Your job contains 1 sequence.
>psy12396
MSYYVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYV
KDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSS
KTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSD
KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGS
VKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGS
SETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINANCKAVHPLTS
The BLAST search returned 15 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12396
(348 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q16363 - symbol:LAMA4 "Laminin subunit alpha-4"... 463 2.3e-42 1
RGD|1560062 - symbol:Lama4 "laminin, alpha 4" species:101... 460 3.8e-42 1
UNIPROTKB|F1RZM4 - symbol:LAMA4 "Uncharacterized protein"... 459 4.3e-42 1
UNIPROTKB|F1P420 - symbol:LAMA2 "Uncharacterized protein"... 457 2.0e-41 1
UNIPROTKB|F1PR66 - symbol:LAMA4 "Uncharacterized protein"... 450 5.2e-41 1
MGI|MGI:109321 - symbol:Lama4 "laminin, alpha 4" species:... 448 9.0e-41 1
UNIPROTKB|F1NSZ5 - symbol:LAMA4 "Uncharacterized protein"... 446 1.4e-40 1
FB|FBgn0002526 - symbol:LanA "Laminin A" species:7227 "Dr... 447 2.9e-40 1
UNIPROTKB|F1MYX9 - symbol:LAMA4 "Uncharacterized protein"... 443 3.1e-40 1
ZFIN|ZDB-GENE-060119-1 - symbol:lama2 "laminin, alpha 2" ... 441 1.0e-39 1
WB|WBGene00001328 - symbol:epi-1 species:6239 "Caenorhabd... 432 1.1e-38 1
ZFIN|ZDB-GENE-040724-213 - symbol:lama4 "laminin, alpha 4... 425 2.6e-38 1
UNIPROTKB|F1LZ10 - symbol:Lama2 "Protein Lama2" species:1... 419 6.3e-38 1
UNIPROTKB|F1S2Z4 - symbol:LOC100525900 "Uncharacterized p... 412 1.8e-37 1
RGD|1308889 - symbol:Lama2 "laminin, alpha 2" species:101... 419 2.2e-37 1
UNIPROTKB|P24043 - symbol:LAMA2 "Laminin subunit alpha-2"... 413 9.7e-37 1
UNIPROTKB|F1MMT2 - symbol:LAMA2 "Uncharacterized protein"... 405 6.8e-36 1
UNIPROTKB|F1N8P9 - symbol:LAMA1 "Uncharacterized protein"... 397 4.8e-35 1
UNIPROTKB|F1NM47 - symbol:LAMA1 "Uncharacterized protein"... 397 4.8e-35 1
MGI|MGI:99912 - symbol:Lama2 "laminin, alpha 2" species:1... 393 1.3e-34 1
UNIPROTKB|E2RPP1 - symbol:LAMA3 "Uncharacterized protein"... 391 2.3e-34 1
UNIPROTKB|F1PEZ5 - symbol:LAMA2 "Uncharacterized protein"... 390 2.7e-34 1
UNIPROTKB|F1PVY5 - symbol:LAMA2 "Uncharacterized protein"... 390 2.7e-34 1
MGI|MGI:99892 - symbol:Lama1 "laminin, alpha 1" species:1... 386 7.1e-34 1
UNIPROTKB|P25391 - symbol:LAMA1 "Laminin subunit alpha-1"... 384 1.1e-33 1
UNIPROTKB|F1MEG3 - symbol:LAMA1 "Uncharacterized protein"... 383 1.4e-33 1
ZFIN|ZDB-GENE-030131-9823 - symbol:lama5 "laminin, alpha ... 377 7.8e-33 1
RGD|1307207 - symbol:Lama1 "laminin, alpha 1" species:101... 372 2.2e-32 1
UNIPROTKB|F1NZZ2 - symbol:LAMA5 "Uncharacterized protein"... 372 2.7e-32 1
UNIPROTKB|F1PJ02 - symbol:LAMA1 "Uncharacterized protein"... 365 1.2e-31 1
UNIPROTKB|F1MDD5 - symbol:Bt.12589 "Uncharacterized prote... 365 1.3e-31 1
UNIPROTKB|Q6VU69 - symbol:LAMA3 "Laminin subunit alpha-3"... 359 2.4e-31 1
UNIPROTKB|B0YJ33 - symbol:LAMA3 "Laminin subunit alpha-3"... 359 2.5e-31 1
UNIPROTKB|I3LV27 - symbol:LAMA3 "Uncharacterized protein"... 358 3.0e-31 1
UNIPROTKB|F1SBB3 - symbol:LAMA3 "Uncharacterized protein"... 358 3.2e-31 1
UNIPROTKB|Q16787 - symbol:LAMA3 "Laminin subunit alpha-3"... 359 5.7e-31 1
RGD|628776 - symbol:Lama3 "laminin, alpha 3" species:1011... 352 1.4e-30 1
UNIPROTKB|F1NQ51 - symbol:LAMA3 "Uncharacterized protein"... 355 1.5e-30 1
ZFIN|ZDB-GENE-060118-1 - symbol:lama1 "laminin, alpha 1" ... 344 2.0e-29 1
UNIPROTKB|E9PTR0 - symbol:E9PTR0 "Uncharacterized protein... 326 7.4e-28 1
MGI|MGI:99909 - symbol:Lama3 "laminin, alpha 3" species:1... 327 1.4e-27 1
UNIPROTKB|F1LU77 - symbol:F1LU77 "Uncharacterized protein... 326 1.7e-27 1
ZFIN|ZDB-GENE-050208-475 - symbol:lama3 "laminin, alpha 3... 274 2.7e-22 1
UNIPROTKB|E1BQW4 - symbol:EGFLAM "Uncharacterized protein... 212 1.5e-21 2
MGI|MGI:2146149 - symbol:Egflam "EGF-like, fibronectin ty... 209 6.4e-20 2
UNIPROTKB|A3KN33 - symbol:EGFLAM "Pikachurin" species:991... 199 9.8e-20 2
UNIPROTKB|F1N606 - symbol:EGFLAM "Pikachurin" species:991... 199 1.1e-19 2
RGD|1306592 - symbol:Egflam "EGF-like, fibronectin type I... 205 1.5e-19 2
UNIPROTKB|Q63HQ2 - symbol:EGFLAM "Pikachurin" species:960... 199 2.6e-19 2
UNIPROTKB|I3LEG7 - symbol:EGFLAM "Uncharacterized protein... 204 1.1e-18 2
UNIPROTKB|F1LQ53 - symbol:Agrn "Agrin" species:10116 "Rat... 207 5.0e-17 2
MGI|MGI:87961 - symbol:Agrn "agrin" species:10090 "Mus mu... 205 4.0e-16 2
ZFIN|ZDB-GENE-080807-4 - symbol:hspg2 "heparan sulfate pr... 189 4.4e-16 2
RGD|2067 - symbol:Agrn "agrin" species:10116 "Rattus norv... 207 4.7e-16 2
UNIPROTKB|O00468 - symbol:AGRN "Agrin" species:9606 "Homo... 193 2.3e-15 2
UNIPROTKB|F1MSI2 - symbol:AGRN "Uncharacterized protein" ... 196 3.3e-15 2
UNIPROTKB|O15230 - symbol:LAMA5 "Laminin subunit alpha-5"... 225 4.6e-15 1
UNIPROTKB|F1Q2Z6 - symbol:AGRN "Uncharacterized protein" ... 194 5.8e-15 2
UNIPROTKB|F1NAT6 - symbol:HSPG2 "Uncharacterized protein"... 183 6.0e-15 2
UNIPROTKB|F1LWS0 - symbol:Lama5 "Protein Lama5" species:1... 219 1.0e-14 1
FB|FBgn0261563 - symbol:wb "wing blister" species:7227 "D... 219 2.2e-14 1
UNIPROTKB|F1MAN8 - symbol:Lama5 "Protein Lama5" species:1... 219 2.4e-14 1
UNIPROTKB|F1MC13 - symbol:LAMA5 "Uncharacterized protein"... 218 3.1e-14 1
MGI|MGI:1341292 - symbol:Ush2a "Usher syndrome 2A (autoso... 219 3.4e-14 1
FB|FBgn0034070 - symbol:SP2353 "SP2353" species:7227 "Dro... 164 1.3e-13 2
UNIPROTKB|P31696 - symbol:AGRN "Agrin" species:9031 "Gall... 160 1.7e-12 2
UNIPROTKB|E1C8Q7 - symbol:E1C8Q7 "Uncharacterized protein... 164 4.7e-12 2
ZFIN|ZDB-GENE-070206-5 - symbol:nrxn2a "neurexin 2a" spec... 170 5.7e-12 2
MGI|MGI:96257 - symbol:Hspg2 "perlecan (heparan sulfate p... 197 6.9e-12 2
ZFIN|ZDB-GENE-030131-1033 - symbol:agrn "agrin" species:7... 167 9.4e-12 2
UNIPROTKB|F5GYC7 - symbol:NRXN1 "Neurexin-1-beta" species... 165 1.4e-11 2
ZFIN|ZDB-GENE-070206-7 - symbol:nrxn2b "neurexin 2b" spec... 143 1.5e-11 2
UNIPROTKB|F1NZ77 - symbol:USH2A "Uncharacterized protein"... 134 1.5e-11 2
WB|WBGene00007799 - symbol:nrx-1 species:6239 "Caenorhabd... 186 6.0e-11 1
UNIPROTKB|F1P3E3 - symbol:AGRN "Agrin" species:9031 "Gall... 170 6.8e-11 2
UNIPROTKB|E1BP10 - symbol:SLIT1 "Uncharacterized protein"... 184 7.9e-11 1
ZFIN|ZDB-GENE-070206-10 - symbol:nrxn3b "neurexin 3b" spe... 175 8.0e-11 2
UNIPROTKB|D6RJD2 - symbol:EGFLAM "Pikachurin" species:960... 156 8.9e-11 1
UNIPROTKB|F1LS74 - symbol:Slit1 "Slit homolog 1 protein" ... 183 1.0e-10 1
UNIPROTKB|F1NR94 - symbol:SLIT2 "Uncharacterized protein"... 179 1.1e-10 1
UNIPROTKB|Q5T0V0 - symbol:SLIT1 "Slit homolog 1 protein" ... 183 1.1e-10 1
MGI|MGI:1315203 - symbol:Slit1 "slit homolog 1 (Drosophil... 183 1.1e-10 1
RGD|69307 - symbol:Slit1 "slit homolog 1 (Drosophila)" sp... 183 1.1e-10 1
UNIPROTKB|O88279 - symbol:Slit1 "Slit homolog 1 protein" ... 183 1.1e-10 1
UNIPROTKB|O75093 - symbol:SLIT1 "Slit homolog 1 protein" ... 183 1.1e-10 1
UNIPROTKB|F1NR89 - symbol:SLIT2 "Uncharacterized protein"... 180 1.2e-10 1
UNIPROTKB|O75445 - symbol:USH2A "Usherin" species:9606 "H... 188 1.2e-10 1
ZFIN|ZDB-GENE-030722-4 - symbol:slit1b "slit homolog 1b (... 181 1.9e-10 1
UNIPROTKB|F1MER7 - symbol:HSPG2 "Uncharacterized protein"... 185 2.2e-10 1
UNIPROTKB|F1S8Z0 - symbol:SLIT1 "Uncharacterized protein"... 180 2.2e-10 1
UNIPROTKB|F1NR92 - symbol:SLIT2 "Uncharacterized protein"... 180 2.3e-10 1
UNIPROTKB|P98160 - symbol:HSPG2 "Basement membrane-specif... 177 2.4e-10 2
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 180 2.5e-10 1
UNIPROTKB|F1PSS7 - symbol:SLIT1 "Uncharacterized protein"... 180 2.5e-10 1
UNIPROTKB|E1BP05 - symbol:USH2A "Uncharacterized protein"... 185 2.6e-10 1
WB|WBGene00006787 - symbol:unc-52 species:6239 "Caenorhab... 183 2.8e-10 1
UNIPROTKB|Q06561 - symbol:unc-52 "Basement membrane prote... 183 2.8e-10 1
RGD|620212 - symbol:Nrxn3 "neurexin 3" species:10116 "Rat... 156 3.4e-10 2
UNIPROTKB|Q07310 - symbol:Nrxn3 "Neurexin-3" species:1011... 156 3.4e-10 2
ZFIN|ZDB-GENE-060503-794 - symbol:ush2a "Usher syndrome 2... 143 3.7e-10 2
WARNING: Descriptions of 167 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q16363 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0001568
"blood vessel development" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0031012 "extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0030155
GO:GO:0070062 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pathway_Interaction_DB:amb2_neutrophils_pathway
Pathway_Interaction_DB:foxm1pathway Pfam:PF02210 GO:GO:0045995
GO:GO:0005201 eggNOG:NOG247347 GO:GO:0005606 EMBL:S78569
EMBL:X91171 EMBL:X70904 EMBL:AB210027 EMBL:BT006690 EMBL:Z99289
EMBL:AL590106 EMBL:BC004241 EMBL:Y14240 EMBL:X76939 IPI:IPI00024406
IPI:IPI00329482 IPI:IPI00735310 PIR:S68960 RefSeq:NP_001098676.2
RefSeq:NP_001098677.2 RefSeq:NP_001098678.1 RefSeq:NP_001098679.1
RefSeq:NP_002281.3 UniGene:Hs.654572 ProteinModelPortal:Q16363
SMR:Q16363 IntAct:Q16363 MINT:MINT-1200879 STRING:Q16363
PhosphoSite:Q16363 DMDM:292495093 PaxDb:Q16363 PRIDE:Q16363
DNASU:3910 Ensembl:ENST00000230538 Ensembl:ENST00000368638
Ensembl:ENST00000389463 Ensembl:ENST00000424408
Ensembl:ENST00000453937 Ensembl:ENST00000455073
Ensembl:ENST00000522006 Ensembl:ENST00000578470
Ensembl:ENST00000584877 Ensembl:ENST00000584945 GeneID:3910
KEGG:hsa:3910 UCSC:uc003pvt.2 UCSC:uc003pvu.2 UCSC:uc010kdz.1
CTD:3910 GeneCards:GC06M112475 HGNC:HGNC:6484 HPA:HPA015693
MIM:600133 neXtProt:NX_Q16363 PharmGKB:PA30273 HOVERGEN:HBG052299
InParanoid:Q16363 KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB
PhylomeDB:Q16363 ChiTaRS:LAMA4 GenomeRNAi:3910 NextBio:15351
ArrayExpress:Q16363 Bgee:Q16363 CleanEx:HS_LAMA4
Genevestigator:Q16363 GermOnline:ENSG00000112769 Uniprot:Q16363
Length = 1823
Score = 463 (168.0 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 118/327 (36%), Positives = 170/327 (51%)
Query: 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG 63
Y GT+ +SR E+ + G F K FSI ++T S G+IFYV+D + D++ L++ G
Sbjct: 1470 YQYGGTA-NSRQEFEHLKGDFGAKSQFSIRLRTRSSH-GMIFYVSDQEENDFMTLFLAHG 1527
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
++ Y FN G + + S +K DG WH V F R++ SG+L IDG V E + T
Sbjct: 1528 RLVYMFNVGHKKLKIRSQEKYN-DGLWHDVIFIRERSSGRLVIDGLRVLEESLPPTEATW 1586
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLND--TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD- 180
I GP YLGGV + V+ N+ +N +F GCL NL+ N + + V PC +
Sbjct: 1587 KIKGPIYLGGVAPGKA--VK-NVQINSIYSFSGCLSNLQLNGASITSASQTFSVTPCFEG 1643
Query: 181 KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDG 239
E+G +F GGYV E F +G + E+ +V+PR+ SG L+ HS +Y + M +G
Sbjct: 1644 PMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVHGHSVNGEYLNVHMKNG 1703
Query: 240 SVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPG 299
V V+NG S TP CDG+WH I I+ NV+ + VDS +GP
Sbjct: 1704 QVIVKVNNGIRDFSTSVTPKQS--LCDGRWHRITVIRDSNVVQLDVDSEVNHV--VGPLN 1759
Query: 300 SSETDTNNAVFIGGHPFLSLSSKKSGP 326
D VF+GG P SL + + P
Sbjct: 1760 PKPIDHREPVFVGGVPE-SLLTPRLAP 1785
Score = 133 (51.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 70/310 (22%), Positives = 126/310 (40%)
Query: 19 TITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH--YSFNCGSGPM 76
T G+F F I+++T ++ +G+I + V + L +++G +H Y F GP+
Sbjct: 1064 TRRGKFGQVTRFDIEVRTPAD-NGLILLM--VNGSMFFRLEMRNGYLHVFYDFGFSGGPV 1120
Query: 77 ALSSGDKL--ILDGEWHTVEFS-RQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
L K I D ++H + L +D + V +S + K F Y+GG
Sbjct: 1121 HLEDTLKKAQINDAKYHEISIIYHNDKKMILVVDRRHV---KSMDNEKMKIPFTDIYIGG 1177
Query: 134 VP--LNTSTLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC-SDKTESGVF 187
P + S +R +L L+ F GC++ + K L++ T C D S
Sbjct: 1178 APPEILQSRALRAHLPLDINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRA 1237
Query: 188 FYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDN 247
++N ++ +++ E + + +GLL S D F + + +G+V V
Sbjct: 1238 YFNGQSFIASIQKISFFDGFEGGFNFRTLQPNGLLFYYASGSDVFSISLDNGTVIMDV-- 1295
Query: 248 GKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS--MTTDKPGLGPPGSSETDT 305
KG I S + DG H +++ + + VD + + P G ++
Sbjct: 1296 -KG----IKVQSVDKQYNDGLSHFVISSVSPTRYELIVDKSRVGSKNPTKGKIEQTQASE 1350
Query: 306 NNAVFIGGHP 315
F GG P
Sbjct: 1351 KKFYF-GGSP 1359
Score = 125 (49.1 bits), Expect = 0.00037, P = 0.00037
Identities = 72/286 (25%), Positives = 122/286 (42%)
Query: 37 TSEQDGIIFYVADVK-HIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILD--GEWHTV 93
T D I Y+ +Y+ L +K+ + Y +N G+ + + K + + V
Sbjct: 875 TETADQFILYLGSKNAKKEYMGLAIKNDNLVYVYNLGTKDVEIPLDSKPVSSWPAYFSIV 934
Query: 94 EFSRQQLSGKLKI---------DGQVVAEGESKGSSKTLNIFGP----FYLGGVPLNTST 140
+ R GK+ + + + + +GE G L++ P FY+GGVP N
Sbjct: 935 KIERVGKHGKVFLTVPSLSSTAEEKFIKKGEFSGDDSLLDL-DPEDTVFYVGGVPSNFKL 993
Query: 141 LVRGNLGLNDTFVGCLRNLKSNNKLVQ---DKHT----SSGVIPCS-DK---TESGV--F 187
NL FVGCL NN ++ KH S +PC+ DK T+S +
Sbjct: 994 PTSLNL---PGFVGCLELATLNNDVISLYNFKHIYNMDPSTSVPCARDKLAFTQSRAASY 1050
Query: 188 FYNSGGY--VKGV-EQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKAT 244
F++ GY V+ + + + G+ ++V+ +GL+L + + +F L+M +G +
Sbjct: 1051 FFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLMVNGSMFFRLEMRNGYLHVF 1110
Query: 245 VDNG--KGPISAIYTPSDPYFFCDGQWHTIVAI--KTKNVISVAVD 286
D G GP+ T D ++H I I K +I V VD
Sbjct: 1111 YDFGFSGGPVHLEDTLKKAQIN-DAKYHEISIIYHNDKKMILV-VD 1154
>RGD|1560062 [details] [associations]
symbol:Lama4 "laminin, alpha 4" species:10116 "Rattus
norvegicus" [GO:0001568 "blood vessel development" evidence=ISO]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina" evidence=ISO]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0050873 "brown fat cell differentiation"
evidence=ISO] [GO:0070062 "extracellular vesicular exosome"
evidence=ISO] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0050873 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0001568 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 IPI:IPI00361106
Ensembl:ENSRNOT00000000737 Uniprot:F1LTF8
Length = 1580
Score = 460 (167.0 bits), Expect = 3.8e-42, P = 3.8e-42
Identities = 115/316 (36%), Positives = 163/316 (51%)
Query: 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG 63
Y GT+ +SR E+ I G F K F+I +KT S G+IFYV+D + D++ L++ G
Sbjct: 1227 YQYGGTA-NSRQEFEHIQGDFGEKSQFAIRLKTRSSH-GMIFYVSDQEENDFMTLFLAHG 1284
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
++ + FN G + + S +K DG WH V F R++ SG+L IDG V E S
Sbjct: 1285 RLVFMFNVGHKKLKIRSQEKYS-DGLWHDVIFIREKSSGRLVIDGLRVLEERLPPSDAAW 1343
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLND--TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD- 180
I GP YLGGV + V+ N+ +N +F GCL NL+ N + + V PC +
Sbjct: 1344 KIKGPIYLGGVAPGRA--VK-NVQINSVYSFSGCLGNLQLNGASIASASQTFSVTPCFEG 1400
Query: 181 KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDG 239
E+G +F GGYV E F +G + E+ +V+PR+ SG L+ HS +Y + M G
Sbjct: 1401 PMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVHGHSVNGEYLNVHMKSG 1460
Query: 240 SVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPG 299
V V+NG S TP CDG+WH I I+ NV+ + VDS +GP
Sbjct: 1461 QVIVKVNNGVRDFSTSVTPKQN--LCDGRWHRITVIRDSNVVQLDVDSEVNHV--VGPLN 1516
Query: 300 SSETDTNNAVFIGGHP 315
D VF+GG P
Sbjct: 1517 PKPVDHREPVFVGGVP 1532
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 75/312 (24%), Positives = 130/312 (41%)
Query: 19 TITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH--YSFNCGSGPM 76
T G+F F I+I+T ++ +G++ + V + +L +++G +H Y F +GP+
Sbjct: 822 TRRGKFGQVTRFDIEIRTPAD-NGLVLLM--VNGSMFFSLEMRNGYLHVFYDFGFSNGPV 878
Query: 77 ALSSGDKL--ILDGEWHTVEFS-RQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
L K I D ++H + L +D + V +S + K F Y+GG
Sbjct: 879 HLEDTLKKAQINDAKYHEISIIYHNDKKMILVVDRRHV---KSTDNEKKKIPFTDIYIGG 935
Query: 134 VP---LNTSTLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC-SDKTESGV 186
P L + TL R +L L+ F GC++ + K L++ K T C D S
Sbjct: 936 APQEVLQSRTL-RAHLPLDINFRGCMKGFQFQKKDFNLLEQKETLGVGYGCPEDSLISRR 994
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHS-KKDYFILQMIDGSVKATV 245
++N ++ ++ E + + +GLL S D F + + +G+V V
Sbjct: 995 AYFNGQSFIASTQKISFFDGFEGGFNFRTLQPNGLLFYYASGSDDVFSISLDNGTVVMDV 1054
Query: 246 DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS--MTTDKPGLGPPGSSET 303
KG I S + DG H +V + + VD + + P G ++T
Sbjct: 1055 ---KG----IKVKSADKQYHDGLSHFVVTTVSATRYELVVDKSRLGSKNPTKGKAEPTQT 1107
Query: 304 DTNNAVFIGGHP 315
T + GG P
Sbjct: 1108 -TEKKFYFGGSP 1118
>UNIPROTKB|F1RZM4 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 OMA:QLDDYNA
EMBL:CU302401 Ensembl:ENSSSCT00000004890 ArrayExpress:F1RZM4
Uniprot:F1RZM4
Length = 1471
Score = 459 (166.6 bits), Expect = 4.3e-42, P = 4.3e-42
Identities = 116/327 (35%), Positives = 169/327 (51%)
Query: 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG 63
Y GT+ +SR E+ + G F K FSI +KT S G+IFYV+D + D++ L++ G
Sbjct: 1118 YQYGGTA-NSRQEFEHLKGDFGEKSQFSIRLKTRSSH-GMIFYVSDPEENDFMTLFLAHG 1175
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
++ + FN G + + S +K DG WH V F R++ SG+L IDG V E + T
Sbjct: 1176 RLVFMFNVGHKKLKIRSQEKYN-DGLWHDVIFIREKSSGRLIIDGLRVLEESLPPTGATW 1234
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLND--TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD- 180
I GP YLGGV + V+ N+ +N +F GCL NL+ N + + V PC +
Sbjct: 1235 KIKGPIYLGGVAPGRA--VK-NVQINSVYSFSGCLSNLQLNGASISSASQTFSVTPCFEG 1291
Query: 181 KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDG 239
E+G +F GGYV E F +G + E+ +V+PR+ SG+ + HS +Y + M +G
Sbjct: 1292 PMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGIFVHGHSVNGEYLNVHMKNG 1351
Query: 240 SVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPG 299
V V+NG S P CDG+WH I I+ NV+ + VDS +GP
Sbjct: 1352 QVIVKVNNGIRDFSTSVAPKQS--LCDGRWHRITVIRDSNVVQLDVDSEVNHV--VGPLN 1407
Query: 300 SSETDTNNAVFIGGHPFLSLSSKKSGP 326
D VF+GG P SL + + P
Sbjct: 1408 PKPVDHREPVFVGGVPE-SLLTPRLAP 1433
Score = 149 (57.5 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 75/315 (23%), Positives = 130/315 (41%)
Query: 19 TITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH--YSFNCGSGPM 76
T G+F F I+++T ++ +G++ + V + +L +++G +H Y F SGP+
Sbjct: 707 TRRGKFGQVTRFDIEVRTPAD-NGLVLLM--VNGSMFFSLEMRNGYLHVFYDFGFSSGPV 763
Query: 77 ALSSGDKL--ILDGEWHTVEFS-RQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
L K I D ++H + L +D + V +S + K F Y+GG
Sbjct: 764 HLEDTMKKAQINDAKYHEISIIYHNDKKMILVVDRRHV---KSMDNEKMKIPFTDIYIGG 820
Query: 134 VP---LNTSTLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC-SDKTESGV 186
P L +S +R +L L F GC++ + K L++ T C D S
Sbjct: 821 APPEILQSSRTLRAHLPLEINFRGCMKGFQFQKKDFNLLEQTETLGIGYGCPEDSLISRR 880
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVD 246
++N ++ V++ E + + +GLL S D F + + +G+V T+D
Sbjct: 881 AYFNGQSFIASVQKISFFDGFEGGFNFRTLQPNGLLFYYASGSDVFSISLDNGTV--TMD 938
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGP--PGSSETD 304
+ I S + DG H I+ +S A + DK LG P + +
Sbjct: 939 -----VKGIKVQSADKQYNDGLSHFIITS-----VSPARYELIVDKSRLGSKNPTKGKVE 988
Query: 305 TNNA----VFIGGHP 315
A + GG P
Sbjct: 989 QTQAGEKKFYFGGSP 1003
Score = 126 (49.4 bits), Expect = 0.00023, P = 0.00023
Identities = 80/318 (25%), Positives = 133/318 (41%)
Query: 44 IFYVADVKHI--DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWH--TVEFSRQQ 99
I Y+ KH +Y+ L +K+ + Y +N G+ + + K + H V+ R
Sbjct: 525 ILYLGS-KHAKKEYMGLAIKNDNLVYVYNLGTKDVEIPLDSKPVSSWPAHFSIVKIERVG 583
Query: 100 LSGKLKI---------DGQVVAEGESKGSSKTLNIFGP----FYLGGVPLNTSTLVRGNL 146
GK+ + + + + +GE G L++ P FY+GGVP N NL
Sbjct: 584 KHGKVFLTVPSLSSTAEEKFIKKGEFAGDDSLLDL-DPEDTVFYVGGVPSNFKLPASLNL 642
Query: 147 GLNDTFVGCLRNLKSNNKLVQ---DKHT----SSGVIPCS-DK---TESGV--FFYNSGG 193
FVGCL NN ++ KH S +PC+ DK T+S +F++
Sbjct: 643 ---PGFVGCLELATLNNDVISLYNFKHIYNMDPSKSVPCARDKLAFTQSRAASYFFDGSS 699
Query: 194 Y--VKGV-EQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNG-- 248
Y V+ + + + G+ ++V+ +GL+L + + +F L+M +G + D G
Sbjct: 700 YAVVRDITRRGKFGQVTRFDIEVRTPADNGLVLLMVNGSMFFSLEMRNGYLHVFYDFGFS 759
Query: 249 KGPISAIYTPSDPYFFCDGQWHTIVAI--KTKNVISVAVDSMTTDKPGLGPPGSSETDTN 306
GP+ T D ++H I I K +I V VD TD
Sbjct: 760 SGPVHLEDTMKKAQIN-DAKYHEISIIYHNDKKMILV-VDRRHVKSMDNEKMKIPFTD-- 815
Query: 307 NAVFIGGHPFLSLSSKKS 324
++IGG P L S ++
Sbjct: 816 --IYIGGAPPEILQSSRT 831
>UNIPROTKB|F1P420 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0032224
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:NCNSFGS EMBL:AADN02049678 EMBL:AADN02049679 EMBL:AADN02049680
EMBL:AADN02049681 EMBL:AADN02049682 EMBL:AADN02049683
EMBL:AADN02049684 EMBL:AADN02049685 EMBL:AADN02049686
EMBL:AADN02049687 EMBL:AADN02049688 EMBL:AADN02049689
EMBL:AADN02049690 EMBL:AADN02049691 EMBL:AADN02049692
EMBL:AADN02049693 EMBL:AADN02049694 EMBL:AADN02049695
EMBL:AADN02049696 EMBL:AADN02049697 EMBL:AADN02049698
EMBL:AADN02049699 EMBL:AADN02049700 EMBL:AADN02049701
EMBL:AADN02049702 EMBL:AADN02049703 EMBL:AADN02049704
EMBL:AADN02049705 EMBL:AADN02049706 EMBL:AADN02049707
IPI:IPI00582275 Ensembl:ENSGALT00000022704 Uniprot:F1P420
Length = 3090
Score = 457 (165.9 bits), Expect = 2.0e-41, P = 2.0e-41
Identities = 104/312 (33%), Positives = 170/312 (54%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S I + KN+ +++T ++ G++FY+A + H D+ + +K+G ++
Sbjct: 2736 GLSRNSHIAIAFDDTKVKNRLTIEFEVRTMADS-GLLFYMARINHADFATVQIKNGLPYF 2794
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG +K I DG+WH ++ R + G L +DG V S + L++ G
Sbjct: 2795 SYDLGSGDTNTMIPNK-INDGQWHKIKVIRTKQEGNLIVDG-VSNRTVSPKKADILDVVG 2852
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSS-GVIPCSDKTESG 185
Y+GG+P+N +T G + + GC+RN K V D TSS V C + G
Sbjct: 2853 MLYVGGLPVNYTTRRIGPVTYS--IDGCIRNFKMTESPVDLDNPTSSFSVGKCFVTAQKG 2910
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V ++VG ++ ++ + + ++G+LL V S+K D ++++DG V
Sbjct: 2911 TYF-DGTGFAKTVGAYKVGTDLLVEFEFRTTRMNGVLLGVSSQKMDGLGIELVDGKVMFH 2969
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPP-GSSET 303
VDNG G SA+Y P P CDGQWH +VA K K+ + + VD D G P S+
Sbjct: 2970 VDNGAGRFSAVYEPDAPASLCDGQWHKVVANKIKHRLELTVDDRQVD--GSSPNRASTSA 3027
Query: 304 DTNNAVFIGGHP 315
DTN+ VF+GG+P
Sbjct: 3028 DTNDPVFVGGYP 3039
Score = 111 (44.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/136 (24%), Positives = 66/136 (48%)
Query: 32 IDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWH 91
+++KT D ++FY+ K D++A+ ++ G++ + ++ GSG + D + DG W+
Sbjct: 2137 VNVKTVVA-DNLLFYLGSAKFTDFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTVDDGFWY 2195
Query: 92 TVEFSRQQLSGKLKI---DG---QVVA---EGESKGSSKTLNIFGP--FYLGGVPLNTST 140
+E SR +G + + DG +V G S L++ ++GG+ T
Sbjct: 2196 RIEASRTGKNGTISVRALDGPKASIVPATFSGVSPPGYTILDVDANALLFVGGL---TGK 2252
Query: 141 LVRGNLGLNDTFVGCL 156
+ + + TF GC+
Sbjct: 2253 IKKSDAVRVTTFTGCM 2268
Score = 71 (30.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/112 (25%), Positives = 48/112 (42%)
Query: 221 LLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWH--TIVAI-KT 277
+ L+ KD+ +++ G +K + D G G S T + + DG+W T+ I K
Sbjct: 2343 MYLATEDLKDFMSVELSGGRIKVSYDLGSGTASV--TSNQNHN--DGKWKSFTLSRIQKH 2398
Query: 278 KNVISVAVDSMTTDKPGLGPPGSS---ETDTNNAVFIGGHPFLSLSSKKSGP 326
N+ V +D+ + GS + ++ GG P L S K+ P
Sbjct: 2399 ANISIVDIDTNEEETIATTSTGSHFGLNLKGHEKIYFGGLPTLRNLSMKARP 2450
Score = 68 (29.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 44/201 (21%), Positives = 79/201 (39%)
Query: 130 YLGGVPL--NTSTLVRGNLGLNDTFVGCLRNLKSNNKL--VQDKHTSSGVIP-CSDKTES 184
Y GG+P N S R + L + GCL+ ++ + + G+ C+ +
Sbjct: 2434 YFGGLPTLRNLSMKARPEVNLKK-YTGCLKEIEISRTPYNILSSPDFVGLTKGCTLENIY 2492
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRN------ISGLLLSVHSKKD-----YFI 233
V F G F VG E+ L K + SG ++ K+ Y+
Sbjct: 2493 TVSFPKQGFVEMPPVSFDVGTEINLSFSTKNESGIILFGSSGTVVPPRRKRRQTGQAYYA 2552
Query: 234 LQMIDGSVKATVDNG-KGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDK 292
+ + G ++ + G + P P + F DG+ H++ ++K + SV VD
Sbjct: 2553 VFLNRGRLEVHISTGIQDPHRITIRP-EAVKFHDGRAHSVRIERSKGMFSVQVDEDKVQS 2611
Query: 293 PGLGPPGSSETDTNNAVFIGG 313
L P + + + +F+GG
Sbjct: 2612 QRL-P--TDQPISVRKLFVGG 2629
>UNIPROTKB|F1PR66 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 OMA:QLDDYNA EMBL:AAEX03008620
Ensembl:ENSCAFT00000006483 Uniprot:F1PR66
Length = 1760
Score = 450 (163.5 bits), Expect = 5.2e-41, P = 5.2e-41
Identities = 116/327 (35%), Positives = 167/327 (51%)
Query: 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG 63
Y GT+ +SR E+ + F K FSI +KT S G+IFYV+D + D++ L++ G
Sbjct: 1407 YQYGGTA-NSRQEFEHLKRDFGEKSQFSIRLKTRSSH-GMIFYVSDQEENDFMTLFLAHG 1464
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
++ + FN G + + S +K DG WH V F R++ SG+L IDG V E +
Sbjct: 1465 RLVFMFNVGHKKLKIRSQEKYN-DGVWHDVIFIREKSSGRLIIDGLRVLEESLPPTGAAW 1523
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLND--TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD- 180
NI GP YLGGV + V+ N+ +N +F GCL NL+ N + + V PC +
Sbjct: 1524 NIKGPIYLGGVAPGRA--VK-NVQINSVYSFSGCLGNLQLNGASITSASQTFSVTPCFEG 1580
Query: 181 KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDG 239
E+G +F GGYV E F +G + E+ +V+PR+ SG L+ HS +Y + M G
Sbjct: 1581 PMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVHGHSVNGEYLNVHMKKG 1640
Query: 240 SVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPG 299
V V+NG S P CDG+WH I I+ NV+ + VDS +GP
Sbjct: 1641 QVVVKVNNGIRDFSTSVMPKQS--LCDGRWHRITVIRDSNVVQLDVDSEVNHV--VGPLN 1696
Query: 300 SSETDTNNAVFIGGHPFLSLSSKKSGP 326
D VF+GG P SL + + P
Sbjct: 1697 PKPVDHREPVFVGGVPE-SLLTPRLAP 1722
Score = 143 (55.4 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 73/311 (23%), Positives = 127/311 (40%)
Query: 19 TITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH--YSFNCGSGPM 76
T G+F F I+++T ++ +G+I + V + +L +++G +H Y F +GP+
Sbjct: 1001 TRRGKFGQVTRFDIEVRTPAD-NGLILLM--VNGSMFFSLEMRNGYLHVFYDFGFSNGPV 1057
Query: 77 ALSSGDKL--ILDGEWHTVEFS-RQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
L K I D ++H + L +D + V +S + K F Y+GG
Sbjct: 1058 HLEDTSKRAQINDAKYHEISIIYHNDKKMILVVDRRHV---KSMDNEKMKIPFTDIYIGG 1114
Query: 134 VP---LNTSTLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC-SDKTESGV 186
P L + TL R +L L+ F GC++ + K L++ T C D S
Sbjct: 1115 APPEILQSRTL-RAHLPLDINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRR 1173
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVD 246
++N ++ V++ E + + +GLL S D F + + +G+V V
Sbjct: 1174 AYFNGQSFIASVQKMSFFDGFEGGFNFRTLQPNGLLFYYASGADVFSISLDNGTVVLDV- 1232
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS--MTTDKPGLGPPGSSETD 304
KG I S + DG H ++ + + VD + + P G G
Sbjct: 1233 --KG----IKVQSADKQYNDGLSHLVITSVSPARYELIVDKSRLGSKNPTKGK-GEQTQA 1285
Query: 305 TNNAVFIGGHP 315
+ GG P
Sbjct: 1286 GEKKFYFGGSP 1296
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 72/283 (25%), Positives = 123/283 (43%)
Query: 41 DGIIFYVADVKHI--DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILD--GEWHTVEFS 96
D + Y+ KH +Y+ L +K+ + Y +N G+ + + K + + V+
Sbjct: 816 DRFVLYLGS-KHAKKEYMGLAIKNDNLVYVYNLGTKDVEIPLDSKPVSSWPAYFSIVKIE 874
Query: 97 RQQLSGKLKI---------DGQVVAEGESKGSSKTLNIFGP----FYLGGVPLNTSTLVR 143
R GK+ + + + + +GE G L++ P FY+GGVP N
Sbjct: 875 RVGKHGKVFLTVPSLSSTAEEKFIKKGEFAGDDSLLDL-DPEDTVFYVGGVPSNFKLPAS 933
Query: 144 GNLGLNDTFVGCLRNLKSNNKLVQ---DKHT----SSGVIPCS-DK---TESGV--FFYN 190
NL FVGCL NN ++ KH S +PC+ DK T+S +F++
Sbjct: 934 LNL---PGFVGCLELATLNNDVISLYNFKHIYNMDPSKSVPCARDKLAFTQSRAASYFFD 990
Query: 191 SGGY--VKGV-EQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDN 247
Y V+ + + + G+ ++V+ +GL+L + + +F L+M +G + D
Sbjct: 991 GSSYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLMVNGSMFFSLEMRNGYLHVFYDF 1050
Query: 248 G--KGPISAIYTPSDPYFFCDGQWHTIVAI--KTKNVISVAVD 286
G GP+ T S D ++H I I K +I V VD
Sbjct: 1051 GFSNGPVHLEDT-SKRAQINDAKYHEISIIYHNDKKMILV-VD 1091
>MGI|MGI:109321 [details] [associations]
symbol:Lama4 "laminin, alpha 4" species:10090 "Mus musculus"
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005606 "laminin-1
complex" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IDA] [GO:0070062
"extracellular vesicular exosome" evidence=ISO] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 MGI:MGI:109321
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
eggNOG:NOG247347 GO:GO:0005606 CTD:3910 HOVERGEN:HBG052299
KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB ChiTaRS:LAMA4 EMBL:U58950
EMBL:Y09827 EMBL:U59865 EMBL:BC115942 EMBL:U88352 EMBL:U69176
IPI:IPI00223446 RefSeq:NP_034811.2 UniGene:Mm.258065
ProteinModelPortal:P97927 SMR:P97927 STRING:P97927
PhosphoSite:P97927 PaxDb:P97927 PRIDE:P97927
Ensembl:ENSMUST00000019992 GeneID:16775 KEGG:mmu:16775
UCSC:uc007evq.2 HOGENOM:HOG000113278 InParanoid:Q14BF2
NextBio:290616 Bgee:P97927 CleanEx:MM_LAMA4 Genevestigator:P97927
GermOnline:ENSMUSG00000019846 Uniprot:P97927
Length = 1816
Score = 448 (162.8 bits), Expect = 9.0e-41, P = 9.0e-41
Identities = 116/327 (35%), Positives = 167/327 (51%)
Query: 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG 63
Y GT+ +SR E+ G F K F+I +KT S G+IFYV+D + D++ L++ G
Sbjct: 1463 YQYGGTA-NSRQEFEHEQGDFGEKSQFAIRLKTRSSH-GMIFYVSDQEENDFMTLFLAHG 1520
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
++ + FN G + + S +K DG WH V F R++ SG+L IDG V E S
Sbjct: 1521 RLVFMFNVGHKKLKIRSQEKYN-DGLWHDVIFIREKSSGRLVIDGLRVLEERLPPSGAAW 1579
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLND--TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD- 180
I GP YLGGV + V+ N+ + +F GCL NL+ N + + V PC +
Sbjct: 1580 KIKGPIYLGGVAPGRA--VK-NVQITSVYSFSGCLGNLQLNGASITSASQTFSVTPCFEG 1636
Query: 181 KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDG 239
E+G +F GGYV E F +G + E+ +V+PR+ SG L+ HS +Y + M +G
Sbjct: 1637 PMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVHGHSVNGEYLNVHMRNG 1696
Query: 240 SVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPG 299
V V+NG S TP CDG+WH I I+ NV+ + VDS +GP
Sbjct: 1697 QVIVKVNNGVRDFSTSVTPKQN--LCDGRWHRITVIRDSNVVQLDVDSEVNHV--VGPLN 1752
Query: 300 SSETDTNNAVFIGGHPFLSLSSKKSGP 326
D VF+GG P SL + + P
Sbjct: 1753 PKPVDHREPVFVGGVPE-SLLTPRLAP 1778
Score = 151 (58.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 74/311 (23%), Positives = 130/311 (41%)
Query: 19 TITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH--YSFNCGSGPM 76
T G+F F I+I+T ++ +G++ + V + +L +++G +H Y F +GP+
Sbjct: 1059 TRRGKFGQVTRFDIEIRTPAD-NGLVLLM--VNGSMFFSLEMRNGYLHVFYDFGFSNGPV 1115
Query: 77 ALSSGDKL--ILDGEWHTVEFS-RQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
L K I D ++H + L +D + V +S + K F Y+GG
Sbjct: 1116 HLEDTLKKAQINDAKYHEISIIYHNDKKMILVVDRRHV---KSTDNEKKKIPFTDIYIGG 1172
Query: 134 VP---LNTSTLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC-SDKTESGV 186
P L + TL R +L L+ F GC++ + K L++ T C D S
Sbjct: 1173 APQEVLQSRTL-RAHLPLDINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRR 1231
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVD 246
++N ++ +++ E + + +GLL S D F + + +G+V V
Sbjct: 1232 AYFNGQSFIASIQKISFFDGFEGGFNFRTLQPNGLLFYYTSGSDVFSISLDNGTVVMDV- 1290
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS--MTTDKPGLGPPGSSETD 304
KG I + T + DG H +V + + VD + P G ++T
Sbjct: 1291 --KG-IKVMSTDKQ---YHDGLPHFVVTSISDTRYELVVDKSRLRGKNPTKGKAEQTQT- 1343
Query: 305 TNNAVFIGGHP 315
T + GG P
Sbjct: 1344 TEKKFYFGGSP 1354
>UNIPROTKB|F1NSZ5 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0050873 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 OMA:QLDDYNA
EMBL:AADN02002050 EMBL:AADN02002048 EMBL:AADN02002049
IPI:IPI00578400 Ensembl:ENSGALT00000024193 Uniprot:F1NSZ5
Length = 1766
Score = 446 (162.1 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 112/322 (34%), Positives = 169/322 (52%)
Query: 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG 63
Y GT+ +SR E+ + F + FSI +KT S G+IFYV+D K +++ L+V G
Sbjct: 1413 YQFGGTA-NSRQEFDHLPKDFSERAQFSISLKTHSSH-GMIFYVSDQKETNFMTLFVAHG 1470
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
++ + FN G + + S +K DG WH V F R + G+L IDG V E ++ T
Sbjct: 1471 RLIFMFNAGHQKIRIKSQEKYN-DGLWHNVIFIRGKNIGRLIIDGLRVLEETFNVNANTW 1529
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLND--TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD- 180
+ P Y+GGV + V+ N+ +N +F GCL NL+ N + + + V PC +
Sbjct: 1530 QVTEPLYIGGVAPGKA--VK-NIQINSVYSFSGCLSNLQLNGRSITSASQTFSVTPCFEG 1586
Query: 181 KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDG 239
+E+G +F + GGYV E F +G + E+ +++PR+ SG+LL HS +Y + M +G
Sbjct: 1587 PSEAGTYFSSEGGYVVLDESFSLGLKFEVVFEIRPRSSSGILLHGHSVNGEYLNMHMRNG 1646
Query: 240 SVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPG 299
V ++NG S T CDG+WH I I+ NV+ + VDS +GP
Sbjct: 1647 QVTVKLNNGIRDFSTSVTLKQS--LCDGRWHRIAVIRDANVVQLDVDSEVNHV--VGPLN 1702
Query: 300 SSETDTNNAVFIGGHPFLSLSS 321
TD VFIGG P L+S
Sbjct: 1703 PKATDHREPVFIGGVPESLLTS 1724
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 76/318 (23%), Positives = 130/318 (40%)
Query: 22 GRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH--YSFNCGSGPMALS 79
GRF F I+++T S+ +G+I + V + +L + +G ++ Y F +GP L
Sbjct: 1008 GRFSQVTRFDIEVRTPSD-NGLILLM--VNGSMFFSLEMHNGFLYLRYDFGFSTGPALLE 1064
Query: 80 SGDKL--ILDGEWHTVEFSRQQLSGK--LKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP 135
K I D ++H + S K L +D + + +S + +T F Y+GG P
Sbjct: 1065 DSMKKAQINDAKFHEISIIYHN-SKKMILVVDRRHI---KSIDNERTAMPFTDIYIGGAP 1120
Query: 136 LNT--STLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC-SDKTESGVFFY 189
S+ + +L F GC++ + K L+++ T C D S ++
Sbjct: 1121 AEVLQSSSISSHLAGIIGFKGCMKGFQFQKKDFNLLEEPGTLGISYGCPEDSLISRKAYF 1180
Query: 190 NSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGK 249
N ++ ++ + E E + + +GLL D + M G+V V N
Sbjct: 1181 NGESFIASSQKVSLLSEFEGGFNFRTLQPNGLLFYYSEGSDVLSISMDRGAV---VLNAS 1237
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDK--PGLGPPGSSETDTNN 307
G I +P Y DG+ H IV T ++VD K P G S D+
Sbjct: 1238 G--IKIQSPDRNYN--DGKTHFIVTSVTPERYELSVDDKKQSKKNPVKDRAGKSP-DSIK 1292
Query: 308 AVFIGGHPFLSLSSKKSG 325
+ GG P + + +G
Sbjct: 1293 KFYFGGSPLKTQQANFTG 1310
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/163 (27%), Positives = 76/163 (46%)
Query: 7 AGTSKSSRIEYPTITGRFKN--KFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQ 64
AGT SS Y + F KF+ +I+ S GI+ + V +Y+ +++++GQ
Sbjct: 1590 AGTYFSSEGGYVVLDESFSLGLKFEVVFEIRPRSSS-GILLHGHSVNG-EYLNMHMRNGQ 1647
Query: 65 IHYSFNCGSGPMALSSGDKLIL-DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+ N G + S K L DG WH + R +L +D +V + K
Sbjct: 1648 VTVKLNNGIRDFSTSVTLKQSLCDGRWHRIAVIRDANVVQLDVDSEV-NHVVGPLNPKAT 1706
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV 166
+ P ++GGVP +L+ +L ++F+GC+RN + K V
Sbjct: 1707 DHREPVFIGGVP---ESLLTSSLTTRNSFIGCIRNFMIDEKTV 1746
>FB|FBgn0002526 [details] [associations]
symbol:LanA "Laminin A" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0035001 "dorsal trunk
growth, open tracheal system" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016321
"female meiosis chromosome segregation" evidence=IMP] [GO:0007498
"mesoderm development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0001964 "startle
response" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0002121 "inter-male aggressive
behavior" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0035011 "melanotic encapsulation
of foreign target" evidence=IMP] [GO:0036062 "presynaptic
periactive zone" evidence=IDA] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0007507 EMBL:AE014296 GO:GO:0030155
GO:GO:0007498 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 GO:GO:0002121
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007476 GO:GO:0016321 GO:GO:0048854
Pfam:PF02210 GO:GO:0031987 GO:GO:0001964 GO:GO:0045995
GO:GO:0035011 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0035001 GO:GO:0005606 KO:K06240 EMBL:M96388 EMBL:L07288
EMBL:M75882 PIR:S28399 RefSeq:NP_476617.1 UniGene:Dm.865
ProteinModelPortal:Q00174 SMR:Q00174 MINT:MINT-754541 STRING:Q00174
PaxDb:Q00174 PRIDE:Q00174 GeneID:38723 KEGG:dme:Dmel_CG10236
CTD:38723 FlyBase:FBgn0002526 InParanoid:Q00174 OrthoDB:EOG4KKWHR
ChiTaRS:LanA GenomeRNAi:38723 NextBio:810058 Bgee:Q00174
GermOnline:CG10236 Uniprot:Q00174
Length = 3712
Score = 447 (162.4 bits), Expect = 2.9e-40, P = 2.9e-40
Identities = 108/314 (34%), Positives = 169/314 (53%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
+ R++ ++ + + D I +T +G++ Y + D++A+Y+ DG++ Y
Sbjct: 3356 REQRLQINSLPVKVRRHHDIGISFRT-ERPNGLLIYAGSKQRDDFIAVYLLDGRVTYEIR 3414
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-----GQVVAEGESKGSSKTLNI 125
G+ A + + + DG WHTVE R Q L ID G V E S+ L +
Sbjct: 3415 VGAQLQAKITTEAELNDGTWHTVEVVRTQRKVSLLIDKLEQPGSVDLNAER--SAPVLAV 3472
Query: 126 FGPFYLGGVPLNTSTLVRGNLGLNDT----FVGCLRNLKSNNKLVQDKHTSSGVIPCSDK 181
P YLGGV + V+ NL T F GCL+N+K + ++ GV+PCS++
Sbjct: 3473 ELPIYLGGVNKFLESEVK-NLTDFKTEVPYFNGCLKNIKFDAMDLETPPEEFGVVPCSEQ 3531
Query: 182 TESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSV 241
E G+FF N +VK + F VG EM++ D +PR+ +GLL SVH K Y IL+++D ++
Sbjct: 3532 VERGLFFNNQKAFVKIFDHFDVGTEMKISFDFRPRDPNGLLFSVHGKNSYAILELVDNTL 3591
Query: 242 KATVDNG-KGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGS 300
TV K +S Y + FCDG+ + AIK+K VI++AVD ++++ PG+G GS
Sbjct: 3592 YFTVKTDLKNIVSTNYKLPNNESFCDGKTRNVQAIKSKFVINIAVDFISSN-PGVGNEGS 3650
Query: 301 SETDTNNAVFIGGH 314
T TN +F+GGH
Sbjct: 3651 VITRTNRPLFLGGH 3664
Score = 181 (68.8 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 72/303 (23%), Positives = 128/303 (42%)
Query: 20 ITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS 79
+ R +F F D K TS +G++F+ KH Y+++ + DG I ++ + G G S
Sbjct: 2895 LKSRSSIQFSFKAD-KDTS--NGLLFFYGRDKH--YMSIEMIDGAIFFNISLGEGGGVQS 2949
Query: 80 SGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESK-GSSKTLNIFGPFYLGGVPLNT 138
D +WH V+ R+ +G LK+D V++ + + L Y GG P
Sbjct: 2950 GSQDRYNDNQWHKVQAERENRNGLLKVDDIVISRTNAPLEADLELPKLRRLYFGGHPRRL 3009
Query: 139 STLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSSGVIP--CSDKTESGVFFY-NSGGY 194
+T ++ L F GC+ N+ N +V ++ + G + CS K + V + + G+
Sbjct: 3010 NT----SISLQPNFDGCIDNVVINQGVVDLTEYVTGGGVEEGCSAKFSTVVSYAPHEYGF 3065
Query: 195 VKGVEQFRVGREMELKMDVKPRNISGLLLSV--HSKKDYFILQMIDGSVKATVDNGKGPI 252
++ + + + + K +G+L H + L + DG +K N G
Sbjct: 3066 LR-MNNVSSDNNLHVVLHFKTTQPNGVLFYAANHDQSSTIGLSLQDGLLKL---NSMGSQ 3121
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG 312
I D DG+ H + T+ + + VD + D LG P + + +F
Sbjct: 3122 LVI----DDRILNDGEDHVVTVQHTQGELRLTVDDV--DNKRLGSPQPLILEGGD-IFFA 3174
Query: 313 GHP 315
G P
Sbjct: 3175 GLP 3177
>UNIPROTKB|F1MYX9 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0001568 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 CTD:3910 KO:K06241
OMA:QLDDYNA EMBL:DAAA02025880 EMBL:DAAA02025869 EMBL:DAAA02025870
EMBL:DAAA02025871 EMBL:DAAA02025872 EMBL:DAAA02025873
EMBL:DAAA02025874 EMBL:DAAA02025875 EMBL:DAAA02025876
EMBL:DAAA02025877 EMBL:DAAA02025878 EMBL:DAAA02025879
IPI:IPI01003454 RefSeq:NP_001192894.1 UniGene:Bt.33367
ProteinModelPortal:F1MYX9 PRIDE:F1MYX9 Ensembl:ENSBTAT00000011612
GeneID:529670 KEGG:bta:529670 NextBio:20875080 Uniprot:F1MYX9
Length = 1824
Score = 443 (161.0 bits), Expect = 3.1e-40, P = 3.1e-40
Identities = 114/327 (34%), Positives = 168/327 (51%)
Query: 4 YVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG 63
Y GT+ +SR E+ + F K FSI +KT S G+IFYV+D + +++ L++ G
Sbjct: 1471 YQYGGTA-NSRQEFEHLKRDFGEKSQFSIRLKTRSSH-GMIFYVSDQEENNFMTLFLAHG 1528
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
++ + FN G + + S +K DG WH V F R++ SG++ IDG V E +
Sbjct: 1529 RLVFMFNVGHKKLKIRSQEKYN-DGLWHDVIFIREKSSGRMIIDGLRVLEESLPPTGADW 1587
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLND--TFVGCLRNLKSNNKLVQDKHTSSGVIPCSD- 180
I GP YLGGV + V+ N+ +N +F GCL NL+ N + + V PC +
Sbjct: 1588 KIRGPIYLGGVAPGRA--VK-NVQINSVYSFSGCLSNLQLNGASITSASQTFSVTPCFEG 1644
Query: 181 KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDG 239
E+G +F GGYV E F +G + E+ +V+PR+ SG L+ HS +Y + M +G
Sbjct: 1645 PMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVHGHSVNGEYLNVHMKNG 1704
Query: 240 SVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPG 299
V V+NG S TP CDG+WH I I+ NV+ + VDS +GP
Sbjct: 1705 QVIVKVNNGIRDFSTSVTPKQS--LCDGRWHRITVIRDSNVVQLDVDSEVNHV--VGPLN 1760
Query: 300 SSETDTNNAVFIGGHPFLSLSSKKSGP 326
D VF+GG P SL + + P
Sbjct: 1761 PKPVDHREPVFVGGVPE-SLLTPRLAP 1786
Score = 141 (54.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 74/311 (23%), Positives = 127/311 (40%)
Query: 19 TITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH--YSFNCGSGPM 76
T G+F F I+++T ++ +G++ + V + +L ++ G +H Y F +GP+
Sbjct: 1065 TRRGKFGQVTRFDIEVRTPAD-NGLVLLM--VNGSMFFSLEMRSGYLHVFYDFGFSNGPV 1121
Query: 77 ALSSGDKL--ILDGEWHTVEFS-RQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
L K I D ++H + L +D + V +S + K F Y+GG
Sbjct: 1122 HLEDTLKKAQINDAKYHEISIIYHNDKKMILVVDRRHV---KSMDNEKMKIPFTDIYIGG 1178
Query: 134 VP---LNTSTLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC-SDKTESGV 186
P L + TL R +L L+ F GC++ + K L++ T C D S
Sbjct: 1179 APPEILQSRTL-RAHLPLDINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRR 1237
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVD 246
++N Y+ ++ E + + +GLL S D F + + +G+V V
Sbjct: 1238 AYFNGQSYIASSQKISFFDGFEGGFNFRTLQPNGLLFYYASGSDMFSISLNNGTVIMDV- 1296
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS--MTTDKPGLGPPGSSETD 304
KG I S + DG H I+ + + VD + + P G ++ D
Sbjct: 1297 --KG----IKVQSADKQYNDGLSHFIITSVSPARYELIVDKSRLGSKNPTKGKVEQTQAD 1350
Query: 305 TNNAVFIGGHP 315
F GG P
Sbjct: 1351 EKKFYF-GGSP 1360
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 441 (160.3 bits), Expect = 1.0e-39, P = 1.0e-39
Identities = 98/313 (31%), Positives = 170/313 (54%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S + + + N+ +++T ++ G++FY+A + H D+ + +K+G H
Sbjct: 2769 GLSRNSHMSFEFDDRKVMNRLVIEFEMRTETDS-GLVFYMARINHADFATIQLKEGMAHL 2827
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
SF+ GSG ++S ++I DG+WH + R + G L IDG+ S ++ L++ G
Sbjct: 2828 SFDLGSGNTSVSV-PRIINDGQWHKIRVMRDKQRGVLTIDGRYSKHTTSPKKAEILDVVG 2886
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNN-KLVQDKHTSS-GVIPCSDKTESG 185
Y+GG+PLN +T G + + C+RN K N L + TSS V C E G
Sbjct: 2887 MLYVGGLPLNYTTKRIGPVLYS--IDACIRNFKMMNLPLDMENPTSSYRVGSCFANPEKG 2944
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F N GY K VE +RVG ++ + ++ + S +L+ V S+K D +++++G +
Sbjct: 2945 NYF-NGTGYAKAVEAYRVGNDVSVDLEFRTAQSSAVLVGVSSQKMDGLGIELVNGKLFFH 3003
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD--KPGLGPPGSSE 302
DNG G +A++ P CDGQWHT+ A K K+ + + VD ++ P + P +
Sbjct: 3004 ADNGVGRFTAVHEPRQEAGLCDGQWHTVSAHKLKHRLELTVDGQKSEAASPDIRSPSA-- 3061
Query: 303 TDTNNAVFIGGHP 315
DTN+ +++GG+P
Sbjct: 3062 -DTNDPLYVGGYP 3073
Score = 154 (59.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 63/284 (22%), Positives = 118/284 (41%)
Query: 32 IDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWH 91
+ +KT + D ++FY+ K++D++A+ ++ G++++ ++ GSG + D +I DG WH
Sbjct: 2146 LHLKTLAA-DNLLFYLGSAKYVDFLAIEMRKGKVNFLWDVGSGVGRVEYPDLIINDGNWH 2204
Query: 92 TVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL-NIFGP--FYLGGVPLNTSTLVRGNLGL 148
+E SR L+G + + EG G +L + P + + V N V G LG
Sbjct: 2205 RIEASRIGLNGSISVRA---LEGPKTGILPSLRSAKAPETYTVLDVDQNAYLFVGGMLGS 2261
Query: 149 --------NDTFVGCLRNLKSNNKLV-------QDKHTSSGVIPCSDKTESGVFFYNSGG 193
TF GC+ + K + +D + V+ G ++ G
Sbjct: 2262 VKKADAVKTTTFSGCMGETSLDGKPIGLWNYRERDGDCAGCVVSPQPADTEGTVQFDGDG 2321
Query: 194 YVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPIS 253
Y V R +V S HS YF + + + A + +G+ +S
Sbjct: 2322 YAS------VSRPTRWNPNVSTVMFKFRTFSTHSVIMYFATKDMKDFMSAELSDGRVKVS 2375
Query: 254 ---AIYTPS--DPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDK 292
T S + DG+W + + K ++ + +M T++
Sbjct: 2376 YDLGSGTGSIISDKRYNDGKWKSFTMSRMKKEATITIVNMDTNE 2419
Score = 125 (49.1 bits), Expect = 0.00066, P = 0.00066
Identities = 33/135 (24%), Positives = 62/135 (45%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL---I 85
D S+D++ + Q + + +D + + + +G++ + + G G + +
Sbjct: 2964 DVSVDLEFRTAQSSAVLVGVSSQKMDGLGIELVNGKLFFHADNGVGRFTAVHEPRQEAGL 3023
Query: 86 LDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGN 145
DG+WHTV + + +L +DGQ S + + P Y+GG P L +
Sbjct: 3024 CDGQWHTVSAHKLKHRLELTVDGQKSEAASPDIRSPSADTNDPLYVGGYP---EGLKQFG 3080
Query: 146 LGLNDTFVGCLRNLK 160
L +N F GC+RN+K
Sbjct: 3081 LTINTPFKGCMRNVK 3095
>WB|WBGene00001328 [details] [associations]
symbol:epi-1 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007414 "axonal
defasciculation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010950 "positive regulation of endopeptidase activity"
evidence=IMP] [GO:0051788 "response to misfolded protein"
evidence=IMP] InterPro:IPR010307 Pfam:PF06009 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0001764 GO:GO:0002119 GO:GO:0010171 GO:GO:0040017
GO:GO:0007155 GO:GO:0009408 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0040035 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0010950
GO:GO:0005604 GO:GO:0071711 GO:GO:0040027 Pfam:PF02210
GO:GO:0051788 EMBL:Z70286 UniGene:Cel.18380 GeneID:177956
KEGG:cel:CELE_K08C7.3 CTD:177956 GeneTree:ENSGT00700000104140
NextBio:899114 GO:GO:0007414 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 EMBL:AB001074
EMBL:AB016806 PIR:T37316 RefSeq:NP_001023281.1 HSSP:Q92956
ProteinModelPortal:G5EEV6 SMR:G5EEV6 PRIDE:G5EEV6
EnsemblMetazoa:K08C7.3a.1 EnsemblMetazoa:K08C7.3a.2
WormBase:K08C7.3a OMA:CHHALLD Uniprot:G5EEV6
Length = 3704
Score = 432 (157.1 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 101/313 (32%), Positives = 173/313 (55%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G+ + SRIEY + +F+ I+ TS+ +GIIF +A K D++A+ ++ G++ +
Sbjct: 3346 GSQQYSRIEYDILPEAIDKSGEFTFKIRPTSD-NGIIF-IATNKRTDHIAVMLEHGRVVF 3403
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGESKGSSKTLNIF 126
+++ GSG + + S DK I+DG WHT++ SR+ S L +D +EG + + +
Sbjct: 3404 TYDTGSGQVIIKS-DKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESEGAANQNEDLIETQ 3462
Query: 127 GPFYLGGVPLNTSTLVRGNL--GLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTES 184
PFY+GGVP + + R NL G+ F GC+++ K N K + D G CS +E
Sbjct: 3463 PPFYVGGVPADLAGFAR-NLVVGVRSQFSGCIKDFKLNGKSL-DNGKEFGTEQCSQFSEP 3520
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKAT 244
G++F GGY + + VG L+++++PR +G+L SV +Y ++ ++GS+K T
Sbjct: 3521 GMYFGKDGGYAIVQKDYEVGLTFGLEVEMRPRMKNGILFSV-GVLEYITVEFVNGSIKTT 3579
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
V++G G + P +CDGQW + K +N+++VAV+ K L ++TD
Sbjct: 3580 VESGSGGEELWHHPDIENQYCDGQWQSFKISKKRNLLTVAVNG----KAHLKILKKAKTD 3635
Query: 305 --TNNAVFIGGHP 315
T + ++ GG P
Sbjct: 3636 VLTKDPLYFGGLP 3648
Score = 201 (75.8 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 70/262 (26%), Positives = 119/262 (45%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFS 96
T G++F+V K D++AL + DG + S + GSG + DG+WHTV
Sbjct: 2928 TFSPHGLLFFVGKDK--DFMALELSDGGVKLSVDLGSGVGQWITESSNYNDGKWHTVSIV 2985
Query: 97 RQQLSGKLKIDGQV-VAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGC 155
R++ K+ IDG+ V EG+ G +++ Y+GG P S VR + GC
Sbjct: 2986 REEKHVKIMIDGETEVLEGDVPGKDSEMSVTEFLYIGGTPSGLS--VRTTIV---PLRGC 3040
Query: 156 LRNLK--SNNKLVQDKHTSSGVIP-CSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMD 212
++++K S+N ++ H S GV C + V F + ++ +
Sbjct: 3041 IKSVKLGSDNVDLESSHASKGVRSGCPLHSVRTVSFLSDRTTASFNNATEFSEDVSVTFK 3100
Query: 213 VKPRNIS--GLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWH 270
K R+I L +V+ +D + I+ TV +G+ I+ + + P D +WH
Sbjct: 3101 FKTRSIRQPSSLFTVNDDEDSVLSVSINEDGILTVTSGED-IATLELAASP----DEKWH 3155
Query: 271 TIVAIKTKNVISV-AVDSMTTD 291
+ KTK +I + A DS + +
Sbjct: 3156 YVSIRKTKYIIRIDADDSFSNE 3177
Score = 193 (73.0 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 76/282 (26%), Positives = 127/282 (45%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSR--QQLSGKLKIDGQV- 110
DYVA ++ G+ + + G P A+ D + DG W + R + +S L V
Sbjct: 2751 DYVAAEIEYGRPKITVDLGDAP-AVVKLDTPVNDGLWRRLNIERIGKTVSVTLSKPNSVE 2809
Query: 111 VAEGESK---GSSKTLNI---FGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
AE +S G+ LN+ ++GGVP TS + +L N FVG + +LK + +
Sbjct: 2810 TAETKSSVAGGNKSVLNLNQQISRLFVGGVP--TSARISKDL-YNRDFVGDIESLKLHGE 2866
Query: 165 LV-----QDK-HTS-SGVI--P-CSDKTESGVFFYNSGGYVK-GVEQFRVGREMELKMDV 213
+ ++K +T+ +G P +D + V + GY + + ++ +
Sbjct: 2867 PIGLWNSREKGNTNVNGAQKKPKITDNADELVVSLDGEGYTSYKPSHWNPRKATKISLSF 2926
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
+ GLL V KD+ L++ DG VK +VD G G + T S Y DG+WHT+
Sbjct: 2927 LTFSPHGLLFFVGKDKDFMALELSDGGVKLSVDLGSG-VGQWITESSNYN--DGKWHTVS 2983
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
++ + + + +D T G P SE ++IGG P
Sbjct: 2984 IVREEKHVKIMIDGETEVLEGDVPGKDSEMSVTEFLYIGGTP 3025
>ZFIN|ZDB-GENE-040724-213 [details] [associations]
symbol:lama4 "laminin, alpha 4" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IGI] [GO:0030903
"notochord development" evidence=IGI] [GO:0016203 "muscle
attachment" evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-040724-213 GO:GO:0030155
GO:GO:0048514 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0030903 GO:GO:0005606 CTD:3910
HOVERGEN:HBG052299 KO:K06241 EMBL:AY862414 IPI:IPI00862172
RefSeq:NP_001034154.1 UniGene:Dr.87613 ProteinModelPortal:Q2TJF5
STRING:Q2TJF5 GeneID:566796 KEGG:dre:566796 NextBio:20888381
Uniprot:Q2TJF5
Length = 1871
Score = 425 (154.7 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 102/315 (32%), Positives = 164/315 (52%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S SR EY I K++ FS+ +KT S G+IFY+AD + +AL++ ++ +
Sbjct: 1521 GGSAHSRHEYTGIASAIKHESHFSLSLKTRSAF-GLIFYLADASGENSMALFLTHARLVF 1579
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+F+ G + + S +K DG+WH + F R G++ IDG V E + G + +L +
Sbjct: 1580 TFSSGQSQVRIRSKEKYN-DGQWHDIIFIRAGNMGRMLIDGLTVLEDRAPGRNTSLLVQD 1638
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSD-KTESGV 186
P Y+GGVP + + ++ +F GC+R+L+ N + + S GV PC + +E G
Sbjct: 1639 PLYVGGVPPHQAMKNIQRTSVS-SFTGCVRSLQLNGRSLTSASHSFGVTPCYEGPSEPGT 1697
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVH-SKKDYFILQMIDGSVKATV 245
+F GGYV + F G ++ M+V+PR SG+LL V +K+Y + + V V
Sbjct: 1698 YFAEEGGYVLLDDSFHFGSSFKMAMEVRPRVASGVLLHVFMEQKEYLTVYIYQSQVVVVV 1757
Query: 246 DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDT 305
+NG S +P+ CDG WH I I+ +V+ + VDS +G + +
Sbjct: 1758 NNGIAEFSTHVSPTQE--ICDGNWHKITVIRDGSVLQLDVDSEVNHV--VGSVSDAAQSS 1813
Query: 306 NNAVFIGGHPFLSLS 320
++ VFIGG P LS
Sbjct: 1814 SSPVFIGGAPDSMLS 1828
Score = 160 (61.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 78/299 (26%), Positives = 130/299 (43%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG--QIHYSFNCGSGPMALSSG-DKL-I 85
F I+++T + +GI+F + V ++ L +K+G ++ Y F +GP+ + + KL I
Sbjct: 1130 FDIEVRTVAN-NGILFLM--VNETNFFVLELKNGFLRLMYDFGFANGPVIIETNLAKLQI 1186
Query: 86 LDGEWHTVEFSRQQLSGK--LKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP---LNTST 140
D +H V S K L +D V ES+ K L F Y+GG P L +
Sbjct: 1187 NDARYHEVSVIYHH-SKKIILLVDRSHVKSFESE--KKPLP-FSDIYIGGAPSRILQSRP 1242
Query: 141 LVRGNLGLNDTFVGCLRNL---KSNNKLVQDKHTSSGVIPCSDKT-ESGVFFYNSGGYVK 196
+ +GL GC++ K + L++++ T C +++ S ++ GY+
Sbjct: 1243 ELTSLIGLK----GCVKGFQFQKEDFNLLEEQGTIGISSGCPEESFMSHKAYFTGNGYLS 1298
Query: 197 GVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIY 256
++ + E + K SGLL D F L + +G+V V KG
Sbjct: 1299 SSDKISPFQSFEGGLSFKTLQPSGLLFYHRDGSDEFSLSLENGAV---VLQAKGT----R 1351
Query: 257 TPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGS-SETD-TNNAVFIGG 313
S + DG+ H +VA T + +D DK P S S++D T A + GG
Sbjct: 1352 VKSQKKHYSDGRSHFLVASVTNQKYEIVIDDK--DKQDKKKPSSTSQSDNTPKAFYYGG 1408
>UNIPROTKB|F1LZ10 [details] [associations]
symbol:Lama2 "Protein Lama2" species:10116 "Rattus
norvegicus" [GO:0005604 "basement membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR010307
Pfam:PF06009 RGD:1308889 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
GO:GO:0005604 Pfam:PF02210 IPI:IPI00778460
Ensembl:ENSRNOT00000061442 ArrayExpress:F1LZ10 Uniprot:F1LZ10
Length = 1284
Score = 419 (152.6 bits), Expect = 6.3e-38, P = 6.3e-38
Identities = 98/311 (31%), Positives = 165/311 (53%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S I + KN+ ++++T +E G++FY+A + H D+ + +++G ++
Sbjct: 929 GLSRNSHIALAFDDTKVKNRLTIELEVRTEAES-GLLFYMARINHADFATVQLRNGFPYF 987
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG + + I DG+WH ++ +R + G L +D + S + L++ G
Sbjct: 988 SYDLGSGDTSTMIPTR-INDGQWHKIKITRVKQEGILSVD-DASNQTISPKKADILDVVG 1045
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSS-GVIPCSDKTESG 185
Y+GG+P+N +T G + + GC+RNL V D+ TSS V C E G
Sbjct: 1046 ILYVGGLPINYTTRRIGPVTYS--LDGCVRNLYMEQAPVDLDQPTSSFHVGTCFANAEKG 1103
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V F+VG ++ ++ + + +G+LL V S+K D ++MID +
Sbjct: 1104 TYF-DGTGFAKAVGGFKVGLDLLVEFEFRTTRPTGVLLGVSSQKMDGMGIEMIDEKLMFH 1162
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
VDNG G +A+Y P CDG+WH + A K KN + + VD D S+ D
Sbjct: 1163 VDNGAGRFTAVYDAGSPGHMCDGRWHKVTAKKIKNRLELVVDGNQVDAQSPNA-ASTSAD 1221
Query: 305 TNNAVFIGGHP 315
TN+ VF+GG P
Sbjct: 1222 TNDPVFVGGFP 1232
>UNIPROTKB|F1S2Z4 [details] [associations]
symbol:LOC100525900 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005605 "basal
lamina" evidence=IEA] Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00700000104140 EMBL:CU480638 EMBL:CU570858
EMBL:CU914700 Ensembl:ENSSSCT00000004648 OMA:ENANERN Uniprot:F1S2Z4
Length = 925
Score = 412 (150.1 bits), Expect = 1.8e-37, P = 1.8e-37
Identities = 95/311 (30%), Positives = 164/311 (52%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S I + KN+ +++T +E G++FY+A + H D+ + +++G ++
Sbjct: 570 GLSRNSHIAIAFDDTKVKNRLTIEFEVRTEAES-GLLFYMARINHADFATVQLRNGLPYF 628
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG K I DG+WH ++ R + G L +DG K + L++ G
Sbjct: 629 SYDLGSGDTNTMIPTK-INDGQWHKIKIMRIKQEGILDVDGASNRTISPK-KADILDVVG 686
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSS-GVIPCSDKTESG 185
Y+GG+P+N +T G + + GC+RN + ++ TSS V C + G
Sbjct: 687 MLYVGGLPINYTTRRIGPVTYS--IDGCIRNFQMTEAPADLERPTSSYHVGTCFAHAQKG 744
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V+ F+VG ++ ++ + + +G+LL + S+K D ++MID +
Sbjct: 745 TYF-DGTGFAKAVDGFKVGLDLLVEFEFRTTRTTGVLLGISSQKMDGMGIEMIDEKLMFH 803
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
VDNG G +A+Y P CDG+WH +VA K K+ + + VD + P S+ D
Sbjct: 804 VDNGAGWFTAVYDTGIPGHLCDGKWHKVVAKKIKHRVELTVDGNQVEAQSPNP-ASTSAD 862
Query: 305 TNNAVFIGGHP 315
TN+ VF+GG P
Sbjct: 863 TNDPVFVGGFP 873
>RGD|1308889 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina"
evidence=ISO;IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0022011 "myelination in peripheral
nervous system" evidence=IEP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEP] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:1308889 GO:GO:0007411 GO:GO:0030155 GO:GO:0043197
GO:GO:0030198 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 GO:GO:0022011 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 IPI:IPI00361301
PRIDE:F1M614 Ensembl:ENSRNOT00000014917 ArrayExpress:F1M614
Uniprot:F1M614
Length = 3085
Score = 419 (152.6 bits), Expect = 2.2e-37, P = 2.2e-37
Identities = 98/311 (31%), Positives = 165/311 (53%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S I + KN+ ++++T +E G++FY+A + H D+ + +++G ++
Sbjct: 2730 GLSRNSHIALAFDDTKVKNRLTIELEVRTEAES-GLLFYMARINHADFATVQLRNGFPYF 2788
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG + + I DG+WH ++ +R + G L +D + S + L++ G
Sbjct: 2789 SYDLGSGDTSTMIPTR-INDGQWHKIKITRVKQEGILSVD-DASNQTISPKKADILDVVG 2846
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSS-GVIPCSDKTESG 185
Y+GG+P+N +T G + + GC+RNL V D+ TSS V C E G
Sbjct: 2847 ILYVGGLPINYTTRRIGPVTYS--LDGCVRNLYMEQAPVDLDQPTSSFHVGTCFANAEKG 2904
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V F+VG ++ ++ + + +G+LL V S+K D ++MID +
Sbjct: 2905 TYF-DGTGFAKAVGGFKVGLDLLVEFEFRTTRPTGVLLGVSSQKMDGMGIEMIDEKLMFH 2963
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
VDNG G +A+Y P CDG+WH + A K KN + + VD D S+ D
Sbjct: 2964 VDNGAGRFTAVYDAGSPGHMCDGRWHKVTAKKIKNRLELVVDGNQVDAQSPNA-ASTSAD 3022
Query: 305 TNNAVFIGGHP 315
TN+ VF+GG P
Sbjct: 3023 TNDPVFVGGFP 3033
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 413 (150.4 bits), Expect = 9.7e-37, P = 9.7e-37
Identities = 97/311 (31%), Positives = 163/311 (52%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S I + KN+ ++++T +E G++FY+A + H D+ + +++G ++
Sbjct: 2767 GLSRNSHIAIAFDDTKVKNRLTIELEVRTEAES-GLLFYMARINHADFATVQLRNGLPYF 2825
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG K I DG+WH ++ R + G L +DG K + L++ G
Sbjct: 2826 SYDLGSGDTHTMIPTK-INDGQWHKIKIMRSKQEGILYVDGASNRTISPK-KADILDVVG 2883
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSS-GVIPCSDKTESG 185
Y+GG+P+N +T G + + GC+RNL ++ TSS V C + G
Sbjct: 2884 MLYVGGLPINYTTRRIGPVTYS--IDGCVRNLHMAEAPADLEQPTSSFHVGTCFANAQRG 2941
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V F+VG ++ ++ + + +G+LL + S+K D ++MID +
Sbjct: 2942 TYF-DGTGFAKAVGGFKVGLDLLVEFEFRTTTTTGVLLGISSQKMDGMGIEMIDEKLMFH 3000
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
VDNG G +A+Y P CDGQWH + A K K+ I + VD + P S+ D
Sbjct: 3001 VDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDGNQVEAQSPNP-ASTSAD 3059
Query: 305 TNNAVFIGGHP 315
TN+ VF+GG P
Sbjct: 3060 TNDPVFVGGFP 3070
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 405 (147.6 bits), Expect = 6.8e-36, P = 6.8e-36
Identities = 95/311 (30%), Positives = 162/311 (52%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S I + KN+ +++T +E G++FY+A + H D+ + +K+G ++
Sbjct: 2730 GLSRNSHIAIAFDDTKVKNRLTIEFEVRTEAES-GLLFYMARINHADFATVQLKNGLPYF 2788
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG + K I DG+WH ++ R + G + +D S + L++ G
Sbjct: 2789 SYDLGSGDTSTMIPTK-INDGQWHKIKILRVKQEGTIYVD-DASNRTISPKKADILDVVG 2846
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSSGVI-PCSDKTESG 185
Y+GG+P+N +T G + + GC+RNL ++ TSS + C + G
Sbjct: 2847 MLYVGGLPINYTTRRIGPVTYS--IDGCIRNLHMVEAPADLEQPTSSYQVGTCFANAQKG 2904
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V+ F+VG ++ ++ + + +G+LL + S+K D ++MID +
Sbjct: 2905 TYF-DGTGFAKAVDGFKVGLDLLVEFEFRTTRTTGVLLGISSQKMDGMGIEMIDEKLMFH 2963
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
VDNG G +AIY P CDGQWH + A K K+ I + VD + S+ D
Sbjct: 2964 VDNGAGRFTAIYDAGVPGHLCDGQWHKVTANKIKHRIELTVDGNQVEAQSPNR-ASTSAD 3022
Query: 305 TNNAVFIGGHP 315
TN+ VF+GG P
Sbjct: 3023 TNDPVFVGGFP 3033
Score = 111 (44.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 20/75 (26%), Positives = 44/75 (58%)
Query: 32 IDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWH 91
+++KT + D ++FY+ K +D++A+ ++ G++ + ++ GSG + D I D W+
Sbjct: 2135 VNVKT-AVADNLLFYLGSAKFVDFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDDSYWY 2193
Query: 92 TVEFSRQQLSGKLKI 106
+E SR +G + +
Sbjct: 2194 RIEASRTGRNGTISV 2208
Score = 97 (39.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 221 LLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWH--TIVAI-KT 277
+ L+ KD+ +++ DG +K + D G G S + + DG+W T+ I K
Sbjct: 2341 MYLATRDLKDFMSVELTDGHIKVSYDLGSGMASVVSNQNHN----DGKWKSFTLSRIQKQ 2396
Query: 278 KNVISVAVDSMTTDKPGLGPPGSS---ETDTNNAVFIGGHPFLSLSSKKSGP 326
N+ V +D+ + PG++ + ++ ++ GG P L S K+ P
Sbjct: 2397 ANISIVDIDTNQEENIATSSPGNNFGLDLKADDKIYFGGLPTLRNLSMKARP 2448
Score = 85 (35.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 46/204 (22%), Positives = 80/204 (39%)
Query: 130 YLGGVPL--NTSTLVRGNLGLNDTFVGCLRNLKSNNKL--VQDKHTSSGVIP-CSDKTES 184
Y GG+P N S R + + + GCL++++ + + GV CS +
Sbjct: 2432 YFGGLPTLRNLSMKARPEVNVKK-YSGCLKDIEISRTPYNILSSPDYVGVTKGCSLENVY 2490
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL------SVHSKKD-------Y 231
V F G VG E+ L K N SG++L + ++ Y
Sbjct: 2491 TVSFPKPGFVELSPVPIDVGTEINLSFSTK--NESGIILLGSGGTPIPPRRKRRQTGQVY 2548
Query: 232 FILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD 291
+ + + G ++ + G + I +P F DG+ H++ +T+ + +V VD
Sbjct: 2549 YAIFLNKGRLEVHLSTGARTMRKIVVKPEPSLFHDGREHSVHVERTRGMFTVQVDEDRKH 2608
Query: 292 KPGLGPPGSSETDTNNAVFIGGHP 315
L + E +FIGG P
Sbjct: 2609 MQNLTMEQAIEV---KKLFIGGAP 2629
>UNIPROTKB|F1N8P9 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00823129
Ensembl:ENSGALT00000023564 ArrayExpress:F1N8P9 Uniprot:F1N8P9
Length = 3060
Score = 397 (144.8 bits), Expect = 4.8e-35, P = 4.8e-35
Identities = 93/314 (29%), Positives = 165/314 (52%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G +K S + + K ++++T + G+I+Y+A IDY AL + GQ+++
Sbjct: 2702 GLAKGSHLTLLFNQTAVRKKLSVQLNLRTFASS-GLIYYMAHQNQIDYAALQLLGGQLYF 2760
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
SF+ G G A++S ++ DG+WHT+ + G + +DGQ + + G TL++ G
Sbjct: 2761 SFDLGKG-RAVASHPAIVNDGKWHTIRTEYVKRKGIIIVDGQELVSVSALGDGSTLDVEG 2819
Query: 128 PFYLGGVPLNTSTLVRGNLG-LNDTFVGCLRNLKSNNKLVQDKHTSS--GVIPCSDKTES 184
Y+GG+P++ V NLG + + C+ ++ N+K + + S V C +
Sbjct: 2820 KLYVGGLPID---YVAKNLGNVTHSIPACIGSMTINSKQLDKESPVSIFAVNKCYATVQD 2876
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKA 243
G FF SG + ++V ++ + ++ + + G+LL + S K D L++++G V
Sbjct: 2877 GTFFDGSGFAALVRDGYKVRSDVNITLEFRTTAMHGVLLGISSAKVDAIGLEIVNGKVLF 2936
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS--MTTDKPGLGPPGSS 301
V+NG G I+A Y P CDG+WH + A +K IS+ +D + TD P + S+
Sbjct: 2937 HVNNGAGRITATYEPGVANSLCDGKWHKLQANTSKYRISLIIDGNLVQTDNPYIQ---ST 2993
Query: 302 ETDTNNAVFIGGHP 315
DTNN +++GG+P
Sbjct: 2994 SADTNNPIYVGGYP 3007
Score = 225 (84.3 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 78/303 (25%), Positives = 143/303 (47%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T +G++ Y+A D+++L + DG++ + + SGP+AL++ ++ +G W+ + F
Sbjct: 2317 STFSPNGLLLYLASNGTKDFLSLELVDGKVRLTVDLCSGPLALTTENRYN-NGTWYKISF 2375
Query: 96 SRQQLSGKLKI-DG-----QVVAEGESKGSSKTLNIFG--PFYLGGVPLNTSTLVRGNLG 147
SR + G L + D + +GE+ G + LN P ++GG+P S VR G
Sbjct: 2376 SRNKKQGMLAVMDAYNLNYKETKQGEAPGVASDLNRSDKDPIFIGGLP--KSRAVRK--G 2431
Query: 148 LNDT-FVGCLRNLKSNNKLVQDKHTSSGVIP-CS-DKTESGVFFYNSGGYVKGVEQFRVG 204
LN +VGC++NL+ + S GV C + S N GY++ +E +
Sbjct: 2432 LNSRMYVGCIKNLEISRSTFDLLRNSYGVRKGCVLEPIRSMNILTN--GYIE-LEPKSLS 2488
Query: 205 REMELKMDVKPRNISGLLLS-----VHSKK------DYFILQMIDGSVKATVDNG-KGPI 252
E EL +N +G++L+ + ++ +F + +IDG + V+ G +
Sbjct: 2489 PESELMATFATKNSNGIILAGLGRGLEKRRRRQAHLPFFSIMLIDGHLAVHVNAGDRAST 2548
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG 312
+ S + DGQ H+++ I+ K +I+V VD + LG + + G
Sbjct: 2549 RKVILRSPNGTYSDGQEHSVILIRNKRIITVQVDESNPSELRLGSSAEMSPMNISNFYAG 2608
Query: 313 GHP 315
G P
Sbjct: 2609 GIP 2611
Score = 187 (70.9 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 82/315 (26%), Positives = 145/315 (46%)
Query: 26 NKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLI 85
N ++++KTT E D ++FY+ D++A+ ++ G++ ++ GSG + D I
Sbjct: 2121 NYNSLTLNVKTT-EPDNLLFYLGSNGKTDFLAVEMRRGKVALLWDLGSGSTRVEYPDFQI 2179
Query: 86 LDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR-G 144
+ +WH + +R +G L I+ K S K+ G + + +N STL+ G
Sbjct: 2180 DNNKWHRIHATRFGKTGTLTIEEM---NSNQKSSPKSATSPGTASI--LDVNKSTLMFIG 2234
Query: 145 NLG--------LNDT-FVGCLRNLKSNNK------LVQDKHTSSGVIPCSDKTESGVFFY 189
LG + T F GC+ N K ++ + SG S + E F +
Sbjct: 2235 GLGGQIKKSPAVKVTHFKGCMGEASLNGKSIGLWNYIEREGKCSGCFG-SPQDEDTSFHF 2293
Query: 190 NSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDN 247
+ GY VE+ ++ + + +GLLL + S KD+ L+++DG V+ TVD
Sbjct: 2294 DGRGY-SVVEKALRSTVTQIIIFFSTFSPNGLLLYLASNGTKDFLSLELVDGKVRLTVDL 2352
Query: 248 GKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAV-DSMTTD----KPGLGPPGSSE 302
GP++ T + Y +G W+ I + K +AV D+ + K G P +S+
Sbjct: 2353 CSGPLAL--TTENRYN--NGTWYKISFSRNKKQGMLAVMDAYNLNYKETKQGEAPGVASD 2408
Query: 303 TDTNNA--VFIGGHP 315
+ ++ +FIGG P
Sbjct: 2409 LNRSDKDPIFIGGLP 2423
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 37/141 (26%), Positives = 71/141 (50%)
Query: 24 FKNKFDFSIDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD 82
+K + D +I ++ T+ G++ ++ K +D + L + +G++ + N G+G + +
Sbjct: 2893 YKVRSDVNITLEFRTTAMHGVLLGISSAK-VDAIGLEIVNGKVLFHVNNGAGRITATYEP 2951
Query: 83 KL---ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+ + DG+WH ++ + + L IDG +V S + + P Y+GG P +
Sbjct: 2952 GVANSLCDGKWHKLQANTSKYRISLIIDGNLVQTDNPYIQSTSADTNNPIYVGGYPGD-- 3009
Query: 140 TLVRGN-LGLNDTFVGCLRNL 159
V+ N L +F GCLRNL
Sbjct: 3010 --VKQNCLTSKSSFHGCLRNL 3028
>UNIPROTKB|F1NM47 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005608 "laminin-3 complex" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
OMA:EPFYWRL GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00587004
Ensembl:ENSGALT00000036890 ArrayExpress:F1NM47 Uniprot:F1NM47
Length = 3061
Score = 397 (144.8 bits), Expect = 4.8e-35, P = 4.8e-35
Identities = 93/314 (29%), Positives = 165/314 (52%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G +K S + + K ++++T + G+I+Y+A IDY AL + GQ+++
Sbjct: 2703 GLAKGSHLTLLFNQTAVRKKLSVQLNLRTFASS-GLIYYMAHQNQIDYAALQLLGGQLYF 2761
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
SF+ G G A++S ++ DG+WHT+ + G + +DGQ + + G TL++ G
Sbjct: 2762 SFDLGKG-RAVASHPAIVNDGKWHTIRTEYVKRKGIIIVDGQELVSVSALGDGSTLDVEG 2820
Query: 128 PFYLGGVPLNTSTLVRGNLG-LNDTFVGCLRNLKSNNKLVQDKHTSS--GVIPCSDKTES 184
Y+GG+P++ V NLG + + C+ ++ N+K + + S V C +
Sbjct: 2821 KLYVGGLPID---YVAKNLGNVTHSIPACIGSMTINSKQLDKESPVSIFAVNKCYATVQD 2877
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKA 243
G FF SG + ++V ++ + ++ + + G+LL + S K D L++++G V
Sbjct: 2878 GTFFDGSGFAALVRDGYKVRSDVNITLEFRTTAMHGVLLGISSAKVDAIGLEIVNGKVLF 2937
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS--MTTDKPGLGPPGSS 301
V+NG G I+A Y P CDG+WH + A +K IS+ +D + TD P + S+
Sbjct: 2938 HVNNGAGRITATYEPGVANSLCDGKWHKLQANTSKYRISLIIDGNLVQTDNPYIQ---ST 2994
Query: 302 ETDTNNAVFIGGHP 315
DTNN +++GG+P
Sbjct: 2995 SADTNNPIYVGGYP 3008
Score = 225 (84.3 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 78/303 (25%), Positives = 143/303 (47%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T +G++ Y+A D+++L + DG++ + + SGP+AL++ ++ +G W+ + F
Sbjct: 2318 STFSPNGLLLYLASNGTKDFLSLELVDGKVRLTVDLCSGPLALTTENRYN-NGTWYKISF 2376
Query: 96 SRQQLSGKLKI-DG-----QVVAEGESKGSSKTLNIFG--PFYLGGVPLNTSTLVRGNLG 147
SR + G L + D + +GE+ G + LN P ++GG+P S VR G
Sbjct: 2377 SRNKKQGMLAVMDAYNLNYKETKQGEAPGVASDLNRSDKDPIFIGGLP--KSRAVRK--G 2432
Query: 148 LNDT-FVGCLRNLKSNNKLVQDKHTSSGVIP-CS-DKTESGVFFYNSGGYVKGVEQFRVG 204
LN +VGC++NL+ + S GV C + S N GY++ +E +
Sbjct: 2433 LNSRMYVGCIKNLEISRSTFDLLRNSYGVRKGCVLEPIRSMNILTN--GYIE-LEPKSLS 2489
Query: 205 REMELKMDVKPRNISGLLLS-----VHSKK------DYFILQMIDGSVKATVDNG-KGPI 252
E EL +N +G++L+ + ++ +F + +IDG + V+ G +
Sbjct: 2490 PESELMATFATKNSNGIILAGLGRGLEKRRRRQAHLPFFSIMLIDGHLAVHVNAGDRAST 2549
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG 312
+ S + DGQ H+++ I+ K +I+V VD + LG + + G
Sbjct: 2550 RKVILRSPNGTYSDGQEHSVILIRNKRIITVQVDESNPSELRLGSSAEMSPMNISNFYAG 2609
Query: 313 GHP 315
G P
Sbjct: 2610 GIP 2612
Score = 187 (70.9 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 82/315 (26%), Positives = 145/315 (46%)
Query: 26 NKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLI 85
N ++++KTT E D ++FY+ D++A+ ++ G++ ++ GSG + D I
Sbjct: 2122 NYNSLTLNVKTT-EPDNLLFYLGSNGKTDFLAVEMRRGKVALLWDLGSGSTRVEYPDFQI 2180
Query: 86 LDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR-G 144
+ +WH + +R +G L I+ K S K+ G + + +N STL+ G
Sbjct: 2181 DNNKWHRIHATRFGKTGTLTIEEM---NSNQKSSPKSATSPGTASI--LDVNKSTLMFIG 2235
Query: 145 NLG--------LNDT-FVGCLRNLKSNNK------LVQDKHTSSGVIPCSDKTESGVFFY 189
LG + T F GC+ N K ++ + SG S + E F +
Sbjct: 2236 GLGGQIKKSPAVKVTHFKGCMGEASLNGKSIGLWNYIEREGKCSGCFG-SPQDEDTSFHF 2294
Query: 190 NSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDN 247
+ GY VE+ ++ + + +GLLL + S KD+ L+++DG V+ TVD
Sbjct: 2295 DGRGY-SVVEKALRSTVTQIIIFFSTFSPNGLLLYLASNGTKDFLSLELVDGKVRLTVDL 2353
Query: 248 GKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAV-DSMTTD----KPGLGPPGSSE 302
GP++ T + Y +G W+ I + K +AV D+ + K G P +S+
Sbjct: 2354 CSGPLAL--TTENRYN--NGTWYKISFSRNKKQGMLAVMDAYNLNYKETKQGEAPGVASD 2409
Query: 303 TDTNNA--VFIGGHP 315
+ ++ +FIGG P
Sbjct: 2410 LNRSDKDPIFIGGLP 2424
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 37/141 (26%), Positives = 71/141 (50%)
Query: 24 FKNKFDFSIDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD 82
+K + D +I ++ T+ G++ ++ K +D + L + +G++ + N G+G + +
Sbjct: 2894 YKVRSDVNITLEFRTTAMHGVLLGISSAK-VDAIGLEIVNGKVLFHVNNGAGRITATYEP 2952
Query: 83 KL---ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+ + DG+WH ++ + + L IDG +V S + + P Y+GG P +
Sbjct: 2953 GVANSLCDGKWHKLQANTSKYRISLIIDGNLVQTDNPYIQSTSADTNNPIYVGGYPGD-- 3010
Query: 140 TLVRGN-LGLNDTFVGCLRNL 159
V+ N L +F GCLRNL
Sbjct: 3011 --VKQNCLTSKSSFHGCLRNL 3029
>MGI|MGI:99912 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IMP]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99912 GO:GO:0007411 GO:GO:0030155
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 HOGENOM:HOG000293201
HOVERGEN:HBG052298 GO:GO:0005606 eggNOG:COG0419 EMBL:U12147
EMBL:X69869 EMBL:S75315 IPI:IPI00309999 PIR:I49077
UniGene:Mm.256087 PDB:1DYK PDB:1OKQ PDB:1QU0 PDB:2WJS PDBsum:1DYK
PDBsum:1OKQ PDBsum:1QU0 PDBsum:2WJS ProteinModelPortal:Q60675
SMR:Q60675 STRING:Q60675 PhosphoSite:Q60675 PaxDb:Q60675
PRIDE:Q60675 UCSC:uc007esf.1 ChiTaRS:LAMA2 EvolutionaryTrace:Q60675
CleanEx:MM_LAMA2 Genevestigator:Q60675
GermOnline:ENSMUSG00000019899 Uniprot:Q60675
Length = 3106
Score = 393 (143.4 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 100/313 (31%), Positives = 164/313 (52%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S I + KN+ ++++T +E G++FY+ + H D+ + +++G +
Sbjct: 2763 GLSRNSHIAIVFDDTKVKNRLTIELEVRTEAES-GLLFYMGRINHADFGTVQLRNGFPFF 2821
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG K I DG+WH ++ R + G L +D ++ S + L++ G
Sbjct: 2822 SYDLGSGSTRTMIPTK-INDGQWHKIKIVRVKQEGILYVD-DASSQTISPKKADILDVGG 2879
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSS-GVIPCSDKTESG 185
Y+GG+P+N +T G + + GC+RNL V D+ TSS V C ESG
Sbjct: 2880 ILYVGGLPINYTTRRIGPVTYS--LDGCVRNLHMEQAPVDLDQPTSSFHVGTCFANAESG 2937
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V F VG ++ ++ + + +G+LL + S+K D ++MID +
Sbjct: 2938 TYF-DGTGFGKAVGGFIVGLDLLVEFEFRTTRPTGVLLGISSQKMDGMGIEMIDEKLMFH 2996
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET- 303
VDNG G +AIY P C+GQW+ + A K KN + + VD D P S+ T
Sbjct: 2997 VDNGAGRFTAIYDAEIPGHMCNGQWYKVTAKKIKNRLELVVDGNQVDAQS---PNSASTS 3053
Query: 304 -DTNNAVFIGGHP 315
DTN+ VF+GG P
Sbjct: 3054 ADTNDPVFVGGFP 3066
Score = 107 (42.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 32 IDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWH 91
+ +KT + D ++FY+ K ID++A+ ++ G++ + + GSG + D I D W+
Sbjct: 2168 VHVKT-AVADNLLFYLGSAKFIDFLAIEMRKGKVSFLWIVGSGVGRVGFPDLTIDDSYWY 2226
Query: 92 TVEFSRQQLSGKLKI 106
+E SR +G + +
Sbjct: 2227 RIEASRTGRNGSISV 2241
Score = 100 (40.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 46/192 (23%), Positives = 78/192 (40%)
Query: 151 TFVGCLRNLKSNNKLV-----QDKHTSSGVIPCSDKTES--GVFFYNSGGYVKGVEQFRV 203
TF GC+ +NK + ++K S + E G ++ GY R
Sbjct: 2294 TFTGCMGETYFDNKPIGLWNFREKEGDCKGCTVSPQVEDSEGTIQFDGEGYALVSRPIRW 2353
Query: 204 GREMELKM-DVKPRNISGLL--LSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSD 260
+ M + + S LL L+ KD+ +++ DG VK + D G G S + +
Sbjct: 2354 YPNISTVMFKFRTFSSSALLMYLATRDLKDFMSVELSDGHVKVSYDLGSGMTSVVSNQNH 2413
Query: 261 PYFFCDGQWH--TIVAI-KTKNVISVAVDSMTTDKPGLGPPGSS---ETDTNNAVFIGGH 314
DG+W T+ I K N+ V +DS + G++ + ++ ++ GG
Sbjct: 2414 N----DGKWKAFTLSRIQKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGL 2469
Query: 315 PFLSLSSKKSGP 326
P L S K+ P
Sbjct: 2470 PTLRNLSMKARP 2481
Score = 89 (36.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 43/204 (21%), Positives = 82/204 (40%)
Query: 130 YLGGVPL--NTSTLVRGNLGLNDTFVGCLRNLKSNNKL--VQDKHTSSGVIP-CSDKTES 184
Y GG+P N S R + + + GCL++++ + + GV CS + +
Sbjct: 2465 YFGGLPTLRNLSMKARPEVNVKK-YSGCLKDIEISRTPYNILSSPDYVGVTKGCSLENVN 2523
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-------------SVHSKKDY 231
V F G VG E+ L RN SG++L + + Y
Sbjct: 2524 TVSFPKPGFVELAAVSIDVGTEINLSFST--RNESGIILLGSGGTLTPPRRKRRQTTQAY 2581
Query: 232 FILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD 291
+ + + G ++ + +G + I +P F DG+ H++ +T+ + +V +D D
Sbjct: 2582 YAIFLNKGRLEVHLSSGTRTMRKIVIKPEPNLFHDGREHSVHVERTRGIFTVQIDE---D 2638
Query: 292 KPGLGPPGSSETDTNNAVFIGGHP 315
+ + + +F+GG P
Sbjct: 2639 RRHIQNLTEEQPIEVKKLFVGGAP 2662
>UNIPROTKB|E2RPP1 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 CTD:3909 KO:K06240 OMA:DSCQGCS EMBL:AAEX03005452
RefSeq:XP_537297.2 Ensembl:ENSCAFT00000028869 GeneID:480173
KEGG:cfa:480173 Uniprot:E2RPP1
Length = 3337
Score = 391 (142.7 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 97/311 (31%), Positives = 158/311 (50%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S +S +++ K + F++D++T S + G++FY K+ Y+ALY+ G++ +
Sbjct: 2994 GDSPTSHLQFTIPQELVKPRSRFAVDVQTASSR-GLVFYTG-TKN-SYMALYLSKGRLIF 3050
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G + L S +K DG+WHTV F + G L +DG EG G+S T ++
Sbjct: 3051 ALGAGGKKLRLKSKEKCN-DGKWHTVVFGQDDKKGHLIVDGLRAREGSLPGNS-TFSLTA 3108
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGV 186
P YLG P + N +FVGCLRN + + K + S GV PC E G+
Sbjct: 3109 PVYLGSSPAEKPKSLPQN-----SFVGCLRNFQLDLKPLDTPSASVGVSPCLGGSLEKGI 3163
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKD-YFILQMIDGSVKATV 245
+F GG+V +G E +L ++PR+++G+L+ V S+ Y + M G V A+V
Sbjct: 3164 YFSQEGGHVILANSVLLGPEFKLVFSIRPRSLTGILMHVGSQPGRYLCVYMEAGKVTASV 3223
Query: 246 DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGP-PGSSETD 304
D+ G I TP CDG+WH++ ++++ + +DS + G P P +S
Sbjct: 3224 DSEAGGILTSITPKRS--LCDGRWHSVTVTIKQHIVHLELDSENSYTTGRLPFPSAS--- 3278
Query: 305 TNNAVFIGGHP 315
T + +GG P
Sbjct: 3279 TQEPIHVGGIP 3289
Score = 151 (58.2 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 59/265 (22%), Positives = 116/265 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+F + I+TT ++ G++F+ + +++L ++DG++ + S P ++ DG
Sbjct: 2624 NFGLTIQTTVDR-GLLFFAENQDR--FISLNIEDGKLLVQYKLNSEPPKEREIGHIVNDG 2680
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGL 148
+ H + + ++ I V+ S+ + F +YLGG+P+ S R N+
Sbjct: 2681 KDHRILIVIGKFQNRISI---AVSSQNSQIDGDIFD-FSTYYLGGIPI--SIRERFNIS- 2733
Query: 149 NDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSD--KTESGVFFYNSGGY-VKGVEQFRVGR 205
F GC++NLK +V+ T CS+ K F G G++ +
Sbjct: 2734 TPAFRGCMKNLKKTTGVVRLNDTVGVTKKCSEDWKLVRSASFSRDGQLRFTGLD-LPLPS 2792
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKA-TVDNGKGPISAIYTPSDPYFF 264
E + + SG+L ++ S+K + + DG ++ T +N S I P +
Sbjct: 2793 EFQASFGFQTFQPSGILFNLQSQKHSLQVTLEDGRIELNTREN-----SLIIR--SPQTY 2845
Query: 265 CDGQWHTIVAIKTKNVISVAVDSMT 289
DG+ H + I + + + +D T
Sbjct: 2846 MDGELHYVSVIGDNSGLRLLIDDQT 2870
>UNIPROTKB|F1PEZ5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AAEX03000448
EMBL:AAEX03000449 EMBL:AAEX03000450 EMBL:AAEX03000451
EMBL:AAEX03000452 EMBL:AAEX03000453 Ensembl:ENSCAFT00000036090
Uniprot:F1PEZ5
Length = 3085
Score = 390 (142.3 bits), Expect = 2.7e-34, P = 2.7e-34
Identities = 92/311 (29%), Positives = 159/311 (51%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S + + KN+ +++T + G++FY+A + H D+ + ++ G ++
Sbjct: 2730 GLSRNSHVAIAFDDTKVKNRLTIEFEVRTEAAS-GLLFYMARINHADFATVQLRHGLPYF 2788
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG K I DG+WH ++ R + G L +D S + L++ G
Sbjct: 2789 SYDLGSGDTNTMIPTK-INDGQWHKIKIMRIKQEGILYVD-DASNRTTSPKKADILDVVG 2846
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSS-GVIPCSDKTESG 185
Y+GG+P+N +T G + + GC+RN + ++ TSS V C + + G
Sbjct: 2847 MLYVGGLPINYTTRRIGPVTYS--IEGCIRNFQMAEAPADLEQPTSSFHVGTCFARAQRG 2904
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V F+VG ++ ++ + + +G+LL + S+K D ++MID +
Sbjct: 2905 TYF-DGTGFAKAVGGFKVGLDLLVEFEFRTTRTTGVLLGISSQKMDGMGIEMIDEKLMFH 2963
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
VDNG G +A+Y P CDGQWH + A K K+ I + VD + S+ D
Sbjct: 2964 VDNGAGRFTAVYDAGIPGHLCDGQWHKVTANKIKHRIELTVDGKQVEAQSPNQ-ASTSAD 3022
Query: 305 TNNAVFIGGHP 315
TN+ VF+GG P
Sbjct: 3023 TNDPVFVGGFP 3033
Score = 112 (44.5 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 21/75 (28%), Positives = 44/75 (58%)
Query: 32 IDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWH 91
+++KT + D ++FY+ K ID++A+ ++ G++ + ++ GSG + D I D W+
Sbjct: 2135 VNVKT-AVADNLLFYLGSAKFIDFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDDSYWY 2193
Query: 92 TVEFSRQQLSGKLKI 106
+E SR +G + +
Sbjct: 2194 RIEASRTGRNGTISV 2208
Score = 83 (34.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 46/205 (22%), Positives = 83/205 (40%)
Query: 130 YLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV-----QDKHTSSGVIPCSDKTES 184
++GG+ T L + + TF GC+ ++K + ++K S + E
Sbjct: 2243 FVGGL---TGKLKKADAVRVITFTGCMGETYFDSKPIGLWNFREKEGDCKGCTVSPQVED 2299
Query: 185 --GVFFYNSGGYVKGVEQFRVGREMELKM-DVKPRNISGLL--LSVHSKKDYFILQMIDG 239
G ++ GY R + M + + S LL L+ KD+ +++ DG
Sbjct: 2300 SEGTIQFDGEGYALVSRPIRWYPNISTVMFKFRTFSSSALLMYLATRDLKDFMSVELTDG 2359
Query: 240 SVKATVDNGKGPISAIYTPSDPYFFCDGQWH--TIVAIKTKNVISVAVDSMTTDKPGLGP 297
VK + D G G S + + DG+W T+ I+ + IS+ VD T + +
Sbjct: 2360 HVKVSYDLGSGMASVVSNQNHN----DGKWKSFTLSRIQKQANISI-VDINTNQEENIAT 2414
Query: 298 PGSS-----ETDTNNAVFIGGHPFL 317
S + ++ ++ GG P L
Sbjct: 2415 SSSGNNFGLDLKADDKIYFGGLPTL 2439
Score = 79 (32.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 48/204 (23%), Positives = 77/204 (37%)
Query: 130 YLGGVPL--NTSTLVRGNLGLNDTFVGCLRNLKSNNKL--VQDKHTSSGVIP-CSDKTES 184
Y GG+P N R + L + GCL++++ + + GV CS +
Sbjct: 2432 YFGGLPTLRNLRLFNRPEVNLK-RYSGCLKDIEISRTPYNILSSPDYVGVTKGCSLENVY 2490
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL--------SVHSKKD-----Y 231
V F G VG E+ L K N SG++L K+ Y
Sbjct: 2491 TVSFPKPGFVELPPVPIDVGTEINLSFSTK--NESGIILLGSGGMPAQPRRKRRQTGQAY 2548
Query: 232 FILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD 291
+ + + G ++ + G + I P F DG+ H++ +TK V +V VD
Sbjct: 2549 YAVFLSKGRLEVHLSTGTRTMRKIVIRPGPSGFHDGREHSVHVERTKGVFTVQVDEDGRH 2608
Query: 292 KPGLGPPGSSETDTNNAVFIGGHP 315
L P + +F+GG P
Sbjct: 2609 TQAL--PAEQAIQVHR-LFVGGAP 2629
>UNIPROTKB|F1PVY5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:AAEX03000448 EMBL:AAEX03000449 EMBL:AAEX03000450
EMBL:AAEX03000451 EMBL:AAEX03000452 EMBL:AAEX03000453
Ensembl:ENSCAFT00000001697 Uniprot:F1PVY5
Length = 3109
Score = 390 (142.3 bits), Expect = 2.7e-34, P = 2.7e-34
Identities = 92/311 (29%), Positives = 159/311 (51%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S + + KN+ +++T + G++FY+A + H D+ + ++ G ++
Sbjct: 2754 GLSRNSHVAIAFDDTKVKNRLTIEFEVRTEAAS-GLLFYMARINHADFATVQLRHGLPYF 2812
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S++ GSG K I DG+WH ++ R + G L +D S + L++ G
Sbjct: 2813 SYDLGSGDTNTMIPTK-INDGQWHKIKIMRIKQEGILYVD-DASNRTTSPKKADILDVVG 2870
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSS-GVIPCSDKTESG 185
Y+GG+P+N +T G + + GC+RN + ++ TSS V C + + G
Sbjct: 2871 MLYVGGLPINYTTRRIGPVTYS--IEGCIRNFQMAEAPADLEQPTSSFHVGTCFARAQRG 2928
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F + G+ K V F+VG ++ ++ + + +G+LL + S+K D ++MID +
Sbjct: 2929 TYF-DGTGFAKAVGGFKVGLDLLVEFEFRTTRTTGVLLGISSQKMDGMGIEMIDEKLMFH 2987
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
VDNG G +A+Y P CDGQWH + A K K+ I + VD + S+ D
Sbjct: 2988 VDNGAGRFTAVYDAGIPGHLCDGQWHKVTANKIKHRIELTVDGKQVEAQSPNQ-ASTSAD 3046
Query: 305 TNNAVFIGGHP 315
TN+ VF+GG P
Sbjct: 3047 TNDPVFVGGFP 3057
Score = 112 (44.5 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 21/75 (28%), Positives = 44/75 (58%)
Query: 32 IDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWH 91
+++KT + D ++FY+ K ID++A+ ++ G++ + ++ GSG + D I D W+
Sbjct: 2159 VNVKT-AVADNLLFYLGSAKFIDFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDDSYWY 2217
Query: 92 TVEFSRQQLSGKLKI 106
+E SR +G + +
Sbjct: 2218 RIEASRTGRNGTISV 2232
Score = 92 (37.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 52/222 (23%), Positives = 90/222 (40%)
Query: 130 YLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV-----QDKHTSSGVIPCSDKTES 184
++GG+ T L + + TF GC+ ++K + ++K S + E
Sbjct: 2267 FVGGL---TGKLKKADAVRVITFTGCMGETYFDSKPIGLWNFREKEGDCKGCTVSPQVED 2323
Query: 185 --GVFFYNSGGYVKGVEQFRVGREMELKM-DVKPRNISGLL--LSVHSKKDYFILQMIDG 239
G ++ GY R + M + + S LL L+ KD+ +++ DG
Sbjct: 2324 SEGTIQFDGEGYALVSRPIRWYPNISTVMFKFRTFSSSALLMYLATRDLKDFMSVELTDG 2383
Query: 240 SVKATVDNGKGPISAIYTPSDPYFFCDGQWH--TIVAIKTKNVISVAVDSMTTDKPGLGP 297
VK + D G G S + + DG+W T+ I+ + IS+ VD T + +
Sbjct: 2384 HVKVSYDLGSGMASVVSNQNHN----DGKWKSFTLSRIQKQANISI-VDINTNQEENIAT 2438
Query: 298 PGSS-----ETDTNNAVFIGGHPFLSLSSKKSGPRT--KRRS 332
S + ++ ++ GG P L S K+ P KR S
Sbjct: 2439 SSSGNNFGLDLKADDKIYFGGLPTLRNLSMKARPEVNLKRYS 2480
Score = 85 (35.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 49/204 (24%), Positives = 78/204 (38%)
Query: 130 YLGGVPL--NTSTLVRGNLGLNDTFVGCLRNLKSNNKL--VQDKHTSSGVIP-CSDKTES 184
Y GG+P N S R + L + GCL++++ + + GV CS +
Sbjct: 2456 YFGGLPTLRNLSMKARPEVNLK-RYSGCLKDIEISRTPYNILSSPDYVGVTKGCSLENVY 2514
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL--------SVHSKKD-----Y 231
V F G VG E+ L K N SG++L K+ Y
Sbjct: 2515 TVSFPKPGFVELPPVPIDVGTEINLSFSTK--NESGIILLGSGGMPAQPRRKRRQTGQAY 2572
Query: 232 FILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD 291
+ + + G ++ + G + I P F DG+ H++ +TK V +V VD
Sbjct: 2573 YAVFLSKGRLEVHLSTGTRTMRKIVIRPGPSGFHDGREHSVHVERTKGVFTVQVDEDGRH 2632
Query: 292 KPGLGPPGSSETDTNNAVFIGGHP 315
L P + +F+GG P
Sbjct: 2633 TQAL--PAEQAIQVHR-LFVGGAP 2653
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 386 (140.9 bits), Expect = 7.1e-34, P = 7.1e-34
Identities = 93/314 (29%), Positives = 164/314 (52%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S + P + + + I+T + G+I+YVA +DY L +++G++H+
Sbjct: 2726 GLSQNSHLVLPLNQSDVRKRLQVQLSIRTFASS-GLIYYVAHQNQMDYATLQLQEGRLHF 2784
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
F+ G G +S L+ DG+WHTV+ + + +DGQ G++ TL++
Sbjct: 2785 MFDLGKGRTKVSH-PALLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGNATTLDVER 2843
Query: 128 PFYLGGVPLNTSTLVRGNLG-LNDTFVGCLRNLKSNNK-LVQDKHTSSGVIP-CSDKTES 184
YLGG+P S N+G + + C+ + N + L +D+ S+ + C +
Sbjct: 2844 KLYLGGLP---SHYRARNIGTITHSIPACIGEIMVNGQQLDKDRPLSASAVDRCYVVAQE 2900
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKA 243
G FF SG E ++V ++ + ++ + + +G+LL + S K D L+++DG V
Sbjct: 2901 GTFFEGSGYAALVKEGYKVRLDLNITLEFRTTSKNGVLLGISSAKVDAIGLEIVDGKVLF 2960
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD--SMTTDKPGLGPPGSS 301
V+NG G I+A Y P CDG+WHT+ A K+K+ I + VD S+ + P S+
Sbjct: 2961 HVNNGAGRITATYQPRAARALCDGKWHTLQAHKSKHRIVLTVDGNSVRAESPHTH---ST 3017
Query: 302 ETDTNNAVFIGGHP 315
DTN+ +++GG+P
Sbjct: 3018 SADTNDPIYVGGYP 3031
Score = 251 (93.4 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 86/323 (26%), Positives = 156/323 (48%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T +G++FY+A D++++ + G++ + GSGP+ L + D+ +G W+ + F
Sbjct: 2342 STFSPNGLLFYLASNGTKDFLSIELVRGRVKVMVDLGSGPLTLMT-DRRYNNGTWYKIAF 2400
Query: 96 SRQQLSGKLKI-DG-----QVVAEGESKGSSKTLNIFGP--FYLGGVPLNTSTLVRGNLG 147
R + G L + D + +GE+ G++ LN Y+GG+P S VR +
Sbjct: 2401 QRNRKQGLLAVFDAYDTSDKETKQGETPGAASDLNRLEKDLIYVGGLP--HSKAVRKGVS 2458
Query: 148 LNDTFVGCLRNLKSNNKLVQDKHTSSGVIP-CSDKTESGVFFYNSGGYVKGVEQFRVGRE 206
+ ++VGC++NL+ + S GV C+ + V F GGYV+ + + E
Sbjct: 2459 -SRSYVGCIKNLEISRSTFDLLRNSYGVRKGCALEPIQSVSFLR-GGYVE-MPPKSLSPE 2515
Query: 207 MELKMDVKPRNISGLLLSVHSKK-----------DYFILQMIDGSVKATVDNGKGPI--- 252
L +N SG+LL K +F + +++G ++ V++G G
Sbjct: 2516 SSLLATFATKNSSGILLVALGKDAEEAGGAQAHVPFFSIMLLEGRIEVHVNSGDGTSLRK 2575
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFI 311
+ ++ P+ Y DGQ H+I ++ + VI++ VD + + LGP +T D +N ++I
Sbjct: 2576 ALLHAPTGSY--SDGQEHSISLVRNRRVITIQVDENSPVEMKLGPLTEGKTIDISN-LYI 2632
Query: 312 GGHPFLSLSSKKSGPRTKRRSVF 334
GG P K+ P K R+ F
Sbjct: 2633 GGLP-----EDKATPMLKMRTSF 2650
Score = 183 (69.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 73/308 (23%), Positives = 144/308 (46%)
Query: 32 IDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWH 91
+++KT E D ++FY+ D++A+ ++ G++ + ++ GSG L + I + WH
Sbjct: 2152 LNVKT-QEPDNLLFYLGSSSSSDFLAVEMRRGKVAFLWDLGSGSTRLEFPEVSINNNRWH 2210
Query: 92 TVEFSRQQLSGKLKIDGQVVAEG------ESKGSSKTLNIFGP--FYLGGVPLNTSTLVR 143
++ +R G L + AE +S G SK L+I ++GG+ ++
Sbjct: 2211 SIYITRFGNMGSLSVKEASAAENPPVRTSKSPGPSKVLDINNSTLMFVGGL----GGQIK 2266
Query: 144 GNLGLNDT-FVGCLRNLKSNNK------LVQDKHTSSGVIPCSDKTESGVFFYNSGGYVK 196
+ + T F GC+ N K ++ + +G S +S F ++ GY
Sbjct: 2267 KSPAVKVTHFKGCMGEAFLNGKSIGLWNYIEREGKCNGCFGSSQNEDSS-FHFDGSGYAM 2325
Query: 197 GVEQFRVGREMELKMDVKPRNISGLL--LSVHSKKDYFILQMIDGSVKATVDNGKGPISA 254
VE+ ++ + + +GLL L+ + KD+ ++++ G VK VD G GP++
Sbjct: 2326 -VEKTLRPTVTQIVILFSTFSPNGLLFYLASNGTKDFLSIELVRGRVKVMVDLGSGPLTL 2384
Query: 255 IYTPSDPYFFCDGQWHTIVAIKTKNVISVAV-DSM-TTDKP---GLGPPGSSETDT--NN 307
+ +D + +G W+ I + + +AV D+ T+DK G P +S+ + +
Sbjct: 2385 M---TDRRYN-NGTWYKIAFQRNRKQGLLAVFDAYDTSDKETKQGETPGAASDLNRLEKD 2440
Query: 308 AVFIGGHP 315
+++GG P
Sbjct: 2441 LIYVGGLP 2448
Score = 152 (58.6 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 44/167 (26%), Positives = 82/167 (49%)
Query: 24 FKNKFDFSIDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS--- 79
+K + D +I ++ T+ ++G++ ++ K +D + L + DG++ + N G+G + +
Sbjct: 2917 YKVRLDLNITLEFRTTSKNGVLLGISSAK-VDAIGLEIVDGKVLFHVNNGAGRITATYQP 2975
Query: 80 SGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+ + DG+WHT++ + + L +DG V S + + P Y+GG P +
Sbjct: 2976 RAARALCDGKWHTLQAHKSKHRIVLTVDGNSVRAESPHTHSTSADTNDPIYVGGYPAH-- 3033
Query: 140 TLVRGN-LGLNDTFVGCLRNLK-SNNKLVQDKHTS-----SGVIPCS 179
++ N L +F GC+RNL+ S VQ S GV P S
Sbjct: 3034 --IKQNCLSSRASFRGCVRNLRLSRGSQVQSLDLSRAFDLQGVFPHS 3078
>UNIPROTKB|P25391 [details] [associations]
symbol:LAMA1 "Laminin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IDA;IPI] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0030155
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005911
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 DrugBank:DB00015 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 EMBL:AP002409 EMBL:AP005062 EMBL:AP005210 EMBL:X58531
IPI:IPI00375294 PIR:S14458 RefSeq:NP_005550.2 UniGene:Hs.270364
ProteinModelPortal:P25391 SMR:P25391 DIP:DIP-29324N
MINT:MINT-6740485 STRING:P25391 PhosphoSite:P25391 PaxDb:P25391
PRIDE:P25391 Ensembl:ENST00000389658 GeneID:284217 KEGG:hsa:284217
UCSC:uc002knm.3 CTD:284217 GeneCards:GC18M006941 H-InvDB:HIX0014316
HGNC:HGNC:6481 HPA:CAB010179 MIM:150320 neXtProt:NX_P25391
PharmGKB:PA30270 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 InParanoid:P25391 KO:K05637 OMA:EPFYWRL
OrthoDB:EOG4K3KVB ChiTaRS:LAMA1 GenomeRNAi:284217 NextBio:94628
ArrayExpress:P25391 Bgee:P25391 CleanEx:HS_LAMA1
Genevestigator:P25391 GermOnline:ENSG00000101680 GO:GO:0005606
GO:GO:0005608 Uniprot:P25391
Length = 3075
Score = 384 (140.2 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 92/313 (29%), Positives = 158/313 (50%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G +++S P + K + I+T + G+I+Y+A DY L + G++H+
Sbjct: 2717 GLTQNSHFILPFNQSAVRKKLSVELSIRTFASS-GLIYYMAHQNQADYAVLQLHGGRLHF 2775
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
F+ G G +S L+ DG+WHTV+ + G + +DG+ G L++ G
Sbjct: 2776 MFDLGKGRTKVSH-PALLSDGKWHTVKTDYVKRKGFITVDGRESPMVTVVGDGTMLDVEG 2834
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK-LVQDKHTSSGVIP-CSDKTESG 185
FYLGG+P GN+ + C+ ++ N+K L +D S+ + C + G
