEEEEEETTTT
T ss_pred ccceeEEEEEEccC-CCCCceeEeee-cccCCCcEEEEeCCcEEEEEEecCCceeeEEEeEe-ecceEEEEEEEecccCc
Confidence 57799999999876 32 2222211 12456789999999999998876653344433222 33899999999774 7
Q ss_pred EEEEEECCeeeeee
Q psy12396 101 SGKLKIDGQVVAEG 114 (348)
Q Consensus 101 ~~~l~vd~~~~~~~ 114 (348)
.+.+.|+|......
T Consensus 975 s~~IYING~Li~~~ 988 (1196)
T 3vuo_A 975 QLLIFINDKNVANV 988 (1196)
T ss_dssp EEEEEETTEEEEEE
T ss_pred eeEEEECCEEecch
Confidence 88999999885443
No 77
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis}
Probab=67.17 E-value=16 Score=30.65 Aligned_cols=91 Identities=12% Similarity=0.118 Sum_probs=52.3
Q ss_pred cceEEEEEEEEcCCC-CCeEEEEEecCCC--C---cEEEEEEeCcEEEE------------EEEcCCCCcee-ecCceee
Q psy12396 25 KNKFDFSIDIKTTSE-QDGIIFYVADVKH--I---DYVALYVKDGQIHY------------SFNCGSGPMAL-SSGDKLI 85 (348)
Q Consensus 25 ~~~~~i~~~FrT~~~-~~GlLl~~~~~~~--~---~~l~l~L~~G~l~~------------~~~~g~~~~~~-~~~~~~~ 85 (348)
...+.|.++||...- .+|+.|+...... . .-..++|.|+.-.- .-..|+-.... .......
T Consensus 78 y~dF~L~lE~k~~~~~NSGI~~~~~~~~~~~~~~~~G~EvQIlD~~~~~~~~~~~~~~~~~~~~~GslY~~~~p~~~~~~ 157 (236)
T 3u1x_A 78 YHNFQIKWDWKIGAQGNSGFLYHVQEGPKYKAPFETGPEYQLIDDDNYPWVSETGKEGLEDWQKTGCNYAMYVPETKQVN 157 (236)
T ss_dssp ESSEEEEEEEEECTTCEEEEEEEECCSTTCSCGGGTSCEEEEECTTCCCCBCTTSCBSCCGGGSTTCBTTTBCCSSCCCC
T ss_pred cccEEEEEEEEeCCCCCcEEEEEecCCccccccccceEEEEEecCCCCCccccccccccCccccccccccccCCccccCC
Confidence 467889999998642 4666666543211 1 11566665432100 00011100000 1112345
Q ss_pred cCCCcEEEEEEEeCcEEEEEECCeeeeeee
Q psy12396 86 LDGEWHTVEFSRQQLSGKLKIDGQVVAEGE 115 (348)
Q Consensus 86 ~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~ 115 (348)
..|+|.+.+|...+..+++.||+..+....
T Consensus 158 p~geWN~~~I~~~g~~i~v~lNG~~V~~~~ 187 (236)
T 3u1x_A 158 PPGEWNSSMVLYKDGYVEHWLNGEKLFSFQ 187 (236)
T ss_dssp CTTSCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred CCCceEEEEEEEECCEEEEEECCEEEEEEe
Confidence 679999999999999999999998865443
No 78
>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum}
Probab=65.42 E-value=73 Score=32.81 Aligned_cols=82 Identities=7% Similarity=0.095 Sum_probs=57.1
Q ss_pred cceEEEEEEEEeCCCC---eEEEEEcCCCCeEEEEEECCEEEEEEECCCcce-EEEEcCCCCeeecCCcEEEEEEEEeC-
Q psy12396 204 GREMELKMDVKPRNIS---GLLLSVHSKKDYFILQMIDGSVKATVDNGKGPI-SAIYTPSDPYFFCDGQWHTIVAIKTK- 278 (348)
Q Consensus 204 ~~~~~i~~~frT~~~~---Glll~~~~~~~~l~l~l~~G~l~~~~~~~~~~~-~~~~~~~s~~~~~dg~wH~v~v~~~~- 278 (348)
...+.|+|++|..+.+ -.+.-......=+.|+|+++.+..++...+|.. .+. + +. .-..+||.|++.-++
T Consensus 898 y~nFSISFWiRi~k~~~~~~~iI~~~~nNSGWkIsl~~n~IIwtLqD~ngn~k~i~--f--s~-~i~NkW~FVTITnnRL 972 (1196)
T 3vuo_A 898 TNNFTICFWLRFTGKDDDKTRLIGNKVNNCGWEIYFEDNGLVFEIIDSNGNQESVY--L--SN-VINNNWYYISISVDRL 972 (1196)
T ss_dssp SCCEEEEEEEEECCCCSSCEEEEEEECSSCEEEEEEETTEEEEEEECTTCCEEEEE--E--CS-CTTSCCEEEEEEEETT
T ss_pred ccceeEEEEEEccCCCCCceeEeeecccCCCcEEEEeCCcEEEEEEecCCceeeEE--E--eE-eecceEEEEEEEeccc
Confidence 3568999999987533 112222224567889999999999988766543 332 2 22 233899999998775
Q ss_pred -CEEEEEEcCCCc
Q psy12396 279 -NVISVAVDSMTT 290 (348)
Q Consensus 279 -~~~~l~vD~~~~ 290 (348)
+.+.+.++|...
T Consensus 973 ~~s~~IYING~Li 985 (1196)
T 3vuo_A 973 KDQLLIFINDKNV 985 (1196)
T ss_dssp TTEEEEEETTEEE
T ss_pred CceeEEEECCEEe
Confidence 788999999773
No 79
>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} PDB: 3azw_A 3azv_A 3n7m_A 4fvv_A* 3n7k_A 3r4s_A* 3r4u_A
Probab=64.74 E-value=78 Score=28.23 Aligned_cols=86 Identities=3% Similarity=0.125 Sum_probs=57.7
Q ss_pred ccceEEEEEEEEeCCCCe-----EEEEEcCCCCeEEEEEECCEEEEEEECCCcc-eEEEEc--C-CCCeeecCCcEEEEE
Q psy12396 203 VGREMELKMDVKPRNISG-----LLLSVHSKKDYFILQMIDGSVKATVDNGKGP-ISAIYT--P-SDPYFFCDGQWHTIV 273 (348)
Q Consensus 203 ~~~~~~i~~~frT~~~~G-----lll~~~~~~~~l~l~l~~G~l~~~~~~~~~~-~~~~~~--~-~s~~~~~dg~wH~v~ 273 (348)
....+.|+|++|..+.+- .|.-......=+.++++++.+.+++...++. ..+.+. . .....+ .+||.|+
T Consensus 69 my~nFSIsFWiRi~k~~~n~~nytII~~~~nNsGWkI~~~~n~iiwtL~D~ngn~k~i~fsY~~~~~isdy--NkW~fIT 146 (424)
T 3n7l_A 69 MYESFSISFWIRINKWVSNLPGYTIIDSVKNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGY--NKWFFVT 146 (424)
T ss_dssp TTTEEEEEEEEEEETCCTTCCCEEEEEEESSSCEEEEEEETTEEEEEEEEETTEEEEEEEECCGGGCTTCC--CSCEEEE
T ss_pred cccceEEEEEEEccccccCCCccEEEeeecCCCceEEEEecCcEEEEEEeCCCCeEEEEEecccccccccc--ccEEEEE
Confidence 345789999999765332 3443334567789999999999988765543 333221 1 122234 8999999
Q ss_pred EEEeC-CEEEEEEcCCCc
Q psy12396 274 AIKTK-NVISVAVDSMTT 290 (348)
Q Consensus 274 v~~~~-~~~~l~vD~~~~ 290 (348)
+.-++ +...+.++|...
