Query psy12399
Match_columns 69
No_of_seqs 142 out of 1146
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 18:14:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12399.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12399hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0300 DltE Short-chain dehyd 99.0 2.4E-09 5.3E-14 61.9 6.6 60 1-60 22-81 (265)
2 COG4221 Short-chain alcohol de 98.9 7.5E-09 1.6E-13 59.1 6.7 59 1-62 22-80 (246)
3 KOG1201|consensus 98.9 8.9E-09 1.9E-13 60.2 7.1 60 1-62 54-113 (300)
4 PRK08862 short chain dehydroge 98.9 1.1E-08 2.4E-13 57.7 7.3 61 1-62 21-81 (227)
5 PRK05867 short chain dehydroge 98.9 2.1E-08 4.5E-13 56.9 7.3 60 1-61 25-84 (253)
6 PF13561 adh_short_C2: Enoyl-( 98.9 1.4E-08 3.1E-13 57.3 6.5 59 1-61 12-70 (241)
7 PRK07478 short chain dehydroge 98.9 2.3E-08 5E-13 56.6 7.2 60 1-61 22-81 (254)
8 PRK06139 short chain dehydroge 98.8 3.1E-08 6.8E-13 58.7 7.2 60 1-61 23-82 (330)
9 PRK08303 short chain dehydroge 98.8 4E-08 8.6E-13 57.6 7.5 60 1-61 24-93 (305)
10 PRK07063 short chain dehydroge 98.8 3.9E-08 8.4E-13 55.9 7.3 60 1-61 23-84 (260)
11 PRK08340 glucose-1-dehydrogena 98.8 3.5E-08 7.5E-13 56.2 6.9 59 1-61 16-74 (259)
12 KOG0725|consensus 98.8 4.7E-08 1E-12 56.7 7.3 61 1-61 24-86 (270)
13 PRK05876 short chain dehydroge 98.8 4.5E-08 9.7E-13 56.5 7.2 60 1-61 22-81 (275)
14 PRK08589 short chain dehydroge 98.8 5.1E-08 1.1E-12 56.0 7.3 59 1-61 22-80 (272)
15 PRK07109 short chain dehydroge 98.8 4.5E-08 9.7E-13 58.0 7.2 60 1-61 24-83 (334)
16 PRK07677 short chain dehydroge 98.8 6.5E-08 1.4E-12 54.8 7.3 60 1-61 17-76 (252)
17 PRK07791 short chain dehydroge 98.8 6.9E-08 1.5E-12 55.9 7.4 60 1-61 22-90 (286)
18 PRK07984 enoyl-(acyl carrier p 98.8 6E-08 1.3E-12 55.7 6.9 59 1-61 24-82 (262)
19 PRK07523 gluconate 5-dehydroge 98.8 7.3E-08 1.6E-12 54.6 7.1 60 1-61 26-85 (255)
20 PRK07890 short chain dehydroge 98.8 8.5E-08 1.8E-12 54.3 7.3 60 1-61 21-80 (258)
21 KOG1205|consensus 98.8 5.9E-08 1.3E-12 56.6 6.7 62 1-62 28-90 (282)
22 PRK08643 acetoin reductase; Va 98.8 9.1E-08 2E-12 54.2 7.3 60 1-61 18-77 (256)
23 PRK07097 gluconate 5-dehydroge 98.8 8.7E-08 1.9E-12 54.7 7.3 60 1-61 26-85 (265)
24 PRK08339 short chain dehydroge 98.7 8.5E-08 1.8E-12 54.9 7.1 58 1-58 24-81 (263)
25 PRK06720 hypothetical protein; 98.7 1.2E-07 2.6E-12 51.7 7.3 60 1-61 32-91 (169)
26 PRK05599 hypothetical protein; 98.7 8.6E-08 1.9E-12 54.4 7.0 59 1-61 16-75 (246)
27 PRK06172 short chain dehydroge 98.7 1.1E-07 2.4E-12 53.8 7.4 60 1-61 23-82 (253)
28 PRK07062 short chain dehydroge 98.7 1.1E-07 2.4E-12 54.2 7.3 61 1-61 24-85 (265)
29 PRK08277 D-mannonate oxidoredu 98.7 1.1E-07 2.5E-12 54.5 7.2 60 1-61 26-85 (278)
30 PRK08085 gluconate 5-dehydroge 98.7 1.3E-07 2.8E-12 53.6 7.1 60 1-61 25-84 (254)
31 PRK08690 enoyl-(acyl carrier p 98.7 1.2E-07 2.6E-12 54.2 7.1 59 1-61 24-82 (261)
32 PRK05866 short chain dehydroge 98.7 1.4E-07 3E-12 55.0 7.2 60 1-61 56-115 (293)
33 PRK05854 short chain dehydroge 98.7 1.4E-07 3.1E-12 55.3 7.3 61 1-61 30-91 (313)
34 PRK08415 enoyl-(acyl carrier p 98.7 1.4E-07 3E-12 54.5 7.1 59 1-61 23-81 (274)
35 PRK06124 gluconate 5-dehydroge 98.7 1.6E-07 3.5E-12 53.2 7.2 60 1-61 27-86 (256)
36 PRK07035 short chain dehydroge 98.7 1.7E-07 3.6E-12 53.0 7.2 60 1-61 24-83 (252)
37 PRK07454 short chain dehydroge 98.7 1.7E-07 3.6E-12 52.8 7.2 60 1-61 22-81 (241)
38 PRK06079 enoyl-(acyl carrier p 98.7 1.4E-07 3E-12 53.7 6.9 57 1-61 25-81 (252)
39 PRK07814 short chain dehydroge 98.7 1.8E-07 3.9E-12 53.4 7.3 60 1-61 26-85 (263)
40 PRK08594 enoyl-(acyl carrier p 98.7 1.8E-07 3.9E-12 53.5 7.2 58 1-61 25-85 (257)
41 PRK06603 enoyl-(acyl carrier p 98.7 1.8E-07 4E-12 53.5 7.2 59 1-61 26-84 (260)
42 PRK06505 enoyl-(acyl carrier p 98.7 1.8E-07 3.8E-12 53.9 7.1 59 1-61 25-83 (271)
43 PRK08265 short chain dehydroge 98.7 1.8E-07 4E-12 53.4 7.0 57 1-61 22-78 (261)
44 PRK06935 2-deoxy-D-gluconate 3 98.7 2.7E-07 5.9E-12 52.4 7.6 59 1-61 31-89 (258)
45 PRK06194 hypothetical protein; 98.7 2.5E-07 5.4E-12 53.2 7.4 60 1-61 22-81 (287)
46 PRK07576 short chain dehydroge 98.7 2.6E-07 5.6E-12 52.9 7.3 60 1-61 25-84 (264)
47 PRK05855 short chain dehydroge 98.7 2E-07 4.3E-12 57.7 7.2 60 1-61 331-390 (582)
48 PF00106 adh_short: short chai 98.6 2.7E-07 5.8E-12 49.2 6.8 60 1-61 16-78 (167)
49 PRK07533 enoyl-(acyl carrier p 98.6 2.6E-07 5.6E-12 52.8 7.1 59 1-61 28-86 (258)
50 PRK12429 3-hydroxybutyrate deh 98.6 3E-07 6.5E-12 51.9 7.3 60 1-61 20-79 (258)
51 PRK07370 enoyl-(acyl carrier p 98.6 2.8E-07 6E-12 52.7 7.2 60 1-61 24-85 (258)
52 TIGR02415 23BDH acetoin reduct 98.6 3.1E-07 6.8E-12 51.9 7.3 60 1-61 16-75 (254)
53 PRK07024 short chain dehydroge 98.6 1.8E-07 3.9E-12 53.2 6.3 59 1-61 18-76 (257)
54 PRK08213 gluconate 5-dehydroge 98.6 3.2E-07 7E-12 52.1 7.2 60 1-61 28-87 (259)
55 KOG1199|consensus 98.6 2.4E-07 5.2E-12 51.3 6.3 58 1-62 25-82 (260)
56 PRK08416 7-alpha-hydroxysteroi 98.6 3.2E-07 7E-12 52.3 7.1 61 1-61 24-85 (260)
57 PRK06114 short chain dehydroge 98.6 4.5E-07 9.9E-12 51.5 7.6 60 1-61 24-84 (254)
58 COG0623 FabI Enoyl-[acyl-carri 98.6 3.8E-07 8.3E-12 52.1 7.0 61 1-63 24-84 (259)
59 PRK06113 7-alpha-hydroxysteroi 98.6 4.4E-07 9.5E-12 51.5 7.3 60 1-61 27-86 (255)
60 PRK07666 fabG 3-ketoacyl-(acyl 98.6 4.5E-07 9.8E-12 50.9 7.2 60 1-61 23-82 (239)
61 PRK13394 3-hydroxybutyrate deh 98.6 4.7E-07 1E-11 51.3 7.3 60 1-61 23-82 (262)
62 PRK12743 oxidoreductase; Provi 98.6 4.7E-07 1E-11 51.5 7.3 60 1-61 18-78 (256)
63 PRK12384 sorbitol-6-phosphate 98.6 5.4E-07 1.2E-11 51.1 7.4 61 1-61 18-79 (259)
64 PRK06138 short chain dehydroge 98.6 4.5E-07 9.7E-12 51.1 7.1 59 1-61 21-79 (252)
65 PRK08159 enoyl-(acyl carrier p 98.6 4.3E-07 9.4E-12 52.4 7.1 59 1-61 28-86 (272)
66 PRK08278 short chain dehydroge 98.6 6.7E-07 1.4E-11 51.5 7.6 60 1-61 22-88 (273)
67 KOG1200|consensus 98.6 2.4E-07 5.2E-12 52.0 5.5 60 1-62 30-89 (256)
68 PRK05650 short chain dehydroge 98.6 6.1E-07 1.3E-11 51.4 7.3 60 1-61 16-75 (270)
69 PRK12481 2-deoxy-D-gluconate 3 98.6 5.6E-07 1.2E-11 51.2 7.0 58 1-61 24-81 (251)
70 TIGR01500 sepiapter_red sepiap 98.6 4.9E-07 1.1E-11 51.4 6.8 61 1-61 16-81 (256)
71 PRK07102 short chain dehydroge 98.6 4.7E-07 1E-11 51.0 6.6 60 1-60 17-76 (243)
72 PRK12939 short chain dehydroge 98.6 6.8E-07 1.5E-11 50.3 7.3 60 1-61 23-82 (250)
73 KOG1208|consensus 98.6 5.3E-07 1.1E-11 53.4 6.9 61 1-61 51-112 (314)
74 PRK12826 3-ketoacyl-(acyl-carr 98.6 7.7E-07 1.7E-11 50.0 7.4 60 1-61 22-81 (251)
75 PLN00015 protochlorophyllide r 98.6 4.6E-07 9.9E-12 53.0 6.5 60 1-61 13-73 (308)
76 PRK06200 2,3-dihydroxy-2,3-dih 98.5 5.8E-07 1.3E-11 51.2 6.7 57 1-61 22-78 (263)
77 PRK12823 benD 1,6-dihydroxycyc 98.5 8.5E-07 1.8E-11 50.4 7.3 59 1-61 24-82 (260)
78 PRK07831 short chain dehydroge 98.5 8.9E-07 1.9E-11 50.4 7.4 61 1-61 34-95 (262)
79 PRK07774 short chain dehydroge 98.5 9.5E-07 2.1E-11 49.8 7.4 60 1-61 22-81 (250)
80 TIGR01289 LPOR light-dependent 98.5 5.9E-07 1.3E-11 52.8 6.8 60 1-61 19-79 (314)
81 PLN02253 xanthoxin dehydrogena 98.5 7.1E-07 1.5E-11 51.3 7.0 59 1-61 34-92 (280)
82 PRK08063 enoyl-(acyl carrier p 98.5 7.7E-07 1.7E-11 50.2 7.0 60 1-61 20-80 (250)
83 PRK08628 short chain dehydroge 98.5 7.7E-07 1.7E-11 50.5 7.0 59 1-61 23-81 (258)
84 PRK05872 short chain dehydroge 98.5 6.3E-07 1.4E-11 52.2 6.7 59 1-61 25-83 (296)
85 PRK08217 fabG 3-ketoacyl-(acyl 98.5 9.4E-07 2E-11 49.7 7.2 60 1-61 21-80 (253)
86 PRK06949 short chain dehydroge 98.5 8.6E-07 1.9E-11 50.2 7.1 60 1-61 25-84 (258)
87 TIGR01831 fabG_rel 3-oxoacyl-( 98.5 1.1E-06 2.4E-11 49.3 7.3 60 1-61 14-74 (239)
88 TIGR03206 benzo_BadH 2-hydroxy 98.5 1.1E-06 2.4E-11 49.5 7.2 60 1-61 19-78 (250)
89 PRK07889 enoyl-(acyl carrier p 98.5 6.8E-07 1.5E-11 51.0 6.4 57 1-61 25-83 (256)
90 PRK08251 short chain dehydroge 98.5 1.2E-06 2.7E-11 49.3 7.3 61 1-61 18-79 (248)
91 COG3967 DltE Short-chain dehyd 98.5 4.1E-07 8.8E-12 51.3 5.1 56 1-61 21-76 (245)
92 PRK06181 short chain dehydroge 98.5 1.2E-06 2.6E-11 49.8 7.2 60 1-61 17-76 (263)
93 PRK09242 tropinone reductase; 98.5 1.3E-06 2.8E-11 49.6 7.3 61 1-61 25-86 (257)
94 PRK08226 short chain dehydroge 98.5 1.2E-06 2.6E-11 49.8 7.2 59 1-61 22-80 (263)
95 PRK07453 protochlorophyllide o 98.5 9.1E-07 2E-11 52.0 6.8 58 1-59 22-79 (322)
96 PRK07201 short chain dehydroge 98.5 9E-07 1.9E-11 56.0 7.2 60 1-61 387-446 (657)
97 PRK07792 fabG 3-ketoacyl-(acyl 98.5 1.2E-06 2.6E-11 51.3 7.3 58 1-59 28-86 (306)
98 PRK06198 short chain dehydroge 98.5 1.2E-06 2.5E-11 49.7 7.0 60 1-61 22-82 (260)
99 PRK06940 short chain dehydroge 98.5 9.1E-07 2E-11 51.0 6.6 55 1-57 17-71 (275)
100 PRK05653 fabG 3-ketoacyl-(acyl 98.5 1.6E-06 3.5E-11 48.5 7.4 59 1-60 21-79 (246)
101 PRK07067 sorbitol dehydrogenas 98.5 1.2E-06 2.5E-11 49.8 6.9 57 1-61 22-78 (257)
102 PRK06128 oxidoreductase; Provi 98.5 1.7E-06 3.6E-11 50.5 7.6 60 1-61 71-132 (300)
103 PRK12859 3-ketoacyl-(acyl-carr 98.5 1.3E-06 2.8E-11 49.8 7.0 60 1-61 24-94 (256)
104 PRK08936 glucose-1-dehydrogena 98.5 1.5E-06 3.2E-11 49.5 7.3 60 1-61 23-83 (261)
105 PRK05717 oxidoreductase; Valid 98.5 1.2E-06 2.7E-11 49.7 6.9 57 1-61 26-82 (255)
106 KOG1014|consensus 98.5 8.7E-07 1.9E-11 52.2 6.3 58 2-59 66-123 (312)
107 PRK06484 short chain dehydroge 98.5 1E-06 2.2E-11 54.5 6.9 57 1-61 21-77 (520)
108 PRK06997 enoyl-(acyl carrier p 98.5 1.3E-06 2.7E-11 50.1 6.8 59 1-61 24-82 (260)
109 PRK07775 short chain dehydroge 98.5 1.5E-06 3.3E-11 49.9 7.2 60 1-61 26-85 (274)
110 TIGR03325 BphB_TodD cis-2,3-di 98.5 1.2E-06 2.6E-11 50.0 6.7 57 1-61 21-77 (262)
111 PRK07904 short chain dehydroge 98.5 1.6E-06 3.5E-11 49.5 7.2 58 1-59 24-84 (253)
112 TIGR01963 PHB_DH 3-hydroxybuty 98.5 1.7E-06 3.7E-11 48.8 7.2 59 1-60 17-75 (255)
113 PRK06125 short chain dehydroge 98.5 1.4E-06 2.9E-11 49.6 6.7 56 1-56 23-78 (259)
114 PRK07985 oxidoreductase; Provi 98.5 1.9E-06 4E-11 50.2 7.4 60 1-61 65-126 (294)
115 PRK12748 3-ketoacyl-(acyl-carr 98.5 1.8E-06 3.8E-11 49.1 7.1 60 1-61 23-93 (256)
116 PRK06197 short chain dehydroge 98.5 1.7E-06 3.8E-11 50.4 7.2 61 1-61 32-93 (306)
117 PRK09072 short chain dehydroge 98.4 1.6E-06 3.6E-11 49.4 6.8 57 1-59 21-77 (263)
118 PRK06484 short chain dehydroge 98.4 1.4E-06 3E-11 53.9 6.9 57 1-61 285-341 (520)
119 PRK07231 fabG 3-ketoacyl-(acyl 98.4 2.2E-06 4.7E-11 48.3 7.2 59 1-61 21-79 (251)
120 PRK07832 short chain dehydroge 98.4 1.8E-06 4E-11 49.5 7.0 60 1-61 16-76 (272)
121 PRK06123 short chain dehydroge 98.4 2.2E-06 4.7E-11 48.3 7.2 60 1-61 18-78 (248)
122 PF08659 KR: KR domain; Inter 98.4 7.8E-07 1.7E-11 48.7 4.9 60 1-61 16-79 (181)
123 PRK09186 flagellin modificatio 98.4 2.5E-06 5.4E-11 48.3 7.1 61 1-61 20-81 (256)
124 TIGR01830 3oxo_ACP_reduc 3-oxo 98.4 3.5E-06 7.6E-11 47.1 7.6 60 1-61 14-74 (239)
125 PRK06947 glucose-1-dehydrogena 98.4 2.9E-06 6.2E-11 47.9 7.1 60 1-61 18-78 (248)
126 PRK10538 malonic semialdehyde 98.4 2.5E-06 5.3E-11 48.3 6.8 57 1-61 16-72 (248)
127 PRK12747 short chain dehydroge 98.4 3.9E-06 8.5E-11 47.5 7.6 59 1-60 20-79 (252)
128 PRK12745 3-ketoacyl-(acyl-carr 98.4 3.4E-06 7.4E-11 47.7 7.4 60 1-61 18-78 (256)