Sbjct: 2835 LFYLGGLPSQYQARKIGNI--THSIPACIGDVTVNSKQLDKDSPVSAFTVNRCYAVAQEG 2892
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
+F SG E ++V ++ + ++ + + +G+LL + + K D L+++DG V
Sbjct: 2893 TYFDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDAIGLELVDGKVLFH 2952
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET- 303
V+NG G I+A Y P CDG+WHT+ A K+K+ I++ VD G P + T
Sbjct: 2953 VNNGAGRITAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDGNAV---GAESPHTQSTS 3009
Query: 304 -DTNNAVFIGGHP 315
DTNN +++GG+P
Sbjct: 3010 VDTNNPIYVGGYP 3022
Score = 186 (70.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 80/310 (25%), Positives = 136/310 (43%)
Query: 31 SIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEW 90
++++KT E D ++FY+ D++A+ ++ G++ + ++ GSG L D I D W
Sbjct: 2143 TLNVKT-QEPDNLLFYLGSSTASDFLAVEMRRGRVAFLWDLGSGSTRLEFPDFPIDDNRW 2201
Query: 91 HTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR-GNLG-- 147
H++ +R G L V E S S T P + +N STL+ G LG
Sbjct: 2202 HSIHVARFGNIGSLS-----VKEMSSNQKSPTKTSKSPGTANVLDVNNSTLMFVGGLGGQ 2256
Query: 148 ------LNDT-FVGCLRNLKSNNK------LVQDKHTSSGVIPCSDKTESGVFFYNSGGY 194
+ T F GCL N K ++ + G S + E F ++ GY
Sbjct: 2257 IKKSPAVKVTHFKGCLGEAFLNGKSIGLWNYIEREGKCRGCFG-SSQNEDPSFHFDGSGY 2315
Query: 195 VKGVEQFRVGREMELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPI 252
VE+ ++ M + +GLLL + S KD+ +++ G VK D G GPI
Sbjct: 2316 -SVVEKSLPATVTQIIMLFNTFSPNGLLLYLGSYGTKDFLSIELFRGRVKVMTDLGSGPI 2374
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKT-KNVISVAVDSMTTD----KPGLGPPGSSETDT-- 305
+ + +D + +G W+ I + K + +D+ T K G P SS+ +
Sbjct: 2375 TLL---TDRRYN-NGTWYKIAFQRNRKQGVLAVIDAYNTSNKETKQGETPGASSDLNRLD 2430
Query: 306 NNAVFIGGHP 315
+ +++GG P
Sbjct: 2431 KDPIYVGGLP 2440
Score = 176 (67.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 72/300 (24%), Positives = 134/300 (44%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTV-EF 95
T +G++ Y+ D++++ + G++ + GSGP+ L + + + +
Sbjct: 2335 TFSPNGLLLYLGSYGTKDFLSIELFRGRVKVMTDLGSGPITLLTDRRYNNGTWYKIAFQR 2394
Query: 96 SRQQ----LSGKLKIDGQVVAEGESKGSSKTLNIFG--PFYLGGVPLNTSTLVRGNLGLN 149
+R+Q + + +GE+ G+S LN P Y+GG+P S +VR +
Sbjct: 2395 NRKQGVLAVIDAYNTSNKETKQGETPGASSDLNRLDKDPIYVGGLP--RSRVVRRGV-TT 2451
Query: 150 DTFVGCLRNLKSNNKLVQDKHTSSGVIP-CSDKTESGVFFYNSGGYVKGVEQFRVGREME 208
+FVGC++NL+ + S GV C + V F GGY++ + + E E
Sbjct: 2452 KSFVGCIKNLEISRSTFDLLRNSYGVRKGCLLEPIRSVSFLK-GGYIE-LPPKSLSPESE 2509
Query: 209 LKMDVKPRNISGLLLS-----VHSKKD-------YFILQMIDGSVKATVDNGKGPISAIY 256
+ N SG++L+ V + D +F + +I G+++ V+ G G
Sbjct: 2510 WLVTFATTNSSGIILAALGGDVEKRGDREEAHVPFFSVMLIGGNIEVHVNPGDGTGLRKA 2569
Query: 257 TPSDPYFFC-DGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
P C DGQ H+I ++ + +I+V +D + LG S T + +++GG P
Sbjct: 2570 LLHAPTGTCSDGQAHSISLVRNRRIITVQLDENNPVEMKLGTLVESRTINVSNLYVGGIP 2629
>UNIPROTKB|F1MEG3 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007166 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GO:GO:0002011 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0061304 OMA:EPFYWRL
GO:GO:0005606 GO:GO:0005608 EMBL:DAAA02056788 EMBL:DAAA02056789
EMBL:DAAA02056790 EMBL:DAAA02056791 EMBL:DAAA02056792
IPI:IPI01000434 Ensembl:ENSBTAT00000024169 Uniprot:F1MEG3
Length = 3031
Score = 383 (139.9 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 94/314 (29%), Positives = 164/314 (52%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G ++ S + P + + + I+T + G++FY+A +D+ AL + G++H+
Sbjct: 2673 GLAEGSHLVLPFNQLAVRKRLSVQLRIRTFASS-GLVFYMAHQNQVDHAALQLHAGRLHF 2731
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+F+ G G +S L+ DG+WHTV+ + G + +DGQ + G + TL++ G
Sbjct: 2732 TFDLGKGRTKVSH-PALLSDGQWHTVKTEYFKRRGFMTVDGQESPVVTTVGDATTLDVEG 2790
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK-LVQDKHTSS-GVIPCSDKTESG 185
YLGG+P GN+ + CL + N++ L D S+ V C + G
Sbjct: 2791 KLYLGGLPSEYRARNTGNI--THSVPACLGEVTVNSQQLHMDIPMSAFAVTRCYAVAQEG 2848
Query: 186 VFFYNSGGYVKGV-EQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKA 243
FF SG Y V E +RV ++ + ++ + + +G+LL + S K D L+++DG +
Sbjct: 2849 TFFEGSG-YAALVREGYRVRSDVNITLEFRTSSENGVLLGISSAKVDAIGLEIVDGKLLF 2907
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS--MTTDKPGLGPPGSS 301
V+NG G I+A Y P P CDG+WHT+ A K+K+ + + VD + + P S+
Sbjct: 2908 HVNNGAGRITATYEPKTPSRLCDGRWHTLQANKSKHRVVLTVDGNVVRAESPHTQ---ST 2964
Query: 302 ETDTNNAVFIGGHP 315
DT++ +++GG+P
Sbjct: 2965 SADTSDPIYVGGYP 2978
Score = 275 (101.9 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 90/322 (27%), Positives = 159/322 (49%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T +G++ Y+A D++++ + DG++ + + GSGP+AL + D+ +G W+ + F
Sbjct: 2289 STYSPNGLLLYLASNGTKDFLSIDLVDGRVRVTVDLGSGPLALIT-DRRYNNGTWYKIAF 2347
Query: 96 SRQQLSGKLK-IDG-----QVVAEGESKGSSKTLNIFG--PFYLGGVPLNTSTLVRGNLG 147
R + G L ID + +GE+ G+S LN P Y+GG+P S +VR +
Sbjct: 2348 QRNKKQGLLAVIDAYNTTYKETKQGETPGASSDLNRLDKDPIYVGGLP--RSRVVRKGVS 2405
Query: 148 LNDTFVGCLRNLKSNNKLVQDKHTSSGVIP-CSDKTESGVFFYNSGGYVKGVEQFRVGRE 206
+ ++VGC++NL+ + S GV C + V F GGYV+ + + +
Sbjct: 2406 -SKSYVGCIKNLEISRSTFDLLRNSYGVRKGCILEPVRSVSFLR-GGYVE-LPPKSLSPD 2462
Query: 207 MELKMDVKPRNISGLLLSVHSKKD-----------YFILQMIDGSVKATVDNGKGPI--- 252
EL R+ SG++L+ S+ ++ + +I+G V+ V+ G G
Sbjct: 2463 TELLATFATRSSSGIVLAALSQSSEKPGDRQAHGPFWSIMLIEGHVEVHVNPGDGTSLRR 2522
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG 312
+ ++ P+ Y DGQ H+I I++ V++V VD T + LGP S T +++++G
Sbjct: 2523 ALLHAPTGTYG--DGQEHSISMIRSGRVVTVQVDETTPVEMKLGPSAESRTINVSSLYVG 2580
Query: 313 GHPFLSLSSKKSGPRTKRRSVF 334
G P + P K RS F
Sbjct: 2581 GIP-----EGEGTPMLKMRSSF 2597
Score = 199 (75.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 78/314 (24%), Positives = 145/314 (46%)
Query: 26 NKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLI 85
N ++++KT SE D ++FY+ D++A+ ++ G++ + ++ GSG L D I
Sbjct: 2093 NYNSLTLNVKT-SEPDNLLFYLGSSTSADFLAVEMRRGKVAFLWDLGSGSTRLEFPDFPI 2151
Query: 86 LDGEWHTVEFSRQQLSGKLKIDGQVVAE------GESKGSSKTLNIFGP--FYLGGVPLN 137
D +WH + +R G L + A+ +S G++K L++ ++GG+
Sbjct: 2152 DDNKWHGIYVTRFGNIGSLSVKEMSAAQKPPPRTSKSPGTAKVLDVNNSTMMFVGGL--- 2208
Query: 138 TSTLVRGNLGLNDT-FVGCLRNLKSNNK------LVQDKHTSSGVIPCSDKTESGVFFYN 190
++ + + T F GC+ N + ++ + G S + E F +
Sbjct: 2209 -GGQIKKSPAVKVTHFKGCMGEAFLNGQSIGLWNYIEREGECHGCFG-SPQDEDASFHFA 2266
Query: 191 SGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDNG 248
GY VE+ ++ M + +GLLL + S KD+ + ++DG V+ TVD G
Sbjct: 2267 GSGY-SVVEKTLRATVTQIIMLFSTYSPNGLLLYLASNGTKDFLSIDLVDGRVRVTVDLG 2325
Query: 249 KGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAV-DSMTTD----KPGLGPPGSSET 303
GP++ I +D + +G W+ I + K +AV D+ T K G P SS+
Sbjct: 2326 SGPLALI---TDRRYN-NGTWYKIAFQRNKKQGLLAVIDAYNTTYKETKQGETPGASSDL 2381
Query: 304 DT--NNAVFIGGHP 315
+ + +++GG P
Sbjct: 2382 NRLDKDPIYVGGLP 2395
>ZFIN|ZDB-GENE-030131-9823 [details] [associations]
symbol:lama5 "laminin, alpha 5" species:7955
"Danio rerio" [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0033333 "fin development" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0035141 "medial fin morphogenesis"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0033334
"fin morphogenesis" evidence=IMP] InterPro:IPR000742
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
PROSITE:PS50026 ZFIN:ZDB-GENE-030131-9823 GO:GO:0008104
GO:GO:0030155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016337 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
eggNOG:COG0419 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OrthoDB:EOG4VHK5G GO:GO:0035138 EMBL:DQ232730 IPI:IPI00734953
RefSeq:NP_001034260.1 UniGene:Dr.12091 ProteinModelPortal:Q2Q1W5
STRING:Q2Q1W5 PRIDE:Q2Q1W5 GeneID:321243 KEGG:dre:321243
NextBio:20807298 ArrayExpress:Q2Q1W5 Bgee:Q2Q1W5 GO:GO:0035141
Uniprot:Q2Q1W5
Length = 3664
Score = 377 (137.8 bits), Expect = 7.8e-33, P = 7.8e-33
Identities = 98/308 (31%), Positives = 153/308 (49%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S S + + ++ F FSI ++ S G+IF+VA K +AL V DG +
Sbjct: 3323 STHSHMRFDSLPQAFSKAPHFSISVRVNSSS-GLIFHVAGGKGQRMMALSVSDGHLTLLV 3381
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
N G ++ S K DG WHTV + G L +DG K++ P
Sbjct: 3382 NGGKRKTSIRS-KKRYSDGLWHTVFVKVEGDRGSLTVDGIDTQNKRVSAGGKSM-FAAPL 3439
Query: 130 YLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKT-ESGVFF 188
Y+GG+P++ S + G FVGC+R+LK N +Q S GV PC + + G F
Sbjct: 3440 YIGGLPVDHSAAMAG-------FVGCVRDLKLNEVSLQSPSVSVGVTPCYQQPLQPGAHF 3492
Query: 189 YNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMID-GSVKATVDN 247
+ GG++ E +G+++E++++V+ + SGLLL +KK + + ++ G V +++
Sbjct: 3493 SSRGGFMTIDESLVLGQDLEIQLEVRLDSGSGLLLHTGAKKTHQLSVYLEQGQVTVLMNS 3552
Query: 248 GKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNN 307
G G S TP + CDG WHTI +K NVI + VDS + + G+ P S
Sbjct: 3553 GSGEFSFSLTPKES--LCDGGWHTIAIVKKSNVIQLHVDSFS--EHGVAPKQSRSNGGKE 3608
Query: 308 AVFIGGHP 315
AV++GG P
Sbjct: 3609 AVYLGGLP 3616
>RGD|1307207 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10116 "Rattus
norvegicus" [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005606 "laminin-1 complex"
evidence=IEA;ISO] [GO:0005608 "laminin-3 complex" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005911
"cell-cell junction" evidence=IEA;ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009888 "tissue development" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0043208 "glycosphingolipid binding"
evidence=IEA;ISO] [GO:0043256 "laminin complex" evidence=ISO]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=IEA;ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA;ISO]
[GO:0060445 "branching involved in salivary gland morphogenesis"
evidence=IEA;ISO] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA;ISO] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 RGD:1307207 GO:GO:0005615 GO:GO:0030155
GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0031175 GO:GO:0060441 GO:GO:0060445 Pfam:PF02210
GO:GO:0045198 GO:GO:0045995 GO:GO:0005201 GO:GO:0043208
GO:GO:0002011 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
GO:GO:0005608 EMBL:AB425340 IPI:IPI00363534 RefSeq:NP_001101707.2
UniGene:Rn.2807 Ensembl:ENSRNOT00000023226 GeneID:316758
KEGG:rno:316758 UCSC:RGD:1307207 NextBio:671215 Uniprot:D4A409
Length = 3083
Score = 372 (136.0 bits), Expect = 2.2e-32, P = 2.2e-32
Identities = 88/313 (28%), Positives = 165/313 (52%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S++S + P + + ++I+T + G+I+YVA +DY L + +G++++
Sbjct: 2725 GLSQNSHLVLPFNQSDVRKRLQVQLNIRTFASS-GLIYYVAHQNQMDYAVLQLHEGRLNF 2783
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
F+ G G +S L+ DG+WHTV+ + + +DGQ G++ TL++
Sbjct: 2784 MFDLGKGRTKVSH-PALLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGNATTLDVER 2842
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK-LVQDKHTSSGVIP-CSDKTESG 185
YLGG+P + G + + C+ ++ N++ L +D+ S+ + C + G
Sbjct: 2843 KLYLGGLPAHYRARSIGTI--THSIPACIGDVTVNSQQLDKDRPASAFAVDRCYAVAQEG 2900
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
FF SG E ++V ++ + ++ + + +G+LL + S K D L+++DG V
Sbjct: 2901 TFFEGSGYAALVKEGYKVRLDLNITLEFRTSSKNGVLLGISSAKVDAIGLEIVDGKVSFH 2960
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKN--VISVAVDSMTTDKPGLGPPGSSE 302
V+NG G I+A Y P CDG+WHT+ A K+++ V++V D++ + P S+
Sbjct: 2961 VNNGAGRITATYKPRATRTLCDGKWHTLHAHKSRHRIVLTVDGDAVRAESPHTH---STS 3017
Query: 303 TDTNNAVFIGGHP 315
DTN+ +++GG+P
Sbjct: 3018 ADTNDPIYVGGYP 3030
Score = 239 (89.2 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 77/303 (25%), Positives = 147/303 (48%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T +G++FY+A D++++ + G++ + GSGP+ L + D+ +G W+ + F
Sbjct: 2341 STFSPNGLLFYLASNGTKDFLSIELLRGRVKVMVDLGSGPLTLMT-DRRYNNGTWYKIAF 2399
Query: 96 SRQQLSGKLKI-DG-----QVVAEGESKGSSKTLNIFGP--FYLGGVPLNTSTLVRGNLG 147
R + G L + D + +GE+ G++ LN Y+GG+P S VR +
Sbjct: 2400 QRNRKQGLLAVFDAYDTSDKETKQGETPGAASDLNRLEKDLIYVGGLP--HSKAVRKGVS 2457
Query: 148 LNDTFVGCLRNLKSNNKLVQDKHTSSGVIP-CSDKTESGVFFYNSGGYVKGVEQFRVGRE 206
+ ++VGC++NL+ + S GV C+ + V F GGY++ + + E
Sbjct: 2458 -SRSYVGCIKNLEISRSTFDLLRNSYGVRKGCTLEPIQSVSFLK-GGYME-MPPKSLSPE 2514
Query: 207 MELKMDVKPRNISGLLLSVHSKK-----------DYFILQMIDGSVKATVDNGKGPI--- 252
L +N SG++L+ K +F + +I+G ++ +++G G
Sbjct: 2515 SSLLATFATKNSSGVILAALGKDAEKAGASQAHVPFFSILLIEGRIEVHINSGDGTSLRK 2574
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIG 312
+ ++ P+ Y DGQ H+I ++ + VI+V +D + + LGP T + ++IG
Sbjct: 2575 ALLHAPTGSY--SDGQEHSISVVRNRRVITVQLDENSPVEMKLGPLTEGRTINISNLYIG 2632
Query: 313 GHP 315
G P
Sbjct: 2633 GLP 2635
Score = 177 (67.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 76/309 (24%), Positives = 140/309 (45%)
Query: 32 IDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWH 91
+++KT E D ++FY+ D++A+ ++ G+ + ++ GSG L D I + +WH
Sbjct: 2151 LNVKT-QEPDNLLFYLGSSSSSDFLAVEMRRGKAAFLWDLGSGSTRLEFPDVSINNDKWH 2209
Query: 92 TVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR-GNLG--- 147
++ +R G L + AE +SK+ P + +N STL+ G LG
Sbjct: 2210 SIYITRFGNMGSLSVKEASAAEDPPVRTSKS-----PGLANVLDINNSTLMFVGGLGGQI 2264
Query: 148 -----LNDT-FVGCLRNLKSNNK------LVQDKHTSSGVIPCSDKTESGVFFYNSGGYV 195
+ T F GC+ N K ++ + +G S + E F ++ GY
Sbjct: 2265 KKSPAVKVTHFKGCMGEAFLNGKSIGLWNYIEREGKCNGCFG-SSQNEDASFHFDGSGYA 2323
Query: 196 KGVEQFR--VGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPIS 253
+ R V + + L P + L S + KD+ ++++ G VK VD G GP++
Sbjct: 2324 VVEKALRPTVTQIIILFSTFSPNGLLFYLAS-NGTKDFLSIELLRGRVKVMVDLGSGPLT 2382
Query: 254 AIYTPSDPYFFCDGQWHTIVAIKTKNVISVAV-DSM-TTDKP---GLGPPGSSETDT--N 306
+ +D + +G W+ I + + +AV D+ T+DK G P +S+ +
Sbjct: 2383 LM---TDRRYN-NGTWYKIAFQRNRKQGLLAVFDAYDTSDKETKQGETPGAASDLNRLEK 2438
Query: 307 NAVFIGGHP 315
+ +++GG P
Sbjct: 2439 DLIYVGGLP 2447
Score = 157 (60.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 41/150 (27%), Positives = 76/150 (50%)
Query: 24 FKNKFDFSIDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS--- 79
+K + D +I ++ TS ++G++ ++ K +D + L + DG++ + N G+G + +
Sbjct: 2916 YKVRLDLNITLEFRTSSKNGVLLGISSAK-VDAIGLEIVDGKVSFHVNNGAGRITATYKP 2974
Query: 80 SGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
+ + DG+WHT+ + + L +DG V S + + P Y+GG P +
Sbjct: 2975 RATRTLCDGKWHTLHAHKSRHRIVLTVDGDAVRAESPHTHSTSADTNDPIYVGGYPAH-- 3032
Query: 140 TLVRGN-LGLNDTFVGCLRNLK-SNNKLVQ 167
V+ N L +F GC+RNL+ S VQ
Sbjct: 3033 --VKQNCLSSRASFRGCVRNLELSRGSQVQ 3060
>UNIPROTKB|F1NZZ2 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IEA] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007229 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0090002 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:LRHTTGP GO:GO:0043259 EMBL:AADN02019242
EMBL:AADN02019240 EMBL:AADN02019241 IPI:IPI00578246
Ensembl:ENSGALT00000008535 Uniprot:F1NZZ2
Length = 3668
Score = 372 (136.0 bits), Expect = 2.7e-32, P = 2.7e-32
Identities = 102/312 (32%), Positives = 158/312 (50%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S SSR E+ I F + FS++++ S +G++FYVA + +AL+V +G+ +
Sbjct: 3317 GGSPSSRWEFEEIPASFSQRSHFSLEVRLNSS-NGLLFYVAGERGTS-MALFVSNGRFIF 3374
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G + + S +K D WHTV FSR Q +L IDG + A+ + +++
Sbjct: 3375 LVDIGGRRLRIRSKEKYH-DRRWHTVFFSRDQSRAQLVIDG-LRAQSAAVATAELFVAQT 3432
Query: 128 PFYLGGVPLNTSTLVRGNLGLN-DTFVGCLRNLKSNNK-LVQDKHTSSGVIPCSDKT-ES 184
P Y+GGVP + LG + +F GCLRN + + K L HT GV PC + ES
Sbjct: 3433 PLYVGGVPDGRAKAHM--LGTSVSSFDGCLRNPQLDGKPLGTPSHTF-GVTPCYEGALES 3489
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDY--FILQMIDGSVK 242
GVFF GG + + +++E+ ++V+P + SGL+ + +++ + +L M + V
Sbjct: 3490 GVFFAADGGSITLADALATEQDLEVTLEVRPHSASGLIFHIGTRRSHHSLVLYMEETKVT 3549
Query: 243 ATVDNGKGPISAIYT-PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS 301
+ G S T PS CDGQWHTI A K KN+I V VD T +GP
Sbjct: 3550 MRANTGADEFSTSVTCPS----LCDGQWHTITATKRKNIIQVEVD--TERNYAVGPSWPP 3603
Query: 302 ETDTNNAVFIGG 313
++GG
Sbjct: 3604 APSARAMFYLGG 3615
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 365 (133.5 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 91/313 (29%), Positives = 155/313 (49%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G + S P + + + I+T + G+I+Y+A +DY L + G +H+
Sbjct: 2676 GLMQGSHFVLPFNQLAVRKRLSVQLSIRTFASS-GLIYYMAHQNQVDYATLQLHGGYLHF 2734
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
F+ G G +S I DG+WHTV+ + G + +DGQ + G L++ G
Sbjct: 2735 MFDLGKGRTKVSHPAP-ISDGKWHTVKTEHFKRKGFMTVDGQESPTVITVGDGTMLDVEG 2793
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK-LVQDKHTSS-GVIPCSDKTESG 185
YLGG+P GN+ + C+ + N K L +D S+ V C + G
Sbjct: 2794 KLYLGGLPSEYKARNIGNI--THSVPACIGEVTVNGKQLDKDSPVSAFAVTRCYAVAQEG 2851
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKAT 244
FF SG E ++VG ++ + ++ + + +G+LL + S K D L++++G +
Sbjct: 2852 TFFEGSGYAALVKEGYKVGSDVNITLEFRTTSENGVLLGISSAKVDAIGLEIVNGKILFH 2911
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKN--VISVAVDSMTTDKPGLGPPGSSE 302
V+NG G I+AIY P CDG+WHT+ A K+K+ V+ V D++ + P S+
Sbjct: 2912 VNNGAGRITAIYKPKAITTLCDGKWHTLQAQKSKHRLVLIVDGDAVRAESPHTQ---STS 2968
Query: 303 TDTNNAVFIGGHP 315
DT + +++GG+P
Sbjct: 2969 ADTIDPIYVGGYP 2981
Score = 186 (70.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 78/310 (25%), Positives = 141/310 (45%)
Query: 31 SIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEW 90
++++KT SE D ++FY+ D++A+ ++ G++ + ++ GSG L D I D W
Sbjct: 2097 TLNVKT-SEPDNLLFYLGSSTSADFMAVEMRRGKVAFLWDMGSGSTRLEFPDFPIDDNRW 2155
Query: 91 HTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR-GNLG-- 147
H++ +R G L + E +SK+ P + +N STL+ G LG
Sbjct: 2156 HSIYVTRFGNIGSLSVKEMSAIEKPPMKTSKS-----PGAANVLDINNSTLMFVGGLGGQ 2210
Query: 148 ------LNDT-FVGCLRNLKSNNK------LVQDKHTSSGVIPCSDKTESGVFFYNSGGY 194
+ T F GC+ N + ++ + G S + E F ++ GY
Sbjct: 2211 IKKSPAVKVTHFKGCMGEAFLNGQSIGLWNYIEREGRCHGCFG-SPQNEDSSFHFDGSGY 2269
Query: 195 VKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDNGKGPI 252
+ RV ++ M + +GLLL + S KD+ ++++ G V+ VD G GP+
Sbjct: 2270 SVVEKTLRV-TVTQIIMLFSTFSPNGLLLYLASNGTKDFLSIELVRGRVRVVVDLGSGPL 2328
Query: 253 SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAV-DSMTTD----KPGLGPPGSSETDT-- 305
+ I +D + +G W+ I + + +AV D+ T K G P SS+ +
Sbjct: 2329 ALI---TDRRYN-NGTWYKIAFQRNRKQGFLAVIDAYNTSYKETKQGETPGASSDLNRLD 2384
Query: 306 NNAVFIGGHP 315
+ +++GG P
Sbjct: 2385 KDPIYVGGLP 2394
Score = 182 (69.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 64/224 (28%), Positives = 106/224 (47%)
Query: 113 EGESKGSSKTLNIFG--PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKH 170
+GE+ G+S LN P Y+GG+P S +VR + + ++VGC++NL+ +
Sbjct: 2370 QGETPGASSDLNRLDKDPIYVGGLP--RSRIVRKGV-TSKSYVGCIKNLEISRSTFDLLR 2426
Query: 171 TSSGVIP-CSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSV---H 226
S GV C + V F GGY++ + + E EL +N SG++L+ H
Sbjct: 2427 HSYGVRKGCILEPIRSVSFLK-GGYIE-LSPKSLSPESELLATFATKNSSGIILAALGRH 2484
Query: 227 SKKD------------YFILQMIDGSVKATVDNGKGPI---SAIYTPSDPYFFCDGQWHT 271
+K +F + +IDG V+ V++G G + + P Y DGQ H+
Sbjct: 2485 GEKQGHLQAHGQPSQPFFSIMLIDGHVEVHVNSGDGTSLRRALLRAPKGTY--SDGQEHS 2542
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
I I+T+ VI+V +D + L P S + +++GG P
Sbjct: 2543 ISLIRTRRVITVQMDETNPVEMKLVPSAESRAINVSNLYVGGIP 2586
>UNIPROTKB|F1MDD5 [details] [associations]
symbol:Bt.12589 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:DAAA02056591
EMBL:DAAA02056592 EMBL:DAAA02056593 EMBL:DAAA02056594
EMBL:DAAA02056595 EMBL:DAAA02056596 EMBL:DAAA02056597
EMBL:DAAA02056598 EMBL:DAAA02056599 EMBL:DAAA02056600
EMBL:DAAA02056601 EMBL:DAAA02056602 IPI:IPI00686590
Ensembl:ENSBTAT00000060991 ArrayExpress:F1MDD5 Uniprot:F1MDD5
Length = 3242
Score = 365 (133.5 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 88/311 (28%), Positives = 157/311 (50%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S +S + + K++ F++D+ TT+ + G++FY ++ALY+ G++ +
Sbjct: 2899 GDSPTSHLLFMLPQELLKSRSQFAVDVLTTASR-GLVFYTGT--RSSFMALYLSKGRLVF 2955
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ + L S +K DG+WHTV F + G+L +DG EG G+S T+++
Sbjct: 2956 ALGAEGKKLKLKSKEKCN-DGKWHTVTFGQDGGKGRLVVDGLRTREGHLPGNS-TISLRA 3013
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGV 186
P YLG P + N +FVGCLRN + + K ++ S GV PC E G+
Sbjct: 3014 PVYLGSAPSGKPKSLPQN-----SFVGCLRNFQLDLKPLETPSASFGVSPCLGSSLEKGI 3068
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKATV 245
+F GG++ +G E +L ++PR+++G+L+ + S+ + + M G V A+V
Sbjct: 3069 YFSQEGGHIILANSVSLGPEFKLVFSIRPRSLTGILIHIGSQPGQHLCVYMEGGKVTASV 3128
Query: 246 DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGP-PGSSETD 304
+ G + TP CDGQWH++ ++++ + +D+ + G P P + +
Sbjct: 3129 GSEAGEVLTSVTPKQA--LCDGQWHSVAVTIKQHILHLKLDAEDSYTAGRHPFPPARPLE 3186
Query: 305 TNNAVFIGGHP 315
++IGG P
Sbjct: 3187 R---LYIGGVP 3194
Score = 157 (60.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 60/260 (23%), Positives = 112/260 (43%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
F I+TT ++ G++F+ + H +++L V+DG++ + S P +I DG+
Sbjct: 2529 FGQTIQTTVDR-GLLFFAENQDH--FISLNVEDGRLMVRYKLNSEPPKEKGIRDIINDGK 2585
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLN 149
H V+ ++ ++ I+ + +S + F +YLGG+P+ S R N+
Sbjct: 2586 DHLVQIKIGKVQQRMWINVDI----QSVKIEDDIFDFSTYYLGGIPI--SIRERFNIS-T 2638
Query: 150 DTFVGCLRNLKSNNKLVQDKHTSSGVIPCSD--KTESGVFFYNSGGYVKGVE-QFRVGRE 206
F GC++NLK +V+ T CS+ K F + GG + F
Sbjct: 2639 PAFRGCMKNLKKTTGVVRLNDTVGVTKKCSEDWKLVRSASF-SRGGQLSFTNLDFPSSSH 2697
Query: 207 MELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCD 266
+ + SG+LLS + + DG ++ + + PI +T P + D
Sbjct: 2698 FQASFGFQTFQPSGILLSHQMGASSLQVTLEDGHIELSTRDSSSPI---FT--SPQTYMD 2752
Query: 267 GQWHTIVAIKTKNVISVAVD 286
G H + I + + + +D
Sbjct: 2753 GLLHYVSVISDNSGLWLLID 2772
>UNIPROTKB|Q6VU69 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 UniGene:Hs.436367 DNASU:3909
GeneID:3909 KEGG:hsa:3909 CTD:3909 HGNC:HGNC:6483 PharmGKB:PA30272
KO:K06240 ChiTaRS:LAMA3 GenomeRNAi:3909 NextBio:15345
HOVERGEN:HBG100777 EMBL:AY327114 IPI:IPI00895830
RefSeq:NP_001121190.1 ProteinModelPortal:Q6VU69 STRING:Q6VU69
PRIDE:Q6VU69 Ensembl:ENST00000587184 UCSC:uc002kut.4
ArrayExpress:Q6VU69 Bgee:Q6VU69 Uniprot:Q6VU69
Length = 1668
Score = 359 (131.4 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 87/294 (29%), Positives = 155/294 (52%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84
K + F++D++TTS + G++F+ K+ ++ALY+ G++ ++ + + S +K
Sbjct: 1342 KPRSQFAVDMQTTSSR-GLVFHTG-TKN-SFMALYLSKGRLVFALGTDGKKLRIKSKEKC 1398
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
DG+WHTV F G+L +DG EG G+S T++I P YLG P +
Sbjct: 1399 N-DGKWHTVVFGHDGEKGRLVVDGLRAREGSLPGNS-TISIRAPVYLGSPPSGKPKSLPT 1456
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGVFFYNSGGYVKGVEQFRV 203
N +FVGCL+N + ++K + +S GV C E G++F GG+V +
Sbjct: 1457 N-----SFVGCLKNFQLDSKPLYTPSSSFGVSSCLGGPLEKGIYFSEEGGHVVLAHSVLL 1511
Query: 204 GREMELKMDVKPRNISGLLLSVHSKKDYFILQMID-GSVKATVDNGKGPISAIYTPSDPY 262
G E +L ++PR+++G+L+ + S+ + ++ G V A++D+G G S TP
Sbjct: 1512 GPEFKLVFSIRPRSLTGILIHIGSQPGKHLCVYLEAGKVTASMDSGAGGTSTSVTPKQS- 1570
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGP-PGSSETDTNNAVFIGGHP 315
CDGQWH++ ++++ + +D+ ++ G P P +S T + +GG P
Sbjct: 1571 -LCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPAS---TQEPLHLGGAP 1620
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 60/265 (22%), Positives = 119/265 (44%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSG-PMALSSGDKLILDG 88
F I+TT ++ G++F+ + +++L ++DG++ + S P GD I +G
Sbjct: 957 FGQTIQTTVDR-GLLFFAENGDR--FISLNIEDGKLMVRYKLNSELPKERGVGDA-INNG 1012
Query: 89 EWHTVEFSRQQLSGKL--KIDGQ-VVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGN 145
H+++ +L ++ +D Q + +GE + F +YLGG+P+ + R N
Sbjct: 1013 RDHSIQIKIGKLQKRMWINVDVQNTIIDGE-------VFDFSTYYLGGIPI--AIRERFN 1063
Query: 146 LGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSD--KTESGVFFYNSGGYVKGVEQFRV 203
+ F GC++NLK + +V+ T CS+ K F + GG + +
Sbjct: 1064 IS-TPAFRGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRSASF-SRGGQLSFTDLGLP 1121
Query: 204 GRE-MELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVK-ATVDNGKGPISAIYTPSDP 261
+ ++ + SG+LL + + + DG ++ +T D+G S I+ P
Sbjct: 1122 PTDHLQASFGFQTFQPSGILLDHQTWTRNLQVTLEDGYIELSTSDSG----SPIF--KSP 1175
Query: 262 YFFCDGQWHTIVAIKTKNVISVAVD 286
+ DG H + I + + + +D
Sbjct: 1176 QTYMDGLLHYVSVISDNSGLRLLID 1200
>UNIPROTKB|B0YJ33 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 IPI:IPI00790908 RefSeq:NP_000218.2
UniGene:Hs.436367 DNASU:3909 GeneID:3909 KEGG:hsa:3909 CTD:3909
HGNC:HGNC:6483 PharmGKB:PA30272 KO:K06240 ChiTaRS:LAMA3
GenomeRNAi:3909 NextBio:15345 HOGENOM:HOG000048708 EMBL:EF444992
STRING:B0YJ33 Ensembl:ENST00000269217 UCSC:uc002kus.4
HOVERGEN:HBG100777 Uniprot:B0YJ33
Length = 1724
Score = 359 (131.4 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 87/294 (29%), Positives = 155/294 (52%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84
K + F++D++TTS + G++F+ K+ ++ALY+ G++ ++ + + S +K
Sbjct: 1398 KPRSQFAVDMQTTSSR-GLVFHTG-TKN-SFMALYLSKGRLVFALGTDGKKLRIKSKEKC 1454
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
DG+WHTV F G+L +DG EG G+S T++I P YLG P +
Sbjct: 1455 N-DGKWHTVVFGHDGEKGRLVVDGLRAREGSLPGNS-TISIRAPVYLGSPPSGKPKSLPT 1512
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGVFFYNSGGYVKGVEQFRV 203
N +FVGCL+N + ++K + +S GV C E G++F GG+V +
Sbjct: 1513 N-----SFVGCLKNFQLDSKPLYTPSSSFGVSSCLGGPLEKGIYFSEEGGHVVLAHSVLL 1567
Query: 204 GREMELKMDVKPRNISGLLLSVHSKKDYFILQMID-GSVKATVDNGKGPISAIYTPSDPY 262
G E +L ++PR+++G+L+ + S+ + ++ G V A++D+G G S TP
Sbjct: 1568 GPEFKLVFSIRPRSLTGILIHIGSQPGKHLCVYLEAGKVTASMDSGAGGTSTSVTPKQS- 1626
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGP-PGSSETDTNNAVFIGGHP 315
CDGQWH++ ++++ + +D+ ++ G P P +S T + +GG P
Sbjct: 1627 -LCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPAS---TQEPLHLGGAP 1676
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
Identities = 60/265 (22%), Positives = 119/265 (44%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSG-PMALSSGDKLILDG 88
F I+TT ++ G++F+ + +++L ++DG++ + S P GD I +G
Sbjct: 1013 FGQTIQTTVDR-GLLFFAENGDR--FISLNIEDGKLMVRYKLNSELPKERGVGDA-INNG 1068
Query: 89 EWHTVEFSRQQLSGKL--KIDGQ-VVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGN 145
H+++ +L ++ +D Q + +GE + F +YLGG+P+ + R N
Sbjct: 1069 RDHSIQIKIGKLQKRMWINVDVQNTIIDGE-------VFDFSTYYLGGIPI--AIRERFN 1119
Query: 146 LGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSD--KTESGVFFYNSGGYVKGVEQFRV 203
+ F GC++NLK + +V+ T CS+ K F + GG + +
Sbjct: 1120 IS-TPAFRGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRSASF-SRGGQLSFTDLGLP 1177
Query: 204 GRE-MELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVK-ATVDNGKGPISAIYTPSDP 261
+ ++ + SG+LL + + + DG ++ +T D+G S I+ P
Sbjct: 1178 PTDHLQASFGFQTFQPSGILLDHQTWTRNLQVTLEDGYIELSTSDSG----SPIF--KSP 1231
Query: 262 YFFCDGQWHTIVAIKTKNVISVAVD 286
+ DG H + I + + + +D
Sbjct: 1232 QTYMDGLLHYVSVISDNSGLRLLID 1256
>UNIPROTKB|I3LV27 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 EMBL:CU993814
Ensembl:ENSSSCT00000024191 Uniprot:I3LV27
Length = 1668
Score = 358 (131.1 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 88/293 (30%), Positives = 149/293 (50%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84
K + F++D++TTS + G++FY ++ALY+ G++ ++ + L S ++
Sbjct: 1343 KPRSQFAVDVQTTSSR-GLVFYTGT--KTSFMALYLSKGRLVFALGAEGKKLKLKSKERC 1399
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
DG+WHTV F G+L +DG EG G+S T+++ P YLG P S +
Sbjct: 1400 N-DGKWHTVVFGHDGERGRLVMDGLRAREGSLPGNS-TISLRAPVYLGASPSGKSKSLPQ 1457
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGVFFYNSGGYVKGVEQFRV 203
N +FVGCLRN + + K ++ S GV PC E G++F GG+V +
Sbjct: 1458 N-----SFVGCLRNFQLDLKPLETPSASLGVSPCLGGSLEKGIYFSQEGGHVILANSVFL 1512
Query: 204 GREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKATVDNGKGPISAIYTPSDPY 262
G E +L ++PR+++G+L+ + S+ ++ + + G V A+V + G I TP
Sbjct: 1513 GPEFKLVFSIRPRSLTGILIHIGSQPGEHLCVYLEAGKVTASVSSEAGGILTSVTPKQS- 1571
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
CDGQWH++ ++++ + +DS + G P S T + IG P
Sbjct: 1572 -LCDGQWHSVAVTIKQHIVHLELDSEHSYTAGRHP--FSPARTKEHLHIGDVP 1621
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 67/297 (22%), Positives = 133/297 (44%)
Query: 26 NKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLI 85
N F F+ I+TT + G++F+ A+ + +++L ++ G++ + SGP ++
Sbjct: 954 NPF-FTQIIQTTVDS-GLLFF-AENQDC-FMSLNIEGGRLMVRYKVDSGPPKEKEIGAIV 1009
Query: 86 LDGEWH--TVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR 143
DG+ H +V SR Q ++++D EG++ F +YLGG+P+ S R
Sbjct: 1010 NDGKDHLISVRISRLQKRMRIRMDSLSSIEGDAFD-------FSTYYLGGIPI--SIRER 1060
Query: 144 GNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSD--KTESGVFFYNSGGYVKGVE-Q 200
N+ F GC++NL+ + +V+ T CS+ K F + GG +
Sbjct: 1061 FNIS-TPAFRGCMKNLRKTSGVVRLNDTVGVTKRCSEDWKLVRSASF-SRGGQLSFTNLD 1118
Query: 201 FRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSD 260
+ + + SG+LL+ ++ + + DG ++ + + GPI +
Sbjct: 1119 WPSPSHFQASFGFQTFQPSGILLNHQTRSSSLQVTLEDGHIELSTRDSSGPIL-----TS 1173
Query: 261 PYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSE-TDTNNAVFIGGHPF 316
P + DG H + I + + + +D D+P + +D+ ++ +GG F
Sbjct: 1174 PQTYMDGLLHYVSVISDNSGLRLLID----DQPLKNNQKLRDFSDSQQSLRLGGSQF 1226
>UNIPROTKB|F1SBB3 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 EMBL:CU993814 Ensembl:ENSSSCT00000004108 OMA:RAANQSS
Uniprot:F1SBB3
Length = 1724
Score = 358 (131.1 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 88/293 (30%), Positives = 149/293 (50%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84
K + F++D++TTS + G++FY ++ALY+ G++ ++ + L S ++
Sbjct: 1399 KPRSQFAVDVQTTSSR-GLVFYTGT--KTSFMALYLSKGRLVFALGAEGKKLKLKSKERC 1455
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
DG+WHTV F G+L +DG EG G+S T+++ P YLG P S +
Sbjct: 1456 N-DGKWHTVVFGHDGERGRLVMDGLRAREGSLPGNS-TISLRAPVYLGASPSGKSKSLPQ 1513
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGVFFYNSGGYVKGVEQFRV 203
N +FVGCLRN + + K ++ S GV PC E G++F GG+V +
Sbjct: 1514 N-----SFVGCLRNFQLDLKPLETPSASLGVSPCLGGSLEKGIYFSQEGGHVILANSVFL 1568
Query: 204 GREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKATVDNGKGPISAIYTPSDPY 262
G E +L ++PR+++G+L+ + S+ ++ + + G V A+V + G I TP
Sbjct: 1569 GPEFKLVFSIRPRSLTGILIHIGSQPGEHLCVYLEAGKVTASVSSEAGGILTSVTPKQS- 1627
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
CDGQWH++ ++++ + +DS + G P S T + IG P
Sbjct: 1628 -LCDGQWHSVAVTIKQHIVHLELDSEHSYTAGRHP--FSPARTKEHLHIGDVP 1677
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 67/297 (22%), Positives = 133/297 (44%)
Query: 26 NKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLI 85
N F F+ I+TT + G++F+ A+ + +++L ++ G++ + SGP ++
Sbjct: 1010 NPF-FTQIIQTTVDS-GLLFF-AENQDC-FMSLNIEGGRLMVRYKVDSGPPKEKEIGAIV 1065
Query: 86 LDGEWH--TVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR 143
DG+ H +V SR Q ++++D EG++ F +YLGG+P+ S R
Sbjct: 1066 NDGKDHLISVRISRLQKRMRIRMDSLSSIEGDAFD-------FSTYYLGGIPI--SIRER 1116
Query: 144 GNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSD--KTESGVFFYNSGGYVKGVE-Q 200
N+ F GC++NL+ + +V+ T CS+ K F + GG +
Sbjct: 1117 FNIS-TPAFRGCMKNLRKTSGVVRLNDTVGVTKRCSEDWKLVRSASF-SRGGQLSFTNLD 1174
Query: 201 FRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSD 260
+ + + SG+LL+ ++ + + DG ++ + + GPI +
Sbjct: 1175 WPSPSHFQASFGFQTFQPSGILLNHQTRSSSLQVTLEDGHIELSTRDSSGPIL-----TS 1229
Query: 261 PYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSE-TDTNNAVFIGGHPF 316
P + DG H + I + + + +D D+P + +D+ ++ +GG F
Sbjct: 1230 PQTYMDGLLHYVSVISDNSGLRLLID----DQPLKNNQKLRDFSDSQQSLRLGGSQF 1282
>UNIPROTKB|Q16787 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008544 "epidermis
development" evidence=TAS] [GO:0005198 "structural molecule
activity" evidence=NAS] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0031581 "hemidesmosome assembly" evidence=TAS] [GO:0034329
"cell junction assembly" evidence=TAS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0030155 GO:GO:0005198
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
Reactome:REACT_111155 Pathway_Interaction_DB:syndecan_4_pathway
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0008544 GO:GO:0005604 DrugBank:DB00009 DrugBank:DB00029
DrugBank:DB00031 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0031581 DrugBank:DB00015 GO:GO:0045995 Orphanet:79402
eggNOG:NOG292643 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:L34155 EMBL:AY327115 EMBL:AY327116 EMBL:AB107369 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 EMBL:X85107 EMBL:X85108 EMBL:X84900
IPI:IPI00377045 IPI:IPI00743994 IPI:IPI00790908 PIR:A55347
RefSeq:NP_000218.2 RefSeq:NP_001121189.1 RefSeq:NP_937762.1
UniGene:Hs.436367 ProteinModelPortal:Q16787 SMR:Q16787
IntAct:Q16787 MINT:MINT-1431248 STRING:Q16787 PhosphoSite:Q16787
DMDM:215274012 PaxDb:Q16787 PRIDE:Q16787 DNASU:3909
Ensembl:ENST00000313654 Ensembl:ENST00000399516 GeneID:3909
KEGG:hsa:3909 UCSC:uc002kuq.3 CTD:3909 GeneCards:GC18P021269
HGNC:HGNC:6483 HPA:CAB010757 HPA:HPA009309 MIM:226700 MIM:245660
MIM:600805 neXtProt:NX_Q16787 Orphanet:79404 Orphanet:2407
PharmGKB:PA30272 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
OMA:DSCQGCS OrthoDB:EOG4FBHS0 ChiTaRS:LAMA3 GenomeRNAi:3909
NextBio:15345 PMAP-CutDB:Q6VU68 ArrayExpress:Q16787 Bgee:Q16787
CleanEx:HS_LAMA3 Genevestigator:Q16787 GermOnline:ENSG00000053747
GO:GO:0005610 Uniprot:Q16787
Length = 3333
Score = 359 (131.4 bits), Expect = 5.7e-31, P = 5.7e-31
Identities = 87/294 (29%), Positives = 155/294 (52%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84
K + F++D++TTS + G++F+ K+ ++ALY+ G++ ++ + + S +K
Sbjct: 3007 KPRSQFAVDMQTTSSR-GLVFHTG-TKN-SFMALYLSKGRLVFALGTDGKKLRIKSKEKC 3063
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
DG+WHTV F G+L +DG EG G+S T++I P YLG P +
Sbjct: 3064 N-DGKWHTVVFGHDGEKGRLVVDGLRAREGSLPGNS-TISIRAPVYLGSPPSGKPKSLPT 3121
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGVFFYNSGGYVKGVEQFRV 203
N +FVGCL+N + ++K + +S GV C E G++F GG+V +
Sbjct: 3122 N-----SFVGCLKNFQLDSKPLYTPSSSFGVSSCLGGPLEKGIYFSEEGGHVVLAHSVLL 3176
Query: 204 GREMELKMDVKPRNISGLLLSVHSKKDYFILQMID-GSVKATVDNGKGPISAIYTPSDPY 262
G E +L ++PR+++G+L+ + S+ + ++ G V A++D+G G S TP
Sbjct: 3177 GPEFKLVFSIRPRSLTGILIHIGSQPGKHLCVYLEAGKVTASMDSGAGGTSTSVTPKQS- 3235
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGP-PGSSETDTNNAVFIGGHP 315
CDGQWH++ ++++ + +D+ ++ G P P +S T + +GG P
Sbjct: 3236 -LCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPAS---TQEPLHLGGAP 3285
Score = 127 (49.8 bits), Expect = 0.00043, P = 0.00043
Identities = 60/265 (22%), Positives = 119/265 (44%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSG-PMALSSGDKLILDG 88
F I+TT ++ G++F+ + +++L ++DG++ + S P GD I +G
Sbjct: 2622 FGQTIQTTVDR-GLLFFAENGDR--FISLNIEDGKLMVRYKLNSELPKERGVGDA-INNG 2677
Query: 89 EWHTVEFSRQQLSGKL--KIDGQ-VVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGN 145
H+++ +L ++ +D Q + +GE + F +YLGG+P+ + R N
Sbjct: 2678 RDHSIQIKIGKLQKRMWINVDVQNTIIDGE-------VFDFSTYYLGGIPI--AIRERFN 2728
Query: 146 LGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSD--KTESGVFFYNSGGYVKGVEQFRV 203
+ F GC++NLK + +V+ T CS+ K F + GG + +
Sbjct: 2729 IS-TPAFRGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRSASF-SRGGQLSFTDLGLP 2786
Query: 204 GRE-MELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVK-ATVDNGKGPISAIYTPSDP 261
+ ++ + SG+LL + + + DG ++ +T D+G S I+ P
Sbjct: 2787 PTDHLQASFGFQTFQPSGILLDHQTWTRNLQVTLEDGYIELSTSDSG----SPIF--KSP 2840
Query: 262 YFFCDGQWHTIVAIKTKNVISVAVD 286
+ DG H + I + + + +D
Sbjct: 2841 QTYMDGLLHYVSVISDNSGLRLLID 2865
>RGD|628776 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005608 "laminin-3 complex"
evidence=IDA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005913 "cell-cell adherens junction" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030056 "hemidesmosome"
evidence=IDA] [GO:0031581 "hemidesmosome assembly" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
RGD:628776 GO:GO:0030155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005913 GO:GO:0030334
GO:GO:0016337 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0030056 Pfam:PF02210
GO:GO:0031581 GO:GO:0045995 eggNOG:NOG292643 GO:GO:0005606
GO:GO:0005608 HOGENOM:HOG000048708 HOVERGEN:HBG100777 EMBL:U61261
IPI:IPI00189741 UniGene:Rn.10597 HSSP:P35070
ProteinModelPortal:P70570 STRING:P70570 PRIDE:P70570
UCSC:RGD:628776 NextBio:657622 Genevestigator:P70570 Uniprot:P70570
Length = 1725
Score = 352 (129.0 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 97/311 (31%), Positives = 159/311 (51%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S +S + K + FS+DI+TTS + G++FY A K ++ALYV DG++ +
Sbjct: 1382 GDSPTSHLLLKLPQELLKPRSQFSLDIQTTSPK-GLVFY-AGTKD-SFLALYVADGRVVF 1438
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G + L S ++ DG+WHTV F +L +DG EG G+S T++
Sbjct: 1439 ALGAGGKKLRLRSKERYH-DGKWHTVVFGLNGGKARLVVDGLRAQEGSLPGNS-TISPRE 1496
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGV 186
YLG +PL+ +L + +FVGCLR+ + N+K + GV PC E G+
Sbjct: 1497 QVYLG-LPLSRKPK---SLPQH-SFVGCLRDFQLNSKPLDSPSARFGVSPCLGGSLEKGI 1551
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFI-LQMIDGSVKATV 245
+F GG+V +G E++L ++PR+++G+L+ V S+ + + M G V +V
Sbjct: 1552 YFSQGGGHVILANSVSLGPELKLTFSIRPRSLTGVLIHVGSQSGQRLSVYMEAGKVTTSV 1611
Query: 246 DNGKGPISAIYTPSDPYFFCDGQWHTI-VAIKTKNVISVAVDSMTTDKPGLGPPGSSETD 304
+ G TP CDGQWH++ V+IK + ++ + +D T + P S
Sbjct: 1612 SSDAGGSVTSITPKQS--LCDGQWHSVAVSIKQR-ILHLELD--TDSSYTVAPLSFSPNS 1666
Query: 305 TNNAVFIGGHP 315
T ++ +GG P
Sbjct: 1667 TRGSLHVGGVP 1677
Score = 137 (53.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 60/291 (20%), Positives = 128/291 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+F I+TT ++ G++F+ + + +++L ++DG + + S P I DG
Sbjct: 1012 NFIQTIQTTVDR-GLLFFAENQDN--FISLNIEDGNLMVRYKLNSEPPKEKGIRDTINDG 1068
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGL 148
+ H++ + +L ++ I+ V E + + + F +YLGG+P+ + R N+
Sbjct: 1069 KDHSILITIGKLQKRMWIN---VNERSVRIEGEIFD-FSTYYLGGIPI--AIRERFNIS- 1121
Query: 149 NDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTES-GVFFYNSGGYVK--GVEQFRVGR 205
F GC++NLK + +V+ T CS+ + ++ GG + ++ R
Sbjct: 1122 TPAFQGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRTASFSRGGQMSFTNLDVPSTDR 1181
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
+L + SG LL+ ++ ++ + DG ++ + + PI P +
Sbjct: 1182 -FQLSFGFQTFQPSGTLLNHQTRTSSLLVTLEDGHIELSTRDSNIPIF-----KSPGTYM 1235
Query: 266 DGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPF 316
DG H + I + + + +D + P S ++ ++ +GG F
Sbjct: 1236 DGLLHHVSVISDTSGLRLLIDDQVLRRNQRLP---SFSNAQQSLRLGGGHF 1283
>UNIPROTKB|F1NQ51 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:AADN02021360
EMBL:AADN02021358 EMBL:AADN02021359 IPI:IPI00597868
Ensembl:ENSGALT00000024287 Uniprot:F1NQ51
Length = 3356
Score = 355 (130.0 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 94/301 (31%), Positives = 145/301 (48%)
Query: 6 IAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQI 65
+ G + +S + Y + ++ FS+DI+T S + G+I ++ Y AL++ G+
Sbjct: 3007 LLGNTPNSFVSYMFSSSSPMDRLHFSVDIRTRSSR-GLIVFMEGRSENSYTALHISKGRF 3065
Query: 66 HYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGE--SKGSSKTL 123
+S G + + + K DG+WHTV SR + L +DG G G + T
Sbjct: 3066 VFSLGSGRRRIKIKTSVKYN-DGQWHTVVCSRDGENVLLVVDGLRAQHGRLGRLGRASTN 3124
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKT- 182
+I P YLGG PL L R N+ + +F GCLRN K N K++ V+PC D
Sbjct: 3125 DIKPPVYLGGPPL----LKRQNIPMK-SFKGCLRNFKMNGKVMNTPQQKKDVLPCLDAPM 3179
Query: 183 ESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKD-YFILQMIDGSV 241
E G+ F+ GGYV V ++G + + ++PR +G+LL SK D Y + M +G +
Sbjct: 3180 EMGIHFFKEGGYV-AVGNLQMGLDFRIVFAIRPRRSTGVLLHSGSKPDNYLTIYMKEGKL 3238
Query: 242 KATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS 301
A + G G TP +GQWHTI + N + + V + + G PP S
Sbjct: 3239 VAAGNGGGGEFQTSVTPRQS--LTNGQWHTITVSQKVNTLQLEVGTESNYTTG-HPPFSP 3295
Query: 302 E 302
E
Sbjct: 3296 E 3296
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 344 (126.2 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 102/321 (31%), Positives = 165/321 (51%)
Query: 8 GTSKSSRIEYPTITGRFKNKF---DFSIDIKT-TSEQDGIIFYVADVKHIDYVALYVKDG 63
G S+ S + I G FKN+ F++ + T G++FY+A+ DY L ++ G
Sbjct: 2724 GLSRHSHL----IMG-FKNRTVRTSFAVKLSVRTFAHSGVLFYMANTNQQDYAVLQLQAG 2778
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTV--EFSRQQLSGKLKIDGQVVAEGESKGSSK 121
++H S + G G A ++ I DG WHTV EFS++ + + +DG +KG
Sbjct: 2779 RLHLSCDLGKGA-ASATLKNTISDGRWHTVKAEFSKKTVV--VSVDGIESDHISTKGH-- 2833
Query: 122 TLNIFGPFYLGGVPLNTSTLVR-GNLGLNDTFVGCLRNLKSNNKLVQ-DKHTSSGVIP-C 178
TL++ G Y+GG+P T T R GN+ + C+++L N + + SS C
Sbjct: 2834 TLDVEGKLYVGGLP-PTYTAKRIGNV--THSVAACVQDLTFNGVPMNLNNPLSSHATGFC 2890
Query: 179 SDKTESGVFFYNSGGYVKGVEQ-FRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQM 236
+ G FF N GY +++ + VG ++ + ++ + G+LL + S K D L++
Sbjct: 2891 FSNAQDGTFF-NGSGYAAFMKEGYNVGSDVTVSLEFRSTAPDGVLLGISSTKVDAIGLEL 2949
Query: 237 IDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLG 296
++G V V+NG G IS S CDG+W T+VA K K+ +S+ VD +T +
Sbjct: 2950 LNGQVVFNVNNGAGRISVSSRSS--VSMCDGRWRTLVAKKQKHSLSLTVDGVTVNAEN-- 3005
Query: 297 PPGSSET--DTNNAVFIGGHP 315
P SS T +T N +++GGHP
Sbjct: 3006 -PHSSSTSAETKNPIYVGGHP 3025
Score = 215 (80.7 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 76/300 (25%), Positives = 143/300 (47%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVE 94
KT S +G++ Y+A D++++ + +G++H +F GSG + ++S + G W+ +
Sbjct: 2337 KTLSP-NGLLLYLASNGTRDFLSIELVEGKVHLTFELGSGALTMTSS-RTYNTGSWYRIA 2394
Query: 95 FSRQQLSGKLKI------DGQVVAEGESKGSSKTLNI--FGPFYLGGVPLNTSTLVRGNL 146
R + G L + + V E E+ G + LN P Y+GG+P S +R +
Sbjct: 2395 LQRNKRKGHLSVMAASNPSEREVLEAEAPGQASDLNRSDLDPIYIGGLP--ASRPIRRQV 2452
Query: 147 GLNDTFVGCLRNL---KSNNKLVQDKHTSSGVIP-CSDKTESGVFFYNSGGYVKGVEQFR 202
+ +FVGC++N+ ++N L+++ + GV C K V + GG+++ +
Sbjct: 2453 -VARSFVGCMKNVEIARTNFDLLREAY---GVKKGCVLKPIRSVSVFG-GGFLE-MPAVL 2506
Query: 203 VGREMELKMDVKPRNISGLLL------SVHSKKDYFILQMIDGSVKATVDNGKGPISAIY 256
+ E+ R SG++L S H+++ +L ++ G ++ V G +A+
Sbjct: 2507 LSSHTEIMSTFSSRRDSGVILAGFSRSSRHTQQPLLLLLLVSGGLELRVSVSDG--AAVQ 2564
Query: 257 TPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETD-TNNAVFIGGHP 315
F DG H+++ + K I+V VD + L P S+E T ++IGG P
Sbjct: 2565 KAELRGSFSDGHEHSLILQRNKRTITVVVDEGI--QASLKLPASAEKSLTLERLYIGGVP 2622
Score = 180 (68.4 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 81/321 (25%), Positives = 146/321 (45%)
Query: 18 PTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA 77
P +T N ++ +KT SE D ++FY+ D++AL + DG++ + ++ GSG
Sbjct: 2136 PEVTS--SNFNTLTLTMKT-SEPDNLLFYMGSSSSEDFMALEMHDGKVSFLWDAGSGHNR 2192
Query: 78 LSSGDKLILDGEWHTVEFSRQQLSGKLKI---DGQVV--AEGESKGSSKTLNIFGP--FY 130
L D I + +WH + +R L + D + + + + GS+ +++ Y
Sbjct: 2193 LEYPDVQINNDKWHRINATRFGRHATLTVQQTDSEPLPAVKSSAAGSATVMDVNKHTWVY 2252
Query: 131 LGGVPLNTSTLVRGNLGLNDT-FVGCLRN--LKSNNKLVQDKHTSSGVIP-C--SDKTES 184
+GG+ V+ + + T F GC+ L NN + + G C S +TE
Sbjct: 2253 VGGL----GGQVKKSPAVKITHFRGCMGEALLNENNIGLWNYAERQGECGGCFRSPRTED 2308
Query: 185 GVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSVK 242
F ++ G+ VE+ + M K + +GLLL + S +D+ +++++G V
Sbjct: 2309 TSFHFDGSGF-SVVEKSLRSMSTSVVMFFKTLSPNGLLLYLASNGTRDFLSIELVEGKVH 2367
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAI--KTKNVISVAVDSMTTDKPGLGP--P 298
T + G G ++ T S Y G W+ I K K +SV S +++ L P
Sbjct: 2368 LTFELGSGALTM--TSSRTYN--TGSWYRIALQRNKRKGHLSVMAASNPSEREVLEAEAP 2423
Query: 299 GSSETDTNNA----VFIGGHP 315
G + +D N + ++IGG P
Sbjct: 2424 GQA-SDLNRSDLDPIYIGGLP 2443
Score = 168 (64.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 40/132 (30%), Positives = 74/132 (56%)
Query: 31 SIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLIL-DGE 89
S++ ++T+ DG++ ++ K +D + L + +GQ+ ++ N G+G +++SS + + DG
Sbjct: 2922 SLEFRSTAP-DGVLLGISSTK-VDAIGLELLNGQVVFNVNNGAGRISVSSRSSVSMCDGR 2979
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGN-LGL 148
W T+ +Q+ S L +DG V SS + P Y+GG P + V+ N L +
Sbjct: 2980 WRTLVAKKQKHSLSLTVDGVTVNAENPHSSSTSAETKNPIYVGGHPAD----VKQNCLSV 3035
Query: 149 NDTFVGCLRNLK 160
+F GC+RNL+
Sbjct: 3036 RQSFRGCMRNLR 3047
>UNIPROTKB|E9PTR0 [details] [associations]
symbol:E9PTR0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005606
IPI:IPI00568879 Ensembl:ENSRNOT00000052028 ArrayExpress:E9PTR0
Uniprot:E9PTR0
Length = 1622
Score = 326 (119.8 bits), Expect = 7.4e-28, P = 7.4e-28
Identities = 85/267 (31%), Positives = 138/267 (51%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S +S + + K + FS+DI+TTS + G++FY K ++ALYV DG++ +
Sbjct: 1368 GDSPTSHLLFKLPQELLKPRSQFSLDIQTTSPK-GLVFYTG-TKD-SFLALYVADGRVVF 1424
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G + L S ++ DG+WHTV F +L +DG EG G+S T++
Sbjct: 1425 ALGAGGKKLRLRSKERYH-DGKWHTVVFGLNGGKARLVVDGLRAQEGSLPGNS-TISPRE 1482
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGV 186
YLG +PL+ +L + +FVGCLR+ + N+K + GV PC E G+
Sbjct: 1483 QVYLG-LPLSRKPK---SLPQH-SFVGCLRDFQLNSKPLDSPSARFGVSPCLGGSLEKGI 1537
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFI-LQMIDGSVKATV 245
+F GG+V +G E++L ++PR+++G+L+ V S+ + + M G V +V
Sbjct: 1538 YFSQGGGHVILANSVSLGPELKLTFSIRPRSLTGVLIHVGSQSGQRLSVYMEAGKVTTSV 1597
Query: 246 DNGKGPISAIYTPSDPYFFCDGQWHTI 272
+ G TP CDGQWH++
Sbjct: 1598 SSDAGGSVTSITPKQS--LCDGQWHSV 1622
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 60/291 (20%), Positives = 128/291 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+F I+TT ++ G++F+ + + +++L ++DG + + S P I DG
Sbjct: 998 NFIQTIQTTVDR-GLLFFAENQDN--FISLNIEDGNLMVRYKLNSEPPKEKGIRDTINDG 1054
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGL 148
+ H++ + +L ++ I+ V E + + + F +YLGG+P+ + R N+
Sbjct: 1055 KDHSILITIGKLQKRMWIN---VNERSVRIEGEIFD-FSTYYLGGIPI--AIRERFNIS- 1107
Query: 149 NDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTES-GVFFYNSGGYVK--GVEQFRVGR 205
F GC++NLK + +V+ T CS+ + ++ GG + ++ R
Sbjct: 1108 TPAFQGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRTASFSRGGQMSFTNLDVPSTDR 1167
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
+L + SG LL+ ++ ++ + DG ++ + + PI P +
Sbjct: 1168 -FQLSFGFQTFQPSGTLLNHQTRTSSLLVTLEDGHIELSTRDSNIPIF-----KSPGTYM 1221
Query: 266 DGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPF 316
DG H + I + + + +D + P S ++ ++ +GG F
Sbjct: 1222 DGLLHHVSVISDTSGLRLLIDDQVLRRNQRLP---SFSNAQQSLRLGGGHF 1269
>MGI|MGI:99909 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005608 "laminin-3 complex" evidence=ISO] [GO:0005610
"laminin-5 complex" evidence=IDA] [GO:0005913 "cell-cell adherens
junction" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0030056
"hemidesmosome" evidence=ISO] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031581 "hemidesmosome assembly" evidence=ISO]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:99909 GO:GO:0030155 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOVERGEN:HBG052300 GO:GO:0005610 EMBL:AJ293592
EMBL:U88353 EMBL:X84014 EMBL:X84013 EMBL:L20478 IPI:IPI00125058
IPI:IPI00988354 UniGene:Mm.42012 ProteinModelPortal:Q61789
SMR:Q61789 STRING:Q61789 PhosphoSite:Q61789 PaxDb:Q61789
PRIDE:Q61789 UCSC:uc008ecf.2 UCSC:uc008ech.1 HOGENOM:HOG000048708
CleanEx:MM_LAMA3 Genevestigator:Q61789
GermOnline:ENSMUSG00000024421 Uniprot:Q61789
Length = 3333
Score = 327 (120.2 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 91/313 (29%), Positives = 157/313 (50%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S +S + + K + FS+DI+TTS + G++F+ +VALY+ +G + +
Sbjct: 2990 GDSPTSHLLFKLPQELLKPRLQFSLDIQTTSSR-GLVFHTGT--RDSFVALYLSEGHVIF 3046
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G + L S ++ DG+WH+V F L +DG EG G+S T++
Sbjct: 3047 ALGAGGKKLRLRSKERYH-DGKWHSVVFGLSGRKVHLVVDGLRAQEGSLPGNS-TISPRE 3104
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGV 186
YLG P S + + +FVGCLRN + ++K + SGV PC E G+
Sbjct: 3105 QVYLGLSPSRKSKSLPQH-----SFVGCLRNFQLDSKPLDSPSARSGVSPCLGGSLEKGI 3159
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK-DYFILQMIDGSVKATV 245
+F GG+V + + L + ++PR+++G+L+ + S+ ++ + M G V ++
Sbjct: 3160 YFSQGGGHVVLANSVSLEPALTLTLSIRPRSLTGVLIHIASQSGEHLSVYMEAGKVTTSM 3219
Query: 246 DNGKGPISAIYTPSDPYFFCDGQWHTI-VAIKTKNVISVAVDSMTTDKPG-LG-PPGSSE 302
++ G TP CDGQWH++ V+IK ++ + + +D+ + G L PP S
Sbjct: 3220 NSEAGGTVTSITPKRS--LCDGQWHSVTVSIK-QHTLHLELDTYNSYTAGQLSFPPNS-- 3274
Query: 303 TDTNNAVFIGGHP 315
T ++ IGG P
Sbjct: 3275 --TRGSLHIGGVP 3285
Score = 128 (50.1 bits), Expect = 0.00033, P = 0.00033
Identities = 54/260 (20%), Positives = 113/260 (43%)
Query: 34 IKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTV 93
I+TT ++ G++F+ + + +++L ++DG + + S P I +G H +
Sbjct: 2625 IQTTVDR-GLLFFAENQDN--FISLNIEDGNLMVKYKLNSEPPKEKGIRDTINNGRDHMI 2681
Query: 94 EFSRQQLSGKLKID---GQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLND 150
S + ++ I+ ++ EGE + F +YLGG+P+ +R L+
Sbjct: 2682 LISIGKSQKRMLINMNKHSIIIEGE-------IFDFSTYYLGGIPI----AIRERFPLST 2730
Query: 151 -TFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTES-GVFFYNSGGYVK--GVEQFRVGRE 206
F GC++NLK + +V+ T CS+ + ++ GG + ++ + R
Sbjct: 2731 PAFQGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRTASFSRGGQMSFTNLDVPSLDR- 2789
Query: 207 MELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCD 266
+L + SG LL+ ++ ++ + DG + + + PI P + D
Sbjct: 2790 FQLSFGFQTFQPSGTLLNHQTRTSSLLVTLEDGHIALSTRDSSSPIF-----KSPGTYMD 2844
Query: 267 GQWHTIVAIKTKNVISVAVD 286
G H + I + + + +D
Sbjct: 2845 GLLHHVSVISDTSGLRLLID 2864
>UNIPROTKB|F1LU77 [details] [associations]
symbol:F1LU77 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 GO:GO:0005610 IPI:IPI00768265
Ensembl:ENSRNOT00000015750 ArrayExpress:F1LU77 Uniprot:F1LU77
Length = 3149
Score = 326 (119.8 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 85/267 (31%), Positives = 138/267 (51%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G S +S + + K + FS+DI+TTS + G++FY K ++ALYV DG++ +
Sbjct: 2895 GDSPTSHLLFKLPQELLKPRSQFSLDIQTTSPK-GLVFYTG-TKD-SFLALYVADGRVVF 2951
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G + L S ++ DG+WHTV F +L +DG EG G+S T++
Sbjct: 2952 ALGAGGKKLRLRSKERYH-DGKWHTVVFGLNGGKARLVVDGLRAQEGSLPGNS-TISPRE 3009
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGV 186
YLG +PL+ +L + +FVGCLR+ + N+K + GV PC E G+
Sbjct: 3010 QVYLG-LPLSRKPK---SLPQH-SFVGCLRDFQLNSKPLDSPSARFGVSPCLGGSLEKGI 3064
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFI-LQMIDGSVKATV 245
+F GG+V +G E++L ++PR+++G+L+ V S+ + + M G V +V
Sbjct: 3065 YFSQGGGHVILANSVSLGPELKLTFSIRPRSLTGVLIHVGSQSGQRLSVYMEAGKVTTSV 3124
Query: 246 DNGKGPISAIYTPSDPYFFCDGQWHTI 272
+ G TP CDGQWH++
Sbjct: 3125 SSDAGGSVTSITPKQS--LCDGQWHSV 3149
Score = 137 (53.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 60/291 (20%), Positives = 128/291 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+F I+TT ++ G++F+ + + +++L ++DG + + S P I DG
Sbjct: 2525 NFIQTIQTTVDR-GLLFFAENQDN--FISLNIEDGNLMVRYKLNSEPPKEKGIRDTINDG 2581
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGL 148
+ H++ + +L ++ I+ V E + + + F +YLGG+P+ + R N+
Sbjct: 2582 KDHSILITIGKLQKRMWIN---VNERSVRIEGEIFD-FSTYYLGGIPI--AIRERFNIS- 2634
Query: 149 NDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTES-GVFFYNSGGYVK--GVEQFRVGR 205
F GC++NLK + +V+ T CS+ + ++ GG + ++ R
Sbjct: 2635 TPAFQGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRTASFSRGGQMSFTNLDVPSTDR 2694
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
+L + SG LL+ ++ ++ + DG ++ + + PI P +
Sbjct: 2695 -FQLSFGFQTFQPSGTLLNHQTRTSSLLVTLEDGHIELSTRDSNIPIF-----KSPGTYM 2748
Query: 266 DGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPF 316
DG H + I + + + +D + P S ++ ++ +GG F
Sbjct: 2749 DGLLHHVSVISDTSGLRLLIDDQVLRRNQRLP---SFSNAQQSLRLGGGHF 2796
>ZFIN|ZDB-GENE-050208-475 [details] [associations]
symbol:lama3 "laminin, alpha 3" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-050208-475 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 EMBL:BX465190 Pfam:PF02210 GO:GO:0045995
GO:GO:0005606 GeneTree:ENSGT00700000104042 IPI:IPI00994085
Ensembl:ENSDART00000126827 Bgee:F1QV32 Uniprot:F1QV32
Length = 1681
Score = 274 (101.5 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 79/305 (25%), Positives = 150/305 (49%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG 72
S++++ N+ FS+D++TTS + G++ +++ + V LY+ +G++ S G
Sbjct: 1344 SKMQFELDPEELNNRPHFSLDVQTTSSE-GLLLHLSGKHGVPLVVLYLYEGKVKLSV--G 1400
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGES-KGSSKTLNIFGPFYL 131
+ S + I DG+WH+++F+ ++ S L +D G+ KG ++ L P Y+
Sbjct: 1401 EDEIVSS---RRINDGQWHSIQFTVKKRSSHLAVDDLRTLNGQPLKGFTQDLQ--SPVYV 1455
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESGVFFYN 190
G L T N+ + +GC+R L+ + L+ + + G PC +TE G +F
Sbjct: 1456 G--QLQTRHQTYKNVP-QKSIIGCIRELRVSKLLLMNPAVNQGATPCFKGRTEKGAYFAG 1512
Query: 191 SGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFI-LQMIDGSVKATVDNGK 249
+G ++ + F G +L +++PRN++GL+ + L + G V V++GK
Sbjct: 1513 NGAHLVLEKYFISGSTYDLTFELRPRNLTGLIFHKRDNLGQTVTLFLKKGKVVVKVNDGK 1572
Query: 250 GPISAIYTPSDPYFFCDGQWHTI-VAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNA 308
S TP+ P C G +H + V+I+ K+ I + VD K + + +
Sbjct: 1573 QRYSTAVTPTRP--LC-GAFHNVSVSIRQKS-IELRVDDA---KSRIRRRSIARLSVHEE 1625
Query: 309 VFIGG 313
++IGG
Sbjct: 1626 IYIGG 1630
>UNIPROTKB|E1BQW4 [details] [associations]
symbol:EGFLAM "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005539 "glycosaminoglycan binding"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005614 "interstitial matrix" evidence=IEA] [GO:0010811
"positive regulation of cell-substrate adhesion" evidence=IEA]
[GO:0019800 "peptide cross-linking via chondroitin 4-sulfate
glycosaminoglycan" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] InterPro:IPR000742 InterPro:IPR003961
Pfam:PF00008 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0030198 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0010811 InterPro:IPR001791
Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
GeneTree:ENSGT00530000063501 GO:GO:0005604 GO:GO:0005614
Pfam:PF02210 OMA:FMRFKTT GO:GO:0005539 GO:GO:0019800
EMBL:AADN02052267 EMBL:AADN02052268 EMBL:AADN02052269
EMBL:AADN02052270 EMBL:AADN02052271 EMBL:AADN02052272
EMBL:AADN02052273 IPI:IPI00582245 ProteinModelPortal:E1BQW4
Ensembl:ENSGALT00000005914 Uniprot:E1BQW4
Length = 1022
Score = 212 (79.7 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 50/155 (32%), Positives = 84/155 (54%)
Query: 17 YPTITGR-FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDGQIHYSFNC 71
Y IT KN + F I ++ +E +DG++ Y + +H D+++L + I + FNC
Sbjct: 404 YSYITFEPLKNSYQTFQITLEFRAESEDGLLLYCGENEHGRGDFMSLAIIRRSIQFRFNC 463
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
G+G ++S +K+ L G WH++ R L+G L++D G+S+G + PFY+
Sbjct: 464 GTGVAVITSENKIKL-GNWHSITLFRDGLNGWLRMDNDAPVTGKSQGQYSKITFRTPFYV 522
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV 166
GG P + L+R G N F GC++ L N K++
Sbjct: 523 GGAP-SVYWLIRA-AGTNRGFQGCVQLLSVNGKMI 555
Score = 174 (66.3 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 40/153 (26%), Positives = 78/153 (50%)
Query: 17 YPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM 76
+P + + +F + + E G++ Y D D++++ + G + + F+CGSG
Sbjct: 634 WPLEPQNYLSFMEFEMTFRPDLET-GVLLYSYDTNSKDFLSINMVAGYVEFRFDCGSGTA 692
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
+ S + + L G+WH + SR +G L++D Q EG ++G+ + +LGGVP
Sbjct: 693 VIRSEEPVSL-GQWHELRVSRTAKNGILQVDKQKPVEGMAEGAFTQIKCSSEIFLGGVP- 750
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDK 169
+ T V+ N G+ F G ++ + N++ + K
Sbjct: 751 SYDT-VKKNSGILRPFTGSIQKIILNDRTIDVK 782
Score = 156 (60.0 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 49/173 (28%), Positives = 84/173 (48%)
Query: 20 ITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPM 76
++G N F + KTT ++ G++ + D + D+++L +++G + +S+N GSG
Sbjct: 862 VSGSRTNVF---MRFKTTMKE-GLLMWRGDSPMRPNSDFISLGLQEGALLFSYNLGSGIA 917
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG--- 133
++ DG WH V+ R SGK+ +D G+S G + LNI G Y+GG
Sbjct: 918 SIVVNGSFS-DGRWHRVKAVRDGQSGKVTVDDYGARTGKSPGKMRQLNINGDLYVGGMKE 976
Query: 134 VPLNTST-LVRGNLGLNDTFVGCLRNLKSNN----KLVQDKHTSSGVIPCSDK 181
+ L+T+ +RG VGC+ +L + LV+D + C K
Sbjct: 977 IALHTNRQYLRG-------LVGCISHLTLSTDYHISLVEDAADGKNINTCGTK 1022
Score = 113 (44.8 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 207 MELKMDVKPRNISGLLLSVH--SKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFF 264
ME +M +P +G+LL + + KD+ + M+ G V+ D G G +A+ +P
Sbjct: 645 MEFEMTFRPDLETGVLLYSYDTNSKDFLSINMVAGYVEFRFDCGSG--TAVIRSEEPVSL 702
Query: 265 CDGQWHTIVAIKT-KNVISVAVDSMTTDKP--GLGPPGSSETDTNNAVFIGGHPFLSLSS 321
GQWH + +T KN I + VD KP G+ ++ ++ +F+GG P
Sbjct: 703 --GQWHELRVSRTAKNGI-LQVDKQ---KPVEGMAEGAFTQIKCSSEIFLGGVPSYDTVK 756
Query: 322 KKSG 325
K SG
Sbjct: 757 KNSG 760
Score = 84 (34.6 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 230 DYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMT 289
D+ L + +G++ + + G G S + S F DG+WH + A++ V VD
Sbjct: 895 DFISLGLQEGALLFSYNLGSGIASIVVNGS----FSDGRWHRVKAVRDGQSGKVTVDDYG 950
Query: 290 TDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKK 323
+ G P + + N +++GG ++L + +
Sbjct: 951 A-RTGKSPGKMRQLNINGDLYVGGMKEIALHTNR 983
>MGI|MGI:2146149 [details] [associations]
symbol:Egflam "EGF-like, fibronectin type III and laminin G
domains" species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005539 "glycosaminoglycan binding" evidence=IDA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005614 "interstitial matrix"
evidence=IDA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IDA] [GO:0019800 "peptide cross-linking via
chondroitin 4-sulfate glycosaminoglycan" evidence=IDA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
MGI:MGI:2146149 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
SUPFAM:SSF49265 GO:GO:0030198 GO:GO:0045202 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0010811
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
GeneTree:ENSGT00530000063501 GO:GO:0005604 GO:GO:0005614
Pfam:PF02210 HSSP:P00740 CTD:133584 HOGENOM:HOG000112344
HOVERGEN:HBG107839 OrthoDB:EOG434W58 eggNOG:NOG238064 OMA:FMRFKTT
GO:GO:0005539 GO:GO:0019800 EMBL:DQ223720 EMBL:AK031136
EMBL:AK033332 EMBL:AK037223 EMBL:AK041546 EMBL:AC105969
EMBL:AC158747 EMBL:BC051455 EMBL:BC095994 EMBL:BC150710
IPI:IPI00221657 IPI:IPI00756051 RefSeq:NP_848863.1
UniGene:Mm.203208 ProteinModelPortal:Q4VBE4 SMR:Q4VBE4
IntAct:Q4VBE4 STRING:Q4VBE4 PhosphoSite:Q4VBE4 PaxDb:Q4VBE4
PRIDE:Q4VBE4 Ensembl:ENSMUST00000058593 Ensembl:ENSMUST00000096494
GeneID:268780 KEGG:mmu:268780 UCSC:uc007vea.1 UCSC:uc007veb.1
InParanoid:Q4VBE4 NextBio:392491 Bgee:Q4VBE4 Genevestigator:Q4VBE4
Uniprot:Q4VBE4
Length = 1017
Score = 209 (78.6 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20
Identities = 52/163 (31%), Positives = 84/163 (51%)
Query: 15 IEYPTITGR-------FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDG 63
I+YP G KN + F + ++ +E +DG++ Y + +H D+++L +
Sbjct: 386 IQYPQFFGHSYVTFEPLKNSYQAFQVTLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRR 445
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+H+ FNCG+G + S K+ L G WHTV R L+G L+++ G+S+G +
Sbjct: 446 SLHFRFNCGTGIAIIISETKIKL-GAWHTVTLYRDGLNGMLQLNNGTPVTGQSQGQYSKI 504
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV 166
P YLGG P + LVR G N F GC+++L N K +
Sbjct: 505 TFRTPLYLGGAP-SAYWLVRAT-GTNRGFQGCVQSLSVNGKKI 545
Score = 193 (73.0 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 47/148 (31%), Positives = 78/148 (52%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+F I + S DG++ Y D D++++ + G + + F+CGSG L S L L G
Sbjct: 636 EFEITFRPDSG-DGVLLYSYDTGSKDFLSINMAAGHVEFRFDCGSGTGVLRSEAPLTL-G 693
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGL 148
+WH + SR +G L++D Q V EG ++G + ++GGVP N V+ N G+
Sbjct: 694 QWHDLRVSRTAKNGILQVDKQKVVEGMAEGGFTQIKCNTDIFIGGVP-NYDD-VKKNSGI 751
Query: 149 NDTFVGCLRNLKSNNKLVQDKHT-SSGV 175
F G ++ + N++ + KH +SGV
Sbjct: 752 LHPFSGSIQKIILNDRTIHVKHDFTSGV 779
Score = 165 (63.1 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 20 ITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPM 76
++G N F + KTT++ DG++ + D + D+++L ++DG + +S+N GSG
Sbjct: 857 VSGSRSNAF---MRFKTTAK-DGLLLWRGDSPMRPNSDFISLGLRDGALIFSYNLGSGVA 912
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG--- 133
++ DG WH V+ R SGK+ +D G+S G + LNI G Y+GG
Sbjct: 913 SIMVNGSFS-DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGLMRQLNINGALYVGGMKE 971
Query: 134 VPLNTST-LVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDK 181
+ L+T+ +RG +G F + + LV+D + C K
Sbjct: 972 IALHTNRQYLRGLVGCISHFT---LSTDYHISLVEDAVDGKNINTCGAK 1017
Score = 101 (40.6 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20
Identities = 35/121 (28%), Positives = 54/121 (44%)
Query: 208 ELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E ++ +P + G+LL + KD+ + M G V+ D G G + + P
Sbjct: 636 EFEITFRPDSGDGVLLYSYDTGSKDFLSINMAAGHVEFRFDCGSG--TGVLRSEAPLTL- 692
Query: 266 DGQWHTIVAIKT-KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKS 324
GQWH + +T KN I + VD + G+ G ++ N +FIGG P K S
Sbjct: 693 -GQWHDLRVSRTAKNGI-LQVDKQKVVE-GMAEGGFTQIKCNTDIFIGGVPNYDDVKKNS 749
Query: 325 G 325
G
Sbjct: 750 G 750
Score = 96 (38.9 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 34/140 (24%), Positives = 60/140 (42%)
Query: 189 YNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-----SVHSKKDYFILQMIDGSVKA 243
Y++ +K V R M K K GLLL + D+ L + DG++
Sbjct: 848 YDNPNILKRVSGSRSNAFMRFKTTAK----DGLLLWRGDSPMRPNSDFISLGLRDGALIF 903
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
+ + G G S + S F DG+WH + A++ + VD + G P +
Sbjct: 904 SYNLGSGVASIMVNGS----FSDGRWHRVKAVRDGQSGKITVDDYGA-RTGKSPGLMRQL 958
Query: 304 DTNNAVFIGGHPFLSLSSKK 323
+ N A+++GG ++L + +
Sbjct: 959 NINGALYVGGMKEIALHTNR 978
>UNIPROTKB|A3KN33 [details] [associations]
symbol:EGFLAM "Pikachurin" species:9913 "Bos taurus"
[GO:0045202 "synapse" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008
Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060
SMART:SM00181 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0045202 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG312635
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 EMBL:BC133537 IPI:IPI00707738 RefSeq:NP_001076947.1
UniGene:Bt.12654 ProteinModelPortal:A3KN33 STRING:A3KN33
PRIDE:A3KN33 GeneID:534427 KEGG:bta:534427 CTD:133584
HOGENOM:HOG000112344 HOVERGEN:HBG107839 InParanoid:A3KN33
OrthoDB:EOG434W58 NextBio:20876399 Uniprot:A3KN33
Length = 1018
Score = 199 (75.1 bits), Expect = 9.8e-20, Sum P(2) = 9.8e-20
Identities = 53/161 (32%), Positives = 81/161 (50%)
Query: 15 IEYPTITGR-------FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDG 63
I+YP G KN + F I ++ +E +DG++ Y + +H D+++L V
Sbjct: 395 IQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEHGRGDFMSLAVIRR 454
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+ + FNCG+G + S K+ L G WHTV R L+G L+++ G+S+G +
Sbjct: 455 SLQFRFNCGTGVAIIVSETKIKLGG-WHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKI 513
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
P YLGG P + LVR G N F GC++ L N K
Sbjct: 514 TFRTPLYLGGAP-SAYWLVRAT-GTNRGFQGCVQALTVNGK 552
Score = 192 (72.6 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 44/154 (28%), Positives = 78/154 (50%)
Query: 17 YPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM 76
+P + + +F + + SE DG++ Y D D++++ + G + + F+CGSG
Sbjct: 633 WPLEPRHYLSFMEFEVTFRPDSE-DGVLLYSYDTGSKDFLSINMAGGHVEFRFDCGSGTG 691
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
L S + L L G WH + SR +G L++D Q EG ++G + ++GGVP
Sbjct: 692 VLRSEEPLTL-GHWHELCVSRTAKNGILQVDKQKAVEGMAEGGFTQIKCNSDIFIGGVP- 749
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKH 170
N V+ N G+ F G ++ + N++ + KH
Sbjct: 750 NYDD-VKKNSGILKPFSGSIQKIILNDRTIHVKH 782
Score = 165 (63.1 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 20 ITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPM 76
++G N F + KTT++ DG++ + D + D+++L ++DG + +S+N GSG
Sbjct: 858 VSGSRSNAF---MRFKTTAK-DGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVA 913
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG--- 133
++ DG WH V+ R SGK+ +D G+S G + LNI G Y+GG
Sbjct: 914 SIMVNGSFN-DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKE 972
Query: 134 VPLNTST-LVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDK 181
+ L+T+ +RG +G F + + LV+D + C K
Sbjct: 973 IALHTNRQYMRGLVGCISHFT---LSTDYHISLVEDAVDGKNINTCGAK 1018
Score = 111 (44.1 bits), Expect = 9.8e-20, Sum P(2) = 9.8e-20
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 207 MELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFF 264
ME ++ +P + G+LL + KD+ + M G V+ D G G + + +P
Sbjct: 644 MEFEVTFRPDSEDGVLLYSYDTGSKDFLSINMAGGHVEFRFDCGSG--TGVLRSEEPLTL 701
Query: 265 CDGQWHTIVAIKT-KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKK 323
G WH + +T KN I + VD + G+ G ++ N+ +FIGG P K
Sbjct: 702 --GHWHELCVSRTAKNGI-LQVDKQKAVE-GMAEGGFTQIKCNSDIFIGGVPNYDDVKKN 757
Query: 324 SGP-RTKRRSVFLINANCKAVH 344
SG + S+ I N + +H
Sbjct: 758 SGILKPFSGSIQKIILNDRTIH 779
Score = 95 (38.5 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 34/140 (24%), Positives = 60/140 (42%)
Query: 189 YNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-----SVHSKKDYFILQMIDGSVKA 243
Y++ +K V R M K K GLLL + D+ L + DG++
Sbjct: 849 YDNPDILKRVSGSRSNAFMRFKTTAK----DGLLLWRGDSPMRPNSDFISLGLRDGALVF 904
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
+ + G G S + S F DG+WH + A++ + VD + G P +
Sbjct: 905 SYNLGSGVASIMVNGS----FNDGRWHRVKAVRDGQSGKITVDDYGA-RTGKSPGMMRQL 959
Query: 304 DTNNAVFIGGHPFLSLSSKK 323
+ N A+++GG ++L + +
Sbjct: 960 NINGALYVGGMKEIALHTNR 979
>UNIPROTKB|F1N606 [details] [associations]
symbol:EGFLAM "Pikachurin" species:9913 "Bos taurus"
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0019800 "peptide cross-linking via chondroitin 4-sulfate
glycosaminoglycan" evidence=IEA] [GO:0010811 "positive regulation
of cell-substrate adhesion" evidence=IEA] [GO:0005614 "interstitial
matrix" evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005539 "glycosaminoglycan binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0010811 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS50025 GeneTree:ENSGT00530000063501
GO:GO:0005604 GO:GO:0005614 Pfam:PF02210 OMA:FMRFKTT GO:GO:0005539
GO:GO:0019800 EMBL:DAAA02050595 IPI:IPI00999581
Ensembl:ENSBTAT00000026111 Uniprot:F1N606
Length = 904
Score = 199 (75.1 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 53/161 (32%), Positives = 81/161 (50%)
Query: 15 IEYPTITGR-------FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDG 63
I+YP G KN + F I ++ +E +DG++ Y + +H D+++L V
Sbjct: 395 IQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEHGRGDFMSLAVIRR 454
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+ + FNCG+G + S K+ L G WHTV R L+G L+++ G+S+G +
Sbjct: 455 SLQFRFNCGTGVAIIVSETKIKLGG-WHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKI 513
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
P YLGG P + LVR G N F GC++ L N K
Sbjct: 514 TFRTPLYLGGAP-SAYWLVRAT-GTNRGFQGCVQALTVNGK 552
Score = 197 (74.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 45/154 (29%), Positives = 78/154 (50%)
Query: 17 YPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM 76
+P + + +F I + SE DG++ Y D D++++ + G + + F+CGSG
Sbjct: 633 WPLEPRHYLSFMEFEITFRPDSE-DGVLLYSYDTGSKDFLSINMAGGHVEFRFDCGSGTG 691
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
L S + L L G WH + SR +G L++D Q EG ++G + ++GGVP
Sbjct: 692 VLRSEEPLTL-GHWHELRVSRTAKNGILQVDKQKAVEGMAEGGFTQIKCNSDIFIGGVP- 749
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKH 170
N V+ N G+ F G ++ + N++ + KH
Sbjct: 750 NYDD-VKKNSGILKPFSGSIQKIILNDRTIHVKH 782
Score = 109 (43.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 207 MELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFF 264
ME ++ +P + G+LL + KD+ + M G V+ D G G + + +P
Sbjct: 644 MEFEITFRPDSEDGVLLYSYDTGSKDFLSINMAGGHVEFRFDCGSG--TGVLRSEEPLTL 701
Query: 265 CDGQWHTIVAIKT-KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKK 323
G WH + +T KN I + VD + G+ G ++ N+ +FIGG P K
Sbjct: 702 --GHWHELRVSRTAKNGI-LQVDKQKAVE-GMAEGGFTQIKCNSDIFIGGVPNYDDVKKN 757
Query: 324 SGP-RTKRRSVFLINANCKAVH 344
SG + S+ I N + +H
Sbjct: 758 SGILKPFSGSIQKIILNDRTIH 779
>RGD|1306592 [details] [associations]
symbol:Egflam "EGF-like, fibronectin type III and laminin G
domains" species:10116 "Rattus norvegicus" [GO:0005539
"glycosaminoglycan binding" evidence=IEA;ISO] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA;ISO] [GO:0005614 "interstitial
matrix" evidence=IEA;ISO] [GO:0010811 "positive regulation of
cell-substrate adhesion" evidence=IEA;ISO] [GO:0019800 "peptide
cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA;ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0045202
"synapse" evidence=IEA] InterPro:IPR000742 InterPro:IPR003961
Pfam:PF00008 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 RGD:1306592 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 SUPFAM:SSF49265 GO:GO:0005578
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG312635 InterPro:IPR001791
Pfam:PF00054 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210 CTD:133584
HOGENOM:HOG000112344 HOVERGEN:HBG107839 EMBL:AABR03012233
EMBL:AABR03012676 EMBL:AABR03016535 EMBL:BC168173 IPI:IPI00367947
RefSeq:NP_001102408.2 UniGene:Rn.27713 ProteinModelPortal:B4F785
STRING:B4F785 PRIDE:B4F785 GeneID:365691 KEGG:rno:365691
UCSC:RGD:1306592 NextBio:687885 ArrayExpress:B4F785
Genevestigator:B4F785 Uniprot:B4F785
Length = 1005
Score = 205 (77.2 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 52/163 (31%), Positives = 84/163 (51%)
Query: 15 IEYPTITGR-------FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDG 63
I+YP G KN + F I ++ +E +DG++ Y + +H D+++L +
Sbjct: 382 IQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGESEHGRGDFMSLALIRR 441
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+H+ FNCG+G + S K+ L G WH+V R L+G L+++ G+S+G +
Sbjct: 442 SLHFRFNCGTGMAIIISETKIKL-GAWHSVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKI 500
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV 166
P YLGG P + LVR G N F GC+++L N K +
Sbjct: 501 TFRTPLYLGGAP-SAYWLVRAT-GTNRGFQGCVQSLAVNGKKI 541
Score = 201 (75.8 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 47/148 (31%), Positives = 79/148 (53%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+F I + S DG++ Y D D++++ + G + + F+CGSG L S D L L G
Sbjct: 632 EFEITFRPDSG-DGVLLYSYDTSSKDFLSIIMAAGHVEFRFDCGSGTGVLRSEDTLTL-G 689
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGL 148
+WH + SR +G L++D Q V EG ++G + ++GGVP N V+ N G+
Sbjct: 690 QWHDLRVSRTAKNGILQVDKQKVVEGMAEGGFTQIKCNTDIFIGGVP-NYDD-VKKNSGI 747
Query: 149 NDTFVGCLRNLKSNNKLVQDKHT-SSGV 175
F G ++ + N++ + +H +SGV
Sbjct: 748 LHPFSGSIQKIILNDRTIHVRHDFTSGV 775
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 48/169 (28%), Positives = 80/169 (47%)
Query: 20 ITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPM 76
++G N F + KTT++ DG++ + D + D+++L ++DG + +S+N GSG
Sbjct: 845 VSGSRSNAF---MRFKTTAK-DGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVA 900
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
++ DG WH V+ R SGK+ +D G+S G + LNI G Y+GG+
Sbjct: 901 SIMVNGSFS-DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMK- 958
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNN----KLVQDKHTSSGVIPCSDK 181
+R N VGC+ + + LV+D + C K
Sbjct: 959 --EIALRTNRQYMRGLVGCISHFTLSTDYHISLVEDAVDGKNINTCGAK 1005
Score = 102 (41.0 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 208 ELKMDVKPRNISGLLLSVH--SKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E ++ +P + G+LL + S KD+ + M G V+ D G G + + D
Sbjct: 632 EFEITFRPDSGDGVLLYSYDTSSKDFLSIIMAAGHVEFRFDCGSG--TGVLRSEDTLTL- 688
Query: 266 DGQWHTIVAIKT-KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKS 324
GQWH + +T KN I + VD + G+ G ++ N +FIGG P K S
Sbjct: 689 -GQWHDLRVSRTAKNGI-LQVDKQKVVE-GMAEGGFTQIKCNTDIFIGGVPNYDDVKKNS 745
Query: 325 G 325
G
Sbjct: 746 G 746
Score = 98 (39.6 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 34/140 (24%), Positives = 60/140 (42%)
Query: 189 YNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-----SVHSKKDYFILQMIDGSVKA 243
Y++ +K V R M K K GLLL + D+ L + DG++
Sbjct: 836 YDNPNILKRVSGSRSNAFMRFKTTAK----DGLLLWRGDSPMRPNSDFISLGLRDGALVF 891
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
+ + G G S + S F DG+WH + A++ + VD + G P +
Sbjct: 892 SYNLGSGVASIMVNGS----FSDGRWHRVKAVRDGQSGKITVDDYGA-RTGKSPGMMRQL 946
Query: 304 DTNNAVFIGGHPFLSLSSKK 323
+ N A+++GG ++L + +
Sbjct: 947 NINGALYVGGMKEIALRTNR 966
>UNIPROTKB|Q63HQ2 [details] [associations]
symbol:EGFLAM "Pikachurin" species:9606 "Homo sapiens"
[GO:0030054 "cell junction" evidence=IEA] [GO:0005539
"glycosaminoglycan binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005614 "interstitial matrix"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IEA] [GO:0019800 "peptide cross-linking via
chondroitin 4-sulfate glycosaminoglycan" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] InterPro:IPR000742 InterPro:IPR003961
Pfam:PF00008 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 SUPFAM:SSF49265 GO:GO:0030198 GO:GO:0045202
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0010811 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS50025 GO:GO:0005604 GO:GO:0005614
EMBL:CH471119 Pfam:PF02210 HSSP:P00740 CTD:133584
HOVERGEN:HBG107839 OrthoDB:EOG434W58 EMBL:AK092479 EMBL:AK092994
EMBL:AK096474 EMBL:AK097549 EMBL:AK291602 EMBL:BX647551
EMBL:AC010338 EMBL:AC010457 EMBL:AC091839 EMBL:BC031251
EMBL:BC033177 EMBL:BC033188 EMBL:BC063822 IPI:IPI00334254
IPI:IPI00376634 IPI:IPI00470484 IPI:IPI00743096 IPI:IPI00867652
RefSeq:NP_001192230.1 RefSeq:NP_689616.2 RefSeq:NP_877950.1
RefSeq:NP_877953.1 UniGene:Hs.20103 ProteinModelPortal:Q63HQ2
SMR:Q63HQ2 STRING:Q63HQ2 PhosphoSite:Q63HQ2 DMDM:158705944
PaxDb:Q63HQ2 PRIDE:Q63HQ2 Ensembl:ENST00000322350
Ensembl:ENST00000336740 Ensembl:ENST00000354891
Ensembl:ENST00000397202 Ensembl:ENST00000397210
Ensembl:ENST00000506135 Ensembl:ENST00000514476 GeneID:133584
KEGG:hsa:133584 UCSC:uc003jlb.2 UCSC:uc003jlc.2 UCSC:uc003jle.2
UCSC:uc003jlf.2 UCSC:uc003jlg.2 GeneCards:GC05P038295
HGNC:HGNC:26810 neXtProt:NX_Q63HQ2 PharmGKB:PA147358056
eggNOG:NOG238064 InParanoid:Q63HQ2 OMA:FMRFKTT ChiTaRS:EGFLAM
GenomeRNAi:133584 NextBio:83236 ArrayExpress:Q63HQ2 Bgee:Q63HQ2
CleanEx:HS_EGFLAM Genevestigator:Q63HQ2 GO:GO:0005539 GO:GO:0019800
Uniprot:Q63HQ2
Length = 1017
Score = 199 (75.1 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 48/160 (30%), Positives = 82/160 (51%)
Query: 17 YPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM 76
+P + + +F I + S DG++ Y D D++++ + G + + F+CGSG
Sbjct: 624 WPLEPQHYLSFMEFEITFRPDSG-DGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSGTG 682
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
L S D L L G WH + SR +G L++D Q + EG ++G + ++GGVP
Sbjct: 683 VLRSEDPLTL-GNWHELRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVP- 740
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT-SSGV 175
N V+ N G+ F G ++ + N++ + KH +SGV
Sbjct: 741 NYDD-VKKNSGVLKPFSGSIQKIILNDRTIHVKHDFTSGV 779
Score = 198 (74.8 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 51/163 (31%), Positives = 83/163 (50%)
Query: 15 IEYPTITGR-------FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDG 63
I+YP G KN + F I ++ +E +DG++ Y + +H D+++L +
Sbjct: 386 IQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEHGRGDFMSLAIIRR 445
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+ + FNCG+G + S K+ L G WHTV R L+G L+++ G+S+G +
Sbjct: 446 SLQFRFNCGTGVAIIVSETKIKLGG-WHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYSKI 504
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV 166
P YLGG P + LVR G N F GC+++L N + +
Sbjct: 505 TFRTPLYLGGAP-SAYWLVRAT-GTNRGFQGCVQSLAVNGRRI 545
Score = 164 (62.8 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 20 ITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPM 76
++G N F + KTT++ DG++ + D + D+++L ++DG + +S+N GSG
Sbjct: 857 VSGSRSNVF---MRFKTTAK-DGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVA 912
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG--- 133
++ DG WH V+ R SGK+ +D G+S G + LNI G Y+GG
Sbjct: 913 SIMVNGSFN-DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKE 971
Query: 134 VPLNTST-LVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDK 181
+ L+T+ +RG +G F + + LV+D + C K
Sbjct: 972 IALHTNRQYMRGLVGCISHFT---LSTDYHISLVEDAVDGKNINTCGAK 1017
Score = 108 (43.1 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 39/142 (27%), Positives = 63/142 (44%)
Query: 207 MELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFF 264
ME ++ +P + G+LL + KD+ + + G V+ D G G + + DP
Sbjct: 635 MEFEITFRPDSGDGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSG--TGVLRSEDPLTL 692
Query: 265 CDGQWHTIVAIKT-KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKK 323
G WH + +T KN I + VD + G+ G ++ N +FIGG P K
Sbjct: 693 --GNWHELRVSRTAKNGI-LQVDKQKIVE-GMAEGGFTQIKCNTDIFIGGVPNYDDVKKN 748
Query: 324 SGP-RTKRRSVFLINANCKAVH 344
SG + S+ I N + +H
Sbjct: 749 SGVLKPFSGSIQKIILNDRTIH 770
Score = 93 (37.8 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 34/140 (24%), Positives = 60/140 (42%)
Query: 189 YNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-----SVHSKKDYFILQMIDGSVKA 243
Y++ +K V R M K K GLLL + D+ L + DG++
Sbjct: 848 YDNPDILKRVSGSRSNVFMRFKTTAK----DGLLLWRGDSPMRPNSDFISLGLRDGALVF 903
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
+ + G G S + S F DG+WH + A++ + VD + G P +
Sbjct: 904 SYNLGSGVASIMVNGS----FNDGRWHRVKAVRDGQSGKITVDDYGA-RTGKSPGMMRQL 958
Query: 304 DTNNAVFIGGHPFLSLSSKK 323
+ N A+++GG ++L + +
Sbjct: 959 NINGALYVGGMKEIALHTNR 978
>UNIPROTKB|I3LEG7 [details] [associations]
symbol:EGFLAM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0019800 "peptide cross-linking via chondroitin
4-sulfate glycosaminoglycan" evidence=IEA] [GO:0010811 "positive
regulation of cell-substrate adhesion" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005539 "glycosaminoglycan binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0010811 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS50025 GeneTree:ENSGT00530000063501
GO:GO:0005604 GO:GO:0005614 Pfam:PF02210 OMA:FMRFKTT GO:GO:0005539
GO:GO:0019800 EMBL:CU570705 EMBL:CU633366 EMBL:CU914192
Ensembl:ENSSSCT00000025413 Uniprot:I3LEG7
Length = 1020
Score = 204 (76.9 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 15 IEYPTITGR-------FKNKFD-FSIDIKTTSE-QDGIIFYVADVKHI--DYVALYVKDG 63
I+YP G KN + F I ++ +E +DG++ Y + +H D++AL +
Sbjct: 387 IQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEHGRGDFMALAIIRR 446
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+ + FNCG+G ++S K+ L G WHTV R L+G L+++ G+S+G +
Sbjct: 447 SLQFRFNCGTGVAIITSETKIKL-GAWHTVTLYRDGLNGLLQLNNGTPVTGQSQGQYSKI 505
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
P Y+GG P + LVR G N F GC+++L N K
Sbjct: 506 TFRTPLYVGGAP-SVYWLVRAT-GTNRGFQGCVQSLTVNGK 544
Score = 164 (62.8 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 51/170 (30%), Positives = 85/170 (50%)
Query: 20 ITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPM 76
++G N F + KTT++ DG++ + D + D+++L ++DG + +S+N GSG
Sbjct: 860 VSGSRSNAF---MRFKTTAK-DGLLMWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVA 915
Query: 77 A-LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG-- 133
+ L +G DG WH V+ R SGK+ +D G+S G + LNI G Y+GG
Sbjct: 916 SILVNGS--FNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMK 973
Query: 134 -VPLNTST-LVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDK 181
+ L+T+ +RG +G F + + LV+D + C K
Sbjct: 974 EIALHTNRQYMRGLVGCISHFT---LSTDYHIALVEDAVDGKNINTCGAK 1020
Score = 110 (43.8 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 34/129 (26%), Positives = 64/129 (49%)
Query: 17 YPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM 76
+P + + +F + + SE DG++ Y D D++++ + G + + F+CGSG
Sbjct: 625 WPLEPRHYLSFMEFEMTFRPDSE-DGVLLYSYDTGSKDFLSITMAGGHVEFRFDCGSGTG 683
Query: 77 ALSSGDKLILDGEWHTVE-FSRQQLSGKLKI---DGQVVAEGESKGSSKTLNIFGPFYLG 132
L S + L G+ H ++ S+ SG L + + Q+V E + G L++ Y+
Sbjct: 684 VLRSQTAITL-GKDHNIKKISQTAKSGLLLLIWHNHQLVTESQKDGIFTFLSVNNIPYVE 742
Query: 133 GVPLNTSTL 141
+ LN +TL
Sbjct: 743 -IILNHNTL 750
Score = 95 (38.5 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 33/140 (23%), Positives = 60/140 (42%)
Query: 189 YNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-----SVHSKKDYFILQMIDGSVKA 243
Y++ +K V R M K K GLL+ + D+ L + DG++
Sbjct: 851 YDNPAILKRVSGSRSNAFMRFKTTAK----DGLLMWRGDSPMRPNSDFISLGLRDGALVF 906
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
+ + G G S + S F DG+WH + A++ + VD + G P +
Sbjct: 907 SYNLGSGVASILVNGS----FNDGRWHRVKAVRDGQSGKITVDDYGA-RTGKSPGMMRQL 961
Query: 304 DTNNAVFIGGHPFLSLSSKK 323
+ N A+++GG ++L + +
Sbjct: 962 NINGALYVGGMKEIALHTNR 981
Score = 58 (25.5 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 207 MELKMDVKPRNISGLLLSVHS--KKDYFILQMIDGSVKATVDNGKG 250
ME +M +P + G+LL + KD+ + M G V+ D G G
Sbjct: 636 MEFEMTFRPDSEDGVLLYSYDTGSKDFLSITMAGGHVEFRFDCGSG 681
>UNIPROTKB|F1LQ53 [details] [associations]
symbol:Agrn "Agrin" species:10116 "Rattus norvegicus"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0007213 "G-protein
coupled acetylcholine receptor signaling pathway" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 RGD:2067 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR008993 Pfam:PF00054 SMART:SM00274 SMART:SM00282
SUPFAM:SSF50242 PROSITE:PS50025 IPI:IPI00554123
Ensembl:ENSRNOT00000027404 ArrayExpress:F1LQ53 Uniprot:F1LQ53
Length = 963
Score = 207 (77.9 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 52/174 (29%), Positives = 87/174 (50%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG 72
S + +PT+ R + +++ + E +G++ Y + + D++AL + DG++ + F+ G
Sbjct: 299 SFLAFPTL--RAYHTLRLALEFRAL-ETEGLLLYNGNARGKDFLALALLDGRVQFRFDTG 355
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SGP L+S + G WH +E SR G L +DG+ GES + LN+ Y+G
Sbjct: 356 SGPAVLTSLVP-VEPGRWHRLELSRHWRQGTLSVDGETPVVGESPSGTDGLNLDTNLYVG 414
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ--DKHT----SSGVIPCSD 180
G+P +V + GC+R L NN+ ++ D SSGV C D
Sbjct: 415 GIPEEQVAMVLDRTSVGVGLKGCIRMLDINNQQLELSDWQRAAVQSSGVGECGD 468
Score = 150 (57.9 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 41/154 (26%), Positives = 74/154 (48%)
Query: 30 FSIDIKTTSEQDGIIFYVADV-KHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
F + ++T + Q G++ ++ + DY+AL + DG + S++ GS P+ L S K +
Sbjct: 811 FELSLRTEATQ-GLVLWIGKAAERADYMALAIVDGHLQLSYDLGSQPVVLRSTVK-VNTN 868
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLG 147
W + R+ G L++ + G S + L+ G +LGG+ L + G
Sbjct: 869 RWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYG 928
Query: 148 LNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC 178
FVGCLR++ ++ L++D T + PC
Sbjct: 929 TG--FVGCLRDVVVGHRQLHLLEDAVTKPELRPC 960
Score = 116 (45.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-DGQVVA 112
D+V+L + + + + ++ G G + S + + L G W V R G L++ DG V
Sbjct: 607 DFVSLALHNRHLEFCYDLGKGAAVIRSKEPIAL-GTWVRVFLERNGRKGALQVGDGPRVL 665
Query: 113 EGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR--NLKSNNKLVQD 168
GES LN+ P Y+GG P + S L RG ++ F G ++ +L+ + L Q+
Sbjct: 666 -GESPVPHTMLNLKEPLYIGGAP-DFSKLARG-AAVSSGFNGVIQLVSLRGHQLLTQE 720
Score = 75 (31.5 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 26/119 (21%), Positives = 53/119 (44%)
Query: 198 VEQFRVGREMELKMDVKPRNISGLLLSVHS---KKDYFILQMIDGSVKATVDNGKGPISA 254
+E + + ++ ++ GL+L + + DY L ++DG ++ + D G P+
Sbjct: 800 IESEKALQSNHFELSLRTEATQGLVLWIGKAAERADYMALAIVDGHLQLSYDLGSQPVVL 859
Query: 255 IYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
T +W I A + S+ V + G P G+++ DT+ A+++GG
Sbjct: 860 RSTVK----VNTNRWLRIRAHREHREGSLQVGN-EAPVTGSSPLGATQLDTDGALWLGG 913
Score = 68 (29.0 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 35/140 (25%), Positives = 56/140 (40%)
Query: 189 YNSGGYV--KGVEQFR--VGREMELKMDVKPRNISGLLL----SVHSKKDYFILQMIDGS 240
+N Y+ KG+ F +G +M L+M R SGLLL K D+ L + +
Sbjct: 558 FNGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRH 617
Query: 241 VKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKT--KNVISVAVDSMTTDKPGLGPP 298
++ D GKG +A+ +P G W + + K + V G P
Sbjct: 618 LEFCYDLGKG--AAVIRSKEPIAL--GTWVRVFLERNGRKGALQVGDGPRVL---GESPV 670
Query: 299 GSSETDTNNAVFIGGHPFLS 318
+ + ++IGG P S
Sbjct: 671 PHTMLNLKEPLYIGGAPDFS 690
>MGI|MGI:87961 [details] [associations]
symbol:Agrn "agrin" species:10090 "Mus musculus" [GO:0001932
"regulation of protein phosphorylation" evidence=ISO] [GO:0001934
"positive regulation of protein phosphorylation" evidence=IDA]
[GO:0002162 "dystroglycan binding" evidence=ISO] [GO:0005509
"calcium ion binding" evidence=ISO] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005615 "extracellular space" evidence=IDA;TAS] [GO:0007009
"plasma membrane organization" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=ISO;IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007416 "synapse
assembly" evidence=ISO] [GO:0007528 "neuromuscular junction
development" evidence=IGI] [GO:0008582 "regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] [GO:0010469 "regulation of receptor
activity" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030548 "acetylcholine receptor regulator
activity" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0032314 "regulation of Rac GTPase activity"
evidence=IDA] [GO:0032321 "positive regulation of Rho GTPase
activity" evidence=ISO] [GO:0043113 "receptor clustering"
evidence=IGI;ISO;IMP;IDA] [GO:0043525 "positive regulation of
neuron apoptotic process" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=IDA] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=ISO] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=IMP] Reactome:REACT_112621
InterPro:IPR000742 InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181
SMART:SM00280 MGI:MGI:87961 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045887 GO:GO:0045944
GO:GO:0007009 GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605
GO:GO:0043113 PROSITE:PS01186 Reactome:REACT_118324 GO:GO:0033691
GO:GO:0002162 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0005796 GO:GO:0045213 GO:GO:0001934
InterPro:IPR011497 EMBL:AL928667 EMBL:BC150703 IPI:IPI00378698
IPI:IPI00648938 IPI:IPI00874558 UniGene:Mm.273098 PDB:3PVE
PDBsum:3PVE ProteinModelPortal:A2ASQ1 SMR:A2ASQ1 STRING:A2ASQ1
PaxDb:A2ASQ1 PRIDE:A2ASQ1 Ensembl:ENSMUST00000071248
Ensembl:ENSMUST00000075787 Ensembl:ENSMUST00000105574
Ensembl:ENSMUST00000105575 UCSC:uc008wgf.1
GeneTree:ENSGT00530000063501 InParanoid:A2ASQ1
Reactome:REACT_115433 ChiTaRS:AGRN EvolutionaryTrace:A2ASQ1
Bgee:A2ASQ1 Genevestigator:A2ASQ1 Uniprot:A2ASQ1
Length = 1950
Score = 205 (77.2 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 51/175 (29%), Positives = 88/175 (50%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG 72
S + +PT+ R + +++ + E +G++ Y + + D++AL + DG + + F+ G
Sbjct: 1263 SFLAFPTL--RAYHTLRLALEFRAL-ETEGLLLYNGNARGKDFLALALLDGHVQFRFDTG 1319
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SGP L+S + G WH +E SR G L +DG+ GES + LN+ Y+G
Sbjct: 1320 SGPAVLTSLVP-VEPGRWHRLELSRHWRQGTLSVDGEAPVVGESPSGTDGLNLDTKLYVG 1378
Query: 133 GVPLN--TSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
G+P + L R ++G+ GC+R L NN+ ++ V+ S E G
Sbjct: 1379 GLPEEQVATVLDRTSVGIG--LKGCIRMLDINNQQLELSDWQRAVVQSSGVGECG 1431