T Consensus 147 ITnnrl~n~~IyINg~Li 164 (424)
T 3n7l_A 147 ITTNMMGNMMIYINGKLI 164 (424)
T ss_dssp EEEETTSEEEEEETTEEE
T ss_pred EEccccccceEEECCEEe
Confidence 98886 556899999773
No 80
>2vxr_A Botulinum neurotoxin type G; hydrolase, ganglioside, protease, recepto secreted, binding domain, metalloprotease; 1.90A {Clostridium botulinum} PDB: 3mpp_G
Probab=63.00 E-value=90 Score=28.38 Aligned_cols=87 Identities=9% Similarity=0.111 Sum_probs=57.5
Q ss_pred cceEEEEEEEEeCCC-----C------eEEEEEcCCCCeEEEEEECCEEEEEEECCCcc-eEEEEcCCCCeeecC--CcE
Q psy12396 204 GREMELKMDVKPRNI-----S------GLLLSVHSKKDYFILQMIDGSVKATVDNGKGP-ISAIYTPSDPYFFCD--GQW 269 (348)
Q Consensus 204 ~~~~~i~~~frT~~~-----~------Glll~~~~~~~~l~l~l~~G~l~~~~~~~~~~-~~~~~~~~s~~~~~d--g~w 269 (348)
...+.|+|++|..+. . -.|.-......=+.|+++.+++..++...++. ..+.++-.-...++| .+|
T Consensus 113 y~nFSIsFWlRipk~~~~~i~~y~~nEytII~~~~nNsGWkIsl~~n~iIwtL~D~ngn~k~I~f~Y~~~~~isDyiNkW 192 (482)
T 2vxr_A 113 FDNFSINFWVRTPKYNNNDIQTYLQNEYTIISCIKNDSGWKVSIKGNRIIWTLIDVNAKSKSIFFEYSIKDNISDYINKW 192 (482)
T ss_dssp SCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEEECCSCCSSCSSTTSC
T ss_pred ccceEEEEEEEcCCcccchhhcccCCceEEEEEecCCCccEEEEecCcEEEEEEeCCCCeeEEEEecccccchhhhhcce
Confidence 356899999998665 1 33442222355678999999999998766553 333222111222332 899
Q ss_pred EEEEEEEeC-CEEEEEEcCCCc
Q psy12396 270 HTIVAIKTK-NVISVAVDSMTT 290 (348)
Q Consensus 270 H~v~v~~~~-~~~~l~vD~~~~ 290 (348)
|.|++.-++ +...|.|+|...
T Consensus 193 ~fVTITnnRL~n~~IYINg~Li 214 (482)
T 2vxr_A 193 FSITITNDRLGNANIYINGSLK 214 (482)
T ss_dssp EEEEEEECTTSEEEEEETTEEE
T ss_pred EEEEEEccccccceEEECCEEe
Confidence 999999886 456899999873
No 81
>3h3l_A Putative sugar hydrolase; YP_001304206.1, structural genomic center for structural genomics, JCSG; HET: MSE; 1.59A {Parabacteroides distasonis atcc 8503}
Probab=62.40 E-value=41 Score=28.20 Aligned_cols=91 Identities=12% Similarity=0.114 Sum_probs=51.0
Q ss_pred cceEEEEEEEEcCCC-CCeEEEEEecCCCCc----EEEEEEeCcEEEEEEEc------CCCCceeec--Cce-eecCCCc
Q psy12396 25 KNKFDFSIDIKTTSE-QDGIIFYVADVKHID----YVALYVKDGQIHYSFNC------GSGPMALSS--GDK-LILDGEW 90 (348)
Q Consensus 25 ~~~~~i~~~FrT~~~-~~GlLl~~~~~~~~~----~l~l~L~~G~l~~~~~~------g~~~~~~~~--~~~-~~~dg~W 90 (348)
...+.+.++||.... .+|+.|......... -..++|.++.-.-.... ..+....+. ... ....|+|
T Consensus 76 f~dF~L~lE~k~~~~~NSGI~~r~~~~~~~~~~~~G~EvQIlD~~~~p~~~~g~~~~~~~GslY~~~~~~~~~~kp~GeW 155 (241)
T 3h3l_A 76 FKNFVFEIEWKIDKAGNSGIFYTAQEIEGTPIYYSSPEYQLLDNENMPDAWEGCDGNRQAGAVYDMIMPDPQPVKPYGNW 155 (241)
T ss_dssp BSSEEEEEEEEECBTCEEEEEEEECCCTTSCGGGSSCEEEEECTTTCGGGSSSSTTTTSTTSBTTTBCCSSCCCCCTTSC
T ss_pred cccEEEEEEEEeCCCCCceEEEEecCCCCCcCCCceEEEEEecCCCCCcccccCCCCCceeeecccccCccccCCCCCcc
Confidence 467889999998642 466666654422111 24555544310000000 011001111 112 3447999
Q ss_pred EEEEEEEeCcEEEEEECCeeeeeee
Q psy12396 91 HTVEFSRQQLSGKLKIDGQVVAEGE 115 (348)
Q Consensus 91 h~v~v~~~~~~~~l~vd~~~~~~~~ 115 (348)
.+.+|+..+..+++.||+..+....