129 PRK08993 2-deoxy-D-gluconate 3 98.4 3.3E-06 7.3E-11 48.0 7.3 58 1-61 26-83 (253)
130 PRK06701 short chain dehydroge 98.4 3.6E-06 7.8E-11 49.0 7.5 60 1-61 62-122 (290)
131 PRK07069 short chain dehydroge 98.4 3.6E-06 7.8E-11 47.4 7.3 61 1-61 15-77 (251)
132 PRK09730 putative NAD(P)-bindi 98.4 3E-06 6.6E-11 47.6 7.0 60 1-61 17-77 (247)
133 PRK12938 acetyacetyl-CoA reduc 98.4 3.9E-06 8.5E-11 47.3 7.2 60 1-61 19-79 (246)
134 PRK12746 short chain dehydroge 98.4 4E-06 8.6E-11 47.4 7.2 60 1-61 22-82 (254)
135 PRK08309 short chain dehydroge 98.4 3.9E-06 8.5E-11 46.1 6.9 60 1-62 15-74 (177)
136 PRK05565 fabG 3-ketoacyl-(acyl 98.4 4.3E-06 9.3E-11 46.9 7.3 60 1-61 21-81 (247)
137 TIGR01832 kduD 2-deoxy-D-gluco 98.4 4.3E-06 9.4E-11 47.1 7.3 58 1-61 21-78 (248)
138 TIGR01829 AcAcCoA_reduct aceto 98.4 4.4E-06 9.6E-11 46.8 7.3 60 1-61 16-76 (242)
139 PRK05875 short chain dehydroge 98.4 4.1E-06 8.8E-11 48.0 7.1 61 1-61 23-84 (276)
140 PRK07806 short chain dehydroge 98.4 5E-06 1.1E-10 46.9 7.4 60 1-61 22-82 (248)
141 PRK06500 short chain dehydroge 98.3 4.4E-06 9.5E-11 47.0 6.9 57 1-61 22-78 (249)
142 PRK12937 short chain dehydroge 98.3 5.8E-06 1.3E-10 46.4 7.4 60 1-61 21-81 (245)
143 PRK12935 acetoacetyl-CoA reduc 98.3 4.5E-06 9.8E-11 47.0 7.0 60 1-61 22-82 (247)
144 TIGR02685 pter_reduc_Leis pter 98.3 5.1E-06 1.1E-10 47.5 7.1 59 1-59 17-76 (267)
145 PRK06914 short chain dehydroge 98.3 5.1E-06 1.1E-10 47.7 7.0 60 1-61 19-79 (280)
146 PRK07041 short chain dehydroge 98.3 4.5E-06 9.8E-11 46.6 6.4 55 1-57 13-67 (230)
147 PRK06101 short chain dehydroge 98.3 2.9E-06 6.3E-11 47.9 5.6 53 1-58 17-69 (240)
148 PRK12744 short chain dehydroge 98.3 7.6E-06 1.6E-10 46.5 7.2 60 1-61 24-87 (257)
149 PRK09134 short chain dehydroge 98.3 7.7E-06 1.7E-10 46.5 7.2 60 1-61 25-85 (258)
150 PRK08267 short chain dehydroge 98.3 7.6E-06 1.6E-10 46.5 6.8 57 1-60 17-73 (260)
151 PRK06924 short chain dehydroge 98.3 5.5E-06 1.2E-10 46.8 6.1 57 1-61 17-74 (251)
152 PRK07074 short chain dehydroge 98.3 9.2E-06 2E-10 46.1 7.0 58 1-61 18-75 (257)
153 PRK12824 acetoacetyl-CoA reduc 98.3 9.6E-06 2.1E-10 45.5 7.0 60 1-61 18-78 (245)
154 PRK07825 short chain dehydroge 98.3 7.6E-06 1.6E-10 46.9 6.6 56 1-61 21-76 (273)
155 PRK05786 fabG 3-ketoacyl-(acyl 98.3 1.2E-05 2.6E-10 45.0 7.3 58 1-60 21-78 (238)
156 PRK06196 oxidoreductase; Provi 98.2 6.2E-06 1.3E-10 48.4 6.3 55 1-60 42-96 (315)
157 PRK08263 short chain dehydroge 98.2 9E-06 2E-10 46.7 6.6 57 1-61 19-75 (275)
158 PRK06180 short chain dehydroge 98.2 9E-06 2E-10 46.8 6.6 57 1-61 20-76 (277)
159 PRK09135 pteridine reductase; 98.2 1.5E-05 3.2E-10 44.8 7.3 61 1-61 22-83 (249)
160 PRK07326 short chain dehydroge 98.2 1.3E-05 2.8E-10 44.9 7.0 59 1-61 22-80 (237)
161 PRK12936 3-ketoacyl-(acyl-carr 98.2 1.4E-05 3E-10 44.9 7.0 57 1-61 22-78 (245)
162 PRK05557 fabG 3-ketoacyl-(acyl 98.2 2.1E-05 4.6E-10 44.0 7.5 60 1-61 21-81 (248)
163 PRK12828 short chain dehydroge 98.2 1.6E-05 3.5E-10 44.3 6.9 58 1-61 23-80 (239)
164 PRK06483 dihydromonapterin red 98.2 1.4E-05 3E-10 44.9 6.4 55 1-61 18-72 (236)
165 PRK06482 short chain dehydroge 98.2 1.5E-05 3.2E-10 45.7 6.6 57 1-61 18-74 (276)
166 PRK08945 putative oxoacyl-(acy 98.2 2.1E-05 4.6E-10 44.4 7.0 61 1-61 28-90 (247)
167 PRK13656 trans-2-enoyl-CoA red 98.2 2.1E-05 4.6E-10 48.0 7.2 60 1-62 59-130 (398)
168 TIGR02632 RhaD_aldol-ADH rhamn 98.1 1.9E-05 4.2E-10 50.9 7.3 61 1-61 430-491 (676)
169 PRK12827 short chain dehydroge 98.1 2.6E-05 5.6E-10 43.8 7.0 60 1-61 22-85 (249)
170 PRK12829 short chain dehydroge 98.1 3.4E-05 7.3E-10 43.8 7.2 58 1-61 27-84 (264)
171 PRK06841 short chain dehydroge 98.1 3.6E-05 7.8E-10 43.6 7.0 57 1-61 31-87 (255)
172 PRK06179 short chain dehydroge 98.1 1.4E-05 3E-10 45.7 5.1 52 1-61 20-71 (270)
173 PRK07856 short chain dehydroge 98.1 2.6E-05 5.7E-10 44.2 6.0 52 1-61 22-73 (252)
174 PRK06398 aldose dehydrogenase; 98.0 2.6E-05 5.6E-10 44.6 6.0 49 1-61 22-70 (258)
175 PRK08642 fabG 3-ketoacyl-(acyl 98.0 5.1E-05 1.1E-09 42.8 6.9 57 1-61 21-78 (253)
176 PRK06057 short chain dehydroge 98.0 3.8E-05 8.2E-10 43.6 6.4 55 1-61 23-77 (255)
177 PRK08703 short chain dehydroge 98.0 5E-05 1.1E-09 42.7 6.7 61 1-61 22-84 (239)
178 PLN02780 ketoreductase/ oxidor 98.0 4.1E-05 8.8E-10 45.3 6.4 46 1-46 69-115 (320)
179 PRK12825 fabG 3-ketoacyl-(acyl 98.0 7.1E-05 1.5E-09 41.9 7.0 59 1-60 22-81 (249)
180 PRK06077 fabG 3-ketoacyl-(acyl 98.0 7E-05 1.5E-09 42.2 7.1 60 1-61 22-82 (252)
181 PRK09291 short chain dehydroge 98.0 4E-05 8.7E-10 43.4 5.8 54 1-55 18-71 (257)
182 PRK05884 short chain dehydroge 98.0 3.6E-05 7.7E-10 43.2 5.5 53 1-59 16-68 (223)
183 PRK06182 short chain dehydroge 98.0 4.2E-05 9E-10 43.9 5.9 54 1-61 19-72 (273)
184 PRK06463 fabG 3-ketoacyl-(acyl 98.0 7.1E-05 1.5E-09 42.5 6.8 55 1-61 23-77 (255)
185 PRK08220 2,3-dihydroxybenzoate 98.0 5.4E-05 1.2E-09 42.7 6.1 51 1-61 24-74 (252)
186 PRK06523 short chain dehydroge 97.9 5E-05 1.1E-09 43.1 5.9 51 1-61 25-75 (260)
187 PRK05993 short chain dehydroge 97.9 6E-05 1.3E-09 43.5 6.0 53 1-60 20-72 (277)
188 KOG4169|consensus 97.9 4.9E-05 1.1E-09 43.7 5.4 59 2-61 22-81 (261)
189 PRK07023 short chain dehydroge 97.9 8.5E-05 1.9E-09 41.9 6.5 54 1-60 17-71 (243)
190 PRK08324 short chain dehydroge 97.9 7.9E-05 1.7E-09 48.1 6.9 59 1-61 438-496 (681)
191 PRK06171 sorbitol-6-phosphate 97.9 6.1E-05 1.3E-09 43.0 5.6 51 1-61 25-75 (266)
192 PRK08177 short chain dehydroge 97.8 0.00012 2.5E-09 41.0 5.8 53 1-59 17-69 (225)
193 smart00822 PKS_KR This enzymat 97.8 0.00022 4.8E-09 37.7 6.3 59 1-60 16-78 (180)
194 PRK05693 short chain dehydroge 97.8 0.00014 3.1E-09 41.7 5.8 54 1-61 17-70 (274)
195 PLN02730 enoyl-[acyl-carrier-p 97.8 0.00012 2.6E-09 43.3 5.5 60 1-61 27-118 (303)
196 TIGR02813 omega_3_PfaA polyket 97.6 0.00037 8E-09 50.6 7.3 33 27-60 2087-2119(2582)
197 PRK08264 short chain dehydroge 97.6 0.00023 4.9E-09 40.0 5.2 48 1-56 22-70 (238)
198 COG1028 FabG Dehydrogenases wi 97.6 0.00074 1.6E-08 38.2 6.9 60 1-61 21-84 (251)
199 KOG1610|consensus 97.6 0.00055 1.2E-08 40.9 6.3 58 1-61 45-102 (322)
200 PRK12428 3-alpha-hydroxysteroi 97.5 0.0002 4.3E-09 40.6 4.1 46 1-58 1-46 (241)
201 KOG1502|consensus 97.5 0.00028 6.1E-09 42.3 4.9 56 1-57 22-79 (327)
202 KOG1207|consensus 97.5 0.00029 6.3E-09 39.4 4.6 50 1-54 23-72 (245)
203 PRK08017 oxidoreductase; Provi 97.5 0.00069 1.5E-08 38.3 5.8 52 1-59 18-69 (256)
204 KOG1209|consensus 97.5 0.00071 1.5E-08 39.0 5.6 53 1-59 24-76 (289)
205 KOG1210|consensus 97.4 0.00053 1.2E-08 41.0 5.1 60 1-60 49-109 (331)
206 PRK06953 short chain dehydroge 97.4 0.00071 1.5E-08 37.7 5.4 51 1-58 17-67 (222)
207 PRK07060 short chain dehydroge 97.4 0.00084 1.8E-08 37.7 5.4 50 1-56 25-74 (245)
208 PRK12548 shikimate 5-dehydroge 97.4 0.00047 1E-08 40.5 4.2 63 1-66 141-207 (289)
209 TIGR02622 CDP_4_6_dhtase CDP-g 97.3 0.0013 2.8E-08 39.2 6.1 55 1-57 20-74 (349)
210 PLN03209 translocon at the inn 97.3 0.0015 3.2E-08 41.9 5.9 55 1-55 96-158 (576)
211 PRK08261 fabG 3-ketoacyl-(acyl 97.3 0.0026 5.6E-08 39.2 6.9 57 1-61 226-282 (450)
212 PLN02989 cinnamyl-alcohol dehy 97.2 0.0017 3.7E-08 38.1 5.7 56 1-56 21-77 (325)
213 PLN02583 cinnamoyl-CoA reducta 97.2 0.0018 3.8E-08 37.9 5.7 54 1-55 22-77 (297)
214 KOG1611|consensus 97.2 0.0032 6.8E-08 36.4 6.1 59 2-61 20-80 (249)
215 KOG1478|consensus 97.2 0.0042 9E-08 36.7 6.6 61 1-61 19-87 (341)
216 PRK07577 short chain dehydroge 97.1 0.0027 5.9E-08 35.4 5.6 48 1-60 19-66 (234)
217 PLN02896 cinnamyl-alcohol dehy 97.1 0.0027 5.8E-08 37.9 5.8 54 1-56 26-79 (353)
218 PRK08219 short chain dehydroge 96.9 0.0049 1.1E-07 34.2 5.2 50 1-56 19-68 (227)
219 PRK10675 UDP-galactose-4-epime 96.9 0.0083 1.8E-07 35.4 6.3 55 1-55 16-70 (338)
220 PLN02986 cinnamyl-alcohol dehy 96.9 0.0065 1.4E-07 35.7 5.8 56 1-56 21-77 (322)
221 TIGR01472 gmd GDP-mannose 4,6- 96.8 0.0054 1.2E-07 36.4 5.4 57 1-57 16-77 (343)
222 PLN02686 cinnamoyl-CoA reducta 96.8 0.0081 1.7E-07 36.3 6.1 56 1-57 69-129 (367)
223 PLN02650 dihydroflavonol-4-red 96.8 0.0075 1.6E-07 35.9 6.0 55 1-55 21-76 (351)
224 PLN02653 GDP-mannose 4,6-dehyd 96.8 0.0045 9.7E-08 36.7 4.9 56 1-57 22-82 (340)
225 PRK12742 oxidoreductase; Provi 96.8 0.0085 1.9E-07 33.5 5.7 50 1-56 22-72 (237)
226 PRK07424 bifunctional sterol d 96.8 0.0068 1.5E-07 37.5 5.6 51 1-55 194-244 (406)
227 TIGR03589 PseB UDP-N-acetylglu 96.8 0.0089 1.9E-07 35.5 5.9 53 1-56 20-74 (324)
228 KOG1371|consensus 96.7 0.012 2.5E-07 35.6 6.0 56 2-57 19-76 (343)
229 PF13460 NAD_binding_10: NADH( 96.7 0.012 2.6E-07 31.8 5.7 46 1-55 14-59 (183)
230 PLN02214 cinnamoyl-CoA reducta 96.7 0.013 2.7E-07 35.1 6.2 55 1-56 26-81 (342)
231 KOG2733|consensus 96.7 0.013 2.9E-07 36.0 6.1 56 2-57 22-84 (423)
232 COG1748 LYS9 Saccharopine dehy 96.6 0.0059 1.3E-07 37.6 4.3 53 1-57 16-69 (389)
233 PLN02657 3,8-divinyl protochlo 96.5 0.011 2.4E-07 36.1 5.4 56 1-57 76-133 (390)
234 PLN02662 cinnamyl-alcohol dehy 96.5 0.014 3E-07 34.2 5.4 56 1-56 20-76 (322)
235 TIGR01179 galE UDP-glucose-4-e 96.5 0.015 3.2E-07 33.8 5.5 54 1-56 15-68 (328)
236 PRK12367 short chain dehydroge 96.4 0.011 2.4E-07 33.9 4.7 48 1-54 30-77 (245)
237 PRK06300 enoyl-(acyl carrier p 96.4 0.0018 4E-08 38.3 1.5 17 1-17 26-42 (299)
238 cd01078 NAD_bind_H4MPT_DH NADP 96.3 0.023 5E-07 31.4 5.5 52 2-55 45-96 (194)
239 PLN02240 UDP-glucose 4-epimera 96.3 0.033 7.1E-07 33.1 6.5 55 1-56 21-79 (352)
240 PF03848 TehB: Tellurite resis 96.3 0.022 4.7E-07 32.0 5.4 43 2-45 45-87 (192)
241 PLN00198 anthocyanidin reducta 96.3 0.035 7.6E-07 32.9 6.4 54 1-56 25-80 (338)
242 PLN02572 UDP-sulfoquinovose sy 95.9 0.065 1.4E-06 33.4 6.6 56 1-56 63-134 (442)
243 TIGR02114 coaB_strep phosphopa 95.9 0.02 4.2E-07 32.8 3.9 48 1-61 31-78 (227)
244 PF01370 Epimerase: NAD depend 95.8 0.092 2E-06 29.2 6.5 51 1-57 14-64 (236)
245 TIGR03466 HpnA hopanoid-associ 95.8 0.026 5.6E-07 33.0 4.4 49 1-56 16-64 (328)
246 PF03435 Saccharop_dh: Sacchar 95.8 0.023 5E-07 34.5 4.3 53 2-57 14-68 (386)
247 TIGR01181 dTDP_gluc_dehyt dTDP 95.8 0.061 1.3E-06 31.2 5.7 54 1-56 15-71 (317)
248 COG1086 Predicted nucleoside-d 95.6 0.076 1.6E-06 34.4 6.1 56 1-56 266-323 (588)
249 PRK06550 fabG 3-ketoacyl-(acyl 95.6 0.039 8.4E-07 30.9 4.3 37 1-47 21-57 (235)
250 COG0569 TrkA K+ transport syst 95.4 0.051 1.1E-06 31.0 4.5 48 1-53 15-62 (225)
251 COG4982 3-oxoacyl-[acyl-carrie 95.4 0.092 2E-06 34.7 5.9 63 1-63 413-479 (866)
252 CHL00194 ycf39 Ycf39; Provisio 95.3 0.067 1.4E-06 31.6 4.7 49 1-56 16-64 (317)
253 PLN02427 UDP-apiose/xylose syn 95.2 0.072 1.6E-06 32.3 4.8 56 1-56 30-86 (386)
254 PRK15181 Vi polysaccharide bio 95.2 0.12 2.6E-06 31.0 5.7 56 1-56 31-90 (348)
255 COG1087 GalE UDP-glucose 4-epi 95.1 0.08 1.7E-06 32.0 4.7 50 1-56 16-65 (329)
256 PRK07578 short chain dehydroge 95.1 0.058 1.3E-06 29.6 3.9 37 1-56 16-52 (199)
257 PRK09009 C factor cell-cell si 95.0 0.1 2.2E-06 29.2 4.9 47 1-56 16-64 (235)
258 PRK10217 dTDP-glucose 4,6-dehy 95.0 0.1 2.2E-06 31.1 5.0 53 1-56 17-72 (355)
259 PF05368 NmrA: NmrA-like famil 94.7 0.17 3.6E-06 28.5 5.2 51 1-56 14-64 (233)