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 43/154 (27%), Positives = 75/154 (48%)
Query: 30 FSIDIKTTSEQDGIIFYVADV-KHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
F + ++T + Q G++ ++ V + DY+AL + DG + S++ GS P+ L S K +
Sbjct: 1798 FELSLRTEATQ-GLVLWIGKVGERADYMALAIVDGHLQLSYDLGSQPVVLRSTVK-VNTN 1855
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLG 147
W V R+ G L++ + G S + L+ G +LGG+ L + G
Sbjct: 1856 RWLRVRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYG 1915
Query: 148 LNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC 178
FVGCLR++ ++ L++D T + PC
Sbjct: 1916 TG--FVGCLRDVVVGHRQLHLLEDAVTKPELRPC 1947
Score = 110 (43.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-DGQVVA 112
D+V+L + + + + ++ G G + S + + L G W V R G L++ DG V
Sbjct: 1571 DFVSLALHNRHLEFRYDLGKGAAIIRSKEPIAL-GTWVRVFLERNGRKGALQVGDGPRVL 1629
Query: 113 EGESKGSSKT----LNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR--NLKSNNKLV 166
GES S K LN+ P Y+GG P + S L RG + F G ++ +L+ + L
Sbjct: 1630 -GESPKSRKVPHTMLNLKEPLYVGGAP-DFSKLARG-AAVASGFDGAIQLVSLRGHQLLT 1686
Query: 167 QD 168
Q+
Sbjct: 1687 QE 1688
Score = 76 (31.8 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 210 KMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCD 266
++ ++ GL+L V + DY L ++DG ++ + D G P+ T
Sbjct: 1799 ELSLRTEATQGLVLWIGKVGERADYMALAIVDGHLQLSYDLGSQPVVLRSTVK----VNT 1854
Query: 267 GQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
+W + A + S+ V + G P G+++ DT+ A+++GG
Sbjct: 1855 NRWLRVRAHREHREGSLQVGN-EAPVTGSSPLGATQLDTDGALWLGG 1900
Score = 65 (27.9 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 27/89 (30%), Positives = 40/89 (44%)
Query: 189 YNSGGYV--KGVEQFR--VGREMELKMDVKPRNISGLLL----SVHSKKDYFILQMIDGS 240
+N Y+ KG+ F +G +M L+M R SGLLL K D+ L + +
Sbjct: 1522 FNGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRH 1581
Query: 241 VKATVDNGKGPISAIYTPSDPYFFCDGQW 269
++ D GKG +AI +P G W
Sbjct: 1582 LEFRYDLGKG--AAIIRSKEPIAL--GTW 1606
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 189 (71.6 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 57/172 (33%), Positives = 84/172 (48%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQ-DGIIFYVADVKHI--DYVALYVKDGQIHYSF 69
S + PTI +K FSI I + DG+I Y K D+++ + G+ + F
Sbjct: 2711 SYLTLPTIKNSYKA---FSIKITFRPDNVDGMIIYNGQKKTTGADFISFGLLGGRPEFRF 2767
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GSG + + L GE+HTV R Q G L +DGQ G S+G K L++
Sbjct: 2768 DVGSGMATIRYPTPIKL-GEFHTVHLYRNQTQGSLVVDGQAPVNGTSQGKFKGLDLNEEL 2826
Query: 130 YLGGVPLNTSTLVRGNLGLNDTFVGCLRNL--KSNNKLVQDKHTSS-GVIPC 178
++GG P N S L + GL FVGC++ L + + + +D SS GV C
Sbjct: 2827 FVGGYP-NYSMLAK-TAGLKTGFVGCIKQLIIQGDEVIFKDLDKSSTGVSNC 2876
Score = 176 (67.0 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 50/175 (28%), Positives = 81/175 (46%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVAD--VKHIDYVALYVKDGQIHYS 68
+ S I YP +T N ++ K + DG++F+ +K D+VA+ + +G + +
Sbjct: 2966 EDSYIAYPPLTN-IHNDLRIEMEFKPM-DPDGLMFFSGGKKMKVEDFVAVSMVNGHVEFR 3023
Query: 69 FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGP 128
+ G+G L S + + LD +WH V R G L +D S G ++ LNI P
Sbjct: 3024 YELGTGQAVLRSQEPVSLD-QWHRVVAERLNKDGSLTVDHAKEITRSSPGKAQGLNIHTP 3082
Query: 129 FYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT---SSGVIPCSD 180
YLGGVP N+ + F GC+ + N K V ++ S + C+D
Sbjct: 3083 MYLGGVPSMDILPKPANVSM--LFDGCIGEVFINGKKVDLSYSFTESRAISQCND 3135
Score = 174 (66.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 46/137 (33%), Positives = 73/137 (53%)
Query: 32 IDIKTTSEQDGIIFY----VADV-KHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLIL 86
++I T S+ DG+I + + D K D+++L +++G + +S+ GSG + SG+ +
Sbjct: 3263 LEINTASK-DGLILWQGVELGDQGKGKDFISLGLQNGHLVFSYQLGSGEAQIVSGEP-VN 3320
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
D +WH + R G L+IDG V G+S+G S +N G YLGG P + L G
Sbjct: 3321 DRQWHKITAVRTGKHGYLQIDGGSVQRGQSQGKSIMVNTKGNIYLGGAP-DMQALTGGKY 3379
Query: 147 GLNDTFVGCLRNLKSNN 163
T GC++NL N
Sbjct: 3380 SSGMT--GCVKNLSLMN 3394
Score = 99 (39.9 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 34/151 (22%), Positives = 65/151 (43%)
Query: 178 CSDKTE-SGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK----DYF 232
C D T + F Y+ + ++ ++M+ KP + GL+ KK D+
Sbjct: 2952 CMDGTLITTPLFDGEDSYIAYPPLTNIHNDLRIEMEFKPMDPDGLMFFSGGKKMKVEDFV 3011
Query: 233 ILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDK 292
+ M++G V+ + G G A+ +P QWH +VA + S+ VD +
Sbjct: 3012 AVSMVNGHVEFRYELGTG--QAVLRSQEPVSL--DQWHRVVAERLNKDGSLTVDH--AKE 3065
Query: 293 PGLGPPGSSE-TDTNNAVFIGGHPFLSLSSK 322
PG ++ + + +++GG P + + K
Sbjct: 3066 ITRSSPGKAQGLNIHTPMYLGGVPSMDILPK 3096
Score = 75 (31.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 35/139 (25%), Positives = 62/139 (44%)
Query: 206 EMELKMDVKPRNI--SGLLLSVHSK-KDYFILQMIDGSVKATVDNGKGPISAIYTPSDPY 262
E+E+ K I G+ L K KD+ L + +G + + G G + +P
Sbjct: 3262 ELEINTASKDGLILWQGVELGDQGKGKDFISLGLQNGHLVFSYQLGSGEAQIV--SGEPV 3319
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFL-SLSS 321
D QWH I A++T + +D + + G S +T +++GG P + +L+
Sbjct: 3320 N--DRQWHKITAVRTGKHGYLQIDGGSVQR-GQSQGKSIMVNTKGNIYLGGAPDMQALTG 3376
Query: 322 KK--SGPRTKRRSVFLINA 338
K SG +++ L+NA
Sbjct: 3377 GKYSSGMTGCVKNLSLMNA 3395
>RGD|2067 [details] [associations]
symbol:Agrn "agrin" species:10116 "Rattus norvegicus" [GO:0001932
"regulation of protein phosphorylation" evidence=IDA] [GO:0001934
"positive regulation of protein phosphorylation" evidence=ISO]
[GO:0002162 "dystroglycan binding" evidence=IDA] [GO:0005509 "calcium
ion binding" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005578 "proteinaceous extracellular matrix"
evidence=TAS] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=ISO;ISS] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0007416 "synapse assembly" evidence=IMP] [GO:0007528
"neuromuscular junction development" evidence=ISO;TAS] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0010469
"regulation of receptor activity" evidence=ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030548 "acetylcholine receptor regulator activity" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0032314
"regulation of Rac GTPase activity" evidence=ISO] [GO:0032321
"positive regulation of Rho GTPase activity" evidence=IDA]
[GO:0033691 "sialic acid binding" evidence=ISS] [GO:0035374
"chondroitin sulfate binding" evidence=ISS] [GO:0043113 "receptor
clustering" evidence=ISO;ISS;IDA] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=ISS] [GO:0043525 "positive regulation
of neuron apoptotic process" evidence=ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=ISO] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IDA] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=ISO] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050 Pfam:PF07648
PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181 SMART:SM00280 RGD:2067
GO:GO:0005615 GO:GO:0009986 GO:GO:0043525 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0045202 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
GO:GO:0005605 GO:GO:0043113 PROSITE:PS01186 GO:GO:0033691
GO:GO:0002162 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 GO:GO:0030548 GO:GO:0035374
GO:GO:0043395 GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 EMBL:M64780
EMBL:S44194 IPI:IPI00188885 IPI:IPI00231249 IPI:IPI00231250
IPI:IPI00231251 IPI:IPI00231252 PIR:JH0399 RefSeq:NP_786930.1
UniGene:Rn.2163 PDB:3V64 PDB:3V65 PDBsum:3V64 PDBsum:3V65
ProteinModelPortal:P25304 SMR:P25304 IntAct:P25304 STRING:P25304
PRIDE:P25304 GeneID:25592 KEGG:rno:25592 InParanoid:P25304
NextBio:607271 ArrayExpress:P25304 Genevestigator:P25304
GermOnline:ENSRNOG00000020205 GO:GO:0001932 Uniprot:P25304
Length = 1959
Score = 207 (77.9 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 52/174 (29%), Positives = 87/174 (50%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG 72
S + +PT+ R + +++ + E +G++ Y + + D++AL + DG++ + F+ G
Sbjct: 1272 SFLAFPTL--RAYHTLRLALEFRAL-ETEGLLLYNGNARGKDFLALALLDGRVQFRFDTG 1328
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SGP L+S + G WH +E SR G L +DG+ GES + LN+ Y+G
Sbjct: 1329 SGPAVLTSLVP-VEPGRWHRLELSRHWRQGTLSVDGETPVVGESPSGTDGLNLDTNLYVG 1387
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ--DKHT----SSGVIPCSD 180
G+P +V + GC+R L NN+ ++ D SSGV C D
Sbjct: 1388 GIPEEQVAMVLDRTSVGVGLKGCIRMLDINNQQLELSDWQRAAVQSSGVGECGD 1441
Score = 150 (57.9 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 41/154 (26%), Positives = 74/154 (48%)
Query: 30 FSIDIKTTSEQDGIIFYVADV-KHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
F + ++T + Q G++ ++ + DY+AL + DG + S++ GS P+ L S K +
Sbjct: 1807 FELSLRTEATQ-GLVLWIGKAAERADYMALAIVDGHLQLSYDLGSQPVVLRSTVK-VNTN 1864
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLG 147
W + R+ G L++ + G S + L+ G +LGG+ L + G
Sbjct: 1865 RWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYG 1924
Query: 148 LNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC 178
FVGCLR++ ++ L++D T + PC
Sbjct: 1925 TG--FVGCLRDVVVGHRQLHLLEDAVTKPELRPC 1956
Score = 115 (45.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-DGQVVA 112
D+V+L + + + + ++ G G + S + + L G W V R G L++ DG V
Sbjct: 1580 DFVSLALHNRHLEFCYDLGKGAAVIRSKEPIAL-GTWVRVFLERNGRKGALQVGDGPRVL 1638
Query: 113 EGESKGSSKT----LNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR--NLKSNNKLV 166
GES S K LN+ P Y+GG P + S L RG ++ F G ++ +L+ + L
Sbjct: 1639 -GESPKSRKVPHTMLNLKEPLYIGGAP-DFSKLARG-AAVSSGFSGVIQLVSLRGHQLLT 1695
Query: 167 QD 168
Q+
Sbjct: 1696 QE 1697
Score = 73 (30.8 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 210 KMDVKPRNISGLLLSVHS---KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCD 266
++ ++ GL+L + + DY L ++DG ++ + D G P+ T
Sbjct: 1808 ELSLRTEATQGLVLWIGKAAERADYMALAIVDGHLQLSYDLGSQPVVLRSTVK----VNT 1863
Query: 267 GQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
+W I A + S+ V + G P G+++ DT+ A+++GG
Sbjct: 1864 NRWLRIRAHREHREGSLQVGN-EAPVTGSSPLGATQLDTDGALWLGG 1909
Score = 64 (27.6 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 189 YNSGGYV--KGVEQFR--VGREMELKMDVKPRNISGLLL----SVHSKKDYFILQMIDGS 240
+N Y+ KG+ F +G +M L+M R SGLLL K D+ L + +
Sbjct: 1531 FNGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRH 1590
Query: 241 VKATVDNGKGPISAIYTPSDPYFFCDGQW 269
++ D GKG +A+ +P G W
Sbjct: 1591 LEFCYDLGKG--AAVIRSKEPIAL--GTW 1615
>UNIPROTKB|O00468 [details] [associations]
symbol:AGRN "Agrin" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0043236 "laminin binding" evidence=TAS]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=TAS] [GO:0045162 "clustering of voltage-gated
sodium channels" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043113 "receptor clustering" evidence=IDA;IMP]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0050808 "synapse organization"
evidence=TAS] [GO:0005200 "structural constituent of cytoskeleton"
evidence=TAS] [GO:0031012 "extracellular matrix" evidence=IDA;TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0045202 "synapse"
evidence=ISS] [GO:0045887 "positive regulation of synaptic growth
at neuromuscular junction" evidence=ISS] [GO:0032321 "positive
regulation of Rho GTPase activity" evidence=ISS] [GO:0051491
"positive regulation of filopodium assembly" evidence=ISS]
[GO:0035374 "chondroitin sulfate binding" evidence=ISS] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISS] [GO:0005509
"calcium ion binding" evidence=ISS] [GO:0033691 "sialic acid
binding" evidence=ISS] [GO:0002162 "dystroglycan binding"
evidence=ISS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0006024 "glycosaminoglycan biosynthetic
process" evidence=TAS] [GO:0006027 "glycosaminoglycan catabolic
process" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0030204 "chondroitin sulfate metabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000742 InterPro:IPR002350 InterPro:IPR004850
Pfam:PF00008 Pfam:PF00050 Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026
PROSITE:PS51121 PROSITE:PS51465 SMART:SM00181 SMART:SM00280
GO:GO:0005886 Reactome:REACT_111045 Reactome:REACT_116125
GO:GO:0007411 GO:GO:0005615 GO:GO:0009986 GO:GO:0043525
GO:GO:0005200 GO:GO:0005975 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0050808 GO:GO:0045202
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605 GO:GO:0043236
GO:GO:0043113 Orphanet:98913 GO:GO:0007213 PROSITE:PS01186
GO:GO:0033691 GO:GO:0043202 GO:GO:0002162 CTD:375790
eggNOG:NOG312635 HOGENOM:HOG000033860 HOVERGEN:HBG080471 KO:K06254
OrthoDB:EOG4HQDHD GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 EMBL:U84406 EMBL:AB191264
EMBL:AL645608 EMBL:AF016903 EMBL:BC004220 EMBL:BC007649
EMBL:BC034009 EMBL:BC063620 IPI:IPI00374563 RefSeq:NP_940978.2
UniGene:Hs.273330 ProteinModelPortal:O00468 SMR:O00468
IntAct:O00468 MINT:MINT-4053526 STRING:O00468 PhosphoSite:O00468
PaxDb:O00468 PRIDE:O00468 Ensembl:ENST00000379370 GeneID:375790
KEGG:hsa:375790 UCSC:uc001ack.2 GeneCards:GC01P000946 HGNC:HGNC:329
HPA:HPA040090 MIM:103320 MIM:254300 neXtProt:NX_O00468
PharmGKB:PA24626 InParanoid:O00468 OMA:TNRWLRV GenomeRNAi:375790
NextBio:100617 ArrayExpress:O00468 Bgee:O00468 CleanEx:HS_AGRN
Genevestigator:O00468 GermOnline:ENSG00000188157 GO:GO:0005796
GO:GO:0030204 GO:GO:0045162 GO:GO:0006024 GO:GO:0006027
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 Uniprot:O00468
Length = 2067
Score = 193 (73.0 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 44/155 (28%), Positives = 80/155 (51%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG 72
S + +PT+ R + +++ + Q G++ Y + + D++AL + DG++ F+ G
Sbjct: 1381 SFLAFPTL--RAYHTLRLALEFRALEPQ-GLLLYNGNARGKDFLALALLDGRVQLRFDTG 1437
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SGP L+S + G+WH +E SR G L +DG+ GES + LN+ ++G
Sbjct: 1438 SGPAVLTSAVP-VEPGQWHRLELSRHWRRGTLSVDGETPVLGESPSGTDGLNLDTDLFVG 1496
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167
GVP + + + + GC+R L NN+ ++
Sbjct: 1497 GVPEDQAAVALERTFVGAGLRGCIRLLDVNNQRLE 1531
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
F + ++T + Q +++ + DYVAL + DG + S+N GS P+ L S +
Sbjct: 1915 FELSLRTEATQGLVLWSGKATERADYVALAIVDGHLQLSYNLGSQPVVLRSTVP-VNTNR 1973
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLGL 148
W V R+Q G L++ + G S + L+ G +LGG+P L + G
Sbjct: 1974 WLRVVAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLPELPVGPALPKAYGT 2033
Query: 149 NDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC 178
FVGCLR++ L++D T + PC
Sbjct: 2034 G--FVGCLRDVVVGRHPLHLLEDAVTKPELRPC 2064
Score = 117 (46.2 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 36/123 (29%), Positives = 61/123 (49%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-DGQVVA 112
D+V+L ++D ++ + ++ G G + S + + L G W V R G L++ DG V
Sbjct: 1689 DFVSLALRDRRLEFRYDLGKGAAVIRSREPVTL-GAWTRVSLERNGRKGALRVGDGPRVL 1747
Query: 113 EGESKGSSKT----LNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLK-SNNKLVQ 167
GES S K LN+ P Y+GG P + S L R ++ F G ++ + +L+
Sbjct: 1748 -GESPKSRKVPHTVLNLKEPLYVGGAP-DFSKLARA-AAVSSGFDGAIQLVSLGGRQLLT 1804
Query: 168 DKH 170
+H
Sbjct: 1805 PEH 1807
Score = 83 (34.3 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 26/111 (23%), Positives = 54/111 (48%)
Query: 210 KMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCD 266
++ ++ GL+L + DY L ++DG ++ + + G P+ + + P
Sbjct: 1916 ELSLRTEATQGLVLWSGKATERADYVALAIVDGHLQLSYNLGSQPV--VLRSTVPVN--T 1971
Query: 267 GQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFL 317
+W +VA + + S+ V + G P G+++ DT+ A+++GG P L
Sbjct: 1972 NRWLRVVAHREQREGSLQVGN-EAPVTGSSPLGATQLDTDGALWLGGLPEL 2021
Score = 65 (27.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 30/108 (27%), Positives = 50/108 (46%)
Query: 179 SDKTESGVFFYNSGGY----VKGVEQFR--VGREMELKMDVKPRNISGLLL----SVHSK 228
S + SG F + G+ ++G+ F +G +M L++ R SGLLL K
Sbjct: 1628 SGQDGSGPFLADFNGFSHLELRGLHTFARDLGEKMALEVVFLARGPSGLLLYNGQKTDGK 1687
Query: 229 KDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK 276
D+ L + D ++ D GKG +A+ +P G W T V+++
Sbjct: 1688 GDFVSLALRDRRLEFRYDLGKG--AAVIRSREPVTL--GAW-TRVSLE 1730
>UNIPROTKB|F1MSI2 [details] [associations]
symbol:AGRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043113 "receptor clustering" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0043236 "laminin binding"
evidence=IEA] [GO:0007213 "G-protein coupled acetylcholine receptor
signaling pathway" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045944 GO:GO:0007009
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 GO:GO:0030548 GO:GO:2000541 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV GO:GO:0045213
GO:GO:0001934 InterPro:IPR011497 GeneTree:ENSGT00530000063501
GO:GO:0008582 EMBL:DAAA02043249 IPI:IPI00708223
Ensembl:ENSBTAT00000017563 Uniprot:F1MSI2
Length = 2032
Score = 196 (74.1 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 49/174 (28%), Positives = 88/174 (50%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG 72
S + +PT+ R + +++ + Q G++ Y + + D++ L + G++ + F+ G
Sbjct: 1368 SFLAFPTL--RAYHTLRLALEFRALEPQ-GLLLYNGNARGKDFLGLVLLGGRVQFRFDTG 1424
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SGP L+S + G WH +E SR G L +DG+ G+S + LN+ ++G
Sbjct: 1425 SGPAVLTSSVP-VQPGRWHHLELSRHWRQGTLSVDGETPVLGQSPSGTDGLNLDTDLFVG 1483
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ-----DKHT-SSGVIPCSD 180
GVP + ++ V ++ GC+R L NN+ ++ + T SSGV C D
Sbjct: 1484 GVPEDQASTVLERTSVSIGLRGCIRLLDVNNQRLELSSWPESATRSSGVGKCGD 1537
Score = 149 (57.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 41/153 (26%), Positives = 73/153 (47%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
F + ++T + Q +++ + DY+AL + DG++ +++ GS P+ L S +
Sbjct: 1880 FELSLRTEATQGLVLWSGKATERADYIALAIVDGRLQLAYDLGSQPVVLRSTVP-VNTNR 1938
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLGL 148
W V R+Q G L++ + G S + L+ G +LGG+ L T + G
Sbjct: 1939 WLRVRAHRKQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLEKLPTGQALPKAYGT 1998
Query: 149 NDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC 178
FVGCLR++ + L++D T + PC
Sbjct: 1999 G--FVGCLRDVVVGQRPVHLLEDAITKPELRPC 2029
Score = 113 (44.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 31/112 (27%), Positives = 55/112 (49%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-DGQVVA 112
D+V+L + +G + + ++ G G + S + + L G W V R G +++ DG V
Sbjct: 1676 DFVSLALHNGLLEFRYDLGKGAAVIRSKEPVAL-GAWTRVSLERNGRKGAMRVGDGPRVL 1734
Query: 113 EGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
GES LN+ P ++GG P + S L R ++ F G ++ + N +
Sbjct: 1735 -GESPVPHTVLNLKEPLFVGGAP-DFSKLARA-AAVSSGFDGAIQLVSLNGR 1783
Score = 78 (32.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 27/124 (21%), Positives = 56/124 (45%)
Query: 194 YVKGV-EQFRVGREMELKMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGK 249
Y+ V E + + ++ ++ GL+L + DY L ++DG ++ D G
Sbjct: 1864 YLNAVTESEKALQSNHFELSLRTEATQGLVLWSGKATERADYIALAIVDGRLQLAYDLGS 1923
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAV 309
P+ + + P +W + A + + S+ V + G P G+++ DT+ A+
Sbjct: 1924 QPV--VLRSTVPVN--TNRWLRVRAHRKQREGSLQVGN-EAPVTGSSPLGATQLDTDGAL 1978
Query: 310 FIGG 313
++GG
Sbjct: 1979 WLGG 1982
Score = 77 (32.2 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 39/141 (27%), Positives = 65/141 (46%)
Query: 189 YNSGGYV--KGVEQFR--VGREMELKMDVKPRNISGLLL----SVHSKKDYFILQMIDGS 240
++S Y+ KG+ F +G +M L++ R+ SGLLL K D+ L + +G
Sbjct: 1627 FSSFSYLELKGLHTFERDLGEKMALEVVFLARSPSGLLLYNGQKTDGKGDFVSLALHNGL 1686
Query: 241 VKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKP---GLGP 297
++ D GKG +A+ +P G W T V+++ +N A+ D P G P
Sbjct: 1687 LEFRYDLGKG--AAVIRSKEPVAL--GAW-TRVSLE-RNGRKGAM--RVGDGPRVLGESP 1738
Query: 298 PGSSETDTNNAVFIGGHPFLS 318
+ + +F+GG P S
Sbjct: 1739 VPHTVLNLKEPLFVGGAPDFS 1759
>UNIPROTKB|O15230 [details] [associations]
symbol:LAMA5 "Laminin subunit alpha-5" species:9606 "Homo
sapiens" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0090002 "establishment of protein
localization to plasma membrane" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0016477 "cell
migration" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0005605 "basal lamina" evidence=NAS] [GO:0048041 "focal
adhesion assembly" evidence=NAS] [GO:0009790 "embryo development"
evidence=NAS] [GO:0045446 "endothelial cell differentiation"
evidence=NAS] [GO:0008037 "cell recognition" evidence=NAS]
[GO:0001525 "angiogenesis" evidence=NAS] [GO:0005178 "integrin
binding" evidence=IDA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=NAS] [GO:0043259 "laminin-10 complex" evidence=IDA;TAS]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0043260 "laminin-11 complex" evidence=TAS]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IDA] InterPro:IPR001368 InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0007010
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0005198
GO:GO:0030324 GO:GO:0008283 GO:GO:0001755 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009790 GO:GO:0030334 GO:GO:0001942
GO:GO:0007517 GO:GO:0048041 GO:GO:0005178 PROSITE:PS01186
GO:GO:0007229 GO:GO:0042475 EMBL:AL354836 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384
GO:GO:0001738 GO:GO:0034446 GO:GO:0090002
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0016331
GO:GO:0001658 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
Pathway_Interaction_DB:syndecan_1_pathway GO:GO:0060445
Pfam:PF02210 GO:GO:0008037 DrugBank:DB00015 GO:GO:0045995
GO:GO:0045446 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
EMBL:AF443072 EMBL:AB067494 EMBL:AB011105 EMBL:Z95636
IPI:IPI00783665 RefSeq:NP_005551.3 UniGene:Hs.473256
ProteinModelPortal:O15230 SMR:O15230 IntAct:O15230
MINT:MINT-1183475 STRING:O15230 PhosphoSite:O15230 PaxDb:O15230
PRIDE:O15230 DNASU:3911 Ensembl:ENST00000252999 GeneID:3911
KEGG:hsa:3911 UCSC:uc002ycq.3 CTD:3911 GeneCards:GC20M060883
H-InvDB:HIX0015978 HGNC:HGNC:6485 MIM:601033 neXtProt:NX_O15230
PharmGKB:PA30274 InParanoid:O15230 OMA:LRHTTGP OrthoDB:EOG4VHK5G
ChiTaRS:LAMA5 GenomeRNAi:3911 NextBio:15363 ArrayExpress:O15230
Bgee:O15230 CleanEx:HS_LAMA5 Genevestigator:O15230
GermOnline:ENSG00000130702 GO:GO:0043259 GO:GO:0043260
Uniprot:O15230
Length = 3695
Score = 225 (84.3 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 77/317 (24%), Positives = 143/317 (45%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKH-IDYVALYVKDGQIH 66
G S SS +E+ I R +N S+ + S + G++ + A ++ +AL++ +G
Sbjct: 3344 GGSLSSHLEFVGILARHRNWPSLSMHVLPRSSR-GLLLFTARLRPGSPSLALFLSNGHFV 3402
Query: 67 YSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVV--AEG---ESKGSSK 121
G G + + G WH V ++ L DG EG + +G+
Sbjct: 3403 AQME-GLGTRLRAQSRQRSRPGRWHKVSVRWEKNRILLVTDGARAWSQEGPHRQHQGAEH 3461
Query: 122 TLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCS-D 180
++GG+P ++ + L + F GC++ L+ + + + +GV PC
Sbjct: 3462 PQP--HTLFVGGLPASSHS---SKLPVTVGFSGCVKRLRLHGRPLGAPTRMAGVTPCILG 3516
Query: 181 KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKD--YFILQMID 238
E+G+FF SGG + ++ L+++V+P ++GL+ + + Y LQ+ +
Sbjct: 3517 PLEAGLFFPGSGGVITLDLPGATLPDVGLELEVRPLAVTGLIFHLGQARTPPYLQLQVTE 3576
Query: 239 GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPP 298
V D+G G S T P CDGQWH + +K+ NV+ + VD+ + +GP
Sbjct: 3577 KQVLLRADDGAGEFSTSVTR--PSVLCDGQWHRLAVMKSGNVLRLEVDAQSNHT--VGPL 3632
Query: 299 GSSETDTNNAVFIGGHP 315
++ +++GG P
Sbjct: 3633 LAAAAGAPAPLYLGGLP 3649
>UNIPROTKB|F1Q2Z6 [details] [associations]
symbol:AGRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043113 "receptor clustering" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043236 "laminin
binding" evidence=IEA] [GO:0007213 "G-protein coupled acetylcholine
receptor signaling pathway" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045944 GO:GO:0007009
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 CTD:375790 KO:K06254 GO:GO:0030548 GO:GO:2000541
GO:GO:0032314 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497
GeneTree:ENSGT00530000063501 GO:GO:0008582 EMBL:AAEX03003837
EMBL:AAEX03003838 RefSeq:XP_536713.3 Ensembl:ENSCAFT00000030741
GeneID:479574 KEGG:cfa:479574 Uniprot:F1Q2Z6
Length = 2046
Score = 194 (73.4 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 50/184 (27%), Positives = 90/184 (48%)
Query: 3 YYVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKD 62
Y + + S + +PT+ R + +++ + Q G++ Y + + D++AL +
Sbjct: 1372 YLSVPAFNGRSFLAFPTL--RAYHTLRLALEFRALEPQ-GLLLYNGNAQGKDFLALTLLG 1428
Query: 63 GQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKT 122
G++ F+ GSGP L+S I G WH +E SR G L +DG+ + G S +
Sbjct: 1429 GRVQLRFDTGSGPAVLTSSVP-IEPGRWHRLELSRHWRRGTLSVDGEPLVLGHSPSGTDG 1487
Query: 123 LNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKH------TSSGVI 176
LN+ ++GG+P + +++V ++ GC+R L NN+ ++ SSGV
Sbjct: 1488 LNLDTDLFVGGIPEDQASVVLERTSISVGLKGCIRLLDVNNQRLELSSWPGAAARSSGVG 1547
Query: 177 PCSD 180
C D
Sbjct: 1548 ECGD 1551
Score = 146 (56.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 41/154 (26%), Positives = 73/154 (47%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
F + ++T + Q +++ + DYVAL + DG++ +++ GS P+ L S +
Sbjct: 1894 FELSLRTEATQGLVLWSGKATERADYVALAIVDGRLQLTYDLGSQPVVLRSTVP-VNTNR 1952
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLGL 148
W V R+Q G L++ + G S + L+ G +LGG+ L + G
Sbjct: 1953 WLRVRAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGTLWLGGLEKLPIGQALPKAYGT 2012
Query: 149 NDTFVGCLRNLKSNNK---LVQDKHTSSGVIPCS 179
FVGCLR++ + L++D T + PC+
Sbjct: 2013 G--FVGCLRDVVVGQRPLHLLEDAVTKPELRPCA 2044
Score = 112 (44.5 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 35/118 (29%), Positives = 57/118 (48%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-DGQVVA 112
D+V+L + D + + ++ G G + S + + LD W V R G +++ DG V
Sbjct: 1690 DFVSLALHDRFLEFRYDLGKGAAVIRSKEPVALD-TWTRVSLERNGRKGAMRVSDGPRVL 1748
Query: 113 EGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR--NLKSNNKLVQD 168
GES LN+ P Y+GG P + S L R + F G ++ +LK + L Q+
Sbjct: 1749 -GESPVPHTVLNLKEPLYVGGAP-DFSKLARA-AAVFSGFDGAIQLVSLKGHQLLSQE 1803
Score = 78 (32.5 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 27/124 (21%), Positives = 56/124 (45%)
Query: 194 YVKGV-EQFRVGREMELKMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGK 249
Y+ V E + + ++ ++ GL+L + DY L ++DG ++ T D G
Sbjct: 1878 YLNAVTESEKALQSNHFELSLRTEATQGLVLWSGKATERADYVALAIVDGRLQLTYDLGS 1937
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAV 309
P+ + + P +W + A + + S+ V + G P G+++ DT+ +
Sbjct: 1938 QPV--VLRSTVPVN--TNRWLRVRAHREQREGSLQVGN-EAPVTGSSPLGATQLDTDGTL 1992
Query: 310 FIGG 313
++GG
Sbjct: 1993 WLGG 1996
Score = 64 (27.6 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 38/153 (24%), Positives = 67/153 (43%)
Query: 179 SDKTESGVFFYNSGGY----VKGVEQFR--VGREMELKMDVKPRNISGLLL----SVHSK 228
S++ S F + G+ +KG+ F +G ++ L++ R SGLLL K
Sbjct: 1629 SERDSSQPFLADFHGFSYLELKGLHTFERDLGEKLALEVVFLARGPSGLLLYNGQKTDGK 1688
Query: 229 KDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSM 288
D+ L + D ++ D GKG +A+ +P W T V+++ +N A+
Sbjct: 1689 GDFVSLALHDRFLEFRYDLGKG--AAVIRSKEPVAL--DTW-TRVSLE-RNGRKGAM--R 1740
Query: 289 TTDKP---GLGPPGSSETDTNNAVFIGGHPFLS 318
+D P G P + + +++GG P S
Sbjct: 1741 VSDGPRVLGESPVPHTVLNLKEPLYVGGAPDFS 1773
>UNIPROTKB|F1NAT6 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR000742 InterPro:IPR007110 Pfam:PF00008
PROSITE:PS50026 PROSITE:PS50835 SMART:SM00181 GO:GO:0005615
GO:GO:0008104 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 GO:GO:0030198 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
Pfam:PF02210 EMBL:AADN02073465 IPI:IPI00577494
Ensembl:ENSGALT00000016492 OMA:MEVELEC Uniprot:F1NAT6
Length = 1213
Score = 183 (69.5 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 50/156 (32%), Positives = 78/156 (50%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKH--IDYVALYVKDGQIHYSFN 70
S + PTI +K F+ I + + DG++ Y K D+++ + G+ + F+
Sbjct: 699 SFLPLPTIKDAYKT-FEIQITFRPDAA-DGMLLYNGQRKSSGADFISFGLVGGRPEFRFD 756
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFY 130
GSG + L L G++HTV R G L++DGQ G S+G + L++ Y
Sbjct: 757 AGSGMATIRDPTPLRL-GQYHTVRLFRNLTRGSLQVDGQPPVNGTSQGKFQGLDLNEELY 815
Query: 131 LGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV 166
LGG P T+V GL+ FVGC+R L+ N+ V
Sbjct: 816 LGGYP--DYTIV-AKTGLSRGFVGCVRQLRIQNEEV 848
Score = 165 (63.1 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 47/149 (31%), Positives = 69/149 (46%)
Query: 41 DGIIFYVAD-VKHI-DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQ 98
DG++ + A + D+VAL + G + + + GSG L S + + L G WH V R
Sbjct: 981 DGLLLFSAGKASPVEDFVALAMVSGHLEFHYELGSGTAVLRSVEPVAL-GRWHRVTAERV 1039
Query: 99 QLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGV--PLNTSTLVRGNLGLNDTFVGCL 156
G + +DG + S G S+ LN+ P YLGGV PL T N +F GC+
Sbjct: 1040 HKDGTMTVDGGAPVQRSSPGKSQGLNLRSPLYLGGVEPPLRPPT--------NASFQGCI 1091
Query: 157 RNLKSNNKLVQDKHT---SSGVIPCSDKT 182
+ N K V ++ S GV C +
Sbjct: 1092 GEVSINGKKVDLSYSFLRSRGVGQCGQSS 1120
Score = 85 (35.0 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 188 FYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK----KDYFILQMIDGSVKA 243
F +G ++ V E+ ++ + PR GLLL K +D+ L M+ G ++
Sbjct: 950 FDEAGAFISYPPLTNVHHELRVEAEFLPRAPDGLLLFSAGKASPVEDFVALAMVSGHLEF 1009
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSE- 302
+ G G +A+ +P G+WH + A + ++ VD + PG S+
Sbjct: 1010 HYELGSG--TAVLRSVEPVAL--GRWHRVTAERVHKDGTMTVDGGAPVQRS--SPGKSQG 1063
Query: 303 TDTNNAVFIGG 313
+ + +++GG
Sbjct: 1064 LNLRSPLYLGG 1074
>UNIPROTKB|F1LWS0 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
InterPro:IPR000034 Pfam:PF00052 PROSITE:PS51115 GO:GO:0005606
IPI:IPI00566251 Ensembl:ENSRNOT00000051597 ArrayExpress:F1LWS0
Uniprot:F1LWS0
Length = 1728
Score = 219 (82.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 76/316 (24%), Positives = 144/316 (45%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK-HIDYVALYVKDGQIHYSFNC 71
S +++ ++ +N+ S+ ++ G++ YVA + H + L++ G+
Sbjct: 1356 SYLQFVGVSPSHRNRLHLSMLVRPHGASQGLLLYVAPLSSHSPSLVLFLNHGRFVAQTE- 1414
Query: 72 GSGPMALSSGDKLILDGEWH--TVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGP- 128
G GP + + G+WH +V + QQ+ +L +DG ++ + GP
Sbjct: 1415 GPGPQLQAQSRQHSRAGQWHRVSVRWGMQQV--QLVVDGSQTWSQKAP-HRRVHRAEGPQ 1471
Query: 129 ---FYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTES 184
++GG+P + + L ++ F GC++ L+ + + ++ GV PC S E
Sbjct: 1472 HYTLFVGGLPAGSYS---SKLPVSVGFSGCMKKLQLDKRPLRAPTRMVGVTPCVSGPLED 1528
Query: 185 GVFFYNSGGYVKGVEQFRVGR-EMELKMDVKPRNISGLLLSV---HSKKDYFILQMIDGS 240
G+FF S G V +E + + L+++V+P +GL+ + H+ Y LQ++
Sbjct: 1529 GLFFPGSEGAVT-LELPKAKMPHVSLELEVRPLAAAGLIFHLGQAHATP-YVQLQLLTEQ 1586
Query: 241 VKATVDNGKGPISAIYT-PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPG 299
V ++G G S T P CDGQWH + IK +N + + VD+ + G P
Sbjct: 1587 VLLRANDGAGEFSTWVTYPK----LCDGQWHQVTVIKGRNTLRLEVDTHSNHTTGRLP-- 1640
Query: 300 SSETDTNNAVFIGGHP 315
+ D+ + +G P
Sbjct: 1641 ETLADSPALLHLGSPP 1656
>FB|FBgn0261563 [details] [associations]
symbol:wb "wing blister" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=ISS;NAS;IDA]
[GO:0005604 "basement membrane" evidence=ISS] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007502 "digestive tract mesoderm development" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0008406
EMBL:AE014134 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007476 Pfam:PF02210 HSSP:P00740 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GO:GO:0007502 GO:GO:0005606 FlyBase:FBgn0261563
ChiTaRS:wb RefSeq:NP_723870.1 ProteinModelPortal:Q8IP51 SMR:Q8IP51
STRING:Q8IP51 PRIDE:Q8IP51 EnsemblMetazoa:FBtr0302731 GeneID:43946
KEGG:dme:Dmel_CG42677 UCSC:CG15288-RB CTD:43946 InParanoid:Q8IP51
OMA:CNCNAYG GenomeRNAi:43946 NextBio:836431 ArrayExpress:Q8IP51
Bgee:Q8IP51 Uniprot:Q8IP51
Length = 3375
Score = 219 (82.2 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 77/277 (27%), Positives = 127/277 (45%)
Query: 51 KHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQ 109
KH YVAL +KDGQ+ G L KL DGEWH V S + ++ G+
Sbjct: 3058 KH--YVALVLKDGQLVLVVR-GRRREELQLTAKLN-DGEWHRVTISCHDRKVTMSVEIGR 3113
Query: 110 VVAEGESKGS-SKTLNIFGPFYLGGVPLNTSTLVRGNLGLN-DTFVGCLRNLKSNNKLVQ 167
+ ++ K + +GG+P + V +L + + F GCLR + NN Q
Sbjct: 3114 TDQKTSAQMKLPKKIGASQLLLVGGLP-QSPVKVSSDLYVRLEPFKGCLRRVSINNN-TQ 3171
Query: 168 D-----KHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLL 222
D KH++ G C E G +F Y + F VG+ ++L+ + + +SG+L
Sbjct: 3172 DLARPGKHSNVG--QCFPTVERGSYFPGDA-YAIYKKNFNVGKYLDLETEFRTSELSGIL 3228
Query: 223 LSVHSKKDY--FILQMIDGSVKATVDNGKG-PISAIYTPSDPYFFCDGQWHTIVAIKTKN 279
LSV + L++ +G++ + D G G P+ + Y CD +WH I A+
Sbjct: 3229 LSVSDPNGFPALSLELHNGNIIFSCDPGNGAPMRVESSLPTKYALCDNKWHNISALYDGE 3288
Query: 280 VISVAVDSMTTDKPGLGPPGSS-ETDTNNAVFIGGHP 315
I + +D + +G G++ + T + ++IGG P
Sbjct: 3289 QIVLRIDQLPA-VISVGNQGNAGKVQTRSPLYIGGLP 3324
Score = 148 (57.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 78/321 (24%), Positives = 145/321 (45%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS-GPMALSSGDK 83
KN F + +T E + ++F D K+ V++ + G+I + + G + +++ K
Sbjct: 2607 KNLFSVQMTFRTLDE-NALLFLAVDDKNNRSVSVTLSRGRIMFRIDYGDESKLEINTTKK 2665
Query: 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESK--GSSKTL--NI-FGP------FYLG 132
+ G+W +E +R+ S K + ++ + + TL NI P +YLG
Sbjct: 2666 YNV-GQWIKIEAARE-FSAKRSTENGMLRVNNDRPISGAPTLPVNIHLLPDLSKTVYYLG 2723
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSS--GVIP-CSDK-TESGVFF 188
GVP ++ G ++ F+GC+++++ N + +SS GV P C + T++G
Sbjct: 2724 GVPPGFTSGTSKAPGADNPFLGCMKDVQVNGETYDPLESSSYYGVEPSCKNMITKAG--- 2780
Query: 189 YNSGGYVKGVEQ-FRVGREMELKM-DVKPRNISGL------LLSVHSKKDY---FILQMI 237
++ GY++ Q R L ++P + L +L + KD F + ++
Sbjct: 2781 FSGNGYLELPSQSLRKRSNTALVFRTLQPDCLLLLAAYPPEILGDYDAKDIKGNFSISLV 2840
Query: 238 DGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGL-G 296
DG + V++G+ S I S+ DG++H + IKT + + VD + L G
Sbjct: 2841 DGQLHVWVNSGR---SFIKMSSNSSQMNDGEFHVVHLIKTGRKLELMVDDELQEIRNLNG 2897
Query: 297 PPG--SSETDTNNAVFIGGHP 315
P S D ++IGG P
Sbjct: 2898 NPTVVSLPRDAGG-LYIGGAP 2917
Score = 138 (53.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 44/154 (28%), Positives = 82/154 (53%)
Query: 24 FKNKFDFS--IDIKT---TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSG-PMA 77
+K F+ +D++T TSE GI+ V+D ++L + +G I +S + G+G PM
Sbjct: 3203 YKKNFNVGKYLDLETEFRTSELSGILLSVSDPNGFPALSLELHNGNIIFSCDPGNGAPMR 3262
Query: 78 LSSG--DKLIL-DGEWHTVE--FSRQQLSGKLKIDG--QVVAEGESKGSSKTLNIFGPFY 130
+ S K L D +WH + + +Q+ L+ID V++ G ++G++ + P Y
Sbjct: 3263 VESSLPTKYALCDNKWHNISALYDGEQIV--LRIDQLPAVISVG-NQGNAGKVQTRSPLY 3319
Query: 131 LGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
+GG+P + + G+L + F GC+R++ N+
Sbjct: 3320 IGGLPESAPS---GSLISRENFKGCIRHVSIRNE 3350
>UNIPROTKB|F1MAN8 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 IPI:IPI00190577
Ensembl:ENSRNOT00000008981 ArrayExpress:F1MAN8 Uniprot:F1MAN8
Length = 3719
Score = 219 (82.2 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 76/316 (24%), Positives = 144/316 (45%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK-HIDYVALYVKDGQIHYSFNC 71
S +++ ++ +N+ S+ ++ G++ YVA + H + L++ G+
Sbjct: 3347 SYLQFVGVSPSHRNRLHLSMLVRPHGASQGLLLYVAPLSSHSPSLVLFLNHGRFVAQTE- 3405
Query: 72 GSGPMALSSGDKLILDGEWH--TVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGP- 128
G GP + + G+WH +V + QQ+ +L +DG ++ + GP
Sbjct: 3406 GPGPQLQAQSRQHSRAGQWHRVSVRWGMQQV--QLVVDGSQTWSQKAP-HRRVHRAEGPQ 3462
Query: 129 ---FYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTES 184
++GG+P + + L ++ F GC++ L+ + + ++ GV PC S E
Sbjct: 3463 HYTLFVGGLPAGSYS---SKLPVSVGFSGCMKKLQLDKRPLRAPTRMVGVTPCVSGPLED 3519
Query: 185 GVFFYNSGGYVKGVEQFRVGR-EMELKMDVKPRNISGLLLSV---HSKKDYFILQMIDGS 240
G+FF S G V +E + + L+++V+P +GL+ + H+ Y LQ++
Sbjct: 3520 GLFFPGSEGAVT-LELPKAKMPHVSLELEVRPLAAAGLIFHLGQAHATP-YVQLQLLTEQ 3577
Query: 241 VKATVDNGKGPISAIYT-PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPG 299
V ++G G S T P CDGQWH + IK +N + + VD+ + G P
Sbjct: 3578 VLLRANDGAGEFSTWVTYPK----LCDGQWHQVTVIKGRNTLRLEVDTHSNHTTGRLP-- 3631
Query: 300 SSETDTNNAVFIGGHP 315
+ D+ + +G P
Sbjct: 3632 ETLADSPALLHLGSPP 3647
>UNIPROTKB|F1MC13 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090002 "establishment of protein localization to
plasma membrane" evidence=IEA] [GO:0060445 "branching involved in
salivary gland morphogenesis" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005178 "integrin binding" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0045995 "regulation
of embryonic development" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 EMBL:DAAA02036259 EMBL:DAAA02036256
EMBL:DAAA02036257 EMBL:DAAA02036258 IPI:IPI00717460
Ensembl:ENSBTAT00000003981 Uniprot:F1MC13
Length = 3656
Score = 218 (81.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 68/252 (26%), Positives = 115/252 (45%)
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGP--- 128
G GP + G+WHTV ++ +L DG V A + + + GP
Sbjct: 3369 GPGPQLQVQSRQRSRTGQWHTVSVRWEKSRIQLMTDG-VWAHSQEEPGRQHQRQQGPRPH 3427
Query: 129 -FYLGGVPLNTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTESG 185
++GG+P + R + ++ F GC++ L+ + +L++ GV PC S E G
Sbjct: 3428 TLFVGGLPAGGHS-PRLPVAISSPEFRGCVKRLRLDGRLLRAPTRMVGVTPCFSGPLEKG 3486
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLL--LSVHSKKDYFILQMIDGSVKA 243
+FF SGG V ++ L+++V+P+ +GL+ L Y LQ++ V
Sbjct: 3487 LFFTGSGGTVTLDTLGATLPDVALELEVRPQTATGLVFHLGRGQTPPYLELQVLGKQVLL 3546
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
++G G S + T P CDG+WH + K NV+ + VD + G P ++
Sbjct: 3547 WANDGAGEFSTLVT--HPAALCDGRWHRLAVTKGGNVLRLEVDQQSNHTQGPAP--ATWA 3602
Query: 304 DTNNAVFIGGHP 315
+T + +GG P
Sbjct: 3603 NTLVPLHLGGLP 3614
>MGI|MGI:1341292 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10090 "Mus musculus" [GO:0001917 "photoreceptor inner
segment" evidence=ISO] [GO:0002141 "stereocilia ankle link"
evidence=NAS] [GO:0002142 "stereocilia ankle link complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=ISO;IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0017022 "myosin binding" evidence=IPI]
[GO:0032391 "photoreceptor connecting cilium" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045494 "photoreceptor cell maintenance"
evidence=ISO;IMP] [GO:0048496 "maintenance of organ identity"
evidence=ISO] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050953 "sensory perception of light stimulus" evidence=ISO]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
[GO:0060171 "stereocilium membrane" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1341292 GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113 Pfam:PF02210
GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0002142 GO:GO:0048496 GO:GO:0060171
GeneTree:ENSGT00700000104042 CTD:7399 eggNOG:NOG245744
HOGENOM:HOG000124780 HOVERGEN:HBG094138 OMA:EIRIQAC
OrthoDB:EOG4B5P57 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AF151717 EMBL:DQ073638 EMBL:AC121799 EMBL:AC121892
EMBL:AC122122 EMBL:AC129312 EMBL:AC135863 EMBL:AC165230
IPI:IPI00720231 IPI:IPI00742431 IPI:IPI01007786 RefSeq:NP_067383.3
UniGene:Mm.331238 ProteinModelPortal:Q2QI47 STRING:Q2QI47
PhosphoSite:Q2QI47 PRIDE:Q2QI47 Ensembl:ENSMUST00000060479
GeneID:22283 KEGG:mmu:22283 UCSC:uc007eae.1 UCSC:uc007eaf.1
ChiTaRS:USH2A NextBio:302411 Bgee:Q2QI47 Genevestigator:Q2QI47
GermOnline:ENSMUSG00000026609 Uniprot:Q2QI47
Length = 5193
Score = 219 (82.2 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 84/314 (26%), Positives = 142/314 (45%)
Query: 29 DFSIDIKT---TSEQDGIIFY-VADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD-- 82
DF I IK T +G+I ++ +Y L +K+G+ ++ +N + ++ D
Sbjct: 1531 DF-IGIKASFRTRVPEGLILLALSPGDQEEYFTLQLKNGRPYFLYNSQGTLVEVTPTDDP 1589
Query: 83 -KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGES-KGSSKTLNIFGPFYLGGVPLNTST 140
+ DGEWH + R Q G++ +DGQ S GSS T G F +GGVP S
Sbjct: 1590 SQGYRDGEWHEIIAVRHQAFGQITLDGQYTGSSSSLNGSSVTGGYTGLF-VGGVPQGHSV 1648
Query: 141 LVRGNLGLNDTFVGCLRNL-------KSNNKLVQDKHTSS---GVIP----CSDKTESGV 186
L + + FVGCL+++ S L D +S V P C E GV
Sbjct: 1649 LQKRLEIIQRGFVGCLKDVFIMKGYSPSGTWLPLDWQSSEEQVNVHPSWEGCPTNLEEGV 1708
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK--DYFILQMIDGSVKAT 244
F +G + F ++ E+ + + ++GLLL +H+ + D+ +++ G +
Sbjct: 1709 QFLGAGFLELPSDTFHAAKDFEISLKFQTDQLNGLLLFIHNTEGPDFLAVELKRGLLSFK 1768
Query: 245 VDNGKGPISAIYTPSDPYFF---CDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS 301
++ S ++T D CDG+W+T+ K +V+SV V+++ K G
Sbjct: 1769 FNS-----SLVFTRVDLRLGLADCDGKWNTVSIKKEGSVVSVRVNAL---KKSTSQAGGQ 1820
Query: 302 ETDTNNAVFIGGHP 315
N+ V++GG P
Sbjct: 1821 PLLVNSPVYLGGIP 1834
Score = 145 (56.1 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 77/321 (23%), Positives = 143/321 (44%)
Query: 15 IEYPTITGRFKNKFDFSIDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
+E P+ T F DF I +K ++Q +G++ ++ + + D++A+ +K G + + FN
Sbjct: 1716 LELPSDT--FHAAKDFEISLKFQTDQLNGLLLFIHNTEGPDFLAVELKRGLLSFKFNSS- 1772
Query: 74 GPMALSSGD-KLIL---DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ + D +L L DG+W+TV ++ ++++ + + S+ + L + P
Sbjct: 1773 --LVFTRVDLRLGLADCDGKWNTVSIKKEGSVVSVRVNA--LKKSTSQAGGQPLLVNSPV 1828
Query: 130 YLGGVPLNTSTLVRGNLGLNDTFVGCLRNLK-SNNKLVQDKHTSSGVIPCS-DKTESGVF 187
YLGG+P R +L L F GC++ + + +V SS + + D S
Sbjct: 1829 YLGGIPRELQDAYR-HLTLEPGFRGCVKEVAFARGVVVNLASVSSRAVRVNQDGCLSSDS 1887
Query: 188 FYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDN 247
N GG + +R ++ + ++P + L V + + + D S T+
Sbjct: 1888 TVNCGGN-DSILVYRGSQQSVYESGLQP--FTEYLYRVTASHEGGAVSS-DWSRGRTL-- 1941
Query: 248 GKGPISAIYTPSDPYFF----CDGQWHTIVAIK---TKNVISVAVDSMTTDKPGLGPPGS 300
G P S + TPS + W+ +K K V+ S + +P + P S
Sbjct: 1942 GTAPQS-VPTPSRAQSINGSSVEVAWNEPAVVKGVLEKYVLKAY--SEDSSQPRV-PSAS 1997
Query: 301 SE---TDTNNAVFIGGHPFLS 318
+E T T++ V IG HPF S
Sbjct: 1998 TELHDTSTHSGVLIGLHPFHS 2018
>FB|FBgn0034070 [details] [associations]
symbol:SP2353 "SP2353" species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005615
"extracellular space" evidence=ISS] [GO:0046716 "muscle cell
homeostasis" evidence=IGI;IMP] [GO:0042052 "rhabdomere development"
evidence=IMP] InterPro:IPR000742 Pfam:PF00008 PROSITE:PS50026
SMART:SM00181 EMBL:AE013599 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0046716 PROSITE:PS01186 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GeneTree:ENSGT00530000063501
Pfam:PF02210 GO:GO:0042052 eggNOG:NOG238064 RefSeq:NP_611082.2
ProteinModelPortal:A1ZA87 SMR:A1ZA87 PRIDE:A1ZA87
EnsemblMetazoa:FBtr0087209 GeneID:36771 KEGG:dme:Dmel_CG8403
UCSC:CG8403-RA CTD:36771 FlyBase:FBgn0034070 InParanoid:A1ZA87
OMA:EFRPESF OrthoDB:EOG4JSXMJ PhylomeDB:A1ZA87 GenomeRNAi:36771
NextBio:800300 Bgee:A1ZA87 Uniprot:A1ZA87
Length = 1361
Score = 164 (62.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 46/135 (34%), Positives = 71/135 (52%)
Query: 32 IDIKTT--SEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+++K T EQ DG+I Y D++ALY+ DG + ++F+ GSGP + S L L G
Sbjct: 644 LELKVTLKPEQADGLILYSGPEHRGDFIALYLNDGFVEFAFDLGSGPALVRSEHSLSL-G 702
Query: 89 EWHTVEFSRQQLSGKLKIDG-QVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLG 147
+WHT++ SR LK+D Q V S G L++ ++GGV N + +L
Sbjct: 703 QWHTIKISRTARLAVLKVDKHQEVLTISSNGFWH-LSLDQNLFVGGV--NHVDRLPLDLK 759
Query: 148 LNDTFVGCLRNLKSN 162
FVGC++ + N
Sbjct: 760 YKPFFVGCIQRIDIN 774
Score = 159 (61.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 43/155 (27%), Positives = 79/155 (50%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHI--DYVALYVKDGQIHY 67
+K S + +P + G +K+ I+ + S DGII + + D++AL + G + +
Sbjct: 406 AKRSWLAFPALHGAYKH-VQLRIEFRPESF-DGIILLSGERDDLTGDFMALLLNKGFVEF 463
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
F+CGSG ++ S + ++L+ EW++V R + L ++ +G S G +
Sbjct: 464 WFDCGSGVGSVRSRETILLN-EWNSVIIYRHRWDAWLVLNHGTKVQGRSNGLFSRITFRE 522
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSN 162
P +LGG+ N + L + L L + F GC+R +N
Sbjct: 523 PVFLGGIG-NITGLAK-RLPLAEGFAGCIRRFVAN 555
Score = 158 (60.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 45/150 (30%), Positives = 73/150 (48%)
Query: 29 DFSIDIKTTSEQDGIIFYVA----DVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84
D ++ IKT SE +G+I + +H DY++L ++ G +H+ ++ GSG + +
Sbjct: 1205 DLNLRIKTHSE-NGVILWTGRQGTTEEHDDYLSLGIEQGYLHFRYDLGSGEVDIRFNGTK 1263
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVR 143
+ DG WH V R G L++DG+ + G + LN Y+GG+P + T R
Sbjct: 1264 VSDGLWHRVRAIRNSQEGYLEVDGRKTVTLRAPGKLRQLNTDTGLYVGGMPDVGYFTHQR 1323
Query: 144 GNLGLNDTFVGCLRN--LKSNNKLVQDKHT 171
G+ VGC+ L KL D +T
Sbjct: 1324 YFSGI----VGCISEIVLAGEMKLNFDPNT 1349
Score = 100 (40.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 31/109 (28%), Positives = 48/109 (44%)
Query: 207 MELKMDVKPRNISGLLL--SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFF 264
+ELK+ +KP GL+L + D+ L + DG V+ D G GP A+
Sbjct: 644 LELKVTLKPEQADGLILYSGPEHRGDFIALYLNDGFVEFAFDLGSGP--ALVRSEHSLSL 701
Query: 265 CDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
GQWHTI +T + + VD + + G + +F+GG
Sbjct: 702 --GQWHTIKISRTARLAVLKVDKHQ-EVLTISSNGFWHLSLDQNLFVGG 747
Score = 84 (34.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 31/136 (22%), Positives = 56/136 (41%)
Query: 187 FFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL------SVHSKKDYFILQMIDGS 240
F YN + V + + +L + +K + +G++L + DY L + G
Sbjct: 1188 FHYNDADTMSQVISYSI----DLNLRIKTHSENGVILWTGRQGTTEEHDDYLSLGIEQGY 1243
Query: 241 VKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGS 300
+ D G G + + + DG WH + AI+ + VD T L PG
Sbjct: 1244 LHFRYDLGSGEVDIRFNGTK---VSDGLWHRVRAIRNSQEGYLEVDGRKTVT--LRAPGK 1298
Query: 301 -SETDTNNAVFIGGHP 315
+ +T+ +++GG P
Sbjct: 1299 LRQLNTDTGLYVGGMP 1314
>UNIPROTKB|P31696 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007171 "activation of transmembrane receptor protein tyrosine
kinase activity" evidence=IDA] [GO:0035374 "chondroitin sulfate
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045202 "synapse" evidence=ISS] [GO:0045887 "positive
regulation of synaptic growth at neuromuscular junction"
evidence=ISS] [GO:0043236 "laminin binding" evidence=IDA]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=ISS] [GO:0051491 "positive regulation of filopodium
assembly" evidence=ISS] [GO:0033691 "sialic acid binding"
evidence=IDA] [GO:0043395 "heparan sulfate proteoglycan binding"
evidence=IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0002162
"dystroglycan binding" evidence=IDA] [GO:0043113 "receptor
clustering" evidence=ISS;IDA] [GO:0030548 "acetylcholine receptor
regulator activity" evidence=IDA] [GO:0030297 "transmembrane
receptor protein tyrosine kinase activator activity" evidence=IDA]
[GO:0005605 "basal lamina" evidence=ISS] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 PROSITE:PS50026 PROSITE:PS51121 PROSITE:PS51465
SMART:SM00181 SMART:SM00280 InterPro:IPR000152 GO:GO:0007275
GO:GO:0005615 GO:GO:0009986 GO:GO:0030154 GO:GO:0043525
GO:GO:0045887 GO:GO:0045944 GO:GO:0007009 GO:GO:0008201
GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043236 GO:GO:0043113
GO:GO:0007213 PROSITE:PS01186 GO:GO:0033691 GO:GO:0002162
EMBL:U35613 EMBL:M94271 EMBL:M97371 EMBL:M97372 EMBL:U07271
IPI:IPI00579891 IPI:IPI00590466 IPI:IPI00592771 IPI:IPI00597536
IPI:IPI00603573 IPI:IPI00786263 PIR:JH0591 RefSeq:NP_990858.1
UniGene:Gga.4448 UniGene:Gga.48948 PDB:1JB3 PDB:1JC7 PDB:1PXU
PDB:1PZ7 PDB:1PZ8 PDB:1PZ9 PDB:1Q56 PDB:3I70 PDBsum:1JB3
PDBsum:1JC7 PDBsum:1PXU PDBsum:1PZ7 PDBsum:1PZ8 PDBsum:1PZ9
PDBsum:1Q56 PDBsum:3I70 ProteinModelPortal:P31696 SMR:P31696
IntAct:P31696 STRING:P31696 PRIDE:P31696 GeneID:396538
KEGG:gga:396538 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 OrthoDB:EOG4HQDHD
EvolutionaryTrace:P31696 NextBio:20816574 GO:GO:0030548
GO:GO:0035374 GO:GO:0043395 GO:GO:0030297 GO:GO:0051491
GO:GO:2000541 GO:GO:0032321 GO:GO:0032314 InterPro:IPR002049
InterPro:IPR003645 InterPro:IPR001791 InterPro:IPR000082
InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
SUPFAM:SSF50242 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 Uniprot:P31696
Length = 2081
Score = 160 (61.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 47/178 (26%), Positives = 87/178 (48%)
Query: 31 SIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEW 90
+++ + T E G++ Y + D+++L + G + FN GSG ++S + + G+W
Sbjct: 1413 AMEFRAT-ELSGLLLYNGQNRGKDFISLALVGGFVELRFNTGSGTGVITSKVR-VEPGKW 1470
Query: 91 HTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLND 150
H + +R + SG L +DG+ V+ GES + LN+ ++GG P + +V
Sbjct: 1471 HQLVVNRNRRSGMLAVDGEHVS-GESPTGTDGLNLDTDLFVGGAPEDQMAVVAERTAATV 1529
Query: 151 TFVGCLRNLKSNNKL--VQDKHTS----SGVIPC-SDKTESGVFFYNSGGYVKGVEQF 201
G +R L NN++ +++K + SGV C +D + + +VK E F
Sbjct: 1530 GLKGSIRLLDVNNQMYDLREKGSDVLYGSGVGECGNDPCHPNPCHHGASCHVKEAEMF 1587
Score = 145 (56.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 41/155 (26%), Positives = 73/155 (47%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
F + IKT + Q I++ ++ DY+AL + DG + ++ GS P+ L S I
Sbjct: 1929 FELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMMYDLGSKPVVLRSTVP-INTNH 1987
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLN 149
W ++ R Q G L++ + G S + L+ G +LGG+ S + +
Sbjct: 1988 WTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGME-RLSVAHKLPKAYS 2046
Query: 150 DTFVGCLRNL---KSNNKLVQDKHTSSGVIPCSDK 181
F+GC+R++ + LV+D + ++ CS K
Sbjct: 2047 TGFIGCIRDVIVDRQELHLVEDALNNPTILHCSAK 2081
Score = 141 (54.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 44/142 (30%), Positives = 71/142 (50%)
Query: 42 GIIFY---VADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQ 98
G+IFY D K D+V+L + DG + Y ++ G G L S + + L+ W +V R
Sbjct: 1689 GMIFYNGQKTDGKG-DFVSLALHDGYLEYRYDLGKGAAVLRSKEPVPLN-TWISVLLERS 1746
Query: 99 QLSGKLKIDGQVVAEGESKGSSKT----LNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVG 154
G ++I+ GES S K LN+ PFY+GG P + S L R ++ +F G
Sbjct: 1747 GRKGVMRINNGERVMGESPKSRKVPHAFLNLKEPFYVGGAP-DFSKLARA-AAISTSFYG 1804
Query: 155 CLRNLKSNN-KLVQDKHTSSGV 175
++ + L++++H S V
Sbjct: 1805 AVQRISIKGVPLLKEQHIRSAV 1826
Score = 92 (37.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 210 KMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCD 266
++ +K GL+L + DY L ++DG V+ D G P+ + + P
Sbjct: 1930 ELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMMYDLGSKPV--VLRSTVP--INT 1985
Query: 267 GQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSK 322
W I A + + S+ V + G P G+++ DT+ A+++GG LS++ K
Sbjct: 1986 NHWTHIKAYRVQREGSLQVGN-EAPITGSSPLGATQLDTDGALWLGGMERLSVAHK 2040
Score = 53 (23.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 189 YNSGGYVK--GVEQ-FRVGREMELKMDVKPRNISGLLL----SVHSKKDYFILQMIDGSV 241
+N Y++ G++ F R+M +++ ++ SG++ K D+ L + DG +
Sbjct: 1655 FNGFSYLELNGLQTLFLTCRQMSMEVVFLAKSPSGMIFYNGQKTDGKGDFVSLALHDGYL 1714
Query: 242 KATVDNGKGPISAIYTPSDP 261
+ D GKG +A+ +P
Sbjct: 1715 EYRYDLGKG--AAVLRSKEP 1732
>UNIPROTKB|E1C8Q7 [details] [associations]
symbol:E1C8Q7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0007416 "synapse
assembly" evidence=IEA] InterPro:IPR000742 InterPro:IPR027149
Pfam:PF00008 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0005246 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:AADN02003517 EMBL:AADN02003518
EMBL:AADN02003519 EMBL:AADN02003520 EMBL:AADN02003521
EMBL:AADN02003522 EMBL:AADN02003523 EMBL:AADN02003524
EMBL:AADN02003525 EMBL:AADN02003526 EMBL:AADN02003527
EMBL:AADN02003528 EMBL:AADN02003529 EMBL:AADN02003530
EMBL:AADN02003531 EMBL:AADN02003532 EMBL:AADN02003533
EMBL:AADN02003534 EMBL:AADN02003535 EMBL:AADN02003536
EMBL:AADN02003537 EMBL:AADN02003538 EMBL:AADN02003539
IPI:IPI00971464 ProteinModelPortal:E1C8Q7
Ensembl:ENSGALT00000017127 OMA:CSRLSTK ArrayExpress:E1C8Q7
Uniprot:E1C8Q7
Length = 1540
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 82/314 (26%), Positives = 124/314 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 705 EAEDVSFRFMSQRAYGLLMATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNA 758
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D V AEG G L F+
Sbjct: 759 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLMVDDDV-AEGTMVGDHTRLE----FH- 811
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 812 -NIETGIMTEKRYISVIPSSFIGHLQSLMFNGMLYIDLCKNGDIDYCELKARFGLRNIIA 870
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F Y+ + + M L K + G +L + D+ ++++ G +
Sbjct: 871 DPVTFKTKSSYLS-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGNDFIAVELVKGYIH 929
Query: 243 ATVDNGKGPISAIYTPSD-PYFFCDGQWHTIVAIK-TKNVISVAVDS-MTTDKPGLGPPG 299
D G GP + I SD P D QWH +V + N S+ VD+ M T G
Sbjct: 930 YVFDLGNGP-NVIKGNSDRP--LNDNQWHNVVITRDNSNTHSLKVDTKMVTQVIN----G 982
Query: 300 SSETDTNNAVFIGG 313
+ D ++I G
Sbjct: 983 AKNLDLKGDLYIAG 996
Score = 159 (61.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS I+F D D++A+ + G IHY F
Sbjct: 877 TKSSYLSLATLQAYTSMHLFFQF--KTTSADGFILFNSGDGN--DFIAVELVKGYIHYVF 932
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSG-KLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + D+ + D +WH V +R + LK+D ++V + + +K L++ G
Sbjct: 933 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKMVTQVIN--GAKNLDLKG 990
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL---VQDKHTSSGVI 176
Y+ G+ + + + D F GCL ++ N +L + D SG I
Sbjct: 991 DLYIAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQI 1042
Score = 154 (59.3 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 50/177 (28%), Positives = 86/177 (48%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D + +D+ A+ + DG ++ + G
Sbjct: 466 KRMGSISFDFRTT-EPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMG 524
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLG
Sbjct: 525 SGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GESEILDLEGDMYLG 583
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGV-IPCS 179
G+P N + L+ LN +VGC+R+L +S N + + + ++GV CS
Sbjct: 584 GLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEAQNAAGVKSSCS 640
Score = 136 (52.9 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 38/137 (27%), Positives = 61/137 (44%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S KT G++ Y D D++ L + DG+I F+ + + DK + D
Sbjct: 50 ELSFQFKTNVSA-GLLLYFDDGGVCDFLCLSLVDGRIQLQFSVDCAETTVIT-DKQVNDS 107
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH + SR L L +DG+ GE + + +NI ++GGVP + + L +
Sbjct: 108 NWHFLMVSRNHLRTVLVLDGEA-KPGEVRPQRQYMNIVSDLFVGGVPSYIRPAALTLDGV 166
Query: 147 GLNDTFVGCLRNLKSNN 163
F G + NLK N
Sbjct: 167 LSEPPFQGFILNLKYGN 183
Score = 133 (51.9 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLIL 86
+ ++ KT +++G+I + K DYV L +KDG + N GSG + +
Sbjct: 282 EITLSFKTW-QRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN 338
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
D WH V+ +R + +DG + G ++ L FY+GG P +T+ L G+
Sbjct: 339 DNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-STADLP-GS- 395
Query: 147 GLNDTFVGCLRNL--KSNN------KLVQDKHTSSGV-----IPCSD-KTESGVFFYNSG 192
+++ F+GCL+ + K+N+ +L + T + C + T + F
Sbjct: 396 PVSNNFMGCLKEVVYKNNDIRLELSRLARIGDTKMKIYGEVKFVCENVATLDPISFETPE 455
Query: 193 GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
Y+ + ++ R + D + +GL+L H K
Sbjct: 456 AYIS-LPKWNTKRMGSISFDFRTTEPNGLILFTHGK 490
Score = 111 (44.1 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 27/108 (25%), Positives = 49/108 (45%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + DG+V ++ G G AI P + F D
Sbjct: 282 EITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DN 340
Query: 268 QWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
WH + + ++++VD + T G + +++ ++GG P
Sbjct: 341 AWHDVKVTRNLRQVTISVDGILTTT-GYTQEDYTMLGSDDFFYVGGSP 387
Score = 84 (34.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KP+ ++K D+F ++++DG++ +D G G I T DG+W+ +
Sbjct: 490 KPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKAN---DGEWYHVD 546
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+S T P G SE D +++GG P
Sbjct: 547 IQRDGRSGTISVNSRRT--P-FTASGESEILDLEGDMYLGGLP 586
Score = 60 (26.2 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 42/185 (22%), Positives = 75/185 (40%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNIS--- 219
N+ + D T +G + + E+ + Y+ Y+K + + E E DV R +S
Sbjct: 663 NRFICDC-TGTGYWGRTCEREASILSYDGSMYMKIIMPMVMHTEAE---DVSFRFMSQRA 718
Query: 220 -GLLLSVHSKK--DYFILQMIDGSVKATV--DNGKGPISAIYTPSDPYF---FCDGQWHT 271
GLL++ S+ D L++ G VK V D + +A P Y D +WHT
Sbjct: 719 YGLLMATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNASKGPETLYAGQKLNDNEWHT 778
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRR 331
+ ++ + + VD D +G H L + ++G T++R
Sbjct: 779 VRVVRRGKSLKLMVDD----------------DVAEGTMVGDHTRLEFHNIETGIMTEKR 822
Query: 332 SVFLI 336
+ +I
Sbjct: 823 YISVI 827
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 237 IDGSVKATVDNGK--GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPG 294
I G VK +N PIS TP + Y +W+T K + S++ D TT+ G
Sbjct: 432 IYGEVKFVCENVATLDPIS-FETP-EAYISLP-KWNT------KRMGSISFDFRTTEPNG 482
Query: 295 L 295
L
Sbjct: 483 L 483
>ZFIN|ZDB-GENE-070206-5 [details] [associations]
symbol:nrxn2a "neurexin 2a" species:7955 "Danio
rerio" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-070206-5 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:AL845282 EMBL:AL929386 EMBL:BX255886
EMBL:BX927322 EMBL:CR339042 EMBL:CR376834 EMBL:CR405687
EMBL:CT027649 IPI:IPI00828998 Ensembl:ENSDART00000087657
ArrayExpress:E9QCJ3 Bgee:E9QCJ3 Uniprot:E9QCJ3
Length = 1670
Score = 170 (64.9 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 44/141 (31%), Positives = 75/141 (53%)
Query: 31 SIDIKTTSEQDGIIFYV-----ADVKH---IDYVALYVKDGQIHYSFNCGSGPMALSSGD 82
S D +TT E +G++ + H +D+ A+ + DG +H + GSG + + G+
Sbjct: 509 SFDFRTT-EPNGLLLFSHGRPQGSKDHRPRVDFFAMELLDGFLHLLMDMGSGSIKIKVGN 567
Query: 83 KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLV 142
K + DGEW V+F R+ G + ++G+ + ++GS + L++ G YLGG+P N+ L
Sbjct: 568 KKVNDGEWCHVDFQREGRKGSISVNGRSLPFSTNEGS-EILDLDGEMYLGGLPENSGDLS 626
Query: 143 RG----NLGLNDTFVGCLRNL 159
L FVGC+R+L
Sbjct: 627 LPPEVWTARLRLGFVGCVRDL 647
Score = 169 (64.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTV 93
KTTS I+F D D++ + + G IHY F+ G+GP + + DK + D +WH V
Sbjct: 936 KTTSPDGLILFNSGDGS--DFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPLNDNQWHNV 993
Query: 94 EFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
SR + LKID + V + S G+ + L++ G Y+GGV + + + D +
Sbjct: 994 MVSRDDSNVHTLKIDSRTVTQ-HSNGA-RNLDLKGELYIGGVGKSMYNSLPKLIASRDGY 1051
Query: 153 VGCLRNLKSNNKL 165
GCL ++ N +L
Sbjct: 1052 QGCLASVDLNGRL 1064
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 65/250 (26%), Positives = 104/250 (41%)
Query: 74 GPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
GP L +G KL D EWH+V+ R+ S +L +D V EG+ G+ L F+
Sbjct: 797 GPETLFAGHKLN-DNEWHSVKVVRRGKSLQLSVDN-VTVEGQMSGAHTQLE----FH--H 848
Query: 134 VPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG-------- 185
+ T R + F+G L+ L N D+ + + C G
Sbjct: 849 IETGIMTERRFISVMPSNFIGHLQGLSFNGMPYLDQCKNGDISYCELNARFGMRRIVADP 908
Query: 186 VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVKAT 244
V F N YV + + M L K + GL+L + D+ +++++ G +
Sbjct: 909 VSFRNRASYV-ALSTLQAYASMHLFFQFKTTSPDGLILFNSGDGSDFIVIELVKGYIHYV 967
Query: 245 VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKT-KNVISVAVDSMTTDKPGLGPPGSSET 303
D G GP S + SD D QWH ++ + NV ++ +DS T + G+
Sbjct: 968 FDLGNGP-SLMKGNSDKPLN-DNQWHNVMVSRDDSNVHTLKIDSRTVTQHS---NGARNL 1022
Query: 304 DTNNAVFIGG 313
D ++IGG
Sbjct: 1023 DLKGELYIGG 1032
Score = 138 (53.6 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 40/137 (29%), Positives = 67/137 (48%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG--QIHYSFNCGSGPMALSSGDKLIL 86
+ S +KT + I+ Y+ D + D++ L + DG Q+ ++ +CG P +L + I
Sbjct: 51 ELSFTMKTNISK-AIVLYLDDGGNCDFLELLINDGRLQLRFAIHCGE-PASLHM-ETHIS 107
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQV-VAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVR 143
D WH V +R L +DG+ VAE +SK + + + Y+GG+P + S L
Sbjct: 108 DERWHRVLLTRNYRETMLVMDGESKVAEVKSK--RREMMVASDLYVGGIPPDVRLSALTS 165
Query: 144 GNLGLNDTFVGCLRNLK 160
+ F G + NLK
Sbjct: 166 STVKYEPPFRGLIANLK 182
Score = 91 (37.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 36/155 (23%), Positives = 64/155 (41%)
Query: 177 PCSDKTESGVFFYNSGGYVKGVEQFRVGREM-ELKMDVKPRNISGLLLSVHSKKDYFILQ 235
P S + ES F + + + Q + E+ + + +GLLL DY L
Sbjct: 272 PKSGQVESVATFKGNEFFSYDLSQKPIQSSTDEITLSFRTLQRNGLLLHTGKSADYVNLS 331
Query: 236 MIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI-----------VAIKTKN----V 280
+ G+V ++ G G A+ PSD F D WH + V + T N +
Sbjct: 332 LKSGAVCLVINLGSGAFEALVEPSDGKFN-DNAWHAVRVSRNLRQRAGVGLPTVNKLHYM 390
Query: 281 ISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
++++VD + T G + +++ ++GG P
Sbjct: 391 VTISVDGLLTTT-GYTQEDYTMLGSDDFFYVGGSP 424
Score = 74 (31.1 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 31/132 (23%), Positives = 59/132 (44%)
Query: 171 TSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREME-LKMDVKPRNISGLLLSVHSKK 229
T +G + + + ES V Y+ ++K + E E + + + GLL++ SK+
Sbjct: 703 TGTGYMGPNCEMESAVLSYDGSMFLKVLMPHAAHSEAEDVSLRFMSQRAYGLLMATTSKE 762
Query: 230 --DYFILQMIDGSVKATVDNGKGPISAIY--TPSDPY-FFC-----DGQWHTIVAIKTKN 279
D L++ G VK TV+ I T P F D +WH++ ++
Sbjct: 763 SADTLRLELDGGRVKLTVNLDCIGIDCNLNSTSKGPETLFAGHKLNDNEWHSVKVVRRGK 822
Query: 280 VISVAVDSMTTD 291
+ ++VD++T +
Sbjct: 823 SLQLSVDNVTVE 834
Score = 64 (27.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 230 DYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMT 289
D+F ++++DG + +D G G I I + DG+W + + S++V+ +
Sbjct: 539 DFFAMELLDGFLHLLMDMGSGSIK-IKVGNKKVN--DGEWCHVDFQREGRKGSISVNGRS 595
Query: 290 TDKPGLGPPGSSETDTNNAVFIGGHP 315
P GS D + +++GG P
Sbjct: 596 L--PFSTNEGSEILDLDGEMYLGGLP 619
>MGI|MGI:96257 [details] [associations]
symbol:Hspg2 "perlecan (heparan sulfate proteoglycan 2)"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0002062 "chondrocyte differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007420 "brain development" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] Reactome:REACT_112621 InterPro:IPR000742
InterPro:IPR002172 InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057
PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181
SMART:SM00192 MGI:MGI:96257 GO:GO:0008104 GO:GO:0007420
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030198 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0048738 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
Reactome:REACT_118324 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 SMART:SM00200 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 GO:GO:0005796
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
PDB:1GL4 PDBsum:1GL4 CTD:3339 eggNOG:NOG258321 HOGENOM:HOG000049276
HOVERGEN:HBG008174 KO:K06255 EMBL:M77174 EMBL:J04054 EMBL:J04055
IPI:IPI00113824 PIR:S18252 RefSeq:NP_032331.2 UniGene:Mm.273662
ProteinModelPortal:Q05793 SMR:Q05793 IntAct:Q05793 MINT:MINT-215413
STRING:Q05793 PhosphoSite:Q05793 PaxDb:Q05793 PRIDE:Q05793
GeneID:15530 KEGG:mmu:15530 EvolutionaryTrace:Q05793 NextBio:288458
CleanEx:MM_HSPG2 Genevestigator:Q05793
GermOnline:ENSMUSG00000028763 Uniprot:Q05793
Length = 3707
Score = 197 (74.4 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 44/127 (34%), Positives = 70/127 (55%)
Query: 37 TSEQDGIIFYVADVKHI----DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHT 92
TS DG++ + V+ D+++L ++DG + +S+ GSG L SGD I DGEWH
Sbjct: 3553 TSTADGLLLWQGVVREASRSKDFISLGLQDGHLVFSYQLGSGEARLVSGDP-INDGEWHR 3611
Query: 93 VEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
+ R+ G +++DG+ + G S G + +N Y+GG P + +TL RG T
Sbjct: 3612 ITALREGQRGSIQVDGEDLVTGRSPGPNVAVNTKDIIYIGGAP-DVATLTRGKFSSGIT- 3669
Query: 153 VGCLRNL 159
GC++NL
Sbjct: 3670 -GCIKNL 3675
Score = 152 (58.6 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHI--DYVALYVKDGQIHYSFN 70
S + P +T ++ ++ K E +GI+ + D+V+L + G + + +
Sbjct: 3254 SYLALPALTNTH-HELRLDVEFKPL-EPNGILLFSGGKSGPVEDFVSLAMVGGHLEFRYE 3311
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFY 130
GSG L S + L L G WH V R G L++DG S G S+ LN+ Y
Sbjct: 3312 LGSGLAVLRSHEPLAL-GRWHRVSAERLNKDGSLRVDGGRPVLRSSPGKSQGLNLHTLLY 3370
Query: 131 LGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT---SSGVIPCSDKT 182
LGGV + N+ + F GC+ + N K + ++ S GV C D +
Sbjct: 3371 LGGVEPSVQLSPATNMSAH--FHGCVGEVSVNGKRLDLTYSFLGSQGVGQCYDSS 3423
Score = 145 (56.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 48/177 (27%), Positives = 82/177 (46%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK--------HIDYVALYVKDGQ 64
S + PTI ++ KF+ I + S DG++ Y + D+++ + G+
Sbjct: 2993 SFLPLPTIKDAYR-KFEIKITFRPDSA-DGMLLYNGQKRSPTNLANRQPDFISFGLVGGR 3050
Query: 65 IHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLN 124
+ F+ GSG + L L G++HTV R G L + G S+G + L+
Sbjct: 3051 PEFRFDAGSGMATIRHPTPLAL-GQFHTVTLLRSLTQGSLIVGNLAPVNGTSQGKFQGLD 3109
Query: 125 IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLK-SNNKLV-QDKH-TSSGVIPC 178
+ YLGG P + + + GL+ FVGC+R L+ ++V D + T+ G+ C
Sbjct: 3110 LNEELYLGGYP-DYGAIPKA--GLSSGFVGCVRELRIQGEEIVFHDVNLTTHGISHC 3163
Score = 100 (40.3 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 38/140 (27%), Positives = 60/140 (42%)
Query: 185 GVFFYNSGGY-VKGVEQFRVGREME--LKMDVKPRNISGLLL------SVHSKKDYFILQ 235
G +FY++G + G R E+ ++ +V+ GLLL KD+ L
Sbjct: 3520 GAYFYDNGFLGLPGNSFSRSLPEVPETIEFEVRTSTADGLLLWQGVVREASRSKDFISLG 3579
Query: 236 MIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGL 295
+ DG + + G G A DP DG+WH I A++ S+ VD G
Sbjct: 3580 LQDGHLVFSYQLGSG--EARLVSGDP--INDGEWHRITALREGQRGSIQVDGEDL-VTGR 3634
Query: 296 GPPGSSETDTNNAVFIGGHP 315
P + +T + ++IGG P
Sbjct: 3635 SPGPNVAVNTKDIIYIGGAP 3654
Score = 90 (36.7 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 35/137 (25%), Positives = 62/137 (45%)
Query: 191 SGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK----KDYFILQMIDGSVKATVD 246
+G Y+ E+ L ++ KP +G+LL K +D+ L M+ G ++ +
Sbjct: 3252 AGSYLALPALTNTHHELRLDVEFKPLEPNGILLFSGGKSGPVEDFVSLAMVGGHLEFRYE 3311
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGL-GPPGSSE-TD 304
G G A+ +P G+WH + A + S+ VD +P L PG S+ +
Sbjct: 3312 LGSG--LAVLRSHEPLAL--GRWHRVSAERLNKDGSLRVDG---GRPVLRSSPGKSQGLN 3364
Query: 305 TNNAVFIGG-HPFLSLS 320
+ +++GG P + LS
Sbjct: 3365 LHTLLYLGGVEPSVQLS 3381
>ZFIN|ZDB-GENE-030131-1033 [details] [associations]
symbol:agrn "agrin" species:7955 "Danio rerio"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043113 "receptor
clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 ZFIN:ZDB-GENE-030131-1033 GO:GO:0009952 GO:GO:0007422
GO:GO:0007417 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
GO:GO:0007409 PROSITE:PS01186 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 InterPro:IPR011497
EMBL:EU716327 IPI:IPI00897584 RefSeq:NP_001170923.1
UniGene:Dr.44162 ProteinModelPortal:B3GQ72 GeneID:565373
KEGG:dre:565373 eggNOG:NOG291045 NextBio:20885851 Uniprot:B3GQ72
Length = 2028
Score = 167 (63.8 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 41/139 (29%), Positives = 69/139 (49%)
Query: 38 SEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSR 97
SE GI+ Y D+++L + +G + FN GSG ++ S L+ G WH + R
Sbjct: 1391 SEMTGILLYDGQKSKKDFLSLTLIEGYVELRFNTGSGTASVIS-KVLVKPGRWHQLVVVR 1449
Query: 98 QQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR 157
+ + L +D + EG+S + LN+ ++GGV + S V+ ++ VGC+R
Sbjct: 1450 NRRNAMLSVDNEPSVEGQSPPGTDGLNLDTDLFIGGVLDDMSADVKERTSVSAGLVGCIR 1509
Query: 158 NLKSNNKLVQDKHTSSGVI 176
L NN LV + + G +
Sbjct: 1510 MLDVNN-LVYNLQENGGSV 1527
Score = 160 (61.4 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFY---VADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG 81
+ KF +I + ++ G+IFY D K D+++L + DG + + ++ G GP + S
Sbjct: 1645 RQKFSMTI-VLLANDSKGMIFYNGQKTDGKG-DFISLSLNDGILEFRYDLGKGPAVIRSK 1702
Query: 82 DKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTL 141
+K+ L+ EW+TV R G++ I+G+ GE+ LN+ ++GG P + +
Sbjct: 1703 EKIKLN-EWNTVNLERASRKGEISINGKDPVRGEAPNQHTDLNLKESLFVGGAP-DFRKV 1760
Query: 142 VRGNLGLNDTFVGCLRN--------LKSNNKLVQDKHTSSGVIPCS-DKTESG 185
R D F G ++ LK++N L + PCS D E+G
Sbjct: 1761 ARA-AAFKDGFKGAIQKITLMGIPILKADNALSSTDVSMYPNHPCSKDVCENG 1812
Score = 149 (57.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 43/160 (26%), Positives = 78/160 (48%)
Query: 26 NKFDFSIDIKTTSEQDGIIFYVAD-VKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84
NKF+ SI + T G+I + V+ DY+AL + DG++ +++ GS P+ L S +
Sbjct: 1874 NKFELSIRTEATH---GLILWSGKGVERSDYIALAIVDGRVQMTYDLGSKPVVLRSTVR- 1929
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
+ W ++ SR G L++ + G S ++ L+ G +LGG+ S R
Sbjct: 1930 VNTNHWIRIKASRALRDGSLQVGNEAAVTGSSPLAATQLDTDGALWLGGLE-ELSVARRL 1988
Query: 145 NLGLNDTFVGCLRNLKSNN---KLVQDKHTSSGVIPCSDK 181
+ F+GC++++ + LV+D + + CS K
Sbjct: 1989 PKAYSTGFIGCVKDVIVDGVELHLVEDALNTPKISHCSAK 2028
Score = 77 (32.2 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 28/118 (23%), Positives = 52/118 (44%)
Query: 208 ELKMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFF 264
+ ++ ++ GL+L + DY L ++DG V+ T D G P+ T
Sbjct: 1875 KFELSIRTEATHGLILWSGKGVERSDYIALAIVDGRVQMTYDLGSKPVVLRSTVR----V 1930
Query: 265 CDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSK 322
W I A + S+ V + G P +++ DT+ A+++GG LS++ +
Sbjct: 1931 NTNHWIRIKASRALRDGSLQVGNEAA-VTGSSPLAATQLDTDGALWLGGLEELSVARR 1987
Score = 71 (30.1 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 29/147 (19%), Positives = 60/147 (40%)
Query: 179 SDKTESGVFFYNSGGYV--KGVEQFRVGREMELKMDVK--PRNISGLLL----SVHSKKD 230
SDK + + ++ ++ KG+ + + M + + G++ K D
Sbjct: 1616 SDKGGAFIPYFTGDSFLELKGLHTYNQDLRQKFSMTIVLLANDSKGMIFYNGQKTDGKGD 1675
Query: 231 YFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTT 290
+ L + DG ++ D GKGP A+ + +W+T+ + ++++
Sbjct: 1676 FISLSLNDGILEFRYDLGKGP--AVIRSKEKIKL--NEWNTVNLERASRKGEISINGKD- 1730
Query: 291 DKPGLGPPGSSETDTN--NAVFIGGHP 315
P G + TD N ++F+GG P
Sbjct: 1731 --PVRGEAPNQHTDLNLKESLFVGGAP 1755
>UNIPROTKB|F5GYC7 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0051965 "positive regulation
of synapse assembly" evidence=IEA] [GO:0090129 "positive regulation
of synapse maturation" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027158
PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
PANTHER:PTHR10127:SF309 EMBL:AC007462 EMBL:AC007682 EMBL:AC009234
EMBL:AC068725 EMBL:AC069550 EMBL:AC078994 EMBL:AC068715
HGNC:HGNC:8008 ChiTaRS:NRXN1 EMBL:AC007560 IPI:IPI00893903
ProteinModelPortal:F5GYC7 SMR:F5GYC7 Ensembl:ENST00000402717
ArrayExpress:F5GYC7 Bgee:F5GYC7 Uniprot:F5GYC7
Length = 1499
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 491 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 549
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 550 SGTIKIKALLKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 608
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 609 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSKET 668
Score = 160 (61.4 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 730 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 783
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 784 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 837
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 838 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 896
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 897 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 955
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 956 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 1010
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 1011 NLDLKSDLYIGG 1022
Score = 148 (57.2 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 903 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 958
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 959 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1016
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 1017 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 1071
Score = 137 (53.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDGQIHYSFNCGSGPMALSSGDKLILD 87
+ S +KT S + G++ Y D D++ L + + G++ SF+ A D + D
Sbjct: 53 EMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVND 111
Query: 88 GEWHTVEFSRQQLSGKLKIDGQVVAEG-ESKGSSKTLNIFGPFYLGGVP--LNTSTL--V 142
G WH+V RQ + L ID QV A+ E K + + +F ++GG+P L + L
Sbjct: 112 GAWHSVRIRRQFRNTTLFID-QVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLT 170
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGG 193
++ + F G +R+++ N+ V SG + D+ NSGG
Sbjct: 171 LASVREREPFKGWIRDVRVNSSQVLP--VDSGEVKLDDEPP------NSGG 213
Score = 126 (49.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 52/216 (24%), Positives = 99/216 (45%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 307 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 363
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
D WH V+ +R + +DG + G ++ L FY+GG P +T+ L G+
Sbjct: 364 DNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-STADLP-GS- 420
Query: 147 GLNDTFVGCLRNL--KSNN------KLVQD---KHTSSGVIP--CSD-KTESGVFFYNSG 192
+++ F+GCL+ + K+N+ +L + K GV+ C + T + F
Sbjct: 421 PVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPE 480
Query: 193 GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
++ + ++ + + D + +GL+L H K
Sbjct: 481 SFIS-LPKWNAKKTGSISFDFRTTEPNGLILFSHGK 515
Score = 105 (42.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 307 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 365
Query: 268 QWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
WH + + ++++VD + T G + +++ ++GG P
Sbjct: 366 AWHDVKVTRNLRQVTISVDGILTTT-GYTQEDYTMLGSDDFFYVGGSP 412
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 27/105 (25%), Positives = 51/105 (48%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPIS--AIYTPSDPYFFCDGQWHT 271
KPR+ K D+F ++M+DG + +D G G I A+ + DG+W+
Sbjct: 515 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALLKKVN-----DGEWYH 569
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ + +++V+++ T PG SE D ++ +++GG P
Sbjct: 570 VDFQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 611
Score = 39 (18.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 270 HTIVAIKTKNVISVAVDSMTTDKP 293
H +VA K +NV ++ D +T + P
Sbjct: 458 HGVVAFKCENVATL--DPITFETP 479
>ZFIN|ZDB-GENE-070206-7 [details] [associations]
symbol:nrxn2b "neurexin 2b" species:7955 "Danio
rerio" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-070206-7 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 eggNOG:NOG302266
HOVERGEN:HBG052670 PANTHER:PTHR10127:SF405 EMBL:DQ641430
IPI:IPI00829082 RefSeq:NP_001073453.1 UniGene:Dr.107077
ProteinModelPortal:A1XQX6 SMR:A1XQX6 GeneID:560420 KEGG:dre:560420
CTD:560420 NextBio:20883436 Uniprot:A1XQX6
Length = 1586
Score = 143 (55.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
DY A+ + DG ++ + GSG + + + +K + DGEW V+F R+ G + ++ + +
Sbjct: 484 DYFAMELLDGFLYLLMDMGSGSIKIKASNKKVNDGEWCHVDFQREGRRGSISVNSRSMPF 543
Query: 114 GESKGSSKTLNIFGPFYLGGVPLNTSTLVRG----NLGLNDTFVGCLRNLKSNNK 164
++GS + L++ YLGG+P LV LN +VGC+R+L + K
Sbjct: 544 STNEGS-EILDLDSDMYLGGLPEMRQGLVLPPEVWTALLNYGYVGCVRDLFIDGK 597
Score = 141 (54.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 43/158 (27%), Positives = 73/158 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
SK S + T+ F KTT ++F D D++ + + G +HY F
Sbjct: 806 SKGSYLALATLQAYASMHLFFQF--KTTGSDGLMLFNSGDGS--DFIVVELVKGFVHYVF 861
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + +K + D +WH V SR LKID + V + S G+ + L++
Sbjct: 862 DLGNGPSLMKGNSEKPLNDNQWHNVVVSRDTNDVHTLKIDSRTVTQ-HSNGA-RNLDL-R 918
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GGV + + + D + GCL ++ N +L
Sbjct: 919 ELYIGGVAKSMYNSLPKLIASRDGYQGCLASIDLNGRL 956
Score = 131 (51.2 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF--NCGSGPMALSSGDKLIL 86
+ S +KT + ++ Y+ D + D++ L + G +H F +C P L + + +
Sbjct: 45 ELSFSLKTNISK-ALVLYLDDGGNCDFLELLISGGVLHLRFAIHCAE-PATLQTETR-VS 101
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRG 144
D WH V +R L +DG+ A E + + + + ++GG+P + S L
Sbjct: 102 DDRWHMVLLTRNYRQTLLMVDGEARA-AEVRSKRREMAVVSDLFVGGIPPDVRLSALTSS 160
Query: 145 NLGLNDTFVGCLRNLK 160
+ F+G + NLK
Sbjct: 161 TVKYEPPFLGLISNLK 176
Score = 99 (39.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 40/172 (23%), Positives = 68/172 (39%)
Query: 152 FVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRV 203
F+G L+ L N D+ + + C G + F + G Y+ + +
Sbjct: 760 FIGHLQGLLLNGVPYLDQCKNGDISYCELNARFGLRHIIADPITFRSKGSYL-ALATLQA 818
Query: 204 GREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPY 262
M L K GL+L + D+ +++++ G V D G GP P
Sbjct: 819 YASMHLFFQFKTTGSDGLMLFNSGDGSDFIVVELVKGFVHYVFDLGNGPSLMKGNSEKP- 877
Query: 263 FFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
D QWH +V + T +V ++ +DS T + G+ D ++IGG
Sbjct: 878 -LNDNQWHNVVVSRDTNDVHTLKIDSRTVTQHS---NGARNLDLRE-LYIGG 924
Score = 77 (32.2 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 24/89 (26%), Positives = 44/89 (49%)
Query: 227 SKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
+K DYF ++++DG + +D G G I I + DG+W + + S++V+
Sbjct: 481 TKSDYFAMELLDGFLYLLMDMGSGSIK-IKASNKKVN--DGEWCHVDFQREGRRGSISVN 537
Query: 287 SMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
S + P GS D ++ +++GG P
Sbjct: 538 SRSM--PFSTNEGSEILDLDSDMYLGGLP 564
Score = 77 (32.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 39/143 (27%), Positives = 67/143 (46%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLILDGEWHTVE 94
T +++G++ + K DYV L +K G + N GSG AL + D WH V+
Sbjct: 252 TLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVK 309
Query: 95 FSR--QQLSG-------KLKIDGQVVAEG--ESKG-SSKTLNIFGP--FYLGGVPLNTST 140
+R +Q SG KL + +G + G + + + G F+ G NT+
Sbjct: 310 VTRNLRQHSGIGHAMVNKLHYMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTAD 369
Query: 141 LVRGNLGLNDTFVGCLRNLKSNN 163
L G+ +++ F+GCL+++ N
Sbjct: 370 LP-GS-PVSNNFMGCLKDVVYKN 390
Score = 74 (31.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + + +GL+L DY L + G+V ++ G G A+ P + F D
Sbjct: 245 EITLSFRTLQRNGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFN-DN 303
Query: 268 QWHTIVAIKTKNV 280
WH + T+N+
Sbjct: 304 AWHDVKV--TRNL 314
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 299 GSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVFLINAN 339
G + N G H L S ++G T+RR + ++ +N
Sbjct: 719 GRVKLTVNLGQMTGDHTRLEFHSIETGIMTERRFISVVPSN 759
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 212 DVK-PRNI---SGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTP--SDPYFFC 265
DVK RN+ SG+ ++ +K Y + +DG + T G YT SD +F+
Sbjct: 307 DVKVTRNLRQHSGIGHAMVNKLHYMVTISVDGILTTT-----GYTQEDYTMLGSDDFFYI 361
Query: 266 DGQWHT 271
G +T
Sbjct: 362 GGSPNT 367
Score = 39 (18.8 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 289 TTD--KPGLGPPGSSE 302
TTD P GPPG+ E
Sbjct: 1485 TTDPSSPDRGPPGAVE 1500
>UNIPROTKB|F1NZ77 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0017022 "myosin binding"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0060171 "stereocilium membrane" evidence=IEA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016324
SUPFAM:SSF49265 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
Pfam:PF02210 GO:GO:0032421 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0002142
GeneTree:ENSGT00700000104042 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AADN02012097 EMBL:AADN02012098
EMBL:AADN02012099 EMBL:AADN02012100 EMBL:AADN02012101
EMBL:AADN02012102 EMBL:AADN02012103 IPI:IPI00599063
Ensembl:ENSGALT00000015728 ArrayExpress:F1NZ77 Uniprot:F1NZ77
Length = 5217
Score = 134 (52.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 26 NKFDFSIDIK-TTSEQDGIIFYVADV-KHIDYVALYVKDGQIHYSFNC---GSGPMALSS 80
N + I +K T E DG+IF+ A +Y+AL ++ G+ ++ F+ GS +
Sbjct: 1538 NAYFTGIKVKFKTKEPDGLIFFSASPGNQEEYIALQLRSGRPYFLFDPQKKGSAVAVTPT 1597
Query: 81 GD--KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT 138
D K D WH + +R Q G + +DGQ + S + ++GG+P
Sbjct: 1598 NDGGKEYNDNSWHQIIATRIQALGNITVDGQYTGSSSATSGSTIIGENTGVFVGGLPQGY 1657
Query: 139 STLVRGN---LGLNDTFVGCLRNL 159
+ + R + + FVGCL +L
Sbjct: 1658 AVVRRDEGMKMVIQKGFVGCLSDL 1681
Score = 119 (46.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 36/145 (24%), Positives = 63/145 (43%)
Query: 178 CSDKTESGVFFYNSG--GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK--DYFI 233
C G F G GV F G+E E+ + ++GLLL V++K D+
Sbjct: 1714 CPTVLSEGAHFLGKGFLELYSGV--FSGGQEFEISFKFRTDQLNGLLLFVYNKDGPDFLA 1771
Query: 234 LQMIDGSVKATVDNGKGPISAIYTPSDPYF---FCDGQWHTIVAIKTKNVISVAVDSMTT 290
+++ G + + G ++T D + +CDG W+ + K +V+S +V+ +
Sbjct: 1772 IELKSGILNVLLKTG-----IVFTQVDLWLGLSYCDGNWNKVTVNKEGSVVSASVNELRE 1826
Query: 291 DKPGLGPPGSSETDTNNAVFIGGHP 315
P + N+ V+IGG P
Sbjct: 1827 QTL---EPNVQQLKVNSPVYIGGIP 1848
>WB|WBGene00007799 [details] [associations]
symbol:nrx-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048786
"presynaptic active zone" evidence=IDA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 GO:GO:0048786 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
EMBL:Z73970 WormBase:C29A12.4k Uniprot:I2HAJ6
Length = 1725
Score = 186 (70.5 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 54/189 (28%), Positives = 88/189 (46%)
Query: 5 VIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKH--IDYVALYVKD 62
V++ T SS + P F +TTS DG+I Y ++H DYVA + D
Sbjct: 477 VLSFTETSSYLTLPRWNSLSSGSLSFHF--RTTSS-DGLILYHGVMQHNATDYVAFELID 533
Query: 63 GQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKT 122
+ N GSG + L + + DGEWH V+ R +G + +D + + + G S
Sbjct: 534 SHLFMIINLGSGVVRLQTTSMKVSDGEWHHVQLDRLSRTGSVIVDA-IKIDFSTPGVSAN 592
Query: 123 LNIFGPFYLGGVPLNTSTLVRG--NLGLNDTFVGCLRNLKSNN---KLVQD--KHTSSGV 175
L I P ++G VP N+ ++ L + GC++N++ N K+ Q+ S+G+
Sbjct: 593 LIIDDPIFIGNVPNNSLVYPSSVWSIALQKGYTGCIKNIRMNGVSTKIGQEFEASNSTGI 652
Query: 176 -IPCSDKTE 183
+ CS E
Sbjct: 653 ELGCSLSNE 661
Score = 93 (37.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 5 VIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADV-KHIDYVALYVKDG 63
++ G + S YP F+N S+++KT + DG++ Y D H ++ +L + +G
Sbjct: 30 ILTG-APDSYARYPKWAHSFENSL--SMELKTR-QSDGMLLYTDDGGTHGNFYSLTIVEG 85
Query: 64 QIHYSFNCGSG--------PM-ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEG 114
I F G P+ + + I D +WHT+ + + KL++D +V +
Sbjct: 86 HIQLDFRLGDNSNEFGQRRPVNTIRIEEVRIDDDKWHTLTIFQSWENVKLELDYTLVFKI 145
Query: 115 ESKGSSKTLNIF--GPFYLGGVPLNTSTL 141
++ S NI ++GG+P N L
Sbjct: 146 LNQRSFVFGNILKNSDVFIGGLPPNMHML 174
Score = 87 (35.7 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 226 HSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAV 285
H+ DY ++ID + ++ G G + + T S DG+WH + + SV V
Sbjct: 521 HNATDYVAFELIDSHLFMIINLGSGVVR-LQTTSMKV--SDGEWHHVQLDRLSRTGSVIV 577
Query: 286 DSMTTDKPGLGPPG-SSETDTNNAVFIGGHPFLSL 319
D++ D PG S+ ++ +FIG P SL
Sbjct: 578 DAIKID---FSTPGVSANLIIDDPIFIGNVPNNSL 609
>UNIPROTKB|F1P3E3 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0007213 "G-protein
coupled acetylcholine receptor signaling pathway" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 InterPro:IPR000152 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113
GO:GO:0007213 PROSITE:PS01186 IPI:IPI00603573 InterPro:IPR002049
InterPro:IPR003645 InterPro:IPR001791 InterPro:IPR000082
InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
SUPFAM:SSF50242 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 InterPro:IPR011497
GeneTree:ENSGT00530000063501 EMBL:AADN02040845 EMBL:AADN02040846
EMBL:AADN02040847 EMBL:AADN02040848 EMBL:AADN02040849
EMBL:AADN02040850 EMBL:AADN02077829 Ensembl:ENSGALT00000003171
Uniprot:F1P3E3
Length = 1952
Score = 170 (64.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 31 SIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEW 90
+++ + T E G++ Y + D+++L + G + FN GSG ++S + + G+W
Sbjct: 1291 AMEFRAT-ELSGLLLYNGQNRGKDFISLALVGGFVELRFNTGSGTGVITSKVR-VEPGKW 1348
Query: 91 HTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLND 150
H + +R + SG L +DG+ GES + LN+ ++GG P + +V
Sbjct: 1349 HQLVVNRNRRSGMLAVDGEPHVSGESPTGTDGLNLDTDLFVGGAPEDQMAVVAERTAATV 1408
Query: 151 TFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
GC+R L NN++ + S V+ S E G
Sbjct: 1409 GLKGCIRLLDVNNQMYDLREKGSDVLYGSGVGECG 1443
Score = 144 (55.7 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 46/159 (28%), Positives = 76/159 (47%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFY---VADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG 81
K+K + + G+IFY D K D+V+L + DG + Y ++ G G L S
Sbjct: 1553 KDKMSMEV-VFLAKSPSGMIFYNGQKTDGKG-DFVSLALHDGYLEYRYDLGKGAAVLRSK 1610
Query: 82 DKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKT----LNIFGPFYLGGVPLN 137
+ + L+ W +V R G ++I+ GES S K LN+ PFY+GG P +
Sbjct: 1611 EPVPLN-TWISVLLERSGRKGVMRINNGERVMGESPKSRKVPHAFLNLKEPFYVGGAP-D 1668
Query: 138 TSTLVRGNLGLNDTFVGCLRNLKSNN-KLVQDKHTSSGV 175
S L R ++ +F G ++ + L++++H S V
Sbjct: 1669 FSKLARA-AAISTSFYGAVQRISIKGVPLLKEQHIRSAV 1706
Score = 65 (27.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 27/116 (23%), Positives = 48/116 (41%)
Query: 210 KMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCD 266
++ +K GL+L + DY L ++DG V+ D G P+ + + P
Sbjct: 1801 ELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMMYDLGSKPV--VLRSTVP--INT 1856
Query: 267 GQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSK 322
W I A + + S P + P G+++ D + +GG LS++ K
Sbjct: 1857 NHWTHIKAYRWEGGQDGDTGSRARP-PRVTPLGTAQEDVESRNGLGGMERLSVAHK 1911
Score = 50 (22.7 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 189 YNSGGYVK--GVEQFRVGREMELKMDVK--PRNISGLLL----SVHSKKDYFILQMIDGS 240
+N Y++ G++ F + ++ M+V ++ SG++ K D+ L + DG
Sbjct: 1534 FNGFSYLELNGLQTFLTCSKDKMSMEVVFLAKSPSGMIFYNGQKTDGKGDFVSLALHDGY 1593
Query: 241 VKATVDNGKGPISAIYTPSDP 261
++ D GKG +A+ +P
Sbjct: 1594 LEYRYDLGKG--AAVLRSKEP 1612
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 184 (69.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 54/146 (36%), Positives = 74/146 (50%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI V LY G + S++ GS P + + I DG++HTVE
Sbjct: 1057 STAEDNGILLYNGDNDHIA-VELY--QGHVRVSYDPGSYPSSAIYSTETINDGQFHTVEL 1113
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT-STLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1114 VTFDQMVNLSIDGGSPMTMDNFGKHYTLNSDAPLYVGGMPVDVNSAAFRLWQILNGTSFH 1173
Query: 154 GCLRNLKSNNKLVQDKHT--SSGVIP 177
GC+RNL NN+L T GV+P
Sbjct: 1174 GCIRNLYINNELQDFTKTRMKPGVVP 1199
>ZFIN|ZDB-GENE-070206-10 [details] [associations]
symbol:nrxn3b "neurexin 3b" species:7955 "Danio
rerio" [GO:0004872 "receptor activity" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IEA] [GO:0007416 "synapse
assembly" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-070206-10 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:BX088548 EMBL:CABZ01064259
EMBL:CABZ01064260 EMBL:CABZ01064261 EMBL:CABZ01064262
EMBL:CABZ01064263 EMBL:CABZ01064264 EMBL:CABZ01064265
EMBL:CABZ01064266 EMBL:CABZ01064267 EMBL:CABZ01064268
EMBL:CABZ01064269 EMBL:CABZ01064270 EMBL:CABZ01064271
EMBL:CABZ01064272 EMBL:CABZ01064273 EMBL:CABZ01064274
EMBL:CABZ01064275 EMBL:CABZ01064276 EMBL:CABZ01064277
EMBL:CABZ01064278 EMBL:CABZ01064279 EMBL:CABZ01064280
EMBL:CABZ01068890 EMBL:CABZ01068891 EMBL:CABZ01068892
EMBL:CABZ01068893 EMBL:CABZ01068894 IPI:IPI00999075
Ensembl:ENSDART00000127050 Uniprot:F1R5P7
Length = 1687
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 69/282 (24%), Positives = 114/282 (40%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLS 101