T Consensus 156 Nt~~I~v~g~~v~v~lNG~~V~~~~ 180 (241)
T 3h3l_A 156 NKTRIVVYNQRVIHYMNDVKILEFQ 180 (241)
T ss_dssp EEEEEEEETTEEEEEETTEEEEEEE
T ss_pred eEEEEEEECCEEEEEECCEEEEEEE
Confidence 9999999999999999998865443
No 82
>2vu9_A Botulinum neurotoxin A heavy chain; hydrolase, metalloprotease, ganglioside, metal-B toxin, protease, membrane, receptor, secreted; HET: BGC GAL SIA NGA; 1.6A {Clostridium botulinum} PDB: 2vua_A 3fuo_A
Probab=59.17 E-value=1e+02 Score=27.80 Aligned_cols=86 Identities=6% Similarity=0.078 Sum_probs=56.4
Q ss_pred cceEEEEEEEEeCCCC--------eEEEEEcCCCCeEEEEEECCEEEEEEECCCcc-eEE--EEcCCCCe-eecCCcEEE
Q psy12396 204 GREMELKMDVKPRNIS--------GLLLSVHSKKDYFILQMIDGSVKATVDNGKGP-ISA--IYTPSDPY-FFCDGQWHT 271 (348)
Q Consensus 204 ~~~~~i~~~frT~~~~--------Glll~~~~~~~~l~l~l~~G~l~~~~~~~~~~-~~~--~~~~~s~~-~~~dg~wH~ 271 (348)
...+.|+|++|..+.+ -.|.-......=+.|+++++++..++...++. ..+ .+.+.... .+- ++||.
T Consensus 85 ~~nFSIsFWiRipk~~~~~~~~neytII~~~~nNsGWkIsl~~n~iiwtL~D~ngn~k~i~f~Y~~~~~isdyi-NkW~f 163 (444)
T 2vu9_A 85 YENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYI-NRWIF 163 (444)
T ss_dssp SCCEEEEEEEECCCCCSGGGTTCCEEEEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBSSSCSST-TSCEE
T ss_pred ccceEEEEEEecCCcccccccCcceEEEEeccCCCCcEEEEecCcEEEEEEeCCCCeeEEEEeeccccchhhhh-cceEE
Confidence 4568999999984321 23443223455678999999999998866553 333 22221111 233 89999
Q ss_pred EEEEEeC-CEEEEEEcCCCc
Q psy12396 272 IVAIKTK-NVISVAVDSMTT 290 (348)
Q Consensus 272 v~v~~~~-~~~~l~vD~~~~ 290 (348)
|++.-++ +...+.+||...
T Consensus 164 ITITndRL~n~~IyINg~Li 183 (444)
T 2vu9_A 164 VTITNNRLNNSKIYINGRLI 183 (444)
T ss_dssp EEEEECTTSEEEEEETTEEE
T ss_pred EEEEcccccceeEEECCEEe
Confidence 9999886 566899999873
No 83
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis}
Probab=58.98 E-value=14 Score=31.03 Aligned_cols=84 Identities=19% Similarity=0.265 Sum_probs=49.0
Q ss_pred ceEEEEEEEEeC--CCCeEEEEEcCCCCe-------EEEEEECCEEEE---------EE-ECCCcc-eEEEEcCCCCeee
Q psy12396 205 REMELKMDVKPR--NISGLLLSVHSKKDY-------FILQMIDGSVKA---------TV-DNGKGP-ISAIYTPSDPYFF 264 (348)
Q Consensus 205 ~~~~i~~~frT~--~~~Glll~~~~~~~~-------l~l~l~~G~l~~---------~~-~~~~~~-~~~~~~~~s~~~~ 264 (348)
.++.++|+||.. ..+|+.|+......+ ..+.|.|+.-.- .. +...|. +.. .........
T Consensus 79 ~dF~L~lE~k~~~~~NSGI~~~~~~~~~~~~~~~~G~EvQIlD~~~~~~~~~~~~~~~~~~~~~GslY~~-~~p~~~~~~ 157 (236)
T 3u1x_A 79 HNFQIKWDWKIGAQGNSGFLYHVQEGPKYKAPFETGPEYQLIDDDNYPWVSETGKEGLEDWQKTGCNYAM-YVPETKQVN 157 (236)
T ss_dssp SSEEEEEEEEECTTCEEEEEEEECCSTTCSCGGGTSCEEEEECTTCCCCBCTTSCBSCCGGGSTTCBTTT-BCCSSCCCC
T ss_pred ccEEEEEEEEeCCCCCcEEEEEecCCccccccccceEEEEEecCCCCCccccccccccCccccccccccc-cCCccccCC
Confidence 357788888875 467888876532222 456665432100 00 000111 111 011122345
Q ss_pred cCCcEEEEEEEEeCCEEEEEEcCCC
Q psy12396 265 CDGQWHTIVAIKTKNVISVAVDSMT 289 (348)
Q Consensus 265 ~dg~wH~v~v~~~~~~~~l~vD~~~ 289 (348)
-.|+|.+.+|...++++++.++|..
T Consensus 158 p~geWN~~~I~~~g~~i~v~lNG~~ 182 (236)
T 3u1x_A 158 PPGEWNSSMVLYKDGYVEHWLNGEK 182 (236)
T ss_dssp CTTSCEEEEEEEETTEEEEEETTEE
T ss_pred CCCceEEEEEEEECCEEEEEECCEE
Confidence 6899999999999999999999987
No 84
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=49.98 E-value=30 Score=33.66 Aligned_cols=76 Identities=16% Similarity=0.065 Sum_probs=45.9
Q ss_pred eeecCCcEEEEEEEEeCCEEEEEEcCCCcc-cccCCCCCCcccCCCCceEEcccCCCCCCCCCCCCccccceeeeeecCc
Q psy12396 262 YFFCDGQWHTIVAIKTKNVISVAVDSMTTD-KPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANC 340 (348)
Q Consensus 262 ~~~~dg~wH~v~v~~~~~~~~l~vD~~~~~-~~~~~~~~~~~~~~~~~l~iGG~~~~~~~~~~~~~~~~~~F~GCi~~~~ 340 (348)
....-++-|+|.+...+++..++||++. . ..............-.++||||--... . ..+-.=-++++-
T Consensus 551 ~~we~~~~~qv~l~l~~~~~s~yvdg~~-~~~~~~~~~~~~~~~~ishfy~g~~~~~~---~------~~~~~vtv~nv~ 620 (648)
T 1ms9_A 551 GSWEMGKRYHVVLTMANKIGSVYIDGEP-LEGSGQTVVPDERTPDISHFYVGGYKRSG---M------PTDSRVTVNNVL 620 (648)
T ss_dssp SCCCTTCEEEEEEEEETTEEEEEETTEE-CTTCCEECSCSSCCCCCCEEEESSCSCTT---S------CCCCCEEEEEEE
T ss_pred ccccCCcceEEEEEEeCCcEEEEECCEE-ecCCcccccccCCCcccceEEEcCCCCCC---c------ccCCCEEEEEee
Confidence 3566789999999999889999999987 3 111101122223344689999865432 0 111222355666
Q ss_pred eeeccCC
Q psy12396 341 KAVHPLT 347 (348)
Q Consensus 341 ~~~~~~~ 347 (348)
-|=+||.