260 PF01073 3Beta_HSD: 3-beta hyd 94.5 0.081 1.8E-06 31.1 3.8 53 1-57 13-67 (280)
261 PLN00141 Tic62-NAD(P)-related 94.5 0.14 3.1E-06 29.2 4.6 42 1-47 33-74 (251)
262 PF02254 TrkA_N: TrkA-N domain 94.4 0.15 3.3E-06 25.6 4.3 45 1-52 13-57 (116)
263 PF02719 Polysacc_synt_2: Poly 94.1 0.06 1.3E-06 32.1 2.6 55 1-55 14-74 (293)
264 PRK10084 dTDP-glucose 4,6 dehy 94.0 0.33 7.1E-06 28.9 5.7 53 1-56 16-71 (352)
265 PF03446 NAD_binding_2: NAD bi 93.7 0.094 2E-06 28.3 2.7 56 1-56 16-77 (163)
266 PRK04148 hypothetical protein; 93.6 0.16 3.5E-06 27.1 3.4 39 2-47 32-70 (134)
267 KOG2865|consensus 93.4 0.24 5.3E-06 30.1 4.2 50 2-56 78-130 (391)
268 TIGR03840 TMPT_Se_Te thiopurin 92.8 0.41 8.9E-06 27.2 4.5 24 2-25 49-72 (213)
269 COG1255 Uncharacterized protei 92.4 0.24 5.2E-06 26.0 2.9 20 1-20 28-47 (129)
270 PF02737 3HCDH_N: 3-hydroxyacy 92.0 0.27 5.9E-06 27.1 3.1 29 1-29 14-42 (180)
271 TIGR03649 ergot_EASG ergot alk 91.8 0.31 6.7E-06 28.2 3.3 45 1-55 15-59 (285)
272 PRK10669 putative cation:proto 91.2 0.53 1.2E-05 30.2 4.1 44 1-51 432-475 (558)
273 PF01488 Shikimate_DH: Shikima 91.1 0.75 1.6E-05 24.1 4.1 28 2-29 28-56 (135)
274 PRK13255 thiopurine S-methyltr 91.0 0.9 2E-05 25.9 4.5 24 2-25 52-75 (218)
275 COG1089 Gmd GDP-D-mannose dehy 90.9 0.4 8.7E-06 29.1 3.1 58 1-59 18-79 (345)
276 PRK13256 thiopurine S-methyltr 90.9 0.71 1.5E-05 26.7 4.1 45 2-47 58-115 (226)
277 KOG0409|consensus 90.5 0.38 8.2E-06 29.2 2.8 26 1-26 50-75 (327)
278 KOG2304|consensus 90.5 0.58 1.3E-05 27.6 3.5 31 1-31 26-56 (298)
279 TIGR01724 hmd_rel H2-forming N 90.4 0.58 1.3E-05 28.6 3.6 21 1-21 35-55 (341)
280 PF04131 NanE: Putative N-acet 90.3 2.1 4.6E-05 24.3 6.0 49 2-54 57-109 (192)
281 PRK06843 inosine 5-monophospha 90.3 2.8 6.1E-05 26.4 6.5 53 2-55 158-213 (404)
282 PRK07819 3-hydroxybutyryl-CoA 90.3 0.53 1.1E-05 27.8 3.3 26 1-26 20-45 (286)
283 PRK09496 trkA potassium transp 90.0 1.4 3E-05 27.3 5.1 46 1-51 246-291 (453)
284 cd01075 NAD_bind_Leu_Phe_Val_D 90.0 0.43 9.2E-06 26.8 2.6 28 1-28 43-70 (200)
285 PRK05865 hypothetical protein; 89.8 1.2 2.5E-05 30.6 4.9 46 1-56 16-61 (854)
286 TIGR01302 IMP_dehydrog inosine 89.7 2.7 5.9E-05 26.6 6.2 53 2-55 229-284 (450)
287 PTZ00314 inosine-5'-monophosph 89.7 3.4 7.4E-05 26.6 6.7 53 2-55 246-301 (495)
288 PLN02350 phosphogluconate dehy 89.4 2.7 5.9E-05 27.1 6.0 27 1-27 21-47 (493)
289 PRK14106 murD UDP-N-acetylmura 89.2 1.2 2.6E-05 27.7 4.4 31 1-31 20-51 (450)
290 TIGR00477 tehB tellurite resis 89.2 1.6 3.5E-05 24.3 4.5 27 2-28 45-71 (195)
291 PF07015 VirC1: VirC1 protein; 88.8 3.2 7E-05 24.2 5.7 29 1-29 22-51 (231)
292 PLN02274 inosine-5'-monophosph 88.7 3.5 7.7E-05 26.6 6.2 53 2-55 253-308 (505)
293 PRK07807 inosine 5-monophospha 88.3 4.5 9.8E-05 26.0 6.5 53 2-55 232-287 (479)
294 PRK05579 bifunctional phosphop 88.2 1.6 3.6E-05 27.2 4.5 45 1-57 220-264 (399)
295 PRK12335 tellurite resistance 88.0 2.6 5.6E-05 24.9 5.1 30 2-31 135-164 (287)
296 COG2263 Predicted RNA methylas 87.4 2.6 5.5E-05 24.0 4.5 45 3-48 61-106 (198)
297 PRK09260 3-hydroxybutyryl-CoA 87.3 0.96 2.1E-05 26.6 3.0 26 1-26 16-41 (288)
298 COG3268 Uncharacterized conser 87.3 0.67 1.5E-05 28.6 2.4 50 1-56 22-71 (382)
299 PF00478 IMPDH: IMP dehydrogen 87.2 2.1 4.6E-05 26.4 4.5 54 2-56 113-169 (352)
300 PRK07530 3-hydroxybutyryl-CoA 86.9 1.2 2.5E-05 26.3 3.2 26 1-26 19-44 (292)
301 PRK11207 tellurite resistance 86.9 3.2 6.8E-05 23.1 4.8 29 2-30 45-73 (197)
302 COG2084 MmsB 3-hydroxyisobutyr 86.8 2.8 6.1E-05 25.2 4.8 55 1-55 15-76 (286)
303 COG2185 Sbm Methylmalonyl-CoA 86.8 3.5 7.5E-05 22.3 6.3 58 1-60 32-90 (143)
304 COG3010 NanE Putative N-acetyl 86.8 4.4 9.5E-05 23.5 5.6 49 2-54 91-144 (229)
305 PF02310 B12-binding: B12 bind 86.7 2.7 6E-05 21.1 6.2 56 2-59 21-77 (121)
306 COG0505 CarA Carbamoylphosphat 86.7 5.7 0.00012 24.8 6.4 55 1-61 193-247 (368)
307 PRK09287 6-phosphogluconate de 86.5 0.85 1.8E-05 29.0 2.6 27 1-27 5-31 (459)
308 TIGR02279 PaaC-3OHAcCoADH 3-hy 86.5 1.1 2.5E-05 28.7 3.2 25 1-25 20-44 (503)
309 PRK08268 3-hydroxy-acyl-CoA de 86.2 1.2 2.7E-05 28.5 3.2 25 1-25 22-46 (507)
310 TIGR01182 eda Entner-Doudoroff 86.1 4.6 9.9E-05 23.1 6.4 53 2-55 26-78 (204)
311 TIGR01746 Thioester-redct thio 85.9 5.3 0.00011 23.6 6.3 47 1-47 15-73 (367)
312 PRK07066 3-hydroxybutyryl-CoA 85.9 1.5 3.1E-05 26.7 3.3 24 1-24 22-45 (321)
313 PRK06035 3-hydroxyacyl-CoA deh 85.8 1.4 3.1E-05 25.9 3.2 25 1-25 18-42 (291)
314 PLN02695 GDP-D-mannose-3',5'-e 85.8 2.6 5.7E-05 25.7 4.4 47 1-54 37-83 (370)
315 PLN02545 3-hydroxybutyryl-CoA 85.3 1.6 3.5E-05 25.7 3.2 24 1-24 19-42 (295)
316 TIGR01214 rmlD dTDP-4-dehydror 85.1 2.2 4.8E-05 24.6 3.7 18 1-18 15-32 (287)
317 TIGR00507 aroE shikimate 5-deh 84.8 1.7 3.6E-05 25.4 3.2 30 1-30 132-161 (270)
318 PRK08293 3-hydroxybutyryl-CoA 84.8 1.8 3.9E-05 25.5 3.3 27 1-27 18-44 (287)
319 PF01591 6PF2K: 6-phosphofruct 84.7 5.1 0.00011 23.1 5.0 64 4-68 90-156 (222)
320 PRK11908 NAD-dependent epimera 84.7 4.4 9.5E-05 24.2 5.0 49 1-55 17-67 (347)
321 PRK03659 glutathione-regulated 84.6 2.5 5.4E-05 27.7 4.1 44 2-52 416-459 (601)
322 PF04321 RmlD_sub_bind: RmlD s 84.6 2.9 6.3E-05 24.6 4.1 14 3-16 18-31 (286)
323 PRK06129 3-hydroxyacyl-CoA deh 84.4 1.8 3.9E-05 25.7 3.2 24 1-24 17-40 (308)
324 COG0451 WcaG Nucleoside-diphos 84.2 1.8 4E-05 25.1 3.2 20 1-20 16-35 (314)
325 PRK02472 murD UDP-N-acetylmura 84.0 2.5 5.4E-05 26.3 3.8 32 1-32 20-51 (447)
326 COG0702 Predicted nucleoside-d 83.9 3.8 8.3E-05 23.2 4.4 48 1-56 16-63 (275)
327 COG3010 NanE Putative N-acetyl 83.6 6.6 0.00014 22.8 6.0 54 2-59 173-227 (229)
328 PF03721 UDPG_MGDP_dh_N: UDP-g 83.5 1.1 2.3E-05 25.0 1.9 22 2-23 16-37 (185)
329 COG3453 Uncharacterized protei 83.4 5 0.00011 21.3 4.6 53 3-56 22-82 (130)
330 TIGR00873 gnd 6-phosphoglucona 83.4 1.5 3.2E-05 28.0 2.7 27 1-27 14-40 (467)
331 PF12847 Methyltransf_18: Meth 82.9 4.1 9E-05 20.0 5.2 43 2-44 16-61 (112)
332 TIGR01692 HIBADH 3-hydroxyisob 82.6 1.8 3.9E-05 25.5 2.7 25 1-25 11-35 (288)
333 PRK14968 putative methyltransf 82.6 5.4 0.00012 21.5 4.5 42 2-44 38-82 (188)
334 PRK07107 inosine 5-monophospha 82.4 11 0.00024 24.5 6.3 54 2-55 247-303 (502)
335 PRK05458 guanosine 5'-monophos 82.3 9.1 0.0002 23.5 6.3 53 2-55 102-159 (326)
336 TIGR00262 trpA tryptophan synt 82.2 8 0.00017 22.7 6.5 52 3-55 109-161 (256)
337 PF01081 Aldolase: KDPG and KH 82.2 7.1 0.00015 22.2 5.5 53 2-55 26-78 (196)
338 PF03808 Glyco_tran_WecB: Glyc 82.2 6.3 0.00014 21.6 6.8 58 3-60 42-100 (172)
339 PTZ00142 6-phosphogluconate de 82.1 1.9 4.1E-05 27.6 2.8 28 1-28 16-43 (470)
340 PRK11036 putative S-adenosyl-L 82.0 5 0.00011 23.2 4.3 30 2-31 59-88 (255)
341 PRK00258 aroE shikimate 5-dehy 81.8 2.4 5.1E-05 25.0 3.0 30 1-30 138-168 (278)
342 PLN02260 probable rhamnose bio 81.7 8.1 0.00018 25.5 5.6 51 1-54 22-76 (668)
343 PRK15461 NADH-dependent gamma- 81.4 2.1 4.6E-05 25.3 2.8 25 1-25 16-40 (296)
344 PRK03692 putative UDP-N-acetyl 81.4 8.6 0.00019 22.5 6.9 55 5-59 101-155 (243)
345 COG2227 UbiG 2-polyprenyl-3-me 81.2 1.7 3.7E-05 25.5 2.2 26 1-26 73-98 (243)
346 PF03686 UPF0146: Uncharacteri 81.1 1.8 3.9E-05 23.0 2.1 20 1-20 28-47 (127)
347 PRK03562 glutathione-regulated 81.0 4.2 9.1E-05 26.8 4.1 43 2-51 416-458 (621)
348 PRK03525 crotonobetainyl-CoA:c 80.9 6.9 0.00015 24.5 4.9 67 2-69 30-98 (405)
349 TIGR00872 gnd_rel 6-phosphoglu 80.6 2.4 5.1E-05 25.2 2.7 26 1-26 15-40 (298)
350 COG2085 Predicted dinucleotide 80.5 3.1 6.7E-05 24.0 3.1 29 1-29 16-45 (211)
351 TIGR01505 tartro_sem_red 2-hyd 80.4 2.3 5E-05 25.0 2.7 24 1-24 14-37 (291)
352 PRK09599 6-phosphogluconate de 80.4 2.4 5.2E-05 25.1 2.7 25 1-25 15-39 (301)
353 PLN02520 bifunctional 3-dehydr 80.3 2.4 5.2E-05 27.4 2.9 29 1-29 394-422 (529)
354 PRK09496 trkA potassium transp 79.8 6.5 0.00014 24.4 4.6 23 2-24 16-38 (453)
355 KOG1372|consensus 79.3 10 0.00022 23.0 4.9 57 2-58 45-106 (376)
356 TIGR01915 npdG NADPH-dependent 79.0 3.8 8.3E-05 23.2 3.2 27 1-27 16-42 (219)
357 cd01065 NAD_bind_Shikimate_DH 78.8 4 8.7E-05 21.4 3.1 28 2-29 35-63 (155)
358 PF01210 NAD_Gly3P_dh_N: NAD-d 78.8 2.3 5E-05 22.8 2.1 26 2-27 15-40 (157)
359 TIGR00521 coaBC_dfp phosphopan 78.6 6.9 0.00015 24.5 4.4 44 1-56 217-261 (390)
360 COG0169 AroE Shikimate 5-dehyd 78.5 4.8 0.0001 24.1 3.5 31 2-32 142-173 (283)
361 TIGR00537 hemK_rel_arch HemK-r 78.5 8.7 0.00019 20.9 4.8 42 2-44 34-75 (179)
362 PRK12549 shikimate 5-dehydroge 78.4 8.5 0.00018 22.9 4.6 30 2-31 143-173 (284)
363 PRK06130 3-hydroxybutyryl-CoA 77.9 4.3 9.3E-05 24.1 3.3 27 1-27 19-45 (311)
364 PRK12490 6-phosphogluconate de 77.8 3.2 7E-05 24.6 2.7 25 1-25 15-39 (299)
365 PF03807 F420_oxidored: NADP o 77.2 3.9 8.5E-05 19.7 2.6 29 1-29 14-46 (96)
366 cd04724 Tryptophan_synthase_al 77.1 12 0.00026 21.7 6.4 53 2-55 97-150 (242)
367 PRK11730 fadB multifunctional 76.7 4 8.8E-05 27.4 3.2 25 1-25 328-352 (715)
368 COG4007 Predicted dehydrogenas 76.6 4.4 9.5E-05 24.5 3.0 32 1-32 36-68 (340)
369 cd02067 B12-binding B12 bindin 76.2 8.3 0.00018 19.5 6.7 57 2-60 20-77 (119)
370 PLN00016 RNA-binding protein; 76.0 5.2 0.00011 24.4 3.3 20 1-20 72-91 (378)
371 COG1064 AdhP Zn-dependent alco 75.8 9.4 0.0002 23.6 4.3 23 2-24 182-205 (339)
372 TIGR00696 wecB_tagA_cpsF bacte 75.7 12 0.00025 20.9 6.8 55 4-59 43-98 (177)
373 PF05724 TPMT: Thiopurine S-me 75.4 4.7 0.0001 23.1 2.9 27 2-28 52-78 (218)
374 TIGR01303 IMP_DH_rel_1 IMP deh 75.4 19 0.00042 23.2 6.6 53 2-55 230-285 (475)
375 TIGR02437 FadB fatty oxidation 75.4 4.7 0.0001 27.1 3.2 26 1-26 328-353 (714)
376 PRK05808 3-hydroxybutyryl-CoA 75.2 5 0.00011 23.5 3.0 23 1-23 18-40 (282)
377 PF13649 Methyltransf_25: Meth 75.1 8.1 0.00018 18.8 4.7 37 10-47 25-61 (101)
378 cd02070 corrinoid_protein_B12- 74.9 13 0.00027 20.9 6.8 57 2-60 103-160 (201)
379 COG1250 FadB 3-hydroxyacyl-CoA 74.7 5.3 0.00011 24.3 3.0 29 1-29 18-46 (307)
380 PRK06015 keto-hydroxyglutarate 74.2 14 0.0003 21.1 6.3 54 1-55 21-74 (201)
381 PRK14618 NAD(P)H-dependent gly 73.7 4.8 0.0001 24.1 2.8 26 1-26 19-44 (328)
382 PF09547 Spore_IV_A: Stage IV 73.7 19 0.00042 23.4 5.3 58 4-61 175-236 (492)
383 PF08241 Methyltransf_11: Meth 73.6 7.9 0.00017 18.0 4.0 29 2-30 11-40 (95)
384 PRK08125 bifunctional UDP-gluc 73.6 13 0.00028 24.7 4.8 43 1-49 331-374 (660)
385 TIGR02441 fa_ox_alpha_mit fatt 73.1 5.2 0.00011 27.1 3.0 28 1-28 350-377 (737)
386 PF05175 MTS: Methyltransferas 73.1 13 0.00028 20.2 4.8 43 2-45 46-91 (170)
387 CHL00200 trpA tryptophan synth 72.8 17 0.00037 21.5 6.8 51 3-54 113-164 (263)
388 PRK07531 bifunctional 3-hydrox 72.7 6.2 0.00013 25.3 3.2 24 1-24 19-42 (495)
389 cd04131 Rnd Rnd subfamily. Th 72.7 13 0.00029 20.2 6.1 28 34-61 72-99 (178)
390 cd02071 MM_CoA_mut_B12_BD meth 72.7 11 0.00024 19.3 6.2 57 2-60 20-77 (122)
391 KOG0820|consensus 72.5 12 0.00026 22.8 4.1 44 2-46 73-118 (315)
392 PRK05096 guanosine 5'-monophos 72.5 15 0.00032 22.9 4.6 52 3-55 114-170 (346)
393 PF12146 Hydrolase_4: Putative 72.3 3.8 8.2E-05 19.6 1.7 17 1-17 35-51 (79)
394 PF00670 AdoHcyase_NAD: S-aden 72.1 4.8 0.0001 22.2 2.3 21 1-21 38-58 (162)