G++ + D + L + G++ N G GP L +G K + D +WH+V +R+ +
Sbjct: 732 GLLMAATSRESADTLRLELDSGRVKLIVNLGKGPETLYAGQK-VNDNDWHSVRVTRRGKN 790
Query: 102 GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKS 161
KL +D V AEG+ G L F G + T N F+G L+ LK
Sbjct: 791 IKLMVDDDV-AEGQMNGDHTRLE-FSNVETG---ILTERRFASTAPSN--FIGHLQGLKF 843
Query: 162 NNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRVGREMELKMDV 213
N L D + + C G V F G Y+ G+ + M L
Sbjct: 844 NGLLYIDMCKNGDIEFCELNARFGMRSIVADPVTFKTKGSYL-GLATLQAYSTMHLFFQF 902
Query: 214 KPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI 272
K + G +L + D+ ++++ G + + G GP S + SD D QWH +
Sbjct: 903 KTTSGDGFILFNSGDGNDFIAVELVKGYIHYVFNLGNGP-SLLKGNSDSPLN-DNQWHNV 960
Query: 273 VAIK-TKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
V + N ++ VD+ + + G+ D +F+ G
Sbjct: 961 VITRDASNTHTLKVDAKSVSQV---VNGAKNLDLKGDLFVAG 999
Score = 150 (57.9 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 44/147 (29%), Positives = 73/147 (49%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTV 93
KTTS I+F D D++A+ + G IHY FN G+GP L + D + D +WH V
Sbjct: 903 KTTSGDGFILFNSGDGN--DFIAVELVKGYIHYVFNLGNGPSLLKGNSDSPLNDNQWHNV 960
Query: 94 EFSRQQLSGK-LKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
+R + LK+D + V++ + +K L++ G ++ G+ N + + + F
Sbjct: 961 VITRDASNTHTLKVDAKSVSQVVN--GAKNLDLKGDLFVAGLGPNMYQNLPKLVVSREGF 1018
Query: 153 VGCLRNLKSNNKL---VQDKHTSSGVI 176
GCL ++ N +L + D SG I
Sbjct: 1019 QGCLASMDLNGRLPDLINDALFRSGQI 1045
Score = 148 (57.2 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 40/141 (28%), Positives = 64/141 (45%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQI--HYSFNCGSGPMALSSGDKLIL 86
D S KT D ++ Y D + D++ L ++D ++ H+S +C + + DK++
Sbjct: 46 DLSFQFKTAIS-DALVLYFDDGGYCDFLLLSIEDAKLKLHFSVDCAETTI---TSDKMVN 101
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRG 144
D WH SR L L +DG + E + + + I YLGGVP + TS L
Sbjct: 102 DSHWHFATISRHNLRTVLALDGDSKVD-EVRPQRQFMKIVSDLYLGGVPQDIRTSALTLP 160
Query: 145 NLGLNDTFVGCLRNLKSNNKL 165
F G + +L NK+
Sbjct: 161 AAKEMPPFKGIITDLGYGNKV 181
Score = 143 (55.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 42/145 (28%), Positives = 72/145 (49%)
Query: 31 SIDIKTTSEQDGIIFYVA----DVKH--------IDYVALYVKDGQIHYSFNCGSGPMAL 78
S D +T SE +G+I + D K +D+ A+ + DG ++ + GSG + +
Sbjct: 483 SFDFRT-SEPNGLILFTQGKPQDKKDSRSQRSNKVDFFAVELLDGHLYLLLDMGSGTIKV 541
Query: 79 SSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT 138
+ + DG WH V+ R SG + ++ + S G ++ L++ G YLGG+P N
Sbjct: 542 KATQNKVNDGVWHHVDIQRDGRSGIISVNSRRTPFTAS-GENEILDLEGNLYLGGLPDNR 600
Query: 139 STLVRGN----LGLNDTFVGCLRNL 159
+ L+ LN +VGC+R+L
Sbjct: 601 ADLILPTELWTAMLNYGYVGCIRDL 625
Score = 87 (35.7 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + DG+V ++ G G AI P + F D
Sbjct: 278 EITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DN 336
Query: 268 QWHTIVAIKTKNV 280
WH I T+N+
Sbjct: 337 AWHDIKV--TRNL 347
Score = 80 (33.2 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLIL 86
+ ++ KT +++G+I + K DYV L +KDG + N GSG + +
Sbjct: 278 EITLSFKTW-QRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN 334
Query: 87 DGEWHTVEFSR--QQLSG 102
D WH ++ +R +Q SG
Sbjct: 335 DNAWHDIKVTRNLRQHSG 352
Score = 75 (31.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 24/90 (26%), Positives = 42/90 (46%)
Query: 227 SKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
+K D+F ++++DG + +D G G I T + DG WH + + ++V+
Sbjct: 514 NKVDFFAVELLDGHLYLLLDMGSGTIKVKATQNKVN---DGVWHHVDIQRDGRSGIISVN 570
Query: 287 SMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
S T P G +E D +++GG P
Sbjct: 571 SRRT--P-FTASGENEILDLEGNLYLGGLP 597
Score = 65 (27.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 40/171 (23%), Positives = 74/171 (43%)
Query: 87 DGEWHTVEFSR--QQLSG-------KL------KIDGQVVAEGESKGSSKTLNIFGPFYL 131
D WH ++ +R +Q SG KL +DG + G ++ L FY+
Sbjct: 335 DNAWHDIKVTRNLRQHSGIGHAMVNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYV 394
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNL--KSNN---------KLVQDKHTSSG--VIPC 178
GG P +T+ L G+ +++ F+GCL+ + K+N+ ++ K G V C
Sbjct: 395 GGSP-STADLP-GS-PVSNNFMGCLKEVVYKNNDIRLELSRLARIADPKMKLQGDIVFKC 451
Query: 179 SD-KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
+ T + F + ++ G+ ++ R + D + +GL+L K
Sbjct: 452 ENVPTLDPISFETAESFL-GLPKWNTKRVGSISFDFRTSEPNGLILFTQGK 501
Score = 49 (22.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 20/88 (22%), Positives = 41/88 (46%)
Query: 220 GLLLSVHSKK---DYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK 276
G+L+ + S DY +L + +G V T + G IS ++ DG++H + +
Sbjct: 1132 GILVRIDSAPRLGDYIMLHIEEGKVCVTFNIGTVDISVKEMTTEVN---DGKYHVVRFTR 1188
Query: 277 TKNVISVAVDSMTTDKPGLGPPGSSETD 304
++ VD+ ++ P G+S+ +
Sbjct: 1189 NGGNATLQVDNWPINEHF--PSGNSDIE 1214
>UNIPROTKB|D6RJD2 [details] [associations]
symbol:EGFLAM "Pikachurin" species:9606 "Homo sapiens"
[GO:0005539 "glycosaminoglycan binding" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005614 "interstitial matrix"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IEA] [GO:0019800 "peptide cross-linking via
chondroitin 4-sulfate glycosaminoglycan" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] GO:GO:0030198
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0010811 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0005604 GO:GO:0005614 Pfam:PF02210
HOGENOM:HOG000112344 EMBL:AC010338 EMBL:AC010457 EMBL:AC091839
HGNC:HGNC:26810 ChiTaRS:EGFLAM GO:GO:0005539 GO:GO:0019800
EMBL:AC010351 IPI:IPI00968230 ProteinModelPortal:D6RJD2 SMR:D6RJD2
Ensembl:ENST00000508131 ArrayExpress:D6RJD2 Bgee:D6RJD2
Uniprot:D6RJD2
Length = 112
Score = 156 (60.0 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 35/103 (33%), Positives = 58/103 (56%)
Query: 35 KTTSEQDGIIFYVADVK---HIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWH 91
KTT++ DG++ + D + D+++L ++DG + +S+N GSG ++ DG WH
Sbjct: 4 KTTAK-DGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFN-DGRWH 61
Query: 92 TVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGV 134
V+ R SGK+ +D G+S G + LNI G Y+GG+
Sbjct: 62 RVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGM 104
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 183 (69.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 54/146 (36%), Positives = 74/146 (50%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI V LY G + S++ GS P + + I DG++HTVE
Sbjct: 1078 STAEDNGILLYNGDNDHIA-VELY--QGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1134
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT-STLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1135 VTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFH 1194
Query: 154 GCLRNLKSNNKLVQDKHTSS--GVIP 177
GC+RNL NN+L T GV+P
Sbjct: 1195 GCIRNLYINNELQDFTKTQMKPGVVP 1220
>UNIPROTKB|F1NR94 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR001791 Pfam:PF00054 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250 EMBL:AADN02015251
EMBL:AADN02015252 EMBL:AADN02015253 EMBL:AADN02015254
EMBL:AADN02015255 EMBL:AADN02015256 EMBL:AADN02015257
EMBL:AADN02015258 EMBL:AADN02015259 EMBL:AADN02015260
EMBL:AADN02015261 EMBL:AADN02015262 EMBL:AADN02015263
EMBL:AADN02015264 EMBL:AADN02015265 EMBL:AADN02015266
EMBL:AADN02015267 EMBL:AADN02015268 EMBL:AADN02015269
EMBL:AADN02015270 EMBL:AADN02015271 IPI:IPI00594561
Ensembl:ENSGALT00000037314 ArrayExpress:F1NR94 Uniprot:F1NR94
Length = 666
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/161 (32%), Positives = 80/161 (49%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ + ++ + ++ I T E GI+ Y D HI V LY G++ S+
Sbjct: 507 NKESYLQIPS--AKIHSQTNITLQI-ATDEDSGILLYKGDKDHIA-VELY--RGRVRVSY 560
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE L IDG + TLN P
Sbjct: 561 DTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSIDGGSPKIITNLSKQSTLNFDSPL 620
Query: 130 YLGGVPL-NTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQD 168
Y+GG+P+ N +R + G N T F GC+RNL N++L QD
Sbjct: 621 YVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSEL-QD 660
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 54/146 (36%), Positives = 74/146 (50%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI V LY G + S++ GS P + + I DG++HTVE
Sbjct: 1195 STAEDNGILLYNGDNDHIA-VELY--QGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1251
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT-STLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1252 VAFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTGFH 1311
Query: 154 GCLRNLKSNNKLVQDKHTSS--GVIP 177
GC+RNL NN+L T GV+P
Sbjct: 1312 GCIRNLYINNELQDFTKTQMKPGVVP 1337
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 54/146 (36%), Positives = 74/146 (50%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI V LY G + S++ GS P + + I DG++HTVE
Sbjct: 1192 STAEDNGILLYNGDNDHIA-VELY--QGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1248
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT-STLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1249 VTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFH 1308
Query: 154 GCLRNLKSNNKLVQDKHTSS--GVIP 177
GC+RNL NN+L T GV+P
Sbjct: 1309 GCIRNLYINNELQDFTKTQMKPGVVP 1334
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 54/146 (36%), Positives = 74/146 (50%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI V LY G + S++ GS P + + I DG++HTVE
Sbjct: 1192 STAEDNGILLYNGDNDHIA-VELY--QGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1248
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT-STLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1249 VTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFH 1308
Query: 154 GCLRNLKSNNKLVQDKHTSS--GVIP 177
GC+RNL NN+L T GV+P
Sbjct: 1309 GCIRNLYINNELQDFTKTQMKPGVVP 1334
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 54/146 (36%), Positives = 74/146 (50%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI V LY G + S++ GS P + + I DG++HTVE
Sbjct: 1192 STAEDNGILLYNGDNDHIA-VELY--QGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1248
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT-STLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1249 VTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFH 1308
Query: 154 GCLRNLKSNNKLVQDKHTSS--GVIP 177
GC+RNL NN+L T GV+P
Sbjct: 1309 GCIRNLYINNELQDFTKTQMKPGVVP 1334
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 54/146 (36%), Positives = 74/146 (50%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI V LY G + S++ GS P + + I DG++HTVE
Sbjct: 1195 STAEDNGILLYNGDNDHIA-VELY--QGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1251
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT-STLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1252 VAFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTGFH 1311
Query: 154 GCLRNLKSNNKLVQDKHTSS--GVIP 177
GC+RNL NN+L T GV+P
Sbjct: 1312 GCIRNLYINNELQDFTKTQMKPGVVP 1337
>UNIPROTKB|F1NR89 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0010596 GO:GO:0001933 GO:GO:0071676 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0070100
GO:GO:0090288 GO:GO:0045499 Pfam:PF01463 GO:GO:0010593
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050929
GO:GO:0090024 GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00821752 Ensembl:ENSGALT00000037322 ArrayExpress:F1NR89
Uniprot:F1NR89
Length = 870
Score = 180 (68.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 53/172 (30%), Positives = 84/172 (48%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ + ++ + ++ I T E GI+ Y D HI V LY G++ S+
Sbjct: 507 NKESYLQIPS--AKIHSQTNITLQI-ATDEDSGILLYKGDKDHIA-VELY--RGRVRVSY 560
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE L IDG + TLN P
Sbjct: 561 DTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSIDGGSPKIITNLSKQSTLNFDSPL 620
Query: 130 YLGGVPL-NTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQDKHT--SSGVIP 177
Y+GG+P+ N +R + G N T F GC+RNL N++L ++ G++P
Sbjct: 621 YVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSELQDFRNVPLQVGILP 672
>UNIPROTKB|O75445 [details] [associations]
symbol:USH2A "Usherin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0050953 "sensory perception of light stimulus"
evidence=IMP] [GO:0005518 "collagen binding" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0048496
"maintenance of organ identity" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=ISS]
[GO:0060113 "inner ear receptor cell differentiation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] [GO:0002142 "stereocilia
ankle link complex" evidence=ISS] [GO:0016324 "apical plasma
membrane" evidence=ISS] [GO:0032421 "stereocilium bundle"
evidence=ISS] [GO:0060171 "stereocilium membrane" evidence=ISS]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 Orphanet:791 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 GO:GO:0017022 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113
Pfam:PF02210 GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 EMBL:AL445650 Orphanet:231178
GO:GO:0002142 GO:GO:0048496 EMBL:AC092799 GO:GO:0060171
InterPro:IPR006558 SMART:SM00560 EMBL:AF055580 EMBL:AF091889
EMBL:AF091873 EMBL:AF091875 EMBL:AF091876 EMBL:AF091874
EMBL:AF091877 EMBL:AF091879 EMBL:AF091881 EMBL:AF091883
EMBL:AF091888 EMBL:AF091887 EMBL:AF091886 EMBL:AF091885
EMBL:AF091884 EMBL:AF091882 EMBL:AF091880 EMBL:AF091878
EMBL:AY481573 EMBL:AC138024 EMBL:AL358858 EMBL:AC093581
EMBL:AC119429 EMBL:AL139259 EMBL:AL358452 EMBL:AL513305
IPI:IPI00289540 IPI:IPI00410150 IPI:IPI00741527 RefSeq:NP_009054.5
RefSeq:NP_996816.2 UniGene:Hs.655974 ProteinModelPortal:O75445
STRING:O75445 PhosphoSite:O75445 PaxDb:O75445 PRIDE:O75445
Ensembl:ENST00000307340 Ensembl:ENST00000366942
Ensembl:ENST00000366943 GeneID:7399 KEGG:hsa:7399 UCSC:uc001hku.1
UCSC:uc001hkv.3 CTD:7399 GeneCards:GC01M215796 H-InvDB:HIX0028527
HGNC:HGNC:12601 MIM:276901 MIM:608400 MIM:613809 neXtProt:NX_O75445
PharmGKB:PA37228 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 GenomeRNAi:7399
NextBio:28962 Bgee:O75445 CleanEx:HS_USH2A Genevestigator:O75445
GermOnline:ENSG00000042781 InterPro:IPR026915
PANTHER:PTHR10574:SF53 Uniprot:O75445
Length = 5202
Score = 188 (71.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 72/329 (21%), Positives = 137/329 (41%)
Query: 16 EYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSG 74
++P+ T F +T + I+F + +Y AL +K G++++ F+
Sbjct: 1529 KFPSSTHPVNTDFTGIKASFRTKVPEGLIVFAASPGNQEEYFALQLKKGRLYFLFDPQGS 1588
Query: 75 PMALSSGD---KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
P+ +++ + K DG+WH + R Q G++ +DG S + +L
Sbjct: 1589 PVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLDGIYTGSSAILNGSTVIGDNTGVFL 1648
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRN---LKSNNKLV----QDKHTSSGVIP------- 177
GG+P + + L + + FVGCL++ +K+ N D +S I
Sbjct: 1649 GGLPRSYTILRKDPEIIQKGFVGCLKDVHFMKNYNPSAIWEPLDWQSSEEQINVYNSWEG 1708
Query: 178 CSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK--DYFILQ 235
C G F +G F G E+ + ++GLLL V++K D+ ++
Sbjct: 1709 CPASLNEGAQFLGAGFLELHPYMFHGGMNFEISFKFRTDQLNGLLLFVYNKDGPDFLAME 1768
Query: 236 MIDGSVKATVDNGKGPISAIYTPSDPYF---FCDGQWHTIVAIKTKNVISVAVDSMTTDK 292
+ G + ++ S +T D +C+G+W+ ++ K + IS +V+ +
Sbjct: 1769 LKSGILTFRLNT-----SLAFTQVDLLLGLSYCNGKWNKVIIKKEGSFISASVNGLMKHA 1823
Query: 293 PGLGPPGSSETDTNNAVFIGGHPFLSLSS 321
G N+ V++GG P L+S
Sbjct: 1824 ---SESGDQPLVVNSPVYVGGIPQELLNS 1849
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 181 (68.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 46/146 (31%), Positives = 76/146 (52%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y +HI A+ + DG + +++ G P + +++ DG++HTVE
Sbjct: 1189 STAEDNGILLYNGVNEHI---AVELHDGHVKVTYDAGRQPGSTIYSSEIVNDGQFHTVEL 1245
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLG-LN-DTFV 153
+ L IDG + +S G + L P Y+GG+P N +L + +N +F
Sbjct: 1246 VTYERMVNLSIDGGLPTTLDSSGHIQPLTRDAPLYVGGMPENAKSLSSNHWPPVNGSSFQ 1305
Query: 154 GCLRNLKSNNKLVQDKHTSS--GVIP 177
GC+RNL NN+L T GV+P
Sbjct: 1306 GCIRNLYINNELQDFTQTQMKPGVVP 1331
>UNIPROTKB|F1MER7 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005615 GO:GO:0008104 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0048704 GO:GO:0002062 GO:GO:0001958 Pfam:PF02210
GO:GO:0060351 Pfam:PF12661 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 OMA:GVTQQCA
EMBL:DAAA02006470 EMBL:DAAA02006471 IPI:IPI01000857 IntAct:F1MER7
Ensembl:ENSBTAT00000022744 Uniprot:F1MER7
Length = 4374
Score = 185 (70.2 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 39/106 (36%), Positives = 60/106 (56%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
D+++L ++DG + +S+ GSG L S D I DGEWH V R+ G +++DG+ +
Sbjct: 4241 DFISLGLQDGHLVFSYQLGSGEARLVSEDP-INDGEWHRVTALREGQRGSIQVDGEELVS 4299
Query: 114 GESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNL 159
G+S G + +N G Y+GG P N + L G T GC++NL
Sbjct: 4300 GQSPGPNVAVNTKGSIYVGGAP-NVAVLTGGRFSSGIT--GCIKNL 4342
Score = 145 (56.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 48/182 (26%), Positives = 80/182 (43%)
Query: 6 IAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHI--DYVALYVKDG 63
++GT S + P +T ++ ++ K + DG++ + D+V+L + G
Sbjct: 3915 LSGTD--SYLALPALTNTH-HELRLDVEFKPLAP-DGVLLFSGGKSGPVEDFVSLAMVGG 3970
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTL 123
+ + + GSG L S + L L G WH V R G L+++G S G S+ L
Sbjct: 3971 HLEFRYELGSGLAVLRSAEPLAL-GRWHHVSAERLNKDGSLQVNGGRPVLRSSPGKSQGL 4029
Query: 124 NIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT---SSGVIPCSD 180
N+ YLGGV N+ + F GC+ + N K + ++ S GV C D
Sbjct: 4030 NLHTLLYLGGVEPAVQLPPATNVSAH--FHGCVGEVSVNGKRLDLTYSFLGSQGVGQCYD 4087
Query: 181 KT 182
+
Sbjct: 4088 SS 4089
Score = 140 (54.3 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 48/180 (26%), Positives = 85/180 (47%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFY---------VADV--KHIDYVALYVK 61
S + PTI ++ KF+ I + S DG++ Y A++ + D+++ +
Sbjct: 3655 SFLPLPTIKDAYR-KFEIKITFRPDSA-DGMLLYNGQKQIPGSPANLANRQPDFISFGLV 3712
Query: 62 DGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSK 121
G+ + F+ GSG + L L G++HTV R G L + G S+G +
Sbjct: 3713 GGRPEFRFDAGSGMATIRHPTPLAL-GQFHTVTLLRSLTQGSLIVGSLAPVNGTSQGKFQ 3771
Query: 122 TLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLK-SNNKLV-QDKH-TSSGVIPC 178
L++ YLGG P + + + GL+ F+GC+R L+ ++V D + T+ G+ C
Sbjct: 3772 GLDLNEELYLGGYP-DYGAIPKA--GLSSGFIGCVRELRIQGEEIVFHDLNLTAHGISHC 3828
Score = 94 (38.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 36/141 (25%), Positives = 62/141 (43%)
Query: 185 GVFFYNSGGYVKGVEQF-RVGREME--LKMDVKPRNISGLLLSVHSK-------KDYFIL 234
G +FY++G F R E+ ++++V+ SGLL+ + KD+ L
Sbjct: 4186 GAYFYDNGFLALPGRIFSRSLPEVPETIELEVRTSTASGLLVWQGEETGQSGRGKDFISL 4245
Query: 235 QMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPG 294
+ DG + + G G A DP DG+WH + A++ S+ VD G
Sbjct: 4246 GLQDGHLVFSYQLGSG--EARLVSEDP--INDGEWHRVTALREGQRGSIQVDGEELVS-G 4300
Query: 295 LGPPGSSETDTNNAVFIGGHP 315
P + +T ++++GG P
Sbjct: 4301 QSPGPNVAVNTKGSIYVGGAP 4321
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 180 (68.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 53/146 (36%), Positives = 74/146 (50%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI V LY G + S++ GS P + + I DG++HTVE
Sbjct: 1058 STAEDNGILLYNGDNDHIA-VELY--QGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1114
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT-STLVRGNLGLN-DTFV 153
L IDG ++ G TLN P Y+GG+P++ S R LN +F
Sbjct: 1115 VTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGSSFH 1174
Query: 154 GCLRNLKSNNKLVQDKHT--SSGVIP 177
GC+RNL NN+L T GV+P
Sbjct: 1175 GCIRNLYINNELQDFTKTRMKPGVVP 1200
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 180 (68.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 53/172 (30%), Positives = 84/172 (48%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ + ++ + ++ I T E GI+ Y D HI V LY G++ S+
Sbjct: 1062 NKESYLQIPS--AKIHSQTNITLQI-ATDEDSGILLYKGDKDHIA-VELY--RGRVRVSY 1115
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE L IDG + TLN P
Sbjct: 1116 DTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSIDGGSPKIITNLSKQSTLNFDSPL 1175
Query: 130 YLGGVPL-NTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQDKHT--SSGVIP 177
Y+GG+P+ N +R + G N T F GC+RNL N++L ++ G++P
Sbjct: 1176 YVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSELQDFRNVPLQVGILP 1227
>UNIPROTKB|P98160 [details] [associations]
symbol:HSPG2 "Basement membrane-specific heparan sulfate
proteoglycan core protein" species:9606 "Homo sapiens" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006024 "glycosaminoglycan biosynthetic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0042157
"lipoprotein metabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
Reactome:REACT_111217 InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005886 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0008104
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0005975 GO:GO:0070062 InterPro:IPR003598 SMART:SM00408
DrugBank:DB00102 GO:GO:0006629 GO:GO:0030198 GO:GO:0001525
GO:GO:0042157 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0043202
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0005796 GO:GO:0030204 GO:GO:0006024 GO:GO:0006027
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 Pfam:PF12661 EMBL:AL590556
DrugBank:DB00039 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 EMBL:AL590103 EMBL:M85289 EMBL:X62515
EMBL:L22078 EMBL:AL445795 EMBL:S76436 EMBL:M64283 IPI:IPI00024284
PIR:A38096 RefSeq:NP_005520.4 UniGene:Hs.562227 PDB:3SH4 PDB:3SH5
PDBsum:3SH4 PDBsum:3SH5 ProteinModelPortal:P98160 SMR:P98160
IntAct:P98160 MINT:MINT-123304 STRING:P98160 PhosphoSite:P98160
DMDM:218512120 DOSAC-COBS-2DPAGE:P98160 PaxDb:P98160 PRIDE:P98160
Ensembl:ENST00000374695 GeneID:3339 KEGG:hsa:3339 UCSC:uc001bfj.3
CTD:3339 GeneCards:GC01M022148 H-InvDB:HIX0023554
H-InvDB:HIX0023598 HGNC:HGNC:5273 HPA:CAB009820 HPA:CAB020718
HPA:HPA018892 MIM:142461 MIM:224410 MIM:255800 neXtProt:NX_P98160
Orphanet:1865 Orphanet:800 PharmGKB:PA29537 eggNOG:NOG258321
HOGENOM:HOG000049276 HOVERGEN:HBG008174 InParanoid:P98160 KO:K06255
OMA:GVTQQCA OrthoDB:EOG44QT00 ChiTaRS:HSPG2 GenomeRNAi:3339
NextBio:13216 ArrayExpress:P98160 Bgee:P98160 CleanEx:HS_HSPG2
Genevestigator:P98160 GermOnline:ENSG00000142798 Uniprot:P98160
Length = 4391
Score = 177 (67.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 38/106 (35%), Positives = 59/106 (55%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
D+++L ++DG + + + GSG L S D I DGEWH V R+ G +++DG+ +
Sbjct: 4258 DFISLGLQDGHLVFRYQLGSGEARLVSEDP-INDGEWHRVTALREGRRGSIQVDGEELVS 4316
Query: 114 GESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNL 159
G S G + +N G Y+GG P + +TL G T GC++NL
Sbjct: 4317 GRSPGPNVAVNAKGSVYIGGAP-DVATLTGGRFSSGIT--GCVKNL 4359
Score = 147 (56.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 45/175 (25%), Positives = 77/175 (44%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHI--DYVALYVKDGQIHYSFN 70
S + P +T ++ ++ K + DG++ + D+V+L + G + + +
Sbjct: 3937 SYLALPALTNTH-HELRLDVEFKPLAP-DGVLLFSGGKSGPVEDFVSLAMVGGHLEFRYE 3994
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFY 130
GSG L S + L L G WH V R G L+++G S G S+ LN+ Y
Sbjct: 3995 LGSGLAVLRSAEPLAL-GRWHRVSAERLNKDGSLRVNGGRPVLRSSPGKSQGLNLHTLLY 4053
Query: 131 LGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT---SSGVIPCSDKT 182
LGGV + N+ + F GC+ + N K + ++ S G+ C D +
Sbjct: 4054 LGGVEPSVPLSPATNMSAH--FRGCVGEVSVNGKRLDLTYSFLGSQGIGQCYDSS 4106
Score = 135 (52.6 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 47/180 (26%), Positives = 81/180 (45%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK-----------HIDYVALYVK 61
S + PTI ++ KF+ I + S DG++ Y + D+++ +
Sbjct: 3672 SFLPLPTIKDAYR-KFEIKITFRPDSA-DGMLLYNGQKRVPGSPTNLANRQPDFISFGLV 3729
Query: 62 DGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSK 121
G+ + F+ GSG + L L G +HTV R G L + G S+G +
Sbjct: 3730 GGRPEFRFDAGSGMATIRHPTPLAL-GHFHTVTLLRSLTQGSLIVGDLAPVNGTSQGKFQ 3788
Query: 122 TLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLK-SNNKLV-QDKH-TSSGVIPC 178
L++ YLGG P + + + GL+ F+GC+R L+ ++V D + T+ G+ C
Sbjct: 3789 GLDLNEELYLGGYP-DYGAIPKA--GLSSGFIGCVRELRIQGEEIVFHDLNLTAHGISHC 3845
Score = 92 (37.4 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 39/143 (27%), Positives = 58/143 (40%)
Query: 185 GVFFYNSG-----GYVKGVEQFRVGREMELKMDVKPRNISGLLL-------SVHSKKDYF 232
G +F++ G G+V V +EL +V+ SGLLL KD+
Sbjct: 4203 GAYFHDDGFLAFPGHVFSRSLPEVPETIEL--EVRTSTASGLLLWQGVEVGEAGQGKDFI 4260
Query: 233 ILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDK 292
L + DG + G G A DP DG+WH + A++ S+ VD
Sbjct: 4261 SLGLQDGHLVFRYQLGSG--EARLVSEDP--INDGEWHRVTALREGRRGSIQVDGEELVS 4316
Query: 293 PGLGPPGSSETDTNNAVFIGGHP 315
G P + + +V+IGG P
Sbjct: 4317 -GRSPGPNVAVNAKGSVYIGGAP 4338
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 180 (68.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 53/172 (30%), Positives = 84/172 (48%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ + ++ + ++ I T E GI+ Y D HI V LY G++ S+
Sbjct: 1162 NKESYLQIPS--AKIHSQTNITLQI-ATDEDSGILLYKGDKDHIA-VELY--RGRVRVSY 1215
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE L IDG + TLN P
Sbjct: 1216 DTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSIDGGSPKIITNLSKQSTLNFDSPL 1275
Query: 130 YLGGVPL-NTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQDKHT--SSGVIP 177
Y+GG+P+ N +R + G N T F GC+RNL N++L ++ G++P
Sbjct: 1276 YVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSELQDFRNVPLQVGILP 1327
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 180 (68.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 53/146 (36%), Positives = 74/146 (50%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D H+ V LY G + S++ GS P + + I DG++HTVE
Sbjct: 1195 STAEDNGILLYNGDNDHMA-VELY--QGHVRVSYDPGSYPSSAIYSAETINDGQFHTVEL 1251
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT-STLVRGNLGLNDT-FV 153
L IDG ++ G TLN P Y+GG+P++ S R LN T F
Sbjct: 1252 VTFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFH 1311
Query: 154 GCLRNLKSNNKLVQDKHT--SSGVIP 177
GC+RNL NN+L T GV+P
Sbjct: 1312 GCIRNLYINNELQDFTKTRMKPGVVP 1337
>UNIPROTKB|E1BP05 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060171 "stereocilium membrane" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0035315 "hair cell differentiation" evidence=IEA] [GO:0017022
"myosin binding" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0002142 "stereocilia ankle link complex"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0005604 GO:GO:0060113 Pfam:PF02210 GO:GO:0032421
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0002142 GO:GO:0048496 GeneTree:ENSGT00700000104042
InterPro:IPR006558 SMART:SM00560 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:DAAA02042466 EMBL:DAAA02042467
EMBL:DAAA02042468 EMBL:DAAA02042469 EMBL:DAAA02042470
EMBL:DAAA02042471 EMBL:DAAA02042472 EMBL:DAAA02042473
EMBL:DAAA02042474 EMBL:DAAA02042475 EMBL:DAAA02042476
EMBL:DAAA02042477 EMBL:DAAA02042478 EMBL:DAAA02042479
EMBL:DAAA02042480 EMBL:DAAA02042481 EMBL:DAAA02042482
EMBL:DAAA02042483 IPI:IPI00924139 Ensembl:ENSBTAT00000061112
Uniprot:E1BP05
Length = 5204
Score = 185 (70.2 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 67/320 (20%), Positives = 135/320 (42%)
Query: 16 EYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC-GS 73
++P+ T F +T + I+F + +Y A+ +K+G+ ++ F+ GS
Sbjct: 1529 KFPSSTHPVNTDFTGIKASFRTRVPEGLIVFAASPGNQEEYFAIQLKNGRPYFLFDPQGS 1588
Query: 74 GPMALSSGD--KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
++ D K DG+WH + R Q G++ +DG + + ++
Sbjct: 1589 AVEVTTTNDDGKQYSDGKWHEIIAIRHQGLGQITLDGLFTGSSATTNGGTVIGENTGVFV 1648
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRN---LKSNNK------LV-QDKHTSSGVIP---- 177
GG+P + L + + + FVGCL++ +K+ N LV Q + V
Sbjct: 1649 GGLPQGYTILRKDSDIVQKGFVGCLKDVYFMKNYNPSATWEHLVWQSSEEQTNVHNDWEG 1708
Query: 178 CSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK--DYFILQ 235
C + G F +G F G + E+ + ++GLLL +++K D+ ++
Sbjct: 1709 CPTSLQEGAQFLGTGFLELYPYLFHGGMDFEISFKFRTDQLNGLLLFIYNKDGPDFLAME 1768
Query: 236 MIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGL 295
+ G + ++ P Y CDG+W+ ++ K ++IS +++ + +
Sbjct: 1769 LKSGILSFRLNTSLTFTQVDLWPGLSY--CDGKWNKVIIKKNDSIISASMNELMEH---V 1823
Query: 296 GPPGSSETDTNNAVFIGGHP 315
+ N+ V++GG P
Sbjct: 1824 SESRAQALMVNSPVYVGGIP 1843
>WB|WBGene00006787 [details] [associations]
symbol:unc-52 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IGI;IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0061199 "striated muscle contraction involved in
embryonic body morphogenesis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IGI] [GO:0016477 "cell
migration" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0040017
"positive regulation of locomotion" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 183 (69.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/173 (28%), Positives = 93/173 (53%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVAD---VKHI-DYVALYVKDGQIHYSFNC 71
E+P +T K++ + KT +Q+G++ + V+ + DY+++ + +G +H+S+
Sbjct: 3197 EFPHLTSE-KDEI-VAFKFKT-EQQNGVLLWQGQRPTVQQMEDYISVGIVNGHLHFSYEL 3253
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
G G L S ++ + DG+ H+V F R+ G+++ID +G S G LN+ G ++
Sbjct: 3254 GGGAAHLISEER-VDDGKEHSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDGNIFV 3312
Query: 132 GGVP-LNTSTLVRGNLGLNDTFVGCLRNLKSNN---KLVQDKHTSSGVIPCSD 180
GGVP ++ +T G L N+ FVGC+ +++ N L+ V PC +
Sbjct: 3313 GGVPDISKAT---GGLFSNN-FVGCIADVELNGVKLDLMATAIDGKNVKPCDE 3361
>UNIPROTKB|Q06561 [details] [associations]
symbol:unc-52 "Basement membrane proteoglycan" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030239 "myofibril assembly" evidence=IEP]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 183 (69.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/173 (28%), Positives = 93/173 (53%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVAD---VKHI-DYVALYVKDGQIHYSFNC 71
E+P +T K++ + KT +Q+G++ + V+ + DY+++ + +G +H+S+
Sbjct: 3197 EFPHLTSE-KDEI-VAFKFKT-EQQNGVLLWQGQRPTVQQMEDYISVGIVNGHLHFSYEL 3253
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
G G L S ++ + DG+ H+V F R+ G+++ID +G S G LN+ G ++
Sbjct: 3254 GGGAAHLISEER-VDDGKEHSVRFERKGREGQMRIDNYREVDGRSTGILAMLNVDGNIFV 3312
Query: 132 GGVP-LNTSTLVRGNLGLNDTFVGCLRNLKSNN---KLVQDKHTSSGVIPCSD 180
GGVP ++ +T G L N+ FVGC+ +++ N L+ V PC +
Sbjct: 3313 GGVPDISKAT---GGLFSNN-FVGCIADVELNGVKLDLMATAIDGKNVKPCDE 3361
>RGD|620212 [details] [associations]
symbol:Nrxn3 "neurexin 3" species:10116 "Rattus norvegicus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005246 "calcium
channel regulator activity" evidence=ISO] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IEA;ISO] [GO:0007269
"neurotransmitter secretion" evidence=ISO] [GO:0007416 "synapse
assembly" evidence=IEA;ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 RGD:620212 GO:GO:0016021 GO:GO:0005886
GO:GO:0005576 GO:GO:0046872 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 PROSITE:PS01186 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007269
GO:GO:0005246 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
eggNOG:NOG302266 HOGENOM:HOG000230481 HOVERGEN:HBG052670 KO:K07377
OrthoDB:EOG41G339 CTD:9369 PANTHER:PTHR10127:SF405 EMBL:L14851
IPI:IPI00476688 IPI:IPI00829422 IPI:IPI00829428 IPI:IPI00829441
IPI:IPI00829447 IPI:IPI00829448 IPI:IPI00829450 IPI:IPI00829453
IPI:IPI00829456 IPI:IPI00829461 IPI:IPI00829465 IPI:IPI00829472
IPI:IPI00829491 IPI:IPI00829492 IPI:IPI00829495 IPI:IPI00829499
IPI:IPI00829500 IPI:IPI00829503 IPI:IPI00829509 PIR:I48216
RefSeq:NP_446269.2 UniGene:Rn.10926 ProteinModelPortal:Q07310
SMR:Q07310 STRING:Q07310 PhosphoSite:Q07310 PRIDE:Q07310
GeneID:116508 KEGG:rno:116508 UCSC:RGD:620212 NextBio:619125
ArrayExpress:Q07310 Genevestigator:Q07310
GermOnline:ENSRNOG00000024722 Uniprot:Q07310
Length = 1578
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS I+F D + ++A+ + G IHY F
Sbjct: 881 TKSSYLTLATLQAYTSMHLFFQF--KTTSADGFILFNSGDGNN--FIAVELVKGYIHYVF 936
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSG-KLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + D+ + D +WH V +R + LK+D +VV + + +K L++ G
Sbjct: 937 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVIN--GAKNLDLKG 994
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL---VQDKHTSSGVI 176
Y+ G+ + + + D F GCL ++ N +L + D SG I
Sbjct: 995 DLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQI 1046
Score = 155 (59.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 77/287 (26%), Positives = 115/287 (40%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 709 EAEDVSFRFMSQRAYGLLVATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNS 762
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D V AEG G L F+
Sbjct: 763 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLTVDDDV-AEGTMVGDHTRLE----FH- 815
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 816 -NIETGIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIA 874
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFI-LQMIDGSVK 242
V F Y+ + + M L K + G +L + FI ++++ G +
Sbjct: 875 DPVTFKTKSSYLT-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGNNFIAVELVKGYIH 933
Query: 243 ATVDNGKGPISAIYTPSD-PYFFCDGQWHTIVAIK-TKNVISVAVDS 287
D G GP + I SD P D QWH +V + N S+ VD+
Sbjct: 934 YVFDLGNGP-NVIKGNSDRP--LNDNQWHNVVITRDNSNTHSLKVDT 977
Score = 154 (59.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 51/177 (28%), Positives = 86/177 (48%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I DV+ +D+ A+ + DG ++ + G
Sbjct: 470 KRMGSISFDFRTT-EPNGLILLTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMG 528
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLG
Sbjct: 529 SGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GQSEILDLEGDMYLG 587
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGV-IPCS 179
G+P N + L+ LN +VGC+R+L +S N + + + ++GV CS
Sbjct: 588 GLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCS 644
Score = 125 (49.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 39/139 (28%), Positives = 66/139 (47%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG--QIHYSFNCGSGPMALSSGDKLIL 86
D S KT + G++ Y+ D D++ L + DG Q+ +S +C + LS+ K +
Sbjct: 50 DLSFQFKT-NVSTGLLLYLDDGGVCDFLCLSLVDGRVQLRFSMDCAETTV-LSN--KQVN 105
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRG 144
D WH + SR ++ L IDG+ + GE + +++ +LGG P + S L
Sbjct: 106 DSSWHFLMVSRDRVRTGLVIDGEGQS-GELRAQRPYMDVVSDLFLGGGPADIRPSALTLD 164
Query: 145 NLGLNDTFVGCLRNLKSNN 163
+ F G + +LK N
Sbjct: 165 GVQNMPGFKGLMLDLKYGN 183
Score = 122 (48.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 51/216 (23%), Positives = 94/216 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLIL 86
+ ++ KT +++G+I + K DYV L +KDG + N GSG + +
Sbjct: 286 EITLSFKTW-QRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN 342
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
D WH V+ +R + +DG + G ++ L Y+G P +T+ L G+
Sbjct: 343 DNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDSSYVGPSP-STADLP-GS- 399
Query: 147 GLNDTFVGCLRNL--KSNN-KLVQDKHTSSG----------VIPCSD-KTESGVFFYNSG 192
+++ F+GCL+ + K+N+ +L + G V C + T + F
Sbjct: 400 PVSNNFMGCLKEVVYKNNDIRLELSRLARIGATKMKIYGEVVFKCENVATLDPINFETPE 459
Query: 193 GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
Y+ + ++ R + D + +GL+L H K
Sbjct: 460 AYIS-LPKWNTKRMGSISFDFRTTEPNGLILLTHGK 494
Score = 105 (42.0 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + DG+V ++ G G AI P + F D
Sbjct: 286 EITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DN 344
Query: 268 QWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
WH + + ++++VD + T G + ++++ ++G P
Sbjct: 345 AWHDVKVTRNLRQVTISVDGILTTT-GYTQEDYTMLGSDDSSYVGPSP 391
Score = 86 (35.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KP+ + ++K D+F ++++DG++ +D G G I T DG+W+ +
Sbjct: 494 KPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKAN---DGEWYHVD 550
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+S T P G SE D +++GG P
Sbjct: 551 IQRDGRSGTISVNSRRT--P-FTASGQSEILDLEGDMYLGGLP 590
Score = 57 (25.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 40/185 (21%), Positives = 75/185 (40%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNIS--- 219
N+ + D T +G + + E+ + Y+ Y+K + + E E DV R +S
Sbjct: 667 NRFICDC-TGTGYWGRTCEREASILSYDGSMYMKVIMPMVMHTEAE---DVSFRFMSQRA 722
Query: 220 -GLLLSVHSKK--DYFILQMIDGSVKATV--DNGKGPISAIYTPSDPYF---FCDGQWHT 271
GLL++ S+ D L++ G VK V D + ++ P Y D +WHT
Sbjct: 723 YGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHT 782
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRR 331
+ ++ + + VD D +G H L + ++G T++R
Sbjct: 783 VRVVRRGKSLKLTVDD----------------DVAEGTMVGDHTRLEFHNIETGIMTEKR 826
Query: 332 SVFLI 336
+ ++
Sbjct: 827 YISVV 831
>UNIPROTKB|Q07310 [details] [associations]
symbol:Nrxn3 "Neurexin-3" species:10116 "Rattus norvegicus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007416 "synapse assembly"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 RGD:620212 GO:GO:0016021 GO:GO:0005886
GO:GO:0005576 GO:GO:0046872 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 PROSITE:PS01186 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007269
GO:GO:0005246 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
eggNOG:NOG302266 HOGENOM:HOG000230481 HOVERGEN:HBG052670 KO:K07377
OrthoDB:EOG41G339 CTD:9369 PANTHER:PTHR10127:SF405 EMBL:L14851
IPI:IPI00476688 IPI:IPI00829422 IPI:IPI00829428 IPI:IPI00829441
IPI:IPI00829447 IPI:IPI00829448 IPI:IPI00829450 IPI:IPI00829453
IPI:IPI00829456 IPI:IPI00829461 IPI:IPI00829465 IPI:IPI00829472
IPI:IPI00829491 IPI:IPI00829492 IPI:IPI00829495 IPI:IPI00829499
IPI:IPI00829500 IPI:IPI00829503 IPI:IPI00829509 PIR:I48216
RefSeq:NP_446269.2 UniGene:Rn.10926 ProteinModelPortal:Q07310
SMR:Q07310 STRING:Q07310 PhosphoSite:Q07310 PRIDE:Q07310
GeneID:116508 KEGG:rno:116508 UCSC:RGD:620212 NextBio:619125
ArrayExpress:Q07310 Genevestigator:Q07310
GermOnline:ENSRNOG00000024722 Uniprot:Q07310
Length = 1578
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS I+F D + ++A+ + G IHY F
Sbjct: 881 TKSSYLTLATLQAYTSMHLFFQF--KTTSADGFILFNSGDGNN--FIAVELVKGYIHYVF 936
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSG-KLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + D+ + D +WH V +R + LK+D +VV + + +K L++ G
Sbjct: 937 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVIN--GAKNLDLKG 994
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL---VQDKHTSSGVI 176
Y+ G+ + + + D F GCL ++ N +L + D SG I
Sbjct: 995 DLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQI 1046
Score = 155 (59.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 77/287 (26%), Positives = 115/287 (40%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 709 EAEDVSFRFMSQRAYGLLVATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNS 762
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D V AEG G L F+
Sbjct: 763 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLTVDDDV-AEGTMVGDHTRLE----FH- 815
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 816 -NIETGIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIA 874
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFI-LQMIDGSVK 242
V F Y+ + + M L K + G +L + FI ++++ G +
Sbjct: 875 DPVTFKTKSSYLT-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGNNFIAVELVKGYIH 933
Query: 243 ATVDNGKGPISAIYTPSD-PYFFCDGQWHTIVAIK-TKNVISVAVDS 287
D G GP + I SD P D QWH +V + N S+ VD+
Sbjct: 934 YVFDLGNGP-NVIKGNSDRP--LNDNQWHNVVITRDNSNTHSLKVDT 977
Score = 154 (59.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 51/177 (28%), Positives = 86/177 (48%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I DV+ +D+ A+ + DG ++ + G
Sbjct: 470 KRMGSISFDFRTT-EPNGLILLTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMG 528
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLG
Sbjct: 529 SGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GQSEILDLEGDMYLG 587
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGV-IPCS 179
G+P N + L+ LN +VGC+R+L +S N + + + ++GV CS
Sbjct: 588 GLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCS 644
Score = 125 (49.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 39/139 (28%), Positives = 66/139 (47%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG--QIHYSFNCGSGPMALSSGDKLIL 86
D S KT + G++ Y+ D D++ L + DG Q+ +S +C + LS+ K +
Sbjct: 50 DLSFQFKT-NVSTGLLLYLDDGGVCDFLCLSLVDGRVQLRFSMDCAETTV-LSN--KQVN 105
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRG 144
D WH + SR ++ L IDG+ + GE + +++ +LGG P + S L
Sbjct: 106 DSSWHFLMVSRDRVRTGLVIDGEGQS-GELRAQRPYMDVVSDLFLGGGPADIRPSALTLD 164
Query: 145 NLGLNDTFVGCLRNLKSNN 163
+ F G + +LK N
Sbjct: 165 GVQNMPGFKGLMLDLKYGN 183
Score = 122 (48.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 51/216 (23%), Positives = 94/216 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLIL 86
+ ++ KT +++G+I + K DYV L +KDG + N GSG + +
Sbjct: 286 EITLSFKTW-QRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN 342
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
D WH V+ +R + +DG + G ++ L Y+G P +T+ L G+
Sbjct: 343 DNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDSSYVGPSP-STADLP-GS- 399
Query: 147 GLNDTFVGCLRNL--KSNN-KLVQDKHTSSG----------VIPCSD-KTESGVFFYNSG 192
+++ F+GCL+ + K+N+ +L + G V C + T + F
Sbjct: 400 PVSNNFMGCLKEVVYKNNDIRLELSRLARIGATKMKIYGEVVFKCENVATLDPINFETPE 459
Query: 193 GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
Y+ + ++ R + D + +GL+L H K
Sbjct: 460 AYIS-LPKWNTKRMGSISFDFRTTEPNGLILLTHGK 494
Score = 105 (42.0 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + DG+V ++ G G AI P + F D
Sbjct: 286 EITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DN 344
Query: 268 QWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
WH + + ++++VD + T G + ++++ ++G P
Sbjct: 345 AWHDVKVTRNLRQVTISVDGILTTT-GYTQEDYTMLGSDDSSYVGPSP 391
Score = 86 (35.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KP+ + ++K D+F ++++DG++ +D G G I T DG+W+ +
Sbjct: 494 KPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKAN---DGEWYHVD 550
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+S T P G SE D +++GG P
Sbjct: 551 IQRDGRSGTISVNSRRT--P-FTASGQSEILDLEGDMYLGGLP 590
Score = 57 (25.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 40/185 (21%), Positives = 75/185 (40%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNIS--- 219
N+ + D T +G + + E+ + Y+ Y+K + + E E DV R +S
Sbjct: 667 NRFICDC-TGTGYWGRTCEREASILSYDGSMYMKVIMPMVMHTEAE---DVSFRFMSQRA 722
Query: 220 -GLLLSVHSKK--DYFILQMIDGSVKATV--DNGKGPISAIYTPSDPYF---FCDGQWHT 271
GLL++ S+ D L++ G VK V D + ++ P Y D +WHT
Sbjct: 723 YGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHT 782
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRR 331
+ ++ + + VD D +G H L + ++G T++R
Sbjct: 783 VRVVRRGKSLKLTVDD----------------DVAEGTMVGDHTRLEFHNIETGIMTEKR 826
Query: 332 SVFLI 336
+ ++
Sbjct: 827 YISVV 831
>ZFIN|ZDB-GENE-060503-794 [details] [associations]
symbol:ush2a "Usher syndrome 2A (autosomal
recessive, mild)" species:7955 "Danio rerio" [GO:0042462 "eye
photoreceptor cell development" evidence=IGI] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-060503-794
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0042462 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AL845481 EMBL:CT027582 EMBL:AL928842
EMBL:AL929128 IPI:IPI00882773 UniGene:Dr.118940 UniGene:Dr.158626
Ensembl:ENSDART00000086201 InParanoid:Q1MTD2 Uniprot:Q1MTD2
Length = 5236
Score = 143 (55.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 39/156 (25%), Positives = 76/156 (48%)
Query: 12 SSRIEYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
S +P+ T F + +T +E+ ++F V+ + +YVAL + +G+ ++ F+
Sbjct: 1543 SGFFRFPSATLPVNADFTGLQLSFRTRAEEGLLLFAVSPGEQEEYVALQIHNGRPYFLFD 1602
Query: 71 CGSGPMALS---SGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ +ALS G + D +WH + +R+Q G + +D Q + S +
Sbjct: 1603 PQASAVALSPRNDGGRRYNDNQWHHLIATRKQAVGTIIVDNQYSGSASATSGSTIIGQNT 1662
Query: 128 PFYLGGVPLNTSTLVRGNLG----LNDTFVGCLRNL 159
++GG+P N T++R + G + F GCLR++
Sbjct: 1663 GVFIGGIPENF-TILRQDAGQAKLVQQGFAGCLRDV 1697
Score = 96 (38.9 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 36/142 (25%), Positives = 61/142 (42%)
Query: 178 CSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHS--KKDYFILQ 235
C +E+G +F G E G E+ + K ++ LLL + KD FIL
Sbjct: 1730 CPAVSENGAYFLGHGFLKVKPEILTGGNYFEISFEFKTDQLNALLLFAYDIDGKD-FILA 1788
Query: 236 MIDGSVKATVDN-GKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSM-TTDKP 293
+ G V V G+ + Y CDG W+T+ +K ++ S ++ M ++
Sbjct: 1789 ELQGGVLFWVLRWGEQTVELSVWVGLSY--CDGGWNTLSVLKRGHLASAGLNDMYEQERK 1846
Query: 294 GLGPPGSSETDTNNAVFIGGHP 315
+G P ++ ++IGG P
Sbjct: 1847 AIGGP----LTISSPLYIGGVP 1864
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 170 HTSSGVIPCSDKTESGVFFYNSGGYVKG 197
HT SG++P + + + + GG+V G
Sbjct: 2784 HTVSGLMPYTGYSITILACSGGGGHVGG 2811
>UNIPROTKB|F1S5C4 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:CU929485
Ensembl:ENSSSCT00000009572 OMA:XVETIND Uniprot:F1S5C4
Length = 1045
Score = 176 (67.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 53/173 (30%), Positives = 84/173 (48%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ + + + + ++ I T E GI+ Y D HI V LY G++ S+
Sbjct: 681 NKESYLQIPS--AKVRPQTNITLQI-ATDEDSGILLYKGDKDHIA-VELY--RGRVRASY 734
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE S L +DG + TLN P
Sbjct: 735 DTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNFDSPL 794
Query: 130 YLGGVP--LNTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQDKHT--SSGVIP 177
Y+GG+P N + +R G N T F GC+RNL N++L + +G++P
Sbjct: 795 YVGGMPGKNNVAAALRQAPGHNGTSFHGCIRNLYINSELQDFRKVPMQTGILP 847
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 177 (67.4 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 53/173 (30%), Positives = 84/173 (48%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ + + + + ++ I T E GI+ Y D HI V LY G++ S+
Sbjct: 973 NKESYLQIPS--AKVRPQTNITLQI-ATDEDSGILLYKGDKDHIA-VELY--RGRVRASY 1026
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE S L +DG + TLN P
Sbjct: 1027 DTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNFDSPL 1086
Query: 130 YLGGVP--LNTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQDKHT--SSGVIP 177
Y+GG+P N + +R G N T F GC+RNL N++L + +G++P
Sbjct: 1087 YVGGMPGRNNVAAALRQAPGHNGTSFHGCIRNLYINSELQDFRQVPMQTGILP 1139
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 55/173 (31%), Positives = 84/173 (48%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ + + + + ++ I T E GI+ Y D HI V LY G++ S+
Sbjct: 1158 NKESYLQIPS--AKVRPQTNITLQI-ATDEDSGILLYKGDKDHIA-VELY--RGRVRASY 1211
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE S L +DG + TLN P
Sbjct: 1212 DTGSHPASAIYSVETINDGNFHIVELLTLDSSLSLSVDGGSPKVITNLSKQSTLNFDSPL 1271
Query: 130 YLGGVP-LNTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQDKHT---SSGVIP 177
Y+GG+P N +R G N T F GC+RNL N++L QD +G++P
Sbjct: 1272 YVGGMPGKNNVASLRQAPGQNGTSFHGCIRNLYINSEL-QDFRKMPMQTGILP 1323
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 53/173 (30%), Positives = 84/173 (48%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ + + + + ++ I T E GI+ Y D HI V LY G++ S+
Sbjct: 1166 NKESYLQIPS--AKVRPQTNITLQI-ATDEDSGILLYKGDKDHIA-VELY--RGRVRASY 1219
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE S L +DG + TLN P
Sbjct: 1220 DTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNFDSPL 1279
Query: 130 YLGGVP--LNTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQDKHT--SSGVIP 177
Y+GG+P N + +R G N T F GC+RNL N++L + +G++P
Sbjct: 1280 YVGGMPGRNNVAAALRQAPGHNGTSFHGCIRNLYINSELQDFRQVPMQTGILP 1332
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 177 (67.4 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 53/173 (30%), Positives = 84/173 (48%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ + + + + ++ I T E GI+ Y D HI V LY G++ S+
Sbjct: 1168 NKESYLQIPS--AKVRPQTNITLQI-ATDEDSGILLYKGDKDHIA-VELY--RGRVRASY 1221
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+ GS P + + I DG +H VE S L +DG + TLN P
Sbjct: 1222 DTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNFDSPL 1281
Query: 130 YLGGVP--LNTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQDKHT--SSGVIP 177
Y+GG+P N + +R G N T F GC+RNL N++L + +G++P
Sbjct: 1282 YVGGMPGKNNVAAALRQAPGQNGTSFHGCIRNLYINSELQDFRKVPMQTGILP 1334
>UNIPROTKB|F1N119 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9913 "Bos taurus"
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007269 "neurotransmitter secretion" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
IPI:IPI00708029 EMBL:DAAA02030804 EMBL:DAAA02030805
EMBL:DAAA02030806 EMBL:DAAA02030807 Ensembl:ENSBTAT00000026956
Uniprot:F1N119
Length = 842
Score = 174 (66.3 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 68/282 (24%), Positives = 113/282 (40%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLS 101
GI+ D + L + G++ + N G GP L +G L D EWHTV R+ S
Sbjct: 483 GILMATTSRDSADTLRLELDAGRVKLTVNLGKGPETLFAGYNLN-DNEWHTVRVVRRGKS 541
Query: 102 GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKS 161
KL +D Q G+ G L F+ + T R + F+G L++L
Sbjct: 542 LKLTVDDQQAMTGQMAGDHTRLE----FH--NIETGIITERRYLSSVPSNFIGHLQSLTF 595
Query: 162 NNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRVGREMELKMDV 213
N D + + C G V F YV + + M L
Sbjct: 596 NGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYV-ALATLQAYTSMHLFFQF 654
Query: 214 KPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI 272
K ++ GL+L + D+ +++++ G + D G G + + P D QWH +
Sbjct: 655 KTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKP--LNDNQWHNV 712
Query: 273 VAIK-TKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
+ + T N+ +V +D+ T + G+ D + ++IGG
Sbjct: 713 MISRDTSNLHTVKIDTKITTQI---TAGARNLDLKSDLYIGG 751
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 229 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 287
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 288 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 346
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 347 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRET 406
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 632 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 687
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 688 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 745
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 746 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 800
Score = 84 (34.6 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 253 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 309
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+++ T PG SE D ++ +++GG P
Sbjct: 310 FQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 349
Score = 80 (33.2 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 30 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 86
Query: 87 DGEWHTVEFSR--QQLSG-------KLKIDGQVVAEG--ESKG-SSKTLNIFGP--FYLG 132
D WH V+ +R +Q SG KL + +G + G + + + G F+
Sbjct: 87 DNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYV 146
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167
G +T+ L G+ +++ F+GCL+ + N V+
Sbjct: 147 GGSPSTADLP-GS-PVSNNFMGCLKEVVYKNNDVR 179
>UNIPROTKB|F1LZ16 [details] [associations]
symbol:F1LZ16 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0051965 "positive regulation of synapse assembly" evidence=IEA]
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026
SMART:SM00181 InterPro:IPR000152 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
IPI:IPI01016279 Ensembl:ENSRNOT00000061624 ArrayExpress:F1LZ16
Uniprot:F1LZ16
Length = 842
Score = 174 (66.3 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 68/282 (24%), Positives = 113/282 (40%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLS 101
GI+ D + L + G++ + N G GP L +G L D EWHTV R+ S
Sbjct: 483 GILMATTSRDSADTLRLELDAGRVKLTVNLGKGPETLFAGYNLN-DNEWHTVRVVRRGKS 541
Query: 102 GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKS 161
KL +D Q G+ G L F+ + T R + F+G L++L
Sbjct: 542 LKLTVDDQQAMTGQMAGDHTRLE----FH--NIETGIITERRYLSSVPSNFIGHLQSLTF 595
Query: 162 NNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRVGREMELKMDV 213
N D + + C G V F YV + + M L
Sbjct: 596 NGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYV-ALATLQAYTSMHLFFQF 654
Query: 214 KPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI 272
K ++ GL+L + D+ +++++ G + D G G + + P D QWH +
Sbjct: 655 KTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKP--LNDNQWHNV 712
Query: 273 VAIK-TKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
+ + T N+ +V +D+ T + G+ D + ++IGG
Sbjct: 713 MISRDTSNLHTVKIDTKITTQI---TAGARNLDLKSDLYIGG 751
Score = 167 (63.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 229 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 287
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 288 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 346
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 347 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRET 406
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 632 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 687
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 688 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 745
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 746 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 800
Score = 84 (34.6 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 253 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 309
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+++ T PG SE D ++ +++GG P
Sbjct: 310 FQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 349
Score = 80 (33.2 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 30 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 86
Query: 87 DGEWHTVEFSR--QQLSG-------KLKIDGQVVAEG--ESKG-SSKTLNIFGP--FYLG 132
D WH V+ +R +Q SG KL + +G + G + + + G F+
Sbjct: 87 DNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYV 146
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167
G +T+ L G+ +++ F+GCL+ + N V+
Sbjct: 147 GGSPSTADLP-GS-PVSNNFMGCLKEVVYKNNDVR 179
>ZFIN|ZDB-GENE-070206-3 [details] [associations]
symbol:nrxn1b "neurexin 1b" species:7955 "Danio
rerio" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] [GO:0007416 "synapse assembly"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR027158 Pfam:PF00008 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-070206-3 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF309 EMBL:AL929536 EMBL:CU462915 IPI:IPI01023375
Ensembl:ENSDART00000149547 Bgee:F8W597 Uniprot:F8W597
Length = 1475
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 45/142 (31%), Positives = 72/142 (50%)
Query: 53 IDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVA 112
+D+ A+ + DG ++ + GSG + +K + DGEW+ V+F R SG + I+ V
Sbjct: 512 VDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINS-VRT 570
Query: 113 EGESKGSSKTLNIFGPFYLGGVPLNTSTLV--RGNLG--LNDTFVGCLRNLKSNNKLVQD 168
G S+ L++ P YLGGVP ++S V G LN +VGC+R+L + + V
Sbjct: 571 PYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDV 630
Query: 169 KHTS-----SGVIPCSDKTESG 185
+ + +GV P K G
Sbjct: 631 RRAAELQRAAGVKPSCGKEPPG 652
Score = 149 (57.5 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 65/258 (25%), Positives = 101/258 (39%)
Query: 70 NC--GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
NC GP +L +G L D EWHTV R+ S KL +D +GE G L
Sbjct: 762 NCTTSKGPESLFAGQNLN-DDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLE--- 817
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG-- 185
F+ + T R + F+G L++L N K D + + C G
Sbjct: 818 -FH--NIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFK 874
Query: 186 ------VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMID 238
V F + YV + + M L K + GL+L + D+ ++++
Sbjct: 875 SIIADPVTFKSCSSYVT-LPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVK 933
Query: 239 GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVI-SVAVDSMTTDKPGLGP 297
G + D G G P D WH ++ + N + +V +D+ TT + LG
Sbjct: 934 GYLHYISDLGNGAHLIKGNSIKP--LNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLG- 990
Query: 298 PGSSETDTNNAVFIGGHP 315
+ D +F+GG P
Sbjct: 991 --AKNLDLKGDLFVGGVP 1006
Score = 140 (54.3 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 40/141 (28%), Positives = 69/141 (48%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN--CGSGPMALSSGDKLIL 86
+ S +KTT +G++ Y D D++ L+V G++ F+ C LS D I
Sbjct: 53 EMSFSVKTT-HLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLS--DVAIN 109
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRG 144
D WH+V R + L +D +V E E K + + +F +LGG+P L + +L
Sbjct: 110 DNRWHSVSIMRNFRNTTLIVDDEVKWE-EVKSQRRDMTVFSHLFLGGIPSELRSVSLQLT 168
Query: 145 NLGLND--TFVGCLRNLKSNN 163
+ + D +F G + ++K N+
Sbjct: 169 SKTVKDHTSFTGWIMDVKVND 189
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 49/178 (27%), Positives = 85/178 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S SS + P++ + F KTTS DG+I Y + + D++A+ + G +HY
Sbjct: 885 SCSSYVTLPSLQAYYYMYLFFQF--KTTSA-DGLILYNSGDGN-DFIAVELVKGYLHYIS 940
Query: 70 NCGSGPMALSSGD-KLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + K + D WH V SR + ++ID + ++ + G+ K L++ G
Sbjct: 941 DLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQ-TTLGA-KNLDLKG 998
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
++GGVP + + + F GCL ++ N +L D T + V C + E G
Sbjct: 999 DLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRL-PDLMTEALV--CVGQIERG 1053
Score = 111 (44.1 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 40/137 (29%), Positives = 64/137 (46%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLILDGEWHTVE 94
T +++G++ + + DYV L +K+G + N GSG AL + D EWH V+
Sbjct: 287 TLQRNGLMLHTGKIA--DYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVK 344
Query: 95 FSR--QQLSG------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
R +Q SG + +DG + G ++ L Y+GG P +T+ L +
Sbjct: 345 VLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSP-STADLPESPV 403
Query: 147 GLNDTFVGCLRNLKSNN 163
N F+GCLR + N
Sbjct: 404 SNN--FMGCLREVVYKN 418
Score = 86 (35.3 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 22/88 (25%), Positives = 44/88 (50%)
Query: 228 KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS 287
K D+F ++M+DG + +D G G + DG+W+ + + +++++S
Sbjct: 511 KVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVN---DGEWYHVDFQRDGKSGTISINS 567
Query: 288 MTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+ T P L P S D ++ +++GG P
Sbjct: 568 VRT--PYLCPGDSELLDLDDPLYLGGVP 593
Score = 86 (35.3 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 24/116 (20%), Positives = 53/116 (45%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + + +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 280 EITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 338
Query: 268 QWHTIVAIKTKN--------VISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+WH + ++ +++++VD + T G + +++ +++GG P
Sbjct: 339 EWHDVKVLRNLRQHSGVGYAMVTISVDGILTTT-GYTQEEYTMLGSDDFLYVGGSP 393
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 176 (67.0 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 58/175 (33%), Positives = 88/175 (50%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+K S ++ P+ + + + + ++ I T E GI+ Y D HI V LY G++ S+
Sbjct: 1166 NKESYLQIPS--AKVRPQTNITLQI-ATDEDSGILLYKGDKDHIA-VELY--RGRVRASY 1219
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDG--QVVAEGESKGSSKTLNIFG 127
+ GS P + + I DG +H VE S L +DG + SK S TLN
Sbjct: 1220 DTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGNPKIITNLSKQS--TLNFDS 1277
Query: 128 PFYLGGVP--LNTSTLVRGNLGLNDT-FVGCLRNLKSNNKL--VQDKHTSSGVIP 177
P Y+GG+P N ++L R G N T F GC+RNL N++L Q +G++P
Sbjct: 1278 PLYVGGMPGKSNVASL-RQAPGQNGTSFHGCIRNLYINSELQDFQKVPMQTGILP 1331
>UNIPROTKB|F1NWQ6 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IEA] [GO:0043236 "laminin binding" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043113 "receptor
clustering" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR000152 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0045944 GO:GO:0007009 GO:GO:0045202
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605
GO:GO:0043113 GO:GO:0007213 PROSITE:PS01186 GO:GO:0030548
GO:GO:2000541 GO:GO:0032314 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0001934 InterPro:IPR011497
GeneTree:ENSGT00530000063501 EMBL:AADN02040845 EMBL:AADN02040846
EMBL:AADN02040847 EMBL:AADN02040848 EMBL:AADN02040849
EMBL:AADN02040850 EMBL:AADN02077829 IPI:IPI01017232
Ensembl:ENSGALT00000040179 Uniprot:F1NWQ6
Length = 1998
Score = 170 (64.9 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 31 SIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEW 90
+++ + T E G++ Y + D+++L + G + FN GSG ++S + + G+W
Sbjct: 1343 AMEFRAT-ELSGLLLYNGQNRGKDFISLALVGGFVELRFNTGSGTGVITSKVR-VEPGKW 1400
Query: 91 HTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLND 150
H + +R + SG L +DG+ GES + LN+ ++GG P + +V
Sbjct: 1401 HQLVVNRNRRSGMLAVDGEPHVSGESPTGTDGLNLDTDLFVGGAPEDQMAVVAERTAATV 1460
Query: 151 TFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
GC+R L NN++ + S V+ S E G
Sbjct: 1461 GLKGCIRLLDVNNQMYDLREKGSDVLYGSGVGECG 1495
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
F + IKT + Q I++ ++ DY+AL + DG + ++ GS P+ L S I
Sbjct: 1841 FELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMMYDLGSKPVVLRSTVP-INTNH 1899
Query: 90 WHTVEFSR----QQLS-GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
W ++ R Q+ G L DGQ V G+ +G +L G +LGG+ S +
Sbjct: 1900 WTHIKAYRWEGGQEWGWGGLLWDGQAVTRGQEQGPQGSLPSLGALWLGGME-RLSVAHKL 1958
Query: 145 NLGLNDTFVGCLRNL---KSNNKLVQDKHTSSGVIPCSDK 181
+ F+GC+R++ + LV+D + ++ CS K
Sbjct: 1959 PKAYSTGFIGCIRDVIVDRQELHLVEDALNNPTILHCSAK 1998
Score = 142 (55.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 41/138 (29%), Positives = 67/138 (48%)
Query: 42 GIIFY---VADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQ 98
G+IFY D K D+V+L + DG + Y ++ G G LS + + W +V R
Sbjct: 1621 GMIFYNGQKTDGKG-DFVSLALHDGYLEYRYDLGKGAAVLSRSKEPVPLNTWISVLLERS 1679
Query: 99 QLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRN 158
G ++I+ GES LN+ PFY+GG P + S L R ++ +F G ++
Sbjct: 1680 GRKGVMRINNGERVMGESPVPHAFLNLKEPFYVGGAP-DFSKLARA-AAISTSFYGAVQR 1737
Query: 159 LKSNN-KLVQDKHTSSGV 175
+ L++++H S V
Sbjct: 1738 ISIKGVPLLKEQHIRSAV 1755
Score = 54 (24.1 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 210 KMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGKGPI 252
++ +K GL+L + DY L ++DG V+ D G P+
Sbjct: 1842 ELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMMYDLGSKPV 1887
Score = 46 (21.3 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 189 YNSGGYVK--GVEQFRVGREMELKMDVK--PRNISGLLL----SVHSKKDYFILQMIDGS 240
+N Y++ G++ F + ++ M+V ++ SG++ K D+ L + DG
Sbjct: 1586 FNGFSYLELNGLQTFVPDLQDKMSMEVVFLAKSPSGMIFYNGQKTDGKGDFVSLALHDGY 1645
Query: 241 VKATVDNGKG 250
++ D GKG
Sbjct: 1646 LEYRYDLGKG 1655
>FB|FBgn0032683 [details] [associations]
symbol:kon "kon-tiki" species:7227 "Drosophila melanogaster"
[GO:0051491 "positive regulation of filopodium assembly"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0051286 "cell tip" evidence=IDA] [GO:0016203 "muscle
attachment" evidence=IGI;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0022008 "neurogenesis" evidence=IMP]
EMBL:AE014134 GO:GO:0022008 GO:GO:0051286 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0016203
GO:GO:0051491 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00550000074429 UCSC:CG10275-RB
FlyBase:FBgn0032683 RefSeq:NP_609881.3 UniGene:Dm.454
ProteinModelPortal:Q9VJ82 STRING:Q9VJ82 EnsemblMetazoa:FBtr0300341
EnsemblMetazoa:FBtr0332322 EnsemblMetazoa:FBtr0332323 GeneID:35104
KEGG:dme:Dmel_CG10275 CTD:35104 InParanoid:Q9VJ82 OMA:SGGFNFQ
GenomeRNAi:35104 NextBio:791884 Bgee:Q9VJ82 Uniprot:Q9VJ82
Length = 2381
Score = 183 (69.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 77/303 (25%), Positives = 133/303 (43%)
Query: 27 KFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLIL 86
K +I +K + Q+ ++A DY L ++ G I +S+ + L S K L
Sbjct: 46 KMSTNIRVKFRTRQENAFLFLA-AGRTDYCLLRLESGLISFSYKIERDVVQLRSPKKQKL 104
Query: 87 -DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNI-FGPFYLGGVPLNTSTLVRG 144
D EWH V R + + L++DG ++ + + G LNI FG F LGGV T+ +
Sbjct: 105 NDLEWHDVAVQRFENNITLQVDGYIMRK-QLPGDLAALNIHFGTF-LGGVGDFTAEFLDD 162
Query: 145 NLGLNDTFVGCLRNLKSNN----KLVQDK--HTSS-GVI-PCSDKTESGV-----FFYNS 191
+G F GC+ ++ NN K +D+ HT+S GV CS + E + F N
Sbjct: 163 VIG----FRGCISDVFYNNINIIKRAKDRTSHTTSTGVAWTCSTEFEGSIQDSISFMRND 218
Query: 192 GGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGP 251
+ E + +G + L+ + +G++ + D+ +L++ D +K T N G
Sbjct: 219 SYSLMMKESYAMGETLSLQF--RTMASAGVIF-FNGGYDFILLEIEDQHLKVTF-NKAGS 274
Query: 252 ISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGL-GPPGSSETDTNNAVF 310
+ T DG+WH + + +++D T+ G + + +VF
Sbjct: 275 LVQFMTNEH---ISDGKWHRVFLRYNAAIAELSLDDATSGYRGTHANETKASINLEKSVF 331
Query: 311 IGG 313
GG
Sbjct: 332 FGG 334
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 302 ETDTNNAVFIGGHPFLSLSSKKSGPRTK 329
+T N F+ H + ++KS P K
Sbjct: 1517 DTPPENLTFVVNHIYGGYLARKSAPHQK 1544
>ZFIN|ZDB-GENE-030131-7773 [details] [associations]
symbol:gas6 "growth arrest-specific 6"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR000294 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00594 Pfam:PF07645 PRINTS:PR00001
PROSITE:PS00011 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50998
SMART:SM00069 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030131-7773 GO:GO:0005576 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR026823 Pfam:PF12662 Pfam:PF02210
Gene3D:4.10.740.10 InterPro:IPR017857 SUPFAM:SSF57630 CTD:2621
eggNOG:NOG149502 HOGENOM:HOG000065758 HOVERGEN:HBG051702 KO:K05464
OrthoDB:EOG4Z0B57 EMBL:BC053117 IPI:IPI00485599 RefSeq:NP_956272.1
UniGene:Dr.80253 HSSP:Q14393 ProteinModelPortal:Q7T3H4 SMR:Q7T3H4
GeneID:335830 KEGG:dre:335830 InParanoid:Q7T3H4 NextBio:20811057
ArrayExpress:Q7T3H4 Uniprot:Q7T3H4
Length = 648
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 73/318 (22%), Positives = 132/318 (41%)
Query: 18 PTITGRFKNK----FDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
P + RF+ + F D++T + +G+IF+ + ++ L V G++ G
Sbjct: 294 PVVRLRFRRRVQTGFTAEFDLRTF-DPEGVIFFAGGHLNSSWIVLLVHHGKLELQLKYGV 352
Query: 74 GPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNI-FGPFYL- 131
SSG + + DG+WH + Q S +KID + V + G TLN L
Sbjct: 353 VSRVTSSGPQ-VNDGQWHKISVEEQGRSLVIKIDREAVMKIAVNGDLFTLNKNMHELNLT 411
Query: 132 -GGVPLNTSTLVRGNLGLNDTFVGCLRN---LKSNNKLVQDKHTSSGVIPCSDKTESGVF 187
GGVP LV +N GC+++ L + +Q+ + + C E
Sbjct: 412 VGGVPFRDDGLVSR---VNPRLDGCMKDWRWLTGEDTSIQETIRHNERMQCY-AVEDHSA 467
Query: 188 FYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLS-VHSKKDYFILQMID---GSVKA 243
FY G+ + + + + ++ + G+L + V + F + + D G+++
Sbjct: 468 FYPGHGFAYFNHSHGDNQTLSVHVTLRAASSMGVLFALVRQDRVPFSISLSDYHPGTLQW 527
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
T + + + S P DGQ HT+ + N + VD+ + S +
Sbjct: 528 T-KHVLVSLGDVVVGSVPVNLSDGQTHTVNVTMSGNDSVLEVDAQLAQMEMMEGVDSLDL 586
Query: 304 DTNNAVFIGGHPFLSLSS 321
++ + FIGG P +SL S
Sbjct: 587 TSSYSTFIGGIPDVSLVS 604
>UNIPROTKB|I3LR37 [details] [associations]
symbol:LOC100620189 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR000742
InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF405
EMBL:FP085423 Ensembl:ENSSSCT00000025256 OMA:TIAIRIY Uniprot:I3LR37
Length = 294
Score = 162 (62.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/172 (28%), Positives = 82/172 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS I+F D D++A+ + G IHY F
Sbjct: 77 TKSSYLSLATLQAYTSMHLFFQF--KTTSADGFILFNSGDGN--DFIAVELVKGYIHYVF 132
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSG-KLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + D+ + D +WH V +R + LK+D +VV + + +K L++ G
Sbjct: 133 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVIN--GAKNLDLKG 190
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL---VQDKHTSSGVI 176
Y+ G+ + + + D F GCL ++ N +L + D SG I
Sbjct: 191 DLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQI 242
>UNIPROTKB|F1NLI2 [details] [associations]
symbol:F1NLI2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] InterPro:IPR000742
InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:AADN02003517 EMBL:AADN02003518
EMBL:AADN02003519 EMBL:AADN02003520 EMBL:AADN02003521
EMBL:AADN02003522 EMBL:AADN02003523 EMBL:AADN02003524
EMBL:AADN02003525 EMBL:AADN02003526 EMBL:AADN02003527
EMBL:AADN02003528 EMBL:AADN02003529 EMBL:AADN02003530
EMBL:AADN02003531 EMBL:AADN02003532 EMBL:AADN02003533
EMBL:AADN02003534 EMBL:AADN02003535 EMBL:AADN02003536
EMBL:AADN02003537 EMBL:AADN02003538 EMBL:AADN02003539
IPI:IPI00681032 Ensembl:ENSGALT00000017123 ArrayExpress:F1NLI2
Uniprot:F1NLI2
Length = 861
Score = 164 (62.8 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 82/314 (26%), Positives = 124/314 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 460 EAEDVSFRFMSQRAYGLLMATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNA 513
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D V AEG G L F+
Sbjct: 514 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLMVDDDV-AEGTMVGDHTRLE----FH- 566
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 567 -NIETGIMTEKRYISVIPSSFIGHLQSLMFNGMLYIDLCKNGDIDYCELKARFGLRNIIA 625
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F Y+ + + M L K + G +L + D+ ++++ G +
Sbjct: 626 DPVTFKTKSSYLS-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGNDFIAVELVKGYIH 684
Query: 243 ATVDNGKGPISAIYTPSD-PYFFCDGQWHTIVAIK-TKNVISVAVDS-MTTDKPGLGPPG 299
D G GP + I SD P D QWH +V + N S+ VD+ M T G
Sbjct: 685 YVFDLGNGP-NVIKGNSDRP--LNDNQWHNVVITRDNSNTHSLKVDTKMVTQVIN----G 737
Query: 300 SSETDTNNAVFIGG 313
+ D ++I G
Sbjct: 738 AKNLDLKGDLYIAG 751
Score = 159 (61.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS I+F D D++A+ + G IHY F
Sbjct: 632 TKSSYLSLATLQAYTSMHLFFQF--KTTSADGFILFNSGDGN--DFIAVELVKGYIHYVF 687
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSG-KLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + D+ + D +WH V +R + LK+D ++V + + +K L++ G
Sbjct: 688 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKMVTQVIN--GAKNLDLKG 745
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL---VQDKHTSSGVI 176
Y+ G+ + + + D F GCL ++ N +L + D SG I
Sbjct: 746 DLYIAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQI 797
Score = 154 (59.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 50/177 (28%), Positives = 86/177 (48%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D + +D+ A+ + DG ++ + G
Sbjct: 221 KRMGSISFDFRTT-EPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMG 279
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLG
Sbjct: 280 SGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GESEILDLEGDMYLG 338
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGV-IPCS 179
G+P N + L+ LN +VGC+R+L +S N + + + ++GV CS
Sbjct: 339 GLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEAQNAAGVKSSCS 395
Score = 133 (51.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLIL 86
+ ++ KT +++G+I + K DYV L +KDG + N GSG + +
Sbjct: 37 EITLSFKTW-QRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN 93
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
D WH V+ +R + +DG + G ++ L FY+GG P +T+ L G+
Sbjct: 94 DNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-STADLP-GS- 150
Query: 147 GLNDTFVGCLRNL--KSNN------KLVQDKHTSSGV-----IPCSD-KTESGVFFYNSG 192
+++ F+GCL+ + K+N+ +L + T + C + T + F
Sbjct: 151 PVSNNFMGCLKEVVYKNNDIRLELSRLARIGDTKMKIYGEVKFVCENVATLDPISFETPE 210
Query: 193 GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
Y+ + ++ R + D + +GL+L H K
Sbjct: 211 AYIS-LPKWNTKRMGSISFDFRTTEPNGLILFTHGK 245
Score = 84 (34.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KP+ ++K D+F ++++DG++ +D G G I T DG+W+ +
Sbjct: 245 KPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKAN---DGEWYHVD 301
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+S T P G SE D +++GG P
Sbjct: 302 IQRDGRSGTISVNSRRT--P-FTASGESEILDLEGDMYLGGLP 341
Score = 60 (26.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 42/185 (22%), Positives = 75/185 (40%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNIS--- 219
N+ + D T +G + + E+ + Y+ Y+K + + E E DV R +S
Sbjct: 418 NRFICDC-TGTGYWGRTCEREASILSYDGSMYMKIIMPMVMHTEAE---DVSFRFMSQRA 473
Query: 220 -GLLLSVHSKK--DYFILQMIDGSVKATV--DNGKGPISAIYTPSDPYF---FCDGQWHT 271
GLL++ S+ D L++ G VK V D + +A P Y D +WHT
Sbjct: 474 YGLLMATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNASKGPETLYAGQKLNDNEWHT 533
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRR 331
+ ++ + + VD D +G H L + ++G T++R
Sbjct: 534 VRVVRRGKSLKLMVDD----------------DVAEGTMVGDHTRLEFHNIETGIMTEKR 577
Query: 332 SVFLI 336
+ +I
Sbjct: 578 YISVI 582
>UNIPROTKB|F8WB18 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0051965 "positive regulation
of synapse assembly" evidence=IEA] [GO:0090129 "positive regulation
of synapse maturation" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027158
PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
PANTHER:PTHR10127:SF309 EMBL:AC007462 EMBL:AC007682 EMBL:AC009234
EMBL:AC068725 EMBL:AC069550 EMBL:AC078994 EMBL:AC068715
IPI:IPI00442299 HGNC:HGNC:8008 ChiTaRS:NRXN1 EMBL:AC007560
ProteinModelPortal:F8WB18 SMR:F8WB18 Ensembl:ENST00000406859
ArrayExpress:F8WB18 Bgee:F8WB18 Uniprot:F8WB18
Length = 1477
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 499 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 557
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 558 SGTIKIKALLKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 616
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 617 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSKET 676
Score = 160 (61.4 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 738 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 791
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 792 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 845
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 846 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 904
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 905 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 963
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 964 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 1018
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 1019 NLDLKSDLYIGG 1030
Score = 148 (57.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 911 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 966
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 967 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1024
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 1025 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 1079
Score = 137 (53.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDGQIHYSFNCGSGPMALSSGDKLILD 87
+ S +KT S + G++ Y D D++ L + + G++ SF+ A D + D
Sbjct: 53 EMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVND 111
Query: 88 GEWHTVEFSRQQLSGKLKIDGQVVAEG-ESKGSSKTLNIFGPFYLGGVP--LNTSTL--V 142
G WH+V RQ + L ID QV A+ E K + + +F ++GG+P L + L
Sbjct: 112 GAWHSVRIRRQFRNTTLFID-QVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLT 170
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGG 193
++ + F G +R+++ N+ V SG + D+ NSGG
Sbjct: 171 LASVREREPFKGWIRDVRVNSSQVLP--VDSGEVKLDDEPP------NSGG 213
Score = 115 (45.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 42/149 (28%), Positives = 74/149 (49%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 307 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 363
Query: 87 DGEWHTVEFSR--QQLSG------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT 138
D WH V+ +R +Q SG + +DG + G ++ L FY+GG P +T
Sbjct: 364 DNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-ST 422
Query: 139 STLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167
+ L G+ +++ F+GCL+ + N V+
Sbjct: 423 ADLP-GS-PVSNNFMGCLKEVVYKNNDVR 449
Score = 85 (35.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 25/116 (21%), Positives = 50/116 (43%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 307 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 365
Query: 268 QWHTIVAIKTKN--------VISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
WH + + +++++VD + T G + +++ ++GG P
Sbjct: 366 AWHDVKVTRNLRQHSGIGHAMVTISVDGILTTT-GYTQEDYTMLGSDDFFYVGGSP 420
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 27/105 (25%), Positives = 51/105 (48%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPIS--AIYTPSDPYFFCDGQWHT 271
KPR+ K D+F ++M+DG + +D G G I A+ + DG+W+
Sbjct: 523 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALLKKVN-----DGEWYH 577
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ + +++V+++ T PG SE D ++ +++GG P
Sbjct: 578 VDFQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 619
Score = 39 (18.8 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 270 HTIVAIKTKNVISVAVDSMTTDKP 293
H +VA K +NV ++ D +T + P
Sbjct: 466 HGVVAFKCENVATL--DPITFETP 487
>UNIPROTKB|Q9ULB1 [details] [associations]
symbol:NRXN1 "Neurexin-1" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0033130 "acetylcholine receptor binding"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0051965 "positive regulation of synapse assembly" evidence=IEA]
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:2000821 "regulation of grooming behavior"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0005887 "integral
to plasma membrane" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0009986 "cell surface" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IC] [GO:0051968 "positive regulation of
synaptic transmission, glutamatergic" evidence=ISS] [GO:0007612
"learning" evidence=ISS] [GO:0050885 "neuromuscular process
controlling balance" evidence=ISS] [GO:2000463 "positive regulation
of excitatory postsynaptic membrane potential" evidence=ISS]
[GO:0060134 "prepulse inhibition" evidence=ISS] [GO:0035176 "social
behavior" evidence=IMP] [GO:0071625 "vocalization behavior"
evidence=IMP] [GO:0097118 "neuroligin clustering" evidence=ISS]
[GO:0097119 "postsynaptic density protein 95 clustering"
evidence=ISS] [GO:0097109 "neuroligin family protein binding"
evidence=ISS] [GO:0097104 "postsynaptic membrane assembly"
evidence=ISS] [GO:0097116 "gephyrin clustering" evidence=ISS]
[GO:0050839 "cell adhesion molecule binding" evidence=ISS]
[GO:0030534 "adult behavior" evidence=ISS] InterPro:IPR000742
InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
GO:GO:0007411 GO:GO:0009986 GO:GO:0005887 GO:GO:0046872
GO:GO:0030054 GO:GO:0007612 GO:GO:0050885 GO:GO:0007155
GO:GO:0045202 GO:GO:0051968 GO:GO:0060134 GO:GO:0004872
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0035176 PROSITE:PS01186
GO:GO:0030534 GO:GO:0050839 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Orphanet:106 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 Orphanet:221150 GO:GO:0071625
Orphanet:3140 GO:GO:2000463 GO:GO:0097119 GO:GO:0097104
GO:GO:0097116 eggNOG:NOG302266 HOVERGEN:HBG052670 KO:K07377
OrthoDB:EOG41G339 PANTHER:PTHR10127:SF309 CTD:9378 EMBL:EF539882
EMBL:AB035356 EMBL:AB011150 EMBL:AC007462 EMBL:AC007682
EMBL:AC009234 EMBL:AC068725 EMBL:AC069550 EMBL:AC078994
EMBL:AC068715 IPI:IPI00442299 IPI:IPI00855821 IPI:IPI01010752
RefSeq:NP_001129131.1 RefSeq:NP_004792.1 RefSeq:NP_620072.1
UniGene:Hs.637685 ProteinModelPortal:Q9ULB1 SMR:Q9ULB1
IntAct:Q9ULB1 STRING:Q9ULB1 PhosphoSite:Q9ULB1 DMDM:17369704
PaxDb:Q9ULB1 PRIDE:Q9ULB1 Ensembl:ENST00000404971
Ensembl:ENST00000405472 Ensembl:ENST00000406316 GeneID:9378
KEGG:hsa:9378 UCSC:uc021vhg.1 UCSC:uc021vhh.1 GeneCards:GC02M050145
HGNC:HGNC:8008 MIM:600565 neXtProt:NX_Q9ULB1 PharmGKB:PA31786
ChiTaRS:NRXN1 GenomeRNAi:9378 NextBio:35134 ArrayExpress:Q9ULB1
Bgee:Q9ULB1 CleanEx:HS_NRXN1 Genevestigator:Q9ULB1 GO:GO:0097109
GO:GO:0097118 Uniprot:Q9ULB1
Length = 1477
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 499 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 557
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 558 SGTIKIKALLKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 616
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 617 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSKET 676
Score = 160 (61.4 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 738 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 791
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 792 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 845
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 846 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 904
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 905 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 963
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 964 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 1018
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 1019 NLDLKSDLYIGG 1030
Score = 148 (57.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 911 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 966
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 967 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1024
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 1025 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 1079
Score = 137 (53.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDGQIHYSFNCGSGPMALSSGDKLILD 87
+ S +KT S + G++ Y D D++ L + + G++ SF+ A D + D
Sbjct: 53 EMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVND 111
Query: 88 GEWHTVEFSRQQLSGKLKIDGQVVAEG-ESKGSSKTLNIFGPFYLGGVP--LNTSTL--V 142
G WH+V RQ + L ID QV A+ E K + + +F ++GG+P L + L
Sbjct: 112 GAWHSVRIRRQFRNTTLFID-QVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLT 170
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGG 193
++ + F G +R+++ N+ V SG + D+ NSGG
Sbjct: 171 LASVREREPFKGWIRDVRVNSSQVLP--VDSGEVKLDDEPP------NSGG 213
Score = 115 (45.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 42/149 (28%), Positives = 74/149 (49%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 307 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 363
Query: 87 DGEWHTVEFSR--QQLSG------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT 138
D WH V+ +R +Q SG + +DG + G ++ L FY+GG P +T
Sbjct: 364 DNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-ST 422
Query: 139 STLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167
+ L G+ +++ F+GCL+ + N V+
Sbjct: 423 ADLP-GS-PVSNNFMGCLKEVVYKNNDVR 449
Score = 85 (35.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 25/116 (21%), Positives = 50/116 (43%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 307 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 365
Query: 268 QWHTIVAIKTKN--------VISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
WH + + +++++VD + T G + +++ ++GG P
Sbjct: 366 AWHDVKVTRNLRQHSGIGHAMVTISVDGILTTT-GYTQEDYTMLGSDDFFYVGGSP 420
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 27/105 (25%), Positives = 51/105 (48%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPIS--AIYTPSDPYFFCDGQWHT 271
KPR+ K D+F ++M+DG + +D G G I A+ + DG+W+
Sbjct: 523 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALLKKVN-----DGEWYH 577
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ + +++V+++ T PG SE D ++ +++GG P
Sbjct: 578 VDFQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 619
Score = 39 (18.8 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 270 HTIVAIKTKNVISVAVDSMTTDKP 293
H +VA K +NV ++ D +T + P
Sbjct: 466 HGVVAFKCENVATL--DPITFETP 487
>UNIPROTKB|J9NSB0 [details] [associations]
symbol:NRXN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] InterPro:IPR000742
InterPro:IPR027160 PROSITE:PS50026 SMART:SM00181 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF307
EMBL:AAEX03011644 Ensembl:ENSCAFT00000047054 Uniprot:J9NSB0
Length = 1508
Score = 170 (64.9 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 47/158 (29%), Positives = 81/158 (51%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S+SS + T+ F KTT+ DG++ + + + D++ + + G IHY F
Sbjct: 914 SRSSYLALATLQAYASMHLFFQF--KTTAP-DGLLLFNSGNGN-DFIVIELVKGYIHYVF 969
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + DK + D +WH V SR + LKID + V + S G+ + L++ G
Sbjct: 970 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQ-HSNGA-RNLDLKG 1027
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GG+ N + + + D F GCL ++ N +L
Sbjct: 1028 ELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRL 1065
Score = 160 (61.4 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 73/291 (25%), Positives = 116/291 (39%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFN--C-------GSGPMALSSGDKLILDGEWHT 92
G++ + D + L + GQ+ + N C GP L +G KL D EWHT
Sbjct: 757 GLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLN-DNEWHT 815
Query: 93 VEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
V R+ S +L +D V EG+ G+ L F+ + T R + F
Sbjct: 816 VRVVRRGKSLQLSVDN-VTVEGQMAGAHTRLE----FH--NIETGIMTERRFISVVPSNF 868
Query: 153 VGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRVG 204
+G L L N + D+ + C G V F + Y+ + +
Sbjct: 869 IGHLSGLVFNGQPYMDQCKDGDITYCELNARFGLRAIVADPVTFKSRSSYL-ALATLQAY 927
Query: 205 REMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYF 263
M L K GLLL + + D+ +++++ G + D G GP S + SD
Sbjct: 928 ASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKGYIHYVFDLGNGP-SLMKGNSDKPV 986
Query: 264 FCDGQWHTIVAIKTK-NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
D QWH +V + NV ++ +DS T + G+ D ++IGG
Sbjct: 987 N-DNQWHNVVVSRDPGNVHTLKIDSRTVTQHS---NGARNLDLKGELYIGG 1033
Score = 127 (49.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLILDGEWHTVE 94
T +++G++ + K DYV L +K G + N GSG AL + D WH V
Sbjct: 325 TLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVR 382
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVG 154
+R + +DG + G ++ L FY+GG P NT+ L G+ +++ F+G
Sbjct: 383 VTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSP-NTADLP-GS-PVSNNFMG 439
Query: 155 CLRNL--KSNN-KLVQDKHTSSG 174
CL+++ K+N+ KL + G
Sbjct: 440 CLKDVVYKNNDFKLELSRLAKEG 462
Score = 126 (49.4 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 44/181 (24%), Positives = 83/181 (45%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV------------ADVKHIDYVALYVKDGQIHYSFNCG 72
K S+D +TT E +G++ + + + DY A+ + DG ++ + G
Sbjct: 502 KRTGSISLDFRTT-EPNGLLLFSQGRRAGAGAGSHSSAQRADYFAMELLDGYLYLLLDMG 560
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + L + + + DGEW V+F R G + ++ + + G S+ L++ YLG
Sbjct: 561 SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNSRSTPF-LATGESEILDLESELYLG 619
Query: 133 GVPLNTSTLVR-----GNLGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDK 181
G+P + L +VGC+R+L +S + + + + + G+ P CS +
Sbjct: 620 GLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGITPFCSRE 679
Query: 182 T 182
T
Sbjct: 680 T 680
Score = 125 (49.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 32/134 (23%), Positives = 57/134 (42%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++T + + ++ Y+ D D++ L + DG++ F A D D
Sbjct: 57 ELSFSLRTNATR-ALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPAADD 115