T Consensus 621 lynr~l~ 627 (648)
T 1ms9_A 621 LYNRQLN 627 (648)
T ss_dssp EESSCCC
T ss_pred EecCCCC
Confidence 6666664
No 85
>3pme_A Type C neurotoxin; structural genomics, seattle structural genomics center for infectious disease, ssgcid, botulinum neurotoxin; 1.56A {Clostridium botulinum} PDB: 4f83_A* 3ogg_A 3n7j_A 3obr_A 3obt_A* 3rmx_A 3rmy_A
Probab=49.51 E-value=1.4e+02 Score=26.54 Aligned_cols=87 Identities=8% Similarity=0.121 Sum_probs=56.7
Q ss_pred cceEEEEEEEEeCCC-----C-eEEEEEcCCCCeEEEEEECCEEEEEEECCCcc-eEEEEcCCCCeeecC--CcEEEEEE
Q psy12396 204 GREMELKMDVKPRNI-----S-GLLLSVHSKKDYFILQMIDGSVKATVDNGKGP-ISAIYTPSDPYFFCD--GQWHTIVA 274 (348)
Q Consensus 204 ~~~~~i~~~frT~~~-----~-Glll~~~~~~~~l~l~l~~G~l~~~~~~~~~~-~~~~~~~~s~~~~~d--g~wH~v~v 274 (348)
...+.|+|++|..+. . -.|.-......=+.|+++++.+.+++...++. ..+.+.-.-....+| .+||.|++
T Consensus 66 y~nFSIsFWlRipk~~~n~~neytII~s~~nNsGWkIsl~~n~iIwtL~D~ngn~k~I~fsY~~~~~isdyiNkW~fITI 145 (420)
T 3pme_A 66 YENSSVSFWIKISKDLTNSHNEYTIINSIKQNSGWKLCIRNGNIEWILQDINRKYKSLIFDYSESLSHTGYTNKWFFVTI 145 (420)
T ss_dssp GTEEEEEEEEEECHHHHTCCSEEEEEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEEECSTTTCTTSCTTSCEEEEE
T ss_pred ccceEEEEEEEcccccccCCcceEEEEEecCCCceEEEEecCcEEEEEEeCCCCeeEEEEeehhccchhhhccceEEEEE
Confidence 456899999998432 1 23443333456688999999999998876553 333222111222222 89999999
Q ss_pred EEeC-CEEEEEEcCCCc
Q psy12396 275 IKTK-NVISVAVDSMTT 290 (348)
Q Consensus 275 ~~~~-~~~~l~vD~~~~ 290 (348)
.-++ +...|.++|...
T Consensus 146 TnnRL~n~~IyINg~Li 162 (420)
T 3pme_A 146 TNNIMGYMKLYINGELK 162 (420)
T ss_dssp EEETTSEEEEEETTEEE
T ss_pred EccccccceEEECCEEe
Confidence 8886 456899999773
No 86
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=48.26 E-value=1.1e+02 Score=24.84 Aligned_cols=87 Identities=7% Similarity=0.063 Sum_probs=48.3
Q ss_pred ceEEEEEEEEcCCC-C--CeEEEEEecC-CCCcEEEEEEeCcEEEEEEEcCCCC-----ceeecCceeecCCCcEEEEEE
Q psy12396 26 NKFDFSIDIKTTSE-Q--DGIIFYVADV-KHIDYVALYVKDGQIHYSFNCGSGP-----MALSSGDKLILDGEWHTVEFS 96 (348)
Q Consensus 26 ~~~~i~~~FrT~~~-~--~GlLl~~~~~-~~~~~l~l~L~~G~l~~~~~~g~~~-----~~~~~~~~~~~dg~Wh~v~v~ 96 (348)
....+++.+|.... + ...|+-.... ....-+.+.-..+.+.......... .........+..|+||.|++.
T Consensus 65 ~~~y~r~~v~~~~~~~~~~~t~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~l~~g~W~cvE~~ 144 (218)
T 3zyp_A 65 GDVYVRAWIRLQTALGSNHVTFIIMPDTAQGGKHLRIGGQSQVLDYNRESDDATLPDLSPNGIASTVTLPTGAFQCFEYH 144 (218)
T ss_dssp SSEEEEEEEEESSCCCSSCEEEEEEEBGGGTTCEEEEEEETTEEEEEETTTCCEESCSSHHHHHHSCCCCCSSCEEEEEE
T ss_pred ceEEEEEEEEecccCCCCcEEEEEeecCCCCCceEEeecccceeeEEEcCCccccCcccccccccceeecCCcEEEEEEE
Confidence 45567777776541 1 2333333322 2234455555666665544222110 001122336889999999986
Q ss_pred EeC-cEEEEEECCeeee
Q psy12396 97 RQQ-LSGKLKIDGQVVA 112 (348)
Q Consensus 97 ~~~-~~~~l~vd~~~~~ 112 (348)
... +.+.+.+|+....
T Consensus 145 ~~~~G~~~~W~DG~~v~ 161 (218)
T 3zyp_A 145 LGTDGTIETWLNGSLIP 161 (218)
T ss_dssp ECSSSCEEEEETTEECG
T ss_pred ECCCCeEEEEECCEEee
Confidence 654 7899999998853
No 87
>1oq1_A Protein YESU; structural genomics, singleton, PSI, protein structure initi midwest center for structural genomics, MCSG, unknown funct; 1.70A {Bacillus subtilis} SCOP: b.29.1.17
Probab=44.03 E-value=1.3e+02 Score=24.64 Aligned_cols=34 Identities=9% Similarity=-0.060 Sum_probs=28.4
Q ss_pred eecCCCcEEEEEEEeCcEEEEEECCeeeeeeeec
Q psy12396 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESK 117 (348)
Q Consensus 84 ~~~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~~~ 117 (348)
..+.++|++|+|...+..++..||+........+
T Consensus 154 ~~dan~~Y~i~i~kd~~~v~f~vNg~~lF~~~D~ 187 (223)
T 1oq1_A 154 PDDADSPYRMKLIKDKGYVHFSINGLPILEWMDD 187 (223)
T ss_dssp GGGCCSCEEEEEEEETTEEEEEETTEEEEEEECC
T ss_pred ccCCCCcEEEEEEEeCCEEEEEECCEEEEEeeCC
Confidence 3566899999999999999999999886655443
No 88
>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum}
Probab=42.68 E-value=3e+02 Score=28.38 Aligned_cols=86 Identities=15% Similarity=0.240 Sum_probs=59.7
Q ss_pred ccceEEEEEEEEcCCCCC---------eEEE-EEecCCCCcEEEEEEeCcEEEEEEEcCCCCceee--c--Cce---eec
Q psy12396 24 FKNKFDFSIDIKTTSEQD---------GIIF-YVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS--S--GDK---LIL 86 (348)
Q Consensus 24 ~~~~~~i~~~FrT~~~~~---------GlLl-~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~--~--~~~---~~~ 86 (348)
....++|+|+.|... -+ -.|. ..+. ...-..+.|+++.|.+.+....|....+ . ... .+.