395 cd01080 NAD_bind_m-THF_DH_Cycl 72.0 6.9 0.00015 21.5 2.9 23 2-24 61-83 (168)
396 PF01861 DUF43: Protein of unk 72.0 12 0.00026 22.1 4.0 36 9-45 67-102 (243)
397 PF09445 Methyltransf_15: RNA 71.8 15 0.00032 20.3 4.9 44 2-46 14-59 (163)
398 TIGR03026 NDP-sugDHase nucleot 71.6 4 8.6E-05 25.4 2.1 24 1-24 15-38 (411)
399 PRK11064 wecC UDP-N-acetyl-D-m 71.6 4.9 0.00011 25.2 2.5 24 1-24 18-41 (415)
400 PF13847 Methyltransf_31: Meth 71.5 13 0.00028 19.5 5.2 38 9-47 28-66 (152)
401 cd04172 Rnd3_RhoE_Rho8 Rnd3/Rh 71.4 15 0.00032 20.2 6.9 28 34-61 76-103 (182)
402 PRK06732 phosphopantothenate-- 71.4 4.1 9E-05 23.4 2.0 17 1-17 32-48 (229)
403 cd06533 Glyco_transf_WecG_TagA 71.0 15 0.00033 20.1 6.7 31 4-34 41-71 (171)
404 TIGR01809 Shik-DH-AROM shikima 70.9 7.2 0.00016 23.1 3.0 28 2-29 141-169 (282)
405 PRK11430 putative CoA-transfer 70.7 16 0.00036 22.7 4.6 67 2-69 28-103 (381)
406 KOG2550|consensus 69.8 17 0.00037 23.4 4.5 58 3-61 257-317 (503)
407 TIGR03253 oxalate_frc formyl-C 69.7 25 0.00054 22.1 5.7 67 2-69 22-98 (415)
408 TIGR00007 phosphoribosylformim 69.5 18 0.0004 20.5 5.9 53 2-55 151-209 (230)
409 PF02353 CMAS: Mycolic acid cy 69.4 11 0.00024 22.4 3.5 43 2-45 77-122 (273)
410 PRK12557 H(2)-dependent methyl 69.2 12 0.00025 23.0 3.7 20 1-20 35-54 (342)
411 PRK03522 rumB 23S rRNA methylu 69.2 17 0.00036 21.9 4.3 43 2-45 188-231 (315)
412 COG1091 RfbD dTDP-4-dehydrorha 68.8 12 0.00025 22.6 3.5 46 12-59 3-51 (281)
413 KOG3957|consensus 68.5 22 0.00047 22.3 4.6 49 3-58 24-72 (387)
414 PRK11559 garR tartronate semia 68.3 7.2 0.00016 22.9 2.6 23 1-23 17-39 (296)
415 PLN02858 fructose-bisphosphate 68.2 15 0.00032 26.9 4.4 26 1-26 19-44 (1378)
416 COG1023 Gnd Predicted 6-phosph 68.1 6.3 0.00014 23.6 2.3 25 1-25 15-39 (300)
417 cd00381 IMPDH IMPDH: The catal 68.0 25 0.00054 21.4 6.7 53 2-55 99-154 (325)
418 PRK12550 shikimate 5-dehydroge 67.3 8.1 0.00018 22.9 2.7 28 2-29 138-166 (272)
419 PRK00748 1-(5-phosphoribosyl)- 67.2 21 0.00045 20.2 5.9 54 2-56 152-211 (233)
420 PRK14194 bifunctional 5,10-met 67.2 8.9 0.00019 23.3 2.9 24 1-24 175-198 (301)
421 PF06414 Zeta_toxin: Zeta toxi 67.2 20 0.00042 19.9 5.6 57 3-60 87-145 (199)
422 PF08643 DUF1776: Fungal famil 67.0 15 0.00032 22.4 3.8 54 3-60 22-75 (299)
423 PRK08269 3-hydroxybutyryl-CoA 66.8 13 0.00027 22.5 3.5 20 1-20 5-24 (314)
424 PRK05398 formyl-coenzyme A tra 66.6 30 0.00065 21.8 5.2 67 2-69 23-99 (416)
425 PRK00094 gpsA NAD(P)H-dependen 66.3 8.5 0.00018 22.8 2.7 26 1-26 16-41 (325)
426 PRK09310 aroDE bifunctional 3- 65.9 9.5 0.00021 24.4 3.0 28 1-28 347-374 (477)
427 cd01874 Cdc42 Cdc42 subfamily. 65.4 20 0.00043 19.3 6.2 23 34-56 72-94 (175)
428 cd00452 KDPG_aldolase KDPG and 65.4 21 0.00046 19.7 6.4 51 2-53 22-72 (190)
429 KOG2730|consensus 65.4 12 0.00025 22.2 3.0 46 3-49 110-157 (263)
430 PRK14027 quinate/shikimate deh 65.4 11 0.00023 22.5 3.0 30 2-31 143-173 (283)
431 PRK05718 keto-hydroxyglutarate 65.4 24 0.00052 20.3 6.2 51 2-53 33-83 (212)
432 PRK07417 arogenate dehydrogena 65.3 9.5 0.00021 22.4 2.8 24 1-24 15-38 (279)
433 TIGR00095 RNA methyltransferas 65.3 22 0.00047 19.8 4.1 42 2-44 64-108 (189)
434 PLN02725 GDP-4-keto-6-deoxyman 65.2 13 0.00029 21.5 3.4 15 1-15 13-27 (306)
435 PLN02166 dTDP-glucose 4,6-dehy 64.7 20 0.00044 22.7 4.2 18 1-18 136-153 (436)
436 TIGR02370 pyl_corrinoid methyl 64.5 23 0.0005 19.9 6.7 57 2-60 105-162 (197)
437 PF07993 NAD_binding_4: Male s 64.3 25 0.00054 20.1 5.2 47 2-48 13-73 (249)
438 PRK02261 methylaspartate mutas 64.1 20 0.00044 19.0 6.7 57 2-60 24-81 (137)
439 PRK12320 hypothetical protein; 63.7 19 0.00041 24.5 4.1 37 1-47 16-52 (699)
440 PF02579 Nitro_FeMo-Co: Dinitr 63.6 15 0.00033 17.5 3.3 32 2-37 46-77 (94)
441 COG0240 GpsA Glycerol-3-phosph 63.4 9.4 0.0002 23.5 2.5 26 1-26 16-41 (329)
442 TIGR00640 acid_CoA_mut_C methy 63.3 21 0.00045 18.9 5.6 57 2-60 23-80 (132)
443 PRK14967 putative methyltransf 63.2 25 0.00055 19.8 4.5 41 3-44 52-93 (223)
444 PLN02206 UDP-glucuronate decar 63.0 23 0.0005 22.5 4.2 18 1-18 135-152 (442)
445 PRK07201 short chain dehydroge 62.9 41 0.00088 22.1 5.9 44 2-47 17-63 (657)
446 cd04174 Rnd1_Rho6 Rnd1/Rho6 su 62.8 28 0.0006 20.1 7.1 26 34-59 84-109 (232)
447 KOG2728|consensus 62.7 9.6 0.00021 22.9 2.4 18 2-19 66-83 (302)
448 COG2910 Putative NADH-flavin r 62.6 14 0.00029 21.3 2.9 21 2-22 17-37 (211)
449 PF04273 DUF442: Putative phos 62.5 20 0.00043 18.4 5.6 53 3-56 21-81 (110)
450 PRK06552 keto-hydroxyglutarate 62.4 28 0.0006 20.0 6.6 53 2-54 31-85 (213)
451 PRK06522 2-dehydropantoate 2-r 62.3 12 0.00026 21.9 2.8 22 2-23 16-37 (304)
452 PF02558 ApbA: Ketopantoate re 61.9 12 0.00027 19.5 2.6 22 2-24 14-35 (151)
453 PF13450 NAD_binding_8: NAD(P) 61.9 15 0.00033 16.8 2.7 19 2-20 12-30 (68)
454 TIGR02853 spore_dpaA dipicolin 61.6 12 0.00027 22.3 2.8 22 1-22 166-187 (287)
455 smart00650 rADc Ribosomal RNA 61.2 24 0.00053 19.0 4.0 42 2-45 28-69 (169)
456 PRK06849 hypothetical protein; 61.2 36 0.00079 20.9 6.4 20 1-20 20-39 (389)
457 COG2890 HemK Methylase of poly 61.1 32 0.00069 20.5 4.4 43 1-44 124-169 (280)
458 PRK09140 2-dehydro-3-deoxy-6-p 61.1 29 0.00062 19.8 6.4 12 2-13 28-39 (206)
459 TIGR02021 BchM-ChlM magnesium 60.8 28 0.0006 19.5 4.8 41 2-43 70-112 (219)
460 COG2927 HolC DNA polymerase II 60.8 16 0.00035 19.9 2.9 28 2-29 22-49 (144)
461 PRK05567 inosine 5'-monophosph 60.6 43 0.00093 21.6 6.4 53 2-55 233-288 (486)
462 cd02037 MRP-like MRP (Multiple 60.4 9 0.0002 20.5 1.9 17 2-18 21-37 (169)
463 TIGR03197 MnmC_Cterm tRNA U-34 60.2 11 0.00024 23.0 2.4 18 1-18 1-18 (381)
464 PF04413 Glycos_transf_N: 3-De 60.2 28 0.00061 19.4 4.3 56 2-61 41-98 (186)
465 TIGR01777 yfcH conserved hypot 60.2 9.8 0.00021 21.8 2.2 20 1-20 14-33 (292)
466 KOG2305|consensus 60.1 19 0.00042 21.5 3.3 25 2-26 19-43 (313)
467 PF13606 Ank_3: Ankyrin repeat 60.1 4.1 9E-05 15.6 0.4 11 2-12 18-28 (30)
468 TIGR02085 meth_trns_rumB 23S r 59.9 29 0.00062 21.5 4.2 43 2-45 248-291 (374)
469 PF08362 TetR_C_3: YcdC-like p 59.7 15 0.00032 19.8 2.6 26 43-68 118-143 (143)
470 COG1088 RfbB dTDP-D-glucose 4, 59.6 40 0.00087 21.0 4.6 22 35-56 51-72 (340)
471 KOG0023|consensus 59.0 42 0.00092 21.0 5.3 45 4-55 199-245 (360)
472 PTZ00338 dimethyladenosine tra 59.0 34 0.00074 20.6 4.3 44 2-46 51-96 (294)
473 PRK10537 voltage-gated potassi 59.0 25 0.00054 22.1 3.8 42 2-52 256-297 (393)
474 COG1512 Beta-propeller domains 58.9 24 0.00052 21.2 3.6 43 19-61 48-90 (271)
475 PF14552 Tautomerase_2: Tautom 58.9 11 0.00025 18.2 2.0 34 36-69 28-64 (82)
476 TIGR03438 probable methyltrans 58.3 38 0.00082 20.3 4.9 45 2-46 78-126 (301)
477 cd02040 NifH NifH gene encodes 58.2 11 0.00024 21.7 2.1 20 1-20 21-40 (270)
478 TIGR01663 PNK-3'Pase polynucle 58.2 52 0.0011 21.7 5.4 45 2-47 413-459 (526)
479 TIGR01305 GMP_reduct_1 guanosi 58.1 44 0.00095 20.9 6.4 52 3-55 113-169 (343)
480 PRK08091 ribulose-phosphate 3- 57.9 36 0.00078 19.9 6.6 53 2-56 84-140 (228)
481 KOG1430|consensus 57.9 17 0.00036 22.8 2.9 54 2-57 21-77 (361)
482 COG0036 Rpe Pentose-5-phosphat 57.8 36 0.00078 19.9 6.5 53 2-55 77-130 (220)
483 smart00174 RHO Rho (Ras homolo 57.7 27 0.00059 18.4 5.8 26 34-59 69-94 (174)
484 COG0362 Gnd 6-phosphogluconate 57.6 16 0.00035 23.5 2.8 28 2-29 19-46 (473)
485 PRK08883 ribulose-phosphate 3- 57.5 35 0.00076 19.6 6.5 53 2-55 74-127 (220)
486 TIGR02129 hisA_euk phosphoribo 57.5 39 0.00084 20.1 5.5 17 2-18 44-61 (253)
487 PF01656 CbiA: CobQ/CobB/MinD/ 57.4 9.7 0.00021 20.5 1.8 20 1-20 19-38 (195)
488 TIGR02440 FadJ fatty oxidation 57.2 19 0.00041 24.3 3.3 25 1-25 319-344 (699)
489 PRK01438 murD UDP-N-acetylmura 57.2 33 0.00071 21.7 4.2 31 2-32 32-63 (480)
490 PRK13586 1-(5-phosphoribosyl)- 57.0 37 0.0008 19.7 4.1 42 2-44 88-130 (232)
491 cd02032 Bchl_like This family 56.9 11 0.00023 21.9 2.0 19 1-19 20-38 (267)
492 PHA02518 ParA-like protein; Pr 56.9 12 0.00027 20.5 2.2 19 2-20 22-40 (211)
493 TIGR01675 plant-AP plant acid 56.9 24 0.00051 20.6 3.3 30 3-32 130-160 (229)
494 PRK13230 nitrogenase reductase 56.8 11 0.00024 22.0 2.0 20 1-20 21-40 (279)
495 PF00107 ADH_zinc_N: Zinc-bind 56.8 25 0.00054 17.7 4.1 19 5-23 10-28 (130)
496 KOG1202|consensus 56.7 65 0.0014 24.5 5.7 56 2-58 1785-1844(2376)
497 PRK07580 Mg-protoporphyrin IX 56.6 34 0.00073 19.1 4.6 29 2-30 78-106 (230)
498 PRK13185 chlL protochlorophyll 56.3 11 0.00025 21.7 2.0 19 1-19 22-40 (270)
499 PRK05370 argininosuccinate syn 56.2 53 0.0012 21.3 6.1 11 36-46 37-47 (447)
500 PRK14620 NAD(P)H-dependent gly 56.0 16 0.00035 21.9 2.6 23 2-24 16-38 (326)
No 1
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.00 E-value=2.4e-09 Score=61.87 Aligned_cols=60 Identities=12% Similarity=0.100 Sum_probs=54.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+|+.|+++|++|+++.|+.+++.++.++++..++..+.++++|+++++++..+.+++.+.
T Consensus 22 ~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 22 LAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred HHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 478999999999999999999999999998765678899999999999999999988876
No 2
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.93 E-value=7.5e-09 Score=59.08 Aligned_cols=59 Identities=24% Similarity=0.183 Sum_probs=52.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKIL 62 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 62 (69)
+|+.|+++|++|++.+|+.++++++..++.+ ..+.....||+|.++++.++..+.++++
T Consensus 22 ~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 22 TARALAEAGAKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred HHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 5899999999999999999999988888742 4678899999999999999999988874
No 3
>KOG1201|consensus
Probab=98.93 E-value=8.9e-09 Score=60.18 Aligned_cols=60 Identities=32% Similarity=0.480 Sum_probs=54.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKIL 62 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 62 (69)
||..|++.|++++++|.+.+...++.+++++. | ++..+.||+|+.+++.++.+++.++++
T Consensus 54 ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g-~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 54 IALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G-EAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred HHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 57899999999999999998889999999876 5 889999999999999999999999875
No 4
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.92 E-value=1.1e-08 Score=57.69 Aligned_cols=61 Identities=10% Similarity=0.106 Sum_probs=52.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKIL 62 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 62 (69)
+++.|++.|++|++.+|+.+.++++.+.+... +.++..+.+|++++++++.+++++.++++
T Consensus 21 ia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 21 ISCHFARLGATLILCDQDQSALKDTYEQCSAL-TDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred HHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 47899999999999999888888887777665 66778899999999999999999887754
No 5