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V +R L +DG+V E + + + + ++GG+P + S L +
Sbjct: 116 RWHMVLLTRDARRTALAVDGEV-RSAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 174
Query: 147 GLNDTFVGCLRNLK 160
F G L NLK
Sbjct: 175 KYEPPFRGLLANLK 188
Score = 98 (39.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 28/110 (25%), Positives = 48/110 (43%)
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E+ L RN GL+L DY L + G+V ++ G G A+ P + F
Sbjct: 318 EITLAFRTLQRN--GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFN- 374
Query: 266 DGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
D WH + + ++++VD + T G + +++ +IGG P
Sbjct: 375 DNAWHDVRVTRNLRQVTISVDGILTTT-GYTQEDYTMLGSDDFFYIGGSP 423
Score = 78 (32.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/88 (27%), Positives = 43/88 (48%)
Query: 228 KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS 287
+ DYF ++++DG + +D G G I + S DG+W + + S++V+S
Sbjct: 540 RADYFAMELLDGYLYLLLDMGSGGIK-LRASSRKVN--DGEWCHVDFQRDGRKGSISVNS 596
Query: 288 MTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+T P L S D + +++GG P
Sbjct: 597 RST--PFLATGESEILDLESELYLGGLP 622
Score = 73 (30.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 30/137 (21%), Positives = 62/137 (45%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREME-LKMDVKPRNISGL 221
N+ V D +G + + E+ V Y+ Y+K + + E E + + + GL
Sbjct: 700 NRFVCDC-VGTGFLGRVCEREATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGL 758
Query: 222 LLSVHSKK--DYFILQMIDGSVKATVDN-----GKGPISAIYTPSDPYFFCDGQWHTIVA 274
+++ S++ D L++ G +K TV+ G P T + D +WHT+
Sbjct: 759 MMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLNDNEWHTVRV 818
Query: 275 IKTKNVISVAVDSMTTD 291
++ + ++VD++T +
Sbjct: 819 VRRGKSLQLSVDNVTVE 835
>UNIPROTKB|E7ERL8 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0051965 "positive regulation
of synapse assembly" evidence=IEA] [GO:0090129 "positive regulation
of synapse maturation" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027158
PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
PANTHER:PTHR10127:SF309 EMBL:AC007462 EMBL:AC007682 EMBL:AC009234
EMBL:AC068725 EMBL:AC069550 EMBL:AC078994 EMBL:AC068715
HGNC:HGNC:8008 ChiTaRS:NRXN1 EMBL:AC007560 IPI:IPI00893903
ProteinModelPortal:E7ERL8 SMR:E7ERL8 Ensembl:ENST00000401669
ArrayExpress:E7ERL8 Bgee:E7ERL8 Uniprot:E7ERL8
Length = 1507
Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 499 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 557
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 558 SGTIKIKALLKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 616
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 617 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSKET 676
Score = 160 (61.4 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 738 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 791
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 792 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 845
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 846 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 904
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 905 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 963
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 964 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 1018
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 1019 NLDLKSDLYIGG 1030
Score = 148 (57.2 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 911 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 966
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 967 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1024
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 1025 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 1079
Score = 137 (53.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDGQIHYSFNCGSGPMALSSGDKLILD 87
+ S +KT S + G++ Y D D++ L + + G++ SF+ A D + D
Sbjct: 53 EMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVND 111
Query: 88 GEWHTVEFSRQQLSGKLKIDGQVVAEG-ESKGSSKTLNIFGPFYLGGVP--LNTSTL--V 142
G WH+V RQ + L ID QV A+ E K + + +F ++GG+P L + L
Sbjct: 112 GAWHSVRIRRQFRNTTLFID-QVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLT 170
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGG 193
++ + F G +R+++ N+ V SG + D+ NSGG
Sbjct: 171 LASVREREPFKGWIRDVRVNSSQVLP--VDSGEVKLDDEPP------NSGG 213
Score = 115 (45.5 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 42/149 (28%), Positives = 74/149 (49%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 307 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 363
Query: 87 DGEWHTVEFSR--QQLSG------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT 138
D WH V+ +R +Q SG + +DG + G ++ L FY+GG P +T
Sbjct: 364 DNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-ST 422
Query: 139 STLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167
+ L G+ +++ F+GCL+ + N V+
Sbjct: 423 ADLP-GS-PVSNNFMGCLKEVVYKNNDVR 449
Score = 85 (35.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 25/116 (21%), Positives = 50/116 (43%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 307 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 365
Query: 268 QWHTIVAIKTKN--------VISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
WH + + +++++VD + T G + +++ ++GG P
Sbjct: 366 AWHDVKVTRNLRQHSGIGHAMVTISVDGILTTT-GYTQEDYTMLGSDDFFYVGGSP 420
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 27/105 (25%), Positives = 51/105 (48%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPIS--AIYTPSDPYFFCDGQWHT 271
KPR+ K D+F ++M+DG + +D G G I A+ + DG+W+
Sbjct: 523 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALLKKVN-----DGEWYH 577
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ + +++V+++ T PG SE D ++ +++GG P
Sbjct: 578 VDFQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 619
Score = 39 (18.8 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 270 HTIVAIKTKNVISVAVDSMTTDKP 293
H +VA K +NV ++ D +T + P
Sbjct: 466 HGVVAFKCENVATL--DPITFETP 487
>UNIPROTKB|Q9Y4C0 [details] [associations]
symbol:NRXN3 "Neurexin-3" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007411
"axon guidance" evidence=TAS] InterPro:IPR000742 InterPro:IPR027149
PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152 GO:GO:0007411
GO:GO:0005887 EMBL:CH471061 GO:GO:0046872 GO:GO:0007155
GO:GO:0004872 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007269 GO:GO:0005246 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 eggNOG:NOG302266
HOVERGEN:HBG052670 KO:K07377 CTD:9369 PANTHER:PTHR10127:SF405
EMBL:AJ316284 EMBL:AF099810 EMBL:AF123462 EMBL:AB018286
EMBL:AC008056 EMBL:AC012099 EMBL:AC009396 EMBL:AC008045
EMBL:AC011440 EMBL:AC026888 EMBL:BC152457 IPI:IPI00414249
IPI:IPI00854729 IPI:IPI01025492 RefSeq:NP_004787.2
UniGene:Hs.368307 HSSP:Q63373 ProteinModelPortal:Q9Y4C0 SMR:Q9Y4C0
IntAct:Q9Y4C0 STRING:Q9Y4C0 PhosphoSite:Q9Y4C0 DMDM:224471902
PaxDb:Q9Y4C0 PRIDE:Q9Y4C0 Ensembl:ENST00000335750
Ensembl:ENST00000554719 Ensembl:ENST00000554738 GeneID:9369
KEGG:hsa:9369 UCSC:uc001xun.3 GeneCards:GC14P078710 HGNC:HGNC:8010
HPA:HPA002727 MIM:600567 neXtProt:NX_Q9Y4C0 PharmGKB:PA31788
ChiTaRS:NRXN3 GenomeRNAi:9369 NextBio:35088 ArrayExpress:Q9Y4C0
Bgee:Q9Y4C0 CleanEx:HS_NRXN3 Genevestigator:Q9Y4C0
GermOnline:ENSG00000021645 Uniprot:Q9Y4C0
Length = 1643
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 49/172 (28%), Positives = 82/172 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS I+F D D++A+ + G IHY F
Sbjct: 877 TKSSYLSLATLQAYTSMHLFFQF--KTTSPDGFILFNSGDGN--DFIAVELVKGYIHYVF 932
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSG-KLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + D+ + D +WH V +R + LK+D +VV + + +K L++ G
Sbjct: 933 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVIN--GAKNLDLKG 990
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL---VQDKHTSSGVI 176
Y+ G+ + + + D F GCL ++ N +L + D SG I
Sbjct: 991 DLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQI 1042
Score = 157 (60.3 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 76/287 (26%), Positives = 115/287 (40%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 705 EAEDVSFRFMSQRAYGLLVATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNS 758
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D V AEG G L F+
Sbjct: 759 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLTVDDDV-AEGTMVGDHTRLE----FH- 811
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 812 -NIETGIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIA 870
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F Y+ + + M L K + G +L + D+ ++++ G +
Sbjct: 871 DPVTFKTKSSYLS-LATLQAYTSMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKGYIH 929
Query: 243 ATVDNGKGPISAIYTPSD-PYFFCDGQWHTIVAIK-TKNVISVAVDS 287
D G GP + I SD P D QWH +V + N S+ VD+
Sbjct: 930 YVFDLGNGP-NVIKGNSDRP--LNDNQWHNVVITRDNSNTHSLKVDT 973
Score = 154 (59.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 50/177 (28%), Positives = 86/177 (48%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D + +D+ A+ + DG ++ + G
Sbjct: 466 KRMGSISFDFRTT-EPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMG 524
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLG
Sbjct: 525 SGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GESEILDLEGDMYLG 583
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGV-IPCS 179
G+P N + L+ LN +VGC+R+L +S N + + + ++GV CS
Sbjct: 584 GLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCS 640
Score = 138 (53.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 53/216 (24%), Positives = 96/216 (44%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLIL 86
+ ++ KT +++G+I + K DYV L +KDG + N GSG + +
Sbjct: 282 EITLSFKTW-QRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN 338
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
D WH V+ +R + +DG + G ++ L FY+GG P +T+ L G+
Sbjct: 339 DNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-STADLP-GS- 395
Query: 147 GLNDTFVGCLRNL--KSNN---------KLVQDKHTSSG--VIPCSD-KTESGVFFYNSG 192
+++ F+GCL+ + K+N+ ++ K G V C + T + F
Sbjct: 396 PVSNNFMGCLKEVVYKNNDIRLELSRLARIADTKMKIYGEVVFKCENVATLDPINFETPE 455
Query: 193 GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
Y+ + ++ R + D + +GL+L H K
Sbjct: 456 AYIS-LPKWNTKRMGSISFDFRTTEPNGLILFTHGK 490
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 55/235 (23%), Positives = 101/235 (42%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
D S KT + G++ Y+ D D++ L + DG++ F+ A+ S +K + D
Sbjct: 50 DLSFQFKT-NVSTGLLLYLDDGGVCDFLCLSLVDGRVQLRFSMDCAETAVLS-NKQVNDS 107
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH + SR +L L +DG+ + GE + +++ +LGGVP + S L +
Sbjct: 108 SWHFLMVSRDRLRTVLMLDGEGQS-GELQPQRPYMDVVSDLFLGGVPTDIRPSALTLDGV 166
Query: 147 GLNDTFVGCLRNLKSNN---KLVQDKHTSSGVI-PCSDKT--ESGVFFYNSGGYVKGVEQ 200
F G + +LK N +L+ + PC ++ G+ F G
Sbjct: 167 QAMPGFKGLILDLKYGNSEPRLLGSRGVQMDAEGPCGERPCENGGICFLLDGHPTCDCST 226
Query: 201 FRVGREMELKMDV-KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISA 254
G ++ DV + +S L++S ++++ + GS D + PI +
Sbjct: 227 TGYGGKL-CSEDVSQDPGLSHLMMSEQAREEN--VATFRGSEYLCYDLSQNPIQS 278
Score = 84 (34.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KP+ ++K D+F ++++DG++ +D G G I T DG+W+ +
Sbjct: 490 KPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKAN---DGEWYHVD 546
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+S T P G SE D +++GG P
Sbjct: 547 IQRDGRSGTISVNSRRT--P-FTASGESEILDLEGDMYLGGLP 586
Score = 56 (24.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 40/185 (21%), Positives = 75/185 (40%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNIS--- 219
N+ + D T +G + + E+ + Y+ Y+K + + E E DV R +S
Sbjct: 663 NRFICDC-TGTGYWGRTCEREASILSYDGSMYMKIIMPMVMHTEAE---DVSFRFMSQRA 718
Query: 220 -GLLLSVHSKK--DYFILQMIDGSVKATV--DNGKGPISAIYTPSDPYF---FCDGQWHT 271
GLL++ S+ D L++ G VK V D + ++ P Y D +WHT
Sbjct: 719 YGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHT 778
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRR 331
+ ++ + + VD D +G H L + ++G T++R
Sbjct: 779 VRVVRRGKSLKLTVDD----------------DVAEGTMVGDHTRLEFHNIETGIMTEKR 822
Query: 332 SVFLI 336
+ ++
Sbjct: 823 YISVV 827
>UNIPROTKB|E2RC00 [details] [associations]
symbol:NRXN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] InterPro:IPR000742
InterPro:IPR027160 PROSITE:PS50026 SMART:SM00181 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 OMA:GGDCDFL PANTHER:PTHR10127:SF307
EMBL:AAEX03011644 Ensembl:ENSCAFT00000022782 Uniprot:E2RC00
Length = 1692
Score = 170 (64.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 47/158 (29%), Positives = 81/158 (51%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S+SS + T+ F KTT+ DG++ + + + D++ + + G IHY F
Sbjct: 904 SRSSYLALATLQAYASMHLFFQF--KTTAP-DGLLLFNSGNGN-DFIVIELVKGYIHYVF 959
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + DK + D +WH V SR + LKID + V + S G+ + L++ G
Sbjct: 960 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQ-HSNGA-RNLDLKG 1017
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GG+ N + + + D F GCL ++ N +L
Sbjct: 1018 ELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRL 1055
Score = 160 (61.4 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 73/291 (25%), Positives = 116/291 (39%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFN--C-------GSGPMALSSGDKLILDGEWHT 92
G++ + D + L + GQ+ + N C GP L +G KL D EWHT
Sbjct: 747 GLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLN-DNEWHT 805
Query: 93 VEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
V R+ S +L +D V EG+ G+ L F+ + T R + F
Sbjct: 806 VRVVRRGKSLQLSVDN-VTVEGQMAGAHTRLE----FH--NIETGIMTERRFISVVPSNF 858
Query: 153 VGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRVG 204
+G L L N + D+ + C G V F + Y+ + +
Sbjct: 859 IGHLSGLVFNGQPYMDQCKDGDITYCELNARFGLRAIVADPVTFKSRSSYL-ALATLQAY 917
Query: 205 REMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYF 263
M L K GLLL + + D+ +++++ G + D G GP S + SD
Sbjct: 918 ASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKGYIHYVFDLGNGP-SLMKGNSDKPV 976
Query: 264 FCDGQWHTIVAIKTK-NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
D QWH +V + NV ++ +DS T + G+ D ++IGG
Sbjct: 977 N-DNQWHNVVVSRDPGNVHTLKIDSRTVTQHS---NGARNLDLKGELYIGG 1023
Score = 127 (49.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLILDGEWHTVE 94
T +++G++ + K DYV L +K G + N GSG AL + D WH V
Sbjct: 315 TLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVR 372
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVG 154
+R + +DG + G ++ L FY+GG P NT+ L G+ +++ F+G
Sbjct: 373 VTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSP-NTADLP-GS-PVSNNFMG 429
Query: 155 CLRNL--KSNN-KLVQDKHTSSG 174
CL+++ K+N+ KL + G
Sbjct: 430 CLKDVVYKNNDFKLELSRLAKEG 452
Score = 126 (49.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 44/181 (24%), Positives = 83/181 (45%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV------------ADVKHIDYVALYVKDGQIHYSFNCG 72
K S+D +TT E +G++ + + + DY A+ + DG ++ + G
Sbjct: 492 KRTGSISLDFRTT-EPNGLLLFSQGRRAGAGAGSHSSAQRADYFAMELLDGYLYLLLDMG 550
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + L + + + DGEW V+F R G + ++ + + G S+ L++ YLG
Sbjct: 551 SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNSRSTPF-LATGESEILDLESELYLG 609
Query: 133 GVPLNTSTLVR-----GNLGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDK 181
G+P + L +VGC+R+L +S + + + + + G+ P CS +
Sbjct: 610 GLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGITPFCSRE 669
Query: 182 T 182
T
Sbjct: 670 T 670
Score = 125 (49.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 32/134 (23%), Positives = 57/134 (42%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++T + + ++ Y+ D D++ L + DG++ F A D D
Sbjct: 57 ELSFSLRTNATR-ALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPAADD 115
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V +R L +DG+V E + + + + ++GG+P + S L +
Sbjct: 116 RWHMVLLTRDARRTALAVDGEV-RSAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 174
Query: 147 GLNDTFVGCLRNLK 160
F G L NLK
Sbjct: 175 KYEPPFRGLLANLK 188
Score = 98 (39.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 28/110 (25%), Positives = 48/110 (43%)
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E+ L RN GL+L DY L + G+V ++ G G A+ P + F
Sbjct: 308 EITLAFRTLQRN--GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFN- 364
Query: 266 DGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
D WH + + ++++VD + T G + +++ +IGG P
Sbjct: 365 DNAWHDVRVTRNLRQVTISVDGILTTT-GYTQEDYTMLGSDDFFYIGGSP 413
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/88 (27%), Positives = 43/88 (48%)
Query: 228 KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS 287
+ DYF ++++DG + +D G G I + S DG+W + + S++V+S
Sbjct: 530 RADYFAMELLDGYLYLLLDMGSGGIK-LRASSRKVN--DGEWCHVDFQRDGRKGSISVNS 586
Query: 288 MTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+T P L S D + +++GG P
Sbjct: 587 RST--PFLATGESEILDLESELYLGGLP 612
Score = 73 (30.8 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 30/137 (21%), Positives = 62/137 (45%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREME-LKMDVKPRNISGL 221
N+ V D +G + + E+ V Y+ Y+K + + E E + + + GL
Sbjct: 690 NRFVCDC-VGTGFLGRVCEREATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGL 748
Query: 222 LLSVHSKK--DYFILQMIDGSVKATVDN-----GKGPISAIYTPSDPYFFCDGQWHTIVA 274
+++ S++ D L++ G +K TV+ G P T + D +WHT+
Sbjct: 749 MMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLNDNEWHTVRV 808
Query: 275 IKTKNVISVAVDSMTTD 291
++ + ++VD++T +
Sbjct: 809 VRRGKSLQLSVDNVTVE 825
>UNIPROTKB|D0PRN3 [details] [associations]
symbol:D0PRN3 "Neurexin-3" species:9031 "Gallus gallus"
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR027149
Pfam:PF00008 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0046872 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210 InterPro:IPR003585
SMART:SM00294 eggNOG:NOG302266 KO:K07377 EMBL:EU702428
IPI:IPI00571879 RefSeq:NP_001258852.1 RefSeq:XP_421297.3
UniGene:Gga.55565 UniGene:Gga.5608 ProteinModelPortal:D0PRN3
GeneID:423385 KEGG:gga:423385 CTD:9369 PANTHER:PTHR10127:SF405
Uniprot:D0PRN3
Length = 1693
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 82/314 (26%), Positives = 124/314 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 724 EAEDVSFRFMSQRAYGLLMATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNA 777
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D V AEG G L F+
Sbjct: 778 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLMVDDDV-AEGTMVGDHTRLE----FH- 830
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 831 -NIETGIMTEKRYISVIPSSFIGHLQSLMFNGMLYIDLCKNGDIDYCELKARFGLRNIIA 889
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F Y+ + + M L K + G +L + D+ ++++ G +
Sbjct: 890 DPVTFKTKSSYLS-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGNDFIAVELVKGYIH 948
Query: 243 ATVDNGKGPISAIYTPSD-PYFFCDGQWHTIVAIK-TKNVISVAVDS-MTTDKPGLGPPG 299
D G GP + I SD P D QWH +V + N S+ VD+ M T G
Sbjct: 949 YVFDLGNGP-NVIKGNSDRP--LNDNQWHNVVITRDNSNTHSLKVDTKMVTQVIN----G 1001
Query: 300 SSETDTNNAVFIGG 313
+ D ++I G
Sbjct: 1002 AKNLDLKGDLYIAG 1015
Score = 159 (61.0 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS I+F D D++A+ + G IHY F
Sbjct: 896 TKSSYLSLATLQAYTSMHLFFQF--KTTSADGFILFNSGDGN--DFIAVELVKGYIHYVF 951
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSG-KLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + D+ + D +WH V +R + LK+D ++V + + +K L++ G
Sbjct: 952 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKMVTQVIN--GAKNLDLKG 1009
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL---VQDKHTSSGVI 176
Y+ G+ + + + D F GCL ++ N +L + D SG I
Sbjct: 1010 DLYIAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQI 1061
Score = 154 (59.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 50/177 (28%), Positives = 86/177 (48%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D + +D+ A+ + DG ++ + G
Sbjct: 485 KRMGSISFDFRTT-EPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMG 543
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLG
Sbjct: 544 SGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GESEILDLEGDMYLG 602
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGV-IPCS 179
G+P N + L+ LN +VGC+R+L +S N + + + ++GV CS
Sbjct: 603 GLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEAQNAAGVKSSCS 659
Score = 136 (52.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 38/137 (27%), Positives = 61/137 (44%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S KT G++ Y D D++ L + DG+I F+ + + DK + D
Sbjct: 50 ELSFQFKTNVSA-GLLLYFDDGGVCDFLCLSLVDGRIQLQFSVDCAETTVIT-DKQVNDS 107
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH + SR L L +DG+ GE + + +NI ++GGVP + + L +
Sbjct: 108 NWHFLMVSRNHLRTVLVLDGEA-KPGEVRPQRQYMNIVSDLFVGGVPSYIRPAALTLDGV 166
Query: 147 GLNDTFVGCLRNLKSNN 163
F G + NLK N
Sbjct: 167 LSEPPFQGFILNLKYGN 183
Score = 86 (35.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + DG+V ++ G G AI P + F D
Sbjct: 286 EITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DN 344
Query: 268 QWHTIVAIKTKNV 280
WH + T+N+
Sbjct: 345 AWHDVKV--TRNL 355
Score = 84 (34.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KP+ ++K D+F ++++DG++ +D G G I T DG+W+ +
Sbjct: 509 KPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKAN---DGEWYHVD 565
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+S T P G SE D +++GG P
Sbjct: 566 IQRDGRSGTISVNSRRT--P-FTASGESEILDLEGDMYLGGLP 605
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMA--LSSGDKLIL 86
+ ++ KT +++G+I + K DYV L +KDG + N GSG + +
Sbjct: 286 EITLSFKTW-QRNGLILHTG--KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN 342
Query: 87 DGEWHTVEFSR--QQLSG 102
D WH V+ +R +Q SG
Sbjct: 343 DNAWHDVKVTRNLRQHSG 360
Score = 64 (27.6 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 41/171 (23%), Positives = 73/171 (42%)
Query: 87 DGEWHTVEFSR--QQLSG-------KL------KIDGQVVAEGESKGSSKTLNIFGPFYL 131
D WH V+ +R +Q SG KL +DG + G ++ L FY+
Sbjct: 343 DNAWHDVKVTRNLRQHSGIGHAMVNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYV 402
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNL--KSNN------KLVQDKHTSSGV-----IPC 178
GG P +T+ L G+ +++ F+GCL+ + K+N+ +L + T + C
Sbjct: 403 GGSP-STADLP-GS-PVSNNFMGCLKEVVYKNNDIRLELSRLARIGDTKMKIYGEVKFVC 459
Query: 179 SD-KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
+ T + F Y+ + ++ R + D + +GL+L H K
Sbjct: 460 ENVATLDPISFETPEAYIS-LPKWNTKRMGSISFDFRTTEPNGLILFTHGK 509
Score = 60 (26.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 42/185 (22%), Positives = 75/185 (40%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNIS--- 219
N+ + D T +G + + E+ + Y+ Y+K + + E E DV R +S
Sbjct: 682 NRFICDC-TGTGYWGRTCEREASILSYDGSMYMKIIMPMVMHTEAE---DVSFRFMSQRA 737
Query: 220 -GLLLSVHSKK--DYFILQMIDGSVKATV--DNGKGPISAIYTPSDPYF---FCDGQWHT 271
GLL++ S+ D L++ G VK V D + +A P Y D +WHT
Sbjct: 738 YGLLMATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNASKGPETLYAGQKLNDNEWHT 797
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRR 331
+ ++ + + VD D +G H L + ++G T++R
Sbjct: 798 VRVVRRGKSLKLMVDD----------------DVAEGTMVGDHTRLEFHNIETGIMTEKR 841
Query: 332 SVFLI 336
+ +I
Sbjct: 842 YISVI 846
Score = 37 (18.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 237 IDGSVKATVDNGK--GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPG 294
I G VK +N PIS TP + Y +W+T K + S++ D TT+ G
Sbjct: 451 IYGEVKFVCENVATLDPIS-FETP-EAYISLP-KWNT------KRMGSISFDFRTTEPNG 501
Query: 295 L 295
L
Sbjct: 502 L 502
>ZFIN|ZDB-GENE-070206-9 [details] [associations]
symbol:nrxn3a "neurexin 3a" species:7955 "Danio
rerio" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181
ZFIN:ZDB-GENE-070206-9 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:CR536614 EMBL:CR381576 EMBL:BX571723
EMBL:CABZ01007637 EMBL:CABZ01007638 EMBL:CABZ01059373
EMBL:CABZ01059374 EMBL:CABZ01059375 EMBL:CABZ01059376
EMBL:CABZ01059377 EMBL:CR936419 EMBL:CT573309 IPI:IPI00829166
Ensembl:ENSDART00000088179 Bgee:F1QYQ7 Uniprot:F1QYQ7
Length = 1697
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 68/256 (26%), Positives = 105/256 (41%)
Query: 70 NCGS--GPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
NC S GP L +G KL D EWHTV R+ S KL +D V AEG+ G L
Sbjct: 770 NCNSSKGPETLYAGQKLN-DNEWHTVRVIRRGKSYKLTVDDDV-AEGQMVGDHTRLE--- 824
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG-- 185
F+ + T R + +F+G L++LK N L D + + C G
Sbjct: 825 -FH--NIETGVMTERRFVSMIPSSFIGHLQSLKFNGLLYIDLCKNGDIDFCELNARFGMR 881
Query: 186 ------VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMID 238
V F + Y+ + + M L K + G +L + D+ ++++
Sbjct: 882 SIIADPVTFKSKNSYLS-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGSDFIAVELVK 940
Query: 239 GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGP 297
G + + G GP + I S+ D QWH +V + NV ++ VD+ +
Sbjct: 941 GYIHYVFNLGNGP-NVIKGNSERALH-DNQWHNVVITRDNSNVHTLKVDAKAVSQV---V 995
Query: 298 PGSSETDTNNAVFIGG 313
G+ D +FI G
Sbjct: 996 NGAKNLDLKGDLFIAG 1011
Score = 159 (61.0 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
SK+S + T+ F KTTS I+F D D++A+ + G IHY F
Sbjct: 892 SKNSYLSLATLQAYTSMHLFFQF--KTTSADGFILFNSGDGS--DFIAVELVKGYIHYVF 947
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
N G+GP + + ++ + D +WH V +R + LK+D + V++ + +K L++ G
Sbjct: 948 NLGNGPNVIKGNSERALHDNQWHNVVITRDNSNVHTLKVDAKAVSQVVN--GAKNLDLKG 1005
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL---VQDKHTSSGVI 176
++ G+ N + + + F GCL ++ N +L + D SG I
Sbjct: 1006 DLFIAGLGPNMYNNLPKLVASREGFKGCLASVDLNGRLPDLINDALFRSGQI 1057
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 44/178 (24%), Positives = 85/178 (47%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D + +D+ A+ + DG ++ + G
Sbjct: 481 KRMGSISFDFRTT-EPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGSLYLLLDMG 539
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + + DG W+ V+ R SG + ++ + S G ++ L++ G YLG
Sbjct: 540 SGTIKVKATQNKVNDGAWYHVDIQRDGRSGTISVNSRRTPFTAS-GENEILDLEGDMYLG 598
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIPCSDK 181
G+P + +L+ LN +VGC+R+L +S + + + + +G+ P +K
Sbjct: 599 GLPDSRGSLILPTELWTAMLNYGYVGCIRDLFIDGRSKDIRQIAEAQNGAGIKPSCNK 656
Score = 135 (52.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 41/138 (29%), Positives = 60/138 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
D S KT +I Y D D++ L V +G++ F+ + S DK + D
Sbjct: 46 DLSFQFKT-DVSTALILYFDDGGFCDFLQLMVVEGKLQLQFSIDCAETTVVS-DKRVNDS 103
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH+ SR L L +DG V E + + + I +LGGVP + S L +
Sbjct: 104 SWHSATLSRYNLRTVLGLDG-VSKWAEVRPLRQYMKIVSDLFLGGVPQDIRISVLTLPTV 162
Query: 147 GLNDTFVGCLRNLKSNNK 164
F G +R LK N+K
Sbjct: 163 KDLPPFKGIIRELKYNSK 180
Score = 87 (35.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + DG+V ++ G G AI P + F D
Sbjct: 282 EITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFN-DN 340
Query: 268 QWHTIVAIKTKNV 280
WH + T+N+
Sbjct: 341 SWHDVKV--TRNL 351
Score = 81 (33.6 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KP+ ++K D+F ++++DGS+ +D G G I T + DG W+ +
Sbjct: 505 KPQERKDARSQKNTKVDFFAVELLDGSLYLLLDMGSGTIKVKATQNKVN---DGAWYHVD 561
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+S T P G +E D +++GG P
Sbjct: 562 IQRDGRSGTISVNSRRT--P-FTASGENEILDLEGDMYLGGLP 601
Score = 71 (30.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 43/182 (23%), Positives = 75/182 (41%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREME-LKMDVKPRNISGL 221
N+ + D T +G + + E+ + Y+ Y+K V + E E + + + GL
Sbjct: 678 NRFICDC-TGTGYWSRTCEREASILSYDGSMYMKVVMPTVMHTEAEDVSLRFMSQRAYGL 736
Query: 222 LLSVHSKKDYFILQM-IDGS-VKATV--DNGKGPISAIYTPSDPYF---FCDGQWHTIVA 274
L++ S+ L++ +DGS VK TV D + ++ P Y D +WHT+
Sbjct: 737 LMATTSRDSADTLRLELDGSRVKLTVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRV 796
Query: 275 IKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRRSVF 334
I+ + VD D +G H L + ++G T+RR V
Sbjct: 797 IRRGKSYKLTVDD----------------DVAEGQMVGDHTRLEFHNIETGVMTERRFVS 840
Query: 335 LI 336
+I
Sbjct: 841 MI 842
>UNIPROTKB|F1MMZ4 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9913 "Bos taurus"
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007269 "neurotransmitter secretion" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
EMBL:DAAA02030804 EMBL:DAAA02030805 EMBL:DAAA02030806
EMBL:DAAA02030807 IPI:IPI00924356 Ensembl:ENSBTAT00000061495
Uniprot:F1MMZ4
Length = 836
Score = 168 (64.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 214 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 272
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 273 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 331
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 332 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRET 391
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 453 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 506
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 507 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 560
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 561 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 619
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 620 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 678
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 679 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 733
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 734 NLDLKSDLYIGG 745
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 626 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 681
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 682 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 739
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 740 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 794
Score = 126 (49.4 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 52/216 (24%), Positives = 99/216 (45%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 30 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 86
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
D WH V+ +R + +DG + G ++ L FY+GG P +T+ L G+
Sbjct: 87 DNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-STADLP-GS- 143
Query: 147 GLNDTFVGCLRNL--KSNN------KLVQD---KHTSSGVIP--CSD-KTESGVFFYNSG 192
+++ F+GCL+ + K+N+ +L + K GV+ C + T + F
Sbjct: 144 PVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPE 203
Query: 193 GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
++ + ++ + + D + +GL+L H K
Sbjct: 204 SFIS-LPKWNAKKTGSISFDFRTTEPNGLILFSHGK 238
Score = 84 (34.6 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 238 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 294
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+++ T PG SE D ++ +++GG P
Sbjct: 295 FQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 334
>UNIPROTKB|F1MT47 [details] [associations]
symbol:NRXN1 "Neurexin-1-beta" species:9913 "Bos taurus"
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007269 "neurotransmitter secretion" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
EMBL:DAAA02030804 EMBL:DAAA02030805 EMBL:DAAA02030806
EMBL:DAAA02030807 IPI:IPI00924356 Ensembl:ENSBTAT00000033082
OMA:GPLCNDR Uniprot:F1MT47
Length = 851
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 229 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 287
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 288 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 346
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 347 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRET 406
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 468 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 521
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 522 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 575
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 576 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 634
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 635 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 693
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 694 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 748
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 749 NLDLKSDLYIGG 760
Score = 148 (57.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 641 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 696
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 697 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 754
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 755 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 809
Score = 84 (34.6 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 253 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 309
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+++ T PG SE D ++ +++GG P
Sbjct: 310 FQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 349
Score = 80 (33.2 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 30 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 86
Query: 87 DGEWHTVEFSR--QQLSG-------KLKIDGQVVAEG--ESKG-SSKTLNIFGP--FYLG 132
D WH V+ +R +Q SG KL + +G + G + + + G F+
Sbjct: 87 DNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYV 146
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167
G +T+ L G+ +++ F+GCL+ + N V+
Sbjct: 147 GGSPSTADLP-GS-PVSNNFMGCLKEVVYKNNDVR 179
>UNIPROTKB|Q28146 [details] [associations]
symbol:NRXN1 "Neurexin-1" species:9913 "Bos taurus"
[GO:0097109 "neuroligin family protein binding" evidence=IPI]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] [GO:0007416 "synapse assembly"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0046872 GO:GO:0030054 GO:GO:0007155 GO:GO:0042734
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 eggNOG:NOG302266
HOGENOM:HOG000230481 HOVERGEN:HBG052670 KO:K07377 OrthoDB:EOG41G339
PANTHER:PTHR10127:SF309 EMBL:L14855 IPI:IPI00691987 IPI:IPI00694649
IPI:IPI00699150 IPI:IPI00702399 IPI:IPI00704131 IPI:IPI00707999
IPI:IPI00708029 IPI:IPI00709925 IPI:IPI00711380 IPI:IPI00713374
IPI:IPI00714819 IPI:IPI00716804 PIR:I45944 RefSeq:NP_776829.1
UniGene:Bt.5497 PDB:2H0B PDB:2R16 PDB:3ASI PDB:3POY PDB:3QCW
PDB:3R05 PDBsum:2H0B PDBsum:2R16 PDBsum:3ASI PDBsum:3POY
PDBsum:3QCW PDBsum:3R05 ProteinModelPortal:Q28146 SMR:Q28146
DIP:DIP-59135N STRING:Q28146 PRIDE:Q28146 GeneID:281950
KEGG:bta:281950 CTD:9378 InParanoid:Q28146 EvolutionaryTrace:Q28146
NextBio:20805826 Uniprot:Q28146
Length = 1530
Score = 168 (64.2 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 522 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 580
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 581 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESQILDLDDELYLG 639
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 640 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRET 699
Score = 160 (61.4 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 761 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 814
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 815 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 868
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 869 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 927
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 928 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 986
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 987 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 1041
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 1042 NLDLKSDLYIGG 1053
Score = 148 (57.2 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 934 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 989
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 990 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1047
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 1048 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 1102
Score = 136 (52.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 49/173 (28%), Positives = 80/173 (46%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG---QIHYSFNCGSGPMALSSGDKLI 85
+ S +KT S + G++ Y D D++ L + G Q+ +S C P L + D +
Sbjct: 53 EMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAE-PATLLT-DTPV 109
Query: 86 LDGEWHTVEFSRQQLSGKLKIDGQVVAEG-ESKGSSKTLNIFGPFYLGGVP--LNTSTL- 141
DG WH V RQ + L ID QV A+ E K + + +F ++GG+P L + L
Sbjct: 110 NDGAWHNVRIRRQFRNTTLFID-QVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALK 168
Query: 142 -VRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGG 193
++ + F G +R+++ N+ L SG + D+ NSGG
Sbjct: 169 LTLASVREREPFKGWIRDVRVNSSLALP--VDSGEVKLDDEPP------NSGG 213
Score = 84 (34.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 546 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 602
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+ +++V+++ T P P S D ++ +++GG P
Sbjct: 603 FQRDGRSGTISVNTLRT--PYTAPGESQILDLDDELYLGGLP 642
Score = 80 (33.2 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 323 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 381
Query: 268 QWHTIVAIKTKNV 280
WH + T+N+
Sbjct: 382 AWHDVKV--TRNL 392
Score = 44 (20.5 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 13/60 (21%), Positives = 27/60 (45%)
Query: 195 VKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISA 254
V+G+ +G + + K D ++ L++ K++Y + GS D + PI +
Sbjct: 262 VEGLAHLMMGDQGKSKEDNNVEGLAHLMMGDQGKEEY--IATFKGSEYFCYDLSQNPIQS 319
Score = 39 (18.8 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 270 HTIVAIKTKNVISVAVDSMTTDKP 293
H +VA K +NV ++ D +T + P
Sbjct: 489 HGVVAFKCENVATL--DPITFETP 510
>UNIPROTKB|F1PJQ3 [details] [associations]
symbol:NRXN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] [GO:0007416 "synapse assembly"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026
SMART:SM00181 InterPro:IPR000152 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
OMA:GPLCNDR EMBL:AAEX03007511 Ensembl:ENSCAFT00000004299
Uniprot:F1PJQ3
Length = 811
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 179 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 237
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 238 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 296
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 297 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRET 356
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 418 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 471
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 472 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 525
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 526 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 584
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 585 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 643
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 644 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 698
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 699 NLDLKSDLYIGG 710
Score = 148 (57.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 591 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 646
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 647 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 704
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 705 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 759
Score = 106 (42.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 51 KHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLILDGEWHTVEFSR--QQLSG---- 102
K DYV L +K+G + N GSG AL + D WH V+ +R +Q SG
Sbjct: 6 KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHA 65
Query: 103 --KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLK 160
+ +DG + G ++ L FY+GG P +T+ L G+ +++ F+GCL+ +
Sbjct: 66 MVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-STADLP-GS-PVSNNFMGCLKEVV 122
Query: 161 SNNKLVQ 167
N V+
Sbjct: 123 YKNNDVR 129
Score = 84 (34.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 203 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 259
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+++ T PG SE D ++ +++GG P
Sbjct: 260 FQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 299
>UNIPROTKB|F1M3K8 [details] [associations]
symbol:F1M3K8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0051965 "positive regulation of synapse assembly" evidence=IEA]
[GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026
SMART:SM00181 InterPro:IPR000152 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
IPI:IPI00208055 Ensembl:ENSRNOT00000050128 ArrayExpress:F1M3K8
Uniprot:F1M3K8
Length = 836
Score = 167 (63.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 214 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 272
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 273 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 331
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 332 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRET 391
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 453 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 506
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 507 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 560
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 561 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 619
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 620 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 678
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 679 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 733
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 734 NLDLKSDLYIGG 745
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 626 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 681
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 682 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 739
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 740 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 794
Score = 126 (49.4 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 52/216 (24%), Positives = 99/216 (45%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 30 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 86
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
D WH V+ +R + +DG + G ++ L FY+GG P +T+ L G+
Sbjct: 87 DNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-STADLP-GS- 143
Query: 147 GLNDTFVGCLRNL--KSNN------KLVQD---KHTSSGVIP--CSD-KTESGVFFYNSG 192
+++ F+GCL+ + K+N+ +L + K GV+ C + T + F
Sbjct: 144 PVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPE 203
Query: 193 GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
++ + ++ + + D + +GL+L H K
Sbjct: 204 SFIS-LPKWNAKKTGSISFDFRTTEPNGLILFSHGK 238
Score = 84 (34.6 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 238 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 294
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+++ T PG SE D ++ +++GG P
Sbjct: 295 FQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 334
>UNIPROTKB|F1NNM6 [details] [associations]
symbol:NRXN1 "Neurexin-1" species:9031 "Gallus gallus"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0051965 "positive regulation
of synapse assembly" evidence=IEA] [GO:0090129 "positive regulation
of synapse maturation" evidence=IEA] InterPro:IPR000742
InterPro:IPR027158 Pfam:PF00008 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
EMBL:AADN02036293 EMBL:AADN02036298 EMBL:AADN02036299
EMBL:AADN02036300 EMBL:AADN02036301 EMBL:AADN02036302
EMBL:AADN02036303 EMBL:AC157664 EMBL:AC157952 IPI:IPI01017378
Ensembl:ENSGALT00000031962 ArrayExpress:F1NNM6 Uniprot:F1NNM6
Length = 854
Score = 167 (63.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 221 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLLDMG 279
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 280 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDDLYLG 338
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 339 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRET 398
Score = 165 (63.1 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 75/312 (24%), Positives = 125/312 (40%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS + AD ++ V L V I + N
Sbjct: 460 EAEDVSLRFRSQRAYGILMATTSRES------ADTLRLELDAGRVKLTVNLDCIRINCNS 513
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 514 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLMVDDQQAMTGQMAGDHTRLE----FH- 567
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 568 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 626
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 627 DPVTFKTKASYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 685
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 686 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTNNLHTVKIDTKITTQ---STAGAR 740
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 741 NLDLKSDLYIGG 752
Score = 148 (57.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTV 93
KTTS DG+I Y + + D++ + + G +HY F+ G+G + S +K + D +WH V
Sbjct: 656 KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNV 713
Query: 94 EFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
SR + +KID ++ + S ++ L++ Y+GGV + + + F
Sbjct: 714 MISRDTNNLHTVKIDTKITTQ--STAGARNLDLKSDLYIGGVAKEMYKSLPKLVHAKEGF 771
Query: 153 VGCLRNLKSNNKL---VQDKHTSSGVIP--CSDK 181
GCL ++ N +L + D +G I C DK
Sbjct: 772 QGCLASVDLNGRLPDLISDALFCNGQIERGCEDK 805
Score = 126 (49.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 52/216 (24%), Positives = 99/216 (45%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 37 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 93
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
D WH V+ +R + +DG + G ++ L FY+GG P +T+ L G+
Sbjct: 94 DNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-STADLP-GS- 150
Query: 147 GLNDTFVGCLRNL--KSNN------KLVQD---KHTSSGVIP--CSD-KTESGVFFYNSG 192
+++ F+GCL+ + K+N+ +L + K GV+ C + T + F
Sbjct: 151 PVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPE 210
Query: 193 GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
++ + ++ + + D + +GL+L H K
Sbjct: 211 SFIS-LPKWNAKKTGSISFDFRTTEPNGLILFSHGK 245
Score = 83 (34.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 245 KPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 301
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+++ T PG SE D ++ +++GG P
Sbjct: 302 FQRDGRSGTISVNTLRTPYTA---PGESEILDLDDDLYLGGLP 341
>UNIPROTKB|G5E9G7 [details] [associations]
symbol:NRXN2 "Neurexin-2" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR027160 PROSITE:PS50026
SMART:SM00181 GO:GO:0016021 EMBL:CH471076 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 EMBL:AP001462 UniGene:Hs.372938
HGNC:HGNC:8009 ChiTaRS:NRXN2 PANTHER:PTHR10127:SF307 EMBL:AP001092
ProteinModelPortal:G5E9G7 SMR:G5E9G7 Ensembl:ENST00000409571
ArrayExpress:G5E9G7 Bgee:G5E9G7 Uniprot:G5E9G7
Length = 1705
Score = 170 (64.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 47/158 (29%), Positives = 81/158 (51%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S+SS + T+ F KTT+ DG++ + + + D++ + + G IHY F
Sbjct: 917 SRSSYLALATLQAYASMHLFFQF--KTTAP-DGLLLFNSGNGN-DFIVIELVKGYIHYVF 972
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + DK + D +WH V SR + LKID + V + S G+ + L++ G
Sbjct: 973 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQ-HSNGA-RNLDLKG 1030
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GG+ N + + + D F GCL ++ N +L
Sbjct: 1031 ELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRL 1068
Score = 160 (61.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 73/291 (25%), Positives = 116/291 (39%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFN--C-------GSGPMALSSGDKLILDGEWHT 92
G++ + D + L + GQ+ + N C GP L +G KL D EWHT
Sbjct: 760 GLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLN-DNEWHT 818
Query: 93 VEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
V R+ S +L +D V EG+ G+ L F+ + T R + F
Sbjct: 819 VRVVRRGKSLQLSVDN-VTVEGQMAGAHMRLE----FH--NIETGIMTERRFISVVPSNF 871
Query: 153 VGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRVG 204
+G L L N + D+ + C G V F + Y+ + +
Sbjct: 872 IGHLSGLVFNGQPYMDQCKDGDITYCELNARFGLRAIVADPVTFKSRSSYL-ALATLQAY 930
Query: 205 REMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYF 263
M L K GLLL + + D+ +++++ G + D G GP S + SD
Sbjct: 931 ASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKGYIHYVFDLGNGP-SLMKGNSDKPV 989
Query: 264 FCDGQWHTIVAIKTK-NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
D QWH +V + NV ++ +DS T + G+ D ++IGG
Sbjct: 990 N-DNQWHNVVVSRDPGNVHTLKIDSRTVTQHS---NGARNLDLKGELYIGG 1036
Score = 128 (50.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 45/181 (24%), Positives = 83/181 (45%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV------------ADVKHIDYVALYVKDGQIHYSFNCG 72
K S+D +TT E +G++ + + + DY A+ + DG ++ + G
Sbjct: 505 KRTGSISLDFRTT-EPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMG 563
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + L + + + DGEW V+F R G + ++ + + G S+ L++ YLG
Sbjct: 564 SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNSRSTPF-LATGDSEILDLESELYLG 622
Query: 133 GVPLNTSTLVR-----GNLGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDK 181
G+P + L +VGC+R+L +S + + + + + GV P CS +
Sbjct: 623 GLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRE 682
Query: 182 T 182
T
Sbjct: 683 T 683
Score = 127 (49.8 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 32/134 (23%), Positives = 58/134 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++T + + ++ Y+ D D++ L + DG++ F A D + D
Sbjct: 52 ELSFSLRTNATR-ALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADD 110
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V +R L +DG+ A E + + + + ++GG+P + S L +
Sbjct: 111 RWHMVLLTRDARRTALAVDGEARA-AEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 169
Query: 147 GLNDTFVGCLRNLK 160
F G L NLK
Sbjct: 170 KYEPPFRGLLANLK 183
Score = 114 (45.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 44/151 (29%), Positives = 74/151 (49%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLILDGEWHTVE 94
T +++G++ + K DYV L +K G + N GSG AL + D WH V
Sbjct: 320 TLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVR 377
Query: 95 FSR--QQLSG------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
+R +Q +G + +DG + G ++ L FY+GG P NT+ L G+
Sbjct: 378 VTRNLRQHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSP-NTADLP-GS- 434
Query: 147 GLNDTFVGCLRNL--KSNN-KLVQDKHTSSG 174
+++ F+GCL+++ K+N+ KL + G
Sbjct: 435 PVSNNFMGCLKDVVYKNNDFKLELSRLAKEG 465
Score = 80 (33.2 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 24/88 (27%), Positives = 43/88 (48%)
Query: 228 KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS 287
+ DYF ++++DG + +D G G I + S DG+W + + S++V+S
Sbjct: 543 RADYFAMELLDGHLYLLLDMGSGGIK-LRASSRKVN--DGEWCHVDFQRDGRKGSISVNS 599
Query: 288 MTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+T P L S D + +++GG P
Sbjct: 600 RST--PFLATGDSEILDLESELYLGGLP 625
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/118 (23%), Positives = 49/118 (41%)
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E+ L RN GL+L DY L + G+V ++ G G A+ P + F
Sbjct: 313 EITLAFRTLQRN--GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFN- 369
Query: 266 DGQWHTIVAIKTKN--------VISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
D WH + + +++++VD + T G + +++ +IGG P
Sbjct: 370 DNAWHDVRVTRNLRQHAGIGHAMVTISVDGILTTT-GYTQEDYTMLGSDDFFYIGGSP 426
Score = 72 (30.4 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 26/117 (22%), Positives = 54/117 (46%)
Query: 183 ESGVFFYNSGGYVKGVEQFRVGREME-LKMDVKPRNISGLLLSVHSKK--DYFILQMIDG 239
E+ V Y+ Y+K + + E E + + + GL+++ S++ D L++ G
Sbjct: 722 EATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 781
Query: 240 SVKATVDN-----GKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD 291
+K TV+ G P T + D +WHT+ ++ + ++VD++T +
Sbjct: 782 QMKLTVNLDCLRVGCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVE 838
>UNIPROTKB|Q9P2S2 [details] [associations]
symbol:NRXN2 "Neurexin-2" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0097118 "neuroligin clustering" evidence=ISS]
[GO:0097119 "postsynaptic density protein 95 clustering"
evidence=ISS] [GO:0097104 "postsynaptic membrane assembly"
evidence=ISS] [GO:0097116 "gephyrin clustering" evidence=ISS]
[GO:0050839 "cell adhesion molecule binding" evidence=ISS]
InterPro:IPR000742 InterPro:IPR027160 PROSITE:PS50026 SMART:SM00181
GO:GO:0016021 GO:GO:0046872 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0050839 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0007269 GO:GO:0005246
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0097119
GO:GO:0097104 GO:GO:0097116 eggNOG:NOG302266 HOGENOM:HOG000230481
HOVERGEN:HBG052670 KO:K07377 OrthoDB:EOG41G339 GO:GO:0097118
EMBL:AB035266 EMBL:AB023138 EMBL:AC044790 EMBL:BC150275
IPI:IPI00007921 IPI:IPI00185612 RefSeq:NP_055895.1
RefSeq:NP_620060.1 UniGene:Hs.372938 ProteinModelPortal:Q9P2S2
SMR:Q9P2S2 IntAct:Q9P2S2 MINT:MINT-1381393 STRING:Q9P2S2
PhosphoSite:Q9P2S2 DMDM:17369343 PaxDb:Q9P2S2 PRIDE:Q9P2S2
Ensembl:ENST00000265459 Ensembl:ENST00000377551
Ensembl:ENST00000377559 GeneID:9379 KEGG:hsa:9379 UCSC:uc001oas.3
UCSC:uc021qkw.1 CTD:9379 GeneCards:GC11M064373 HGNC:HGNC:8009
MIM:600566 neXtProt:NX_Q9P2S2 PharmGKB:PA31787 InParanoid:Q9P2S2
OMA:GGDCDFL ChiTaRS:NRXN2 GenomeRNAi:9379 NextBio:35140
ArrayExpress:Q9P2S2 Bgee:Q9P2S2 CleanEx:HS_NRXN2
Genevestigator:Q9P2S2 GermOnline:ENSG00000110076
PANTHER:PTHR10127:SF307 Uniprot:Q9P2S2
Length = 1712
Score = 170 (64.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 47/158 (29%), Positives = 81/158 (51%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S+SS + T+ F KTT+ DG++ + + + D++ + + G IHY F
Sbjct: 924 SRSSYLALATLQAYASMHLFFQF--KTTAP-DGLLLFNSGNGN-DFIVIELVKGYIHYVF 979
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + DK + D +WH V SR + LKID + V + S G+ + L++ G
Sbjct: 980 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQ-HSNGA-RNLDLKG 1037
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GG+ N + + + D F GCL ++ N +L
Sbjct: 1038 ELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRL 1075
Score = 160 (61.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 73/291 (25%), Positives = 116/291 (39%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFN--C-------GSGPMALSSGDKLILDGEWHT 92
G++ + D + L + GQ+ + N C GP L +G KL D EWHT
Sbjct: 767 GLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLN-DNEWHT 825
Query: 93 VEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
V R+ S +L +D V EG+ G+ L F+ + T R + F
Sbjct: 826 VRVVRRGKSLQLSVDN-VTVEGQMAGAHMRLE----FH--NIETGIMTERRFISVVPSNF 878
Query: 153 VGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRVG 204
+G L L N + D+ + C G V F + Y+ + +
Sbjct: 879 IGHLSGLVFNGQPYMDQCKDGDITYCELNARFGLRAIVADPVTFKSRSSYL-ALATLQAY 937
Query: 205 REMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYF 263
M L K GLLL + + D+ +++++ G + D G GP S + SD
Sbjct: 938 ASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKGYIHYVFDLGNGP-SLMKGNSDKPV 996
Query: 264 FCDGQWHTIVAIKTK-NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
D QWH +V + NV ++ +DS T + G+ D ++IGG
Sbjct: 997 N-DNQWHNVVVSRDPGNVHTLKIDSRTVTQHS---NGARNLDLKGELYIGG 1043
Score = 128 (50.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 45/181 (24%), Positives = 83/181 (45%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV------------ADVKHIDYVALYVKDGQIHYSFNCG 72
K S+D +TT E +G++ + + + DY A+ + DG ++ + G
Sbjct: 512 KRTGSISLDFRTT-EPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMG 570
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + L + + + DGEW V+F R G + ++ + + G S+ L++ YLG
Sbjct: 571 SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNSRSTPF-LATGDSEILDLESELYLG 629
Query: 133 GVPLNTSTLVR-----GNLGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDK 181
G+P + L +VGC+R+L +S + + + + + GV P CS +
Sbjct: 630 GLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRE 689
Query: 182 T 182
T
Sbjct: 690 T 690
Score = 127 (49.8 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 32/134 (23%), Positives = 58/134 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++T + + ++ Y+ D D++ L + DG++ F A D + D
Sbjct: 52 ELSFSLRTNATR-ALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADD 110
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V +R L +DG+ A E + + + + ++GG+P + S L +
Sbjct: 111 RWHMVLLTRDARRTALAVDGEARA-AEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 169
Query: 147 GLNDTFVGCLRNLK 160
F G L NLK
Sbjct: 170 KYEPPFRGLLANLK 183
Score = 80 (33.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 24/88 (27%), Positives = 43/88 (48%)
Query: 228 KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS 287
+ DYF ++++DG + +D G G I + S DG+W + + S++V+S
Sbjct: 550 RADYFAMELLDGHLYLLLDMGSGGIK-LRASSRKVN--DGEWCHVDFQRDGRKGSISVNS 606
Query: 288 MTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+T P L S D + +++GG P
Sbjct: 607 RST--PFLATGDSEILDLESELYLGGLP 632
Score = 72 (30.4 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 26/117 (22%), Positives = 54/117 (46%)
Query: 183 ESGVFFYNSGGYVKGVEQFRVGREME-LKMDVKPRNISGLLLSVHSKK--DYFILQMIDG 239
E+ V Y+ Y+K + + E E + + + GL+++ S++ D L++ G
Sbjct: 729 EATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 788
Query: 240 SVKATVDN-----GKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD 291
+K TV+ G P T + D +WHT+ ++ + ++VD++T +
Sbjct: 789 QMKLTVNLDCLRVGCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVE 845
Score = 72 (30.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E+ L RN GL+L DY L + G+V ++ G G A+ P + F
Sbjct: 313 EITLAFRTLQRN--GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFN- 369
Query: 266 DGQWHTI 272
D WH +
Sbjct: 370 DNAWHDV 376
>UNIPROTKB|F1LS94 [details] [associations]
symbol:Nrxn2 "Neurexin-2-beta" species:10116 "Rattus
norvegicus" [GO:0007269 "neurotransmitter secretion" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027160
PROSITE:PS50026 SMART:SM00181 RGD:620211 GO:GO:0016021
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF307
IPI:IPI00208059 Ensembl:ENSRNOT00000028654 ArrayExpress:F1LS94
Uniprot:F1LS94
Length = 1715
Score = 170 (64.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 47/158 (29%), Positives = 81/158 (51%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S+SS + T+ F KTT+ DG++ + + + D++ + + G IHY F
Sbjct: 927 SRSSYLALATLQAYASMHLFFQF--KTTAP-DGLLLFNSGNGN-DFIVIELVKGYIHYVF 982
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + DK + D +WH V SR + LKID + V + S G+ + L++ G
Sbjct: 983 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQ-HSNGA-RNLDLKG 1040
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GG+ N + + + D F GCL ++ N +L
Sbjct: 1041 ELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRL 1078
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 67/252 (26%), Positives = 103/252 (40%)
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
G GP L +G KL D EWHTV R+ S +L +D V EG+ G+ L F+
Sbjct: 809 GKGPETLFAGHKLN-DNEWHTVRVVRRGKSLQLSVDN-VTVEGQMAGAHTRLE----FH- 861
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L L N + D+ + C G
Sbjct: 862 -NIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCKDGDITYCELNARFGLRAIVA 920
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F + Y+ + + M L K GLLL + + D+ +++++ G +
Sbjct: 921 DPVTFKSRSSYL-ALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKGYIH 979
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTK-NVISVAVDSMTTDKPGLGPPGSS 301
D G GP S + SD D QWH +V + NV ++ +DS T + G+
Sbjct: 980 YVFDLGNGP-SLMKGNSDKPVN-DNQWHNVVVSRDPGNVHTLKIDSRTVTQHS---NGAR 1034
Query: 302 ETDTNNAVFIGG 313
D ++IGG
Sbjct: 1035 NLDLKGELYIGG 1046
Score = 127 (49.8 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 32/134 (23%), Positives = 58/134 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++T + + ++ Y+ D D++ L + DG++ F A D + D
Sbjct: 52 ELSFSLRTNATR-ALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADD 110
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V +R L +DG+ A E + + + + ++GG+P + S L +
Sbjct: 111 RWHMVLLTRDARRTALAVDGEARA-AEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 169
Query: 147 GLNDTFVGCLRNLK 160
F G L NLK
Sbjct: 170 KYEPPFRGLLANLK 183
Score = 127 (49.8 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV------ADV-KH-----IDYVALYVKDGQIHYSFNCG 72
K S+D +TT E +G++ + A V H DY A+ + DG ++ + G
Sbjct: 512 KRTGSISLDFRTT-EPNGLLLFSQGRRAGAGVGSHSSSQRADYFAMELLDGYLYLLLDMG 570
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + L + + + DGEW V+F R G + ++ + + G S+ L++ YLG
Sbjct: 571 SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNSRSTPF-LATGESEVLDLESELYLG 629
Query: 133 GVPLNTSTLVR-----GNLGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDK 181
G+P + L +VGC+R+L +S + + + + + GV P CS +
Sbjct: 630 GLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRE 689
Query: 182 T 182
T
Sbjct: 690 T 690
Score = 80 (33.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 224 SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISV 283
S + DYF ++++DG + +D G G I + S DG+W + + S+
Sbjct: 546 SSSQRADYFAMELLDGYLYLLLDMGSGGIK-LRASSRKVN--DGEWCHVDFQRDGRKGSI 602
Query: 284 AVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+V+S +T P L S D + +++GG P
Sbjct: 603 SVNSRST--PFLATGESEVLDLESELYLGGLP 632
Score = 72 (30.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E+ L RN GL+L DY L + G+V ++ G G A+ P + F
Sbjct: 313 EITLAFRTLQRN--GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFN- 369
Query: 266 DGQWHTI 272
D WH +
Sbjct: 370 DNAWHDV 376
Score = 70 (29.7 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 27/120 (22%), Positives = 56/120 (46%)
Query: 183 ESGVFFYNSGGYVKGVEQFRVGREME-LKMDVKPRNISGLLLSVHSKK--DYFILQMIDG 239
E+ V Y+ Y+K + + E E + + + GL+++ S++ D L++ G
Sbjct: 729 EATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 788
Query: 240 SVKATVDN-----GKGPISAIYTPSDPYF---FCDGQWHTIVAIKTKNVISVAVDSMTTD 291
+K TV+ G P +A P + D +WHT+ ++ + ++VD++T +
Sbjct: 789 QMKLTVNLDCLRVGCAPSAAGKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVE 848
>UNIPROTKB|Q63374 [details] [associations]
symbol:Nrxn2 "Neurexin-2" species:10116 "Rattus norvegicus"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050839 "cell adhesion molecule binding"
evidence=ISS] [GO:0097104 "postsynaptic membrane assembly"
evidence=ISS] [GO:0097116 "gephyrin clustering" evidence=ISS]
[GO:0097118 "neuroligin clustering" evidence=ISS] [GO:0097119
"postsynaptic density protein 95 clustering" evidence=ISS]
InterPro:IPR000742 InterPro:IPR027160 PROSITE:PS50026 SMART:SM00181
RGD:620211 GO:GO:0016021 GO:GO:0046872 GO:GO:0007155
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0050839
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 GO:GO:0097119 GO:GO:0097104
GO:GO:0097116 eggNOG:NOG302266 HOGENOM:HOG000230481
HOVERGEN:HBG052670 KO:K07377 OrthoDB:EOG41G339 GO:GO:0097118
CTD:9379 PANTHER:PTHR10127:SF307 EMBL:M96376 EMBL:AABR03000676
EMBL:AABR03002856 EMBL:AABR03004066 EMBL:AABR03004601
EMBL:AABR03004809 EMBL:AABR03005995 EMBL:AABR03006603
EMBL:AABR03006786 EMBL:AABR03008290 EMBL:AABR03009435
IPI:IPI00208059 IPI:IPI00780694 IPI:IPI00829431 IPI:IPI00829433
IPI:IPI00829458 IPI:IPI00829464 IPI:IPI00829468 IPI:IPI00829489
IPI:IPI00829496 IPI:IPI00829502 PIR:C40228 RefSeq:NP_446298.1
UniGene:Rn.11282 ProteinModelPortal:Q63374 SMR:Q63374 STRING:Q63374
PhosphoSite:Q63374 PRIDE:Q63374 GeneID:116595 KEGG:rno:116595
InParanoid:Q63374 NextBio:619287 ArrayExpress:Q63374
Genevestigator:Q63374 GermOnline:ENSRNOG00000021103 Uniprot:Q63374
Length = 1715
Score = 170 (64.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 47/158 (29%), Positives = 81/158 (51%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S+SS + T+ F KTT+ DG++ + + + D++ + + G IHY F
Sbjct: 927 SRSSYLALATLQAYASMHLFFQF--KTTAP-DGLLLFNSGNGN-DFIVIELVKGYIHYVF 982
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + DK + D +WH V SR + LKID + V + S G+ + L++ G
Sbjct: 983 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQ-HSNGA-RNLDLKG 1040
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GG+ N + + + D F GCL ++ N +L
Sbjct: 1041 ELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRL 1078
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 67/252 (26%), Positives = 103/252 (40%)
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
G GP L +G KL D EWHTV R+ S +L +D V EG+ G+ L F+
Sbjct: 809 GKGPETLFAGHKLN-DNEWHTVRVVRRGKSLQLSVDN-VTVEGQMAGAHTRLE----FH- 861
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L L N + D+ + C G
Sbjct: 862 -NIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCKDGDITYCELNARFGLRAIVA 920
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F + Y+ + + M L K GLLL + + D+ +++++ G +
Sbjct: 921 DPVTFKSRSSYL-ALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKGYIH 979
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTK-NVISVAVDSMTTDKPGLGPPGSS 301
D G GP S + SD D QWH +V + NV ++ +DS T + G+
Sbjct: 980 YVFDLGNGP-SLMKGNSDKPVN-DNQWHNVVVSRDPGNVHTLKIDSRTVTQHS---NGAR 1034
Query: 302 ETDTNNAVFIGG 313
D ++IGG
Sbjct: 1035 NLDLKGELYIGG 1046
Score = 127 (49.8 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 32/134 (23%), Positives = 58/134 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++T + + ++ Y+ D D++ L + DG++ F A D + D
Sbjct: 52 ELSFSLRTNATR-ALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADD 110
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V +R L +DG+ A E + + + + ++GG+P + S L +
Sbjct: 111 RWHMVLLTRDARRTALAVDGEARA-AEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 169
Query: 147 GLNDTFVGCLRNLK 160
F G L NLK
Sbjct: 170 KYEPPFRGLLANLK 183
Score = 127 (49.8 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV------ADV-KH-----IDYVALYVKDGQIHYSFNCG 72
K S+D +TT E +G++ + A V H DY A+ + DG ++ + G
Sbjct: 512 KRTGSISLDFRTT-EPNGLLLFSQGRRAGAGVGSHSSSQRADYFAMELLDGYLYLLLDMG 570
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + L + + + DGEW V+F R G + ++ + + G S+ L++ YLG
Sbjct: 571 SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNSRSTPF-LATGESEVLDLESELYLG 629
Query: 133 GVPLNTSTLVR-----GNLGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDK 181
G+P + L +VGC+R+L +S + + + + + GV P CS +
Sbjct: 630 GLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRE 689
Query: 182 T 182
T
Sbjct: 690 T 690
Score = 80 (33.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 224 SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISV 283
S + DYF ++++DG + +D G G I + S DG+W + + S+
Sbjct: 546 SSSQRADYFAMELLDGYLYLLLDMGSGGIK-LRASSRKVN--DGEWCHVDFQRDGRKGSI 602
Query: 284 AVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+V+S +T P L S D + +++GG P
Sbjct: 603 SVNSRST--PFLATGESEVLDLESELYLGGLP 632
Score = 72 (30.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E+ L RN GL+L DY L + G+V ++ G G A+ P + F
Sbjct: 313 EITLAFRTLQRN--GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFN- 369
Query: 266 DGQWHTI 272
D WH +
Sbjct: 370 DNAWHDV 376
Score = 70 (29.7 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 27/120 (22%), Positives = 56/120 (46%)
Query: 183 ESGVFFYNSGGYVKGVEQFRVGREME-LKMDVKPRNISGLLLSVHSKK--DYFILQMIDG 239
E+ V Y+ Y+K + + E E + + + GL+++ S++ D L++ G
Sbjct: 729 EATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 788
Query: 240 SVKATVDN-----GKGPISAIYTPSDPYF---FCDGQWHTIVAIKTKNVISVAVDSMTTD 291
+K TV+ G P +A P + D +WHT+ ++ + ++VD++T +
Sbjct: 789 QMKLTVNLDCLRVGCAPSAAGKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVE 848
>MGI|MGI:105382 [details] [associations]
symbol:Lama5 "laminin, alpha 5" species:10090 "Mus musculus"
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IMP] [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005178 "integrin
binding" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
[GO:0005604 "basement membrane" evidence=ISO;IDA] [GO:0005605
"basal lamina" evidence=IDA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=ISO] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030155 "regulation
of cell adhesion" evidence=IEA] [GO:0030324 "lung development"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043259 "laminin-10 complex"
evidence=ISO;IPI] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IMP] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:105382 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0005178 PROSITE:PS01186 GO:GO:0007229 GO:GO:0042475
EMBL:AL663027 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738 GO:GO:0034446
GO:GO:0090002 GO:GO:0016331 GO:GO:0001658 GO:GO:0060445
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OMA:LRHTTGP OrthoDB:EOG4VHK5G ChiTaRS:LAMA5 GO:GO:0043259
EMBL:AJ293593 EMBL:U37501 IPI:IPI00116913 PIR:T10053
RefSeq:NP_001074640.1 UniGene:Mm.4339 PDB:2Y38 PDBsum:2Y38
ProteinModelPortal:Q61001 SMR:Q61001 STRING:Q61001
PhosphoSite:Q61001 PaxDb:Q61001 PRIDE:Q61001
Ensembl:ENSMUST00000015791 GeneID:16776 KEGG:mmu:16776
InParanoid:A2ABW7 EvolutionaryTrace:Q61001 NextBio:290620
Bgee:Q61001 CleanEx:MM_LAMA5 Genevestigator:Q61001
GermOnline:ENSMUSG00000015647 Uniprot:Q61001
Length = 3718
Score = 173 (66.0 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 68/297 (22%), Positives = 132/297 (44%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVK-HIDYVALYVKDGQIHYSFNC 71
S +++ I+ +N+ S+ ++ + G++ A + + L++ G H+
Sbjct: 3346 SYLQFVGISPSHRNRLHLSMLVRPHAASQGLLLSTAPMSGRSPSLVLFLNHG--HFVAQT 3403
Query: 72 -GSGPMALSSGDKLILDGEWH--TVEFSRQQLSGKLKIDG-QVVAEGESKGSSKTLNIFG 127
G GP + G+WH +V + QQ+ +L +DG Q ++
Sbjct: 3404 EGPGPRLQVQSRQHSRAGQWHRVSVRWGMQQI--QLVVDGSQTWSQKALHHRVPRAERPQ 3461
Query: 128 PFYL--GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPC-SDKTES 184
P+ L GG+P ++ + L ++ F GCL+ L+ + + ++ GV PC S E
Sbjct: 3462 PYTLSVGGLPASSYS---SKLPVSVGFSGCLKKLQLDKRPLRTPTQMVGVTPCVSGPLED 3518
Query: 185 GVFFYNSGGYVKGVEQFRVGRE-MELKMDVKPRNISGLLLSVHSK--KDYFILQMIDGSV 241
G+FF S G V +E + + L+++++P +GL+ + Y L+++ V
Sbjct: 3519 GLFFPGSEGVVT-LELPKAKMPYVSLELEMRPLAAAGLIFHLGQALATPYMQLKVLTEQV 3577
Query: 242 KATVDNGKGPISAIYT-PSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGP 297
++G G S T P CDG+WH + I ++ + + VD+ + G P
Sbjct: 3578 LLQANDGAGEFSTWVTYPK----LCDGRWHRVAVIMGRDTLRLEVDTQSNHTTGRLP 3630
>FB|FBgn0261574 [details] [associations]
symbol:kug "kugelei" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0016339
"calcium-dependent cell-cell adhesion" evidence=ISS] [GO:0050839
"cell adhesion molecule binding" evidence=ISS] [GO:0004872
"receptor activity" evidence=ISS] [GO:0007156 "homophilic cell
adhesion" evidence=IEA;ISS] [GO:0005887 "integral to plasma
membrane" evidence=ISS] [GO:0045571 "negative regulation of
imaginal disc growth" evidence=TAS] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0007431 "salivary gland development"
evidence=IMP] [GO:0007440 "foregut morphogenesis" evidence=IMP]
[GO:0007442 "hindgut morphogenesis" evidence=IMP] [GO:0005925
"focal adhesion" evidence=IDA] [GO:0042247 "establishment of planar
polarity of follicular epithelium" evidence=IMP] [GO:0009925 "basal
plasma membrane" evidence=IDA] [GO:0030950 "establishment or
maintenance of actin cytoskeleton polarity" evidence=IMP]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR018097 InterPro:IPR020894
Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE014296
GO:GO:0005887 GO:GO:0005509 GO:GO:0004872 GO:GO:0005925
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007431
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 GO:GO:0050839
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0016339 GO:GO:0007156 GO:GO:0009925 GO:GO:0030950
SUPFAM:SSF49313 GO:GO:0007424 Gene3D:2.60.40.60 Pfam:PF02210
KO:K16506 GO:GO:0007295 GO:GO:0007440 GO:GO:0007442 GO:GO:0045571
EMBL:AY060955 EMBL:AY118666 RefSeq:NP_001027138.1
RefSeq:NP_649171.2 UniGene:Dm.3778 ProteinModelPortal:Q9VW71
SMR:Q9VW71 DIP:DIP-24050N IntAct:Q9VW71 MINT:MINT-931063
STRING:Q9VW71 PaxDb:Q9VW71 PRIDE:Q9VW71 GeneID:40191
KEGG:dme:Dmel_CG7749 UCSC:CG7749-RA CTD:40191 FlyBase:FBgn0261574
InParanoid:Q9VW71 OMA:RYGQNVH OrthoDB:EOG4MSBCX PhylomeDB:Q9VW71
GenomeRNAi:40191 NextBio:817494 Bgee:Q9VW71 GermOnline:CG7749
GO:GO:0042247 Uniprot:Q9VW71
Length = 4705
Score = 183 (69.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 41/136 (30%), Positives = 67/136 (49%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84
+N F +S+ I+T +Q G + Y + +DY L + +G + Y F+ GSG +S
Sbjct: 3960 ENGFSYSLQIRTV-QQTGTLLYASG--KVDYNILEIINGAVQYRFDLGSGEGVISVSSIN 4016
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
I DGEWH + R S K+ +D + V+ G + G + LNI G + + G
Sbjct: 4017 ISDGEWHQISLERSLNSAKVMVDNKHVSHGSAPGVNGILNIQSNDIFVGAEVRPHPSIIG 4076
Query: 145 NLGLNDTFVGCLRNLK 160
+ F+GC+ N+K
Sbjct: 4077 YEDIQRGFIGCMANIK 4092
Score = 41 (19.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 9 TSKSSRIEYPTITGRFKNKF 28
+ ++ RI Y +G+ KNKF
Sbjct: 1325 SGENGRITYSIKSGKGKNKF 1344
>FB|FBgn0013997 [details] [associations]
symbol:Nrx-IV "Neurexin IV" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0008104 "protein localization" evidence=TAS] [GO:0007391
"dorsal closure" evidence=IMP;NAS;TAS] [GO:0005918 "septate
junction" evidence=NAS;TAS] [GO:0016080 "synaptic vesicle
targeting" evidence=NAS] [GO:0016081 "synaptic vesicle docking
involved in exocytosis" evidence=NAS] [GO:0004888 "transmembrane
signaling receptor activity" evidence=ISS] [GO:0008065
"establishment of blood-nerve barrier" evidence=NAS] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0019991 "septate junction
assembly" evidence=IMP;NAS] [GO:0005887 "integral to plasma
membrane" evidence=NAS] [GO:0045216 "cell-cell junction
organization" evidence=TAS] [GO:0007163 "establishment or
maintenance of cell polarity" evidence=NAS] [GO:0035151 "regulation
of tube size, open tracheal system" evidence=IMP] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005919 "pleated septate junction"
evidence=IDA] [GO:0060857 "establishment of glial blood-brain
barrier" evidence=IMP] [GO:0021682 "nerve maturation" evidence=IMP]
[GO:0008366 "axon ensheathment" evidence=IMP] [GO:0008039 "synaptic
target recognition" evidence=IMP] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
GO:GO:0008104 EMBL:AE014296 GO:GO:0005887 GO:GO:0007391
GO:GO:0060857 GO:GO:0007163 GO:GO:0035151 GO:GO:0019991
GO:GO:0007155 GO:GO:0048786 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0016081
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0008366
eggNOG:NOG291100 GO:GO:0021682 GO:GO:0016080 GO:GO:0072553
GO:GO:0097105 GeneTree:ENSGT00560000076996 GO:GO:0005919
EMBL:X86685 PIR:T13799 RefSeq:NP_524034.2 UniGene:Dm.1843
ProteinModelPortal:Q94887 SMR:Q94887 STRING:Q94887 PaxDb:Q94887
PRIDE:Q94887 EnsemblMetazoa:FBtr0075998 GeneID:39387
KEGG:dme:Dmel_CG6827 CTD:39387 FlyBase:FBgn0013997
InParanoid:Q94887 OrthoDB:EOG40RXWG PhylomeDB:Q94887
GenomeRNAi:39387 NextBio:813387 Bgee:Q94887 GermOnline:CG6827
Uniprot:Q94887
Length = 1284
Score = 168 (64.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 70/273 (25%), Positives = 117/273 (42%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFS 96
T+ +G++ Y + DY AL +KD ++ + + GS M S L+ D WH V S
Sbjct: 222 TAFANGVMMYSRGTQG-DYYALQLKDNKMVLNLDLGSRVMTSLSVGSLLDDNVWHDVVIS 280
Query: 97 RQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCL 156
R Q +D +V+ G +G LN+ YLGGVP N V+ L + F GCL
Sbjct: 281 RNQRDIIFSVD-RVIVRGRIQGEFTRLNLNRELYLGGVP-N----VQEGLIVQQNFSGCL 334
Query: 157 RNLKSNN----KLVQDKHTSSG----------VIPCSDKTESGVFFYNSGGYVKGVEQFR 202
N+ N+ ++++D T G + C V F +V+ ++ +
Sbjct: 335 ENIYFNSTNFIRVMKDS-TELGEGYLFTRVNTIYACPSPPIYPVTFTTRSSFVR-LKGYE 392
Query: 203 VGREMELKMDVKPRNISGLLLSVHSKKDYFILQMID-GSVKATVDNGKGPISAIYTPSDP 261
+ + + + +G++L ++ ++ G VK + K I D
Sbjct: 393 NSQRLNVSFYFRTYEETGVMLHHDFYSGGYLKVFLEFGKVKIDL-KVKDKARIILDNYDD 451
Query: 262 YFFCDGQWHTIVAIKTKNVISVAVDS--MTTDK 292
F DG+WH+ V KN + + +D MTT K
Sbjct: 452 QFN-DGKWHSFVISIEKNRLILNIDQRPMTTTK 483
Score = 158 (60.7 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 57/225 (25%), Positives = 99/225 (44%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG-QIHYSFNCGSGPMALSSGDKLIL- 86
D ++ +TT E + +IF+ DY+ L + G ++ + + GSGP+ ++ G L
Sbjct: 819 DIYLEFRTTQE-NSVIFHATGPT--DYIKLSLNGGNKLQFQYQAGSGPLGVNVGTSYHLN 875
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAE-GESKGSSKTLNIFGPFYLGGVPLNTSTLVRGN 145
D WHTV R + +L +DG + AE E G + L++ +G +T R
Sbjct: 876 DNNWHTVSVERNRKEARLVVDGSIKAEVREPPGPVRALHLTSDLVIGA-----TTEYR-- 928
Query: 146 LGLNDTFVGCLRNLKSNNKLVQDKHTSS----GVIP-CSDKTESGVFFYNSGGYVKGVEQ 200
D +VGC+R L N K+V K S G+ C + ES N+G ++ +
Sbjct: 929 ----DGYVGCIRALLLNGKMVDLKEYSKRGLYGISTGCVGRCESNPCL-NNGTCIERYD- 982
Query: 201 FRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATV 245
G + + I + V+ + I +GS ++T+
Sbjct: 983 ---GYSCDCRWSAFKGPICADEIGVNLRSSSIIRYEFEGSFRSTI 1024
>UNIPROTKB|F1RQP6 [details] [associations]
symbol:NRXN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007416 "synapse assembly" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0005246 "calcium
channel regulator activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027160
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0007269
GO:GO:0005246 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 OMA:GGDCDFL PANTHER:PTHR10127:SF307
EMBL:CU468547 EMBL:FP101995 Ensembl:ENSSSCT00000014237
Uniprot:F1RQP6
Length = 1696
Score = 169 (64.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S+SS + T+ F KTT+ DG++ + + + D++ + + G IHY F
Sbjct: 915 SRSSYLALATLQAYASMHLFFQF--KTTAP-DGLLLFNSGNGN-DFIVIELVKGYIHYVF 970
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + DK + D +WH V SR + LKID + V + S G+ + L++ G
Sbjct: 971 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQ-HSNGA-RNLDLKG 1028
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GG+ N + + D F GCL ++ N +L
Sbjct: 1029 ELYIGGLSKNMFNNLPKLVASRDGFQGCLASVDLNGRL 1066
Score = 160 (61.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 73/291 (25%), Positives = 116/291 (39%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFN--C-------GSGPMALSSGDKLILDGEWHT 92
G++ + D + L + GQ+ + N C GP L +G KL D EWHT
Sbjct: 758 GLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLN-DNEWHT 816
Query: 93 VEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
V R+ S +L +D V EG+ G+ L F+ + T R + F
Sbjct: 817 VRVVRRGKSLQLSVDN-VTVEGQMAGAHTRLE----FH--NIETGIMTERRFISVVPSNF 869
Query: 153 VGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRVG 204
+G L L N + D+ + C G V F + Y+ + +
Sbjct: 870 IGHLSGLVFNGQPYMDQCKDGDITYCELNARFGLRAIVADPVTFKSRSSYL-ALATLQAY 928
Query: 205 REMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYF 263
M L K GLLL + + D+ +++++ G + D G GP S + SD
Sbjct: 929 ASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKGYIHYVFDLGNGP-SLMKGNSDKPV 987
Query: 264 FCDGQWHTIVAIKTK-NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
D QWH +V + NV ++ +DS T + G+ D ++IGG
Sbjct: 988 N-DNQWHNVVVSRDPGNVHTLKIDSRTVTQHS---NGARNLDLKGELYIGG 1034
Score = 127 (49.8 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 32/134 (23%), Positives = 58/134 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++T + + ++ Y+ D D++ L + DG++ F A D + D
Sbjct: 50 ELSFSLRTNATR-ALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADD 108
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V +R L +DG+ A E + + + + ++GG+P + S L +
Sbjct: 109 RWHMVLLTRDARRTALAVDGEARA-AEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 167
Query: 147 GLNDTFVGCLRNLK 160
F G L NLK
Sbjct: 168 KYEPPFRGLLANLK 181
Score = 126 (49.4 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 45/181 (24%), Positives = 83/181 (45%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV------------ADVKHIDYVALYVKDGQIHYSFNCG 72
K S+D +TT E +G++ + + + DY A+ + DG ++ + G
Sbjct: 503 KRTGSISLDFRTT-EPNGLLLFSQGRRAGAGASSHSTAQRADYFAMELLDGYLYLLLDMG 561
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + L + + + DGEW V+F R G + ++ + + G S+ L++ YLG
Sbjct: 562 SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNSRSTPF-LATGESEILDLESELYLG 620
Query: 133 GVPLNTSTLVR-----GNLGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDK 181
G+P + L +VGC+R+L +S + + + + + GV P CS +
Sbjct: 621 GLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRE 680
Query: 182 T 182
T
Sbjct: 681 T 681
Score = 114 (45.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 44/151 (29%), Positives = 74/151 (49%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLILDGEWHTVE 94
T +++G++ + K DYV L +K G + N GSG AL + D WH V
Sbjct: 318 TLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVR 375
Query: 95 FSR--QQLSG------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNL 146
+R +Q +G + +DG + G ++ L FY+GG P NT+ L G+
Sbjct: 376 VTRNLRQHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSP-NTADLP-GS- 432
Query: 147 GLNDTFVGCLRNL--KSNN-KLVQDKHTSSG 174
+++ F+GCL+++ K+N+ KL + G
Sbjct: 433 PVSNNFMGCLKDVVYKNNDFKLELSRLAKEG 463
Score = 80 (33.2 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 224 SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISV 283
S + DYF ++++DG + +D G G I + S DG+W + + S+
Sbjct: 537 STAQRADYFAMELLDGYLYLLLDMGSGGIK-LRASSRKVN--DGEWCHVDFQRDGRKGSI 593
Query: 284 AVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+V+S +T P L S D + +++GG P
Sbjct: 594 SVNSRST--PFLATGESEILDLESELYLGGLP 623
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/118 (23%), Positives = 49/118 (41%)
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E+ L RN GL+L DY L + G+V ++ G G A+ P + F
Sbjct: 311 EITLAFRTLQRN--GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFN- 367
Query: 266 DGQWHTIVAIKTKN--------VISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
D WH + + +++++VD + T G + +++ +IGG P
Sbjct: 368 DNAWHDVRVTRNLRQHAGIGHAMVTISVDGILTTT-GYTQEDYTMLGSDDFFYIGGSP 424
Score = 72 (30.4 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 26/117 (22%), Positives = 54/117 (46%)
Query: 183 ESGVFFYNSGGYVKGVEQFRVGREME-LKMDVKPRNISGLLLSVHSKK--DYFILQMIDG 239
E+ V Y+ Y+K + + E E + + + GL+++ S++ D L++ G
Sbjct: 720 EATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGLMMATTSRESADTLRLELDGG 779
Query: 240 SVKATVDN-----GKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTD 291
+K TV+ G P T + D +WHT+ ++ + ++VD++T +
Sbjct: 780 QMKLTVNLDCLRVGCAPSKGPETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVE 836
>UNIPROTKB|E1BFN9 [details] [associations]
symbol:NRXN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007416 "synapse assembly" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0005246 "calcium
channel regulator activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027160
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0007269
GO:GO:0005246 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 KO:K07377 CTD:9379 OMA:GGDCDFL
PANTHER:PTHR10127:SF307 EMBL:DAAA02063538 EMBL:DAAA02063536
EMBL:DAAA02063537 IPI:IPI00690334 RefSeq:NP_001179851.1
UniGene:Bt.9366 ProteinModelPortal:E1BFN9
Ensembl:ENSBTAT00000000307 GeneID:537808 KEGG:bta:537808
NextBio:20877219 Uniprot:E1BFN9
Length = 1710
Score = 169 (64.5 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 47/158 (29%), Positives = 80/158 (50%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S+SS + T+ F KTT+ DG++ + + + D++ + + G IHY F
Sbjct: 922 SRSSYLALATLQAYASMHLFFQF--KTTAP-DGLLLFNSGNGN-DFIVIELVKGYIHYVF 977
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + DK + D +WH V SR + LKID + V + S G+ + L++ G
Sbjct: 978 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDSRTVTQ-HSNGA-RNLDLKG 1035
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GG+ N + + D F GCL ++ N +L
Sbjct: 1036 ELYIGGLSKNMFNNLPKLVASRDGFQGCLASVDLNGRL 1073
Score = 160 (61.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 73/291 (25%), Positives = 116/291 (39%)
Query: 42 GIIFYVADVKHIDYVALYVKDGQIHYSFN--C-------GSGPMALSSGDKLILDGEWHT 92
G++ + D + L + GQ+ + N C GP L +G KL D EWHT
Sbjct: 765 GLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLN-DNEWHT 823
Query: 93 VEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
V R+ S +L +D V EG+ G+ L F+ + T R + F
Sbjct: 824 VRVVRRGKSLQLSVDN-VTVEGQMAGAHTRLE----FH--NIETGIMTERRFISVVPSNF 876
Query: 153 VGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG--------VFFYNSGGYVKGVEQFRVG 204
+G L L N + D+ + C G V F + Y+ + +
Sbjct: 877 IGHLSGLVFNGQPYMDQCKDGDITYCELNARFGLRAIVADPVTFKSRSSYL-ALATLQAY 935
Query: 205 REMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYF 263
M L K GLLL + + D+ +++++ G + D G GP S + SD
Sbjct: 936 ASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKGYIHYVFDLGNGP-SLMKGNSDKPV 994
Query: 264 FCDGQWHTIVAIKTK-NVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
D QWH +V + NV ++ +DS T + G+ D ++IGG
Sbjct: 995 N-DNQWHNVVVSRDPGNVHTLKIDSRTVTQHS---NGARNLDLKGELYIGG 1041
Score = 127 (49.8 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 32/134 (23%), Positives = 58/134 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++T + + ++ Y+ D D++ L + DG++ F A D + D
Sbjct: 50 ELSFSLRTNATR-ALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVADD 108
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V +R L +DG+ A E + + + + ++GG+P + S L +
Sbjct: 109 RWHMVLLTRDARRTALAVDGEARA-AEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 167
Query: 147 GLNDTFVGCLRNLK 160
F G L NLK
Sbjct: 168 KYEPPFRGLLANLK 181
Score = 125 (49.1 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 38/140 (27%), Positives = 68/140 (48%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAE 113
DY A+ + DG ++ + GSG + L + + + DGEW V+F R G + ++ +
Sbjct: 550 DYFAMELLDGYLYLLLDMGSGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNSRSTPF 609
Query: 114 GESKGSSKTLNIFGPFYLGGVPLNTSTLVR-----GNLGLNDTFVGCLRNL----KSNN- 163
+ G S+ L++ YLGG+P + L +VGC+R+L +S +
Sbjct: 610 -LATGESEILDLESELYLGGLPEGGRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDL 668
Query: 164 KLVQDKHTSSGVIP-CSDKT 182
+ + + + GV P CS +T
Sbjct: 669 RGLAEAQGAVGVAPFCSRET 688
Score = 80 (33.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 224 SVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISV 283
S + DYF ++++DG + +D G G I + S DG+W + + S+
Sbjct: 544 STAQRADYFAMELLDGYLYLLLDMGSGGIK-LRASSRKVN--DGEWCHVDFQRDGRKGSI 600
Query: 284 AVDSMTTDKPGLGPPGSSETDTNNAVFIGGHP 315
+V+S +T P L S D + +++GG P
Sbjct: 601 SVNSRST--PFLATGESEILDLESELYLGGLP 630
Score = 73 (30.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 30/137 (21%), Positives = 62/137 (45%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREME-LKMDVKPRNISGL 221
N+ V D +G + + E+ V Y+ Y+K + + E E + + + GL
Sbjct: 708 NRFVCDC-VGTGFLGRVCEREATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGL 766
Query: 222 LLSVHSKK--DYFILQMIDGSVKATVDN-----GKGPISAIYTPSDPYFFCDGQWHTIVA 274
+++ S++ D L++ G +K TV+ G P T + D +WHT+
Sbjct: 767 MMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLNDNEWHTVRV 826
Query: 275 IKTKNVISVAVDSMTTD 291
++ + ++VD++T +
Sbjct: 827 VRRGKSLQLSVDNVTVE 843
Score = 72 (30.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 206 EMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFC 265