T Consensus 911 l~~nFSIsFWiRipk-~~~~~in~~nEytII~~~~~--nNsGWkI~l~~n~iiwtl~D~ngn~k~i~f~y~~~~~isdyi 987 (1252)
T 3ffz_A 911 KYKNFSISFWVRIPN-YDNKIVNVNNEYTIINCMRD--NNSGWKVSLNHNEIIWTLQDNAGINQKLAFNYGNANGISDYI 987 (1252)
T ss_dssp SCCCCEEEEEEECCC-CCSTTTCCCCCEEEEEEEET--TTEEEEEEEETTEEEEEEECSSSCEEEEEEECCCCSBCCSST
T ss_pred cccceeEEEEEEcCC-cCccccccCCceeEEeeccC--CCCCcEEEEecCeEEEEEEeCCCCeeeEEEecccccchhhhh
Confidence 467899999999966 43 2444 3322 3567889999999999888755533232 1 111 233
Q ss_pred CCCcEEEEEEEeC-cEEEEEECCeeeee
Q psy12396 87 DGEWHTVEFSRQQ-LSGKLKIDGQVVAE 113 (348)
Q Consensus 87 dg~Wh~v~v~~~~-~~~~l~vd~~~~~~ 113 (348)
++||-|.++.+. +...+.+|+.....
T Consensus 988 -NkW~fITITnnRL~~~~IyINg~Li~~ 1014 (1252)
T 3ffz_A 988 -NKWIFVTITNDRLGDSKLYINGNLIDQ 1014 (1252)
T ss_dssp -TSCEEEEEEECTTSEEEEEETTEEEEE
T ss_pred -cceEEEEEEeccCccceEEECCEEeec
Confidence 899999999885 66799999987543
No 89
>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei}
Probab=42.25 E-value=1.5e+02 Score=24.69 Aligned_cols=60 Identities=20% Similarity=0.294 Sum_probs=40.4
Q ss_pred EEEEEEeCcEEEEEEEcCCC--C---c--eeecCceeecCCCcEEEEEEEe-----CcEEEEEECCeeeeee
Q psy12396 55 YVALYVKDGQIHYSFNCGSG--P---M--ALSSGDKLILDGEWHTVEFSRQ-----QLSGKLKIDGQVVAEG 114 (348)
Q Consensus 55 ~l~l~L~~G~l~~~~~~g~~--~---~--~~~~~~~~~~dg~Wh~v~v~~~-----~~~~~l~vd~~~~~~~ 114 (348)
.+.+.+.+.+|..+...+.- + . .....-.++.-|+||.|.+... .+.+.|.+|+......
T Consensus 109 ~~~~~v~G~~l~~r~~sgt~~~p~~~~~~~~~~~l~~v~~G~Wh~iVihvkWs~d~~Gf~~vW~dG~~v~~~ 180 (238)
T 2zzj_A 109 STMIWIQNNQLYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGAKVHEE 180 (238)
T ss_dssp EEEEEEETTEEEEEEEEECCBTTBCCEEEEEEEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTEEEEEE
T ss_pred ceeEEEeCCEEEEEeecccccccCcCccceeccccccccCCceEEEEEEEEEeCCCCcEEEEEECCEEEEee
Confidence 57788888888877654431 0 1 1122344788999999987655 3578899999875543
No 90
>3gne_A Val-1; alginate lyase, polysaccharide lyase family 14, chlorella VI lyase; HET: FLC; 1.20A {Chlorella virus} PDB: 3a0n_A* 3im0_A*
Probab=38.70 E-value=24 Score=29.77 Aligned_cols=73 Identities=14% Similarity=-0.004 Sum_probs=42.0
Q ss_pred eecCCcEEEEEEEEeCCE-----------EEEEEcCCCcccc-cCCCCCCccc---CCCCceEEcccCCCCCCCCCCCCc
Q psy12396 263 FFCDGQWHTIVAIKTKNV-----------ISVAVDSMTTDKP-GLGPPGSSET---DTNNAVFIGGHPFLSLSSKKSGPR 327 (348)
Q Consensus 263 ~~~dg~wH~v~v~~~~~~-----------~~l~vD~~~~~~~-~~~~~~~~~~---~~~~~l~iGG~~~~~~~~~~~~~~ 327 (348)
.+..|+|++|+...+-|. +++.||++. +.. .+.-.....+ ...-..|+||..+. ......
T Consensus 159 ~f~~G~W~~V~q~VkLNT~~~G~g~aDG~v~v~VNG~~-v~~~~i~~r~~~~~~I~gi~fsTFFGGs~as----p~Dq~~ 233 (252)
T 3gne_A 159 ALKYDVWNRIEIGTKMNTFKNGIPQLDGESYVIVNGKK-EVLKRINWSRSPDLLISRFDWNTFFGGPLPS----PKNQVA 233 (252)
T ss_dssp CSCBTSCEEEEEEEECCCEETTEECSCEEEEEEETTEE-EEEEEECCCSSTTCCEEEEEEEEEECSSCCC----SSCEEE
T ss_pred eEcCCceEEEEEEEEcCCCCCCCccCCceEEEEECCEE-EEECCEEEEecCCccEeEEEEEEEcCCCCCC----CCceeE
Confidence 688899999998766443 589999988 421 1100011111 11235788998733 344445
Q ss_pred cccceeeeeecCc
Q psy12396 328 TKRRSVFLINANC 340 (348)
Q Consensus 328 ~~~~F~GCi~~~~ 340 (348)
..++|+-+.-+++
T Consensus 234 yf~df~v~~~~~~ 246 (252)
T 3gne_A 234 YFTNFQMKKYELE 246 (252)
T ss_dssp EEEEEEEECCC--
T ss_pred EecceEEEEEEee
Confidence 5666776666554
No 91
>3pme_A Type C neurotoxin; structural genomics, seattle structural genomics center for infectious disease, ssgcid, botulinum neurotoxin; 1.56A {Clostridium botulinum} PDB: 4f83_A* 3ogg_A 3n7j_A 3obr_A 3obt_A* 3rmx_A 3rmy_A
Probab=37.78 E-value=2.2e+02 Score=25.36 Aligned_cols=86 Identities=15% Similarity=0.135 Sum_probs=58.1
Q ss_pred ccceEEEEEEEEcCCC----CC-eEEE-EEecCCCCcEEEEEEeCcEEEEEEEcCCCCceeecC----c---eeecCCCc
Q psy12396 24 FKNKFDFSIDIKTTSE----QD-GIIF-YVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG----D---KLILDGEW 90 (348)
Q Consensus 24 ~~~~~~i~~~FrT~~~----~~-GlLl-~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~----~---~~~~dg~W 90 (348)
-...++|+|+.|...- ++ -.|. ... ...-..+.|+++.|.+.+....+....+.- . ..+. ++|
T Consensus 65 my~nFSIsFWlRipk~~~n~~neytII~s~~---nNsGWkIsl~~n~iIwtL~D~ngn~k~I~fsY~~~~~isdyi-NkW 140 (420)
T 3pme_A 65 IYENSSVSFWIKISKDLTNSHNEYTIINSIK---QNSGWKLCIRNGNIEWILQDINRKYKSLIFDYSESLSHTGYT-NKW 140 (420)
T ss_dssp GGTEEEEEEEEEECHHHHTCCSEEEEEEEEE---TTEEEEEEEETTEEEEEEECTTSCEEEEEEECSTTTCTTSCT-TSC
T ss_pred cccceEEEEEEEcccccccCCcceEEEEEec---CCCceEEEEecCcEEEEEEeCCCCeeEEEEeehhccchhhhc-cce
Confidence 4678999999999440 22 2222 222 356789999999999998876553333321 1 1233 899
Q ss_pred EEEEEEEeC-cEEEEEECCeeeee
Q psy12396 91 HTVEFSRQQ-LSGKLKIDGQVVAE 113 (348)
Q Consensus 91 h~v~v~~~~-~~~~l~vd~~~~~~ 113 (348)
|-|.++.+. +...+.|++.....