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.87 E-value=2.1e-08 Score=56.86 Aligned_cols=60 Identities=22% Similarity=0.280 Sum_probs=51.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+..+++...+... +.++..+.+|+++++++.++++++.+.+
T Consensus 25 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 25 VALAYVEAGAQVAIAARHLDALEKLADEIGTS-GGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred HHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 47899999999999999877777777777665 6677889999999999999999988765
No 6
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.87 E-value=1.4e-08 Score=57.27 Aligned_cols=59 Identities=14% Similarity=0.250 Sum_probs=48.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
||++|+++|++|++++++.++.+...+.+.+.++.. .+.+|++++++++.+++.+.+.+
T Consensus 12 ia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~ 70 (241)
T PF13561_consen 12 IARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERF 70 (241)
T ss_dssp HHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhc
Confidence 589999999999999998887666666665542434 59999999999999999999886
No 7
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.86 E-value=2.3e-08 Score=56.64 Aligned_cols=60 Identities=22% Similarity=0.240 Sum_probs=51.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.++.+.+.+.+... +.++.++.+|++++++++.+++++.+++
T Consensus 22 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 22 AAKLFAREGAKVVVGARRQAELDQLVAEIRAE-GGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 47899999999999999887777777777665 6678889999999999999999988764
No 8
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.83 E-value=3.1e-08 Score=58.67 Aligned_cols=60 Identities=17% Similarity=0.104 Sum_probs=51.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+.++++.+++... +.++.++.+|++++++++++++.+.+.+
T Consensus 23 ia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 23 TAEAFARRGARLVLAARDEEALQAVAEECRAL-GAEVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 47889999999999999888888888888766 7778889999999999999999987654
No 9
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.82 E-value=4e-08 Score=57.60 Aligned_cols=60 Identities=20% Similarity=0.158 Sum_probs=48.1
Q ss_pred CHHHHHHcCCeEEEeecCc----------chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQK----------DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|++.|++|++++|+. +..+.+.+.+... +.++.++.+|++++++++.+++++.+.+
T Consensus 24 ia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 93 (305)
T PRK08303 24 IAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-GGRGIAVQVDHLVPEQVRALVERIDREQ 93 (305)
T ss_pred HHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999988763 3445556666555 5667789999999999999999998765
No 10
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.82 E-value=3.9e-08 Score=55.89 Aligned_cols=60 Identities=23% Similarity=0.303 Sum_probs=50.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHh--hCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQ--VAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..++..+.+.. . +.++.++.+|+++++++..+++++.+++
T Consensus 23 ~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 23 IARAFAREGAAVALADLDAALAERAAAAIARDVA-GARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccC-CceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999988777777777765 3 4567889999999999999999988765
No 11
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.81 E-value=3.5e-08 Score=56.17 Aligned_cols=59 Identities=12% Similarity=0.214 Sum_probs=49.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..++..+++... + .+.++.+|++++++++++++++.+++
T Consensus 16 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~Dv~d~~~~~~~~~~~~~~~ 74 (259)
T PRK08340 16 VARELLKKGARVVISSRNEENLEKALKELKEY-G-EVYAVKADLSDKDDLKNLVKEAWELL 74 (259)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEcCCCCHHHHHHHHHHHHHhc
Confidence 47899999999999999877777777777654 3 57789999999999999999987764
No 12
>KOG0725|consensus
Probab=98.81 E-value=4.7e-08 Score=56.71 Aligned_cols=61 Identities=26% Similarity=0.353 Sum_probs=52.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC--CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA--PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
||+.|++.|++|++++++.+.++.....+.... +.++..+.||++++++++++++.+.+++
T Consensus 24 ia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 24 IALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 589999999999999999888888887776541 2358899999999999999999998884
No 13
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.80 E-value=4.5e-08 Score=56.46 Aligned_cols=60 Identities=25% Similarity=0.362 Sum_probs=50.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++.+.+++..+.+... +.++.++.+|+++++++.++++++.+.+
T Consensus 22 la~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 22 TGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-GFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999998877777777777655 6678889999999999999999987664
No 14
>PRK08589 short chain dehydrogenase; Validated
Probab=98.80 E-value=5.1e-08 Score=55.99 Aligned_cols=59 Identities=24% Similarity=0.291 Sum_probs=49.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++ +...+..+.+.+. +.++..+.+|+++++++..+++.+.+.+
T Consensus 22 ia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 22 SAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-GGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred HHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-CCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 478999999999999888 6667777777655 5678889999999999999999988764
No 15
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.80 E-value=4.5e-08 Score=57.97 Aligned_cols=60 Identities=22% Similarity=0.232 Sum_probs=51.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++|+.+.+++..+++... +.++.++.+|++|+++++.+++.+.+++
T Consensus 24 la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 24 TARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 47889999999999999887777777777766 7788889999999999999999887765
No 16
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.78 E-value=6.5e-08 Score=54.80 Aligned_cols=60 Identities=28% Similarity=0.287 Sum_probs=49.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++....++..+.+... +.++.++.+|++++++++++++++.+.+
T Consensus 17 ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK07677 17 MAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-PGQVLTVQMDVRNPEDVQKMVEQIDEKF 76 (252)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 47889999999999998877777776666654 5678889999999999999999987764
No 17
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.77 E-value=6.9e-08 Score=55.94 Aligned_cols=60 Identities=20% Similarity=0.251 Sum_probs=49.0
Q ss_pred CHHHHHHcCCeEEEeecCc---------chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQK---------DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++++. +..++..+++... +.++.++.+|+++++++.++++.+.+++
T Consensus 22 ia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (286)
T PRK07791 22 HALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-GGEAVANGDDIADWDGAANLVDAAVETF 90 (286)
T ss_pred HHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-CCceEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 4789999999999887654 5566666777655 6678889999999999999999988765
No 18
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.77 E-value=6e-08 Score=55.70 Aligned_cols=59 Identities=20% Similarity=0.172 Sum_probs=45.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++++ .+.++..+++... .....++.+|++++++++.+++.+.+++
T Consensus 24 ia~~la~~G~~vil~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 24 IAQAMHREGAELAFTYQN-DKLKGRVEEFAAQ-LGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred HHHHHHHCCCEEEEEecc-hhHHHHHHHHHhc-cCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 478999999999988876 3344445555543 3445678999999999999999988765
No 19
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.76 E-value=7.3e-08 Score=54.64 Aligned_cols=60 Identities=18% Similarity=0.103 Sum_probs=50.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++.+++.+..+...+.+... +.++.++.+|++++++++.+++.+.+.+
T Consensus 26 ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 26 LAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-GLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 47889999999999999877777777777655 5678889999999999999999887653
No 20
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.76 E-value=8.5e-08 Score=54.29 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=50.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..+.+..++... +.++.++.+|++++++++.+++.+.+++
T Consensus 21 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 21 LAVRAARAGADVVLAARTAERLDEVAAEIDDL-GRRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-CCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999998877777777777655 5678889999999999999999987765
No 21
>KOG1205|consensus
Probab=98.76 E-value=5.9e-08 Score=56.62 Aligned_cols=62 Identities=18% Similarity=0.191 Sum_probs=52.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCc-eeEEEccCCCHHHHHHHHHHHHHHhh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGA-AKGYYCDVGNVDSVDLRIGLDFRKIL 62 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~~~~~v~~~~~~~~ 62 (69)
+|+.|++.|++++++.+...+++...+++++..... +..+++|++|.+++.++++.+..+++
T Consensus 28 lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 28 LAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred HHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 478899999999998888888888878887663334 88999999999999999999987763
No 22
>PRK08643 acetoin reductase; Validated
Probab=98.75 E-value=9.1e-08 Score=54.22 Aligned_cols=60 Identities=18% Similarity=0.227 Sum_probs=50.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..++....+... +.++.++.+|+++++++.++++.+.+++
T Consensus 18 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (256)
T PRK08643 18 IAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GGKAIAVKADVSDRDQVFAAVRQVVDTF 77 (256)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999998877777777777655 5677889999999999999999988764
No 23
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.75 E-value=8.7e-08 Score=54.70 Aligned_cols=60 Identities=22% Similarity=0.438 Sum_probs=50.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|++.|++|++.+++.+...+..+.+... +.++.++.+|+++++++.++++++.+.+
T Consensus 26 ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 26 IAKAYAKAGATIVFNDINQELVDKGLAAYREL-GIEAHGYVCDVTDEDGVQAMVSQIEKEV 85 (265)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 47889999999999888877777777777655 6678889999999999999999988765
No 24
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.75 E-value=8.5e-08 Score=54.92 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=47.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDF 58 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 58 (69)
+|+.|+++|++|++++|+.+.+++..+.+....+.++.++.+|++++++++.+++++.