E+ L RN GL+L DY L + G+V ++ G G A+ P + F
Sbjct: 311 EITLAFRTLQRN--GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFN- 367
Query: 266 DGQWHTI 272
D WH +
Sbjct: 368 DNAWHDV 374
>MGI|MGI:1096391 [details] [associations]
symbol:Nrxn1 "neurexin I" species:10090 "Mus musculus"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005246 "calcium channel regulator
activity" evidence=IGI] [GO:0005509 "calcium ion binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005623 "cell" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=IC;ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=IDA]
[GO:0007158 "neuron cell-cell adhesion" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=IGI] [GO:0007269 "neurotransmitter
secretion" evidence=IGI;TAS] [GO:0007416 "synapse assembly"
evidence=IGI] [GO:0007612 "learning" evidence=IMP] [GO:0009986
"cell surface" evidence=ISO;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016339 "calcium-dependent cell-cell adhesion" evidence=IDA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030139 "endocytic
vesicle" evidence=ISO] [GO:0030534 "adult behavior" evidence=IMP]
[GO:0033130 "acetylcholine receptor binding" evidence=IDA]
[GO:0035176 "social behavior" evidence=ISO] [GO:0035418 "protein
localization to synapse" evidence=IDA] [GO:0042734 "presynaptic
membrane" evidence=IDA] [GO:0043473 "pigmentation" evidence=ISO]
[GO:0043499 "eukaryotic cell surface binding" evidence=IDA]
[GO:0044295 "axonal growth cone" evidence=IDA] [GO:0045184
"establishment of protein localization" evidence=IDA] [GO:0045202
"synapse" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050839 "cell adhesion molecule binding"
evidence=ISO;IPI] [GO:0050885 "neuromuscular process controlling
balance" evidence=IMP] [GO:0051290 "protein heterotetramerization"
evidence=ISO] [GO:0051490 "negative regulation of filopodium
assembly" evidence=IDA] [GO:0051965 "positive regulation of synapse
assembly" evidence=IGI] [GO:0051968 "positive regulation of
synaptic transmission, glutamatergic" evidence=IDA;IMP] [GO:0060076
"excitatory synapse" evidence=IC] [GO:0060077 "inhibitory synapse"
evidence=IC] [GO:0060134 "prepulse inhibition" evidence=IMP]
[GO:0060325 "face morphogenesis" evidence=ISO] [GO:0071625
"vocalization behavior" evidence=ISO] [GO:0090004 "positive
regulation of establishment of protein localization to plasma
membrane" evidence=IDA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IDA] [GO:0097091 "synaptic vesicle clustering"
evidence=IDA] [GO:0097104 "postsynaptic membrane assembly"
evidence=IDA] [GO:0097105 "presynaptic membrane assembly"
evidence=IDA] [GO:0097109 "neuroligin family protein binding"
evidence=ISO;IPI] [GO:0097112 "gamma-aminobutyric acid receptor
clustering" evidence=IDA] [GO:0097114 "N-methyl-D-aspartate
receptor clustering" evidence=IDA] [GO:0097116 "gephyrin
clustering" evidence=IDA] [GO:0097117 "guanylate kinase-associated
protein clustering" evidence=IDA] [GO:0097118 "neuroligin
clustering" evidence=IDA] [GO:0097119 "postsynaptic density protein
95 clustering" evidence=IDA] [GO:0097120 "receptor localization to
synapse" evidence=IDA] [GO:2000310 "regulation of
N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IDA] [GO:2000311 "regulation of
alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:2000463 "positive
regulation of excitatory postsynaptic membrane potential"
evidence=IDA;IMP] [GO:2000821 "regulation of grooming behavior"
evidence=IMP] InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026
SMART:SM00181 InterPro:IPR000152 MGI:MGI:1096391 GO:GO:0016021
GO:GO:0005886 GO:GO:0009986 GO:GO:0046872 GO:GO:0030054
GO:GO:0007612 GO:GO:0050885 GO:GO:0007155 GO:GO:0042734
GO:GO:0051968 GO:GO:0060134 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0030534 GO:GO:0051965 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0090129
GO:GO:0007269 GO:GO:0005246 Pfam:PF02210 InterPro:IPR003585
SMART:SM00294 GO:GO:2000463 GO:GO:2000821 GO:GO:0097119
GO:GO:0097104 GO:GO:0097116 eggNOG:NOG302266
GeneTree:ENSGT00560000076996 HOGENOM:HOG000230481
HOVERGEN:HBG052670 KO:K07377 OMA:NAYACEC OrthoDB:EOG41G339
PANTHER:PTHR10127:SF309 CTD:9378 ChiTaRS:NRXN1 GO:GO:0097118
EMBL:AB093249 EMBL:AC101872 EMBL:AC131326 EMBL:AC151286
EMBL:AC154325 EMBL:AC154599 EMBL:AC167814 EMBL:AC170901
EMBL:AC171209 EMBL:CT025708 EMBL:CT486002 EMBL:BC047146
EMBL:AF387674 EMBL:AK017578 EMBL:AJ006802 IPI:IPI00230050
IPI:IPI00230051 IPI:IPI00468539 IPI:IPI00970455 RefSeq:NP_064648.3
RefSeq:NP_796258.2 UniGene:Mm.312068 PDB:3BOD PDB:3MW2 PDBsum:3BOD
PDBsum:3MW2 ProteinModelPortal:Q9CS84 SMR:Q9CS84 IntAct:Q9CS84
STRING:Q9CS84 PhosphoSite:Q9CS84 PaxDb:Q9CS84 PRIDE:Q9CS84
Ensembl:ENSMUST00000054059 Ensembl:ENSMUST00000160844
Ensembl:ENSMUST00000161402 Ensembl:ENSMUST00000174331 GeneID:18189
KEGG:mmu:18189 UCSC:uc008dvz.2 UCSC:uc008dwa.2 UCSC:uc012ayq.1
InParanoid:Q9CS84 EvolutionaryTrace:Q9CS84 NextBio:293528
Bgee:Q9CS84 CleanEx:MM_NRXN1 Genevestigator:Q9CS84
GermOnline:ENSMUSG00000024109 GO:GO:0033130 Uniprot:Q9CS84
Length = 1514
Score = 168 (64.2 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 506 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 564
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 565 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 623
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 624 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSKET 683
Score = 160 (61.4 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 745 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 798
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 799 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 852
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 853 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 911
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 912 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 970
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 971 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 1025
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 1026 NLDLKSDLYIGG 1037
Score = 148 (57.2 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 918 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 973
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 974 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1031
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 1032 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 1086
Score = 130 (50.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 43/170 (25%), Positives = 75/170 (44%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDGQIHYSFNCGSGPMALSSGDKLILD 87
+ S +KT S + G++ Y D D++ L + + G++ SF+ A D + D
Sbjct: 53 EMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVND 111
Query: 88 GEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTL--VR 143
G WH+V RQ + L ID E K + + +F ++GG+P L + L
Sbjct: 112 GAWHSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTL 171
Query: 144 GNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGG 193
++ + F G +R+++ N+ Q G + D+ NSGG
Sbjct: 172 ASVREREPFKGWIRDVRVNSS--QALPVDGGEVKLDDEPP------NSGG 213
Score = 84 (34.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 530 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 586
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+++ T PG SE D ++ +++GG P
Sbjct: 587 FQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 626
Score = 80 (33.2 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 307 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 365
Query: 268 QWHTIVAIKTKNV 280
WH + T+N+
Sbjct: 366 AWHDVKV--TRNL 376
Score = 39 (18.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 270 HTIVAIKTKNVISVAVDSMTTDKP 293
H +VA K +NV ++ D +T + P
Sbjct: 473 HGVVAFKCENVATL--DPITFETP 494
>UNIPROTKB|J9NWK2 [details] [associations]
symbol:NRXN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR000742
InterPro:IPR027149 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 GeneTree:ENSGT00560000076996
PANTHER:PTHR10127:SF405 EMBL:AAEX03005887
Ensembl:ENSCAFT00000043139 OMA:FHWDLGQ Uniprot:J9NWK2
Length = 731
Score = 162 (62.1 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 49/172 (28%), Positives = 82/172 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS I+F D D++A+ + G IHY F
Sbjct: 504 TKSSYLSLATLQAYTSMHLFFQF--KTTSADGFILFNSGDGN--DFIAVELVKGYIHYVF 559
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSG-KLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP + + D+ + D +WH V +R + LK+D +VV + + +K L++ G
Sbjct: 560 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVIN--GAKNLDLKG 617
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL---VQDKHTSSGVI 176
Y+ G+ + + + D F GCL ++ N +L + D SG I
Sbjct: 618 DLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQI 669
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 76/287 (26%), Positives = 115/287 (40%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF ++ + + + TTS AD ++ V L V I + N
Sbjct: 332 EAEDVSFRFMSQRAYGLLVATTSRDS------ADTLRLELDGGRVKLMVNLDCIRINCNS 385
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G KL D EWHTV R+ S KL +D V AEG G L F+
Sbjct: 386 SKGPETLYAGQKLN-DNEWHTVRVVRRGKSLKLTVDDDV-AEGTMVGDHTRLE----FH- 438
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + +F+G L++L N L D + + C K G
Sbjct: 439 -NIETGIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIA 497
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F Y+ + + M L K + G +L + D+ ++++ G +
Sbjct: 498 DPVTFKTKSSYLS-LATLQAYTSMHLFFQFKTTSADGFILFNSGDGNDFIAVELVKGYIH 556
Query: 243 ATVDNGKGPISAIYTPSD-PYFFCDGQWHTIVAIK-TKNVISVAVDS 287
D G GP + I SD P D QWH +V + N S+ VD+
Sbjct: 557 YVFDLGNGP-NVIKGNSDRP--LNDNQWHNVVITRDNSNTHSLKVDT 600
Score = 154 (59.3 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 50/177 (28%), Positives = 86/177 (48%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D + +D+ A+ + DG ++ + G
Sbjct: 93 KRMGSISFDFRTT-EPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMG 151
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K DGEW+ V+ R SG + ++ + S G S+ L++ G YLG
Sbjct: 152 SGTIKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTAS-GESEILDLEGDMYLG 210
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGV-IPCS 179
G+P N + L+ LN +VGC+R+L +S N + + + ++GV CS
Sbjct: 211 GLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCS 267
Score = 54 (24.1 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 40/185 (21%), Positives = 75/185 (40%)
Query: 163 NKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNIS--- 219
N+ + D T +G + + E+ + Y+ Y+K + + E E DV R +S
Sbjct: 290 NRFICDC-TGTGHWGRTCEREASILSYDGSMYMKIIMPMVMHTEAE---DVSFRFMSQRA 345
Query: 220 -GLLLSVHSKK--DYFILQMIDGSVKATV--DNGKGPISAIYTPSDPYF---FCDGQWHT 271
GLL++ S+ D L++ G VK V D + ++ P Y D +WHT
Sbjct: 346 YGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHT 405
Query: 272 IVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGPRTKRR 331
+ ++ + + VD D +G H L + ++G T++R
Sbjct: 406 VRVVRRGKSLKLTVDD----------------DVAEGTMVGDHTRLEFHNIETGIMTEKR 449
Query: 332 SVFLI 336
+ ++
Sbjct: 450 YISVV 454
>UNIPROTKB|F1NFR0 [details] [associations]
symbol:NRXN1 "Neurexin-1" species:9031 "Gallus gallus"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0033130 "acetylcholine receptor
binding" evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0050839 "cell
adhesion molecule binding" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0051965 "positive
regulation of synapse assembly" evidence=IEA] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0071625
"vocalization behavior" evidence=IEA] [GO:0090129 "positive
regulation of synapse maturation" evidence=IEA] [GO:0097104
"postsynaptic membrane assembly" evidence=IEA] [GO:0097109
"neuroligin family protein binding" evidence=IEA] [GO:0097116
"gephyrin clustering" evidence=IEA] [GO:0097118 "neuroligin
clustering" evidence=IEA] [GO:0097119 "postsynaptic density protein
95 clustering" evidence=IEA] [GO:2000463 "positive regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:2000821 "regulation of grooming behavior" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0009986 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309
IPI:IPI00812400 OMA:GRSCERX EMBL:AADN02036293 EMBL:AADN02036298
EMBL:AADN02036299 EMBL:AADN02036300 EMBL:AADN02036301
EMBL:AADN02036302 EMBL:AADN02036303 EMBL:AC157664 EMBL:AC157952
Ensembl:ENSGALT00000014832 ArrayExpress:F1NFR0 Uniprot:F1NFR0
Length = 1357
Score = 167 (63.8 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 349 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLLDMG 407
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 408 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDDLYLG 466
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 467 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRET 526
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 75/312 (24%), Positives = 125/312 (40%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS + AD ++ V L V I + N
Sbjct: 588 EAEDVSLRFRSQRAYGILMATTSRES------ADTLRLELDAGRVKLTVNLDCIRINCNS 641
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 642 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLMVDDQQAMTGQMAGDHTRLE----FH- 695
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 696 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 754
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 755 DPVTFKTKASYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 813
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 814 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTNNLHTVKIDTKITTQ---STAGAR 868
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 869 NLDLKSDLYIGG 880
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTV 93
KTTS DG+I Y + + D++ + + G +HY F+ G+G + S +K + D +WH V
Sbjct: 784 KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNV 841
Query: 94 EFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
SR + +KID ++ + S ++ L++ Y+GGV + + + F
Sbjct: 842 MISRDTNNLHTVKIDTKITTQ--STAGARNLDLKSDLYIGGVAKEMYKSLPKLVHAKEGF 899
Query: 153 VGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
GCL ++ N +L S + C+ + E G
Sbjct: 900 QGCLASVDLNGRLPD---LISDALFCNGQIERG 929
>UNIPROTKB|Q9DDD0 [details] [associations]
symbol:NRXN1 "Neurexin-1" species:9031 "Gallus gallus"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007612 "learning" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0033130 "acetylcholine receptor binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0050839 "cell
adhesion molecule binding" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0051965 "positive
regulation of synapse assembly" evidence=IEA] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0071625
"vocalization behavior" evidence=IEA] [GO:0090129 "positive
regulation of synapse maturation" evidence=IEA] [GO:0097104
"postsynaptic membrane assembly" evidence=IEA] [GO:0097109
"neuroligin family protein binding" evidence=IEA] [GO:0097116
"gephyrin clustering" evidence=IEA] [GO:0097118 "neuroligin
clustering" evidence=IEA] [GO:0097119 "postsynaptic density protein
95 clustering" evidence=IEA] [GO:2000463 "positive regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:2000821 "regulation of grooming behavior" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0009986 GO:GO:0046872
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
eggNOG:NOG302266 HOGENOM:HOG000230481 HOVERGEN:HBG052670
OrthoDB:EOG41G339 PANTHER:PTHR10127:SF309 EMBL:AJ300473
IPI:IPI00571039 IPI:IPI00571531 IPI:IPI00582277 IPI:IPI00586877
IPI:IPI00596273 IPI:IPI00598025 IPI:IPI00598148 IPI:IPI00600703
IPI:IPI00812400 UniGene:Gga.212 ProteinModelPortal:Q9DDD0
SMR:Q9DDD0 STRING:Q9DDD0 InParanoid:Q9DDD0 Uniprot:Q9DDD0
Length = 1363
Score = 167 (63.8 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 355 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLLDMG 413
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 414 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDDLYLG 472
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 473 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRET 532
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 75/312 (24%), Positives = 125/312 (40%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS + AD ++ V L V I + N
Sbjct: 594 EAEDVSLRFRSQRAYGILMATTSRES------ADTLRLELDAGRVKLTVNLDCIRINCNS 647
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 648 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLMVDDQQAMTGQMAGDHTRLE----FH- 701
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 702 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 760
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 761 DPVTFKTKASYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 819
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 820 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTNNLHTVKIDTKITTQ---STAGAR 874
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 875 NLDLKSDLYIGG 886
Score = 144 (55.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 35 KTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGEWHTV 93
KTTS DG+I Y + + D++ + + G +HY F+ G+G + S +K + D +WH V
Sbjct: 790 KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNV 847
Query: 94 EFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTF 152
SR + +KID ++ + S ++ L++ Y+GGV + + + F
Sbjct: 848 MISRDTNNLHTVKIDTKITTQ--STAGARNLDLKSDLYIGGVAKEMYKSLPKLVHAKEGF 905
Query: 153 VGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
GCL ++ N +L S + C+ + E G
Sbjct: 906 QGCLASVDLNGRLPD---LISDALFCNGQIERG 935
>UNIPROTKB|D4ABV7 [details] [associations]
symbol:D4ABV7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0051965
"positive regulation of synapse assembly" evidence=IEA] [GO:0090129
"positive regulation of synapse maturation" evidence=IEA]
InterPro:IPR000742 InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0009986 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0035176
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0071625
OrthoDB:EOG41G339 PANTHER:PTHR10127:SF309 IPI:IPI00560475
ProteinModelPortal:D4ABV7 Ensembl:ENSRNOT00000041827
ArrayExpress:D4ABV7 Uniprot:D4ABV7
Length = 1520
Score = 167 (63.8 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 516 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 574
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 575 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 633
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 634 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRET 693
Score = 160 (61.4 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 755 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 808
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 809 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 862
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 863 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 921
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 922 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 980
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 981 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 1035
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 1036 NLDLKSDLYIGG 1047
Score = 148 (57.2 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 928 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 983
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 984 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1041
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 1042 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 1096
Score = 132 (51.5 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 46/181 (25%), Positives = 80/181 (44%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDGQIHYSFNCGSGPMALSSGDKLILD 87
+ S +KT S + G++ Y D D++ L + + G++ SF+ A D + D
Sbjct: 53 EMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVND 111
Query: 88 GEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTL--VR 143
G WH+V RQ + L ID E K + + +F ++GG+P L + L
Sbjct: 112 GAWHSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTL 171
Query: 144 GNLGLNDTFVGCLRNLKSNNK----------LVQDKHTSSGVIPCS--DKTESGVFFYNS 191
++ + F G +R+++ N+ L ++ S G PC D+ + GV N
Sbjct: 172 ASVREREPFKGWIRDVRVNSSQALPVDGSEVLDEEPPNSGGGSPCEAGDEGDGGVCL-NG 230
Query: 192 G 192
G
Sbjct: 231 G 231
Score = 84 (34.6 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 540 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 596
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+++ T PG SE D ++ +++GG P
Sbjct: 597 FQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 636
Score = 80 (33.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 317 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 375
Query: 268 QWHTIVAIKTKNV 280
WH + T+N+
Sbjct: 376 AWHDVKV--TRNL 386
Score = 39 (18.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 270 HTIVAIKTKNVISVAVDSMTTDKP 293
H +VA K +NV ++ D +T + P
Sbjct: 483 HGVVAFKCENVATL--DPITFETP 504
>UNIPROTKB|Q63372 [details] [associations]
symbol:Nrxn1 "Neurexin-1" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0007612 "learning" evidence=ISS] [GO:0009986
"cell surface" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030534
"adult behavior" evidence=ISS] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050839 "cell adhesion molecule binding" evidence=ISS]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISS] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0051968 "positive regulation of synaptic
transmission, glutamatergic" evidence=ISS] [GO:0060134 "prepulse
inhibition" evidence=ISS] [GO:0090129 "positive regulation of
synapse maturation" evidence=IEA] [GO:0097104 "postsynaptic
membrane assembly" evidence=ISS] [GO:0097109 "neuroligin family
protein binding" evidence=ISS] [GO:0097116 "gephyrin clustering"
evidence=ISS] [GO:0097118 "neuroligin clustering" evidence=ISS]
[GO:0097119 "postsynaptic density protein 95 clustering"
evidence=ISS] [GO:2000463 "positive regulation of excitatory
postsynaptic membrane potential" evidence=ISS] [GO:2000821
"regulation of grooming behavior" evidence=ISS] InterPro:IPR000742
InterPro:IPR027158 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
RGD:628659 GO:GO:0016021 GO:GO:0005886 GO:GO:0009986 GO:GO:0046872
GO:GO:0030054 GO:GO:0007612 GO:GO:0050885 GO:GO:0007155
GO:GO:0042734 GO:GO:0051968 GO:GO:0060134 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0030534 GO:GO:0050839
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:2000463
GO:GO:2000821 GO:GO:0097119 GO:GO:0097104 PDB:3BIW PDBsum:3BIW
GO:GO:0097116 HOVERGEN:HBG052670 KO:K07377 PANTHER:PTHR10127:SF309
CTD:9378 GO:GO:0097109 GO:GO:0097118 EMBL:M96374 IPI:IPI00208055
IPI:IPI00829418 IPI:IPI00829424 IPI:IPI00829429 IPI:IPI00829436
IPI:IPI00829444 IPI:IPI00829446 IPI:IPI00829455 IPI:IPI00829463
IPI:IPI00829476 IPI:IPI00829484 IPI:IPI00829494 IPI:IPI00829507
PIR:A40228 RefSeq:NP_068535.2 UniGene:Rn.54924
ProteinModelPortal:Q63372 SMR:Q63372 PhosphoSite:Q63372
PRIDE:Q63372 GeneID:60391 KEGG:rno:60391 EvolutionaryTrace:Q63372
NextBio:612088 Genevestigator:Q63372 Uniprot:Q63372
Length = 1530
Score = 167 (63.8 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 25 KNKFDFSIDIKTTSEQDGIIFYV-------ADVKH-----IDYVALYVKDGQIHYSFNCG 72
K S D +TT E +G+I + D KH +D+ A+ + DG ++ + G
Sbjct: 522 KKTGSISFDFRTT-EPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMG 580
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
SG + + + K + DGEW+ V+F R SG + ++ + + G S+ L++ YLG
Sbjct: 581 SGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVN-TLRTPYTAPGESEILDLDDELYLG 639
Query: 133 GVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN-KLVQDKHTSSGVIP-CSDKT 182
G+P N + LV LN +VGC+R+L +S + + + + +++GV P CS +T
Sbjct: 640 GLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRET 699
Score = 160 (61.4 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 75/312 (24%), Positives = 124/312 (39%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + I + TTS AD ++ V L V I + N
Sbjct: 761 EAEDVSLRFRSQRAYGILMATTSRDS------ADTLRLELDAGRVKLTVNLDCIRINCNS 814
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP L +G L D EWHTV R+ S KL +D Q G+ G L F+
Sbjct: 815 SKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLE----FH- 868
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
+ T R + F+G L++L N D + + C G
Sbjct: 869 -NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA 927
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLL-SVHSKKDYFILQMIDGSVK 242
V F YV + + M L K ++ GL+L + D+ +++++ G +
Sbjct: 928 DPVTFKTKSSYV-ALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLH 986
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + + P D QWH ++ + T N+ +V +D+ T + G+
Sbjct: 987 YVFDLGNGANLIKGSSNKP--LNDNQWHNVMISRDTSNLHTVKIDTKITTQI---TAGAR 1041
Query: 302 ETDTNNAVFIGG 313
D + ++IGG
Sbjct: 1042 NLDLKSDLYIGG 1053
Score = 148 (57.2 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
+KSS + T+ F KTTS DG+I Y + + D++ + + G +HY F
Sbjct: 934 TKSSYVALATLQAYTSMHLFFQF--KTTS-LDGLILYNSGDGN-DFIVVELVKGYLHYVF 989
Query: 70 NCGSGPMALS-SGDKLILDGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + S +K + D +WH V SR + +KID ++ + ++ L++
Sbjct: 990 DLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQ--ITAGARNLDLKS 1047
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG 185
Y+GGV T + + + F GCL ++ N +L S + C+ + E G
Sbjct: 1048 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPD---LISDALFCNGQIERG 1102
Score = 130 (50.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 46/181 (25%), Positives = 78/181 (43%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYV-KDGQIHYSFNCGSGPMALSSGDKLILD 87
+ S +KT S + G++ Y D D++ L + + G++ SF+ A D + D
Sbjct: 53 EMSFQLKTRSAR-GLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVND 111
Query: 88 GEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTL--VR 143
G WH+V RQ + L ID E K + + +F ++GG+P L + L
Sbjct: 112 GAWHSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTL 171
Query: 144 GNLGLNDTFVGCLRNLKSNN-----------KLVQDKHTSSGVIPCSDKTES-GVFFYNS 191
++ + F G +R+++ N+ KL ++ S G PC E G N
Sbjct: 172 ASVREREPFKGWIRDVRVNSSQALPVDGSEVKLDEEPPNSGGGSPCEAGDEGDGGVCLNG 231
Query: 192 G 192
G
Sbjct: 232 G 232
Score = 84 (34.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 214 KPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIV 273
KPR+ K D+F ++M+DG + +D G G I DG+W+ +
Sbjct: 546 KPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVN---DGEWYHVD 602
Query: 274 AIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ +++V+++ T PG SE D ++ +++GG P
Sbjct: 603 FQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLP 642
Score = 80 (33.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 323 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 381
Query: 268 QWHTIVAIKTKNV 280
WH + T+N+
Sbjct: 382 AWHDVKV--TRNL 392
Score = 44 (20.5 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 13/60 (21%), Positives = 27/60 (45%)
Query: 195 VKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISA 254
V+G+ +G + + K D ++ L++ K++Y + GS D + PI +
Sbjct: 262 VEGLAHLMMGDQGKSKEDNNVEGLAHLMMGDQGKEEY--IATFKGSEYFCYDLSQNPIQS 319
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 270 HTIVAIKTKNVISVAVDSMTTDKP 293
H +VA K +NV ++ D +T + P
Sbjct: 489 HGVVAFKCENVATL--DPITFETP 510
>UNIPROTKB|Q8WYK1 [details] [associations]
symbol:CNTNAP5 "Contactin-associated protein-like 5"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 EMBL:CH471103
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 CTD:129684 EMBL:AB077881 EMBL:AC019105
EMBL:AC019159 EMBL:AC074362 EMBL:AC079154 EMBL:AC097715
EMBL:AC104648 EMBL:AK056528 IPI:IPI00292300 RefSeq:NP_570129.1
UniGene:Hs.660653 HSSP:P01132 ProteinModelPortal:Q8WYK1 SMR:Q8WYK1
STRING:Q8WYK1 PhosphoSite:Q8WYK1 DMDM:74716461 PaxDb:Q8WYK1
PRIDE:Q8WYK1 DNASU:129684 Ensembl:ENST00000431078 GeneID:129684
KEGG:hsa:129684 UCSC:uc002tno.3 GeneCards:GC02P124879
HGNC:HGNC:18748 MIM:610519 neXtProt:NX_Q8WYK1 PharmGKB:PA134898715
InParanoid:Q8WYK1 OMA:FANRRMH GenomeRNAi:129684 NextBio:82625
Bgee:Q8WYK1 CleanEx:HS_CNTNAP5 Genevestigator:Q8WYK1 Uniprot:Q8WYK1
Length = 1306
Score = 165 (63.1 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 79/308 (25%), Positives = 129/308 (41%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG------DKL 84
I +K S Q DG++F+ + + D++ L ++ G++ N G LSS L
Sbjct: 205 ISLKFKSMQGDGVLFH-GEGQRGDHITLELQKGRLALHLNLGDSKARLSSSLPSATLGSL 263
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
+ D WH+V R +D +KG + L+I GG+P V G
Sbjct: 264 LDDQHWHSVLIERVGKQVNFTVDKHT-QHFRTKGETDALDIDYELSFGGIP------VPG 316
Query: 145 NLG--LNDTFVGCLRNLKSNNKLVQD-----KH---TSSGVIPCSDKTESGVFFYNSGG- 193
G L F GC+ NL N + D KH T + CS+ + F NS G
Sbjct: 317 KPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYTGNVTFSCSEPQIVPITFVNSSGS 376
Query: 194 YV--KGVEQFRVGREMELKMDVKPRNISGLLLSVH-SKKDYFILQMIDGSV-KATVDNGK 249
Y+ G Q G + + + N GLLLS S+ +L ++G + + +
Sbjct: 377 YLLLPGTPQID-G--LSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGILRLVIQKMT 433
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS--ETDTNN 307
++ I T S+ DG WH++ +N I++ +D D+ P S+ + + N
Sbjct: 434 ERVAEILTGSN---LNDGLWHSVSINARRNRITLTLD----DEAAPPAPDSTWVQIYSGN 486
Query: 308 AVFIGGHP 315
+ + GG P
Sbjct: 487 SYYFGGCP 494
Score = 129 (50.5 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 51/194 (26%), Positives = 83/194 (42%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKD-GQIHYS 68
+++S + +PT F D S KTT+ G+ +K D++ L + +I ++
Sbjct: 797 TEASYLHFPTFHAEFSA--DISFFFKTTA-LSGVFLENLGIK--DFIRLEISSPSEITFA 851
Query: 69 FNCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+GP+ L L+ D +WH V R L++D + E+ G
Sbjct: 852 IDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDNLPRSTRETSEE-------G 904
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIP-CSDKTE 183
F L LN+ V G F+GC+R+L N + L + +SGV P C
Sbjct: 905 HFRL---QLNSQLFVGGTSSRQKGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGCPGHCS 961
Query: 184 S-GVFFYNSGGYVK 196
S G +N G V+
Sbjct: 962 SYGSICHNGGKCVE 975
Score = 38 (18.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 8/46 (17%), Positives = 23/46 (50%)
Query: 236 MIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVI 281
+ + S VD+ ++ +++ SDP+ D + A+++ + +
Sbjct: 1194 LTESSCGFMVDSDVNAVTTVHSSSDPFGKTDEREPLTNAVRSDSAV 1239
>FB|FBgn0261451 [details] [associations]
symbol:trol "terribly reduced optic lobes" species:7227
"Drosophila melanogaster" [GO:0005578 "proteinaceous extracellular
matrix" evidence=NAS] [GO:0005604 "basement membrane" evidence=ISS]
[GO:0055059 "asymmetric neuroblast division" evidence=NAS]
[GO:0045199 "maintenance of epithelial cell apical/basal polarity"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0072347 "response to anesthetic" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0005811 EMBL:AE014298 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 GO:GO:0045199 GO:GO:0072347 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF02210 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 UniGene:Dm.14114
GeneID:45320 KEGG:dme:Dmel_CG33950 CTD:45320 FlyBase:FBgn0261451
ChiTaRS:trol GenomeRNAi:45320 NextBio:838006 RefSeq:NP_001027038.2
ProteinModelPortal:Q9W4Y3 SMR:Q9W4Y3 STRING:Q9W4Y3 PRIDE:Q9W4Y3
UCSC:CG33950-RF InParanoid:Q9W4Y3 PhylomeDB:Q9W4Y3
ArrayExpress:Q9W4Y3 Bgee:Q9W4Y3 Uniprot:Q9W4Y3
Length = 4629
Score = 170 (64.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 46/170 (27%), Positives = 80/170 (47%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHI-DYVALYVKDGQIHYSFNC 71
S + +PT+ KF+F + + + DG++ + + DY+AL +KD + F+
Sbjct: 3934 SYMSFPTLPNS-SFKFNFELTFRPENG-DGLLLFNGQTRGSGDYIALSLKDRYAEFRFDF 3991
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
G PM + + + L L+ EWHTV SR + G +++D Q + L++ Y+
Sbjct: 3992 GGKPMLVRAEEPLALN-EWHTVRVSRFKRDGYIQVDEQHPVAFPTLQQIPQLDLIEDLYI 4050
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPC 178
GGVP N L + FVGC+ L + L+++ G+ C
Sbjct: 4051 GGVP-NWELLPADAVSQQVGFVGCISRLTLQGRTVELIREAKYKEGITDC 4099
Score = 128 (50.1 bits), Expect = 0.00047, P = 0.00047
Identities = 38/166 (22%), Positives = 78/166 (46%)
Query: 27 KFDFSIDIKTTSEQDGIIFYVAD--VKHIDYVALYVKDGQIHYSFNCGS--GPMALSSGD 82
K + ++ ++ S +D +I Y A+ + DY+AL ++ G N + P+ + S +
Sbjct: 4200 KVNITLSVRPASLEDSVILYTAESTLPSGDYLALVLRGGHAELLINTAARLDPVVVRSAE 4259
Query: 83 KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLV 142
L L+ W +E R+ G L++ + ++ GS + L++ Y+GG +T +
Sbjct: 4260 PLPLN-RWTRIEIRRRLGEGILRVGDGPERKAKAPGSDRILSLKTHLYVGGYDRSTVKVN 4318
Query: 143 RGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIPCSDKTESG 185
R ++ + F GC+ L + K L+ D ++ + C + G
Sbjct: 4319 R-DVNITKGFDGCISRLYNFQKPVNLLADIKDAANIQSCGETNMIG 4363
>UNIPROTKB|Q9C0A0 [details] [associations]
symbol:CNTNAP4 "Contactin-associated protein-like 4"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS00514
PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718 eggNOG:NOG291100
HOGENOM:HOG000230964 EMBL:AB100093 EMBL:AB051550 EMBL:AC010528
EMBL:AC106741 IPI:IPI00216250 IPI:IPI00644276 RefSeq:NP_207837.2
RefSeq:NP_620481.2 UniGene:Hs.461389 ProteinModelPortal:Q9C0A0
SMR:Q9C0A0 IntAct:Q9C0A0 MINT:MINT-241176 STRING:Q9C0A0
PhosphoSite:Q9C0A0 DMDM:209572753 PaxDb:Q9C0A0 PRIDE:Q9C0A0
DNASU:85445 Ensembl:ENST00000307431 Ensembl:ENST00000478060
GeneID:85445 KEGG:hsa:85445 UCSC:uc002feu.1 CTD:85445
GeneCards:GC16P076311 HGNC:HGNC:18747 HPA:HPA031859 MIM:610518
neXtProt:NX_Q9C0A0 PharmGKB:PA134874662 InParanoid:Q9C0A0
GenomeRNAi:85445 NextBio:76043 ArrayExpress:Q9C0A0 Bgee:Q9C0A0
CleanEx:HS_CNTNAP4 Genevestigator:Q9C0A0 GermOnline:ENSG00000152910
Uniprot:Q9C0A0
Length = 1308
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 81/319 (25%), Positives = 128/319 (40%)
Query: 32 IDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG------DKL 84
I +K T + DGI+ + + + D++ L ++ ++ N G + +S L
Sbjct: 208 ISLKFKTMQSDGILLH-REGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSL 266
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
+ D WH+V R +D + ++G +N+ GG+P ++
Sbjct: 267 LDDQHWHSVLIQRLGKQVNFTVD-EHRHHFHARGEFNLMNLDYEISFGGIPAPGKSVSFP 325
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQD--KHTSSGVIP-------CSDKTESGVFFYNSGGYV 195
+ F GCL NL N + D K +I CS V F +S Y+
Sbjct: 326 HRN----FHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYL 381
Query: 196 KGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAI 255
+ F E+ + N +GLLL + LQ+I G + + +GK S +
Sbjct: 382 -ALPDFSGEEEVSATFQFRTWNKAGLLL-------FSELQLISGGILLFLSDGKLK-SNL 432
Query: 256 YTP----SD---PYFFCDGQWHTIVAIKTKNVISVAVDS-MTTDKPGLGPPGSSETDTNN 307
Y P SD DGQWH++ KN +SVAVD M + P LGP + +
Sbjct: 433 YQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGP---EQIYSGG 489
Query: 308 AVFIGGHPFLSLSSKKSGP 326
+ GG P S SK P
Sbjct: 490 TYYFGGCPDKSFGSKCKSP 508
Score = 114 (45.2 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 37/160 (23%), Positives = 81/160 (50%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY-VALYVKDGQIHYS 68
S S + P +G + + + +T ++ G++ + ++++ I + L++ DG++ +
Sbjct: 376 SSRSYLALPDFSG--EEEVSATFQFRTWNKA-GLLLF-SELQLISGGILLFLSDGKLKSN 431
Query: 69 -FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G P +++G +L DG+WH+V S ++ + +DGQ+ + G + + G
Sbjct: 432 LYQPGKLPSDITAGVELN-DGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYS-GG 489
Query: 128 PFYLGGVPLNT-STLVRGNLGLNDTFVGCLRNLKSNNKLV 166
+Y GG P + + + LG F GC+R + + K+V
Sbjct: 490 TYYFGGCPDKSFGSKCKSPLG---GFQGCMRLISISGKVV 526
Score = 83 (34.3 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 29/111 (26%), Positives = 44/111 (39%)
Query: 208 ELKMDV----KPRNISGLLLSVHSKKDYFILQMIDGSVKA-TVDNGKGPISAIYTPSDPY 262
EL DV K SG+ L D+ +++ +V + D G GP + P
Sbjct: 812 ELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEI--SVQSPT 869
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
F D QWH + + S+ VD +T G N+ +F+GG
Sbjct: 870 HFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGG 920
Score = 52 (23.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 24/100 (24%), Positives = 42/100 (42%)
Query: 190 NSGGYVKGVE-QFRVGREMELKMDVKPRNISGLLLSVHS-KKDYF-ILQMIDGSVKATVD 246
NS + ++ REM +K + LLL V S K+Y ++ +GS++
Sbjct: 1023 NSSSHAASFHGDMKLSREM-IKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYK 1081
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
K + D DGQ H I+ + + V+ + +D
Sbjct: 1082 LNKYQEPDVVN-FDFKNMADGQLHHIMINREEGVVFIEID 1120
>UNIPROTKB|E9PDN6 [details] [associations]
symbol:CNTNAP4 "Contactin-associated protein-like 4"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 EMBL:AC010528 EMBL:AC106741
IPI:IPI00216250 HGNC:HGNC:18747 ProteinModelPortal:E9PDN6
SMR:E9PDN6 PRIDE:E9PDN6 Ensembl:ENST00000476707 UCSC:uc002fex.1
OMA:CMRLISI ArrayExpress:E9PDN6 Bgee:E9PDN6 Uniprot:E9PDN6
Length = 1311
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 81/319 (25%), Positives = 128/319 (40%)
Query: 32 IDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG------DKL 84
I +K T + DGI+ + + + D++ L ++ ++ N G + +S L
Sbjct: 211 ISLKFKTMQSDGILLH-REGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSL 269
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
+ D WH+V R +D + ++G +N+ GG+P ++
Sbjct: 270 LDDQHWHSVLIQRLGKQVNFTVD-EHRHHFHARGEFNLMNLDYEISFGGIPAPGKSVSFP 328
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQD--KHTSSGVIP-------CSDKTESGVFFYNSGGYV 195
+ F GCL NL N + D K +I CS V F +S Y+
Sbjct: 329 HRN----FHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYL 384
Query: 196 KGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAI 255
+ F E+ + N +GLLL + LQ+I G + + +GK S +
Sbjct: 385 -ALPDFSGEEEVSATFQFRTWNKAGLLL-------FSELQLISGGILLFLSDGKLK-SNL 435
Query: 256 YTP----SD---PYFFCDGQWHTIVAIKTKNVISVAVDS-MTTDKPGLGPPGSSETDTNN 307
Y P SD DGQWH++ KN +SVAVD M + P LGP + +
Sbjct: 436 YQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGP---EQIYSGG 492
Query: 308 AVFIGGHPFLSLSSKKSGP 326
+ GG P S SK P
Sbjct: 493 TYYFGGCPDKSFGSKCKSP 511
Score = 114 (45.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 37/160 (23%), Positives = 81/160 (50%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY-VALYVKDGQIHYS 68
S S + P +G + + + +T ++ G++ + ++++ I + L++ DG++ +
Sbjct: 379 SSRSYLALPDFSG--EEEVSATFQFRTWNKA-GLLLF-SELQLISGGILLFLSDGKLKSN 434
Query: 69 -FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G P +++G +L DG+WH+V S ++ + +DGQ+ + G + + G
Sbjct: 435 LYQPGKLPSDITAGVELN-DGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYS-GG 492
Query: 128 PFYLGGVPLNT-STLVRGNLGLNDTFVGCLRNLKSNNKLV 166
+Y GG P + + + LG F GC+R + + K+V
Sbjct: 493 TYYFGGCPDKSFGSKCKSPLG---GFQGCMRLISISGKVV 529
Score = 83 (34.3 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 29/111 (26%), Positives = 44/111 (39%)
Query: 208 ELKMDV----KPRNISGLLLSVHSKKDYFILQMIDGSVKA-TVDNGKGPISAIYTPSDPY 262
EL DV K SG+ L D+ +++ +V + D G GP + P
Sbjct: 815 ELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEI--SVQSPT 872
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
F D QWH + + S+ VD +T G N+ +F+GG
Sbjct: 873 HFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGG 923
Score = 52 (23.4 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 24/100 (24%), Positives = 42/100 (42%)
Query: 190 NSGGYVKGVE-QFRVGREMELKMDVKPRNISGLLLSVHS-KKDYF-ILQMIDGSVKATVD 246
NS + ++ REM +K + LLL V S K+Y ++ +GS++
Sbjct: 1026 NSSSHAASFHGDMKLSREM-IKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYK 1084
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
K + D DGQ H I+ + + V+ + +D
Sbjct: 1085 LNKYQEPDVVN-FDFKNMADGQLHHIMINREEGVVFIEID 1123
>UNIPROTKB|F1PAM8 [details] [associations]
symbol:CNTNAP4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030425 "dendrite" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00008 Pfam:PF00754 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0030425 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS51406
Pfam:PF02210 GeneTree:ENSGT00560000076804 CTD:85445 OMA:CMRLISI
EMBL:AAEX03004061 RefSeq:XP_536775.2 ProteinModelPortal:F1PAM8
Ensembl:ENSCAFT00000031919 GeneID:479642 KEGG:cfa:479642
Uniprot:F1PAM8
Length = 1309
Score = 134 (52.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 39/160 (24%), Positives = 84/160 (52%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY-VALYVKDGQIHYS 68
S S + P +G +++ S +T ++ G++ + ++++ + + L++ DG++ +
Sbjct: 376 SPRSYLALPGFSG--EDELSASFQFRTWNKA-GLLLF-SELQLVSGGLLLFLNDGKLKLN 431
Query: 69 -FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G P +++G + DG+WH++ S ++ + +DGQV + S G + L G
Sbjct: 432 LYQPGRLPSDITAGVVGLNDGQWHSISLSARRNHLSMVVDGQVASAASSLGPEQ-LYSGG 490
Query: 128 PFYLGGVPLNT-STLVRGNLGLNDTFVGCLRNLKSNNKLV 166
+Y GG P N+ + + L D F GC+R + +N++V
Sbjct: 491 TYYFGGCPDNSFGSKCKNPL---DGFQGCMRLISISNRIV 527
Score = 129 (50.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 76/321 (23%), Positives = 128/321 (39%)
Query: 32 IDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSG-PMA------LSSGDK 83
I +K T + DGI+ + + ++ D++ L ++ G++ N G P + L+ G
Sbjct: 208 ISLKFKTMQSDGILLH-REGQNGDHITLELRRGRLFLLINSGEAKPPSTHTLINLTLGS- 265
Query: 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR 143
L+ D WH+V +D + ++G L++ GG+P ++
Sbjct: 266 LLDDQHWHSVLIQHVGKQVNFTVD-EHRHRFHAQGEFGYLDLDHEISFGGIPAPGKSVSF 324
Query: 144 GNLGLNDTFVGCLRNLKSNNKLVQD--KHTSSGVIP-------CSDKTESGVFFYNSGGY 194
+ F GCL NL N + D K +I CS V F + Y
Sbjct: 325 PH----KNFHGCLENLYYNGVDIIDLAKRQKPEIIAMGNVSFSCSQSQSVPVTFLSPRSY 380
Query: 195 VKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISA 254
+ + F E+ + N +GLLL + LQ++ G + +++GK ++
Sbjct: 381 L-ALPGFSGEDELSASFQFRTWNKAGLLL-------FSELQLVSGGLLLFLNDGKLKLN- 431
Query: 255 IYTP----SD----PYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPG-LGPPGSSETDT 305
+Y P SD DGQWH+I +N +S+ VD LGP + +
Sbjct: 432 LYQPGRLPSDITAGVVGLNDGQWHSISLSARRNHLSMVVDGQVASAASSLGP---EQLYS 488
Query: 306 NNAVFIGGHPFLSLSSKKSGP 326
+ GG P S SK P
Sbjct: 489 GGTYYFGGCPDNSFGSKCKNP 509
Score = 77 (32.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 28/111 (25%), Positives = 43/111 (38%)
Query: 208 ELKMDV----KPRNISGLLLSVHSKKDYFILQMIDGSVKA-TVDNGKGPISAIYTPSDPY 262
EL DV K SG+ L D+ +++ +V + D G GP + P
Sbjct: 813 ELSADVSFFFKTTASSGVFLENLGITDFIRIELRSPAVVTFSFDVGNGPFEI--SVQSPT 870
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
F D QWH + + S+ VD + G N+ +F+GG
Sbjct: 871 HFNDNQWHHVRVERNMKEASLRVDQLLPKTQPAPADGHVLLQLNSQLFVGG 921
Score = 45 (20.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 23/100 (23%), Positives = 41/100 (41%)
Query: 190 NSGGYVKGVE-QFRVGREMELKMDVKPRNISGLLLSVHS-KKDYF-ILQMIDGSVKATVD 246
NS + ++ REM +K + LLL V S K+Y ++ +GS++
Sbjct: 1024 NSSSHAASFHGDMKLSREM-IKFSFRTTRAPSLLLYVSSFYKEYLSVIIAKNGSLQIRYK 1082
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
+ + D DGQ H + + + V+ V +D
Sbjct: 1083 LNRYQEPDVIN-FDFKNMADGQLHHVDINREEGVVFVEID 1121
>UNIPROTKB|I3LGD9 [details] [associations]
symbol:I3LGD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043236 "laminin binding" evidence=IEA] [GO:0043113
"receptor clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
InterPro:IPR011497 GeneTree:ENSGT00530000063501 EMBL:FP565685
Ensembl:ENSSSCT00000026215 Uniprot:I3LGD9
Length = 2039
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/152 (25%), Positives = 68/152 (44%)
Query: 30 FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
F + ++T + Q +++ + DY+AL + DG + +++ GS P+ L S +
Sbjct: 1887 FELSLRTEATQGLVLWSGKATERADYIALAIVDGHLQLTYDLGSQPVVLRS-TVAVNTNR 1945
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLN 149
W V R Q G L++ + G S + L+ G +LGG+ +
Sbjct: 1946 WLRVRAHRDQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLEKLPGGQALPK-AYS 2004
Query: 150 DTFVGCLRNLKSNNK---LVQDKHTSSGVIPC 178
FVGCLR++ + L++D T + PC
Sbjct: 2005 TGFVGCLRDVVVGRRPLHLLEDAVTKPELRPC 2036
Score = 134 (52.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 42/157 (26%), Positives = 80/157 (50%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG 72
S + +PT+ R + +++ + E +G++ Y + + D++AL + G++ F+ G
Sbjct: 1380 SFLAFPTL--RAYHTLRLALEFRAL-EPEGLLLYNGNARGKDFLALALLGGRVQLRFDTG 1436
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGES-KGSSKTLNIF-GPFY 130
SGP L+S + G WH +E SR G L + G+ + G + + + GP +
Sbjct: 1437 SGPAVLTSSVP-VQPGRWHRLELSRHWRRGTLSVGGRRPRGVQCHSGLREGVPLTPGP-H 1494
Query: 131 LGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ 167
LGG L +++ ++GL GC+R L NN+ ++
Sbjct: 1495 LGGRVLERTSV---SVGLR----GCIRLLDVNNQRLE 1524
Score = 107 (42.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 54 DYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKI-DGQVVA 112
D+V+L + + + + ++ G G + S + + L G W V R G +++ DG V
Sbjct: 1683 DFVSLALHNRLLEFRYDLGRGRRSSGSKEPVAL-GVWTRVSLERNGRKGAMRVGDGPRVL 1741
Query: 113 EGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK-LVQDKHT 171
GES LN+ P Y+GG P + S L R ++ F G ++ + N + L+ +H
Sbjct: 1742 -GESPVPHTILNLKEPLYIGGAP-DFSRLARA-AAVSSGFDGAIQLVALNGRQLLTREHV 1798
Query: 172 SSGV 175
V
Sbjct: 1799 VQAV 1802
Score = 81 (33.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 28/124 (22%), Positives = 56/124 (45%)
Query: 194 YVKGV-EQFRVGREMELKMDVKPRNISGLLL---SVHSKKDYFILQMIDGSVKATVDNGK 249
Y+ V E + + ++ ++ GL+L + DY L ++DG ++ T D G
Sbjct: 1871 YLNAVTESEKALQSNHFELSLRTEATQGLVLWSGKATERADYIALAIVDGHLQLTYDLGS 1930
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAV 309
P+ T + +W + A + + S+ V + G P G+++ DT+ A+
Sbjct: 1931 QPVVLRSTVA----VNTNRWLRVRAHRDQREGSLQVGN-EAPVTGSSPLGATQLDTDGAL 1985
Query: 310 FIGG 313
++GG
Sbjct: 1986 WLGG 1989
Score = 64 (27.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 39/141 (27%), Positives = 63/141 (44%)
Query: 189 YNSGGYV--KGVEQFR--VGREMELKMDVKPRNISGLLL----SVHSKKDYFILQMIDGS 240
+NS Y+ KG+ F +G +MEL++ R SGLLL K D+ L + +
Sbjct: 1634 FNSFSYLELKGLHTFERDLGEKMELEVVFLARGPSGLLLYNGQKTDGKGDFVSLALHNRL 1693
Query: 241 VKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKP---GLGP 297
++ D G+G S+ +P G W T V+++ +N A+ D P G P
Sbjct: 1694 LEFRYDLGRGRRSS--GSKEPVAL--GVW-TRVSLE-RNGRKGAM--RVGDGPRVLGESP 1745
Query: 298 PGSSETDTNNAVFIGGHPFLS 318
+ + ++IGG P S
Sbjct: 1746 VPHTILNLKEPLYIGGAPDFS 1766
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 51/154 (33%), Positives = 75/154 (48%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S+ I T E +G++ Y D +HI V LY G++ S++ GS P + + I DG
Sbjct: 1166 NISLQI-ATDEDNGVLLYKGDNEHIA-VELY--RGRLRVSYDSGSYPPSAIYSVETINDG 1221
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTL-VRGNLG 147
+H VE + S L IDG + S + P YLGG+P + +R G
Sbjct: 1222 SFHVVELVAKDQSLSLSIDGGSPKSINTANSPSPVPSPAPLYLGGLPQQSGLASLRQGSG 1281
Query: 148 LN-DTFVGCLRNLKSNNKLVQDKHT---SSGVIP 177
N +F GC+RNL N++L QD GV+P
Sbjct: 1282 RNGSSFHGCIRNLYINDQL-QDLTQFLLQEGVVP 1314
>ZFIN|ZDB-GENE-050425-1 [details] [associations]
symbol:fat1 "FAT tumor suppressor homolog 1"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA;ISS] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA;ISS] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR018097 InterPro:IPR020894
Pfam:PF00008 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-050425-1 GO:GO:0016021 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156 Pfam:PF02210
OMA:PYEAFIV HOGENOM:HOG000046499 HOVERGEN:HBG005641 EMBL:BX511093
EMBL:BX537280 EMBL:BX908758 IPI:IPI00866597
Ensembl:ENSDART00000145068 InParanoid:A2BGT8 OrthoDB:EOG47WNMQ
Uniprot:A2BGT8
Length = 4611
Score = 166 (63.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 43/148 (29%), Positives = 68/148 (45%)
Query: 17 YPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM 76
Y + K + S+ ++T S +++ K DY L + +G++ Y F+CGSGP
Sbjct: 3848 YRLMENENKEEMKLSLRLRTFSTHATVMY----AKGTDYSILEIVNGRLQYKFDCGSGPG 3903
Query: 77 ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL 136
+S + DG+WHTV +L +D A G + G+ +TLN+ Y GG
Sbjct: 3904 VVSVHSTQVSDGQWHTVSLEVDGNYARLVLDQVHAASGTAPGTLRTLNLDTSMYFGGHVR 3963
Query: 137 NTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
S G L +N GCL + N +
Sbjct: 3964 PASG--SGRLVMNG-LRGCLEGIVFNGR 3988
>MGI|MGI:3646013 [details] [associations]
symbol:Cntnap5c "contactin associated protein-like 5C"
species:10090 "Mus musculus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
MGI:MGI:3646013 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 GeneTree:ENSGT00560000076804
OrthoDB:EOG441Q9K EMBL:AC118684 EMBL:AC120548 EMBL:AC122209
EMBL:AC127557 EMBL:AC154498 EMBL:CT025622 EMBL:CT025736
EMBL:BN000867 IPI:IPI00624911 RefSeq:NP_001075122.1
UniGene:Mm.391030 ProteinModelPortal:Q0V8T7 SMR:Q0V8T7 PRIDE:Q0V8T7
DNASU:620292 Ensembl:ENSMUST00000076038 GeneID:620292
KEGG:mmu:620292 UCSC:uc008dew.1 CTD:620292 InParanoid:Q0V8T7
OMA:KEAICIN NextBio:415135 Bgee:Q0V8T7 CleanEx:MM_CNTNAP5C
Genevestigator:Q0V8T7 Uniprot:Q0V8T7
Length = 1305
Score = 160 (61.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 76/306 (24%), Positives = 136/306 (44%)
Query: 32 IDIKTTS-EQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL-----I 85
I +K S ++DG++F+ + + D++ L +++G++ N +SS L +
Sbjct: 205 ISLKFKSIQRDGVLFH-GEGQRGDHITLELQNGRLALYLNLDDSKAQVSSTAPLATLGSL 263
Query: 86 LDGE-WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
LD + WH+V R +D ++KG + L+I GG+P+ + G
Sbjct: 264 LDDQHWHSVLLERVGKQANFTVDKNT-QHFQTKGETDALDIDYELSFGGIPVPSKP---G 319
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQD-----KHTS-SGVIP--CSDKTESGVFFYNS-GGYV 195
L F GC+ NL N + D KH SG + CS+ + F NS Y+
Sbjct: 320 TF-LKKNFHGCIENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQTVPITFVNSRSSYL 378
Query: 196 --KGVEQFRVGREMELKMDVKPRNISGLLLSVH-SKKDYFILQMIDG-SVKATVDNGKGP 251
G Q G + + + N GLLLS S+ +L +++G +++ +
Sbjct: 379 LLTGTPQID-G--LSVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKLARH 435
Query: 252 ISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS--ETDTNNAV 309
+ I+T S DG WH++ +N +++ +D+ D L PP +S + + N+
Sbjct: 436 GTEIFTGSG---LNDGMWHSVSISARRNRVTLTLDN---DAASL-PPDTSWLQIYSGNSY 488
Query: 310 FIGGHP 315
+ GG P
Sbjct: 489 YFGGCP 494
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 34/114 (29%), Positives = 51/114 (44%)
Query: 201 FRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGS-VKATVDNGKGPISAIYTPS 259
FRV ++ K +SG+ L + KD+ L+M S V +D G GPI +
Sbjct: 807 FRVEFSADIFFFFKTTALSGVFLEILGIKDFLRLEMSSPSEVIFAIDVGNGPIDLLV--Q 864
Query: 260 DPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
PY D QWH I A + S+ VD++ G + N+ +F+GG
Sbjct: 865 SPYPLNDNQWHYIRAERNLKETSLQVDNLPQSMREASEEGHFQFQLNSQLFVGG 918
>ZFIN|ZDB-GENE-061013-657 [details] [associations]
symbol:pros1 "protein S (alpha)" species:7955
"Danio rerio" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000294
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00594 Pfam:PF07645 PRINTS:PR00001 PROSITE:PS00011
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50998 SMART:SM00069
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-061013-657 GO:GO:0005576 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 Pfam:PF00054 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210 Gene3D:4.10.740.10
InterPro:IPR017857 SUPFAM:SSF57630 HOGENOM:HOG000065758
HOVERGEN:HBG051702 CTD:5627 eggNOG:NOG124763 KO:K03908
OrthoDB:EOG4PRSQB EMBL:BC124790 IPI:IPI00803518
RefSeq:NP_001070791.1 UniGene:Dr.82490 ProteinModelPortal:Q08BB9
SMR:Q08BB9 GeneID:768180 KEGG:dre:768180 InParanoid:Q08BB9
NextBio:20918495 Uniprot:Q08BB9
Length = 673
Score = 156 (60.0 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 56/218 (25%), Positives = 107/218 (49%)
Query: 23 RFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD 82
RF +FDF T + +G+I Y A+ ++ L ++ G+I F + ++SG
Sbjct: 323 RFAAEFDFR-----TFDPEGVILY-AESSPDSWIMLGLRSGRIEVQFK-NEHSIKMTSGG 375
Query: 83 KLILDGEWHTVEFSRQQLSGKL--KIDGQVVAEGESKGSSKT-LN--IFGPFYLGGVPLN 137
K I DG+WH + S ++LSG + KI + V S T +N + Y+ G+P +
Sbjct: 376 KAINDGQWHVI--SVEELSGSISVKISKEAVMSINSPERLFTPVNDKLETKVYIAGLPNH 433
Query: 138 TSTLVRGNLGLNDTFVGCLR--NLKSNN-----KLVQDKHTSSGVIPCSDKTESGVFFYN 190
+L++ +N GC+R NL + +++Q+K + C E G FF
Sbjct: 434 NQSLIKT---INPRLDGCIRGWNLMNQGASGVKEVIQEKESKH----CYVHVEKGSFFSG 486
Query: 191 SGGYVKGVEQFRVGR-EMELKMDVKPRNISGLLLSVHS 227
G + ++ G+ ++++ M ++P + +G++L++ S
Sbjct: 487 GGHALFNIDYSVSGQWKLDVVMSLRPSSTTGVILALVS 524
>WB|WBGene00002248 [details] [associations]
symbol:lam-3 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030155 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
HSSP:P02468 Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 KO:K05637 GO:GO:0005606 EMBL:Z81125
EMBL:AF074902 EMBL:AL008585 PIR:F87908 PIR:T23064 PIR:T43291
RefSeq:NP_492775.2 UniGene:Cel.19655 ProteinModelPortal:G5ECE3
SMR:G5ECE3 EnsemblMetazoa:T22A3.8 GeneID:172952
KEGG:cel:CELE_T22A3.8 CTD:172952 WormBase:T22A3.8 OMA:TAINEAH
NextBio:877661 Uniprot:G5ECE3
Length = 3102
Score = 155 (59.6 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 58/226 (25%), Positives = 102/226 (45%)
Query: 41 DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQL 100
+G++++ D+VA+Y+ DG++ + N G G +A + + DG+ HTV+ R
Sbjct: 2502 NGLLYFRGSEASGDFVAIYLNDGKVMFKINLGGGSVAELTSQNVYNDGKEHTVKAIRTGS 2561
Query: 101 SGKLKIDGQVVAEGES-KGSSKTLNIFGP-FYLGGVPLNTSTLVRGNLGLNDTFVGCLRN 158
L++D G + LNI Y+ GVP+ + V G++ N F+GC+
Sbjct: 2562 EMYLQVDSDADRFNTVITGENTALNIENENHYVAGVPMTLNKEVFGDINWNG-FIGCILT 2620
Query: 159 LKSNN--KLVQD--KHTSSGVIPCSDKT--ESGVFFYNSGGYV--KGVEQFRVGREMELK 210
+K + +L D +H+ CS + + + GY+ KG+ +
Sbjct: 2621 VKPSQVGELDLDHPEHSQGKTDGCSQVSGVTDKIIGFPKPGYLITKGIS---IDNSSTFA 2677
Query: 211 MDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIY 256
+ R +G L+ SK LQ + S + + D+GKG I A Y
Sbjct: 2678 FSFRTREENGTLVYQSSK-----LQKV--SKRDSEDDGKGYI-AFY 2715
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 48/178 (26%), Positives = 78/178 (43%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSE-QDGIIFYVADVKHID-YVALYVKDGQI 65
G SKSS + N DF++ + +E +G+I+ A+ K+ Y+ L + DG
Sbjct: 2915 GLSKSSHSRI-NFEAPYPNITDFTVKLSLQTETSNGMIWAWANYKNYTRYIFLDIIDGFA 2973
Query: 66 HYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNI 125
P L I DG+WH + ++ S KL ID E + K +
Sbjct: 2974 TLEVKGHKQPKILKHLGNRINDGQWHDITVEKKNRSLKLIIDSLGPVEMTDCPTPKVMK- 3032
Query: 126 FGPFYLGGVPLNTSTLVRGNLGLNDTFV-GCLRNLKSNNKL---VQDKHTSSGVIPCS 179
Y+GGV + R GL + GC+R+ + NN++ + + TS V+PC+
Sbjct: 3033 -KRVYVGGV----ISRHRRQFGLTTPGLDGCIRDFEMNNRIFNNLDEPSTSKNVMPCA 3085
Score = 57 (25.1 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 256 YTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTT-DKPGLGPPGSSETDTNNAVFIGG 313
+ S PY DGQ H + + +ISV VD D L S T T+ + +GG
Sbjct: 2738 FRSSHPYN--DGQVHAVFMERNGKIISVKVDDKEIGDSQSLSDETSVGT-TSGRLILGG 2793
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 158 (60.7 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 45/146 (30%), Positives = 72/146 (49%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+T+E +GI+ Y D HI A+ + +G + S++ GS + + DG++HTVE
Sbjct: 1185 STAEDNGILLYNGDNDHI---AVEIHEGHVKVSYDPGSQQSHAIYSTETVNDGQFHTVEL 1241
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS-TLVR-GNLGLNDTFV 153
L IDG +S G + L P Y+GG+P++ T R + + +F
Sbjct: 1242 VTFDQMVNLSIDGGSPTTMDSFGKVQPLRGEAPLYVGGMPVSVHPTAPRVWQIQNSSSFH 1301
Query: 154 GCLRNLKSNNKLVQDKHTSS--GVIP 177
GC++NL NN+L T GV+P
Sbjct: 1302 GCIQNLYINNELQDFTKTQMKPGVVP 1327
>ZFIN|ZDB-GENE-070206-1 [details] [associations]
symbol:nrxn1a "neurexin 1a" species:7955 "Danio
rerio" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0051965 "positive regulation of synapse assembly" evidence=IEA]
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0090129
"positive regulation of synapse maturation" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR027158
PROSITE:PS50026 SMART:SM00181 ZFIN:ZDB-GENE-070206-1 GO:GO:0016021
GO:GO:0046872 GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 EMBL:DQ641424
IPI:IPI00829233 RefSeq:NP_001073490.1 UniGene:Dr.19533
ProteinModelPortal:A1XQX0 SMR:A1XQX0 Ensembl:ENSDART00000093094
GeneID:565531 KEGG:dre:565531 CTD:565531 eggNOG:NOG302266
GeneTree:ENSGT00560000076996 HOGENOM:HOG000230481
HOVERGEN:HBG052670 InParanoid:A1XQX0 KO:K07377 OMA:NAYACEC
OrthoDB:EOG41G339 NextBio:20885932 ArrayExpress:A1XQX0 Bgee:A1XQX0
PANTHER:PTHR10127:SF309 Uniprot:A1XQX0
Length = 1491
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 72/312 (23%), Positives = 121/312 (38%)
Query: 16 EYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY----VALYVKDGQIHYSFNC 71
E ++ RF+++ + + + TTS+ AD ++ V L V I +
Sbjct: 727 EAEDVSLRFRSQRAYGVLMATTSQNS------ADTLRLELDGGRVRLTVNLDCIRINCTT 780
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GP + SG L D EWHTV R+ S KL +D +EG+ G L F+
Sbjct: 781 SKGPETIFSGQNLN-DNEWHTVRVVRRGKSLKLMVDDLQPSEGQITGDHTQLE----FH- 834
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCSDKTESG------ 185
V T R + F+G L+ L N D + + C G
Sbjct: 835 -NVETGIVTEKRYMPAVPSNFIGHLQGLSFNGMSYIDLCKNGDIDYCELNAMIGYRSIVA 893
Query: 186 --VFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK-KDYFILQMIDGSVK 242
V F + YV + + M L K + GL+L D+ +++++ G +
Sbjct: 894 DPVTFKSRSSYVT-LPTLQAYYSMHLFFQFKTTSPDGLILYNRGDGNDFIVVELVKGYLH 952
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIK-TKNVISVAVDSMTTDKPGLGPPGSS 301
D G G + P D WH ++ + T N+ +V +D+ T + +G +
Sbjct: 953 YVSDLGNGAHLIKGNSNTP--LNDNHWHNVMISRDTNNLHTVKIDTKITTQTTMG---AK 1007
Query: 302 ETDTNNAVFIGG 313
D +++GG
Sbjct: 1008 NLDLKGDLYVGG 1019
Score = 143 (55.4 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 39/137 (28%), Positives = 72/137 (52%)
Query: 53 IDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVA 112
+D+ A+ + DG ++ + GSG + +K + DGEW+ V+F R SG + ++ +
Sbjct: 527 VDFFAIEMLDGHLYLLLDMGSGTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNS-IRT 585
Query: 113 EGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGN----LGLNDTFVGCLRNL----KSNN- 163
+ G S+ L++ YLGG+P + + L+ LN +VGC+R+L +S +
Sbjct: 586 PYNAPGESEILDLDDKLYLGGLPEDRAGLIFPTEVWTALLNYGYVGCVRDLFMDGQSKDI 645
Query: 164 KLVQDKHTSSGVIP-CS 179
+ + + + GV P CS
Sbjct: 646 RRIAEAQRAVGVKPSCS 662
Score = 142 (55.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 44/158 (27%), Positives = 75/158 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S+SS + PT+ + F KTTS DG+I Y + D++ + + G +HY
Sbjct: 900 SRSSYVTLPTLQAYYSMHLFFQF--KTTSP-DGLILYNRGDGN-DFIVVELVKGYLHYVS 955
Query: 70 NCGSGPMALSSGDKLIL-DGEWHTVEFSRQQLS-GKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G+G + L D WH V SR + +KID ++ + + G+ K L++ G
Sbjct: 956 DLGNGAHLIKGNSNTPLNDNHWHNVMISRDTNNLHTVKIDTKITTQ-TTMGA-KNLDLKG 1013
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL 165
Y+GGV + + + + F GCL ++ N +L
Sbjct: 1014 DLYVGGVAKDMYKDLPKLVHSKEGFQGCLASVDLNGRL 1051
Score = 122 (48.0 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 34/138 (24%), Positives = 62/138 (44%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDG 88
+ S ++KT S G++ Y D D++ L + +G++ F+ A D + D
Sbjct: 50 EMSFNMKTKSAH-GLLVYFDDEGFCDFLELLIHNGRLSLRFSIFCAEPATVFSDTAVNDS 108
Query: 89 EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVP--LNTSTLVRGNL 146
WH V R + L +D ++ E K + + +F +LGG+P L + L +
Sbjct: 109 RWHAVTLRRNFKNTTLVVDEEIKWV-EVKSKRRDMTVFSHLFLGGIPPELRSVALRLTSS 167
Query: 147 GLNDT--FVGCLRNLKSN 162
+ D + G + NL+ N
Sbjct: 168 AIKDEVPYKGWITNLRVN 185
Score = 85 (35.0 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 25/89 (28%), Positives = 46/89 (51%)
Query: 228 KKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS 287
K D+F ++M+DG + +D G G T + DG+W+ + + +++V+S
Sbjct: 526 KVDFFAIEMLDGHLYLLLDMGSGTTK---TRAVNKKVNDGEWYHVDFQRDGRSGTISVNS 582
Query: 288 MTTDKPGLGPPGSSET-DTNNAVFIGGHP 315
+ T P PG SE D ++ +++GG P
Sbjct: 583 IRT--P-YNAPGESEILDLDDKLYLGGLP 608
Score = 80 (33.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 208 ELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
E+ + K +GL+L DY L + +G+V ++ G G A+ P + F D
Sbjct: 287 EITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN-DN 345
Query: 268 QWHTIVAIKTKNV 280
WH + T+N+
Sbjct: 346 AWHDVKV--TRNL 356
Score = 52 (23.4 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 28/123 (22%), Positives = 49/123 (39%)
Query: 171 TSSGVIPCSDKTESGVFFYNSG--GYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSK 228
TS G C+D + +F + G Y R L + + +L+ V S
Sbjct: 1101 TSYGGPLCNDPGTTYIFGRDGGLIVYTWPPNDRPSTRADRLAVGFSTQQKDAVLVRVDSS 1160
Query: 229 K---DYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAV 285
DY LQ+ G++K + G I+ T F DG++H + ++ ++ V
Sbjct: 1161 SGLGDYLQLQIERGNIKVVFNVGTDDINIEETSK---FVNDGKYHIVRFTRSGGNATLQV 1217
Query: 286 DSM 288
D +
Sbjct: 1218 DDL 1220
>UNIPROTKB|F1S1F0 [details] [associations]
symbol:CNTNAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 OMA:YANISID EMBL:CU928483
Ensembl:ENSSSCT00000018933 Uniprot:F1S1F0
Length = 634
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 78/322 (24%), Positives = 135/322 (41%)
Query: 15 IEYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
I Y G ++ +D F+ KT E+DG++ + A+ DYV L ++ + + GS
Sbjct: 126 ISYRFPRGVSRSLWDVFAFSFKT-EEKDGLLLH-AEGAQGDYVTLELQGAHLVLHMSLGS 183
Query: 74 GPM-------ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIF 126
P+ +S+G ++ D WH V R L +DG V G + LN+
Sbjct: 184 SPIQPRPGHTTVSAGG-VLNDQHWHYVRVDRFGRDANLTLDGYV-HRFVLNGDFERLNLD 241
Query: 127 GPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQD----KH---TSSGVIP-- 177
++GG+ + NL F GC+ N+ N + D +H T G +
Sbjct: 242 NEMFIGGLV----GAAQKNLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFR 297
Query: 178 CSDKTESGVFFYNSGGYVKGVEQF-RVGREMELKMDVKPRNISGLLL--SVHSKKDYFIL 234
C D + F +V+ V F R GR + + + +++GLLL S+ + L
Sbjct: 298 CLDPVPHPINFGGPHNFVQ-VPGFPRRGR-LAVSFRFRTWDLTGLLLFSSLGDGLGHVEL 355
Query: 235 QMIDGSVKAT-VDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKP 293
+ +G V + V G+ + + Y DG WH + + +N +++D + +
Sbjct: 356 ILSEGQVNVSIVQTGRKKLQF----AAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEV 411
Query: 294 GLGPPGSSETDTNNAVFIGGHP 315
+ P T T+ F GG P
Sbjct: 412 RVSYPLLIRTGTS--YFFGGCP 431
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 155 (59.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 36/133 (27%), Positives = 76/133 (57%)
Query: 36 TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEF 95
+++EQ+GI+ Y H+ V L+ +G+I S++ G+ P++ +++ DG++H VE
Sbjct: 1205 SSAEQNGILMYDGQDAHLA-VELF--NGRIRVSYDVGNHPVSTMYSFEMVADGKYHAVEL 1261
Query: 96 SRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLND--TFV 153
+ + L++D + ++GS+ L + P +LGG+P++ + N + + +F
Sbjct: 1262 LAIKKNFTLRVDRGLARSIINEGSNDYLKLTTPMFLGGLPVDPAQQAYKNWQIRNLTSFK 1321
Query: 154 GCLRNLKSNNKLV 166
GC++ + N+KLV
Sbjct: 1322 GCMKEVWINHKLV 1334
>UNIPROTKB|G5E5W4 [details] [associations]
symbol:CNTNAP4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030425 "dendrite" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] InterPro:IPR000421 InterPro:IPR000742
Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022
PROSITE:PS50026 SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0030425 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 Gene3D:3.90.215.10 InterPro:IPR014716 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 OMA:CMRLISI EMBL:DAAA02046016
EMBL:DAAA02046017 EMBL:DAAA02046018 EMBL:DAAA02046019
EMBL:DAAA02046020 EMBL:DAAA02046021 EMBL:DAAA02046022
EMBL:DAAA02046023 EMBL:DAAA02046024 EMBL:DAAA02046025
Ensembl:ENSBTAT00000036878 Uniprot:G5E5W4
Length = 1291
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 76/319 (23%), Positives = 125/319 (39%)
Query: 32 IDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSG-------PMALSSGDK 83
I +K T + DGI+ + + ++ D++ L ++ G++ N G P+ L+ G
Sbjct: 191 ISLKFKTMQSDGILLH-REGQNGDHITLELRRGKLFLLINSGDAKPPSARAPVRLTLGS- 248
Query: 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR 143
L+ D WH+V R +DG ++G +L++ GG+P +
Sbjct: 249 LLDDQHWHSVLIQRLGTQVNFTVDGHR-RRFRAQGEFSSLHLDYEISFGGIPAPGKPVSF 307
Query: 144 GNLGLNDTFVGCLRNLKSNNKLVQD--KHTSSGVI-------PCSDKTESGVFFYNSGGY 194
+ F GCL NL + + D K +I CS V F + Y
Sbjct: 308 PH----KHFHGCLENLFYDGVDIIDLAKRQDPQMIVMGNVSFSCSQPQSVPVTFLSPRSY 363
Query: 195 VKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISA 254
+ F E+ + N +GLLL LQ++ G + +++GK +
Sbjct: 364 LALPGSFGED-EISATFQFRTWNKAGLLLFTE-------LQLVSGGLLLFLNDGKLKLHL 415
Query: 255 IYT---PSD---PYFFCDGQWHTIVAIKTKNVISVAVDSMTTD-KPGLGPPGSSETDTNN 307
+ PSD DGQWH++ +N +SV VD P GP + +
Sbjct: 416 YHPGKLPSDITAGVGLNDGQWHSVSLSAKRNYLSVVVDGQVASASPSQGP---EQIYSGG 472
Query: 308 AVFIGGHPFLSLSSKKSGP 326
+ GG P S SK P
Sbjct: 473 IFYFGGCPDSSFGSKCKSP 491
Score = 119 (46.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 37/154 (24%), Positives = 82/154 (53%)
Query: 17 YPTITGRF-KNKFDFSIDIKTTSEQDGIIFYVADVKHIDY-VALYVKDGQIH-YSFNCGS 73
Y + G F +++ + +T ++ G++ + +++ + + L++ DG++ + ++ G
Sbjct: 363 YLALPGSFGEDEISATFQFRTWNKA-GLLLFT-ELQLVSGGLLLFLNDGKLKLHLYHPGK 420
Query: 74 GPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGG 133
P +++G L DG+WH+V S ++ + +DGQV + S+G + + G FY GG
Sbjct: 421 LPSDITAGVGLN-DGQWHSVSLSAKRNYLSVVVDGQVASASPSQGPEQIYS-GGIFYFGG 478
Query: 134 VPLNT-STLVRGNLGLNDTFVGCLRNLKSNNKLV 166
P ++ + + LG F GC+R + +++V
Sbjct: 479 CPDSSFGSKCKSPLG---GFQGCMRLISIRHEVV 509
Score = 84 (34.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 29/111 (26%), Positives = 44/111 (39%)
Query: 208 ELKMDV----KPRNISGLLLSVHSKKDYFILQMIDGSVKA-TVDNGKGPISAIYTPSDPY 262
EL DV K SG+ L D+ +++ +V + D G GP + P
Sbjct: 795 ELSADVSFFFKTTASSGVFLENLGITDFIRIELRSPAVVTFSFDVGNGPFEI--SVQSPT 852
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
F D QWH + + SV VD ++ G N+ +F+GG
Sbjct: 853 HFSDNQWHHVRVERNMKEASVRVDQLSPKTQPAPADGHVLLQLNSQLFVGG 903
>RGD|1565194 [details] [associations]
symbol:Cntnap5b "contactin associated protein-like 5B"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00008 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0007165 GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 OrthoDB:EOG441Q9K CTD:241175
UniGene:Rn.202933 EMBL:AABR03084915 EMBL:AABR03084985
EMBL:AABR03085159 EMBL:AABR03085253 EMBL:AABR03085581
EMBL:AABR03085657 EMBL:AABR03085682 EMBL:AABR03085702
EMBL:AABR03086240 EMBL:AABR03086399 EMBL:AABR03086675
EMBL:AABR03086698 EMBL:AABR03086915 EMBL:AABR03087310 EMBL:BN000870
IPI:IPI00363278 RefSeq:NP_001041338.1 ProteinModelPortal:Q0V8T4
PRIDE:Q0V8T4 GeneID:301650 KEGG:rno:301650 UCSC:RGD:1565194
InParanoid:Q0V8T4 NextBio:649055 ArrayExpress:Q0V8T4
Genevestigator:Q0V8T4 Uniprot:Q0V8T4
Length = 1307
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 77/304 (25%), Positives = 130/304 (42%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSS-GDKLIL--- 86
I +K S Q DG++ + + + DY+ L +++G++ N G LSS IL
Sbjct: 206 ISLKFKSMQGDGVLLH-GEGQRGDYITLELQNGRLALYLNLDGGQARLSSIAPSAILGSL 264
Query: 87 --DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
D +WH+V R +D + K + L+I GG+P+ + G
Sbjct: 265 LDDQQWHSVLLERVGKQTNFTVDTNT-EHFQIKAETDALDIDYELSFGGIPIPSKP---G 320
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQD-----KHTS-SGVIP--CSDKTESGVFFYNS-GGYV 195
L +F GC+ NL N + D KH SG + CS+ + F NS Y+
Sbjct: 321 TF-LKKSFHGCIENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQIVPITFVNSRSSYL 379
Query: 196 KGVEQFRVGREMELKMDVKPRNISGLLLSVH-SKKDYFILQMIDG-SVKATVDNGKGPIS 253
R+ + + + N GLLLS S+ +L +++G +++ + G +
Sbjct: 380 LLPGTPRIDG-LSVSFQFRTWNEDGLLLSTELSESSGTLLLILEGGTLRLLIKKVAGHGT 438
Query: 254 AIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS--ETDTNNAVFI 311
I T S DG WH + +N +++ +D+ D L PP S + + N+ +
Sbjct: 439 EIITGSG---LNDGLWHFVSINARRNRVTLTLDN---DAASL-PPDISWLQIYSGNSYYF 491
Query: 312 GGHP 315
GG P
Sbjct: 492 GGCP 495
>RGD|621254 [details] [associations]
symbol:Fat1 "FAT tumor suppressor homolog 1 (Drosophila)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0007015 "actin
filament organization" evidence=ISO] [GO:0007163 "establishment or
maintenance of cell polarity" evidence=ISO] [GO:0016337 "cell-cell
adhesion" evidence=ISO] [GO:0030027 "lamellipodium" evidence=ISO]
[GO:0030054 "cell junction" evidence=ISO] [GO:0030175 "filopodium"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621254 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0031252 GO:GO:0016477
GO:GO:0005509 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 Pfam:PF02210 KO:K16506 HSSP:P01132 CTD:2195
HOGENOM:HOG000046499 HOVERGEN:HBG005641 EMBL:AF100960
IPI:IPI00203286 RefSeq:NP_114007.1 UniGene:Rn.8633
ProteinModelPortal:Q9WU10 IntAct:Q9WU10 STRING:Q9WU10
PhosphoSite:Q9WU10 GeneID:83720 KEGG:rno:83720 InParanoid:Q9WU10
NextBio:616293 Genevestigator:Q9WU10 Uniprot:Q9WU10
Length = 4589
Score = 159 (61.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 41/153 (26%), Positives = 71/153 (46%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
SS ++Y + + + ++ ++T S ++ Y + DY L + G++ Y F+C
Sbjct: 3838 SSFVKYRLMENENRLEMKLTMRLRTYSSH-AVVMYA---RGTDYSILEIHTGRLQYKFDC 3893
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP +S + DG+WH V + KL +D A G + G+ KTLN+
Sbjct: 3894 GSGPGIVSVQSIQVNDGQWHAVSLEVEGNYAKLVLDEVHTASGTAPGALKTLNLDNYVIF 3953
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
GG T N + + F GC+ ++ N +
Sbjct: 3954 GGHLRQQGTKHGRNTQVANGFRGCMDSIYLNGQ 3986
>UNIPROTKB|F1LR23 [details] [associations]
symbol:Fat1 "Protein Fat1" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621254 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 Pfam:PF02210 OMA:PYEAFIV IPI:IPI00949323
Ensembl:ENSRNOT00000046467 ArrayExpress:F1LR23 Uniprot:F1LR23
Length = 4589
Score = 159 (61.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 41/153 (26%), Positives = 71/153 (46%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
SS ++Y + + + ++ ++T S ++ Y + DY L + G++ Y F+C
Sbjct: 3838 SSFVKYRLMENENRLEMKLTMRLRTYSSH-AVVMYA---RGTDYSILEIHTGRLQYKFDC 3893
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP +S + DG+WH V + KL +D A G + G+ KTLN+
Sbjct: 3894 GSGPGIVSVQSIQVNDGQWHAVSLEVEGNYAKLVLDEVHTASGTAPGALKTLNLDNYVIF 3953
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
GG T N + + F GC+ ++ N +
Sbjct: 3954 GGHLRQQGTKHGRNTQVANGFRGCMDSIYLNGQ 3986
>UNIPROTKB|G3V9W9 [details] [associations]
symbol:Fat1 "RCG59113" species:10116 "Rattus norvegicus"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0007015 "actin
filament organization" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0007163 "establishment or maintenance
of cell polarity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030175
"filopodium" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621254 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156 Pfam:PF02210
EMBL:CH473995 Ensembl:ENSRNOT00000067486 Uniprot:G3V9W9
Length = 4589
Score = 159 (61.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 41/153 (26%), Positives = 71/153 (46%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
SS ++Y + + + ++ ++T S ++ Y + DY L + G++ Y F+C
Sbjct: 3838 SSFVKYRLMENENRLEMKLTMRLRTYSSH-AVVMYA---RGTDYSILEIHTGRLQYKFDC 3893
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP +S + DG+WH V + KL +D A G + G+ KTLN+
Sbjct: 3894 GSGPGIVSVQSIQVNDGQWHAVSLEVEGNYAKLVLDEVHTASGTAPGALKTLNLDNYVIF 3953
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
GG T N + + F GC+ ++ N +
Sbjct: 3954 GGHLRQQGTKHGRNTQVANGFRGCMDSIYLNGQ 3986
>UNIPROTKB|Q5T1H1 [details] [associations]
symbol:EYS "Protein eyes shut homolog" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0007601 GO:GO:0005509 GO:GO:0050896 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 CTD:346007 EMBL:FM209056 EMBL:FJ416331
EMBL:AY358133 EMBL:AL050329 EMBL:AL078597 EMBL:AL109612
EMBL:AL132767 EMBL:AL365217 EMBL:AL589916 EMBL:AL109922
EMBL:AL137007 EMBL:AL450324 EMBL:AL450394 EMBL:AL133322
EMBL:AL353669 EMBL:AL354913 EMBL:AL354719 EMBL:AL590546
EMBL:AL590784 EMBL:AL353153 EMBL:AL355357 EMBL:AL356454
EMBL:AL357375 EMBL:AL450319 EMBL:AL603767 EMBL:BC133011
EMBL:BC133013 IPI:IPI00375230 IPI:IPI00887249 IPI:IPI00923621
RefSeq:NP_001136272.1 RefSeq:NP_001136273.1 RefSeq:NP_938024.1
UniGene:Hs.25067 HSSP:P00743 ProteinModelPortal:Q5T1H1
IntAct:Q5T1H1 STRING:Q5T1H1 PhosphoSite:Q5T1H1 DMDM:226707571
PaxDb:Q5T1H1 PRIDE:Q5T1H1 Ensembl:ENST00000342421
Ensembl:ENST00000370616 Ensembl:ENST00000370618
Ensembl:ENST00000370621 Ensembl:ENST00000503581 GeneID:346007
KEGG:hsa:346007 UCSC:uc003per.1 UCSC:uc011dxt.1 UCSC:uc011dxu.1
GeneCards:GC06M064430 H-InvDB:HIX0025090 HGNC:HGNC:21555
HPA:HPA027103 MIM:602772 MIM:612424 neXtProt:NX_Q5T1H1
PharmGKB:PA164719488 InParanoid:A8MVE7 OMA:EITHAND
GenomeRNAi:346007 NextBio:98921 ArrayExpress:Q5T1H1 Bgee:Q5T1H1
Genevestigator:Q5T1H1 Uniprot:Q5T1H1
Length = 3165
Score = 134 (52.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 46/166 (27%), Positives = 77/166 (46%)
Query: 13 SRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKH----IDYVALYVKDGQIHYS 68
SRI I+ ++ F + ++ Q+ +IF+ H D++A+ + +G + YS
Sbjct: 2433 SRIS--DISFHYEFHLKFQLANNHSALQNNLIFFTGQKGHGLNGDDFLAVGLLNGSVVYS 2490
Query: 69 FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQ----VVAEGESKGSSKTLN 124
+N GSG ++ S + L L HTV + G LK+D ++A G G LN
Sbjct: 2491 YNLGSGIASIRS-EPLNLSLGVHTVHLGKFFQEGWLKVDDHKNKSIIAPGRLVG----LN 2545
Query: 125 IFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKH 170
+F FY+GG T L+ + F GC+ L+ + +D H
Sbjct: 2546 VFSQFYVGGYSEYTPDLLPNGADFKNGFQGCIFTLQVRTE--KDGH 2589
Score = 133 (51.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 47/164 (28%), Positives = 75/164 (45%)
Query: 41 DGIIFYVAD---VKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE-WHTVEFS 96
DGI+FY A + D++ + + + + +N G + L + K+ ++G WH ++
Sbjct: 2751 DGILFYAAQHLKAQSGDFLCISLVNSSVQLRYNLGDRTIILETLQKVTINGSTWHIIKAG 2810
Query: 97 RQQLSGKLKIDG-QVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDT--FV 153
R G L +DG V + +K SS N FY+GGV ++ LV N+ F
Sbjct: 2811 RVGAEGYLDLDGINVTEKASTKMSSLDTNT--DFYIGGV--SSLNLVNPMAIENEPVGFQ 2866
Query: 154 GCLRNLKSNNKLVQ----DKHTSSGVIPCSDKTESGVFFYNSGG 193
GC+R + NN+ +Q S V C D T G +GG
Sbjct: 2867 GCIRQVIINNQELQLTEFGAKGGSNVGDC-DGTACGYNTCRNGG 2909
Score = 74 (31.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 30/152 (19%), Positives = 71/152 (46%)
Query: 153 VGCLRNLKSNNKL-VQDKHTSSGVIP--------CSDKTESGVFFYNSGGYVKGVE-QFR 202
V CL NL + L + D+ S + C +KT + Y+K ++ +R
Sbjct: 2935 VSCLNNLCLHQSLCIPDQSFSYSCLCTLGWVGRYCENKTSFSTAKFMGNSYIKYIDPNYR 2994
Query: 203 VGREME---LKMDVKPRNISGLL----LSVHSKKDYFILQMIDGSVKATVDNGKGPISAI 255
+ R ++ + ++ GL+ ++ + + D+ + + + ++K V+ G+ IS
Sbjct: 2995 M-RNLQFTTISLNFSTTKTEGLIVWMGIAQNEENDFLAIGLHNQTLKIAVNLGER-ISVP 3052
Query: 256 YTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS 287
+ ++ F C+ +WH +V I+ + +I +++
Sbjct: 3053 MSYNNGTFCCN-KWHHVVVIQNQTLIKAYINN 3083
Score = 60 (26.2 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 29/125 (23%), Positives = 51/125 (40%)
Query: 201 FRVGREMELKMDVKPRNISGLLL--SVHSKK---DYFILQMIDGSVKATVDNGKGPISAI 255
F V ++ +++ +P G+L + H K D+ + +++ SV+ + G I I
Sbjct: 2733 FHVRKKTHIQLQFQPLAADGILFYAAQHLKAQSGDFLCISLVNSSVQLRYNLGDRTI--I 2790
Query: 256 YTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMT-TDKPGLGPPGSSETDTNNAVFIGGH 314
WH I A + + +D + T+K S DTN +IGG
Sbjct: 2791 LETLQKVTINGSTWHIIKAGRVGAEGYLDLDGINVTEKASTK---MSSLDTNTDFYIGGV 2847
Query: 315 PFLSL 319
L+L
Sbjct: 2848 SSLNL 2852
>UNIPROTKB|G3MXZ5 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR017981 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 PRINTS:PR00249 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 SMART:SM00008 SMART:SM00179
SMART:SM00181 SMART:SM00208 SMART:SM00303 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0004930 GO:GO:0007218
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
InterPro:IPR022624 Pfam:PF12003 GeneTree:ENSGT00700000104170
Pfam:PF02210 EMBL:DAAA02007576 Ensembl:ENSBTAT00000063317
Uniprot:G3MXZ5
Length = 1482
Score = 102 (41.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 112 AEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ--D 168
A+G GS K+L++ GP LGGVP L S VR FVGC+RNL+ +++ V D
Sbjct: 371 AQGTQGGSKKSLDLTGPLLLGGVPDLPESFPVRTR-----QFVGCIRNLQVDSRHVDMAD 425
Query: 169 KHTSSGVIP-CSDK 181
++G +P C K
Sbjct: 426 FIANNGTMPGCPAK 439
Score = 101 (40.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 20 ITGR-FKNKFDFSIDIK-TTSEQDGIIFYVA--DVKHIDYVALYVKDGQIHYSFNCGSGP 75
IT R + +F F++ + T E+DG++ Y + KH D+VAL V Q+ +F+ G
Sbjct: 243 ITFRGLRQRFHFTLALSFATKERDGLLLYNGRFNEKH-DFVALEVIQEQVQLTFSAGEST 301
Query: 76 MALSSG-DKLILDGEWHTVE 94
+S + DG+WHTV+
Sbjct: 302 TTVSPFVPGGVSDGQWHTVQ 321
>MGI|MGI:1914047 [details] [associations]
symbol:Cntnap2 "contactin associated protein-like 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=TAS] [GO:0007610 "behavior" evidence=ISO]
[GO:0008038 "neuron recognition" evidence=TAS] [GO:0008076
"voltage-gated potassium channel complex" evidence=ISO;IDA]
[GO:0009986 "cell surface" evidence=ISO] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030673 "axolemma"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0044224 "juxtaparanode region of axon"
evidence=IDA] [GO:0045163 "clustering of voltage-gated potassium
channels" evidence=IMP] [GO:0071205 "protein localization to
juxtaparanode region of axon" evidence=IMP] [GO:0071625
"vocalization behavior" evidence=ISO] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00008 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 MGI:MGI:1914047 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0005794 GO:GO:0007165 GO:GO:0009986 GO:GO:0030425
GO:GO:0043204 GO:GO:0007155 GO:GO:0030673 GO:GO:0019899
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0031175 GO:GO:0005769 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0008038 Pfam:PF02210
InterPro:IPR003585 SMART:SM00294 HOVERGEN:HBG057718 GO:GO:0044224
GO:GO:0045163 eggNOG:NOG291100 HOGENOM:HOG000230964
GeneTree:ENSGT00560000076804 CTD:26047 KO:K07380 OrthoDB:EOG4RV2QH
ChiTaRS:CNTNAP2 GO:GO:0021761 GO:GO:0071205 EMBL:AK017341
EMBL:AK013139 EMBL:AK129232 EMBL:BC029826 EMBL:BC064467
IPI:IPI00420554 IPI:IPI00467267 RefSeq:NP_001004357.2
RefSeq:NP_080047.1 UniGene:Mm.440084 ProteinModelPortal:Q9CPW0
SMR:Q9CPW0 STRING:Q9CPW0 PhosphoSite:Q9CPW0 PaxDb:Q9CPW0
PRIDE:Q9CPW0 Ensembl:ENSMUST00000060839 GeneID:66797 KEGG:mmu:66797
UCSC:uc009bst.2 InParanoid:Q9CPW0 NextBio:322675 Bgee:Q9CPW0
CleanEx:MM_CNTNAP2 Genevestigator:Q9CPW0
GermOnline:ENSMUSG00000039419 Uniprot:Q9CPW0
Length = 1332
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 75/315 (23%), Positives = 132/315 (41%)
Query: 23 RFKNK----FDFSIDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS---G 74
RF+NK I +K TSE +G++ + + + DY+ L +K ++ S N GS G
Sbjct: 199 RFRNKKMKTLKDVIALKFKTSESEGVLLH-GEGQQGDYITLELKKAKLVLSLNLGSNQLG 257
Query: 75 PM----ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFY 130
P+ +++SG L+ D WH+V RQ S L +D + + + G L++
Sbjct: 258 PIYGHTSVTSGS-LLDDHHWHSVLIERQGRSINLTLD-RSMQHFRTNGEFDYLDLDYEIT 315
Query: 131 LGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVIP---------CSDK 181
GG+P + + + F GC+ ++ N + D + P C +
Sbjct: 316 FGGIPFSG----KPSSSNRKNFKGCMESINYNGVNITDLARRKKLGPSNMGNLSFSCVEP 371
Query: 182 TESGVFFYNSGGYVKGVEQFRVGREM-ELKMDVKPRNISGLLLSVHSKKDY--FILQMID 238
VFF N+ Y++ V R+ +++ + + N SGLLL H + + +++
Sbjct: 372 YTVPVFF-NATSYLE-VPG-RLNQDLFSVSFQFRTWNPSGLLLFSHFADNLGNVEIDLVE 428
Query: 239 GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPP 298
V ++N + S I S DGQWH + + +N + +D P
Sbjct: 429 SKVGVHINNTQTKTSQIDISSGSGLN-DGQWHEVRFLAKENFAVLTIDGDEASAVRTNSP 487
Query: 299 GSSETDTNNAVFIGG 313
+ T F GG
Sbjct: 488 --LQVKTGEKYFFGG 500
Score = 89 (36.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 38/154 (24%), Positives = 71/154 (46%)
Query: 17 YPTITGRF-KNKFDFSIDIKTTSEQDGIIF-YVAD-VKHIDYVALYVKDGQIHYS-FNCG 72
Y + GR ++ F S +T + ++F + AD + +++ + K G +H +
Sbjct: 383 YLEVPGRLNQDLFSVSFQFRTWNPSGLLLFSHFADNLGNVEIDLVESKVG-VHINNTQTK 441
Query: 73 SGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLG 132
+ + +SSG L DG+WH V F ++ L IDG A S + ++ G
Sbjct: 442 TSQIDISSGSGLN-DGQWHEVRFLAKENFAVLTIDGDE-ASAVRTNSPLQVKTGEKYFFG 499
Query: 133 GVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV 166
G LN + L +F GC++ ++ +++LV
Sbjct: 500 GF-LNHMNNASYS-ALQPSFQGCMQLIQVDDQLV 531
Score = 82 (33.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 31/145 (21%), Positives = 55/145 (37%)
Query: 172 SSGVIPCS-DKTE-SGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK 229
S G + C D+ + F N Y+ F+ ++ K G+ L
Sbjct: 785 SVGPLRCQGDRNYWNAASFPNPSSYLH-FSTFQGETSADISFYFKTLIPRGVFLENLGNT 843
Query: 230 DYFILQMIDGS-VKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSM 288
D+ L++ + V + D G GP+ + P D QWH + A + S+ VD +
Sbjct: 844 DFIKLELKSATEVSFSFDVGNGPVEIVVRSPSP--LNDDQWHRVTAERNVKQASLQVDRL 901
Query: 289 TTDKPGLGPPGSSETDTNNAVFIGG 313
G + + + +F+GG
Sbjct: 902 PQQIRKAPTEGHTRLELYSQLFVGG 926
>UNIPROTKB|F1MJQ2 [details] [associations]
symbol:CNTNAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0033270 "paranode region of axon"
evidence=IEA] [GO:0030913 "paranodal junction assembly"
evidence=IEA] [GO:0008088 "axon cargo transport" evidence=IEA]
[GO:0008076 "voltage-gated potassium channel complex" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0002175
"protein localization to paranode region of axon" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0007010 GO:GO:0008088
GO:GO:0050885 GO:GO:0007155 GO:GO:0048812 GO:GO:0008076
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SUPFAM:SSF56496 PROSITE:PS51406 GO:GO:0033270
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0030913
GO:GO:0002175 GO:GO:0050884 CTD:8506 KO:K07379 OMA:RHDLHYH
GeneTree:ENSGT00560000076804 EMBL:DAAA02049191 EMBL:DAAA02049192
IPI:IPI01001593 RefSeq:NP_001193824.1 UniGene:Bt.46498
Ensembl:ENSBTAT00000025424 GeneID:540997 KEGG:bta:540997
NextBio:20878954 Uniprot:F1MJQ2
Length = 1388
Score = 152 (58.6 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 77/322 (23%), Positives = 135/322 (41%)
Query: 15 IEYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
I Y G ++ +D F+ KT E+DG++ + A+ DYV L ++ + + GS
Sbjct: 183 ISYRFPRGVSRSLWDVFAFSFKT-EEKDGLLLH-AEGAQGDYVTLELQGAHLLLHMSLGS 240
Query: 74 GPM-------ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIF 126
P+ +S+G ++ D WH V R L +DG V G + LN+
Sbjct: 241 SPIQPRPGHTTVSAGG-VLNDQHWHYVRVDRFGREANLTLDGYV-QRFVLNGDFERLNLD 298
Query: 127 GPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQD----KH---TSSGVIP-- 177
++GG+ + NL F GC+ N+ N + D +H T G +
Sbjct: 299 NEMFIGGLV----GAAQKNLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFR 354
Query: 178 CSDKTESGVFFYNSGGYVKGVEQF-RVGREMELKMDVKPRNISGLLL--SVHSKKDYFIL 234
C D + F +V+ V F R GR + + + +++GLLL S+ + L
Sbjct: 355 CLDPVPHPINFGGPHNFVQ-VPGFPRRGR-LAVSFRFRTWDLTGLLLFSSLGDGLGHVEL 412
Query: 235 QMIDGSVKATV-DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKP 293
+ +G V +V G+ + + + DG WH + + +N +++D + +
Sbjct: 413 MLSEGQVNVSVVQTGRKKLQF----AAGFRLNDGFWHEVNFVAQENHAVISIDDVEGAEV 468
Query: 294 GLGPPGSSETDTNNAVFIGGHP 315
+ P T T+ F GG P
Sbjct: 469 RVSYPLLIRTGTS--YFFGGCP 488
>FB|FBgn0038975 [details] [associations]
symbol:Nrx-1 "Neurexin 1" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=IDA;NAS]
[GO:0007268 "synaptic transmission" evidence=IDA] [GO:0050808
"synapse organization" evidence=IDA] [GO:0008306 "associative
learning" evidence=IDA] [GO:0007416 "synapse assembly"
evidence=IDA] [GO:0031594 "neuromuscular junction" evidence=IDA]
InterPro:IPR000742 Pfam:PF00008 PROSITE:PS50026 SMART:SM00181
EMBL:AE014297 GO:GO:0005886 GO:GO:0007268 GO:GO:0031594
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0008306 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 OMA:NAYACEC CTD:42646 EMBL:BT023898
RefSeq:NP_001163687.1 UniGene:Dm.1980 STRING:Q3KN41
EnsemblMetazoa:FBtr0301485 GeneID:42646 KEGG:dme:Dmel_CG7050
FlyBase:FBgn0038975 GenomeRNAi:42646 NextBio:829856 Uniprot:Q3KN41
Length = 1840
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 41/152 (26%), Positives = 74/152 (48%)
Query: 31 SIDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLIL-DG 88
SID + T E +G++ + ++ D+VA+ + +G IHY+F+ G GP+ + ++ + D
Sbjct: 1005 SIDFRFKTVEPNGLLVFNGGRRN-DFVAVELVNGHIHYTFDLGDGPVTMRDKSRIHMNDN 1063
Query: 89 EWHTVEFSRQ-QLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLG 147
WH V R + L +D + G++ L + G Y+GGV + + + ++
Sbjct: 1064 RWHQVSIRRPGPKTHTLTVDDSFEIISLT-GNNMHLELAGILYIGGVFKDMYSKLPASIS 1122
Query: 148 LNDTFVGCLRNLKSNNKLVQDKHTSSGVIPCS 179
F GCL +L + TS V+P S
Sbjct: 1123 SRSGFEGCLASLDLGD--ASPSLTSDAVVPSS 1152
Score = 134 (52.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 43/146 (29%), Positives = 66/146 (45%)
Query: 31 SIDIK-TTSEQDGIIFYVAD-----VKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKL 84
SI K T E +GII K+ +A+ + +G I+ + GSG + + +
Sbjct: 577 SISFKFRTKEPNGIIVLATGSKQPRAKNPVLIAIELLNGHIYIHLDLGSGASKVRASRRR 636
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGV-PLNTSTLVR 143
+ DG+WH + R K+ +DG V + + G L + G YLGGV P S
Sbjct: 637 VDDGDWHDLILRRNGRDAKVSVDG-VWNDFRTPGDGTILELDGHMYLGGVGPAYNSVSWP 695
Query: 144 GNLG---LNDTFVGCLRNLKSNNKLV 166
+ L FVGCLR+L + K +
Sbjct: 696 AAIWTATLRQGFVGCLRDLVLSGKAI 721
Score = 122 (48.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 36/137 (26%), Positives = 63/137 (45%)
Query: 31 SIDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLILDGE 89
+++++ +EQ +G++ Y D D+ L + +G + +N G G ++ G +L DG
Sbjct: 127 TLELEFKTEQPNGLVLYTDDGGTYDFFELKLVEGALRLRYNLGGGAQIITVGRELH-DGH 185
Query: 90 WHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGP---FYLGGVP----LNTSTLV 142
WH V+ R L +DG V + +KG F Y+GG+P + L
Sbjct: 186 WHKVQVLRNDEQTSLIVDG-VSQQRSTKGKEFQFGKFASNSDVYVGGMPNWYSSKLALLA 244
Query: 143 RGNLGLNDTFVGCLRNL 159
++ F G +RNL
Sbjct: 245 LPSVIFEPRFRGAIRNL 261
Score = 73 (30.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 36/144 (25%), Positives = 56/144 (38%)
Query: 179 SDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMID 238
S+ T G F + G E V + + + R +GLL DY L + D
Sbjct: 353 SEATFRGTQFLSYDLGQTGAEPI-VSAQDAISFYFRTRQPNGLLFYTGHGTDYLNLALRD 411
Query: 239 GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI-VAIKTKNVISVA--------VDSMT 289
G V T+ G PS F D QWH + V + + + S+ VD +
Sbjct: 412 GGVSLTMGLANGKQEMHIKPSKVRFD-DHQWHKVTVHRRIQEISSITSFCRLVTVVDDVY 470
Query: 290 TDKPGLGPPGSSETDTNNAVFIGG 313
TD + G +++ V++GG
Sbjct: 471 TDHSHIA--GKFTMLSSSRVYVGG 492
Score = 69 (29.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 31/162 (19%), Positives = 64/162 (39%)
Query: 160 KSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNIS 219
KS +KL+Q P D + F V + + G++ + + + +
Sbjct: 531 KSGSKLIQVAGNLEYQCPSGDPQDPVTFTTRESHLV--LPPWETGKQSSISFKFRTKEPN 588
Query: 220 GLL-LSVHSKKD------YFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI 272
G++ L+ SK+ +++++G + +D G G A + DG WH +
Sbjct: 589 GIIVLATGSKQPRAKNPVLIAIELLNGHIYIHLDLGSG---ASKVRASRRRVDDGDWHDL 645
Query: 273 VAIKTKNVISVAVDSMTTDKPGLGPPGSSET-DTNNAVFIGG 313
+ + V+VD + D PG + + +++GG
Sbjct: 646 ILRRNGRDAKVSVDGVWND---FRTPGDGTILELDGHMYLGG 684
Score = 68 (29.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 18/86 (20%), Positives = 39/86 (45%)
Query: 188 FYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFI-LQMIDGSVKATVD 246