T Consensus 141 ~fITITnnRL~n~~IyINg~Li~~ 164 (420)
T 3pme_A 141 FFVTITNNIMGYMKLYINGELKQS 164 (420)
T ss_dssp EEEEEEEETTSEEEEEETTEEEEE
T ss_pred EEEEEEccccccceEEECCEEecc
Confidence 999999884 66699999987543
No 92
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=34.59 E-value=1.3e+02 Score=22.14 Aligned_cols=45 Identities=13% Similarity=0.098 Sum_probs=29.6
Q ss_pred CCeEEEEEECCEEEEEEECCCcc----eEEEEcCCCCeeecCCcEEEEE
Q psy12396 229 KDYFILQMIDGSVKATVDNGKGP----ISAIYTPSDPYFFCDGQWHTIV 273 (348)
Q Consensus 229 ~~~l~l~l~~G~l~~~~~~~~~~----~~~~~~~~s~~~~~dg~wH~v~ 273 (348)
+.+-.|.+..|.|++..-...+. ..+...-....-+.-..||+|.
T Consensus 37 GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe 85 (119)
T 3dl3_A 37 DVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIE 85 (119)
T ss_dssp TEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEE
T ss_pred cEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEE
Confidence 56778999999999986543221 2222222234456789999999
No 93
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=33.07 E-value=73 Score=31.77 Aligned_cols=78 Identities=8% Similarity=0.081 Sum_probs=49.2
Q ss_pred EEEEEEEEeCCCCeEE-EEEcCCCCeEEE-EEEC-CEEEEEEECCCcceEEEEcCCCCeeecCCcEEEEEEEEeC---CE
Q psy12396 207 MELKMDVKPRNISGLL-LSVHSKKDYFIL-QMID-GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTK---NV 280 (348)
Q Consensus 207 ~~i~~~frT~~~~Gll-l~~~~~~~~l~l-~l~~-G~l~~~~~~~~~~~~~~~~~~s~~~~~dg~wH~v~v~~~~---~~ 280 (348)
.+++-..|-..-.-+. +|..+...|+.+ ++.+ |.+.+.+.-.++...+ .+.. +|+.||.+.+..+. ..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~~~~~~g~~~~----~~g~--~~~~~h~~~~~~~~~~~~~ 167 (781)
T 1w0p_A 94 WRMTTEMKVLSGGMITNYYANGTQRVLPIISLDSSGNLVVEFEGQTGRTVL----ATGT--AATEYHKFELVFLPGSNPS 167 (781)
T ss_dssp EEEEEEEEEEEESCBCCEEECSSEEECEEEEECTTSCEEEEETTCCSCEEE----ECGG--GGGSCEEEEEEEECSSSCE
T ss_pred ceEEEEEEEecCCceeeeecCCCceEEEEEEEcCCCcEEEEEEccCCCeee----ccCC--CCCceeEEEEEeecCCCce
Confidence 5566666654322232 555555677765 5553 8877777434455433 2233 89999999998554 48
Q ss_pred EEEEEcCCCc
Q psy12396 281 ISVAVDSMTT 290 (348)
Q Consensus 281 ~~l~vD~~~~ 290 (348)
+.+.+||...
T Consensus 168 ~~f~~dG~l~ 177 (781)
T 1w0p_A 168 ASFYFDGKLI 177 (781)
T ss_dssp EEEEETTEEE
T ss_pred eEEecCCcEE
Confidence 9999999873
No 94
>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei}
Probab=30.34 E-value=1.1e+02 Score=25.46 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=36.0
Q ss_pred eEEEEEECCEEEEEEECCCc------ceEEEEcCCCCeeecCCcEEEEEEEEe-----CCEEEEEEcCCC
Q psy12396 231 YFILQMIDGSVKATVDNGKG------PISAIYTPSDPYFFCDGQWHTIVAIKT-----KNVISVAVDSMT 289 (348)
Q Consensus 231 ~l~l~l~~G~l~~~~~~~~~------~~~~~~~~~s~~~~~dg~wH~v~v~~~-----~~~~~l~vD~~~ 289 (348)
.+.+.+.+..|..++..+.- ..... .....+|.-|+||.|.|..+ .+.++|-+||+.
T Consensus 109 ~~~~~v~G~~l~~r~~sgt~~~p~~~~~~~~--~~~l~~v~~G~Wh~iVihvkWs~d~~Gf~~vW~dG~~ 176 (238)
T 2zzj_A 109 STMIWIQNNQLYSRYVNGHYRQPNCGRNIVT--RPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGAK 176 (238)
T ss_dssp EEEEEEETTEEEEEEEEECCBTTBCCEEEEE--EEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTEE
T ss_pred ceeEEEeCCEEEEEeecccccccCcCcccee--ccccccccCCceEEEEEEEEEeCCCCcEEEEEECCEE
Confidence 34566777777766654421 11111 11245788999999998654 347889999987
No 95
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1
Probab=28.99 E-value=2.5e+02 Score=23.28 Aligned_cols=80 Identities=15% Similarity=0.176 Sum_probs=48.9
Q ss_pred eEEEEEEEEcCC-----CCCeEEEEEecCCC--------------------CcEEEEEEe--CcEEEEEEEcCCCCceee
Q psy12396 27 KFDFSIDIKTTS-----EQDGIIFYVADVKH--------------------IDYVALYVK--DGQIHYSFNCGSGPMALS 79 (348)
Q Consensus 27 ~~~i~~~FrT~~-----~~~GlLl~~~~~~~--------------------~~~l~l~L~--~G~l~~~~~~g~~~~~~~ 79 (348)
.++.+|.|+-.. ..||+-|+..+... ...+++|+. +.++-+..+--.. ....