T Consensus 24 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 24 VARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 4789999999999999987777777766654324567889999999999999999874
No 25
>PRK06720 hypothetical protein; Provisional
Probab=98.74 E-value=1.2e-07 Score=51.67 Aligned_cols=60 Identities=23% Similarity=0.313 Sum_probs=49.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+..+...+++... +....++.+|+++.++++++++++.+.+
T Consensus 32 ia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 32 TALLLAKQGAKVIVTDIDQESGQATVEEITNL-GGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46789999999999998877666666676654 5567788999999999999999888765
No 26
>PRK05599 hypothetical protein; Provisional
Probab=98.74 E-value=8.6e-08 Score=54.40 Aligned_cols=59 Identities=12% Similarity=0.054 Sum_probs=49.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCC-ceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPG-AAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+ +|++|++++|+.++++++.+++++. +. .+.++.+|++++++++++++++.+.+
T Consensus 16 ia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 75 (246)
T PRK05599 16 IATLLC-HGEDVVLAARRPEAAQGLASDLRQR-GATSVHVLSFDAQDLDTHRELVKQTQELA 75 (246)
T ss_pred HHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-cCCceEEEEcccCCHHHHHHHHHHHHHhc
Confidence 477888 5999999999888888888888765 43 47789999999999999999988764
No 27
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.74 E-value=1.1e-07 Score=53.83 Aligned_cols=60 Identities=32% Similarity=0.381 Sum_probs=50.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++++|+.+..++..+.+... +.++.++.+|+++.+++.++++.+.+.+
T Consensus 23 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 23 TALAFAREGAKVVVADRDAAGGEETVALIREA-GGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 47889999999999999877777777777655 6678889999999999999999987764
No 28
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.74 E-value=1.1e-07 Score=54.20 Aligned_cols=61 Identities=13% Similarity=0.059 Sum_probs=49.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCC-CceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAP-GAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++|+.++.++..+.+...++ .++..+.+|+++++++.++++++.+.+
T Consensus 24 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 24 TVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999987777777766654422 367789999999999999999988764
No 29
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.73 E-value=1.1e-07 Score=54.49 Aligned_cols=60 Identities=27% Similarity=0.290 Sum_probs=50.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++++++.+..+.+.+.+... +.++.++.+|+++++++..+++.+.+++
T Consensus 26 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 26 MAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEALAVKADVLDKESLEQARQQILEDF 85 (278)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999998877777777777655 6678889999999999999999887764
No 30
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.71 E-value=1.3e-07 Score=53.63 Aligned_cols=60 Identities=20% Similarity=0.164 Sum_probs=50.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++++++.+...+...++... +.++..+.+|++++++++.+++.+.+++
T Consensus 25 ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 25 LATGLAEYGAEIIINDITAERAELAVAKLRQE-GIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 47899999999999999877777777777655 5567788999999999999999887654
No 31
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.71 E-value=1.2e-07 Score=54.25 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=43.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++.+++. +..+..+++... ......+.+|++++++++++++.+.+++
T Consensus 24 ~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 24 IAKACREQGAELAFTYVVD-KLEERVRKMAAE-LDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred HHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhc-cCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 5789999999999877653 333334444332 2334578999999999999999998875
No 32
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.71 E-value=1.4e-07 Score=54.96 Aligned_cols=60 Identities=27% Similarity=0.433 Sum_probs=50.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++|+.+.++++.+.+... +.++.++.+|+++++++.++++.+.+.+
T Consensus 56 la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 56 AAEQFARRGATVVAVARREDLLDAVADRITRA-GGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47889999999999999877777777777655 5677889999999999999999887654
No 33
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.70 E-value=1.4e-07 Score=55.31 Aligned_cols=61 Identities=15% Similarity=0.034 Sum_probs=49.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++|+.++.++..+++.... +..+.++.+|+++.++++++++++.+.+
T Consensus 30 ~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 30 LARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 478999999999999998877777777775432 2367889999999999999999987654
No 34
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.70 E-value=1.4e-07 Score=54.50 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=42.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|++|+++|++|++++++.. ..+..+.+....+.. ..+.+|++++++++.+++.+.+++
T Consensus 23 iA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 23 IAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDL 81 (274)
T ss_pred HHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence 57899999999999888743 222233332221334 578999999999999999998765
No 35
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.70 E-value=1.6e-07 Score=53.22 Aligned_cols=60 Identities=18% Similarity=0.159 Sum_probs=50.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+.++.....++.. +.++.++.+|+++++++..+++.+...+
T Consensus 27 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 27 IARALAGAGAHVLVNGRNAATLEAAVAALRAA-GGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred HHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999877777777777665 6678889999999999999999987754
No 36
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.70 E-value=1.7e-07 Score=53.05 Aligned_cols=60 Identities=18% Similarity=0.279 Sum_probs=50.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+..+.+.+.+.+. +....++.+|+++.++++.+++++.+.+
T Consensus 24 l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 24 IAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA-GGKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999998877777777777655 5667789999999999999999987765
No 37
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.70 E-value=1.7e-07 Score=52.75 Aligned_cols=60 Identities=22% Similarity=0.256 Sum_probs=49.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++|+.+....+.+.+... +.++.++.+|+++++++..+++.+.+++
T Consensus 22 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 22 TALAFAKAGWDLALVARSQDALEALAAELRST-GVKAAAYSIDLSNPEAIAPGIAELLEQF 81 (241)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47889999999999999877666666666654 5678889999999999999999887654
No 38
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.69 E-value=1.4e-07 Score=53.70 Aligned_cols=57 Identities=16% Similarity=0.147 Sum_probs=43.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|++|+++|++|++++++. +..+..+++. +..+.++.+|++++++++++++.+.+++
T Consensus 25 ~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 25 CAQAIKDQGATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred HHHHHHHCCCEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 4789999999999988863 3333333332 3357788999999999999999988765
No 39
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.69 E-value=1.8e-07 Score=53.38 Aligned_cols=60 Identities=18% Similarity=0.206 Sum_probs=49.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++|+.+..+++.+.+... +.++.++.+|+++++++.++++++.+.+
T Consensus 26 ~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 26 IALAFAEAGADVLIAARTESQLDEVAEQIRAA-GRRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47889999999999999877667766666554 5677888999999999999999987764
No 40
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.69 E-value=1.8e-07 Score=53.48 Aligned_cols=58 Identities=12% Similarity=0.105 Sum_probs=43.1
Q ss_pred CHHHHHHcCCeEEEeecCcc---hHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKD---LNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++.+++.. .++++.+++. +.++.++.+|++++++++.+++++.+++
T Consensus 25 ia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 25 IARSLHNAGAKLVFTYAGERLEKEVRELADTLE---GQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred HHHHHHHCCCEEEEecCcccchHHHHHHHHHcC---CCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 57899999999998876432 2333333321 3467788999999999999999998765
No 41
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.68 E-value=1.8e-07 Score=53.47 Aligned_cols=59 Identities=15% Similarity=-0.017 Sum_probs=42.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++.+++. ..++..+++....+. ...+.+|++++++++++++.+.+++
T Consensus 26 ~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 26 IAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred HHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHc
Confidence 4789999999999887763 333344444332132 3467899999999999999988765
No 42
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.68 E-value=1.8e-07 Score=53.93 Aligned_cols=59 Identities=22% Similarity=0.247 Sum_probs=42.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++.+++....+...+...+. +. ...+++|++++++++.+++.+.+++
T Consensus 25 iA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-g~-~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 25 IAKQLAAQGAELAFTYQGEALGKRVKPLAESL-GS-DFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred HHHHHHhCCCEEEEecCchHHHHHHHHHHHhc-CC-ceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 57899999999999887643333322222222 32 3468999999999999999998775
No 43
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.67 E-value=1.8e-07 Score=53.37 Aligned_cols=57 Identities=14% Similarity=0.196 Sum_probs=46.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++|+.+..++....+ +.++.++.+|+++++++.++++.+.+.+
T Consensus 22 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 22 VARALVAAGARVAIVDIDADNGAAVAASL----GERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 47899999999999998866555544443 4567788999999999999999987765
No 44
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.67 E-value=2.7e-07 Score=52.43 Aligned_cols=59 Identities=12% Similarity=0.148 Sum_probs=47.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++ ...+++.+.+... +.++.++.+|+++.++++.+++++.+.+
T Consensus 31 ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 31 YAVALAKAGADIIITTHG-TNWDETRRLIEKE-GRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred HHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999999999998876 4455566666554 5678889999999999999999988765
No 45
>PRK06194 hypothetical protein; Provisional
Probab=98.66 E-value=2.5e-07 Score=53.25 Aligned_cols=60 Identities=20% Similarity=0.218 Sum_probs=49.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..++....+... +.++.++.+|+++.+++.++++.+.+.+
T Consensus 22 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 22 FARIGAALGMKLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred HHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999998877667776666654 5578889999999999999999887654
No 46
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.66 E-value=2.6e-07 Score=52.87 Aligned_cols=60 Identities=23% Similarity=0.281 Sum_probs=48.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+......+.+... +.+..++.+|+++++++.++++.+.+.+
T Consensus 25 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 25 IAQAFARAGANVAVASRSQEKVDAAVAQLQQA-GPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999998877666666666554 5567788999999999999999987654
No 47
>PRK05855 short chain dehydrogenase; Validated
Probab=98.65 E-value=2e-07 Score=57.73 Aligned_cols=60 Identities=25% Similarity=0.398 Sum_probs=51.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++++++.+.++++.+.++.. +.++.++.+|+++++++.++++.+.+.+
T Consensus 331 ~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 331 TALAFAREGAEVVASDIDEAAAERTAELIRAA-GAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 47889999999999999887777777777665 6678889999999999999999987654
No 48
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.65 E-value=2.7e-07 Score=49.24 Aligned_cols=60 Identities=18% Similarity=0.262 Sum_probs=49.1
Q ss_pred CHHHHHHcCCe-EEEeecC--cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCK-VACAEIQ--KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~-V~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|+. |++++++ .+..+++.+.+... +.++.++.+|++++++++++++.+.+..