F + YV G+ + + + K +GLL+ +++ F+ +++++G + T D
Sbjct: 986 FRSKHSYV-GLAMLKAYNSISIDFRFKTVEPNGLLVFNGGRRNDFVAVELVNGHIHYTFD 1044
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTI 272
G GP++ D +WH +
Sbjct: 1045 LGDGPVTM--RDKSRIHMNDNRWHQV 1068
Score = 47 (21.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 28/111 (25%), Positives = 44/111 (39%)
Query: 208 ELKMDVKPRNISGLLL--SVHSKK-DYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFF 264
EL + K +GLLL S S D + ++ G V+A+V + + S
Sbjct: 809 ELVIRFKTSRPAGLLLLTSAESNSPDRLEIALVAGRVRASVRLSDREKNLLAGQS---VL 865
Query: 265 CDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPP--GSSETDTNNAVFIGG 313
D WHTI + + + + VD + L G T +V +GG
Sbjct: 866 NDNNWHTIRFSRRASNLRLQVDGAPPVRGMLSETILGRHSTMEIRSVHLGG 916
>UNIPROTKB|P07224 [details] [associations]
symbol:PROS1 "Vitamin K-dependent protein S" species:9913
"Bos taurus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0042730 "fibrinolysis" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000294 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00594
Pfam:PF07645 PRINTS:PR00001 PROSITE:PS00011 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50998 SMART:SM00069 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005576 GO:GO:0007596
GO:GO:0042730 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
Gene3D:4.10.740.10 InterPro:IPR017857 SUPFAM:SSF57630
HOGENOM:HOG000065758 HOVERGEN:HBG051702
GeneTree:ENSGT00530000063339 EMBL:M13044 EMBL:X12891
IPI:IPI00704150 PIR:A24759 RefSeq:NP_776863.1 UniGene:Bt.48894
ProteinModelPortal:P07224 SMR:P07224 STRING:P07224 PRIDE:P07224
Ensembl:ENSBTAT00000032377 GeneID:282006 KEGG:bta:282006 CTD:5627
eggNOG:NOG124763 InParanoid:P07224 KO:K03908 OMA:WNMVSVE
OrthoDB:EOG4PRSQB NextBio:20805874 PMAP-CutDB:P07224 Uniprot:P07224
Length = 675
Score = 148 (57.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 58/242 (23%), Positives = 104/242 (42%)
Query: 21 TGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSS 80
T RF +FDF T + +G+I Y H + + +++G+I F +++
Sbjct: 320 TTRFSAEFDFR-----TYDSEGVILYAESSDHSAWFLIALREGKIEIQFK-NEKTTKMTT 373
Query: 81 GDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSS-KTLNIF--GPFYLGGVPLN 137
G K+I DG WH V + S +KI + V GS K N F Y GVP
Sbjct: 374 GGKVINDGLWHMVSVEELEQSISVKIAKEAVMNINKPGSLFKPTNGFLETKVYFAGVPRK 433
Query: 138 T-STLVRGNLGLNDTFVGCLR--NLKSNN-----KLVQDKHTSSGVIPCSDKTESGVFFY 189
+ L+R +N GC+R NL + +++Q+K C E G ++
Sbjct: 434 MENALIRP---INPRLDGCIRGWNLMNQGTSGVKEIIQEKQNKH----CLVNVEKGSYYP 486
Query: 190 NSGGYVKGV----EQFRVGREMELKMDVKPRNISGLLLSVHSKKDY-FILQMIDGSVKAT 244
+G + E ++ + ++++P +G++L++ S F L ++D + +
Sbjct: 487 GTGVAQFSINYKNESNPEAWQINVSLNIRPSAGTGVMLALVSDNTVPFALSLVDSATEKL 546
Query: 245 VD 246
D
Sbjct: 547 QD 548
>UNIPROTKB|Q90Z43 [details] [associations]
symbol:SLIT3 "Slit3 protein" species:9031 "Gallus gallus"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IEP] [GO:0060173 "limb development" evidence=IEP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0007411 GO:GO:0008285 GO:GO:0005615
GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0060173 GO:GO:0048839
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 HSSP:P00740 GO:GO:0070100 Pfam:PF12661 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AADN02035923
EMBL:AF364046 IPI:IPI00821967 UniGene:Gga.2000 STRING:Q90Z43
Ensembl:ENSGALT00000041139 InParanoid:Q90Z43 Uniprot:Q90Z43
Length = 792
Score = 148 (57.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 49/174 (28%), Positives = 88/174 (50%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
K S +E P+ + + + + S+ + T + +GI+ Y D D +AL + G + ++
Sbjct: 433 KDSYVELPS--AKIRPQANISLQV-ATDKDNGILLYKGDN---DPLALELYQGHVRLIYD 486
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGE-SKGSSKTLNIFGP 128
+ P + + DG++H+VE + L +D G + G+ K SS +LN P
Sbjct: 487 TLNSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGTPKSLGKLQKQSSVSLNT--P 544
Query: 129 FYLGGVPLNT--STLVRGNLGLNDTFVGCLRNLKSNNKLVQDK---HTSSGVIP 177
Y+GG+P +T S+L +G + F GC+ +++ NN+L K S GV+P
Sbjct: 545 LYIGGIPTSTGLSSLRQGADKTPNGFHGCIHDVRINNELQDFKDLPQQSIGVLP 598
>UNIPROTKB|E1C6L4 [details] [associations]
symbol:PROS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR000294
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00594 Pfam:PF07645 PRINTS:PR00001
PROSITE:PS00011 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50998
SMART:SM00069 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
Gene3D:4.10.740.10 InterPro:IPR017857 SUPFAM:SSF57630
GeneTree:ENSGT00530000063339 CTD:5627 KO:K03908 OMA:WNMVSVE
EMBL:AADN02032706 IPI:IPI00584625 RefSeq:XP_416641.2
UniGene:Gga.54053 ProteinModelPortal:E1C6L4
Ensembl:ENSGALT00000024855 GeneID:418430 KEGG:gga:418430
NextBio:20821614 Uniprot:E1C6L4
Length = 665
Score = 147 (56.8 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 76/328 (23%), Positives = 139/328 (42%)
Query: 14 RIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
+ + P +T RF +FDF T + +GII Y + ++ L ++DG+I F
Sbjct: 313 KFKLPNVT-RFSAEFDFR-----TYDSEGIILYAESFDNTAWILLALRDGKIEIQFKNEF 366
Query: 74 GPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSS-KTLNIF--GPFY 130
G ++SG K I DG WH + + S +KI + V S G+ K + F Y
Sbjct: 367 GTK-VTSGGKAINDGLWHIISVEELENSISVKIAKEAVMNINSPGTLFKQSHGFLETKVY 425
Query: 131 LGGVPLNTS-TLVRGNLGLNDTFVGCLR--NLKSNN-----KLVQDKHTSSGVIPCSDKT 182
+ G+P TL++ +N GC+R NL + +++Q+K + C
Sbjct: 426 IAGLPDKVGDTLIKQ---INPRLDGCIRAWNLMNQGHSGVKEVIQEKQSKH----CLVTV 478
Query: 183 ESGVFFYNSG--GYVKGVEQFRVGRE--MELKMDVKPRNISGLLLSVHSKKDY-FILQMI 237
E G F+ +G + + + + M ++P +G++ ++ S + L ++
Sbjct: 479 ERGSFYPGTGMAQFDINYNNHDSAEDWLINVTMTIRPSTDTGVMFALVSNETVPLALSIV 538
Query: 238 DG--SVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMT--TDKP 293
D S + G I+ S C + + + TK + ++VDS T ++
Sbjct: 539 DSNSSDSQEIIVTIGNITVARLESKK--LCTPRKVQVGLLVTKQQLQLSVDSRTDQSNSE 596
Query: 294 GLGPPGSSETDTNNAVFIGGHPFLSLSS 321
L + TN ++GG P + L +
Sbjct: 597 QLSVLHQAMM-TNVVTYLGGLPDVPLGA 623
>RGD|1559812 [details] [associations]
symbol:Cntnap5a "contactin associated protein-like 5A"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 RGD:1559812 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0007165 GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 OrthoDB:EOG441Q9K CTD:636808
EMBL:AABR03084638 EMBL:AABR03084763 EMBL:AABR03084792
EMBL:AABR03084826 EMBL:AABR03084916 EMBL:AABR03085048
EMBL:AABR03085225 EMBL:AABR03085340 EMBL:AABR03085455
EMBL:AABR03085761 EMBL:AABR03086666 EMBL:BN000868 IPI:IPI00366737
RefSeq:NP_001041330.1 UniGene:Rn.232340 ProteinModelPortal:Q0V8T6
PRIDE:Q0V8T6 GeneID:297832 KEGG:rno:297832 UCSC:RGD:1559812
NextBio:642735 ArrayExpress:Q0V8T6 Genevestigator:Q0V8T6
Uniprot:Q0V8T6
Length = 1305
Score = 149 (57.5 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 77/307 (25%), Positives = 131/307 (42%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLIL---- 86
I +K S Q DG++F+ + + D+V L ++ G++ N LSS L++
Sbjct: 205 ISLKFKSMQGDGVLFH-GEGQRGDHVTLELQKGRLALYLNLDDSKARLSSTVPLVIMGSL 263
Query: 87 --DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS--TLV 142
D WH+V R +D ++KG + L+I GG+P+ + T V
Sbjct: 264 LDDQHWHSVLLERVGKQANFTVDMNT-QHFQTKGETDALDIDYELSFGGIPVPSKPGTFV 322
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQD-----KHTS-SGVIP--CSDKTESGVFFYNS-GG 193
+ N F GC+ NL N + D KH SG + CS+ + F NS
Sbjct: 323 KKN------FHGCMENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQIVPITFVNSRSS 376
Query: 194 YVK--GVEQFRVGREMELKMDVKPRNISGLLLSVH-SKKDYFILQMIDG-SVKATVDNGK 249
Y+ G Q G + + + N GLLLS S+ +L +++G +++ +
Sbjct: 377 YLMLPGTPQID-G--LSVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKVA 433
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGS-SETDTNNA 308
G + I T S DG WH++ +N +++ +D+ D P S + + +
Sbjct: 434 GHGTEIKTGSG---LNDGLWHSVSINARRNRVTLTLDN---DAASPAPETSRKQIYSGKS 487
Query: 309 VFIGGHP 315
+ GG P
Sbjct: 488 YYFGGCP 494
>UNIPROTKB|F1LRD8 [details] [associations]
symbol:Cntnap5a "Contactin-associated protein-like 5-1"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 RGD:1559812 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210 IPI:IPI00366737
Ensembl:ENSRNOT00000050329 ArrayExpress:F1LRD8 Uniprot:F1LRD8
Length = 1305
Score = 149 (57.5 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 77/307 (25%), Positives = 131/307 (42%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLIL---- 86
I +K S Q DG++F+ + + D+V L ++ G++ N LSS L++
Sbjct: 205 ISLKFKSMQGDGVLFH-GEGQRGDHVTLELQKGRLALYLNLDDSKARLSSTVPLVIMGSL 263
Query: 87 --DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS--TLV 142
D WH+V R +D ++KG + L+I GG+P+ + T V
Sbjct: 264 LDDQHWHSVLLERVGKQANFTVDMNT-QHFQTKGETDALDIDYELSFGGIPVPSKPGTFV 322
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQD-----KHTS-SGVIP--CSDKTESGVFFYNS-GG 193
+ N F GC+ NL N + D KH SG + CS+ + F NS
Sbjct: 323 KKN------FHGCMENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQIVPITFVNSRSS 376
Query: 194 YVK--GVEQFRVGREMELKMDVKPRNISGLLLSVH-SKKDYFILQMIDG-SVKATVDNGK 249
Y+ G Q G + + + N GLLLS S+ +L +++G +++ +
Sbjct: 377 YLMLPGTPQID-G--LSVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKVA 433
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGS-SETDTNNA 308
G + I T S DG WH++ +N +++ +D+ D P S + + +
Sbjct: 434 GHGTEIKTGSG---LNDGLWHSVSINARRNRVTLTLDN---DAASPAPETSRKQIYSGKS 487
Query: 309 VFIGGHP 315
+ GG P
Sbjct: 488 YYFGGCP 494
>UNIPROTKB|F1NL15 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
Pfam:PF01463 GeneTree:ENSGT00700000104083 EMBL:AADN02035923
IPI:IPI00818500 Ensembl:ENSGALT00000041140 ArrayExpress:F1NL15
Uniprot:F1NL15
Length = 1094
Score = 148 (57.2 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 49/174 (28%), Positives = 88/174 (50%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
K S +E P+ + + + + S+ + T + +GI+ Y D D +AL + G + ++
Sbjct: 735 KDSYVELPS--AKIRPQANISLQV-ATDKDNGILLYKGDN---DPLALELYQGHVRLIYD 788
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGE-SKGSSKTLNIFGP 128
+ P + + DG++H+VE + L +D G + G+ K SS +LN P
Sbjct: 789 TLNSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGTPKSLGKLQKQSSVSLNT--P 846
Query: 129 FYLGGVPLNT--STLVRGNLGLNDTFVGCLRNLKSNNKLVQDK---HTSSGVIP 177
Y+GG+P +T S+L +G + F GC+ +++ NN+L K S GV+P
Sbjct: 847 LYIGGIPTSTGLSSLRQGADKTPNGFHGCIHDVRINNELQDFKDLPQQSIGVLP 900
>UNIPROTKB|F5H107 [details] [associations]
symbol:CNTNAP4 "Contactin-associated protein-like 4"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 EMBL:AC010528 EMBL:AC106741
IPI:IPI00644276 HGNC:HGNC:18747 ProteinModelPortal:F5H107
SMR:F5H107 Ensembl:ENST00000377504 ArrayExpress:F5H107 Bgee:F5H107
Uniprot:F5H107
Length = 1259
Score = 120 (47.3 bits), Expect = 0.00086, P = 0.00086
Identities = 48/157 (30%), Positives = 67/157 (42%)
Query: 178 CSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMI 237
CS V F +S Y+ + F E+ + N +GLLL + LQ+I
Sbjct: 315 CSQPQSMPVTFLSSRSYL-ALPDFSGEEEVSATFQFRTWNKAGLLL-------FSELQLI 366
Query: 238 DGSVKATVDNGKGPISAIYTP----SD---PYFFCDGQWHTIVAIKTKNVISVAVDS-MT 289
G + + +GK S +Y P SD DGQWH++ KN +SVAVD M
Sbjct: 367 SGGILLFLSDGKLK-SNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMA 425
Query: 290 TDKPGLGPPGSSETDTNNAVFIGGHPFLSLSSKKSGP 326
+ P LGP + + + GG P S SK P
Sbjct: 426 SAAPLLGP---EQIYSGGTYYFGGCPDKSFGSKCKSP 459
Score = 114 (45.2 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 37/160 (23%), Positives = 81/160 (50%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDY-VALYVKDGQIHYS 68
S S + P +G + + + +T ++ G++ + ++++ I + L++ DG++ +
Sbjct: 327 SSRSYLALPDFSG--EEEVSATFQFRTWNKA-GLLLF-SELQLISGGILLFLSDGKLKSN 382
Query: 69 -FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+ G P +++G +L DG+WH+V S ++ + +DGQ+ + G + + G
Sbjct: 383 LYQPGKLPSDITAGVELN-DGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYS-GG 440
Query: 128 PFYLGGVPLNT-STLVRGNLGLNDTFVGCLRNLKSNNKLV 166
+Y GG P + + + LG F GC+R + + K+V
Sbjct: 441 TYYFGGCPDKSFGSKCKSPLG---GFQGCMRLISISGKVV 477
Score = 83 (34.3 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 29/111 (26%), Positives = 44/111 (39%)
Query: 208 ELKMDV----KPRNISGLLLSVHSKKDYFILQMIDGSVKA-TVDNGKGPISAIYTPSDPY 262
EL DV K SG+ L D+ +++ +V + D G GP + P
Sbjct: 763 ELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEI--SVQSPT 820
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
F D QWH + + S+ VD +T G N+ +F+GG
Sbjct: 821 HFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGG 871
>UNIPROTKB|F1LPV4 [details] [associations]
symbol:Cntnap1 "Contactin-associated protein 1"
species:10116 "Rattus norvegicus" [GO:0002175 "protein localization
to paranode region of axon" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IEA] [GO:0008088 "axon cargo transport" evidence=IEA]
[GO:0030913 "paranodal junction assembly" evidence=IEA] [GO:0033270
"paranode region of axon" evidence=IEA] [GO:0048812 "neuron
projection morphogenesis" evidence=IEA] [GO:0050884 "neuromuscular
process controlling posture" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 RGD:70902 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0007165 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
OMA:RHDLHYH GeneTree:ENSGT00560000076804 IPI:IPI00208699
Ensembl:ENSRNOT00000027505 ArrayExpress:F1LPV4 Uniprot:F1LPV4
Length = 1324
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 74/321 (23%), Positives = 129/321 (40%)
Query: 15 IEYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
I Y G ++ +D F+ KT E+DG++ + + DYV L ++ + + GS
Sbjct: 127 ISYRFQRGASQSLWDVFAFSFKT-EEKDGLLLHTEGSQG-DYVTLELQGAHLLLHMSLGS 184
Query: 74 GPMALSSGDKLILDG------EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
P+ G + G WH V R L +DG V G + LN+
Sbjct: 185 SPIQPRPGHTTVSAGGVLNDLSWHYVRVDRYGREANLTLDGYV-HRFVLNGDFERLNLEN 243
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNN----KLVQDKH---TSSGVIP--C 178
++GG+ R NL F GC+ N+ N ++ +H T G + C
Sbjct: 244 EIFIGGLV----GAARKNLAYRHNFRGCIENVIYNRINIAEMAVQRHSRITFEGNVAFRC 299
Query: 179 SDKTESGVFFYNSGGYVKGVEQF-RVGREMELKMDVKPRNISGLLL--SVHSKKDYFILQ 235
D + F +V+ V F R GR + + + +++GLLL + + L
Sbjct: 300 LDPVPHPINFGGPHNFVQ-VPGFPRRGR-LAVSFRFRTWDLTGLLLFSRLGDGLGHVELM 357
Query: 236 MIDGSVKATV-DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPG 294
+ +G V ++ G+ + + Y DG WH + + +N +++D + +
Sbjct: 358 LSEGQVNVSIAQTGRKKLQF----AAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVR 413
Query: 295 LGPPGSSETDTNNAVFIGGHP 315
+ P T T+ F GG P
Sbjct: 414 VSYPLLIRTGTS--YFFGGCP 432
>UNIPROTKB|F1NF14 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0070100
Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
OMA:SVDCHGL EMBL:AADN02035923 IPI:IPI00587174
Ensembl:ENSGALT00000002967 ArrayExpress:F1NF14 Uniprot:F1NF14
Length = 1338
Score = 148 (57.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 49/174 (28%), Positives = 88/174 (50%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
K S +E P+ + + + + S+ + T + +GI+ Y D D +AL + G + ++
Sbjct: 979 KDSYVELPS--AKIRPQANISLQV-ATDKDNGILLYKGDN---DPLALELYQGHVRLIYD 1032
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGE-SKGSSKTLNIFGP 128
+ P + + DG++H+VE + L +D G + G+ K SS +LN P
Sbjct: 1033 TLNSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGTPKSLGKLQKQSSVSLNT--P 1090
Query: 129 FYLGGVPLNT--STLVRGNLGLNDTFVGCLRNLKSNNKLVQDK---HTSSGVIP 177
Y+GG+P +T S+L +G + F GC+ +++ NN+L K S GV+P
Sbjct: 1091 LYIGGIPTSTGLSSLRQGADKTPNGFHGCIHDVRINNELQDFKDLPQQSIGVLP 1144
>RGD|70902 [details] [associations]
symbol:Cntnap1 "contactin associated protein 1" species:10116
"Rattus norvegicus" [GO:0002175 "protein localization to paranode
region of axon" evidence=ISO;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007010 "cytoskeleton organization"
evidence=ISO;ISS] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0008076 "voltage-gated potassium channel complex"
evidence=ISO;ISS] [GO:0008088 "axon cargo transport"
evidence=ISO;ISS] [GO:0016021 "integral to membrane"
evidence=IEA;IDA] [GO:0017124 "SH3 domain binding" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0030913 "paranodal junction
assembly" evidence=ISO;ISS;TAS] [GO:0031175 "neuron projection
development" evidence=ISO] [GO:0033270 "paranode region of axon"
evidence=ISO;IDA] [GO:0042552 "myelination" evidence=TAS]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO;ISS]
[GO:0050884 "neuromuscular process controlling posture"
evidence=ISO;ISS] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA;ISO] InterPro:IPR000421 InterPro:IPR000742
Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022
PROSITE:PS50026 SMART:SM00181 SMART:SM00231 RGD:70902
INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165 GO:GO:0007010
GO:GO:0017124 GO:GO:0008088 GO:GO:0007155 GO:GO:0048812
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 Gene3D:3.90.215.10 InterPro:IPR014716
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 GO:GO:0033270
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0030913
GO:GO:0002175 GO:GO:0050884 HOVERGEN:HBG057718 CTD:8506
eggNOG:NOG291100 HOGENOM:HOG000230964 KO:K07379 EMBL:U87224
EMBL:AF000114 IPI:IPI00208699 PIR:T31083 RefSeq:NP_114450.1
UniGene:Rn.88654 ProteinModelPortal:P97846 STRING:P97846
PhosphoSite:P97846 PRIDE:P97846 GeneID:84008 KEGG:rno:84008
UCSC:RGD:70902 InParanoid:P97846 NextBio:616527 ArrayExpress:P97846
Genevestigator:P97846 GermOnline:ENSRNOG00000020277 Uniprot:P97846
Length = 1381
Score = 148 (57.2 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 74/321 (23%), Positives = 129/321 (40%)
Query: 15 IEYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
I Y G ++ +D F+ KT E+DG++ + + DYV L ++ + + GS
Sbjct: 184 ISYRFQRGASQSLWDVFAFSFKT-EEKDGLLLHTEGSQG-DYVTLELQGAHLLLHMSLGS 241
Query: 74 GPMALSSGDKLILDG------EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
P+ G + G WH V R L +DG V G + LN+
Sbjct: 242 SPIQPRPGHTTVSAGGVLNDLSWHYVRVDRYGREANLTLDGYV-HRFVLNGDFERLNLEN 300
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNN----KLVQDKH---TSSGVIP--C 178
++GG+ R NL F GC+ N+ N ++ +H T G + C
Sbjct: 301 EIFIGGLV----GAARKNLAYRHNFRGCIENVIYNRINIAEMAVQRHSRITFEGNVAFRC 356
Query: 179 SDKTESGVFFYNSGGYVKGVEQF-RVGREMELKMDVKPRNISGLLL--SVHSKKDYFILQ 235
D + F +V+ V F R GR + + + +++GLLL + + L
Sbjct: 357 LDPVPHPINFGGPHNFVQ-VPGFPRRGR-LAVSFRFRTWDLTGLLLFSRLGDGLGHVELM 414
Query: 236 MIDGSVKATV-DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPG 294
+ +G V ++ G+ + + Y DG WH + + +N +++D + +
Sbjct: 415 LSEGQVNVSIAQTGRKKLQF----AAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVR 470
Query: 295 LGPPGSSETDTNNAVFIGGHP 315
+ P T T+ F GG P
Sbjct: 471 VSYPLLIRTGTS--YFFGGCP 489
>UNIPROTKB|K7EMM9 [details] [associations]
symbol:CNTNAP1 "Contactin-associated protein 1"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
HGNC:HGNC:8011 EMBL:AC100793 Ensembl:ENST00000591662 Uniprot:K7EMM9
Length = 740
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 76/322 (23%), Positives = 134/322 (41%)
Query: 15 IEYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
I Y G ++ +D F+ KT E+DG++ + A+ DYV L ++ + + GS
Sbjct: 183 ISYRFPRGVSRSLWDVFAFSFKT-EEKDGLLLH-AEGAQGDYVTLELEGAHLLLHMSLGS 240
Query: 74 GPM-------ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIF 126
P+ +S+G ++ D WH V R +DG V G + LN+
Sbjct: 241 SPIQPRPGHTTVSAGG-VLNDQHWHYVRVDRFGRDVNFTLDGYV-QRFILNGDFERLNLD 298
Query: 127 GPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQD----KH---TSSGVIP-- 177
++GG+ R NL F GC+ N+ N + D +H T G +
Sbjct: 299 TEMFIGGLV----GAARKNLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFR 354
Query: 178 CSDKTESGVFFYNSGGYVKGVEQF-RVGREMELKMDVKPRNISGLLL--SVHSKKDYFIL 234
C D + F +V+ V F R GR + + + +++GLLL + + L
Sbjct: 355 CLDPVPHPINFGGPHNFVQ-VPGFPRRGR-LAVSFRFRTWDLTGLLLFSRLGDGLGHVEL 412
Query: 235 QMIDGSVKATV-DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKP 293
+ +G V ++ +G+ + + Y DG WH + + +N +++D + +
Sbjct: 413 TLSEGQVNVSIAQSGRKKLQF----AAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEV 468
Query: 294 GLGPPGSSETDTNNAVFIGGHP 315
+ P T T+ F GG P
Sbjct: 469 RVSYPLLIRTGTS--YFFGGCP 488
>UNIPROTKB|F1PDN4 [details] [associations]
symbol:CNTNAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0050884 "neuromuscular
process controlling posture" evidence=IEA] [GO:0048812 "neuron
projection morphogenesis" evidence=IEA] [GO:0033270 "paranode
region of axon" evidence=IEA] [GO:0030913 "paranodal junction
assembly" evidence=IEA] [GO:0008088 "axon cargo transport"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0002175 "protein localization to paranode region of axon"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0007010
GO:GO:0008088 GO:GO:0050885 GO:GO:0007155 GO:GO:0048812
GO:GO:0008076 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SUPFAM:SSF56496
PROSITE:PS51406 GO:GO:0033270 Pfam:PF02210 InterPro:IPR003585
SMART:SM00294 GO:GO:0030913 GO:GO:0002175 GO:GO:0050884 OMA:RHDLHYH
GeneTree:ENSGT00560000076804 EMBL:AAEX03006444
Ensembl:ENSCAFT00000023588 Uniprot:F1PDN4
Length = 1378
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 75/322 (23%), Positives = 132/322 (40%)
Query: 15 IEYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
I Y G ++ +D F+ KT E+DG++ + V+ DY+ L ++ + + GS
Sbjct: 183 ISYRFPRGVSRSLWDVFAFSFKT-EEKDGLLLHAEGVQG-DYITLELQGAHLLLHMSLGS 240
Query: 74 GPM-------ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIF 126
P+ +S+G ++ D WH V R L +DG V G + LN+
Sbjct: 241 SPIQPRPGHTTVSAGG-VLNDQHWHYVRVDRFGREANLTLDGYV-QRFVLNGDFERLNLD 298
Query: 127 GPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQD----KH---TSSGVIP-- 177
++GG+ + NL F GC+ N+ N + D +H T G +
Sbjct: 299 NEMFIGGLV----GAAQKNLAYRHNFRGCIENIIFNRVNIADLAVRRHSRITFEGKVAFR 354
Query: 178 CSDKTESGVFFYNSGGYVKGVEQF-RVGREMELKMDVKPRNISGLLL--SVHSKKDYFIL 234
C D + F +V+ V F R GR + + +++GLLL + + L
Sbjct: 355 CLDPVPHPINFGGPHNFVQ-VPGFPRRGR-FAVSFRFRTWDLTGLLLFSRLGDGLGHVEL 412
Query: 235 QMIDGSVKATV-DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKP 293
+ +G V ++ G+ + + Y DG WH + +N +++D + +
Sbjct: 413 MLSEGQVNVSIAQTGRKKLQF----AAGYRLNDGFWHEVNFAAQENHAVISIDDVEGAEV 468
Query: 294 GLGPPGSSETDTNNAVFIGGHP 315
+ P T T+ F GG P
Sbjct: 469 RVSYPLLIRTGTS--YFFGGCP 488
>UNIPROTKB|E2R353 [details] [associations]
symbol:FAT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
Pfam:PF02210 ProteinModelPortal:E2R353 Ensembl:ENSCAFT00000011726
Uniprot:E2R353
Length = 4591
Score = 152 (58.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/153 (25%), Positives = 71/153 (46%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
+S ++Y + K + ++ ++T S ++ Y + DY L + +G++ Y F+C
Sbjct: 3840 NSFVKYRLMENENKLEMKLTMRLRTYSAH-AVVMYA---RGTDYSILEIHNGRLQYKFDC 3895
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP +S + DG WH V +L +D A G + G+ KTLN+ +
Sbjct: 3896 GSGPGIVSVQSIQVNDGLWHAVSLEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNHVFF 3955
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
GG T + + + F GC+ ++ N +
Sbjct: 3956 GGHIRQQGTRHGRSAQVGNGFRGCMDSIYLNGQ 3988
>MGI|MGI:1095733 [details] [associations]
symbol:Pros1 "protein S (alpha)" species:10090 "Mus
musculus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005615
"extracellular space" evidence=ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0007599 "hemostasis" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042730 "fibrinolysis"
evidence=IEA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0050766 "positive regulation of phagocytosis" evidence=ISO]
[GO:0050819 "negative regulation of coagulation" evidence=ISO]
InterPro:IPR000294 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00594 Pfam:PF07645 PRINTS:PR00001
PROSITE:PS00011 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50998
SMART:SM00069 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1095733 GO:GO:0005576 GO:GO:0007596 GO:GO:0042730
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
Gene3D:4.10.740.10 InterPro:IPR017857 SUPFAM:SSF57630
HOGENOM:HOG000065758 HOVERGEN:HBG051702 CTD:5627 eggNOG:NOG124763
KO:K03908 OMA:WNMVSVE OrthoDB:EOG4PRSQB EMBL:Z25469 EMBL:L27439
IPI:IPI00124374 PIR:S43504 RefSeq:NP_035303.1 UniGene:Mm.127156
ProteinModelPortal:Q08761 SMR:Q08761 STRING:Q08761
PhosphoSite:Q08761 PaxDb:Q08761 PRIDE:Q08761
Ensembl:ENSMUST00000023629 GeneID:19128 KEGG:mmu:19128
InParanoid:Q08761 NextBio:295742 Bgee:Q08761 CleanEx:MM_PROS1
Genevestigator:Q08761 GermOnline:ENSMUSG00000022912 Uniprot:Q08761
Length = 675
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 62/245 (25%), Positives = 105/245 (42%)
Query: 7 AGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH 66
AG + P IT RF +FDF T + +GII Y + H +++ + ++DG+I
Sbjct: 307 AGVVLYLKFRLPDIT-RFSAEFDFR-----TYDSEGIILYAESLDHSNWLLIALRDGKIE 360
Query: 67 YSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSS-KTLNI 125
F +++G +I +G W+ V S +KI + V GS K +
Sbjct: 361 VQFK-NEFSTQITTGGNVINNGIWNMVSVEELDDSVSIKIAKEAVMNINKLGSLFKPTDG 419
Query: 126 F--GPFYLGGVPLNT-STLVRGNLGLNDTFVGCLR--NLKSNNKLVQDKHTSSGVIP--C 178
F Y G+P S L++ +N GC+R NL L K G C
Sbjct: 420 FLDTKIYFAGLPRKVESALIKP---INPRLDGCIRGWNLMKQGALGA-KEIIEGKQNKHC 475
Query: 179 SDKTESGVFFYNSGGYVKGVEQFRV----GREMELKMDVKPRNISGLLLSVHSKKDY-FI 233
E G ++ SG ++ V G +M + ++++P +G++L++ S F
Sbjct: 476 FLNVEKGSYYPGSGIAQFSIDYNNVTNAEGWQMNVTLNIRPSTGTGVMLALVSGGTVPFA 535
Query: 234 LQMID 238
L ++D
Sbjct: 536 LSLVD 540
>UNIPROTKB|F6XXM1 [details] [associations]
symbol:FAT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008502 "melatonin receptor activity" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000025 InterPro:IPR000276
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR002278 InterPro:IPR015919 InterPro:IPR017452
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00001 Pfam:PF00008
Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205 PRINTS:PR00237
PRINTS:PR00857 PRINTS:PR01149 PROSITE:PS00232 PROSITE:PS00237
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50262 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:PYEAFIV GO:GO:0008502
Ensembl:ENSCAFT00000011726 EMBL:AAEX03010491 EMBL:AAEX03010490
Uniprot:F6XXM1
Length = 5056
Score = 152 (58.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/153 (25%), Positives = 71/153 (46%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
+S ++Y + K + ++ ++T S ++ Y + DY L + +G++ Y F+C
Sbjct: 3840 NSFVKYRLMENENKLEMKLTMRLRTYSAH-AVVMYA---RGTDYSILEIHNGRLQYKFDC 3895
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP +S + DG WH V +L +D A G + G+ KTLN+ +
Sbjct: 3896 GSGPGIVSVQSIQVNDGLWHAVSLEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNHVFF 3955
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
GG T + + + F GC+ ++ N +
Sbjct: 3956 GGHIRQQGTRHGRSAQVGNGFRGCMDSIYLNGQ 3988
>RGD|1566343 [details] [associations]
symbol:Cntnap5c "contactin associated protein-like 5C"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 OrthoDB:EOG441Q9K CTD:620292
EMBL:AABR03084626 EMBL:AABR03084670 EMBL:AABR03084735
EMBL:AABR03084983 EMBL:AABR03085038 EMBL:AABR03085143
EMBL:AABR03085216 EMBL:AABR03086358 EMBL:AABR03086625 EMBL:BN000871
IPI:IPI00563233 RefSeq:NP_001041331.1 UniGene:Rn.202374
ProteinModelPortal:Q0V8T3 PhosphoSite:Q0V8T3 PRIDE:Q0V8T3
GeneID:297846 KEGG:rno:297846 UCSC:RGD:1566343 NextBio:642741
ArrayExpress:Q0V8T3 Genevestigator:Q0V8T3 Uniprot:Q0V8T3
Length = 1305
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 76/306 (24%), Positives = 130/306 (42%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNC-GS-------GPMALSSGD 82
I +K S Q DG++F+ + + D++ L ++ G++ N GS P+A+
Sbjct: 205 ISLKFKSMQGDGVLFH-GEGQRGDHITLELQKGRLALYLNIDGSKARLSIIAPLAILGS- 262
Query: 83 KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLV 142
L+ D WH+V R +D + KG + L+I GG+P+ +
Sbjct: 263 -LLDDQHWHSVLLERVGKQANFTVDRNT-QHFQIKGETDALDIDYELSFGGIPVPSKP-- 318
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQD-----KHTS-SGVIP--CSDKTESGVFFYNS-GG 193
G L F GC+ N+ N + D KH SG + CS+ + F NS
Sbjct: 319 -GTF-LKKNFHGCIENVYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPEIVPITFVNSRSS 376
Query: 194 YV--KGVEQFRVGREMELKMDVKPRNISGLLLSVH-SKKDYFILQMIDG-SVKATVDNGK 249
Y+ G+ Q G + + + N GLLLS S+ +L ++DG S++ +
Sbjct: 377 YLLLPGIPQIH-G--LSVSFHFRTWNEDGLLLSTELSEGSGTLLLILDGGSLRLLIKKVA 433
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAV 309
+ I T S DG WH++ +N +++ +D+ P L + + N+
Sbjct: 434 RHGTEIITGSS---LNDGLWHSVSINARRNRVTLTLDNDAAS-PALDT-SQLQIYSGNSY 488
Query: 310 FIGGHP 315
+ GG P
Sbjct: 489 YFGGCP 494
Score = 120 (47.3 bits), Expect = 0.00090, P = 0.00090
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 6 IAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKD-GQ 64
++ T+++S + +PT F D S KTT+ G+ +K D++ L + +
Sbjct: 793 VSFTTEASYLYFPTFHAEFSA--DISFFFKTTA-LSGVFLENLGIK--DFLRLEMSSPSE 847
Query: 65 IHYSFNCGSGPMALSSGDKLIL-DGEWHTVEFSRQQLSGKLKIDG--QVVAEGESKGSSK 121
I ++ + G+GP+ L L D +WH + R L++D Q + E + +
Sbjct: 848 ITFTIDVGNGPVELLIQSPYPLNDNQWHYIRAERNLKETSLQVDNLPQSMREASEEAYFR 907
Query: 122 TLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIP- 177
L++ ++GG TS+ +G F+GC+R+L N + L++ SGV P
Sbjct: 908 -LHLTSQLFVGG----TSSRQKG-------FLGCMRSLHLNGQNTDLIERAKLMSGVTPG 955
Query: 178 CSDKTES-GVFFYNSGGYVK 196
C S G N G V+
Sbjct: 956 CLGHCSSYGSNCLNGGKCVE 975
>ZFIN|ZDB-GENE-070122-3 [details] [associations]
symbol:celsr3 "cadherin, EGF LAG seven-pass G-type
receptor 3" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IMP] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 ZFIN:ZDB-GENE-070122-3 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007214 GO:GO:0007218
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 EMBL:CR847503
EMBL:CR382331 EMBL:CT027605 IPI:IPI00773917
Ensembl:ENSDART00000078334 Bgee:F1R8J2 Uniprot:F1R8J2
Length = 2916
Score = 101 (40.6 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 25 KNKFDFSIDIK-TTSEQDGIIFYVA--DVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG 81
+ +F SI + T E +G++FY + KH D++AL + DGQ+ ++ G +S
Sbjct: 1208 RQRFHLSISLSFATLESNGLLFYNGRFNEKH-DFLALEILDGQMVLKYSTGESSTQVSPY 1266
Query: 82 -DKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESK 117
+ DG WHTV K + G+V + K
Sbjct: 1267 LPGGVSDGNWHTVHIHYYN-KPKRSVSGEVQGPSDEK 1302
Score = 89 (36.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 112 AEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDT-FVGCLRNLKSNNKLVQDKH 170
A+G S K+L++ GP +LGGVP N N + F+GC+++L +N+ V
Sbjct: 1330 AQGRQTSSKKSLDLTGPLFLGGVP-NLPE----NFPFSTREFIGCMKDLHIDNRPVDMAG 1384
Query: 171 --TSSGVIP-CSDK 181
++G +P CS K
Sbjct: 1385 FIANNGTLPGCSAK 1398
Score = 58 (25.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 214 KPRNISGLLLSVHSKK-DYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTI 272
+ R+ G+LL + + I Q++ G + +V +G + D CDG+WH +
Sbjct: 1470 RTRSKEGVLLQAQAGQYTNLIFQVVGGQLVFSV--ARGSTRPVRLRLDQVQVCDGRWHDL 1527
>ZFIN|ZDB-GENE-081105-126 [details] [associations]
symbol:cntnap5a "contactin associated protein-like
5a" species:7955 "Danio rerio" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 ZFIN:ZDB-GENE-081105-126
GO:GO:0007165 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 EMBL:CR392363 EMBL:BX957274
IPI:IPI00890469 Ensembl:ENSDART00000112295 ArrayExpress:F1RCQ5
Bgee:F1RCQ5 Uniprot:F1RCQ5
Length = 1306
Score = 99 (39.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/147 (26%), Positives = 63/147 (42%)
Query: 174 GVIPCS-DKTE-SGVFFYNSGGYVKGVEQFRVGREMELKMDV----KPRNISGLLLSVHS 227
G + CS DK+ + V FY + Y+ QF + EL +DV K + SG+ L
Sbjct: 783 GPLQCSGDKSLWNAVSFYQAASYL----QF-ASLQAELSLDVSFFFKTASPSGVFLENIG 837
Query: 228 KKDYFILQMIDGS-VKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
D+ +++ + V + + G GP+ + T P D QWH + A + + VD
Sbjct: 838 LHDFIRVELSSPTAVTFSFNVGDGPV--VLTVKSPVPLNDRQWHWVRAERNVKEACLQVD 895
Query: 287 SMTTDKPGLGPPGSSETDTNNAVFIGG 313
+ P G N +F+GG
Sbjct: 896 QLPLRIIETPPDGHLRLQLGNQLFVGG 922
Score = 96 (38.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/167 (23%), Positives = 73/167 (43%)
Query: 5 VIAGTSKSSRIEYPTITGRFKNKFDFSIDIK-TTSEQDGIIFYVADVKHID--YVALYVK 61
++A T +SS + ++ S+ ++ T DG++ + D Y+ L +
Sbjct: 368 LVATTFQSSSSSFLSLPAPAPVLEGLSVRLQFRTWNPDGLLLSSPLISAQDSCYLILKIS 427
Query: 62 DGQIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSK 121
G++H + + M+ S + + DG WH+V S + L + +D + + K
Sbjct: 428 SGRLHLTHQTSALKMSEVSAGQRVNDGLWHSVSLSARGLQMTMTLDNEPASSIHLKNY-- 485
Query: 122 TLNIFGPFYLGGVPLNTSTLVRGNLGLNDT--FVGCLRNLKSNNKLV 166
L Y GG P++ + + LN T F GC+R + NN+ V
Sbjct: 486 -LEAKDKQYFGGCPVSQND----SSCLNPTMAFQGCVRLILINNQPV 527
>UNIPROTKB|E1BKL9 [details] [associations]
symbol:FAT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0030175 "filopodium" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0007163 "establishment or maintenance of cell
polarity" evidence=IEA] [GO:0007015 "actin filament organization"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0007015 GO:GO:0007163
GO:GO:0005509 GO:GO:0005911 GO:GO:0030027 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030175 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:PYEAFIV
EMBL:DAAA02060206 EMBL:DAAA02060207 EMBL:DAAA02060208
IPI:IPI00697004 Ensembl:ENSBTAT00000027527 Uniprot:E1BKL9
Length = 4587
Score = 151 (58.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/153 (25%), Positives = 71/153 (46%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
+S ++Y + K + ++ ++T S ++ Y + DY L + +G++ Y F+C
Sbjct: 3837 NSFVKYRLMENENKLEMKLTMRLRTYSAH-AVVMYA---RGTDYSILEIHNGRLQYKFDC 3892
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP +S + DG WH V +L +D A G + G+ KTLN+ Y
Sbjct: 3893 GSGPGIVSVQSIQVNDGLWHAVSLEVNGNYARLVLDQVHTASGTAPGTLKTLNLDSHVYF 3952
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
GG + + + + F GC+ ++ N +
Sbjct: 3953 GGHVRQQGSRHGRSPQVGNGFRGCMDSIYLNGQ 3985
>UNIPROTKB|Q14517 [details] [associations]
symbol:FAT1 "Protocadherin Fat 1" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0030027
"lamellipodium" evidence=IEA] [GO:0030175 "filopodium"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0007015 "actin filament organization"
evidence=ISS] [GO:0016337 "cell-cell adhesion" evidence=ISS]
[GO:0007163 "establishment or maintenance of cell polarity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016477 "cell migration" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0007267 "cell-cell signaling" evidence=TAS]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR018097 InterPro:IPR020894
Pfam:PF00008 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005634 GO:GO:0048471 GO:GO:0005887 GO:GO:0016477
GO:GO:0007015 GO:GO:0007163 GO:GO:0005509 GO:GO:0007267
GO:GO:0005911 GO:GO:0030027 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030175 GO:GO:0016337 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0009653 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 Pfam:PF02210 KO:K16506 EMBL:X87241 EMBL:AC107050
EMBL:AC110761 IPI:IPI00940698 RefSeq:NP_005236.2 UniGene:Hs.481371
ProteinModelPortal:Q14517 IntAct:Q14517 MINT:MINT-2806731
STRING:Q14517 PhosphoSite:Q14517 DMDM:8928104 PaxDb:Q14517
PRIDE:Q14517 Ensembl:ENST00000441802 GeneID:2195 KEGG:hsa:2195
UCSC:uc003izf.3 CTD:2195 GeneCards:GC04M187508 HGNC:HGNC:3595
HPA:HPA001869 HPA:HPA023882 MIM:600976 neXtProt:NX_Q14517
PharmGKB:PA164719952 HOGENOM:HOG000046499 HOVERGEN:HBG005641
InParanoid:Q14517 ChiTaRS:FAT1 GenomeRNAi:2195 NextBio:8873
ArrayExpress:Q14517 Bgee:Q14517 CleanEx:HS_FAT1
Genevestigator:Q14517 GermOnline:ENSG00000083857 Uniprot:Q14517
Length = 4588
Score = 150 (57.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/141 (26%), Positives = 65/141 (46%)
Query: 25 KNKFDFSIDIKT-TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDK 83
+NK + + ++ T ++ Y + DY L + G++ Y F+CGSGP +S
Sbjct: 3848 ENKLEMKLTMRLRTYSTHAVVMYA---RGTDYSILEIHHGRLQYKFDCGSGPGIVSVQSI 3904
Query: 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR 143
+ DG+WH V +L +D A G + G+ KTLN+ + GG T
Sbjct: 3905 QVNDGQWHAVALEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNYVFFGGHIRQQGTRHG 3964
Query: 144 GNLGLNDTFVGCLRNLKSNNK 164
+ + + F GC+ ++ N +
Sbjct: 3965 RSPQVGNGFRGCMDSIYLNGQ 3985
>UNIPROTKB|F1MYL5 [details] [associations]
symbol:F1MYL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 OMA:NTENFAN EMBL:DAAA02005291
EMBL:DAAA02005292 EMBL:DAAA02005293 EMBL:DAAA02005294
EMBL:DAAA02005295 EMBL:DAAA02005296 EMBL:DAAA02005297
EMBL:DAAA02005298 EMBL:DAAA02005299 EMBL:DAAA02005300
EMBL:DAAA02005301 EMBL:DAAA02005302 EMBL:DAAA02005303
EMBL:DAAA02005304 EMBL:DAAA02005305 EMBL:DAAA02005306
EMBL:DAAA02005307 EMBL:DAAA02005308 EMBL:DAAA02005309
EMBL:DAAA02005310 IPI:IPI00723450 Ensembl:ENSBTAT00000045240
Uniprot:F1MYL5
Length = 1191
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 77/312 (24%), Positives = 123/312 (39%)
Query: 27 KFDFSIDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD--- 82
+ D I +K S Q DG++F+ + + D++ L ++ G++ N LSS
Sbjct: 75 QLDQVISLKFKSMQGDGVLFH-GEGQRGDHITLELQRGRLALHLNLDDSKPRLSSSPPSA 133
Query: 83 ---KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS 139
L+ D WH+V R +D +KG + L+I GG+P
Sbjct: 134 TLGSLLDDQHWHSVLLERVGKHVNFTVDRHT-QHFRTKGEADALDIDYELSFGGIP---- 188
Query: 140 TLVRGNLG--LNDTFVGCLRNLKSNNKLVQD-----KH---TSSGV-IPCSDKTESGVFF 188
V G G L F GC+ NL N + D KH T V CS+ + F
Sbjct: 189 --VPGKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYTVGNVTFSCSEPQIVPITF 246
Query: 189 YNSGG-YV--KGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDY--FILQMIDGSVKA 243
NS Y+ G Q G + + + N GLLLS + +L + DG+++
Sbjct: 247 VNSSSSYLLLPGTPQID-G--LSVSFQFRTWNKDGLLLSTRLSEGSGTLLLSLEDGTLRL 303
Query: 244 TVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
+ + I T D DG WH++ +N I++ +D+ P +
Sbjct: 304 VIQKMTERAAEILTGRD---LNDGLWHSVSINARRNRITLTLDNDAAS-PAQDT-SRMQI 358
Query: 304 DTNNAVFIGGHP 315
+ N + GG P
Sbjct: 359 YSGNRYYFGGCP 370
>UNIPROTKB|F1PCK3 [details] [associations]
symbol:CNTNAP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00008 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 EMBL:AAEX03010167 EMBL:AAEX03010168
EMBL:AAEX03010169 EMBL:AAEX03010170 EMBL:AAEX03010171
Ensembl:ENSCAFT00000005604 OMA:YANISID Uniprot:F1PCK3
Length = 669
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 77/326 (23%), Positives = 137/326 (42%)
Query: 23 RFKNK----FDFSIDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS---G 74
RF+NK I +K TSE +G+I + + + DY+ L +K ++ +S N GS G
Sbjct: 169 RFRNKKMKTLKDVIALKFKTSESEGVILH-GEGQQGDYITLELKKAKLVFSLNLGSNQLG 227
Query: 75 PM----ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFY 130
P+ ++ +G L+ D WH+V RQ S L +D + V + G L++
Sbjct: 228 PIYGHTSVMTGS-LLDDHHWHSVVIERQGRSINLTLD-RGVQHFRTNGEFDYLDLDYEIT 285
Query: 131 LGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQD-----KHTSSGV----IPCSDK 181
GG+P + + + F GC+ ++ N + D K S V C +
Sbjct: 286 FGGIPFSG----KPSSSSRKNFKGCMESINYNGINITDLARRKKLEPSNVGNLSFSCVEP 341
Query: 182 TESGVFFYNSGGYVKGVEQFRVGREM-ELKMDVKPRNISGLLLSVHSKKDYFILQ--MID 238
VFF N+ Y++ R+ +++ + + N +GLLL ++ ++ + +
Sbjct: 342 YTVPVFF-NATSYLE--VPGRLNQDLFSVSFQFRTWNPNGLLLFSQFAENLGNVEIYLTE 398
Query: 239 GSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPP 298
V ++ + +S I S DGQWH + + +N + +D P
Sbjct: 399 SKVGVHINITQTKMSQIDISSGSGLN-DGQWHEVRFLAKENFAVLTIDGDEASAVRTNSP 457
Query: 299 GSSETDTNNAVFIGGHPFLSLSSKKS 324
+ T F GG FL+ + S
Sbjct: 458 --LQVKTGEKYFFGG--FLNQMNNSS 479
>RGD|1592077 [details] [associations]
symbol:LOC304725 "similar to contactin associated protein-like 5
isoform 1" species:10116 "Rattus norvegicus" [GO:0007155 "cell
adhesion" evidence=IEA] InterPro:IPR000421 InterPro:IPR000742
Pfam:PF00754 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 RGD:1592077 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210 IPI:IPI00952005
Ensembl:ENSRNOT00000041670 ArrayExpress:F1LVW1 Uniprot:F1LVW1
Length = 1111
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 76/307 (24%), Positives = 129/307 (42%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD------KL 84
I +K S Q DG++F+ + + D++ L +++G++ N LSS L
Sbjct: 81 ISLKFKSMQGDGVLFH-GEGQRGDHITLELQNGRLVLYLNLDDKKAWLSSITPSAILGSL 139
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS--TLV 142
+ D WH+V R +D +KG ++ L+I GG+P+ + T V
Sbjct: 140 LDDQHWHSVFLERVGKQVNFTVDRNT-QHFWTKGETEVLDIDYELSFGGIPVPSKPGTFV 198
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQD-----KHTS-SGVIP--CSDKTESGVFFYNSGG- 193
+ N F GC+ NL N + D KH SG + CS+ + F NS
Sbjct: 199 KKN------FHGCIENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQIVPITFVNSRSS 252
Query: 194 --YVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMI--DGSVKATVDNGK 249
++ G Q G + + + N GLLLS + L +I G+++ +
Sbjct: 253 YLFLPGTPQID-G--LSVSFQFRTWNEDGLLLSTELSEGSGTLLLILESGTLRLLIKKVT 309
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS-ETDTNNA 308
G + T DG+WH++ +N +++ VD+ D L P S + + N+
Sbjct: 310 GHGTESLTGRS---LNDGRWHSVSINVRRNRVTLTVDN---DAVSLAPETSGLQIYSGNS 363
Query: 309 VFIGGHP 315
+ GG P
Sbjct: 364 YYFGGCP 370
>UNIPROTKB|P78357 [details] [associations]
symbol:CNTNAP1 "Contactin-associated protein 1"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0005070 "SH3/SH2 adaptor activity"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008076 "voltage-gated potassium channel complex" evidence=ISS]
[GO:0008088 "axon cargo transport" evidence=ISS] [GO:0048812
"neuron projection morphogenesis" evidence=ISS] [GO:0007010
"cytoskeleton organization" evidence=ISS] [GO:0033270 "paranode
region of axon" evidence=ISS] [GO:0030913 "paranodal junction
assembly" evidence=ISS] [GO:0002175 "protein localization to
paranode region of axon" evidence=ISS] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
INTERPRO:IPR002181 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0007165 GO:GO:0007010 GO:GO:0005887 GO:GO:0005070
GO:GO:0008088 GO:GO:0050885 GO:GO:0007155 GO:GO:0004872
GO:GO:0008076 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS00514
PROSITE:PS51406 GO:GO:0033270 Pfam:PF02210 InterPro:IPR003585
SMART:SM00294 GO:GO:0030913 GO:GO:0002175 GO:GO:0050884
HOVERGEN:HBG057718 EMBL:U87223 IPI:IPI00219249 RefSeq:NP_003623.1
UniGene:Hs.408730 ProteinModelPortal:P78357 SMR:P78357
IntAct:P78357 STRING:P78357 PhosphoSite:P78357 DMDM:17433016
PaxDb:P78357 PRIDE:P78357 DNASU:8506 Ensembl:ENST00000264638
GeneID:8506 KEGG:hsa:8506 UCSC:uc002iay.3 CTD:8506
GeneCards:GC17P040835 HGNC:HGNC:8011 HPA:HPA011772 MIM:602346
neXtProt:NX_P78357 PharmGKB:PA26691 eggNOG:NOG291100
HOGENOM:HOG000230964 InParanoid:P78357 KO:K07379 OMA:RHDLHYH
OrthoDB:EOG40GCQ0 PhylomeDB:P78357 ChiTaRS:CNTNAP1 GenomeRNAi:8506
NextBio:31835 Bgee:P78357 CleanEx:HS_CNTNAP1 Genevestigator:P78357
GermOnline:ENSG00000108797 Uniprot:P78357
Length = 1384
Score = 144 (55.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 76/322 (23%), Positives = 134/322 (41%)
Query: 15 IEYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
I Y G ++ +D F+ KT E+DG++ + A+ DYV L ++ + + GS
Sbjct: 183 ISYRFPRGVSRSLWDVFAFSFKT-EEKDGLLLH-AEGAQGDYVTLELEGAHLLLHMSLGS 240
Query: 74 GPM-------ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIF 126
P+ +S+G ++ D WH V R +DG V G + LN+
Sbjct: 241 SPIQPRPGHTTVSAGG-VLNDQHWHYVRVDRFGRDVNFTLDGYV-QRFILNGDFERLNLD 298
Query: 127 GPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQD----KH---TSSGVIP-- 177
++GG+ R NL F GC+ N+ N + D +H T G +
Sbjct: 299 TEMFIGGLV----GAARKNLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFR 354
Query: 178 CSDKTESGVFFYNSGGYVKGVEQF-RVGREMELKMDVKPRNISGLLL--SVHSKKDYFIL 234
C D + F +V+ V F R GR + + + +++GLLL + + L
Sbjct: 355 CLDPVPHPINFGGPHNFVQ-VPGFPRRGR-LAVSFRFRTWDLTGLLLFSRLGDGLGHVEL 412
Query: 235 QMIDGSVKATV-DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKP 293
+ +G V ++ +G+ + + Y DG WH + + +N +++D + +
Sbjct: 413 TLSEGQVNVSIAQSGRKKLQF----AAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEV 468
Query: 294 GLGPPGSSETDTNNAVFIGGHP 315
+ P T T+ F GG P
Sbjct: 469 RVSYPLLIRTGTS--YFFGGCP 488
>UNIPROTKB|F1LM26 [details] [associations]
symbol:LOC304725 "Protein LOC304725" species:10116 "Rattus
norvegicus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 RGD:1592077 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210 IPI:IPI00564888
Ensembl:ENSRNOT00000047976 ArrayExpress:F1LM26 Uniprot:F1LM26
Length = 1292
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 76/307 (24%), Positives = 129/307 (42%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD------KL 84
I +K S Q DG++F+ + + D++ L +++G++ N LSS L
Sbjct: 205 ISLKFKSMQGDGVLFH-GEGQRGDHITLELQNGRLVLYLNLDDKKAWLSSITPSAILGSL 263
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS--TLV 142
+ D WH+V R +D +KG ++ L+I GG+P+ + T V
Sbjct: 264 LDDQHWHSVFLERVGKQVNFTVDRNT-QHFWTKGETEVLDIDYELSFGGIPVPSKPGTFV 322
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQD-----KHTS-SGVIP--CSDKTESGVFFYNSGG- 193
+ N F GC+ NL N + D KH SG + CS+ + F NS
Sbjct: 323 KKN------FHGCIENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQIVPITFVNSRSS 376
Query: 194 --YVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMI--DGSVKATVDNGK 249
++ G Q G + + + N GLLLS + L +I G+++ +
Sbjct: 377 YLFLPGTPQID-G--LSVSFQFRTWNEDGLLLSTELSEGSGTLLLILESGTLRLLIKKVT 433
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS-ETDTNNA 308
G + T DG+WH++ +N +++ VD+ D L P S + + N+
Sbjct: 434 GHGTESLTGRS---LNDGRWHSVSINVRRNRVTLTVDN---DAVSLAPETSGLQIYSGNS 487
Query: 309 VFIGGHP 315
+ GG P
Sbjct: 488 YYFGGCP 494
Score = 96 (38.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 33/131 (25%), Positives = 53/131 (40%)
Query: 184 SGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGS-VK 242
+ V F Y+ F V ++ K +SG+ L K + L+M S V
Sbjct: 778 NAVSFSTEASYLH-FSAFHVEFSADISFFFKTTALSGIFLENLGIKGFLRLEMSSPSEVI 836
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSE 302
+D G PI + PY D QWH I A + + VD++ +K + +
Sbjct: 837 FAIDVGNSPIELLV--QSPYPLNDNQWHYIQAERNIKETLLQVDNLPKNKREVSDQSNFL 894
Query: 303 TDTNNAVFIGG 313
++ +FIGG
Sbjct: 895 LQLSSQLFIGG 905
Score = 82 (33.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 38/164 (23%), Positives = 70/164 (42%)
Query: 5 VIAGTSKSSRIEYPTITGRFK-NKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG 63
++ T +SR Y + G + + S +T +E DG++ + + L ++ G
Sbjct: 365 IVPITFVNSRSSYLFLPGTPQIDGLSVSFQFRTWNE-DGLLLSTELSEGSGTLLLILESG 423
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEG-ESKGSSKT 122
+ +G S + + DG WH+V + ++ L +D V+ E+ G
Sbjct: 424 TLRLLIKKVTGHGTESLTGRSLNDGRWHSVSINVRRNRVTLTVDNDAVSLAPETSG---- 479
Query: 123 LNIFG--PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
L I+ +Y GG P N + V L F GC+R + +N+
Sbjct: 480 LQIYSGNSYYFGGCPDNLT--VSQCLNPIKAFQGCMRLIFIDNQ 521
>UNIPROTKB|Q0V8T5 [details] [associations]
symbol:Cntnap5b "Contactin-associated protein like 5-2"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 RGD:1565194 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0007165 GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 OrthoDB:EOG4RFKVD
EMBL:AABR03084824 EMBL:AABR03084984 EMBL:AABR03085000
EMBL:AABR03085128 EMBL:AABR03085301 EMBL:AABR03085395
EMBL:AABR03085665 EMBL:AABR03085695 EMBL:AABR03085869
EMBL:AABR03085874 EMBL:AABR03086267 EMBL:AABR03086376
EMBL:AABR03087382 EMBL:AABR03086635 EMBL:AABR03088686 EMBL:BN000869
IPI:IPI00564888 RefSeq:XP_002724886.1 RefSeq:XP_002728032.1
UniGene:Rn.199861 UniGene:Rn.202933 ProteinModelPortal:Q0V8T5
PRIDE:Q0V8T5 GeneID:304725 KEGG:rno:304725 NextBio:653521
ArrayExpress:Q0V8T5 Genevestigator:Q0V8T5 Uniprot:Q0V8T5
Length = 1292
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 76/307 (24%), Positives = 129/307 (42%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD------KL 84
I +K S Q DG++F+ + + D++ L +++G++ N LSS L
Sbjct: 205 ISLKFKSMQGDGVLFH-GEGQRGDHITLELQNGRLVLYLNLDDKKAWLSSITPSAILGSL 263
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTS--TLV 142
+ D WH+V R +D +KG ++ L+I GG+P+ + T V
Sbjct: 264 LDDQHWHSVFLERVGKQVNFTVDRNT-QHFWTKGETEVLDIDYELSFGGIPVPSKPGTFV 322
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQD-----KHTS-SGVIP--CSDKTESGVFFYNSGG- 193
+ N F GC+ NL N + D KH SG + CS+ + F NS
Sbjct: 323 KKN------FHGCIENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQIVPITFVNSRSS 376
Query: 194 --YVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMI--DGSVKATVDNGK 249
++ G Q G + + + N GLLLS + L +I G+++ +
Sbjct: 377 YLFLPGTPQID-G--LSVSFQFRTWNEDGLLLSTELSEGSGTLLLILESGTLRLLIKKVT 433
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS-ETDTNNA 308
G + T DG+WH++ +N +++ VD+ D L P S + + N+
Sbjct: 434 GHGTESLTGRS---LNDGRWHSVSINVRRNRVTLTVDN---DAVSLAPETSGLQIYSGNS 487
Query: 309 VFIGGHP 315
+ GG P
Sbjct: 488 YYFGGCP 494
Score = 96 (38.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 33/131 (25%), Positives = 53/131 (40%)
Query: 184 SGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGS-VK 242
+ V F Y+ F V ++ K +SG+ L K + L+M S V
Sbjct: 778 NAVSFSTEASYLH-FSAFHVEFSADISFFFKTTALSGIFLENLGIKGFLRLEMSSPSEVI 836
Query: 243 ATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSE 302
+D G PI + PY D QWH I A + + VD++ +K + +
Sbjct: 837 FAIDVGNSPIELLV--QSPYPLNDNQWHYIQAERNIKETLLQVDNLPKNKREVSDQSNFL 894
Query: 303 TDTNNAVFIGG 313
++ +FIGG
Sbjct: 895 LQLSSQLFIGG 905
Score = 82 (33.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 38/164 (23%), Positives = 70/164 (42%)
Query: 5 VIAGTSKSSRIEYPTITGRFK-NKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG 63
++ T +SR Y + G + + S +T +E DG++ + + L ++ G
Sbjct: 365 IVPITFVNSRSSYLFLPGTPQIDGLSVSFQFRTWNE-DGLLLSTELSEGSGTLLLILESG 423
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEG-ESKGSSKT 122
+ +G S + + DG WH+V + ++ L +D V+ E+ G
Sbjct: 424 TLRLLIKKVTGHGTESLTGRSLNDGRWHSVSINVRRNRVTLTVDNDAVSLAPETSG---- 479
Query: 123 LNIFG--PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
L I+ +Y GG P N + V L F GC+R + +N+
Sbjct: 480 LQIYSGNSYYFGGCPDNLT--VSQCLNPIKAFQGCMRLIFIDNQ 521
>UNIPROTKB|Q0V8T0 [details] [associations]
symbol:CNTNAP5 "Contactin-associated protein-like 5"
species:9615 "Canis lupus familiaris" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 EMBL:AAEX02006971
EMBL:AAEX02006972 EMBL:AAEX02006973 EMBL:AAEX02006974
EMBL:AAEX02006975 EMBL:AAEX02006976 EMBL:AAEX02006977 EMBL:BN000917
RefSeq:NP_001041573.1 UniGene:Cfa.39078 ProteinModelPortal:Q0V8T0
GeneID:483874 KEGG:cfa:483874 CTD:129684 InParanoid:Q0V8T0
OrthoDB:EOG441Q9K NextBio:20858199 Uniprot:Q0V8T0
Length = 1305
Score = 143 (55.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 74/306 (24%), Positives = 123/306 (40%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD------KL 84
I +K S Q DG++F+ + + D++ L ++ G++ N LSS L
Sbjct: 205 ISLKFKSMQGDGVLFH-GEGQRGDHITLELQKGRLALHLNLDDSKPRLSSSPPSVTLGSL 263
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
+ D +WH+V R +D +KG + L+I GG+P V G
Sbjct: 264 LDDQQWHSVLIERVGKQVNFSVDKHT-QHFRTKGEADALDIDYELSFGGIP------VPG 316
Query: 145 NLG--LNDTFVGCLRNLKSNNKLVQD-----KH---TSSGVIPCSDKTESGVFFYNSGG- 193
G L F GC+ NL N + D KH T + CS+ + F NS
Sbjct: 317 KPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYTGNVTFSCSEPQIVPITFVNSSSS 376
Query: 194 YV--KGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDY--FILQMIDGSVKATVDNGK 249
Y+ G Q G + + + N GLLLS + +L + G+V+ +
Sbjct: 377 YLLLPGTPQID-G--LSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGTVRLVIQKMT 433
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAV 309
+ I T S DG WH++ ++ I++++D+ P + + N+
Sbjct: 434 ERTAEILTGSS---LNDGLWHSVSINARRDRITLSLDNDAAS-PAQDTT-RVQIYSGNSY 488
Query: 310 FIGGHP 315
+ GG P
Sbjct: 489 YFGGCP 494
Score = 128 (50.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 51/201 (25%), Positives = 92/201 (45%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKD-GQIHYS 68
+++S + +PT F D S KTT+ G+ +K D++ L + +I ++
Sbjct: 797 TEASYLHFPTFHAEFSA--DISFFFKTTA-LSGVFLENLGIK--DFIRLEISSPSEITFA 851
Query: 69 FNCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSGKLKIDG--QVVAEGESKGSSKTLNI 125
+ G+GP+ L L+ D +WH + R L++D ++ E +G + L +
Sbjct: 852 IDVGNGPVELIVHSPSLLNDNQWHYIRAERNLKETSLQVDSLPRMTRETSEEGHFR-LQL 910
Query: 126 FGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK---LVQDKHTSSGVIP-CSDK 181
++GG TS+ +G F+GC+R+L N + L + +SGV P C
Sbjct: 911 NSQLFVGG----TSSRQKG-------FLGCIRSLHLNGQKLDLEERAKVTSGVRPGCPGH 959
Query: 182 TES-GVFFYNSGGYVKGVEQF 201
+ G +N G K VE++
Sbjct: 960 CSTYGSICHNGG---KCVEKY 977
Score = 39 (18.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 8/46 (17%), Positives = 24/46 (52%)
Query: 236 MIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVI 281
+++ S + VD ++ +++ SDP+ D + A+++ + +
Sbjct: 1193 LMESSCGSMVDVDVNTVTTVHSSSDPFGKTDEREPLTNAVRSDSAV 1238
>MGI|MGI:2183572 [details] [associations]
symbol:Cntnap4 "contactin associated protein-like 4"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030425 "dendrite" evidence=IDA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 MGI:MGI:2183572 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0007165 GO:GO:0030425 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 EMBL:CH466525
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210
HOVERGEN:HBG057718 eggNOG:NOG291100 GeneTree:ENSGT00560000076804
CTD:85445 EMBL:AF333770 EMBL:AK142816 EMBL:BC034628 IPI:IPI00120292
RefSeq:NP_569724.2 UniGene:Mm.209232 UniGene:Mm.403088
ProteinModelPortal:Q99P47 SMR:Q99P47 STRING:Q99P47
PhosphoSite:Q99P47 PaxDb:Q99P47 PRIDE:Q99P47
Ensembl:ENSMUST00000034225 GeneID:170571 KEGG:mmu:170571
NextBio:370119 Bgee:Q99P47 CleanEx:MM_CNTNAP4 Genevestigator:Q99P47
GermOnline:ENSMUSG00000031772 Uniprot:Q99P47
Length = 1310
Score = 143 (55.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 81/334 (24%), Positives = 132/334 (39%)
Query: 32 IDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSG------DKL 84
I +K T E DGI+ + A D++ L ++ G++ N G + SS L
Sbjct: 210 ISLKFKTMESDGILLHRAGPAG-DHITLELRRGKLFLLINSGDARLTSSSTLINLTLGSL 268
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
+ D WH+V R +D + ++G L++ GG+ ++
Sbjct: 269 LDDQHWHSVLIQRLGKQVNFTVD-EHRRHFHAQGEFNYLDLDYEISFGGISAPAKSV--- 324
Query: 145 NLGLNDTFVGCLRNLKSNNK----LVQDKHT------SSGVIPCSDKTESGVFFYNSGGY 194
+L F GCL NL N LV++ H+ + CS + F + Y
Sbjct: 325 SLPYKH-FHGCLENLFYNGVDVIGLVKE-HSPQIITMGNASFSCSQPQSMPLTFLSPRSY 382
Query: 195 VKGVEQFRVGREMELKMDVKPRNISGLLL--SVHSKKDYFILQMIDGSVKATV-DNGKGP 251
+ + + + N +GLLL + +L + DG +K T+ GK P
Sbjct: 383 LV-LPASTKEEAISASFQFRTWNKAGLLLFSELQLVSGSLLLLLSDGKLKLTLYQPGKSP 441
Query: 252 ISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS-MTTDKPGLGPPGSSETDTNNAVF 310
S I + DGQWH++ +N +SV VD ++ P LGP + ++ +
Sbjct: 442 -SDITAGAG---LGDGQWHSVSLSAKRNHLSVVVDGHISPASPWLGP---EQVNSGGVFY 494
Query: 311 IGGHPFLSLSSKKSGPRTKRRSVF-LINANCKAV 343
GG P SK P + LI+ N K V
Sbjct: 495 FGGCPDKGFGSKCKSPLGGFQGCMRLISINNKMV 528
>MGI|MGI:1858201 [details] [associations]
symbol:Cntnap1 "contactin associated protein-like 1"
species:10090 "Mus musculus" [GO:0002175 "protein localization to
paranode region of axon" evidence=IMP] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IDA] [GO:0008088 "axon cargo transport" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISO] [GO:0017124 "SH3 domain binding"
evidence=ISO] [GO:0030424 "axon" evidence=ISO] [GO:0030913
"paranodal junction assembly" evidence=IMP] [GO:0031175 "neuron
projection development" evidence=IGI] [GO:0033270 "paranode region
of axon" evidence=ISO;IDA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0050884 "neuromuscular process
controlling posture" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
MGI:MGI:1858201 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0005886
GO:GO:0007165 GO:GO:0007010 GO:GO:0008088 GO:GO:0050885
GO:GO:0007155 GO:GO:0048812 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0033270 EMBL:AL590969
Pfam:PF02210 InterPro:IPR003585 SMART:SM00294 GO:GO:0030913
GO:GO:0002175 GO:GO:0050884 HOVERGEN:HBG057718 CTD:8506
eggNOG:NOG291100 HOGENOM:HOG000230964 KO:K07379 OMA:RHDLHYH
OrthoDB:EOG40GCQ0 EMBL:AF039833 IPI:IPI00338983 PIR:T14158
RefSeq:NP_058062.2 UniGene:Mm.474527 ProteinModelPortal:O54991
SMR:O54991 IntAct:O54991 STRING:O54991 PhosphoSite:O54991
PaxDb:O54991 PRIDE:O54991 Ensembl:ENSMUST00000103109 GeneID:53321
KEGG:mmu:53321 GeneTree:ENSGT00560000076804 InParanoid:A2A4K6
NextBio:310125 Bgee:O54991 CleanEx:MM_CNTNAP1 Genevestigator:O54991
GermOnline:ENSMUSG00000017167 Uniprot:O54991
Length = 1385
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 74/321 (23%), Positives = 128/321 (39%)
Query: 15 IEYPTITGRFKNKFD-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
I Y G ++ +D F+ KT E+DG++ + + DYV L ++ + + GS
Sbjct: 184 ISYRFQRGASQSLWDVFAFSFKT-EEKDGLLLHTEGSQG-DYVTLELQGAHLLLHMSLGS 241
Query: 74 GPMALSSGDKLI-LDG-----EWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
P+ G + L G WH V R +DG G + LN+
Sbjct: 242 SPIQPRPGHTTVSLGGVLNDLSWHYVRVDRYGRDANFTLDGYA-HHFVLNGDFERLNLEN 300
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQD----KH---TSSGVIP--C 178
++GG+ R NL F GC+ N+ N + + +H T G + C
Sbjct: 301 EIFIGGLV----GAARKNLAYRHNFRGCIENVIYNRINIAEMAVMRHSRITFEGNVAFRC 356
Query: 179 SDKTESGVFFYNSGGYVKGVEQF-RVGREMELKMDVKPRNISGLLLSVH--SKKDYFILQ 235
D + F +V+ V F R GR + + + +++GLLL H + L
Sbjct: 357 LDPVPHPINFGGPHNFVQ-VPGFPRRGR-LAVSFRFRTWDLTGLLLFSHLGDGLGHVELM 414
Query: 236 MIDGSVKATV-DNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPG 294
+ +G V ++ G+ + + Y DG WH + + +N +++D + +
Sbjct: 415 LSEGQVNVSIAQTGRKKLQF----AAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVR 470
Query: 295 LGPPGSSETDTNNAVFIGGHP 315
+ P T T+ F GG P
Sbjct: 471 VSYPLLIRTGTS--YFFGGCP 489
>UNIPROTKB|E2R4F0 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0021591 "ventricular system development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00179 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 CTD:1952 KO:K04601 OMA:YILRAYA EMBL:AAEX03004736
RefSeq:XP_537042.2 ProteinModelPortal:E2R4F0
Ensembl:ENSCAFT00000031564 GeneID:479916 KEGG:cfa:479916
NextBio:20855025 Uniprot:E2R4F0
Length = 2926
Score = 104 (41.7 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 33/87 (37%), Positives = 47/87 (54%)
Query: 112 AEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ--D 168
A+G GS K+L++ GP LGGVP L S VR FVGC+RNL+ +++ V D
Sbjct: 1509 AQGTQGGSKKSLDLTGPLLLGGVPDLPESFPVRTR-----HFVGCMRNLQVDSRHVDMAD 1563
Query: 169 KHTSSGVIP-C-SDKTESGVFFYNSGG 193
++G +P C + K N+GG
Sbjct: 1564 FVANNGTVPGCPAKKNVCDSSTCNNGG 1590
Score = 101 (40.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 20 ITGR-FKNKFDFSIDIK-TTSEQDGIIFYVA--DVKHIDYVALYVKDGQIHYSFNCGSGP 75
IT R + +F F++ + T E+DG++ Y + KH D+VAL V Q+ +F+ G
Sbjct: 1381 ITFRGLRQRFHFTLALSFATKERDGLLLYNGRFNEKH-DFVALEVIQEQVQLTFSAGEST 1439
Query: 76 MALSSG-DKLILDGEWHTVE 94
+S + DG+WHTV+
Sbjct: 1440 TTVSPFVPGGVSDGQWHTVQ 1459
Score = 39 (18.8 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 293 PGLGPPGS 300
PGLG PGS
Sbjct: 2700 PGLGDPGS 2707
Score = 39 (18.8 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 289 TTDKPGLGPPG 299
+T PG GPPG
Sbjct: 2691 STLNPGQGPPG 2701
>WB|WBGene00018304 [details] [associations]
symbol:agr-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0005605 "basal lamina" evidence=IDA] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00050 Pfam:PF07648 SMART:SM00181
SMART:SM00280 GO:GO:0009792 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 KO:K06254
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00274 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR011497
GeneTree:ENSGT00530000063501 Pfam:PF02210 EMBL:AM773423
EMBL:FO081361 RefSeq:NP_001022152.3 UniGene:Cel.24197
ProteinModelPortal:G5EG68 SMR:G5EG68 EnsemblMetazoa:F41G3.12
GeneID:3565243 KEGG:cel:CELE_F41G3.12 CTD:3565243 WormBase:F41G3.12
OMA:SARICGE NextBio:955733 Uniprot:G5EG68
Length = 1473
Score = 143 (55.4 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 36/137 (26%), Positives = 71/137 (51%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHID----YVALYVKDGQIHYSFNCGSGP-MALSSGDK 83
+FS D +T +Q G+I+ D ++ +++++G+++ N G+ + S +
Sbjct: 1315 NFSFDFRTL-KQFGVIWQEGAWSQADEGGDFLLVFIEEGKLYVGVNLGADVHLKPISTNV 1373
Query: 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR 143
+ D WH+V F R++ +L +D + + + L+ G YLGG L++
Sbjct: 1374 TVADNHWHSVSFRRKERKCELWVDSKKILHVVASPGDVNLDSNGLVYLGGANPKKHKLLK 1433
Query: 144 GNLGLNDTFVGCLRNLK 160
+L L++ FVGC++NLK
Sbjct: 1434 -SLNLSNKFVGCVKNLK 1449
>UNIPROTKB|F1NWW5 [details] [associations]
symbol:FAT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005911 "cell-cell
junction" evidence=IEA] [GO:0007015 "actin filament organization"
evidence=IEA] [GO:0007163 "establishment or maintenance of cell
polarity" evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA]
[GO:0030175 "filopodium" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0007015 GO:GO:0007163
GO:GO:0005509 GO:GO:0005911 GO:GO:0030027 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030175 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:PYEAFIV
EMBL:AADN02031427 EMBL:AADN02031428 IPI:IPI00591842
Ensembl:ENSGALT00000022100 ArrayExpress:F1NWW5 Uniprot:F1NWW5
Length = 4592
Score = 159 (61.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 40/155 (25%), Positives = 74/155 (47%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
S +S ++Y + K + ++ ++T S ++ Y + DY L + G++ Y F
Sbjct: 3840 SGNSYVKYRLMENENKEEMKLTMRLRTYSAH-AVVMYA---RGTDYSILEIHHGRLQYKF 3895
Query: 70 NCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
+CGSGP +S I DG+WH+V +L +D A G + G+ +TLN+
Sbjct: 3896 DCGSGPGIVSVQSIQINDGQWHSVSLEVDGNYARLVLDRVHTASGTAPGTLRTLNLDNHV 3955
Query: 130 YLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
+ GG T + +++ F GC+ ++ N +
Sbjct: 3956 FFGGHIRQQGTRHGRSPQVSNGFRGCMDSIVLNGQ 3990
Score = 39 (18.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 191 SGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKG 250
S G+ +G V EL ++ KPRN + + SV IL +G NG G
Sbjct: 3975 SNGF-RGCMDSIVLNGQELPLNSKPRNYAHMEESVDVTPGC-ILTTTEGCSSNPCQNG-G 4031
Query: 251 PISAIYTPSDPYFFC 265
+A+ S+ ++C
Sbjct: 4032 ICNAL---SNGGYYC 4043
>UNIPROTKB|E1BJ11 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0021591 "ventricular system development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001368
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00208
SMART:SM00303 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:YILRAYA
EMBL:DAAA02007576 IPI:IPI00711984 Ensembl:ENSBTAT00000025033
Uniprot:E1BJ11
Length = 2918
Score = 102 (41.0 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 112 AEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ--D 168
A+G GS K+L++ GP LGGVP L S VR FVGC+RNL+ +++ V D
Sbjct: 1501 AQGTQGGSKKSLDLTGPLLLGGVPDLPESFPVRTR-----QFVGCIRNLQVDSRHVDMAD 1555
Query: 169 KHTSSGVIP-CSDK 181
++G +P C K
Sbjct: 1556 FIANNGTMPGCPAK 1569
Score = 101 (40.6 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 20 ITGR-FKNKFDFSIDIK-TTSEQDGIIFYVA--DVKHIDYVALYVKDGQIHYSFNCGSGP 75
IT R + +F F++ + T E+DG++ Y + KH D+VAL V Q+ +F+ G
Sbjct: 1373 ITFRGLRQRFHFTLALSFATKERDGLLLYNGRFNEKH-DFVALEVIQEQVQLTFSAGEST 1431
Query: 76 MALSSG-DKLILDGEWHTVE 94
+S + DG+WHTV+
Sbjct: 1432 TTVSPFVPGGVSDGQWHTVQ 1451
Score = 39 (18.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 289 TTDKPGLGPPG 299
+T PG GPPG
Sbjct: 2683 STLNPGQGPPG 2693
>UNIPROTKB|Q9HCU4 [details] [associations]
symbol:CELSR2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0021591 "ventricular system development" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0021999 "neural plate anterior/posterior regionalization"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0022407 "regulation of cell-cell
adhesion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0007156 "homophilic
cell adhesion" evidence=ISS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=ISS] [GO:0048813 "dendrite morphogenesis"
evidence=ISS] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00208 SMART:SM00303 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0005737 GO:GO:0001764 GO:GO:0006355
GO:GO:0016055 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007283 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0048813 PROSITE:PS01186 GO:GO:0022407
eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23
EMBL:AF234887 EMBL:AB065955 EMBL:AL390252 EMBL:D87469
IPI:IPI00015346 RefSeq:NP_001399.1 UniGene:Hs.57652
ProteinModelPortal:Q9HCU4 SMR:Q9HCU4 IntAct:Q9HCU4
MINT:MINT-1395407 STRING:Q9HCU4 MEROPS:I63.002 PhosphoSite:Q9HCU4
DMDM:22095550 PaxDb:Q9HCU4 PRIDE:Q9HCU4 Ensembl:ENST00000271332
GeneID:1952 KEGG:hsa:1952 UCSC:uc001dxa.4 CTD:1952
GeneCards:GC01P109792 HGNC:HGNC:3231 HPA:HPA013952 MIM:604265
neXtProt:NX_Q9HCU4 PharmGKB:PA26394 InParanoid:Q9HCU4 KO:K04601
OMA:YILRAYA ChiTaRS:CELSR2 GenomeRNAi:1952 NextBio:7911 Bgee:Q9HCU4
CleanEx:HS_CELSR2 Genevestigator:Q9HCU4 GermOnline:ENSG00000143126
GO:GO:0021999 Uniprot:Q9HCU4
Length = 2923
Score = 102 (41.0 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 112 AEGESKGSSKTLNIFGPFYLGGVP-LNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQ--D 168
A+G GS K+L++ GP LGGVP L S VR FVGC+RNL+ +++ + D
Sbjct: 1506 AQGTQGGSKKSLDLTGPLLLGGVPDLPESFPVRMR-----QFVGCMRNLQVDSRHIDMAD 1560
Query: 169 KHTSSGVIP-CSDK 181
++G +P C K
Sbjct: 1561 FIANNGTVPGCPAK 1574
Score = 101 (40.6 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 20 ITGR-FKNKFDFSIDIK-TTSEQDGIIFYVA--DVKHIDYVALYVKDGQIHYSFNCGSGP 75
IT R + +F F++ + T E+DG++ Y + KH D+VAL V Q+ +F+ G
Sbjct: 1378 ITFRGLRQRFHFTLALSFATKERDGLLLYNGRFNEKH-DFVALEVIQEQVQLTFSAGEST 1436
Query: 76 MALSSG-DKLILDGEWHTVE 94
+S + DG+WHTV+
Sbjct: 1437 TTVSPFVPGGVSDGQWHTVQ 1456
Score = 39 (18.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 293 PGLGPPGS 300
PGLG PGS
Sbjct: 2697 PGLGDPGS 2704
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 293 PGLGPPG 299
PG GPPG
Sbjct: 2692 PGQGPPG 2698
>UNIPROTKB|F1SER9 [details] [associations]
symbol:FAT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0030175 "filopodium" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0007163 "establishment or maintenance of cell
polarity" evidence=IEA] [GO:0007015 "actin filament organization"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0007015 GO:GO:0007163
GO:GO:0005509 GO:GO:0005911 GO:GO:0030027 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030175 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:PYEAFIV EMBL:CU062594
EMBL:CU302402 Ensembl:ENSSSCT00000007666 Uniprot:F1SER9
Length = 4587
Score = 146 (56.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 38/153 (24%), Positives = 70/153 (45%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
+S ++Y + K + ++ ++T S ++ Y + DY L + G++ Y F+C
Sbjct: 3836 NSFVKYRLMENENKLEMKLTMRLRTYSSH-AVVMYA---RGTDYSILEIHSGRLQYKFDC 3891
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP +S + DG WH V +L +D A G + G+ KTLN+ +
Sbjct: 3892 GSGPGIVSVQSIQVNDGLWHAVSLEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNHVFF 3951
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
GG + + + + F GC+ ++ N +
Sbjct: 3952 GGHIRQQGSRHGRSPQVGNGFRGCMDSIYLNGQ 3984
>UNIPROTKB|F1NAE5 [details] [associations]
symbol:CNTNAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0002175 "protein localization to paranode region of axon"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008076 "voltage-gated potassium channel complex" evidence=IEA]
[GO:0008088 "axon cargo transport" evidence=IEA] [GO:0030913
"paranodal junction assembly" evidence=IEA] [GO:0033270 "paranode
region of axon" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00008 PROSITE:PS01286 PROSITE:PS50022
PROSITE:PS50026 SMART:SM00181 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007010 GO:GO:0008088 GO:GO:0007155 GO:GO:0008076
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 Pfam:PF00147 SMART:SM00186 SUPFAM:SSF56496
PROSITE:PS51406 GO:GO:0033270 Pfam:PF02210 GO:GO:0002175
OMA:RHDLHYH GeneTree:ENSGT00560000076804 EMBL:AADN02068681
IPI:IPI00578954 Ensembl:ENSGALT00000004939 Uniprot:F1NAE5
Length = 986
Score = 139 (54.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 67/305 (21%), Positives = 121/305 (39%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD------ 82
D S + KT EQDG++ + + DY+ + +K Q+ + GS P+ + G
Sbjct: 76 DISFNFKTV-EQDGVLMH-GEGSQGDYITVELKQAQLLLHISLGSSPLHATEGHTTVAVG 133
Query: 83 KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLV 142
L+ D WH++ R L +DG+V G+ L++ + GGV ++
Sbjct: 134 SLLDDQHWHSLHIERYGHHVNLTLDGEV-KRFRCHGTFDHLDLETEIFFGGV-IDQD--- 188
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQD--KHTSS-----GVIP--CSDKTESGVFFYNSGG 193
+ +L F GC+ N+ N + D +H S G + C D+ + + F
Sbjct: 189 KQHLTYRQNFRGCVENIIFNGVNIADLARHRRSNIRFEGSVGHYCQDQVNTPITFAGINN 248
Query: 194 YVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMI--DGSVKATVDN-GKG 250
YV+ V + + + + +GLLL L+M+ +G V ++ GK
Sbjct: 249 YVQ-VPGIPRRNRLAVSFRFRSWDTAGLLLYTSFADRLGSLEMVLSEGQVNVSIAQPGKK 307
Query: 251 PISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVF 310
+ F WH++ + + V +D + + P + T + F
Sbjct: 308 KLEFAAGGLGAAF-----WHSVQLVAREGSAVVTIDDDDGAEFRVAHP--FQLRTGSQYF 360
Query: 311 IGGHP 315
GG P
Sbjct: 361 FGGCP 365
>MGI|MGI:3643623 [details] [associations]
symbol:Cntnap5a "contactin associated protein-like 5A"
species:10090 "Mus musculus" [GO:0004190 "aspartic-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742
InterPro:IPR001969 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
MGI:MGI:3643623 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0006508 GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 GO:GO:0004190 Pfam:PF02210
HOVERGEN:HBG057718 eggNOG:NOG291100 HOGENOM:HOG000230964
GeneTree:ENSGT00560000076804 EMBL:AC098737 EMBL:AC110160
EMBL:AC122189 EMBL:AC122812 EMBL:AC124547 EMBL:AC124690
EMBL:AC132403 EMBL:BN000865 IPI:IPI00750221 RefSeq:NP_001070893.1
UniGene:Mm.337385 ProteinModelPortal:Q0V8T9 SMR:Q0V8T9
PhosphoSite:Q0V8T9 PaxDb:Q0V8T9 PRIDE:Q0V8T9 DNASU:636808
Ensembl:ENSMUST00000094621 GeneID:636808 KEGG:mmu:636808
UCSC:uc007cia.1 CTD:636808 NextBio:423786 Bgee:Q0V8T9
CleanEx:MM_CNTNAP5A Genevestigator:Q0V8T9 Uniprot:Q0V8T9
Length = 1304
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 74/305 (24%), Positives = 128/305 (41%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLIL---- 86
I +K S Q DG++F+ + + D++ L ++ G++ N LSS L++
Sbjct: 205 ISLKFKSMQGDGVLFH-GEGQRGDHITLELQKGRLALYLNLDDSKARLSSTVPLVILGSL 263
Query: 87 --DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
D WH+V R +D +KG + +L+I GG+P+ + G
Sbjct: 264 LDDQHWHSVLLERVGKQANFTVDMNT-QHFRTKGDTDSLDIDYELSFGGIPVPSKP---G 319
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQD-----KHTS-SGVIP--CSDKTESGVFFYNS-GGYV 195
L F GC+ NL N + D KH SG + CS+ + F NS Y+
Sbjct: 320 TF-LKKNFHGCIENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQIVPITFINSRSSYL 378
Query: 196 K--GVEQFRVGREMELKMDVKPRNISGLLLSVH-SKKDYFILQMIDG-SVKATVDNGKGP 251
G Q G + + + N GLLLS S+ +L +++G +++ +
Sbjct: 379 MLPGTPQID-G--LSVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKVARH 435
Query: 252 ISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSS-ETDTNNAVF 310
+ I T S DG WH++ +N +++ +D+ D P S + + + +
Sbjct: 436 GTEILTGSG---LNDGLWHSVSINARRNRVTLTLDN---DAASPAPDTSRIQIYSGKSYY 489
Query: 311 IGGHP 315
GG P
Sbjct: 490 FGGCP 494
>UNIPROTKB|H7C3D6 [details] [associations]
symbol:NRXN2 "Neurexin-2" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] InterPro:IPR027160
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 EMBL:AP001462 HGNC:HGNC:8009 ChiTaRS:NRXN2
PANTHER:PTHR10127:SF307 EMBL:AP001092 ProteinModelPortal:H7C3D6
SMR:H7C3D6 Ensembl:ENST00000417749 Uniprot:H7C3D6
Length = 206
Score = 126 (49.4 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLILDGEWHTVE 94
T +++G++ + K DYV L +K G + N GSG AL + D WH V
Sbjct: 81 TLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVR 138
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVG 154
+R + +DG + G ++ L FY+GG P NT+ L G+ +++ F+G
Sbjct: 139 VTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSP-NTADLP-GS-PVSNNFMG 195
Query: 155 CLRNLKSNN 163
CL+++ N
Sbjct: 196 CLKDVVYKN 204
>RGD|620971 [details] [associations]
symbol:Pros1 "protein S (alpha)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEP] [GO:0042730 "fibrinolysis" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0050766 "positive regulation of
phagocytosis" evidence=IDA] [GO:0050819 "negative regulation of
coagulation" evidence=IDA;TAS] InterPro:IPR000294
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00594 Pfam:PF07645 PRINTS:PR00001 PROSITE:PS00011
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50998 SMART:SM00069
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:620971
GO:GO:0005615 GO:GO:0043234 GO:GO:0032403 GO:GO:0007596
GO:GO:0032496 GO:GO:0042730 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0050766 PROSITE:PS01186
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0050819 Pfam:PF02210 Gene3D:4.10.740.10
InterPro:IPR017857 SUPFAM:SSF57630 HOVERGEN:HBG051702 EMBL:S78744
IPI:IPI00213693 PIR:JC4180 UniGene:Rn.2888
ProteinModelPortal:P53813 SMR:P53813 PRIDE:P53813
Genevestigator:P53813 Uniprot:P53813
Length = 675
Score = 136 (52.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 62/248 (25%), Positives = 107/248 (43%)
Query: 7 AGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH 66
AG + P IT RF +FDF T + +GII Y + H +++ + +++G+I
Sbjct: 307 AGVVLYLKFRLPDIT-RFSAEFDFR-----TYDSEGIILYAESLDHSNWLLIALREGKIE 360
Query: 67 YSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSS-KTLNI 125
F +++G +I +G W+ V S +KI + V GS K +
Sbjct: 361 VQFK-NEFSTQITTGGNVINNGIWNMVSVEELDDSVSIKIAKEAVMNINKLGSLFKPTDG 419
Query: 126 F--GPFYLGGVPLNT-STLVRGNLGLNDTFVGCLR--NLKSNNKLVQDKHTSSGVIP--C 178
F Y G+P S L++ +N GC+R NL L K G C
Sbjct: 420 FLDTKIYFAGLPRKVESALIKP---INPRLDGCIRGWNLMKQGALGA-KEIVEGKQNKHC 475
Query: 179 SDKTESGVFFYNSGGYVKGVEQFRV----GREMELKMDVKPRNISGLLLSVHSKKDY-FI 233
E G ++ SG ++ V G ++ + ++++P +G++L++ S F
Sbjct: 476 FLTVEKGSYYPGSGIAQFSIDYNNVTNAEGWQINVTLNIRPSTGTGVMLALVSGDTVPFA 535
Query: 234 LQMID-GS 240
L ++D GS
Sbjct: 536 LSLVDSGS 543
>UNIPROTKB|Q9UHC6 [details] [associations]
symbol:CNTNAP2 "Contactin-associated protein-like 2"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0071205 "protein localization to juxtaparanode
region of axon" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0019226 "transmission of nerve impulse"
evidence=NAS] [GO:0008038 "neuron recognition" evidence=NAS]
[GO:0021987 "cerebral cortex development" evidence=IEP] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0071625 "vocalization behavior" evidence=IMP]
[GO:0021756 "striatum development" evidence=IEP] [GO:0021794
"thalamus development" evidence=IEP] [GO:0007610 "behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0030673
"axolemma" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
[GO:0005769 "early endosome" evidence=IDA] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043204 "perikaryon" evidence=ISS] [GO:0030424 "axon"
evidence=ISS] [GO:0071109 "superior temporal gyrus development"
evidence=IEP] [GO:0007420 "brain development" evidence=TAS]
[GO:0008076 "voltage-gated potassium channel complex" evidence=IDA]
[GO:0045163 "clustering of voltage-gated potassium channels"
evidence=ISS] [GO:0021761 "limbic system development" evidence=IEP]
[GO:0044224 "juxtaparanode region of axon" evidence=ISS]
[GO:0034613 "cellular protein localization" evidence=ISS]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00008 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0005794
GO:GO:0007165 GO:GO:0009986 GO:GO:0034613 GO:GO:0030425
GO:GO:0043204 GO:GO:0007155 GO:GO:0030673 GO:GO:0008076
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0019226 PROSITE:PS01186
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0031175 GO:GO:0005769 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 EMBL:CH471146 GO:GO:0008038
Orphanet:106 GO:GO:0021756 Pfam:PF02210 InterPro:IPR003585
SMART:SM00294 HOVERGEN:HBG057718 GO:GO:0044224 GO:GO:0045163
eggNOG:NOG291100 HOGENOM:HOG000230964 EMBL:AF193613 EMBL:AF319045
EMBL:AF318292 EMBL:AF318298 EMBL:AB020675 EMBL:CR933671
EMBL:BC093780 EMBL:BC113373 IPI:IPI00029343 IPI:IPI00646209
RefSeq:NP_054860.1 UniGene:Hs.655684 ProteinModelPortal:Q9UHC6
SMR:Q9UHC6 IntAct:Q9UHC6 MINT:MINT-241211 STRING:Q9UHC6
PhosphoSite:Q9UHC6 DMDM:17433089 PaxDb:Q9UHC6 PRIDE:Q9UHC6
Ensembl:ENST00000361727 GeneID:26047 KEGG:hsa:26047 UCSC:uc003weu.2
UCSC:uc003wev.2 CTD:26047 GeneCards:GC07P145863 HGNC:HGNC:13830
HPA:HPA002739 MIM:604569 MIM:610042 MIM:612100 neXtProt:NX_Q9UHC6
Orphanet:163681 Orphanet:221150 PharmGKB:PA26692 InParanoid:Q9UHC6
KO:K07380 OMA:TSQKCDE OrthoDB:EOG4RV2QH ChiTaRS:CNTNAP2
GenomeRNAi:26047 NextBio:47891 ArrayExpress:Q9UHC6 Bgee:Q9UHC6
CleanEx:HS_CNTNAP2 Genevestigator:Q9UHC6 GO:GO:0021761
GO:GO:0071205 GO:GO:0071109 GO:GO:0021794 GO:GO:0071625
Uniprot:Q9UHC6
Length = 1331
Score = 139 (54.0 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 76/327 (23%), Positives = 137/327 (41%)
Query: 23 RFKNKF-----D-FSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS--- 73
RF+NK D +++ KT SE +G+I + + + DY+ L +K ++ S N GS
Sbjct: 199 RFRNKKMKTLKDVIALNFKT-SESEGVILH-GEGQQGDYITLELKKAKLVLSLNLGSNQL 256
Query: 74 GPM----ALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPF 129
GP+ ++ +G L+ D WH+V RQ S L +D + + + G L++
Sbjct: 257 GPIYGHTSVMTGS-LLDDHHWHSVVIERQGRSINLTLD-RSMQHFRTNGEFDYLDLDYEI 314
Query: 130 YLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQD-----KHTSSGV----IPCSD 180
GG+P + + + F GC+ ++ N + D K S V C +
Sbjct: 315 TFGGIPFSG----KPSSSSRKNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVE 370
Query: 181 KTESGVFFYNSGGYVKGVEQFRVGREM-ELKMDVKPRNISGLLLSVHSKKDY--FILQMI 237
VFF N+ Y++ R+ +++ + + N +GLL+ H + + +
Sbjct: 371 PYTVPVFF-NATSYLE--VPGRLNQDLFSVSFQFRTWNPNGLLVFSHFADNLGNVEIDLT 427
Query: 238 DGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGP 297
+ V ++ + +S I S DGQWH + + +N + +D
Sbjct: 428 ESKVGVHINITQTKMSQIDISSGSGLN-DGQWHEVRFLAKENFAILTIDGDEASAVRTNS 486
Query: 298 PGSSETDTNNAVFIGGHPFLSLSSKKS 324
P + T F GG FL+ + S
Sbjct: 487 P--LQVKTGEKYFFGG--FLNQMNNSS 509
Score = 93 (37.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 17 YPTITGRF-KNKFDFSIDIKTTSEQDGIIF-YVADVKHIDYVALYVKDGQIHYSFNCGSG 74
Y + GR ++ F S +T + ++F + AD ++ V + + + ++ N
Sbjct: 383 YLEVPGRLNQDLFSVSFQFRTWNPNGLLVFSHFAD--NLGNVEIDLTESKVGVHINITQT 440
Query: 75 PMA---LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
M+ +SSG L DG+WH V F ++ L IDG A S + ++
Sbjct: 441 KMSQIDISSGSGLN-DGQWHEVRFLAKENFAILTIDGDE-ASAVRTNSPLQVKTGEKYFF 498
Query: 132 GGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV 166
GG LN ++ L +F GC++ ++ +++LV
Sbjct: 499 GGF-LNQMNNSSHSV-LQPSFQGCMQLIQVDDQLV 531
Score = 90 (36.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 32/145 (22%), Positives = 57/145 (39%)
Query: 172 SSGVIPCS-DKTE-SGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKK 229
S G + C D+ + F N Y+ F+ ++ K G+ L K+
Sbjct: 785 SVGPLRCQGDRNYWNAASFPNPSSYLH-FSTFQGETSADISFYFKTLTPWGVFLENMGKE 843
Query: 230 DYFILQMIDGS-VKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSM 288
D+ L++ + V + D G GP+ + P D QWH + A + S+ VD +
Sbjct: 844 DFIKLELKSATEVSFSFDVGNGPVEIVVRSPTP--LNDDQWHRVTAERNVKQASLQVDRL 901
Query: 289 TTDKPGLGPPGSSETDTNNAVFIGG 313
G + + + +F+GG
Sbjct: 902 PQQIRKAPTEGHTRLELYSQLFVGG 926
>UNIPROTKB|F1NDL6 [details] [associations]
symbol:F1NDL6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005769 "early endosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008076
"voltage-gated potassium channel complex" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0021761 "limbic system development" evidence=IEA] [GO:0021794
"thalamus development" evidence=IEA] [GO:0030673 "axolemma"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0044224 "juxtaparanode region of axon"
evidence=IEA] [GO:0071109 "superior temporal gyrus development"
evidence=IEA] [GO:0071205 "protein localization to juxtaparanode
region of axon" evidence=IEA] [GO:0071625 "vocalization behavior"
evidence=IEA] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00560000076804 OMA:TSQKCDE EMBL:AADN02027247
EMBL:AADN02027248 EMBL:AADN02027249 EMBL:AADN02027250
EMBL:AADN02027251 EMBL:AADN02027252 EMBL:AADN02027253
EMBL:AADN02027254 EMBL:AADN02027255 EMBL:AADN02027256
EMBL:AADN02027257 EMBL:AADN02027258 EMBL:AADN02027259
EMBL:AADN02027260 EMBL:AADN02027261 EMBL:AADN02027262
EMBL:AADN02027263 EMBL:AADN02027264 EMBL:AADN02027265
EMBL:AADN02027266 EMBL:AADN02027267 EMBL:AADN02027268
EMBL:AADN02027269 EMBL:AADN02027270 EMBL:AADN02027271
EMBL:AADN02027272 EMBL:AADN02027273 EMBL:AADN02027274
EMBL:AADN02027275 EMBL:AADN02027276 EMBL:AADN02027277
EMBL:AADN02027278 EMBL:AADN02027279 EMBL:AADN02027280
EMBL:AADN02027281 EMBL:AADN02027282 EMBL:AADN02027283
EMBL:AADN02027284 IPI:IPI00590315 Ensembl:ENSGALT00000020230
Uniprot:F1NDL6
Length = 882
Score = 139 (54.0 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 52/201 (25%), Positives = 94/201 (46%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG-QIHYS 68
+ SS + + T G + D S KT S DG+ ++ ++ + D++ L +K ++ +S
Sbjct: 356 TSSSYLHFSTFQG--ETSADISFYFKT-SASDGV--FLENLGNTDFIKLELKSSTEVSFS 410
Query: 69 FNCGSGPMALS-SGDKLILDGEWHTVEFSRQQLSGKLKIDG--QVVAEGESKGSSKTLNI 125
F+ G+GP+ + + D +WH V R L++D V + ++G ++ L +
Sbjct: 411 FDVGNGPVEIIVQSPNQLNDDQWHRVSAERNVKQASLQVDQLPPEVRKAPTEGHTR-LEL 469
Query: 126 FGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNN---KLVQDKHTSSGVIP-CSDK 181
+ Y+G G G F+GC+R+L+ N L + + GV P CS
Sbjct: 470 YSQLYVGAAG--------GQQG----FLGCIRSLRMNGITLDLEERAKVTLGVKPGCSGH 517
Query: 182 -TESGVFFYNSGGYVKGVEQF 201
T G++ N G K VE++
Sbjct: 518 CTSYGMYCANGG---KCVEKY 535
Score = 42 (19.8 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 25/118 (21%), Positives = 44/118 (37%)
Query: 198 VEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGKGPISAIYT 257
V + +E EL +LL + S F+ ++ S + G Y
Sbjct: 595 VTSHNLNKE-ELSFSFSTTKSPCVLLYISSYTQDFMAVLVKPSGNLQIRYSLGGTKEPYN 653
Query: 258 PS-DPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNN--AVFIG 312
D +GQ HT+ + + I + +D L P +S+ N+ A+F+G
Sbjct: 654 IDVDHRNMANGQPHTVNITRNERDIILQIDHYPPATYSL--PAASDIQFNSPKALFLG 709
Score = 37 (18.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 8/39 (20%), Positives = 19/39 (48%)
Query: 181 KTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRNIS 219
K + ++ YN+ G+ + + + + LK ++ N S
Sbjct: 716 KIDQDIYKYNTPGFTGCLSRVQFNQIAPLKAALRSTNTS 754
>WB|WBGene00003772 [details] [associations]
symbol:nlr-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000742
Pfam:PF00008 PROSITE:PS50026 SMART:SM00181 InterPro:IPR000152
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 Pfam:PF02210 eggNOG:NOG291100
GeneTree:ENSGT00560000076996 EMBL:Z69636 PIR:T21133
RefSeq:NP_502312.2 ProteinModelPortal:Q19617 SMR:Q19617
DIP:DIP-26832N MINT:MINT-1073700 EnsemblMetazoa:F20B10.1
GeneID:178167 KEGG:cel:CELE_F20B10.1 UCSC:F20B10.1 CTD:178167
WormBase:F20B10.1 HOGENOM:HOG000017890 InParanoid:Q19617
OMA:SGHISAY NextBio:899994 Uniprot:Q19617
Length = 1180
Score = 138 (53.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 61/256 (23%), Positives = 113/256 (44%)
Query: 40 QDGIIFY-VADVKHIDYVALYVKDGQIHYSFNCGS-GPMALSSGDKLILDGEWHTVEFSR 97
+ G+ F+ +AD D + + G +H F+ GS P +S+G K + DG WH + +
Sbjct: 158 RSGVFFFSMADQG--DVLIAQIIHGTVHVIFDFGSLTPSRISAG-KALDDGRWHEMRWLH 214
Query: 98 QQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLR 157
Q S +L IDG ++ + G + L++ ++GG P N + G+ TF GC+
Sbjct: 215 QFDSVQLSIDGVLLNQTAPTGLYRKLDLHSVVHIGGRP-NDDF----SQGIETTFTGCIA 269
Query: 158 NLKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPRN 217
L+ NN + + C +NS + V F + + P
Sbjct: 270 RLQLNNADLLQLSPNEVHNQCQMPKPPSFTLHNSS---RAVLPFTF-LPFSFEFRIVP-- 323
Query: 218 ISGLLLSVHSKKDYFILQM-IDGSVKA-TVDNGKGPISAIYTPSDPYF-FCDGQWHTIVA 274
I+G L+++ ++ ++ + ID K V N I+ ++P DG WH+ +
Sbjct: 324 INGPLVTLFDAENGTLVDVVIDEESKLHLVSN----ITKFKQAANPAIDVADGAWHSF-S 378
Query: 275 IKTKNV-ISVAVDSMT 289
++ + V + + +D T
Sbjct: 379 LRIRGVRMEIDIDGYT 394
>MGI|MGI:3664583 [details] [associations]
symbol:Cntnap5b "contactin associated protein-like 5B"
species:10090 "Mus musculus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000421
InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 SMART:SM00231
MGI:MGI:3664583 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210 HOVERGEN:HBG057718
eggNOG:NOG291100 HOGENOM:HOG000230964 GeneTree:ENSGT00560000076804
EMBL:AC102217 EMBL:AC135080 EMBL:AC157363 EMBL:AC158402
EMBL:AC161355 EMBL:AC163496 EMBL:AK082656 EMBL:AM076974
EMBL:BN000866 IPI:IPI00225637 IPI:IPI00886071 RefSeq:NP_766439.2
UniGene:Mm.251301 ProteinModelPortal:Q0V8T8 SMR:Q0V8T8 PaxDb:Q0V8T8
PRIDE:Q0V8T8 DNASU:241175 Ensembl:ENSMUST00000086738 GeneID:241175
KEGG:mmu:241175 UCSC:uc007cfy.1 UCSC:uc007cfz.1 CTD:241175
InParanoid:Q0V8T8 OMA:NTENFAN OrthoDB:EOG4RFKVD NextBio:384915
Bgee:Q0V8T8 CleanEx:MM_CNTNAP5B Genevestigator:Q0V8T8
Uniprot:Q0V8T8
Length = 1292
Score = 138 (53.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 73/304 (24%), Positives = 127/304 (41%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD------KL 84
I +K S Q DG++F+ + + D++ L +++G++ N LSS L
Sbjct: 205 ISLKFKSMQGDGVLFH-GEGQRGDHITLELQNGRLALYLNLDDSKARLSSITPSAILGSL 263
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
+ D WH+V R +D + G + L+I GG+P+ + G
Sbjct: 264 LDDQHWHSVLLERVGKQANFTVDRNT-QHFRTNGDTDALDIDYELSFGGIPVPSKP---G 319
Query: 145 NLGLNDTFVGCLRNLKSNNKLVQD-----KHTS-SGVIP--CSDKTESGVFFYNS-GGYV 195
L F GC+ NL N + D KH SG + CS+ + F NS Y+
Sbjct: 320 TF-LKKNFQGCIENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQIVPITFVNSRSSYL 378
Query: 196 --KGVEQFRVGREMELKMDVKPRNISGLLLSVH-SKKDYFILQMIDG-SVKATVDNGKGP 251
G Q G + + + N GLLLS S+ +L +++G +++ + N G
Sbjct: 379 LLPGTPQID-G--LSVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKNVAGH 435
Query: 252 ISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFI 311
+ T +GQWH++ +N +++ +D+ P L P + + + +
Sbjct: 436 GTESLTGRS---LNNGQWHSVNINARRNRVTLTLDNDPAS-PALETPWL-QIYSGYSYYF 490
Query: 312 GGHP 315
GG P
Sbjct: 491 GGCP 494
>UNIPROTKB|H7BZC7 [details] [associations]
symbol:NRXN2 "Neurexin-2" species:9606 "Homo sapiens"
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0007416
"synapse assembly" evidence=IEA] InterPro:IPR027160
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 EMBL:AP001462 HGNC:HGNC:8009 ChiTaRS:NRXN2
PANTHER:PTHR10127:SF307 EMBL:AP001092 ProteinModelPortal:H7BZC7
Ensembl:ENST00000442300 Bgee:H7BZC7 Uniprot:H7BZC7
Length = 293
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 37 TSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLILDGEWHTVE 94
T +++G++ + K DYV L +K G + N GSG AL + D WH V
Sbjct: 91 TLQRNGLMLHTG--KSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVR 148
Query: 95 FSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVG 154
+R + +DG + G ++ L FY+GG P NT+ L G+ +++ F+G
Sbjct: 149 VTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSP-NTADLP-GS-PVSNNFMG 205
Query: 155 CLRNL--KSNN-KLVQDKHTSSG 174
CL+++ K+N+ KL + G
Sbjct: 206 CLKDVVYKNNDFKLELSRLAKEG 228
>UNIPROTKB|F1RN32 [details] [associations]