T Consensus 66 SFsT~F~F~I~~~~~~~~gdGlAF~l~p~~~~p~~~g~~LGL~n~~~~~~~~~~vAVEFDT~~nHVGIdvNs~~S-~~t~ 144 (240)
T 1ioa_A 66 SFNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQKKQEFLGIFNTNNPEPNARTVAVVFNTFKNRIDFDKNFIKP-YVNE 144 (240)
T ss_dssp EEEEEEEEECCBSCTTSCCEEEEEEEEETTCCCCCCGGGTTTCCCSSCCGGGCCEEEEEETTTTEEEEEESSSSC-SEEE
T ss_pred cEEEEEEEEEeCCCCCCCCCcEEEEEecCCCCCCCCCCcccccccCCCCCcCcEEEEEecCcCCceeeeeCCccc-cccc
Confidence 466666675432 15899998765311 247888888 5666665542111 1222
Q ss_pred cCceeecCCCcEEEEEEEeCc--EEEEEEC
Q psy12396 80 SGDKLILDGEWHTVEFSRQQL--SGKLKID 107 (348)
Q Consensus 80 ~~~~~~~dg~Wh~v~v~~~~~--~~~l~vd 107 (348)
..+..+.+|+++++.|..... .+.+.++
T Consensus 145 ~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~ 174 (240)
T 1ioa_A 145 NCDFHKYNGEKTDVQITYDSSNNDLRVFLH 174 (240)
T ss_dssp ECCHHHHCSSCEEEEEEEETTTTEEEEEEE
T ss_pred cCCccccCCCEEEEEEEEeCCCcEEEEEEe
Confidence 233455589999999999974 6666663
No 96
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*
Probab=25.14 E-value=2.8e+02 Score=22.65 Aligned_cols=79 Identities=16% Similarity=0.181 Sum_probs=47.0
Q ss_pred eEEEEEEEEcCC-----CCCeEEEEEecCC---CCcEEEEEEe--CcEEEEEEEcCCCCceeecCceeecCCCcEEEEEE
Q psy12396 27 KFDFSIDIKTTS-----EQDGIIFYVADVK---HIDYVALYVK--DGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFS 96 (348)
Q Consensus 27 ~~~i~~~FrT~~-----~~~GlLl~~~~~~---~~~~l~l~L~--~G~l~~~~~~g~~~~~~~~~~~~~~dg~Wh~v~v~ 96 (348)
.++.+|.|+-.. ..||+-|+..+.. ....+++|+. +.++-+..+ +-.......+..+.+|+-+++.|.
T Consensus 61 SFsT~F~F~I~~~~~~~~gdGlAF~l~p~~~~p~~~~vAVEFDT~~nHVGIdvN--siS~~~~~~~~~l~~g~~~~v~I~ 138 (223)
T 1dhk_B 61 SFDTNFTMNIRTHRQANSAVGLDFVLVPVQPESKGDTVTVEFDTFLSRISIDVN--NNDIKSVPWDVHDYDGQNAEVRIT 138 (223)
T ss_dssp EEEEEEEEEEECCC---CCSEEEEEEEEC------CCEEEEEETTTTEEEEEET--TEEEEEEECCGGGTTTSCEEEEEE
T ss_pred ceEEEEEEEEeCCCCCCCCCceEEEEecCCCCCCccEEEEEecCCCCcccccCC--ccccccccCCccccCCCEEEEEEE
Confidence 455555554422 0589999887642 2358888888 456655543 211111222345558999999999
Q ss_pred EeCc--EEEEEEC
Q psy12396 97 RQQL--SGKLKID 107 (348)
Q Consensus 97 ~~~~--~~~l~vd 107 (348)
.... .+.+.++
T Consensus 139 Yd~~~~~L~V~l~ 151 (223)
T 1dhk_B 139 YNSSTKVFSVSLS 151 (223)
T ss_dssp EETTTTEEEEEEE
T ss_pred EeCCCCEEEEEEe
Confidence 9974 6666664
No 97
>2jtd_A Myomesin-1, skelemin; immunoglobulin domain, muscle protein, thick filament, immune system, cell adhesion; NMR {Mus musculus}
Probab=23.92 E-value=1.8e+02 Score=21.69 Aligned_cols=59 Identities=10% Similarity=0.190 Sum_probs=42.3
Q ss_pred CeEEEEEE-CCEEEEEEECCC--cceEEEEcCCCCeeecCCcEEEEEEEEeCCEEEEEEcCCC
Q psy12396 230 DYFILQMI-DGSVKATVDNGK--GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMT 289 (348)
Q Consensus 230 ~~l~l~l~-~G~l~~~~~~~~--~~~~~~~~~~s~~~~~dg~wH~v~v~~~~~~~~l~vD~~~ 289 (348)
.-+++++. .|+|++=+.... ....+.+-+ ....+.+|.-|.+.+.++.+-++|.+|.-.
T Consensus 43 sel~vEiLEkG~VRfWlQaeklS~~a~~~~if-Ndkei~~~~~~ki~fD~~tGiIEmime~~~ 104 (142)
T 2jtd_A 43 SELAVEILEKGQVRFWMQAEKLSSNAKVSYIF-NEKEIFEGPKYKMHIDRNTGIIEMFMEKLQ 104 (142)
T ss_dssp CEEEEEEETTTEEEEEEECSCCTTCCEEEEEE-TTEECCSSSSCCEEECSSSCCEEEEECCCC
T ss_pred hhhhHHHHhcCcEEEEEEhhhcCCCceEEEEe-ccceeccCCCeeEeecccCChhhhhHhhcc
Confidence 34677665 699988665442 222232222 477899999999999999999999998765
No 98
>3osd_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.80A {Bacteroides thetaiotaomicron} PDB: 3nmb_A 4hxc_A*
Probab=23.38 E-value=1.3e+02 Score=25.49 Aligned_cols=30 Identities=17% Similarity=0.100 Sum_probs=25.9
Q ss_pred cCCCcEEEEEEEeCcEEEEEECCeeeeeee
Q psy12396 86 LDGEWHTVEFSRQQLSGKLKIDGQVVAEGE 115 (348)
Q Consensus 86 ~dg~Wh~v~v~~~~~~~~l~vd~~~~~~~~ 115 (348)
..|+|.+.+|+..+..+++.||+..+....