T Consensus 16 ~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 16 LARALARRGARVVILTSRSEDSEGAQELIQELKAP-GAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp HHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT-TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCceEEEEeeeccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence 47899999775 5667777 56677777777766 7788999999999999999999998654
No 49
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.65 E-value=2.6e-07 Score=52.76 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=42.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++++....+ ..+.+... .....++.+|++++++++++++.+.+++
T Consensus 28 ~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 28 CARAFRALGAELAVTYLNDKARP-YVEPLAEE-LDAPIFLPLDVREPGQLEAVFARIAEEW 86 (258)
T ss_pred HHHHHHHcCCEEEEEeCChhhHH-HHHHHHHh-hccceEEecCcCCHHHHHHHHHHHHHHc
Confidence 47899999999999888654322 22333222 1234578999999999999999998765
No 50
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.64 E-value=3e-07 Score=51.94 Aligned_cols=60 Identities=22% Similarity=0.409 Sum_probs=50.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++++|+.+..+....++... +.++..+.+|++++++++.+++.+.+.+
T Consensus 20 la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 20 IALALAKEGAKVVIADLNDEAAAAAAEALQKA-GGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999999877777777777655 6678889999999999999999887653
No 51
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.64 E-value=2.8e-07 Score=52.68 Aligned_cols=60 Identities=13% Similarity=0.156 Sum_probs=44.9
Q ss_pred CHHHHHHcCCeEEEeecCcc--hHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKD--LNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|++.|++|++.+++.+ +.++..+++... +..+.++.+|++++++++++++.+.+++
T Consensus 24 ia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 85 (258)
T PRK07370 24 IAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP-LNPSLFLPCDVQDDAQIEETFETIKQKW 85 (258)
T ss_pred HHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc-cCcceEeecCcCCHHHHHHHHHHHHHHc
Confidence 57899999999988765432 334445555444 4456688999999999999999998765
No 52
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.64 E-value=3.1e-07 Score=51.87 Aligned_cols=60 Identities=32% Similarity=0.411 Sum_probs=49.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++........+.+... +.++.++.+|++++++++++++.+.+.+
T Consensus 16 la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 75 (254)
T TIGR02415 16 IAERLAKDGFAVAVADLNEETAKETAKEINQA-GGKAVAYKLDVSDKDQVFSAIDQAAEKF 75 (254)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999988876666666777655 6678889999999999999999987764
No 53
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.64 E-value=1.8e-07 Score=53.21 Aligned_cols=59 Identities=19% Similarity=0.206 Sum_probs=47.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+.++++.+.+... + ++.++.+|+++++++.++++.+.+++
T Consensus 18 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dl~~~~~i~~~~~~~~~~~ 76 (257)
T PRK07024 18 LAREYARQGATLGLVARRTDALQAFAARLPKA-A-RVSVYAADVRDADALAAAAADFIAAH 76 (257)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC-C-eeEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 47889999999999998876666665555433 3 67889999999999999999887654
No 54
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.63 E-value=3.2e-07 Score=52.10 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=49.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|++.|++|++++++.++.+.....+... +.++.++.+|++++++++.+++.+.+.+
T Consensus 28 la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 28 IAEALGEAGARVVLSARKAEELEEAAAHLEAL-GIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 47889999999999988877666666666555 5677789999999999999999887754
No 55
>KOG1199|consensus
Probab=98.63 E-value=2.4e-07 Score=51.32 Aligned_cols=58 Identities=19% Similarity=0.161 Sum_probs=51.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKIL 62 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 62 (69)
++++|+++|+.|++.+....+..+..+++ |.++.|.+.|+++++++..++..+..+++
T Consensus 25 taerlakqgasv~lldlp~skg~~vakel----g~~~vf~padvtsekdv~aala~ak~kfg 82 (260)
T KOG1199|consen 25 TAERLAKQGASVALLDLPQSKGADVAKEL----GGKVVFTPADVTSEKDVRAALAKAKAKFG 82 (260)
T ss_pred HHHHHHhcCceEEEEeCCcccchHHHHHh----CCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence 37899999999999998877777776665 78899999999999999999999988874
No 56
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.63 E-value=3.2e-07 Score=52.30 Aligned_cols=61 Identities=15% Similarity=0.099 Sum_probs=46.9
Q ss_pred CHHHHHHcCCeEEEeec-CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEI-QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|+++++ +.+..+...+.++...+.++.++.+|++++++++++++.+.+++
T Consensus 24 ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 24 IVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 47899999999988754 44555655566654325578899999999999999999987764
No 57
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.62 E-value=4.5e-07 Score=51.48 Aligned_cols=60 Identities=18% Similarity=0.212 Sum_probs=48.3
Q ss_pred CHHHHHHcCCeEEEeecCcc-hHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKD-LNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|++.|++|++++++.+ ..++..+.+... +.++..+.+|+++++++.++++++.+.+
T Consensus 24 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 24 IAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-GRRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred HHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999887654 346666666655 6677889999999999999999987754
No 58
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.62 E-value=3.8e-07 Score=52.07 Aligned_cols=61 Identities=25% Similarity=0.221 Sum_probs=47.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhhc
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKILS 63 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~ 63 (69)
||+.+.++|+.++++...+ ++.+-...+.+. -.....++||+++.++++.++.++.++++.
T Consensus 24 IAk~l~~~GAeL~fTy~~e-~l~krv~~la~~-~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~ 84 (259)
T COG0623 24 IAKALAEQGAELAFTYQGE-RLEKRVEELAEE-LGSDLVLPCDVTNDESIDALFATIKKKWGK 84 (259)
T ss_pred HHHHHHHcCCEEEEEeccH-HHHHHHHHHHhh-ccCCeEEecCCCCHHHHHHHHHHHHHhhCc
Confidence 6889999999999987765 444444444433 223567899999999999999999998854
No 59
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.61 E-value=4.4e-07 Score=51.52 Aligned_cols=60 Identities=23% Similarity=0.438 Sum_probs=49.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++.+..+....++... +.++.++.+|+++.+++.+++..+.+.+
T Consensus 27 la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 27 IAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47889999999999888777777766666655 6678888999999999999999887654
No 60
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.61 E-value=4.5e-07 Score=50.92 Aligned_cols=60 Identities=15% Similarity=0.121 Sum_probs=49.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++|+.+..++...++... +.++.++.+|+++++++..+++.+.+++
T Consensus 23 l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 23 VAIALAKEGVNVGLLARTEENLKAVAEEVEAY-GVKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46789999999999998877666666666554 6678889999999999999999886653
No 61
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.60 E-value=4.7e-07 Score=51.30 Aligned_cols=60 Identities=33% Similarity=0.432 Sum_probs=50.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++.+++++...+..+.+... +.++.++.+|+++.+++..+++.+...+
T Consensus 23 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 23 IALELARAGAAVAIADLNQDGANAVADEINKA-GGKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred HHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-CceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999999887777777777665 6677889999999999999999876543
No 62
>PRK12743 oxidoreductase; Provisional
Probab=98.60 E-value=4.7e-07 Score=51.46 Aligned_cols=60 Identities=17% Similarity=0.123 Sum_probs=48.6
Q ss_pred CHHHHHHcCCeEEEee-cCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAE-IQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|+++. ++.+..+.+.+.+... +.++.++.+|++++++++.+++++.+++
T Consensus 18 ~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 18 CALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-GVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4789999999998864 4555566666777665 6778899999999999999999988765
No 63
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.60 E-value=5.4e-07 Score=51.14 Aligned_cols=61 Identities=23% Similarity=0.196 Sum_probs=48.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCC-CceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAP-GAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|++.|++|++++++....+.....+...++ .++.++.+|+++++++..+++++.+.+
T Consensus 18 la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 18 LCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF 79 (259)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4788999999999999887766666666654312 467889999999999999999887654
No 64
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.60 E-value=4.5e-07 Score=51.13 Aligned_cols=59 Identities=24% Similarity=0.326 Sum_probs=47.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+........+. . +.++.++.+|++++++++++++.+.+++
T Consensus 21 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 21 TAKLFAREGARVVVADRDAEAAERVAAAIA-A-GGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred HHHHHHHCCCeEEEecCCHHHHHHHHHHHh-c-CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478899999999999888766666555554 3 5667889999999999999999887754
No 65
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.59 E-value=4.3e-07 Score=52.36 Aligned_cols=59 Identities=19% Similarity=0.110 Sum_probs=42.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++++.. ..+..+.+.+..+ ....+.+|++++++++++++.+.+++
T Consensus 28 ia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 28 IAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred HHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhc
Confidence 58899999999988877532 2222333322213 34568999999999999999998765
No 66
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.58 E-value=6.7e-07 Score=51.46 Aligned_cols=60 Identities=20% Similarity=0.260 Sum_probs=46.7
Q ss_pred CHHHHHHcCCeEEEeecCcch-------HHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDL-------NEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+. +.+..+.+... +.++.++.+|+++++++..+++.+.+.+
T Consensus 22 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 88 (273)
T PRK08278 22 IALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GGQALPLVGDVRDEDQVAAAVAKAVERF 88 (273)
T ss_pred HHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 478899999999988876432 33444555554 6678889999999999999999987664
No 67
>KOG1200|consensus
Probab=98.58 E-value=2.4e-07 Score=52.04 Aligned_cols=60 Identities=22% Similarity=0.334 Sum_probs=49.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKIL 62 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 62 (69)
|+..|++.|++|++.+++...++++...+... .+...|.||+++..+++.++++..+.++
T Consensus 30 ia~~la~~Garv~v~dl~~~~A~ata~~L~g~--~~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 30 IAQLLAKKGARVAVADLDSAAAEATAGDLGGY--GDHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred HHHHHHhcCcEEEEeecchhhHHHHHhhcCCC--CccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 57889999999999988877777777776432 3677899999999999999999888764
No 68
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.57 E-value=6.1e-07 Score=51.36 Aligned_cols=60 Identities=25% Similarity=0.368 Sum_probs=50.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+..+.+...+... +.++.++.+|+++++++..+++.+.+.+
T Consensus 16 la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 75 (270)
T PRK05650 16 IALRWAREGWRLALADVNEEGGEETLKLLREA-GGDGFYQRCDVRDYSQLTALAQACEEKW 75 (270)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47889999999999998877777777777665 6678889999999999999998887654
No 69
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.57 E-value=5.6e-07 Score=51.18 Aligned_cols=58 Identities=16% Similarity=0.190 Sum_probs=45.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|++|+++|++|++++++. .+...+.+... +.++.++.+|++++++++++++++.+.+
T Consensus 24 ia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 24 MAIGLAKAGADIVGVGVAE--APETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred HHHHHHHCCCEEEEecCch--HHHHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999887753 23344445444 5678889999999999999999987765
No 70
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.57 E-value=4.9e-07 Score=51.44 Aligned_cols=61 Identities=10% Similarity=0.015 Sum_probs=48.5
Q ss_pred CHHHHHH----cCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFAR----QGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~----~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|++ .|++|++++|+.+.++++.+++.... +..+.++.+|++++++++.+++.+.+.+
T Consensus 16 ~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 16 IAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred HHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 4677876 79999999998877777777776421 3467789999999999999999887653
No 71
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.57 E-value=4.7e-07 Score=51.03 Aligned_cols=60 Identities=13% Similarity=-0.024 Sum_probs=47.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
++++|+++|++|++++++.+..+...+.+....+.++.++.+|++++++++.+++.+...
T Consensus 17 ~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (243)
T PRK07102 17 CARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPAL 76 (243)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhc
Confidence 478999999999999998776666666655432457888999999999999999887553
No 72
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.57 E-value=6.8e-07 Score=50.28 Aligned_cols=60 Identities=18% Similarity=0.156 Sum_probs=49.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+..+...+.++.. +.++.++.+|+++++++..+++.+.+.+
T Consensus 23 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 23 FAEALAEAGATVAFNDGLAAEARELAAALEAA-GGRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47889999999998888877777776776655 5678889999999999999999887653
No 73
>KOG1208|consensus
Probab=98.56 E-value=5.3e-07 Score=53.43 Aligned_cols=61 Identities=20% Similarity=0.102 Sum_probs=51.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+..|++|++..|+.++.++..+.+.... ...+.+..+|+++.++|..+.+......
T Consensus 51 ta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 51 TARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred HHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 588999999999999999888888888887531 2467789999999999999999987543
No 74
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.56 E-value=7.7e-07 Score=50.03 Aligned_cols=60 Identities=20% Similarity=0.321 Sum_probs=48.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++|+.+......+.+... +.++.++.+|++++++++++++.+...+
T Consensus 22 l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 22 IAVRLAADGAEVIVVDICGDDAAATAELVEAA-GGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 46789999999999988876666666666655 5568889999999999999999887654
No 75
>PLN00015 protochlorophyllide reductase
Probab=98.55 E-value=4.6e-07 Score=53.04 Aligned_cols=60 Identities=18% Similarity=0.019 Sum_probs=47.9
Q ss_pred CHHHHHHcC-CeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQG-CKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++| ++|++.+|+.+..+++...+... +.++.++.+|+++.++++.+++.+.+.+
T Consensus 13 ia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 73 (308)
T PLN00015 13 TAKALAETGKWHVVMACRDFLKAERAAKSAGMP-KDSYTVMHLDLASLDSVRQFVDNFRRSG 73 (308)
T ss_pred HHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 478899999 99999888877666666666433 4467788999999999999999887543
No 76
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.55 E-value=5.8e-07 Score=51.23 Aligned_cols=57 Identities=14% Similarity=0.060 Sum_probs=45.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+.++.+.+.+ +.++.++.+|++++++++.+++++.+.+
T Consensus 22 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 22 LVERFLAEGARVAVLERSAEKLASLRQRF----GDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 47899999999999998866655544433 4457788999999999999999987764
No 77
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.55 E-value=8.5e-07 Score=50.37 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=46.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++. ...+..+.+... +.++.++.+|+++++++.++++++.+.+
T Consensus 24 la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 24 VALRAAAEGARVVLVDRSE-LVHEVAAELRAA-GGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred HHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc-CCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 4788999999999988864 344555555554 5677889999999999999999987754
No 78
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.55 E-value=8.9e-07 Score=50.44 Aligned_cols=61 Identities=21% Similarity=0.290 Sum_probs=48.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCC-CceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAP-GAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..+...+.++..++ .++..+.+|++++++++.+++.+.+.+
T Consensus 34 ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 34 TARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4788999999999988887777776666654224 367789999999999999999887664
No 79
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.54 E-value=9.5e-07 Score=49.80 Aligned_cols=60 Identities=23% Similarity=0.259 Sum_probs=48.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++|+.+..+.+.+.+... +.....+.+|+++.+++..+++.+.+.+
T Consensus 22 la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 22 YAEALAREGASVVVADINAEGAERVAKQIVAD-GGTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 47889999999999998866666666666554 4567788999999999999999887665
No 80
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.54 E-value=5.9e-07 Score=52.76 Aligned_cols=60 Identities=18% Similarity=0.030 Sum_probs=48.3
Q ss_pred CHHHHHHcC-CeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQG-CKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++| ++|++++|+.++.+++.+.+... +..+.++.+|+++.++++.+++.+.+.+
T Consensus 19 ia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 19 AAKALAATGEWHVIMACRDFLKAEQAAKSLGMP-KDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred HHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 478899999 99999988877777666666433 4567788999999999999999987653
No 81
>PLN02253 xanthoxin dehydrogenase
Probab=98.54 E-value=7.1e-07 Score=51.26 Aligned_cols=59 Identities=22% Similarity=0.353 Sum_probs=46.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+..++..+.+. . +.++.++.+|++++++++++++.+.+.+
T Consensus 34 la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 34 IVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-G-EPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-C-CCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 478899999999999887665555555542 2 3467889999999999999999987765
No 82
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.54 E-value=7.7e-07 Score=50.17 Aligned_cols=60 Identities=20% Similarity=0.276 Sum_probs=48.1
Q ss_pred CHHHHHHcCCeEEE-eecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVAC-AEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++ ..|+.+..+++.+++... +.++.++.+|++++++++.+++++.+.+