symbol:F1RN32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000669 "negative regulation of dendritic cell
apoptotic process" evidence=IEA] [GO:2000510 "positive regulation
of dendritic cell chemotaxis" evidence=IEA] [GO:2000352 "negative
regulation of endothelial cell apoptotic process" evidence=IEA]
[GO:2000270 "negative regulation of fibroblast apoptotic process"
evidence=IEA] [GO:1900165 "negative regulation of interleukin-6
secretion" evidence=IEA] [GO:1900142 "negative regulation of
oligodendrocyte apoptotic process" evidence=IEA] [GO:0097241
"hematopoietic stem cell migration to bone marrow" evidence=IEA]
[GO:0097028 "dendritic cell differentiation" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEA] [GO:0071307 "cellular response to vitamin K"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0070168 "negative regulation of
biomineral tissue development" evidence=IEA] [GO:0060090 "binding,
bridging" evidence=IEA] [GO:0051897 "positive regulation of protein
kinase B signaling cascade" evidence=IEA] [GO:0050766 "positive
regulation of phagocytosis" evidence=IEA] [GO:0050711 "negative
regulation of interleukin-1 secretion" evidence=IEA] [GO:0048146
"positive regulation of fibroblast proliferation" evidence=IEA]
[GO:0048018 "receptor agonist activity" evidence=IEA] [GO:0046827
"positive regulation of protein export from nucleus" evidence=IEA]
[GO:0046813 "virion attachment, binding of host cell surface
receptor" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043277 "apoptotic cell clearance"
evidence=IEA] [GO:0043027 "cysteine-type endopeptidase inhibitor
activity involved in apoptotic process" evidence=IEA] [GO:0035754
"B cell chemotaxis" evidence=IEA] [GO:0035690 "cellular response to
drug" evidence=IEA] [GO:0035457 "cellular response to
interferon-alpha" evidence=IEA] [GO:0033159 "negative regulation of
protein import into nucleus, translocation" evidence=IEA]
[GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IEA] [GO:0032825 "positive regulation of
natural killer cell differentiation" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032715 "negative regulation of interleukin-6
production" evidence=IEA] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=IEA] [GO:0031589
"cell-substrate adhesion" evidence=IEA] [GO:0030971 "receptor
tyrosine kinase binding" evidence=IEA] [GO:0030296 "protein
tyrosine kinase activator activity" evidence=IEA] [GO:0019079
"viral genome replication" evidence=IEA] [GO:0019064 "viral entry
into host cell via membrane fusion with the plasma membrane"
evidence=IEA] [GO:0018105 "peptidyl-serine phosphorylation"
evidence=IEA] [GO:0010934 "macrophage cytokine production"
evidence=IEA] [GO:0010804 "negative regulation of tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0009267
"cellular response to starvation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007167 "enzyme linked receptor
protein signaling pathway" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005245 "voltage-gated calcium channel activity" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001786 "phosphatidylserine binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000294
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00594 Pfam:PF07645 PRINTS:PR00001 PROSITE:PS00011
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50998 SMART:SM00069
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0045892 GO:GO:0001764 GO:GO:0046827 GO:GO:0005615
GO:GO:0071363 GO:GO:0032689 GO:GO:0007596 GO:GO:0070374
GO:GO:0005509 GO:GO:0018105 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030296 GO:GO:0050766 GO:GO:0046813
GO:GO:0035690 GO:GO:0032720 GO:GO:0032715 GO:GO:0009267
PROSITE:PS01186 GO:GO:0001786 GO:GO:0051897 GO:GO:0010804
GO:GO:0010628 GO:GO:0043433 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0048146
GO:GO:0033138 GO:GO:0043491 GO:GO:0031589 GO:GO:2000352
GO:GO:0072661 GO:GO:0060090 GO:GO:0043027 GO:GO:0097028
GO:GO:2000510 GO:GO:1900165 GO:GO:0005245 Pfam:PF02210
GO:GO:0043277 GO:GO:0019079 GO:GO:0071307 GO:GO:0035754
GO:GO:0019064 Gene3D:4.10.740.10 InterPro:IPR017857 SUPFAM:SSF57630
GO:GO:0032825 GO:GO:0035457 GO:GO:0007167 GO:GO:0097241
GO:GO:0010934 GO:GO:0070168 GO:GO:2000669 GO:GO:2000270
GO:GO:0050711 GO:GO:1900142 GO:GO:0033159 GO:GO:0001961
GeneTree:ENSGT00530000063339 OMA:DGCMRSW EMBL:FP236199
ProteinModelPortal:F1RN32 Ensembl:ENSSSCT00000010486
ArrayExpress:F1RN32 Uniprot:F1RN32
Length = 666
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 68/320 (21%), Positives = 128/320 (40%)
Query: 18 PTITGRFKN----KFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
P I RFK + D +T + +G++F+ + ++ L ++ G++
Sbjct: 295 PVIRLRFKRLQPTRLVAEFDFRTF-DPEGVLFFAGGRQDSTWIVLGLRAGRLELQLRYQG 353
Query: 74 GPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL-- 131
SSG +I G W T+ + + +K++ V + G L+ G ++L
Sbjct: 354 VGRVTSSGP-VINHGVWQTISVEELERNLVVKVNRDAVMKIAVAGELFQLDR-GLYHLNL 411
Query: 132 --GGVPLNTSTLVRGNLGLNDTFVGCLRN---LKSNNKLVQDKHTSSGVIPCSDKTESGV 186
GG+P LV+ +N GC+R+ L + +Q+ + + C TE G
Sbjct: 412 TVGGIPFKEKDLVQP---MNPRLDGCMRSWNWLNGEDTTIQETVRVNAKMQCFSLTERGS 468
Query: 187 FFYNSGGYVKGVEQFR----VGRE----MELKMDVKPRNISGLLLSVHSKKDYFILQMID 238
FF +G + ++ R +G E +E ++P +G+LL++ +L +
Sbjct: 469 FFPGTGFALYSLDYARTSPDIGAETFWEVEAVARIRPATDTGVLLALVGGDQAVVLSVAL 528
Query: 239 GSVKATVDNGKGPI----SAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPG 294
+T K + ++ CDGQ H + K+ ++ VD T +
Sbjct: 529 VDYHSTKKLKKQLVVLAAESVTLALMEIKVCDGQEHVVTVSVNKDEATLEVDG-TRGQRD 587
Query: 295 LGPPGSSETDTNNAVFIGGH 314
+ P G E V +G H
Sbjct: 588 VSPAGLQE----RLVLLGRH 603
>UNIPROTKB|F1PSS8 [details] [associations]
symbol:PROS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000294
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00594 Pfam:PF07645 PRINTS:PR00001
PROSITE:PS00011 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50998
SMART:SM00069 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210
Gene3D:4.10.740.10 InterPro:IPR017857 SUPFAM:SSF57630
GeneTree:ENSGT00530000063339 OMA:WNMVSVE EMBL:AAEX03016891
EMBL:AAEX03016890 Ensembl:ENSCAFT00000014302 Uniprot:F1PSS8
Length = 679
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 52/201 (25%), Positives = 85/201 (42%)
Query: 14 RIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
+ P IT RF +FDF T + +G+I Y + + + ++DG+I F
Sbjct: 314 KFRLPEIT-RFSAEFDFR-----TYDSEGVILYAESLDRSAWFLIALRDGKIEIQFK-NE 366
Query: 74 GPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSS-KTLNIF--GPFY 130
+++G K I +G W+TV + S +KI + V G K N F Y
Sbjct: 367 FTTKITTGGKAINNGLWNTVSVEELEYSISIKIAKEAVMNINKPGRLFKPSNGFLETKVY 426
Query: 131 LGGVPLNT-STLVRGNLGLNDTFVGCLR--NLKSNN-----KLVQDKHTSSGVIPCSDKT 182
G+P + L+R +N GC+R NL + +++Q+K C
Sbjct: 427 FAGLPRKVENVLIRP---INPRLDGCIRGWNLMNQGASGVKEIIQEKQNKH----CLVTV 479
Query: 183 ESGVFFYNSGGYVKGVEQFRV 203
E G ++ SG V G++ V
Sbjct: 480 EKGSYYPGSGVAVFGIDYILV 500
>UNIPROTKB|F1NXZ3 [details] [associations]
symbol:FAT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00181 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 EMBL:AADN02004863
EMBL:AADN02004864 EMBL:AADN02004865 EMBL:AADN02004866
EMBL:AADN02004867 EMBL:AADN02004868 EMBL:AADN02004869
EMBL:AADN02004870 EMBL:AADN02004871 IPI:IPI00595688
Ensembl:ENSGALT00000027850 Uniprot:F1NXZ3
Length = 4029
Score = 140 (54.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 46/187 (24%), Positives = 87/187 (46%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
G + +S I+Y K +F ++ ++T + +GII Y + + L + DG++ +
Sbjct: 3761 GFAGNSYIKYRVSENSKKEEFKLALRLRTL-QSNGIIMYT---RANPCIILKIVDGKLWF 3816
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
+CG+GP L + + DG WH+V + L +D V ++ +TL+
Sbjct: 3817 QLDCGTGPGILGISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRKAPLYFQTLSTDS 3876
Query: 128 PFYLGG-VPL-NTSTLV-RGNLGLNDTFVGCLRNLK-SNNKL-VQDKHTSSGVIPCSDKT 182
Y G V + N +L + + F GCL ++ +NN+L +Q+K +S + +
Sbjct: 3877 SVYFGAQVQVDNVRSLTDKRTTQVLSGFQGCLDSVVLNNNELPLQNKRSSFAEVVGLTEL 3936
Query: 183 ESGVFFY 189
+ G Y
Sbjct: 3937 KLGCVLY 3943
>UNIPROTKB|H3BLY1 [details] [associations]
symbol:CNTNAP3B "Contactin-associated protein-like 3B"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Gene3D:3.90.215.10 InterPro:IPR014716 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 EMBL:BX649569 EMBL:BX664735
EMBL:CR788268 HGNC:HGNC:32035 ProteinModelPortal:H3BLY1
PRIDE:H3BLY1 Ensembl:ENST00000377561 Uniprot:H3BLY1
Length = 1176
Score = 103 (41.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 43/171 (25%), Positives = 75/171 (43%)
Query: 9 TSKSSRIEYPTITGRF-KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
T SSR Y + G ++K + +T + ++F +V L++KDG++
Sbjct: 422 TFLSSR-SYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV-LFLKDGKLKL 479
Query: 68 S-FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIF 126
S F G P +++G L DG+WH+V FS + + +D + + ++
Sbjct: 480 SLFQAGQSPRNVTAGAGLN-DGQWHSVSFSAKWSHMNVVVDDDTAVQPLV---AVLIDSG 535
Query: 127 GPFYLGGVPLNTS-TLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVI 176
+Y GG N+S + + LG F GCLR + +K V G +
Sbjct: 536 DTYYFGGCLGNSSGSGCKSPLG---GFQGCLRLITIGDKAVDPILVQQGAL 583
Score = 79 (32.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 219 SGLLLSVHSKKDYFILQM-IDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKT 277
SG+ + D+ +++ V + D G GP T P F D QWH + A +
Sbjct: 876 SGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEV--TVQSPTPFNDNQWHHVRAERN 933
Query: 278 KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
S+ VD + G N+ +FIGG
Sbjct: 934 VKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGG 969
>ZFIN|ZDB-GENE-100922-84 [details] [associations]
symbol:si:dkey-22o22.2 "si:dkey-22o22.2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000233
InterPro:IPR000742 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF01049
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-100922-84 GO:GO:0016021 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 EMBL:BX294187
EMBL:BX324007 EMBL:CU019656 IPI:IPI00896841
Ensembl:ENSDART00000111951 Uniprot:E7F284
Length = 2780
Score = 91 (37.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 33/106 (31%), Positives = 49/106 (46%)
Query: 112 AEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKL--VQDK 169
A GE+ GS + L+++ P LGGV T +L R + FVGC+RNL ++++ +
Sbjct: 2173 ASGETPGSERFLDVYQPLQLGGVK-ETHSLRRSHPHYKG-FVGCMRNLVVDSQVYDLSSA 2230
Query: 170 HTSSGVIPCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKP 215
S P T+ GV +GG GV +G D P
Sbjct: 2231 AESENTAPGCALTD-GVCL-TAGGPSCGVHGRCLGEWGSFSCDCHP 2274
Score = 79 (32.9 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 37 TSEQDGIIFYVADV------KHIDYVALYVKDGQIHYSFNCGSGPMALS-SGDKLILDGE 89
T +G++FY + + D++AL +K+G S N GSG + L S + D
Sbjct: 2069 TEAANGLLFYNGPMGAPQPREKEDFIALELKNGVPVLSVNHGSGTLTLQLSARATVTDRR 2128
Query: 90 WHTVEFSRQQLSGKLKID---GQVVAEGESKG 118
WH ++ S ++ +D G VV E E G
Sbjct: 2129 WHHLDIISDGKSVQMILDHCSGAVVNEVEGLG 2160
Score = 65 (27.9 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 24/104 (23%), Positives = 48/104 (46%)
Query: 213 VKPRNISGLLLSVHSK--KDYFILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWH 270
++ R+ +G LLS+ S+ ++ IL+++DG + + G G S T GQW
Sbjct: 2315 LRTRSSTGTLLSMASRDANEFIILEIVDGYLNVRANLGDGTHSLKLTGQRVNH---GQWV 2371
Query: 271 TIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDT--NNAVFIG 312
I ++ N+ + ++ + G G + ++VF+G
Sbjct: 2372 LISILRHDNIFILRLEQGGGSREVTGVLGQKKEIVVHPSSVFLG 2415
>RGD|1306459 [details] [associations]
symbol:Cntnap4 "contactin associated protein-like 4"
species:10116 "Rattus norvegicus" [GO:0030425 "dendrite"
evidence=ISO] REFSEQ:NM_001107432 Ncbi:NP_001100902
Length = 1310
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 76/316 (24%), Positives = 128/316 (40%)
Query: 32 IDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCG-------SGPMALSSGDK 83
I +K T E DGI+ + A D++ L ++ G++ + G S P+ L+ G
Sbjct: 210 ISLKFKTMESDGILLHRAGPGG-DHITLELRRGKLFLLIHSGEARLTSSSRPINLTLGS- 267
Query: 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR 143
L+ D WH+V R +D + ++G L++ GG+ ++
Sbjct: 268 LLDDQHWHSVLIQRLGKQVNFTVD-EHRRHFHAQGEFNYLDLDYEISFGGISAPAKSV-- 324
Query: 144 GNLGLNDTFVGCLRNLKSNNKLVQD--KHTSSGVIP-------CSDKTESGVFFYNSGGY 194
+L F GCL NL N V K S +I CS + F ++ Y
Sbjct: 325 -SLPYK-YFRGCLENLFYNGVDVIGLAKQHSPQIITMGNTSFSCSQPQSMPLTFLSTRSY 382
Query: 195 VKGVEQFRVGREMELKMDVKPRNISGLLL--SVHSKKDYFILQMIDGSVKATVDN-GKGP 251
+ + + + + N +GLLL + +L + DG +K + GK P
Sbjct: 383 LV-LPASSKEEAISVSFQFRTWNKAGLLLFSELWLMSGSLLLSLSDGRLKLNLHQPGKSP 441
Query: 252 ISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDS-MTTDKPGLGPPGSSETDTNNAVF 310
S I + DGQWH++ +N ++V VD ++ P LGP + ++ +
Sbjct: 442 -SDITAGAG---LDDGQWHSVSLSAKRNHLTVVVDGHISPASPWLGP---EQVNSGGIFY 494
Query: 311 IGGHPFLSLSSKKSGP 326
GG P S S+ P
Sbjct: 495 FGGCPDKSFGSRCKSP 510
Score = 104 (41.7 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 58 LYVKDGQIHYSFNC-GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGES 116
L + DG++ + + G P +++G L DG+WH+V S ++ + +DG +
Sbjct: 423 LSLSDGRLKLNLHQPGKSPSDITAGAGLD-DGQWHSVSLSAKRNHLTVVVDGHISPASPW 481
Query: 117 KGSSKTLNIFGPFYLGGVPLNT-STLVRGNLGLNDTFVGCLRNLKSNNKLV 166
G + +N G FY GG P + + + LG F GC+R + +K+V
Sbjct: 482 LGPEQ-VNSGGIFYFGGCPDKSFGSRCKSPLG---GFQGCMRLISIQDKMV 528
Score = 81 (33.6 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 28/112 (25%), Positives = 48/112 (42%)
Query: 208 ELKMDV----KPRNISGLLLSVHSKKDYFILQMIDGS-VKATVDNGKGPIS-AIYTPSDP 261
EL DV K +SG+ L D+ +++ + V + D G GP ++++P+
Sbjct: 814 ELSADVSFYFKTTALSGVFLENLGITDFIRIELRSPTTVTFSFDVGNGPFELSVHSPTH- 872
Query: 262 YFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
F D QWH + + S+ VD + G N+ +F+GG
Sbjct: 873 --FNDNQWHHVRVERNTKEASLQVDELPPKIQAAPTDGHVLLQLNSQLFVGG 922
Score = 38 (18.4 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 1 MSYYVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQ 40
+S+ I+ +KS + Y G +N F +D+ ++Q
Sbjct: 312 ISFGGISAPAKSVSLPYKYFRGCLENLFYNGVDVIGLAKQ 351
>UNIPROTKB|Q96NU0 [details] [associations]
symbol:CNTNAP3B "Contactin-associated protein-like 3B"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021 GO:GO:0007165
GO:GO:0007155 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406
Pfam:PF02210 EMBL:AK024257 EMBL:AK054645 EMBL:BX649569
EMBL:BX664735 EMBL:CR788268 EMBL:AL353791 IPI:IPI00255103
IPI:IPI00647097 IPI:IPI00895814 IPI:IPI00980464
RefSeq:NP_001188309.1 UniGene:Hs.521495 UniGene:Hs.604441
HSSP:O14786 ProteinModelPortal:Q96NU0 SMR:Q96NU0 PhosphoSite:Q96NU0
DMDM:190358858 PaxDb:Q96NU0 PRIDE:Q96NU0 Ensembl:ENST00000276974
Ensembl:ENST00000341990 Ensembl:ENST00000377564 GeneID:728577
KEGG:hsa:728577 UCSC:uc004abr.1 UCSC:uc004ada.2 CTD:728577
GeneCards:GC09P043624 H-InvDB:HIX0034795 H-InvDB:HIX0035297
HGNC:HGNC:32035 HPA:HPA015604 HPA:HPA047731 neXtProt:NX_Q96NU0
eggNOG:NOG314648 HOVERGEN:HBG057718 InParanoid:Q96NU0 OMA:KEERSSA
GenomeRNAi:728577 NextBio:127623 ArrayExpress:Q96NU0 Bgee:Q96NU0
CleanEx:HS_CNTNAP3B Genevestigator:Q96NU0 Uniprot:Q96NU0
Length = 1288
Score = 103 (41.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 43/171 (25%), Positives = 75/171 (43%)
Query: 9 TSKSSRIEYPTITGRF-KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
T SSR Y + G ++K + +T + ++F +V L++KDG++
Sbjct: 373 TFLSSR-SYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV-LFLKDGKLKL 430
Query: 68 S-FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIF 126
S F G P +++G L DG+WH+V FS + + +D + + ++
Sbjct: 431 SLFQAGQSPRNVTAGAGLN-DGQWHSVSFSAKWSHMNVVVDDDTAVQPLV---AVLIDSG 486
Query: 127 GPFYLGGVPLNTS-TLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVI 176
+Y GG N+S + + LG F GCLR + +K V G +
Sbjct: 487 DTYYFGGCLGNSSGSGCKSPLG---GFQGCLRLITIGDKAVDPILVQQGAL 534
Score = 79 (32.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 219 SGLLLSVHSKKDYFILQM-IDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKT 277
SG+ + D+ +++ V + D G GP T P F D QWH + A +
Sbjct: 827 SGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEV--TVQSPTPFNDNQWHHVRAERN 884
Query: 278 KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
S+ VD + G N+ +FIGG
Sbjct: 885 VKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGG 920
>UNIPROTKB|G5EA25 [details] [associations]
symbol:FAT3 "Protocadherin Fat 3" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:CH471065
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 Pfam:PF02210 EMBL:AP000722
EMBL:AP000805 EMBL:AP002514 EMBL:AP003171 EMBL:AP003718
HGNC:HGNC:23112 ChiTaRS:FAT3 ProteinModelPortal:G5EA25 SMR:G5EA25
Ensembl:ENST00000533797 ArrayExpress:G5EA25 Bgee:G5EA25
Uniprot:G5EA25
Length = 892
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
+S I+Y + F ++ ++T + +GII Y + + L + DG++ + +C
Sbjct: 178 NSYIKYRLSENSKEEDFKLALRLRTL-QSNGIIMYT---RANPCIILKIVDGKLWFQLDC 233
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP L + + DG WH+V + L +D V + +TL+ Y
Sbjct: 234 GSGPGILGISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRAPLYFQTLSTESSIYF 293
Query: 132 GGVP----LNTSTLVRGNLGLNDTFVGCLRN-LKSNNKL-VQDKHTSSGVIPCSDKTESG 185
G + + + T R L+ F GCL + + +NN+L +Q+K +S + + + G
Sbjct: 294 GALVQADNIRSLTDTRVTQVLSG-FQGCLDSVILNNNELPLQNKRSSFAEVVGLTELKLG 352
Query: 186 VFFY 189
Y
Sbjct: 353 CVLY 356
>UNIPROTKB|F1PSE5 [details] [associations]
symbol:F1PSE5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076804 EMBL:AAEX03000623
Ensembl:ENSCAFT00000003391 OMA:FNDDRWH Uniprot:F1PSE5
Length = 1294
Score = 133 (51.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 80/340 (23%), Positives = 137/340 (40%)
Query: 32 IDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSG--P-----MALSSGDK 83
I +K T + DGI+ + + ++ Y+ L + G++ S N G P + L+ G
Sbjct: 212 ISLKFKTRQTDGILLH-REGQNGKYITLELVKGKLILSLNSGHANLPSPDARVTLTLGS- 269
Query: 84 LILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVR 143
L+ D WH+V +D ++KG S L++ GG+P + +
Sbjct: 270 LLDDHHWHSVRIDLLNTQVNFTVDRHT-QHFQAKGKSSYLDLDYEISFGGIPGHRKAVAF 328
Query: 144 GNLGLNDTFVGCLRNLKSNNKLVQD---KHTSSGVI------PCSDKTESGVFFYNSGGY 194
+ F GC NL N + D KH +I CS V F +S Y
Sbjct: 329 PH----KNFDGCFENLYYNGVDIIDLSKKHKPQILIMGNVSFSCSHPQIVPVTFLSSRSY 384
Query: 195 VK--GVEQFRVGRE-MELKMDVKPRNISGLLLSVHSKKDYFILQMI--DGSVKATVDNGK 249
+ GV G + + + + N +GLLL+ + L ++ DG +K ++
Sbjct: 385 LALPGV----AGEDKVSVAFQFRTWNRAGLLLTTQLRHGPGALTLVLDDGKLKLSLSQPG 440
Query: 250 GPISAIYTPSDPYFFCDGQWHTIVAIKTK-NVISVAVDSMTTDKPGLGPPGSSETDTNNA 308
P + + DGQWH +V++ K N +SV VD + + + D+ +
Sbjct: 441 HPARDVTAGAA---LSDGQWH-LVSLSLKGNHLSVMVDG---EAASVAHSLRGKIDSGDT 493
Query: 309 VFIGGHPFLSLSSKKSGPRTKRRSVF-LINANCKAVHPLT 347
++GG P S G + LI+ + V P+T
Sbjct: 494 YYLGGCPDSSSGPGCGGALAGFQGCLRLISIGDQEVDPIT 533
Score = 96 (38.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 38/169 (22%), Positives = 72/169 (42%)
Query: 10 SKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKH-IDYVALYVKDGQIHYS 68
S S + P + G ++K + +T + G++ ++H + L + DG++ S
Sbjct: 380 SSRSYLALPGVAG--EDKVSVAFQFRTWNRA-GLLL-TTQLRHGPGALTLVLDDGKLKLS 435
Query: 69 FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGES-KGSSKTLNIFG 127
+ P + + DG+WH V S + + +DG+ + S +G ++
Sbjct: 436 LSQPGHPARDVTAGAALSDGQWHLVSLSLKGNHLSVMVDGEAASVAHSLRGK---IDSGD 492
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVI 176
+YLGG P ++S G G F GCLR + ++ V G +
Sbjct: 493 TYYLGGCPDSSSGPGCG--GALAGFQGCLRLISIGDQEVDPITVQQGTL 539
Score = 76 (31.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 29/111 (26%), Positives = 44/111 (39%)
Query: 208 ELKMDV----KPRNISGLLLSVHSKKDYFILQM-IDGSVKATVDNGKGPISAIYTPSDPY 262
EL DV K SG+ + D+ L++ V + D G G T P
Sbjct: 817 ELSADVSFFFKTTAPSGVFVENLGITDFIRLELQAPAEVTFSFDVGNGRCEV--TVRSPT 874
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
F D +WH + A + S+ VD + T G + N+ +F+GG
Sbjct: 875 PFNDDRWHHVRAERNVKEASLQVDQLPTRTQPAPADGHARLQLNSQLFVGG 925
>UNIPROTKB|F1NXZ5 [details] [associations]
symbol:FAT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 KO:K16506 CTD:120114
OMA:DNGWMVT EMBL:AADN02004863 EMBL:AADN02004864 EMBL:AADN02004865
EMBL:AADN02004866 EMBL:AADN02004867 EMBL:AADN02004868
EMBL:AADN02004869 EMBL:AADN02004870 EMBL:AADN02004871
IPI:IPI00583549 RefSeq:NP_001104793.1 UniGene:Gga.49207
Ensembl:ENSGALT00000027846 GeneID:395167 KEGG:gga:395167
NextBio:20815258 Uniprot:F1NXZ5
Length = 4557
Score = 137 (53.3 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 45/183 (24%), Positives = 85/183 (46%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
+S I+Y K +F ++ ++T + +GII Y + + L + DG++ + +C
Sbjct: 3844 NSYIKYRVSENSKKEEFKLALRLRTL-QSNGIIMYT---RANPCIILKIVDGKLWFQLDC 3899
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
G+GP L + + DG WH+V + L +D V ++ +TL+ Y
Sbjct: 3900 GTGPGILGISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRKAPLYFQTLSTDSSVYF 3959
Query: 132 GG-VPL-NTSTLV-RGNLGLNDTFVGCLRNLK-SNNKL-VQDKHTSSGVIPCSDKTESGV 186
G V + N +L + + F GCL ++ +NN+L +Q+K +S + + + G
Sbjct: 3960 GAQVQVDNVRSLTDKRTTQVLSGFQGCLDSVVLNNNELPLQNKRSSFAEVVGLTELKLGC 4019
Query: 187 FFY 189
Y
Sbjct: 4020 VLY 4022
>UNIPROTKB|F1MES2 [details] [associations]
symbol:Bt.86327 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
Pfam:PF02210 GeneTree:ENSGT00560000076804 OMA:FHCKKSR
EMBL:DAAA02023308 EMBL:DAAA02023309 EMBL:DAAA02023310
EMBL:DAAA02023311 EMBL:DAAA02023312 EMBL:DAAA02023313
EMBL:DAAA02023314 IPI:IPI00826166 Ensembl:ENSBTAT00000008454
Uniprot:F1MES2
Length = 1280
Score = 131 (51.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 77/323 (23%), Positives = 131/323 (40%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSF 69
KSS + Y T + N I +K T E +GI+ + + + ++ L + G++
Sbjct: 181 KSSLL-Y-TFNHKSMNPIKEVISLKFKTRENNGILLH-REGPNDKHITLELVKGKLILFL 237
Query: 70 NCGSG----PMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNI 125
N G P AL G L+ D WH+V +D +KG S +++
Sbjct: 238 NSGHADLPSPDALMLGS-LLDDEHWHSVLIELLSTDVNFTVDTHT-HHFRAKGESSYVDL 295
Query: 126 FGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQD---KHTSSGVI------ 176
GG+P + ++ + F GC NL N + D KH +I
Sbjct: 296 DYKISFGGIPGHGKSVAFPH----KNFHGCFENLYYNEVDIIDLSKKHKPQVLIMGNVSF 351
Query: 177 PCSDKTESGVFFYNSGGYVKGVEQFRVGREMELKMDVKPR--NISGLLLS--VHSKKDYF 232
CS + F +S Y+ V + RE ++ + + R N +GLLL+ H +
Sbjct: 352 SCSHTQTVPMTFLSSRSYL--VLP-GISREDKVSVIFQFRTWNRAGLLLTSQFHHRSGAL 408
Query: 233 ILQMIDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDK 292
IL + DG +K ++ P I + DGQWH++ N +SV VD +
Sbjct: 409 ILVLSDGKLKLSLSQPGHPARDITAGAG---LNDGQWHSVSLSARGNHLSVMVDG---EA 462
Query: 293 PGLGPPGSSETDTNNAVFIGGHP 315
+ + ++ + ++GG P
Sbjct: 463 ASMAHSLRGQIESGDTYYLGGCP 485
Score = 94 (38.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 58 LYVKDGQIHYSFNCGSGPMA-LSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGES 116
L + DG++ S + P +++G L DG+WH+V S + + +DG+ + S
Sbjct: 410 LVLSDGKLKLSLSQPGHPARDITAGAGLN-DGQWHSVSLSARGNHLSVMVDGEAASMAHS 468
Query: 117 -KGSSKTLNIFGPFYLGGVPLNTSTL-VRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSG 174
+G ++ + + YLGG P N+S +LG F GCLR + ++ V G
Sbjct: 469 LRGQIESGDTY---YLGGCPDNSSHPGCTNSLG---GFQGCLRLISIGDEAVDPISIQQG 522
Query: 175 VI 176
+
Sbjct: 523 AL 524
Score = 77 (32.2 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 29/111 (26%), Positives = 42/111 (37%)
Query: 208 ELKMDV----KPRNISGLLLSVHSKKDYFILQM-IDGSVKATVDNGKGPISAIYTPSDPY 262
EL DV K SG+ L D+ L++ V + D G GP T P
Sbjct: 802 ELSADVSFFFKTTASSGVFLENLGITDFIRLELRAPTEVTFSFDVGNGPCEV--TVQSPT 859
Query: 263 FFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
F D +WH + A + S+ V G + N+ +F+GG
Sbjct: 860 AFNDNRWHHVKADRNIKEASLQVGQHPRKTQPASADGHARLQLNSQLFVGG 910
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 1 MSYYVIAGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQ 40
+S+ I G KS + G F+N + +DI S++
Sbjct: 299 ISFGGIPGHGKSVAFPHKNFHGCFENLYYNEVDIIDLSKK 338
>UNIPROTKB|B1AMA2 [details] [associations]
symbol:CNTNAP3 "Contactin-associated protein-like 3"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 Gene3D:3.90.215.10 InterPro:IPR014716 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210 UniGene:Hs.521495
UniGene:Hs.604441 HOVERGEN:HBG057718 HOGENOM:HOG000230964
EMBL:AL162501 EMBL:AL353729 UniGene:Hs.128474 HGNC:HGNC:13834
IPI:IPI00889519 SMR:B1AMA2 Ensembl:ENST00000358144 Uniprot:B1AMA2
Length = 1039
Score = 98 (39.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 43/171 (25%), Positives = 75/171 (43%)
Query: 9 TSKSSRIEYPTITGRF-KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
T SSR Y + G ++K + +T + ++F +V L++KDG++
Sbjct: 285 TFLSSR-SYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFV-LFLKDGKLKL 342
Query: 68 S-FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIF 126
S F G P +++G L DG+WH+V FS + + +D + + ++
Sbjct: 343 SLFQPGQSPRNVTAGAGLN-DGQWHSVSFSAKWSHMNVVVDDDTAVQPLV---AVLIDSG 398
Query: 127 GPFYLGGVPLNTS-TLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVI 176
+Y GG N+S + + LG F GCLR + +K V G +
Sbjct: 399 DTYYFGGCLDNSSGSGCKSPLG---GFQGCLRLITIGDKAVDPILVQQGAL 446
Score = 79 (32.9 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 219 SGLLLSVHSKKDYFILQM-IDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKT 277
SG+ + D+ +++ V + D G GP T P F D QWH + A +
Sbjct: 739 SGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEV--TVQSPTPFNDNQWHHVRAERN 796
Query: 278 KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
S+ VD + G N+ +FIGG
Sbjct: 797 VKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGG 832
>UNIPROTKB|D4AA49 [details] [associations]
symbol:D4AA49 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754 PROSITE:PS01285
PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181
SMART:SM00231 INTERPRO:IPR002181 GO:GO:0007165 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Gene3D:3.90.215.10
InterPro:IPR014716 SMART:SM00186 SUPFAM:SSF56496 PROSITE:PS51406
Pfam:PF02210 GeneTree:ENSGT00560000076804 OrthoDB:EOG4VMFDJ
IPI:IPI00568482 ProteinModelPortal:D4AA49
Ensembl:ENSRNOT00000046525 ArrayExpress:D4AA49 Uniprot:D4AA49
Length = 1289
Score = 110 (43.8 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 39/169 (23%), Positives = 75/169 (44%)
Query: 9 TSKSSRIEYPTITGRFK-NKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
T +SS Y + G + +K + +T ++ G +F+ + L++ +G++
Sbjct: 378 TFQSSG-SYLALPGSLREDKMSLAFQFRTWNKA-GRVFFSQPEHGSGSLVLFLTNGKLRL 435
Query: 68 SFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFG 127
S + P+ + ++ DG WH+V + + L +DG A+ S +++
Sbjct: 436 SLSEPGQPLQNITTGAVLNDGLWHSVSLTAEGRYLSLVVDGDFSAQALM---SVGIHLGD 492
Query: 128 PFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVI 176
+Y GG P N+S+ G F GCLR + +K+V GV+
Sbjct: 493 TYYFGGCPNNSSS--SGCESPYGGFQGCLRLISIGDKVVDPIAVQQGVL 539
Score = 68 (29.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 23/96 (23%), Positives = 37/96 (38%)
Query: 219 SGLLLSVHSKKDYFILQM-IDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKT 277
SG+ + D+ +++ V + D G GP P F D +WH + A +
Sbjct: 831 SGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCELTVQSLTP--FNDNRWHHVRAERN 888
Query: 278 KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
S+ VD + G N+ +FIGG
Sbjct: 889 VKGASLQVDQLPQKTQPNPADGHVRLQLNSQLFIGG 924
>UNIPROTKB|F1N812 [details] [associations]
symbol:SLC26A6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0008271
"secondary active sulfate transmembrane transporter activity"
evidence=IEA] [GO:0008272 "sulfate transport" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
InterPro:IPR000203 InterPro:IPR000742 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR001902
InterPro:IPR002126 InterPro:IPR011547 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR017983 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF00916 Pfam:PF01825
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0008272 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:DGRRVDM GO:GO:0008271
Gene3D:3.30.750.24 InterPro:IPR002645 SUPFAM:SSF52091
PROSITE:PS50801 Pfam:PF01740 TIGRFAMs:TIGR00815 EMBL:AADN02014037
EMBL:AADN02014038 EMBL:AADN02014039 EMBL:AADN02014040
IPI:IPI00594732 Ensembl:ENSGALT00000009205 ArrayExpress:F1N812
Uniprot:F1N812
Length = 3737
Score = 87 (35.7 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 24/105 (22%), Positives = 50/105 (47%)
Query: 25 KNKFDFSIDIK-TTSEQDGIIFYVADV--KHIDYVALYVKDGQIHYSFNCGSGPMALSSG 81
+ +F ++ + +T E G++ Y + +H D++A+ + GQ+ ++ G +S
Sbjct: 1193 RQRFHLTLSLSFSTVEPGGLLLYNGRLNERH-DFLAVEIIQGQVQLKYSTGESSTVVSPY 1251
Query: 82 -DKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNI 125
+ DG+WHT++ + K K+ V +G SK L +
Sbjct: 1252 LPGGVSDGQWHTLQL---RYYNKPKVSALGVVQGPSKDKVAILTV 1293
Score = 86 (35.3 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 112 AEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDT-FVGCLRNLKSNNKLV 166
AEG S K+L++ GP LGGVP N N ++ FVGC+R+L +NK +
Sbjct: 1315 AEGVQTSSKKSLDLTGPLLLGGVP-NLPE----NFPVSHRDFVGCMRDLYIDNKRI 1365
Score = 61 (26.5 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 209 LKMDVKPRNISGLLLSVHSKKDYFIL-QMIDGSVKATVDNGKGPISAIYTPSDPYFFCDG 267
L + + R + G+LL H+ + +L Q+ G + V G G +++ D DG
Sbjct: 1451 LGLAFRTRQMDGVLLQAHAGQYTTLLCQLSGGLLSFMVSRGSGRSTSLVL--DQLQLNDG 1508
Query: 268 QWHTI 272
+WH +
Sbjct: 1509 RWHDL 1513
>MGI|MGI:3045256 [details] [associations]
symbol:Fat4 "FAT tumor suppressor homolog 4 (Drosophila)"
species:10090 "Mus musculus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 MGI:MGI:3045256 GO:GO:0016021
GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104207
Pfam:PF02210 HSSP:P15116 CTD:79633 HOGENOM:HOG000074162
HOVERGEN:HBG104800 KO:K16669 OMA:GKMCESS OrthoDB:EOG4HDSSK
EMBL:DQ286572 EMBL:AC122841 EMBL:AC161228 EMBL:AK031348
EMBL:AK034552 EMBL:BC079887 IPI:IPI00228716 IPI:IPI00889310
RefSeq:NP_899044.3 UniGene:Mm.316210 ProteinModelPortal:Q2PZL6
SMR:Q2PZL6 IntAct:Q2PZL6 STRING:Q2PZL6 PhosphoSite:Q2PZL6
PaxDb:Q2PZL6 PRIDE:Q2PZL6 Ensembl:ENSMUST00000061260 GeneID:329628
KEGG:mmu:329628 UCSC:uc008pbe.1 UCSC:uc008pbf.1 InParanoid:Q2PZL6
NextBio:398867 Bgee:Q2PZL6 CleanEx:MM_FAT4 Genevestigator:Q2PZL6
Uniprot:Q2PZL6
Length = 4981
Score = 101 (40.6 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 41/171 (23%), Positives = 79/171 (46%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIK-TTSEQDGIIFYVADVK---HIDYVALYVKDG 63
G + S +E+P++ N + I +K T + ++ Y D + +++AL + +
Sbjct: 3981 GFEELSYMEFPSLDPN--NNY---IYVKFATIKSHALLLYNYDNQTGERAEFLALEIAEE 4035
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID--------GQVVAEGE 115
++ +S+N GSG L++ K + DG++HTV R ++ L +D G
Sbjct: 4036 RLRFSYNLGSGTYKLTTMKK-VSDGQFHTVIARRAGMAASLTVDSCSENQEPGYCTVSNV 4094
Query: 116 SKGSSKTLNIF-GPFYLGGV-PLNTSTLVRGNLGLNDTFVGCLRNLKSNNK 164
+ TL++ +GG+ L RG++ +D FVGC+ N +
Sbjct: 4095 AVSDDWTLDVQPNRVTVGGIRSLEPILQRRGHVESHD-FVGCVMEFAVNGR 4144
Score = 88 (36.0 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 198 VEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNG-KGPISAIY 256
+E F V +E+K + N G+L+ + +Y +++ +G V T D G G + I
Sbjct: 4240 LEPFGVN-SLEVKFRTRSEN--GILIHIQESSNYTTVKIKNGKVHFTSDAGVAGKVERII 4296
Query: 257 TPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
+ + DG WHT K ++ ++VD
Sbjct: 4297 PEA---YIADGHWHTFRISKNGSITVLSVD 4323
>UNIPROTKB|G1P9P1 [details] [associations]
symbol:GAS6 "Uncharacterized protein" species:59463 "Myotis
lucifugus" [GO:0001786 "phosphatidylserine binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=ISS] [GO:0003104 "positive regulation
of glomerular filtration" evidence=ISS] [GO:0005102 "receptor
binding" evidence=ISS] [GO:0005245 "voltage-gated calcium channel
activity" evidence=ISS] [GO:0005615 "extracellular space"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006468
"protein phosphorylation" evidence=ISS] [GO:0006909 "phagocytosis"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0010804 "negative regulation of tumor necrosis factor-mediated
signaling pathway" evidence=ISS] [GO:0018105 "peptidyl-serine
phosphorylation" evidence=ISS] [GO:0019064 "viral entry into host
cell via membrane fusion with the plasma membrane" evidence=ISS]
[GO:0019079 "viral genome replication" evidence=ISS] [GO:0030296
"protein tyrosine kinase activator activity" evidence=ISS]
[GO:0032008 "positive regulation of TOR signaling cascade"
evidence=ISS] [GO:0032148 "activation of protein kinase B activity"
evidence=ISS] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=ISS] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=ISS] [GO:0032825 "positive
regulation of natural killer cell differentiation" evidence=ISS]
[GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=ISS] [GO:0033159 "negative regulation of
protein import into nucleus, translocation" evidence=ISS]
[GO:0035457 "cellular response to interferon-alpha" evidence=ISS]
[GO:0035690 "cellular response to drug" evidence=ISS] [GO:0035754
"B cell chemotaxis" evidence=ISS] [GO:0043027 "cysteine-type
endopeptidase inhibitor activity involved in apoptotic process"
evidence=ISS] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0043277 "apoptotic cell clearance" evidence=ISS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0045860 "positive regulation
of protein kinase activity" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046718 "viral entry into host cell" evidence=ISS] [GO:0046813
"virion attachment, binding of host cell surface receptor"
evidence=ISS] [GO:0046827 "positive regulation of protein export
from nucleus" evidence=ISS] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=ISS] [GO:0050711 "negative
regulation of interleukin-1 secretion" evidence=ISS] [GO:0050766
"positive regulation of phagocytosis" evidence=ISS] [GO:0051897
"positive regulation of protein kinase B signaling cascade"
evidence=ISS] [GO:0060090 "binding, bridging" evidence=ISS]
[GO:0061098 "positive regulation of protein tyrosine kinase
activity" evidence=ISS] [GO:0070168 "negative regulation of
biomineral tissue development" evidence=ISS] [GO:0071307 "cellular
response to vitamin K" evidence=ISS] [GO:0071333 "cellular response
to glucose stimulus" evidence=ISS] [GO:0072661 "protein targeting
to plasma membrane" evidence=ISS] [GO:0085029 "extracellular matrix
assembly" evidence=ISS] [GO:0097241 "hematopoietic stem cell
migration to bone marrow" evidence=ISS] [GO:1900142 "negative
regulation of oligodendrocyte apoptotic process" evidence=ISS]
[GO:1900165 "negative regulation of interleukin-6 secretion"
evidence=ISS] [GO:2000270 "negative regulation of fibroblast
apoptotic process" evidence=ISS] [GO:2000352 "negative regulation
of endothelial cell apoptotic process" evidence=ISS] [GO:2000533
"negative regulation of renal albumin absorption" evidence=ISS]
[GO:2000669 "negative regulation of dendritic cell apoptotic
process" evidence=ISS] InterPro:IPR000294 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00594
PRINTS:PR00001 PROSITE:PS00011 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50998 SMART:SM00069 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0045892 GO:GO:0046827
GO:GO:0005615 GO:GO:0032689 GO:GO:0071333 GO:GO:0005102
GO:GO:0005509 GO:GO:0018105 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030296 GO:GO:0050766 GO:GO:0046813
GO:GO:0035690 GO:GO:0032720 PROSITE:PS01186 GO:GO:0032148
GO:GO:0001786 GO:GO:0051897 GO:GO:0010804 GO:GO:0010628
GO:GO:0043433 InterPro:IPR001791 Pfam:PF00054 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0048146 GO:GO:0033138
GO:GO:0043491 GO:GO:2000352 GO:GO:0072661 GO:GO:0060090
GO:GO:0043027 InterPro:IPR026823 Pfam:PF12662 GO:GO:1900165
GO:GO:0005245 Pfam:PF02210 GO:GO:0043277 GO:GO:0019079
GO:GO:0071307 GO:GO:0035754 GO:GO:0019064 Gene3D:4.10.740.10
InterPro:IPR017857 SUPFAM:SSF57630 GO:GO:0032825 GO:GO:0035457
GO:GO:0085029 GO:GO:0097241 GO:GO:0070168 GO:GO:2000669
GO:GO:2000270 GO:GO:0050711 GO:GO:1900142 GO:GO:0033159
GO:GO:2000533 GO:GO:0001961 GO:GO:0003104 GO:GO:0032008
GeneTree:ENSGT00530000063339 OMA:DGCMRSW EMBL:AAPE02044197
EMBL:AAPE02044198 EMBL:AAPE02044199 ProteinModelPortal:G1P9P1
Ensembl:ENSMLUT00000007623 Uniprot:G1P9P1
Length = 670
Score = 126 (49.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 63/283 (22%), Positives = 115/283 (40%)
Query: 23 RFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD 82
R +FDF T + +GI+F+ + +++ L ++ G++ SSG
Sbjct: 309 RLVAEFDFR-----TFDPEGILFFAGGHQGSNWIVLGLRAGRLELQLRYHGVGRVTSSGP 363
Query: 83 KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL----GGVPLNT 138
+I G W TV + S +K++ V + G + G ++L GG+P
Sbjct: 364 -IINHGMWQTVSIEELEQSLVIKVNKDAVMKIVVAGDLFQ-QVRGLYHLNLTVGGIPFKE 421
Query: 139 STLVRGNLGLNDTFVGCLRN---LKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYV 195
LV+ +N GC+R+ + + +Q+ + + C TE G F+ SG
Sbjct: 422 KDLVQP---INPRLDGCMRSWNLMNGEDTTIQETVKMNTKMQCFSVTEKGSFYPGSGFAF 478
Query: 196 KGVEQFR----VGRE----MELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDN 247
++ R VG E +E+ ++P +G+L ++ L + +T
Sbjct: 479 YSLDYARTSPDVGTETTWEIEVMARIRPATDTGVLFALVGDNHTVTLSVALVDYHSTKKL 538
Query: 248 GKG-PISAIYTPSDPYF---FCDGQWHTIVAIKTKNVISVAVD 286
K I A+ + CD Q H + TK +++AVD
Sbjct: 539 KKQLVILAVENVTLALMEIKVCDSQEHVVTISVTKEGVTLAVD 581
>UNIPROTKB|F1SQJ0 [details] [associations]
symbol:LOC100519087 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] [GO:0007416 "synapse assembly"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] InterPro:IPR027158 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 Pfam:PF02210
GeneTree:ENSGT00560000076996 PANTHER:PTHR10127:SF309 EMBL:FP236368
Ensembl:ENSSSCT00000009219 OMA:EHARDEN Uniprot:F1SQJ0
Length = 163
Score = 111 (44.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 40/139 (28%), Positives = 70/139 (50%)
Query: 29 DFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPM-ALSSG-DKLIL 86
+ ++ KT +++G++ + K DYV L +K+G + N GSG AL +
Sbjct: 30 EITLSFKTL-QRNGLMLHTG--KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN 86
Query: 87 DGEWHTVEFSR--QQLSG------KLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNT 138
D WH V+ +R +Q SG + +DG + G ++ L FY+GG P +T
Sbjct: 87 DNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP-ST 145
Query: 139 STLVRGNLGLNDTFVGCLR 157
+ L G+ +++ F+GCL+
Sbjct: 146 ADLP-GS-PVSNNFMGCLK 162
>UNIPROTKB|Q9BZ76 [details] [associations]
symbol:CNTNAP3 "Contactin-associated protein-like 3"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008037 "cell
recognition" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=NAS] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181 GO:GO:0016021
GO:GO:0005886 GO:GO:0007165 GO:GO:0005576 GO:GO:0007155
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 Gene3D:3.90.215.10 InterPro:IPR014716 SMART:SM00186
SUPFAM:SSF56496 PROSITE:PS00514 PROSITE:PS51406 Pfam:PF02210
GO:GO:0008037 UniGene:Hs.521495 UniGene:Hs.604441 HPA:HPA015604
HPA:HPA047731 eggNOG:NOG314648 HOVERGEN:HBG057718
HOGENOM:HOG000230964 EMBL:AF333769 EMBL:AB051501 EMBL:AL162501
EMBL:AL353729 IPI:IPI00001245 IPI:IPI00645313 RefSeq:NP_387504.2
UniGene:Hs.128474 ProteinModelPortal:Q9BZ76 SMR:Q9BZ76
STRING:Q9BZ76 PhosphoSite:Q9BZ76 DMDM:209572752 PaxDb:Q9BZ76
PRIDE:Q9BZ76 Ensembl:ENST00000297668 GeneID:79937 KEGG:hsa:79937
UCSC:uc004abi.3 UCSC:uc004abk.1 CTD:79937 GeneCards:GC09M039064
H-InvDB:HIX0008061 HGNC:HGNC:13834 MIM:610517 neXtProt:NX_Q9BZ76
PharmGKB:PA134963289 InParanoid:Q9BZ76 OMA:FHCKKSR
OrthoDB:EOG4VMFDJ PhylomeDB:Q9BZ76 GenomeRNAi:79937 NextBio:69878
ArrayExpress:Q9BZ76 Bgee:Q9BZ76 CleanEx:HS_CNTNAP3
Genevestigator:Q9BZ76 GermOnline:ENSG00000106714 Uniprot:Q9BZ76
Length = 1288
Score = 98 (39.6 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 43/171 (25%), Positives = 75/171 (43%)
Query: 9 TSKSSRIEYPTITGRF-KNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHY 67
T SSR Y + G ++K + +T + ++F +V L++KDG++
Sbjct: 373 TFLSSR-SYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFV-LFLKDGKLKL 430
Query: 68 S-FNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIF 126
S F G P +++G L DG+WH+V FS + + +D + + ++
Sbjct: 431 SLFQPGQSPRNVTAGAGLN-DGQWHSVSFSAKWSHMNVVVDDDTAVQPLV---AVLIDSG 486
Query: 127 GPFYLGGVPLNTS-TLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTSSGVI 176
+Y GG N+S + + LG F GCLR + +K V G +
Sbjct: 487 DTYYFGGCLDNSSGSGCKSPLG---GFQGCLRLITIGDKAVDPILVQQGAL 534
Score = 79 (32.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 219 SGLLLSVHSKKDYFILQM-IDGSVKATVDNGKGPISAIYTPSDPYFFCDGQWHTIVAIKT 277
SG+ + D+ +++ V + D G GP T P F D QWH + A +
Sbjct: 827 SGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEV--TVQSPTPFNDNQWHHVRAERN 884
Query: 278 KNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFIGG 313
S+ VD + G N+ +FIGG
Sbjct: 885 VKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGG 920
>RGD|61913 [details] [associations]
symbol:Gas6 "growth arrest specific 6" species:10116 "Rattus
norvegicus" [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0001786 "phosphatidylserine binding" evidence=ISO;ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISO;IDA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=ISO;ISS] [GO:0003104
"positive regulation of glomerular filtration" evidence=IDA]
[GO:0005102 "receptor binding" evidence=ISO;ISS] [GO:0005245
"voltage-gated calcium channel activity" evidence=ISO;ISS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006468
"protein phosphorylation" evidence=ISO;ISS] [GO:0006909
"phagocytosis" evidence=ISO;ISS] [GO:0007165 "signal transduction"
evidence=ISO;IDA] [GO:0007167 "enzyme linked receptor protein
signaling pathway" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA;ISO] [GO:0008083 "growth factor activity" evidence=TAS]
[GO:0009267 "cellular response to starvation" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=ISO;ISS] [GO:0010804 "negative regulation of tumor necrosis
factor-mediated signaling pathway" evidence=ISO;ISS] [GO:0010934
"macrophage cytokine production" evidence=IEA;ISO] [GO:0018105
"peptidyl-serine phosphorylation" evidence=ISO;ISS] [GO:0019064
"viral entry into host cell via membrane fusion with the plasma
membrane" evidence=ISO;ISS] [GO:0019079 "viral genome replication"
evidence=ISO;ISS] [GO:0030296 "protein tyrosine kinase activator
activity" evidence=ISO;ISS] [GO:0030971 "receptor tyrosine kinase
binding" evidence=ISO;TAS] [GO:0031100 "organ regeneration"
evidence=IEP] [GO:0031589 "cell-substrate adhesion"
evidence=IEA;ISO] [GO:0032008 "positive regulation of TOR signaling
cascade" evidence=IDA] [GO:0032148 "activation of protein kinase B
activity" evidence=IDA] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=ISO;ISS] [GO:0032715 "negative
regulation of interleukin-6 production" evidence=IEA;ISO]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=ISO;ISS] [GO:0032825 "positive regulation of
natural killer cell differentiation" evidence=ISO;ISS] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=ISO;ISS] [GO:0033159 "negative regulation of protein import
into nucleus, translocation" evidence=ISO;ISS] [GO:0035457 "cellular
response to interferon-alpha" evidence=ISO;ISS] [GO:0035690
"cellular response to drug" evidence=ISO;IDA] [GO:0035754 "B cell
chemotaxis" evidence=ISO;ISS] [GO:0040008 "regulation of growth"
evidence=IEA] [GO:0042246 "tissue regeneration" evidence=TAS]
[GO:0043027 "cysteine-type endopeptidase inhibitor activity involved
in apoptotic process" evidence=ISO;ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO;ISS] [GO:0043277 "apoptotic cell
clearance" evidence=ISO;ISS] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO;ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0046718 "viral
entry into host cell" evidence=ISO;ISS] [GO:0046813 "virion
attachment, binding of host cell surface receptor" evidence=ISO;ISS]
[GO:0046827 "positive regulation of protein export from nucleus"
evidence=ISO;ISS] [GO:0048018 "receptor agonist activity"
evidence=IEA;ISO] [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=ISO;ISS] [GO:0048771 "tissue remodeling"
evidence=TAS] [GO:0050711 "negative regulation of interleukin-1
secretion" evidence=ISO;ISS] [GO:0050766 "positive regulation of
phagocytosis" evidence=ISO;ISS] [GO:0051897 "positive regulation of
protein kinase B signaling cascade" evidence=ISO;IDA] [GO:0060090
"binding, bridging" evidence=ISO;ISS] [GO:0061098 "positive
regulation of protein tyrosine kinase activity" evidence=ISO;ISS]
[GO:0070168 "negative regulation of biomineral tissue development"
evidence=ISO;ISS] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA;ISO] [GO:0070588 "calcium ion transmembrane
transport" evidence=ISO] [GO:0071307 "cellular response to vitamin
K" evidence=ISO;ISS] [GO:0071333 "cellular response to glucose
stimulus" evidence=IDA] [GO:0071363 "cellular response to growth
factor stimulus" evidence=IEA;ISO] [GO:0072661 "protein targeting to
plasma membrane" evidence=ISO;ISS] [GO:0085029 "extracellular matrix
assembly" evidence=IEP] [GO:0097028 "dendritic cell differentiation"
evidence=IEA;ISO] [GO:0097241 "hematopoietic stem cell migration to
bone marrow" evidence=ISO;ISS] [GO:1900142 "negative regulation of
oligodendrocyte apoptotic process" evidence=ISO;ISS] [GO:1900165
"negative regulation of interleukin-6 secretion" evidence=ISO;ISS]
[GO:2000270 "negative regulation of fibroblast apoptotic process"
evidence=ISO;ISS] [GO:2000352 "negative regulation of endothelial
cell apoptotic process" evidence=ISO;ISS] [GO:2000510 "positive
regulation of dendritic cell chemotaxis" evidence=IEA;ISO]
[GO:2000533 "negative regulation of renal albumin absorption"
evidence=IEP] [GO:2000669 "negative regulation of dendritic cell
apoptotic process" evidence=ISO;ISS] InterPro:IPR000294
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00594 PRINTS:PR00001 PROSITE:PS00011 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50998 SMART:SM00069 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 RGD:61913 GO:GO:0005737
GO:GO:0045892 GO:GO:0001764 GO:GO:0046827 GO:GO:0005615
GO:GO:0071363 GO:GO:0032689 GO:GO:0071333 GO:GO:0007596
GO:GO:0031100 GO:GO:0070374 GO:GO:0005509 GO:GO:0018105
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030296
GO:GO:0050766 GO:GO:0046813 GO:GO:0035690 GO:GO:0032720
GO:GO:0032715 GO:GO:0040008 GO:GO:0009267 PROSITE:PS01186
GO:GO:0042246 GO:GO:0032148 GO:GO:0001786 GO:GO:0051897
GO:GO:0010804 GO:GO:0010628 GO:GO:0043433 InterPro:IPR001791
Pfam:PF00054 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0048146 GO:GO:0033138 GO:GO:0043491 GO:GO:0008083
GO:GO:0031589 GO:GO:2000352 GO:GO:0030971 GO:GO:0072661
GO:GO:0060090 GO:GO:0043027 GO:GO:0097028 GO:GO:2000510
InterPro:IPR026823 Pfam:PF12662 GO:GO:1900165 GO:GO:0005245
Pfam:PF02210 GO:GO:0043277 GO:GO:0019079 GO:GO:0071307 GO:GO:0048771
GO:GO:0035754 GO:GO:0019064 Gene3D:4.10.740.10 InterPro:IPR017857
SUPFAM:SSF57630 GO:GO:0032825 eggNOG:NOG149502 HOGENOM:HOG000065758
HOVERGEN:HBG051702 GO:GO:0035457 GO:GO:0007167 GO:GO:0085029
GO:GO:0097241 GO:GO:0010934 GO:GO:0070168 GO:GO:2000669
GO:GO:2000270 GO:GO:0050711 GO:GO:1900142 GO:GO:0033159
GO:GO:2000533 GO:GO:0001961 GO:GO:0003104 GO:GO:0032008
GeneTree:ENSGT00530000063339 OMA:DGCMRSW OrthoDB:EOG4Z0B57
EMBL:D42148 IPI:IPI00201622 PIR:I55476 UniGene:Rn.52228
ProteinModelPortal:Q63772 SMR:Q63772 STRING:Q63772
PhosphoSite:Q63772 PRIDE:Q63772 Ensembl:ENSRNOT00000024677
UCSC:RGD:61913 InParanoid:Q63772 Genevestigator:Q63772
GermOnline:ENSRNOG00000018233 Uniprot:Q63772
Length = 674
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 51/229 (22%), Positives = 98/229 (42%)
Query: 23 RFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD 82
R +FDF T + +G++F+ ++ L ++ G++ +G ++S
Sbjct: 315 RLLAEFDFR-----TFDPEGVLFFAGGRSDSTWIVLGLRAGRLELQLRY-NGVGRITSSG 368
Query: 83 KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL----GGVPLNT 138
I G W T+ + +K++ V + G L G ++L GG+P
Sbjct: 369 PTINHGMWQTISVEELDRNLVIKVNKDAVMKIAVAGGLFQLER-GLYHLNLTVGGIPFKE 427
Query: 139 STLVRGNLGLNDTFVGCLRN---LKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYV 195
S LV+ +N GC+R+ L + +Q+ ++ + C TE G FF +G
Sbjct: 428 SDLVQP---INPRLDGCMRSWNWLNGEDSAIQETVKANTKMQCFSVTERGSFFPGNGFAF 484
Query: 196 KGVEQFR----VGRE----MELKMDVKPRNISGLLLSVHSKKDYFILQM 236
+ R VG E +E+ ++P +G+L+++ KD +L +
Sbjct: 485 YSLNYTRTSLDVGTETTWEVEVVARIRPATDTGVLMALVGDKDVVLLSV 533
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 48/179 (26%), Positives = 82/179 (45%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
K S +E + + + + + S+ + T + +GI+ Y D D +AL + G + ++
Sbjct: 962 KDSYVELAS--AKVRPQANISLQV-ATDKDNGILLYKGDN---DPLALELYQGHVRLIYD 1015
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGESKGSSKTLNIFGPF 129
S P + + DG++H+VE + L +D G + G+ + + I P
Sbjct: 1016 SLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQ-KQPAVGINSPL 1074
Query: 130 YLGGVPLNT--STLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT---SSGVIP-CSDKT 182
YLGG+P +T S L +G F GC+ ++ NN+L K S GV P C T
Sbjct: 1075 YLGGIPTSTGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCT 1133
>UNIPROTKB|F1SKK7 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00181 SMART:SM00303
GO:GO:0016021 GO:GO:0005886 GO:GO:0001764 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007413
GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170 Pfam:PF02210
EMBL:CU861514 EMBL:CU633242 Ensembl:ENSSSCT00000012437 OMA:PLYAPRW
Uniprot:F1SKK7
Length = 3307
Score = 93 (37.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 27/105 (25%), Positives = 52/105 (49%)
Query: 25 KNKFDFSIDIK-TTSEQDGIIFYVADV--KHIDYVALYVKDGQIHYSFNCGSGPMALS-S 80
+ +F ++ + T + G++FY + KH D++AL + GQ+ +++ G +S +
Sbjct: 1526 RQRFHLTLSLSFATVQPSGLLFYNGRLNEKH-DFLALELVAGQVRLTYSTGESNTVVSPT 1584
Query: 81 GDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNI 125
+ DG+WHTV + K + D A+G SK L++
Sbjct: 1585 VPGGLSDGQWHTVHL---RYYNKPRTDALGGAQGPSKDKVAVLSV 1626
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 112 AEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRGNLGLNDTFVGCLRNLKSNNKLV 166
A G S K+L++ GP LGGVP L + FVGC+R+L + + V
Sbjct: 1648 AAGTQTSSKKSLDLTGPLLLGGVP----NLPENFPVSHKDFVGCMRDLHIDGRQV 1698
Score = 61 (26.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 209 LKMDVKPRNISGLLLSVHSKKDYFILQMID-GSVKATVDNGKGPISAIYTPSDPYFFCDG 267
L + + R G+L+ V + +L +D G + TV G G A + D DG
Sbjct: 1783 LGLAFRTRATQGVLMQVQAGPHSTLLCQLDRGLLSVTVTKGSG--RAAHLLLDEVTVSDG 1840
Query: 268 QWHTI 272
+WH +
Sbjct: 1841 RWHDL 1845
>UNIPROTKB|E9PQ73 [details] [associations]
symbol:FAT3 "Protocadherin Fat 3" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60 Pfam:PF02210
EMBL:AP000722 EMBL:AP000805 EMBL:AP002514 EMBL:AP003171
EMBL:AP003718 IPI:IPI00847978 HGNC:HGNC:23112 ChiTaRS:FAT3
PRIDE:E9PQ73 Ensembl:ENST00000525166 ArrayExpress:E9PQ73
Bgee:E9PQ73 Uniprot:E9PQ73
Length = 4439
Score = 132 (51.5 bits), Expect = 0.00016, P = 0.00016
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
+S I+Y + F ++ ++T + +GII Y + + L + DG++ + +C
Sbjct: 3693 NSYIKYRLSENSKEEDFKLALRLRTL-QSNGIIMYT---RANPCIILKIVDGKLWFQLDC 3748
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP L + + DG WH+V + L +D V + +TL+ Y
Sbjct: 3749 GSGPGILGISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRAPLYFQTLSTESSIYF 3808
Query: 132 GGVP----LNTSTLVRGNLGLNDTFVGCLRN-LKSNNKL-VQDKHTSSGVIPCSDKTESG 185
G + + + T R L+ F GCL + + +NN+L +Q+K +S + + + G
Sbjct: 3809 GALVQADNIRSLTDTRVTQVLSG-FQGCLDSVILNNNELPLQNKRSSFAEVVGLTELKLG 3867
Query: 186 VFFY 189
Y
Sbjct: 3868 CVLY 3871
>UNIPROTKB|Q8TDW7 [details] [associations]
symbol:FAT3 "Protocadherin Fat 3" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0007275 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 HSSP:P46531
SUPFAM:SSF49313 Gene3D:2.60.40.60 Pfam:PF02210 KO:K16506
HOGENOM:HOG000046499 HOVERGEN:HBG005641 EMBL:AP000722 EMBL:AP000805
EMBL:AP002514 EMBL:AP003171 EMBL:AP003718 EMBL:BC016722
EMBL:AB076400 IPI:IPI00847978 IPI:IPI00888216 IPI:IPI00973508
RefSeq:NP_001008781.2 UniGene:Hs.98523 ProteinModelPortal:Q8TDW7
SMR:Q8TDW7 STRING:Q8TDW7 PhosphoSite:Q8TDW7 DMDM:172045818
PaxDb:Q8TDW7 PRIDE:Q8TDW7 Ensembl:ENST00000298047
Ensembl:ENST00000409404 GeneID:120114 KEGG:hsa:120114
UCSC:uc001pdj.4 CTD:120114 GeneCards:GC11P092164 HGNC:HGNC:23112
HPA:HPA026878 MIM:612483 neXtProt:NX_Q8TDW7 PharmGKB:PA134962612
InParanoid:Q8TDW7 OMA:DNGWMVT OrthoDB:EOG4CNQQ3 ChiTaRS:FAT3
GenomeRNAi:120114 NextBio:80524 ArrayExpress:Q8TDW7 Bgee:Q8TDW7
CleanEx:HS_FAT3 Genevestigator:Q8TDW7 Uniprot:Q8TDW7
Length = 4589
Score = 132 (51.5 bits), Expect = 0.00017, P = 0.00017
Identities = 45/184 (24%), Positives = 83/184 (45%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
+S I+Y + F ++ ++T + +GII Y + + L + DG++ + +C
Sbjct: 3843 NSYIKYRLSENSKEEDFKLALRLRTL-QSNGIIMYT---RANPCIILKIVDGKLWFQLDC 3898
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP L + + DG WH+V + L +D V + +TL+ Y
Sbjct: 3899 GSGPGILGISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRAPLYFQTLSTESSIYF 3958
Query: 132 GGVP----LNTSTLVRGNLGLNDTFVGCLRN-LKSNNKL-VQDKHTSSGVIPCSDKTESG 185
G + + + T R L+ F GCL + + +NN+L +Q+K +S + + + G
Sbjct: 3959 GALVQADNIRSLTDTRVTQVLSG-FQGCLDSVILNNNELPLQNKRSSFAEVVGLTELKLG 4017
Query: 186 VFFY 189
Y
Sbjct: 4018 CVLY 4021
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 48/179 (26%), Positives = 82/179 (45%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
K S +E + + + + + S+ + T + +GI+ Y D D +AL + G + ++
Sbjct: 1165 KDSYVELAS--AKVRPQANISLQV-ATDKDNGILLYKGDN---DPLALELYQGHVRLVYD 1218
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGESKGSSKTLNIFGPF 129
S P + + DG++H+VE + L +D G + G+ + + I P
Sbjct: 1219 SLSSPPTTVYSVETVNDGQFHSVELVTLNQTLNLVVDKGTPKSLGKLQ-KQPAVGINSPL 1277
Query: 130 YLGGVPLNT--STLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT---SSGVIP-CSDKT 182
YLGG+P +T S L +G F GC+ ++ NN+L K S GV P C T
Sbjct: 1278 YLGGIPTSTGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCT 1336
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 48/179 (26%), Positives = 82/179 (45%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
K S +E + + + + + S+ + T + +GI+ Y D D +AL + G + ++
Sbjct: 1172 KDSYVELAS--AKVRPQANISLQV-ATDKDNGILLYKGDN---DPLALELYQGHVRLVYD 1225
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGESKGSSKTLNIFGPF 129
S P + + DG++H+VE + L +D G + G+ + + I P
Sbjct: 1226 SLSSPPTTVYSVETVNDGQFHSVELVTLNQTLNLVVDKGTPKSLGKLQ-KQPAVGINSPL 1284
Query: 130 YLGGVPLNT--STLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT---SSGVIP-CSDKT 182
YLGG+P +T S L +G F GC+ ++ NN+L K S GV P C T
Sbjct: 1285 YLGGIPTSTGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCT 1343
>UNIPROTKB|F1RXZ0 [details] [associations]
symbol:CNTNAP5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR000421 InterPro:IPR000742 PROSITE:PS01286
PROSITE:PS50022 PROSITE:PS50026 SMART:SM00181 INTERPRO:IPR002181
GO:GO:0007165 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 SUPFAM:SSF56496 PROSITE:PS51406 Pfam:PF02210
GeneTree:ENSGT00560000076804 OMA:FANRRMH EMBL:AEMK01014103
EMBL:AEMK01194059 EMBL:AEMK01194621 EMBL:CU469228 EMBL:CU571099
EMBL:CU856257 EMBL:CU862002 EMBL:CU928327
Ensembl:ENSSSCT00000017126 Uniprot:F1RXZ0
Length = 1184
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 74/307 (24%), Positives = 118/307 (38%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD------KL 84
I +K S Q DG++F+ + + D + L ++ G++ N LSS L
Sbjct: 81 ISLKFKSMQGDGVLFH-GEGQRGDQITLELQKGRLALHLNLDDSKPRLSSSPPSATLGSL 139
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPLNTSTLVRG 144
+ D WH+V R +D +KG + L+I GG+P V G
Sbjct: 140 LDDQHWHSVLLERVGKQVNFTVDKHT-QHFRTKGEADALDIDYELSFGGIP------VPG 192
Query: 145 NLG--LNDTFVGCLRNLKSNNKLVQD-----KH---TSSGV-IPCSDKTESGVFFYNSGG 193
G L F GC+ NL N + D KH T V CS+ + F NS
Sbjct: 193 KPGTFLKKNFHGCMENLYYNGVNIIDLAKRRKHQIYTVGNVTFSCSEPQIVPITFVNSSS 252
Query: 194 -YV--KGVEQFRVGREMELKMDVKPRNISGLLLS--VHSKKDYFILQMIDGSVKATVDNG 248
Y+ G Q G + + + N GLLLS + +L + G ++ +
Sbjct: 253 SYLLLPGTPQLD-G--LSVSFQFRTWNQDGLLLSTMLSEGSGTLLLSLEGGRLRLVIQKM 309
Query: 249 KGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNA 308
+ I T + DG WH + +N I++ +D+ P + + N+
Sbjct: 310 TERAAEILTGRN---LNDGLWHLLSINARRNRITLTLDNDAAS-PAQDT-SRMQIYSGNS 364
Query: 309 VFIGGHP 315
+ GG P
Sbjct: 365 YYFGGCP 371
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 43/161 (26%), Positives = 78/161 (48%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
K S +E + + + + + S+ + T + +GI+ Y D D +AL + G + ++
Sbjct: 981 KDSYVELAS--AKVRPQANISLQV-ATDKDNGILLYKGDN---DPLALELYQGHVRLVYD 1034
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGESKGSSKTLNIFGPF 129
S P + + DG++H+VE + L +D G + G+ + ++I P
Sbjct: 1035 SLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQ-KQPAVSINSPL 1093
Query: 130 YLGGVPLNT--STLVRGNLGLNDTFVGCLRNLKSNNKLVQD 168
YLGG+P +T S L +G F GC+ ++ NN+L QD
Sbjct: 1094 YLGGIPTSTGLSALRQGMDRPLGGFHGCIHEVRINNEL-QD 1133
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 43/161 (26%), Positives = 78/161 (48%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
K S +E + + + + + S+ + T + +GI+ Y D D +AL + G + ++
Sbjct: 982 KDSYVELAS--AKVRPQANISLQV-ATDKDNGILLYKGDN---DPLALELYQGHVRLVYD 1035
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGESKGSSKTLNIFGPF 129
S P + + DG++H+VE + L +D G + G+ + ++I P
Sbjct: 1036 SLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQ-KQPAVSINSPL 1094
Query: 130 YLGGVPLNT--STLVRGNLGLNDTFVGCLRNLKSNNKLVQD 168
YLGG+P +T S L +G F GC+ ++ NN+L QD
Sbjct: 1095 YLGGIPTSTGLSALRQGADRPLGGFHGCIHEVRINNEL-QD 1134
>ZFIN|ZDB-GENE-070705-209 [details] [associations]
symbol:cntnap5b "contactin associated protein-like
5b" species:7955 "Danio rerio" [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR000421 InterPro:IPR000742 Pfam:PF00754
PROSITE:PS01285 PROSITE:PS01286 PROSITE:PS50022 PROSITE:PS50026
SMART:SM00181 SMART:SM00231 INTERPRO:IPR002181
ZFIN:ZDB-GENE-070705-209 GO:GO:0007165 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 SUPFAM:SSF56496
PROSITE:PS51406 Pfam:PF02210 GeneTree:ENSGT00560000076804
EMBL:CABZ01039251 EMBL:CABZ01039252 EMBL:CABZ01039253
EMBL:CABZ01039254 EMBL:CABZ01039255 EMBL:CABZ01039256
EMBL:CABZ01039257 EMBL:CABZ01044499 EMBL:CABZ01044500
EMBL:CABZ01044501 EMBL:CABZ01044502 EMBL:CABZ01044503
EMBL:CABZ01044504 EMBL:CABZ01044505 EMBL:CABZ01044506
EMBL:CABZ01093512 EMBL:CABZ01093513 EMBL:CU062647 IPI:IPI00801051
Ensembl:ENSDART00000110136 Uniprot:F1Q802
Length = 1306
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 70/304 (23%), Positives = 116/304 (38%)
Query: 32 IDIKTTSEQ-DGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDK------L 84
I ++ S++ DG++ + + + DY+ L + G++ N SSG L
Sbjct: 209 ISLRFKSQRADGVLVH-GEGQRGDYITLELHKGRLALHINLDDAKTHPSSGHVSVFLGGL 267
Query: 85 ILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYLGGVPL--NTSTLV 142
+ D WH+V R +D ++ + G +L + GG+PL T +
Sbjct: 268 LDDQHWHSVLIERFNKQINFTVD-RLTKHVRTGGLDDSLEVDYELSFGGIPLPGKPGTFL 326
Query: 143 RGNLGLNDTFVGCLRNLKSNNKLVQD--KHT-----SSGVIP--CSDKTESGVFFYNSGG 193
R N F GC+ NL N + D K S G + CS+ F +S
Sbjct: 327 RKN------FHGCMENLYYNGVNIIDLAKRRKPQIYSVGNVSFSCSEPVLISSTFLSSSS 380
Query: 194 YVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDY--FILQMIDGSVKATVDNGKGP 251
+ + + + + N G+LLSV KD +L ++ G ++ +
Sbjct: 381 SFLALPLDSAAETLSVSLQFRTWNREGMLLSVGLGKDSEKLLLLLVHGQLRLSHHRSALQ 440
Query: 252 ISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTNNAVFI 311
S I DGQWHT+ +S+AVD D+P ++ I
Sbjct: 441 SSDIVIGQA---LSDGQWHTLSISIAGYQVSLAVD----DEPPSTMQMKEVALPGKSLLI 493
Query: 312 GGHP 315
GG P
Sbjct: 494 GGCP 497
Score = 91 (37.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 31/127 (24%), Positives = 51/127 (40%)
Query: 188 FYNSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKA-TVD 246
FY Y+ + +++ + K SG+ L KD+ L++ SV T D
Sbjct: 798 FYQESSYLH-FPTLQAELSVDISLYFKTTAPSGVFLENLGTKDFIRLELSGPSVVTFTFD 856
Query: 247 NGKGPISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSETDTN 306
G GP+ + T D QWH + + + S+ VD + G + N
Sbjct: 857 VGNGPV--VLTVKSHVPLNDKQWHYVRSERNVREASLQVDQLPLRFLEAPSEGHTHLQLN 914
Query: 307 NAVFIGG 313
+ +FIGG
Sbjct: 915 SQLFIGG 921
Score = 82 (33.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 39/151 (25%), Positives = 65/151 (43%)
Query: 31 SIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGDKLI----L 86
S+ +T + ++G++ V K + + L + GQ+ S + AL S D +I
Sbjct: 397 SLQFRTWN-REGMLLSVGLGKDSEKLLLLLVHGQLRLSHHRS----ALQSSDIVIGQALS 451
Query: 87 DGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL-GGVPLNTSTLVRGN 145
DG+WHT+ S L +D E S K + + G L GG P S +G
Sbjct: 452 DGQWHTLSISIAGYQVSLAVDD----EPPSTMQMKEVALPGKSLLIGGCPSVLSN--QGC 505
Query: 146 LGLNDTFVGCLRNLKSNNKLVQDKHTSSGVI 176
+ GC+R++ NNK + G++
Sbjct: 506 RNPTMAYQGCMRSVVINNKPINFYLVQQGLL 536
>UNIPROTKB|E1BT21 [details] [associations]
symbol:CRB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005902 "microvillus"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005886
GO:GO:0007009 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0005902 Pfam:PF02210
Pfam:PF12661 OMA:QYIRVWL GeneTree:ENSGT00690000101660
EMBL:AADN02033824 EMBL:AADN02033825 EMBL:AADN02033826
EMBL:AADN02033827 IPI:IPI00593999 ProteinModelPortal:E1BT21
Ensembl:ENSGALT00000003596 Uniprot:E1BT21
Length = 1378
Score = 115 (45.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 40/168 (23%), Positives = 79/168 (47%)
Query: 15 IEYPTITGRFKNKFDFSIDIK-TTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGS 73
++ PT T K + ++I+++ T + +FY + +V L + +G +H S +
Sbjct: 470 LKNPTTT---KEESSYNINLRFQTVQPTAFLFYRGEKD--TFVKLELLNGYLHLSVQVKN 524
Query: 74 GPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLN-----IFGP 128
P AL + DGEWH+VE + + +D +K S+ N F
Sbjct: 525 QPRALLHISHNVSDGEWHSVEVTLARAVTLNLLDSSCAESCVNKTSAMIDNDHVRLAFQS 584
Query: 129 FYLGGVPL----NTSTLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHTS 172
+LG +P+ ++S L N+ +FVGCL++++ + ++ ++ S
Sbjct: 585 TFLGSLPVGNISSSSQLNINNIHSTPSFVGCLQDIEIDLNVITPENAS 632
Score = 57 (25.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/131 (19%), Positives = 51/131 (38%)
Query: 190 NSGGYVKGVEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNGK 249
+S GY + + M V+ R SGLLL++ + ++ ++G A +
Sbjct: 693 DSSGYAAFSVDATENENLNISMFVRTRKSSGLLLALRNSTSLYVRVYLEGGKLAMLAPNS 752
Query: 250 GPISAIYTPSDPYFFCDG---QWHTIVAIKTKNVIS-VAVDSMTTDKPGL----GPPGSS 301
+ + +D F+ + + + ++ + ++ +TT G P +
Sbjct: 753 IKLLGKHPINDGNFYLITLKIEPNMLELFQSSQYLGFISTPVLTTQSKDFLYVGGLPDNR 812
Query: 302 ETDTNNAVFIG 312
ETD N F G
Sbjct: 813 ETDRNGGYFKG 823
>UNIPROTKB|F1MC84 [details] [associations]
symbol:F1MC84 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 OMA:DNGWMVT
EMBL:DAAA02062314 EMBL:DAAA02062315 EMBL:DAAA02062316
EMBL:DAAA02062317 IPI:IPI01001651 Ensembl:ENSBTAT00000005332
Uniprot:F1MC84
Length = 4587
Score = 130 (50.8 bits), Expect = 0.00028, P = 0.00028
Identities = 45/184 (24%), Positives = 82/184 (44%)
Query: 12 SSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNC 71
+S I+Y + F ++ ++T + +GII Y + + L + DG++ + +C
Sbjct: 3827 NSYIKYRLSENSKEEDFKLALRLRTL-QSNGIIMYT---RANPCIILKIVDGRLWFQLDC 3882
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
GSGP L + + DG WH+V + L +D V + +TL Y
Sbjct: 3883 GSGPGILGISGRAVNDGSWHSVFLELNRNFTSLALDDSYVERRRAPLYFQTLGTDSAIYF 3942
Query: 132 GGV----PLNTSTLVRGNLGLNDTFVGCLRNLK-SNNKL-VQDKHTSSGVIPCSDKTESG 185
G + + + T R L+ F GCL ++ +NN+L +Q+K +S + + + G
Sbjct: 3943 GALVQADSIRSLTDARVTQVLSG-FQGCLDSVVLNNNELPLQNKRSSFAEVVGLTELKLG 4001
Query: 186 VFFY 189
Y
Sbjct: 4002 CVLY 4005
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 48/179 (26%), Positives = 82/179 (45%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
K S +E + + + + + S+ + T + +GI+ Y D D +AL + G + ++
Sbjct: 1165 KDSYVELAS--AKVRPQANISLQV-ATDKDNGILLYKGDN---DPLALELYQGHVRLVYD 1218
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGESKGSSKTLNIFGPF 129
S P + + DG++H+VE + L +D G + G+ + + I P
Sbjct: 1219 SLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQ-KQPAVGINSPL 1277
Query: 130 YLGGVPLNT--STLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT---SSGVIP-CSDKT 182
YLGG+P +T S L +G F GC+ ++ NN+L K S GV P C T
Sbjct: 1278 YLGGIPTSTGLSALRQGADRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCT 1336
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 48/179 (26%), Positives = 82/179 (45%)
Query: 11 KSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFN 70
K S +E + + + + + S+ + T + +GI+ Y D D +AL + G + ++
Sbjct: 1165 KDSYVELAS--AKVRPQANISLQV-ATDKDNGILLYKGDN---DPLALELYQGHVRLVYD 1218
Query: 71 CGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID-GQVVAEGESKGSSKTLNIFGPF 129
S P + + DG++H+VE + L +D G + G+ + + I P
Sbjct: 1219 SLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQ-KQPAVGINSPL 1277
Query: 130 YLGGVPLNT--STLVRGNLGLNDTFVGCLRNLKSNNKLVQDKHT---SSGVIP-CSDKT 182
YLGG+P +T S L +G F GC+ ++ NN+L K S GV P C T
Sbjct: 1278 YLGGIPTSTGLSALRQGADRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCT 1336
>UNIPROTKB|G3TKE9 [details] [associations]
symbol:GAS6 "Uncharacterized protein" species:9785
"Loxodonta africana" [GO:0001786 "phosphatidylserine binding"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=ISS] [GO:0003104
"positive regulation of glomerular filtration" evidence=ISS]
[GO:0005102 "receptor binding" evidence=ISS] [GO:0005245
"voltage-gated calcium channel activity" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0006909 "phagocytosis" evidence=ISS] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0010628 "positive regulation of
gene expression" evidence=ISS] [GO:0010804 "negative regulation of
tumor necrosis factor-mediated signaling pathway" evidence=ISS]
[GO:0018105 "peptidyl-serine phosphorylation" evidence=ISS]
[GO:0019064 "viral entry into host cell via membrane fusion with
the plasma membrane" evidence=ISS] [GO:0019079 "viral genome
replication" evidence=ISS] [GO:0030296 "protein tyrosine kinase
activator activity" evidence=ISS] [GO:0032008 "positive regulation
of TOR signaling cascade" evidence=ISS] [GO:0032148 "activation of
protein kinase B activity" evidence=ISS] [GO:0032689 "negative
regulation of interferon-gamma production" evidence=ISS]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=ISS] [GO:0032825 "positive regulation of
natural killer cell differentiation" evidence=ISS] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=ISS] [GO:0033159 "negative regulation of protein import
into nucleus, translocation" evidence=ISS] [GO:0035457 "cellular
response to interferon-alpha" evidence=ISS] [GO:0035690 "cellular
response to drug" evidence=ISS] [GO:0035754 "B cell chemotaxis"
evidence=ISS] [GO:0043027 "cysteine-type endopeptidase inhibitor
activity involved in apoptotic process" evidence=ISS] [GO:0043154
"negative regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0043277 "apoptotic
cell clearance" evidence=ISS] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0046718 "viral
entry into host cell" evidence=ISS] [GO:0046813 "virion attachment,
binding of host cell surface receptor" evidence=ISS] [GO:0046827
"positive regulation of protein export from nucleus" evidence=ISS]
[GO:0048146 "positive regulation of fibroblast proliferation"
evidence=ISS] [GO:0050711 "negative regulation of interleukin-1
secretion" evidence=ISS] [GO:0050766 "positive regulation of
phagocytosis" evidence=ISS] [GO:0051897 "positive regulation of
protein kinase B signaling cascade" evidence=ISS] [GO:0060090
"binding, bridging" evidence=ISS] [GO:0061098 "positive regulation
of protein tyrosine kinase activity" evidence=ISS] [GO:0070168
"negative regulation of biomineral tissue development"
evidence=ISS] [GO:0071307 "cellular response to vitamin K"
evidence=ISS] [GO:0071333 "cellular response to glucose stimulus"
evidence=ISS] [GO:0072661 "protein targeting to plasma membrane"
evidence=ISS] [GO:0085029 "extracellular matrix assembly"
evidence=ISS] [GO:0097241 "hematopoietic stem cell migration to
bone marrow" evidence=ISS] [GO:1900142 "negative regulation of
oligodendrocyte apoptotic process" evidence=ISS] [GO:1900165
"negative regulation of interleukin-6 secretion" evidence=ISS]
[GO:2000270 "negative regulation of fibroblast apoptotic process"
evidence=ISS] [GO:2000352 "negative regulation of endothelial cell
apoptotic process" evidence=ISS] [GO:2000533 "negative regulation
of renal albumin absorption" evidence=ISS] [GO:2000669 "negative
regulation of dendritic cell apoptotic process" evidence=ISS]
InterPro:IPR000294 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00594 PRINTS:PR00001 PROSITE:PS00011
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50998 SMART:SM00069
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0045892 GO:GO:0001764 GO:GO:0046827 GO:GO:0005615
GO:GO:0071363 GO:GO:0032689 GO:GO:0071333 GO:GO:0007596
GO:GO:0070374 GO:GO:0005102 GO:GO:0005509 GO:GO:0018105
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030296
GO:GO:0050766 GO:GO:0046813 GO:GO:0035690 GO:GO:0032720
GO:GO:0032715 GO:GO:0009267 PROSITE:PS01186 GO:GO:0032148
GO:GO:0001786 GO:GO:0051897 GO:GO:0010804 GO:GO:0010628
GO:GO:0043433 InterPro:IPR001791 Pfam:PF00054 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0048146 GO:GO:0033138
GO:GO:0043491 GO:GO:0031589 GO:GO:2000352 GO:GO:0072661
GO:GO:0060090 GO:GO:0043027 GO:GO:0097028 GO:GO:2000510
InterPro:IPR026823 Pfam:PF12662 GO:GO:1900165 GO:GO:0005245
Pfam:PF02210 GO:GO:0043277 GO:GO:0019079 GO:GO:0071307
GO:GO:0035754 GO:GO:0019064 Gene3D:4.10.740.10 InterPro:IPR017857
SUPFAM:SSF57630 GO:GO:0032825 GO:GO:0035457 GO:GO:0007167
GO:GO:0085029 GO:GO:0097241 GO:GO:0010934 GO:GO:0070168
GO:GO:2000669 GO:GO:2000270 GO:GO:0050711 GO:GO:1900142
GO:GO:0033159 GO:GO:2000533 GO:GO:0001961 GO:GO:0003104
GO:GO:0032008 GeneTree:ENSGT00530000063339 OMA:DGCMRSW
ProteinModelPortal:G3TKE9 Ensembl:ENSLAFT00000018258 Uniprot:G3TKE9
Length = 672
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 54/222 (24%), Positives = 100/222 (45%)
Query: 23 RFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDG----QIHYSFNCGSGPMAL 78
R +FDF T + +G++F+ + ++ L ++ G Q+HY+ G G +
Sbjct: 313 RLMAEFDFR-----TFDPEGVLFFAGGHQDSTWIVLALRAGRLELQLHYN---GIGRVT- 363
Query: 79 SSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL----GGV 134
SSG +I G W T+ + + +KI+ V + G L+ G ++L GG+
Sbjct: 364 SSGP-VINHGMWQTISVEELERNLVIKINKDAVMKIAVAGDLFQLHR-GLYHLNLTVGGI 421
Query: 135 PLNTSTLVRGNLGLNDTFVGCLRN---LKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNS 191
P LV+ +N GC+R+ + + ++QD + + C TE G F+ +
Sbjct: 422 PFKDEALVQP---INPRLDGCVRSWNWMNGEDTIIQDTVKVNTKMQCFSVTEKGSFYPGN 478
Query: 192 GGYVKGVEQFR----VGREMELKMDV----KPRNISGLLLSV 225
G + R VG E +++V +P +G+LL++
Sbjct: 479 GFAFFSLNYMRTSLDVGMETTWEIEVIARIRPATDTGVLLAL 520
>UNIPROTKB|G5E9F8 [details] [associations]
symbol:PROS1 "Vitamin K-dependent protein S" species:9606
"Homo sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
InterPro:IPR000152 EMBL:CH471052 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 EMBL:AC117474 Pfam:PF02210 UniGene:Hs.64016
HGNC:HGNC:9456 ChiTaRS:PROS1 EMBL:AC144562
ProteinModelPortal:G5E9F8 SMR:G5E9F8 PRIDE:G5E9F8
Ensembl:ENST00000407433 ArrayExpress:G5E9F8 Bgee:G5E9F8
Uniprot:G5E9F8
Length = 545
Score = 119 (46.9 bits), Expect = 0.00039, P = 0.00039
Identities = 55/257 (21%), Positives = 109/257 (42%)
Query: 7 AGTSKSSRIEYPTITGRFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIH 66
AG + P I+ RF +FDF T + +G+I Y + H ++ + ++ G+I
Sbjct: 176 AGVVLYLKFRLPEIS-RFSAEFDFR-----TYDSEGVILYAESIDHSAWLLIALRGGKIE 229
Query: 67 YSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSS-KTLN- 124
+++G +I +G W+ V + S +KI + V + G K N
Sbjct: 230 VQLK-NEHTSKITTGGDVINNGLWNMVSVEELEHSISIKIAKEAVMDINKPGPLFKPENG 288
Query: 125 -IFGPFYLGGVPLNT-STLVRGNLGLNDTFVGCLR--NLKSNN-----KLVQDKHTSSGV 175
+ Y G P S L++ +N GC+R NL +++Q+K
Sbjct: 289 LLETKVYFAGFPRKVESELIKP---INPRLDGCIRSWNLMKQGASGIKEIIQEKQNKH-- 343
Query: 176 IPCSDKTESGVFFYNSGGYVKGVEQFRV----GREMELKMDVKPRNISGLLLSVHSKKDY 231
C E G ++ SG ++ V G + + ++++P +G++L++ S +
Sbjct: 344 --CLVTVEKGSYYPGSGIAQFHIDYNNVSSAEGWHVNVTLNIRPSTGTGVMLALVSGNNT 401
Query: 232 --FILQMIDGSVKATVD 246
F + ++D + + + D
Sbjct: 402 VPFAVSLVDSTSEKSQD 418
>UNIPROTKB|H0V9V5 [details] [associations]
symbol:GAS6 "Uncharacterized protein" species:10141 "Cavia
porcellus" [GO:0001786 "phosphatidylserine binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=ISS] [GO:0003104 "positive regulation
of glomerular filtration" evidence=ISS] [GO:0005102 "receptor
binding" evidence=ISS] [GO:0005245 "voltage-gated calcium channel
activity" evidence=ISS] [GO:0005615 "extracellular space"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006468
"protein phosphorylation" evidence=ISS] [GO:0006909 "phagocytosis"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0010804 "negative regulation of tumor necrosis factor-mediated
signaling pathway" evidence=ISS] [GO:0018105 "peptidyl-serine
phosphorylation" evidence=ISS] [GO:0019064 "viral entry into host
cell via membrane fusion with the plasma membrane" evidence=ISS]
[GO:0019079 "viral genome replication" evidence=ISS] [GO:0030296
"protein tyrosine kinase activator activity" evidence=ISS]
[GO:0032008 "positive regulation of TOR signaling cascade"
evidence=ISS] [GO:0032148 "activation of protein kinase B activity"
evidence=ISS] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=ISS] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=ISS] [GO:0032825 "positive
regulation of natural killer cell differentiation" evidence=ISS]
[GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=ISS] [GO:0033159 "negative regulation of
protein import into nucleus, translocation" evidence=ISS]
[GO:0035457 "cellular response to interferon-alpha" evidence=ISS]
[GO:0035690 "cellular response to drug" evidence=ISS] [GO:0035754
"B cell chemotaxis" evidence=ISS] [GO:0043027 "cysteine-type
endopeptidase inhibitor activity involved in apoptotic process"
evidence=ISS] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0043277 "apoptotic cell clearance" evidence=ISS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0045860 "positive regulation
of protein kinase activity" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046718 "viral entry into host cell" evidence=ISS] [GO:0046813
"virion attachment, binding of host cell surface receptor"
evidence=ISS] [GO:0046827 "positive regulation of protein export
from nucleus" evidence=ISS] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=ISS] [GO:0050711 "negative
regulation of interleukin-1 secretion" evidence=ISS] [GO:0050766
"positive regulation of phagocytosis" evidence=ISS] [GO:0051897
"positive regulation of protein kinase B signaling cascade"
evidence=ISS] [GO:0060090 "binding, bridging" evidence=ISS]
[GO:0061098 "positive regulation of protein tyrosine kinase
activity" evidence=ISS] [GO:0070168 "negative regulation of
biomineral tissue development" evidence=ISS] [GO:0071307 "cellular
response to vitamin K" evidence=ISS] [GO:0071333 "cellular response
to glucose stimulus" evidence=ISS] [GO:0072661 "protein targeting
to plasma membrane" evidence=ISS] [GO:0085029 "extracellular matrix
assembly" evidence=ISS] [GO:0097241 "hematopoietic stem cell
migration to bone marrow" evidence=ISS] [GO:1900142 "negative
regulation of oligodendrocyte apoptotic process" evidence=ISS]
[GO:1900165 "negative regulation of interleukin-6 secretion"
evidence=ISS] [GO:2000270 "negative regulation of fibroblast
apoptotic process" evidence=ISS] [GO:2000352 "negative regulation
of endothelial cell apoptotic process" evidence=ISS] [GO:2000533
"negative regulation of renal albumin absorption" evidence=ISS]
[GO:2000669 "negative regulation of dendritic cell apoptotic
process" evidence=ISS] InterPro:IPR000294 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00594 Pfam:PF07645
PRINTS:PR00001 PROSITE:PS00011 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50998 SMART:SM00069 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0045892 GO:GO:0046827
GO:GO:0005615 GO:GO:0032689 GO:GO:0071333 GO:GO:0005102
GO:GO:0005509 GO:GO:0018105 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030296 GO:GO:0050766 GO:GO:0046813
GO:GO:0035690 GO:GO:0032720 PROSITE:PS01186 GO:GO:0032148
GO:GO:0001786 GO:GO:0051897 GO:GO:0010804 GO:GO:0010628
GO:GO:0043433 InterPro:IPR001791 Pfam:PF00054 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0048146 GO:GO:0033138
GO:GO:0043491 GO:GO:2000352 GO:GO:0072661 GO:GO:0060090
GO:GO:0043027 InterPro:IPR026823 Pfam:PF12662 GO:GO:1900165
GO:GO:0005245 Pfam:PF02210 GO:GO:0043277 GO:GO:0019079
GO:GO:0071307 GO:GO:0035754 GO:GO:0019064 Gene3D:4.10.740.10
InterPro:IPR017857 SUPFAM:SSF57630 GO:GO:0032825 GO:GO:0035457
GO:GO:0085029 GO:GO:0097241 GO:GO:0070168 GO:GO:2000669
GO:GO:2000270 GO:GO:0050711 GO:GO:1900142 GO:GO:0033159
GO:GO:2000533 GO:GO:0001961 GO:GO:0003104 GO:GO:0032008
GeneTree:ENSGT00530000063339 OMA:DGCMRSW EMBL:AAKN02008480
ProteinModelPortal:H0V9V5 Ensembl:ENSCPOT00000007407 Uniprot:H0V9V5
Length = 676
Score = 120 (47.3 bits), Expect = 0.00040, P = 0.00040
Identities = 68/294 (23%), Positives = 116/294 (39%)
Query: 18 PTITGRFKN----KFDFSIDIKTTSEQDGIIFYVADVKHID--YVALYVKDGQIHYSFNC 71
P I RFK + D +T + +GI+F+ H+D +V L ++ G++
Sbjct: 304 PVIRLRFKRLQPTRLVAEFDFRTF-DPEGILFFAGG--HLDSTWVVLGLRAGRLELQLRY 360
Query: 72 GSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL 131
SSG +I G W T+ + +K++ V + G L+ G ++L
Sbjct: 361 NGVGRVTSSGP-VINHGLWQTISVEELDRNLVIKVNKDAVMKIAVAGDLFQLDR-GLYHL 418
Query: 132 ----GGVPLNTSTLVRGNLGLNDTFVGCLRN---LKSNNKLVQDKHTSSGVIPCSDKTES 184
GGVP LV+ +N GC+R+ L + +Q+ ++ + C TE
Sbjct: 419 NLTVGGVPFPAQDLVQP---INPRLDGCMRSWSWLNGEDNTIQETVKANTKMQCFSVTEK 475
Query: 185 GVFFYNSGGYVKGVEQFRV----GRE----MELKMDVKPRNISGLLLSVHSKKDYFILQM 236
G FF SG + R G E +E+ ++P +G+LL++ D L +
Sbjct: 476 GSFFPGSGFAFHSLSYTRTSLNTGTEGTWGVEVVARIRPAADTGVLLALVGGNDTVALSV 535
Query: 237 IDGSVKATVDNGKG----PISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
+T K + I CDG+ H + + S+ VD
Sbjct: 536 ALVDYHSTKKLKKQLVVLAVENIALALMEIKVCDGREHVVTVSLKEGEASLEVD 589
>UNIPROTKB|F1MZ40 [details] [associations]
symbol:GAS6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030296 "protein tyrosine kinase activator activity"
evidence=ISS] [GO:0005245 "voltage-gated calcium channel activity"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] [GO:0060090 "binding, bridging"
evidence=ISS] [GO:0043027 "cysteine-type endopeptidase inhibitor
activity involved in apoptotic process" evidence=ISS] [GO:0001786
"phosphatidylserine binding" evidence=ISS] [GO:2000669 "negative
regulation of dendritic cell apoptotic process" evidence=ISS]
[GO:0097241 "hematopoietic stem cell migration to bone marrow"
evidence=ISS] [GO:0070168 "negative regulation of biomineral tissue
development" evidence=ISS] [GO:0061098 "positive regulation of
protein tyrosine kinase activity" evidence=ISS] [GO:0050766
"positive regulation of phagocytosis" evidence=ISS] [GO:0050711
"negative regulation of interleukin-1 secretion" evidence=ISS]
[GO:0046827 "positive regulation of protein export from nucleus"
evidence=ISS] [GO:0046813 "virion attachment, binding of host cell
surface receptor" evidence=ISS] [GO:0046718 "viral entry into host
cell" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043277 "apoptotic cell clearance"
evidence=ISS] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0035754 "B cell chemotaxis" evidence=ISS] [GO:0035457 "cellular
response to interferon-alpha" evidence=ISS] [GO:0033159 "negative
regulation of protein import into nucleus, translocation"
evidence=ISS] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=ISS] [GO:0032825 "positive regulation of
natural killer cell differentiation" evidence=ISS] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=ISS] [GO:1900165 "negative regulation of interleukin-6
secretion" evidence=ISS] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=ISS] [GO:0019079 "viral
genome replication" evidence=ISS] [GO:0019064 "viral entry into
host cell via membrane fusion with the plasma membrane"
evidence=ISS] [GO:0018105 "peptidyl-serine phosphorylation"
evidence=ISS] [GO:0010804 "negative regulation of tumor necrosis
factor-mediated signaling pathway" evidence=ISS] [GO:0010628
"positive regulation of gene expression" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0006909 "phagocytosis"
evidence=ISS] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=ISS] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0048146 "positive
regulation of fibroblast proliferation" evidence=ISS] [GO:0045860
"positive regulation of protein kinase activity" evidence=ISS]
[GO:0005102 "receptor binding" evidence=ISS] [GO:2000352 "negative
regulation of endothelial cell apoptotic process" evidence=ISS]
[GO:2000270 "negative regulation of fibroblast apoptotic process"
evidence=ISS] [GO:0072661 "protein targeting to plasma membrane"
evidence=ISS] [GO:0071307 "cellular response to vitamin K"
evidence=ISS] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=ISS] [GO:1900142 "negative regulation
of oligodendrocyte apoptotic process" evidence=ISS] [GO:0035690
"cellular response to drug" evidence=ISS] [GO:0006468 "protein
phosphorylation" evidence=ISS] [GO:2000533 "negative regulation of
renal albumin absorption" evidence=ISS] [GO:0085029 "extracellular
matrix assembly" evidence=ISS] [GO:0071333 "cellular response to
glucose stimulus" evidence=ISS] [GO:0032148 "activation of protein
kinase B activity" evidence=ISS] [GO:0032008 "positive regulation
of TOR signaling cascade" evidence=ISS] [GO:0003104 "positive
regulation of glomerular filtration" evidence=ISS] [GO:2000510
"positive regulation of dendritic cell chemotaxis" evidence=IEA]
[GO:0097028 "dendritic cell differentiation" evidence=IEA]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0048018 "receptor agonist activity"
evidence=IEA] [GO:0032715 "negative regulation of interleukin-6
production" evidence=IEA] [GO:0031589 "cell-substrate adhesion"
evidence=IEA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IEA] [GO:0010934 "macrophage cytokine production"
evidence=IEA] [GO:0009267 "cellular response to starvation"
evidence=IEA] [GO:0007596 "blood coagulation" evidence=IEA]
[GO:0007167 "enzyme linked receptor protein signaling pathway"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000294
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00594 PRINTS:PR00001 PROSITE:PS00011 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50998 SMART:SM00069 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005737 GO:GO:0045892
GO:GO:0001764 GO:GO:0046827 GO:GO:0005615 GO:GO:0071363
GO:GO:0032689 GO:GO:0071333 GO:GO:0007596 GO:GO:0070374
GO:GO:0005102 GO:GO:0005509 GO:GO:0018105 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030296 GO:GO:0050766
GO:GO:0046813 GO:GO:0035690 GO:GO:0032720 GO:GO:0032715
GO:GO:0009267 PROSITE:PS01186 GO:GO:0032148 GO:GO:0001786
GO:GO:0051897 GO:GO:0010804 GO:GO:0010628 GO:GO:0043433
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0048146 GO:GO:0033138 GO:GO:0043491
GO:GO:0031589 GO:GO:2000352 GO:GO:0072661 GO:GO:0060090
GO:GO:0043027 GO:GO:0097028 GO:GO:2000510 InterPro:IPR026823
Pfam:PF12662 GO:GO:1900165 GO:GO:0005245 Pfam:PF02210 GO:GO:0043277
GO:GO:0019079 GO:GO:0071307 GO:GO:0035754 GO:GO:0019064
Gene3D:4.10.740.10 InterPro:IPR017857 SUPFAM:SSF57630 GO:GO:0032825
GO:GO:0035457 GO:GO:0007167 GO:GO:0085029 GO:GO:0097241
GO:GO:0010934 GO:GO:0070168 GO:GO:2000669 GO:GO:2000270
GO:GO:0050711 GO:GO:1900142 GO:GO:0033159 GO:GO:2000533
GO:GO:0001961 GO:GO:0003104 GO:GO:0032008
GeneTree:ENSGT00530000063339 OMA:DGCMRSW EMBL:DAAA02034954
EMBL:DAAA02034955 EMBL:DAAA02034956 IPI:IPI00706240
Ensembl:ENSBTAT00000035307 Uniprot:F1MZ40
Length = 682
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 78/349 (22%), Positives = 136/349 (38%)
Query: 23 RFKNKFDFSIDIKTTSEQDGIIFYVADVKHIDYVALYVKDGQIHYSFNCGSGPMALSSGD 82
R +FDF T + +GI+F+ + ++ L ++ G++ SSG
Sbjct: 324 RLVAEFDFR-----TFDPEGILFFAGGHRDSTWIVLGLRAGRLELQLRYQGVGRVTSSGP 378
Query: 83 KLILDGEWHTVEFSRQQLSGKLKIDGQVVAEGESKGSSKTLNIFGPFYL----GGVPLNT 138
+I G W T+ + + +K++ V + G L+ G ++L GG+P
Sbjct: 379 -VINHGSWQTISVEELERNLVIKVNKDAVMKIAVAGDLFQLDR-GLYHLNLTVGGIPFQE 436
Query: 139 STLVRGNLGLNDTFVGCLRN---LKSNNKLVQDKHTSSGVIPCSDKTESGVFFYNSGGYV 195
LV +N GCL++ L + VQ+ ++ + C TE G FF SG
Sbjct: 437 KDLVHP---MNPRLDGCLKSWHWLDGEDTAVQETVKANVKMQCFSVTERGSFFPGSGFAF 493
Query: 196 KGVEQFRV----GRE----MELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDN 247
++ R G + +E V+P +G+LL++ L + +T
Sbjct: 494 FHLDYARTSPAGGTKTTWAVEAVARVRPAADTGVLLALVGDHQAVALSVALVDYHSTKKL 553
Query: 248 GKG----PISAIYTPSDPYFFCDGQWHTIVAIKTKNVISVAVDSMTTDKPGLGPPGSSET 303
K + + CDGQ H + K+ ++ VD T + + P G E
Sbjct: 554 KKQLVVLAVEGVTLVLMEIKVCDGQEHVVTISVNKDRATLEVDG-TQGQSEVSPAGLREQ 612
Query: 304 --------DTNNAVFIGGHPFLSLSSKKSGPRTK-RRSVFLINANCKAV 343
+ + FIGG P + ++S P T R + N KA+
Sbjct: 613 LAILGRHLEGSVLTFIGGLPDVPVTS---APVTAFYRGCMTLEVNRKAL 658
>RGD|1564291 [details] [associations]
symbol:Fat4 "FAT tumor suppressor homolog 4 (Drosophila)"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 RGD:1564291 GO:GO:0016021
GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104207 Pfam:PF02210
CTD:79633 KO:K16669 OMA:GKMCESS OrthoDB:EOG4HDSSK IPI:IPI00561034
RefSeq:XP_001070073.3 UniGene:Rn.30629 ProteinModelPortal:D3ZEH1
PhosphoSite:D3ZEH1 PRIDE:D3ZEH1 Ensembl:ENSRNOT00000038703
GeneID:310341 KEGG:rno:310341 UCSC:RGD:1564291 Uniprot:D3ZEH1
Length = 4981
Score = 100 (40.3 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 41/171 (23%), Positives = 79/171 (46%)
Query: 8 GTSKSSRIEYPTITGRFKNKFDFSIDIK-TTSEQDGIIFYVADVK---HIDYVALYVKDG 63
G + S +E+P++ N + I +K T + ++ Y D + +++AL + +
Sbjct: 3981 GFEELSYMEFPSLDPN--NNY---IYVKFATIKSHALLLYNYDNQTGERAEFLALEIAEE 4035
Query: 64 QIHYSFNCGSGPMALSSGDKLILDGEWHTVEFSRQQLSGKLKID--------GQVVAEGE 115
++ +S+N GSG L++ K + DG++HTV R ++ L +D G
Sbjct: 4036 RLRFSYNLGSGTYKLTTMKK-VSDGQFHTVIARRAGMAASLTVDSCSENQEPGYCTVSNV 4094
Query: 116 SKGSSKTLNIF-GPFYLGGVPLNTSTLVR-GNLGLNDTFVGCLRNLKSNNK 164
+ TL++ +GG+ L R G++ +D FVGC+ N +
Sbjct: 4095 AVSDDWTLDVQPNRVTVGGIRSLEPILQRKGHVESHD-FVGCIMEFAVNGR 4144
Score = 82 (33.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 24/90 (26%), Positives = 42/90 (46%)
Query: 198 VEQFRVGREMELKMDVKPRNISGLLLSVHSKKDYFILQMIDGSVKATVDNG-KGPISAIY 256
+E F V +E+K + N G+L+ + +Y +++ +G V T D G G + I
Sbjct: 4240 LEPFGVN-SLEVKFRTRSEN--GILIHIQESSNYTTVKIKNGKVHFTSDAGVAGKVERII 4296
Query: 257 TPSDPYFFCDGQWHTIVAIKTKNVISVAVD 286
+ + DG WHT K + ++VD
Sbjct: 4297 PEA---YVADGHWHTFRISKNGSSTVLSVD 4323
WARNING: HSPs involving 17 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 348 348 0.00099 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 267
No. of states in DFA: 600 (64 KB)
Total size of DFA: 217 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.38u 0.09s 28.47t Elapsed: 00:00:03
Total cpu time: 28.50u 0.09s 28.59t Elapsed: 00:00:03
Start: Thu Aug 15 14:07:53 2013 End: Thu Aug 15 14:07:56 2013
WARNINGS ISSUED: 2