T Consensus 177 p~GeWNt~~I~v~g~~v~v~lNG~~V~d~~ 206 (265)
T 3osd_A 177 PFGEWNKAKIMVYKGTVVHGQNDENVLEYH 206 (265)
T ss_dssp CTTSCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred CCCceEEEEEEEECCEEEEEECCEEEEEee
Confidence 369999999999999999999998865543
No 99
>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} PDB: 3azw_A 3azv_A 3n7m_A 4fvv_A* 3n7k_A 3r4s_A* 3r4u_A
Probab=22.22 E-value=4.2e+02 Score=23.63 Aligned_cols=85 Identities=12% Similarity=0.127 Sum_probs=58.4
Q ss_pred ccceEEEEEEEEcCCCCCe-----EEEEEecCCCCcEEEEEEeCcEEEEEEEcCCCCceee--c-----CceeecCCCcE
Q psy12396 24 FKNKFDFSIDIKTTSEQDG-----IIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS--S-----GDKLILDGEWH 91 (348)
Q Consensus 24 ~~~~~~i~~~FrT~~~~~G-----lLl~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~--~-----~~~~~~dg~Wh 91 (348)
-...++|+|+.|... -+. .|.=.- ....-..+.++++.|++.+....+....+ . .-..+ ++||
T Consensus 69 my~nFSIsFWiRi~k-~~~n~~nytII~~~--~nNsGWkI~~~~n~iiwtL~D~ngn~k~i~fsY~~~~~isdy--NkW~ 143 (424)
T 3n7l_A 69 MYESFSISFWIRINK-WVSNLPGYTIIDSV--KNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGY--NKWF 143 (424)
T ss_dssp TTTEEEEEEEEEEET-CCTTCCCEEEEEEE--SSSCEEEEEEETTEEEEEEEEETTEEEEEEEECCGGGCTTCC--CSCE
T ss_pred cccceEEEEEEEccc-cccCCCccEEEeee--cCCCceEEEEecCcEEEEEEeCCCCeEEEEEecccccccccc--ccEE
Confidence 357899999999877 333 222222 24567899999999999887755522222 1 11234 8999
Q ss_pred EEEEEEeC-cEEEEEECCeeeee
Q psy12396 92 TVEFSRQQ-LSGKLKIDGQVVAE 113 (348)
Q Consensus 92 ~v~v~~~~-~~~~l~vd~~~~~~ 113 (348)
-|.++.+. +...+.|++.....
T Consensus 144 fITITnnrl~n~~IyINg~Li~~ 166 (424)
T 3n7l_A 144 FVTITTNMMGNMMIYINGKLIDT 166 (424)
T ss_dssp EEEEEEETTSEEEEEETTEEEEE
T ss_pred EEEEEccccccceEEECCEEecc
Confidence 99999884 66799999987543
No 100
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=21.69 E-value=2.2e+02 Score=28.40 Aligned_cols=84 Identities=17% Similarity=0.250 Sum_probs=52.0
Q ss_pred ccceEEEEEEEEcCCCCCeEEEEEecCCCCcEE-EEEEeC-cEEEEEEEcCCCCceeecCceeecCCCcEEEEEEEe---
Q psy12396 24 FKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYV-ALYVKD-GQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQ--- 98 (348)
Q Consensus 24 ~~~~~~i~~~FrT~~~~~GlLl~~~~~~~~~~l-~l~L~~-G~l~~~~~~g~~~~~~~~~~~~~~dg~Wh~v~v~~~--- 98 (348)
.....+++-..|-.+ ..-+.=|-++. ...|+ .+++.+ |.+.+.+.-..+ ...+..+. +|+.||.+.+...
T Consensus 90 ~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~r~~~~~~~~~~g~~~~~~~~~~g-~~~~~~g~--~~~~~h~~~~~~~~~~ 164 (781)
T 1w0p_A 90 SSFGWRMTTEMKVLS-GGMITNYYANG-TQRVLPIISLDSSGNLVVEFEGQTG-RTVLATGT--AATEYHKFELVFLPGS 164 (781)
T ss_dssp HHHCEEEEEEEEEEE-ESCBCCEEECS-SEEECEEEEECTTSCEEEEETTCCS-CEEEECGG--GGGSCEEEEEEEECSS
T ss_pred hhcCceEEEEEEEec-CCceeeeecCC-CceEEEEEEEcCCCcEEEEEEccCC-CeeeccCC--CCCceeEEEEEeecCC
Confidence 345566777777766 44444444442 33454 445553 788877754445 33343333 8999999998844
Q ss_pred CcEEEEEECCeeee
Q psy12396 99 QLSGKLKIDGQVVA 112 (348)
Q Consensus 99 ~~~~~l~vd~~~~~ 112 (348)
...+.+.+|+....
T Consensus 165 ~~~~~f~~dG~l~~ 178 (781)
T 1w0p_A 165 NPSASFYFDGKLIR 178 (781)
T ss_dssp SCEEEEEETTEEEE
T ss_pred CceeEEecCCcEEE
Confidence 45888999997644
No 101
>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=21.47 E-value=85 Score=25.31 Aligned_cols=83 Identities=18% Similarity=0.262 Sum_probs=47.3
Q ss_pred ceEEEEEEEEeC--CCCeEEEEEcCCCC----eEEEEEECCEEE----EEEECCCcc-eEEEEcCC-CCeeec-CCcEEE
Q psy12396 205 REMELKMDVKPR--NISGLLLSVHSKKD----YFILQMIDGSVK----ATVDNGKGP-ISAIYTPS-DPYFFC-DGQWHT 271 (348)
Q Consensus 205 ~~~~i~~~frT~--~~~Glll~~~~~~~----~l~l~l~~G~l~----~~~~~~~~~-~~~~~~~~-s~~~~~-dg~wH~ 271 (348)
.++.++++||.. ..+|+.|......+ -..+.|.+..-. ..-....+. +.+ ..+ ....+. .|+|.+
T Consensus 47 ~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~G~EvQild~~~~~~~~~~~~~~~GslY~~--~~~~~~~~~kp~GeWN~ 124 (201)
T 3imm_A 47 ENFELDLDFKTDVGTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGKPYEKCGAIYGH--LGAVQDKVVKKPGEWNH 124 (201)
T ss_dssp CSEEEEEEEEECTTCEEEEEEEESCSSSCTTSSEEEEEECTTCCTTTTCCGGGSTTSBTTT--BCCSSSCCSCCTTSEEE
T ss_pred ccEEEEEEEEECCCCccEEEEEecCCCCCcCcEEEEEEEcCCCCccccCCCCCceEeeccc--cCccccccCCCCCeeEE
Confidence 457788888875 45688877653211 135555443210 000000111 111 011 122333 799999
Q ss_pred EEEEEeCCEEEEEEcCCC
Q psy12396 272 IVAIKTKNVISVAVDSMT 289 (348)
Q Consensus 272 v~v~~~~~~~~l~vD~~~ 289 (348)
.+|...++++++.++|..
T Consensus 125 ~~I~~~g~~i~v~lNG~~ 142 (201)
T 3imm_A 125 MRIKCAGQHIMVILNGKK 142 (201)
T ss_dssp EEEEEETTEEEEEETTEE
T ss_pred EEEEEECCEEEEEECCEE
Confidence 999999999999999987
Done!