T Consensus 20 ~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 20 IALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GRKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47899999999876 467666666666777655 6678889999999999999999887654
No 83
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.54 E-value=7.7e-07 Score=50.49 Aligned_cols=59 Identities=12% Similarity=0.063 Sum_probs=47.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+.. +..+.+... +.++.++.+|++++++++.+++++.+.+
T Consensus 23 la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 23 ISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL-QPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred HHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 4789999999999888876655 555666555 6678889999999999999999887654
No 84
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.53 E-value=6.3e-07 Score=52.17 Aligned_cols=59 Identities=10% Similarity=0.142 Sum_probs=47.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.++++++.+.+.. +..+..+.+|+++.++++++++++.+.+
T Consensus 25 ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 25 LARRLHARGAKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4788999999999999987777666665532 3456677899999999999999987764
No 85
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.53 E-value=9.4e-07 Score=49.74 Aligned_cols=60 Identities=22% Similarity=0.325 Sum_probs=49.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++.++.+...+++... +.++.++.+|+++++++.++++.+.+.+
T Consensus 21 ~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 21 MAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-GTEVRGYAANVTDEEDVEATFAQIAEDF 80 (253)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46789999999999998877777777777665 6678889999999999999999887643
No 86
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.53 E-value=8.6e-07 Score=50.18 Aligned_cols=60 Identities=22% Similarity=0.171 Sum_probs=48.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+.++.+...+... +.++.++.+|+++++++.++++.+.+.+
T Consensus 25 ~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 25 FAQVLAQAGAKVVLASRRVERLKELRAEIEAE-GGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 47889999999999998877777777766554 5567889999999999999998876543
No 87
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.52 E-value=1.1e-06 Score=49.30 Aligned_cols=60 Identities=17% Similarity=0.173 Sum_probs=47.3
Q ss_pred CHHHHHHcCCeEEEeecC-cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQ-KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|+++++. .+..+.....++.. +.++.++.+|+++++++..+++.+.+.+
T Consensus 14 ~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 74 (239)
T TIGR01831 14 IANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-GGNARLLQFDVADRVACRTLLEADIAEH 74 (239)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 478899999999887654 44556666666655 6678899999999999999998877654
No 88
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.51 E-value=1.1e-06 Score=49.52 Aligned_cols=60 Identities=25% Similarity=0.458 Sum_probs=49.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|++.|++|++++++.+...++...+... +.++.++.+|+++.++++.+++.+.+.+
T Consensus 19 la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 19 TCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-GGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred HHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999888877767666666655 5678889999999999999999887653
No 89
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.51 E-value=6.8e-07 Score=51.04 Aligned_cols=57 Identities=19% Similarity=0.164 Sum_probs=42.5
Q ss_pred CHHHHHHcCCeEEEeecCc--chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQK--DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++++. +..+++.+.+ +..+.++.+|++++++++++++.+.+++
T Consensus 25 ~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 25 VARVAQEQGAEVVLTGFGRALRLTERIAKRL----PEPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred HHHHHHHCCCEEEEecCccchhHHHHHHHhc----CCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4788999999999988754 2223333322 3356788999999999999999988764
No 90
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.51 E-value=1.2e-06 Score=49.33 Aligned_cols=61 Identities=23% Similarity=0.046 Sum_probs=48.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++.+++.++.+++...+.... +.++.++.+|+++++++.++++++...+
T Consensus 18 la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 18 MAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478899999999999988777777666665431 3467889999999999999999887664
No 91
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.50 E-value=4.1e-07 Score=51.35 Aligned_cols=56 Identities=18% Similarity=0.121 Sum_probs=47.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|++|.+.|-.||+++|+++++++..+.. .......||+.|.++..++++.+.+++
T Consensus 21 lak~f~elgN~VIi~gR~e~~L~e~~~~~-----p~~~t~v~Dv~d~~~~~~lvewLkk~~ 76 (245)
T COG3967 21 LAKRFLELGNTVIICGRNEERLAEAKAEN-----PEIHTEVCDVADRDSRRELVEWLKKEY 76 (245)
T ss_pred HHHHHHHhCCEEEEecCcHHHHHHHHhcC-----cchheeeecccchhhHHHHHHHHHhhC
Confidence 37899999999999999988877766553 456788999999999999999998876
No 92
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.50 E-value=1.2e-06 Score=49.85 Aligned_cols=60 Identities=18% Similarity=0.209 Sum_probs=49.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++....+...+.+... +.++.++.+|+++++++..+++.+.+++
T Consensus 17 la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 76 (263)
T PRK06181 17 LAVRLARAGAQLVLAARNETRLASLAQELADH-GGEALVVPTDVSDAEACERLIEAAVARF 76 (263)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46788999999999998877666666666655 6678889999999999999999887654
No 93
>PRK09242 tropinone reductase; Provisional
Probab=98.50 E-value=1.3e-06 Score=49.62 Aligned_cols=61 Identities=15% Similarity=0.102 Sum_probs=48.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..++..+.+...+ +.++.++.+|+++++++..+++.+.+.+
T Consensus 25 ~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 25 IAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 478899999999999888777776666665431 3467788999999999999999987764
No 94
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.50 E-value=1.2e-06 Score=49.83 Aligned_cols=59 Identities=22% Similarity=0.186 Sum_probs=45.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++++++.. ..+....+... +.++.++.+|++++++++.+++.+.+++
T Consensus 22 la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 22 IARVFARHGANLILLDISPE-IEKLADELCGR-GHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred HHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999888754 34444445444 5567789999999999999999987764
No 95
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.50 E-value=9.1e-07 Score=51.95 Aligned_cols=58 Identities=22% Similarity=0.141 Sum_probs=47.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+++.|++.|++|++++|+.+..+...+++... +.++.++.+|+++.+++..+++.+.+
T Consensus 22 ~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (322)
T PRK07453 22 AAKALAKRGWHVIMACRNLKKAEAAAQELGIP-PDSYTIIHIDLGDLDSVRRFVDDFRA 79 (322)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 47889999999999998877777766666433 45678889999999999999988654
No 96
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.50 E-value=9e-07 Score=56.02 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=51.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+.++++.+.+... +.++.++.+|+++.++++++++.+.+.+
T Consensus 387 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 387 TAIKVAEAGATVFLVARNGEALDELVAEIRAK-GGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 47889999999999999887777777777665 6678889999999999999999887764
No 97
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.50 E-value=1.2e-06 Score=51.25 Aligned_cols=58 Identities=16% Similarity=0.170 Sum_probs=47.1
Q ss_pred CHHHHHHcCCeEEEeecCc-chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQK-DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+|+.|+++|++|++.++.. ...+...+++... +.++.++.+|+++++++.++++.+.+
T Consensus 28 ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dv~d~~~~~~~~~~~~~ 86 (306)
T PRK07792 28 EALGLARLGATVVVNDVASALDASDVLDEIRAA-GAKAVAVAGDISQRATADELVATAVG 86 (306)
T ss_pred HHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4789999999999887643 3456666777665 66788899999999999999998876
No 98
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.49 E-value=1.2e-06 Score=49.75 Aligned_cols=60 Identities=13% Similarity=0.154 Sum_probs=48.0
Q ss_pred CHHHHHHcCCe-EEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCK-VACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++ |++++++.+........+... +..+.++.+|+++++++.++++.+..++
T Consensus 22 la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 22 IARAFAERGAAGLVICGRNAEKGEAQAAELEAL-GAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred HHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46889999999 888888766666666666555 6677788999999999999999887654
No 99
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.49 E-value=9.1e-07 Score=51.03 Aligned_cols=55 Identities=18% Similarity=0.134 Sum_probs=45.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+|+.|+ +|++|++++++.+.+++..+++... +.++.++.+|+++++++..+++.+
T Consensus 17 la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~i~~~~~~~ 71 (275)
T PRK06940 17 IARRVG-AGKKVLLADYNEENLEAAAKTLREA-GFDVSTQEVDVSSRESVKALAATA 71 (275)
T ss_pred HHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEeecCCHHHHHHHHHHH
Confidence 467886 8999999998877677666666654 567888999999999999999886
No 100
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.49 E-value=1.6e-06 Score=48.50 Aligned_cols=59 Identities=22% Similarity=0.266 Sum_probs=48.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|+++|++|++++|+..........+... +.+..++.+|+++++++..+++.+...
T Consensus 21 l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 21 IALRLAADGAKVVIYDSNEEAAEALAAELRAA-GGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred HHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 47889999999998998877767666666655 667888899999999999999887654
No 101
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.49 E-value=1.2e-06 Score=49.79 Aligned_cols=57 Identities=21% Similarity=0.244 Sum_probs=45.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++++.+..+.+.+.+ +.++.++.+|++++++++.+++.+.+.+
T Consensus 22 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 22 VAERYLAEGARVVIADIKPARARLAALEI----GPAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47899999999999988876655554443 3457788999999999999999987654
No 102
>PRK06128 oxidoreductase; Provisional
Probab=98.49 E-value=1.7e-06 Score=50.47 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=46.7
Q ss_pred CHHHHHHcCCeEEEeecCcc--hHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKD--LNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++.+ ..++..+.++.. +.++.++.+|+++.++++++++++.+.+
T Consensus 71 ~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 71 TAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred HHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 47899999999988765432 345555666655 6678889999999999999999987754
No 103
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.49 E-value=1.3e-06 Score=49.79 Aligned_cols=60 Identities=10% Similarity=0.035 Sum_probs=44.8
Q ss_pred CHHHHHHcCCeEEEeecC-----------cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQ-----------KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|++|+++|++|++++++ .+...+..+.++.. +.++.++.+|+++.+++.++++.+.+.+
T Consensus 24 ~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~~~~~~i~~~~~~~~~~~ 94 (256)
T PRK12859 24 ICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-GVKVSSMELDLTQNDAPKELLNKVTEQL 94 (256)
T ss_pred HHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999999999886432 12223444555555 6678889999999999999999988764
No 104
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.48 E-value=1.5e-06 Score=49.53 Aligned_cols=60 Identities=18% Similarity=0.205 Sum_probs=47.1
Q ss_pred CHHHHHHcCCeEEEeecC-cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQ-KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++..++ .+........+... +.++.++.+|+++.+++.++++.+.+.+
T Consensus 23 ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 23 MAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-GGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 478999999999887664 34455566666655 6677889999999999999999887764
No 105
>PRK05717 oxidoreductase; Validated
Probab=98.48 E-value=1.2e-06 Score=49.69 Aligned_cols=57 Identities=14% Similarity=0.152 Sum_probs=44.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++++.+...+..+. . +..+.++.+|+++.++++.+++++.+++
T Consensus 26 ~a~~l~~~g~~v~~~~~~~~~~~~~~~~---~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 26 IAAWLIAEGWQVVLADLDRERGSKVAKA---L-GENAWFIAMDVADEAQVAAGVAEVLGQF 82 (255)
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHH---c-CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999999999988876554443333 2 4567789999999999999999887764
No 106
>KOG1014|consensus
Probab=98.48 E-value=8.7e-07 Score=52.25 Aligned_cols=58 Identities=16% Similarity=0.098 Sum_probs=48.2
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
|+.||++|.+|++.+|+.++++.+.+++++.++..+....+|.++.+.+-+-+.+..+
T Consensus 66 A~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~ 123 (312)
T KOG1014|consen 66 ARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLA 123 (312)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhc
Confidence 7889999999999999999999999999877577888899999998875444444443
No 107
>PRK06484 short chain dehydrogenase; Validated
Probab=98.48 E-value=1e-06 Score=54.48 Aligned_cols=57 Identities=18% Similarity=0.182 Sum_probs=46.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+.+++....+ +.++.++.+|++++++++++++.+.+.+
T Consensus 21 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (520)
T PRK06484 21 ACQRFARAGDQVVVADRNVERARERADSL----GPDHHALAMDVSDEAQIREGFEQLHREF 77 (520)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence 47899999999999988766655544443 4567789999999999999999988765
No 108
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.47 E-value=1.3e-06 Score=50.08 Aligned_cols=59 Identities=14% Similarity=0.189 Sum_probs=40.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|++|+++|++|++.++.... .+..+.+....+. ...+.+|++++++++.+++.+.+++
T Consensus 24 ~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 24 IAKACKREGAELAFTYVGDRF-KDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQHW 82 (260)
T ss_pred HHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHHHh
Confidence 478999999999887653221 2222223222132 3468999999999999999998775
No 109
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.47 E-value=1.5e-06 Score=49.93 Aligned_cols=60 Identities=27% Similarity=0.264 Sum_probs=47.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++.+..++....+... +.++.++.+|+++++++..+++.+...+
T Consensus 26 la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 26 TAIELAAAGFPVALGARRVEKCEELVDKIRAD-GGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 47889999999988888766666665555554 5567788999999999999999876643
No 110
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.47 E-value=1.2e-06 Score=49.99 Aligned_cols=57 Identities=18% Similarity=0.131 Sum_probs=44.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..+++... . +.++.++.+|+++.+++.++++++.+++
T Consensus 21 ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (262)
T TIGR03325 21 IVDRFVAEGARVAVLDKSAAGLQELEAA---H-GDAVVGVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHhh---c-CCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence 4789999999999998876555443322 2 4567788999999999999999987765
No 111
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.47 E-value=1.6e-06 Score=49.49 Aligned_cols=58 Identities=16% Similarity=0.202 Sum_probs=46.6
Q ss_pred CHHHHHHcC-CeEEEeecCcch-HHHHHHHHHhhCC-CceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 1 MALEFARQG-CKVACAEIQKDL-NEETVQMVNQVAP-GAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 1 ia~~la~~G-~~V~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+|++|+++| ++|++++|+.+. .+++.+++... + .++.++.+|+++++++.++++.+.+
T Consensus 24 la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 24 ICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA-GASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred HHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc-CCCceEEEEecCCChHHHHHHHHHHHh
Confidence 478888885 899999888765 67777777665 4 3688899999999999999888764
No 112
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.47 E-value=1.7e-06 Score=48.81 Aligned_cols=59 Identities=19% Similarity=0.239 Sum_probs=48.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|+++|++|++++|+.+..+.+...+... +.++..+.+|+++++++..+++.+.+.
T Consensus 17 l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (255)
T TIGR01963 17 IALALAAAGANVVVNDLGEAGAEAAAKVATDA-GGSVIYLVADVTKEDEIADMIAAAAAE 75 (255)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 46889999999999998877666666666554 557888999999999999999888765
No 113
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.46 E-value=1.4e-06 Score=49.62 Aligned_cols=56 Identities=14% Similarity=0.095 Sum_probs=45.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|++.|++|++++++.+..+...+.+....+.++.++.+|+++++++..+++.
T Consensus 23 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (259)
T PRK06125 23 AAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE 78 (259)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH
Confidence 47889999999999998877777776666543245678899999999999998765
No 114
>PRK07985 oxidoreductase; Provisional
Probab=98.46 E-value=1.9e-06 Score=50.25 Aligned_cols=60 Identities=13% Similarity=0.185 Sum_probs=46.1
Q ss_pred CHHHHHHcCCeEEEeecCc--chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQK--DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++. +..+++.+.+... +.++.++.+|+++++++..+++++.+.+
T Consensus 65 ia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 65 AAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC-GRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred HHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc-CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999999998876543 3345555555554 5677789999999999999999988764
No 115
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.46 E-value=1.8e-06 Score=49.09 Aligned_cols=60 Identities=5% Similarity=-0.067 Sum_probs=45.0
Q ss_pred CHHHHHHcCCeEEEeecC-----------cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQ-----------KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++ ......+...+... +.++.++.+|+++++++..+++.+.+.+
T Consensus 23 la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 93 (256)
T PRK12748 23 VCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY-GVRCEHMEIDLSQPYAPNRVFYAVSERL 93 (256)
T ss_pred HHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 478999999999988776 22222244444444 5678889999999999999999988764
No 116
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.46 E-value=1.7e-06 Score=50.41 Aligned_cols=61 Identities=15% Similarity=0.048 Sum_probs=47.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|++.|++|++++|+.+...+..+.+.... +..+.++.+|+++.++++++++++.+.+
T Consensus 32 ~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 32 TAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 478899999999998888766666555554321 2467788999999999999999887654
No 117
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.45 E-value=1.6e-06 Score=49.37 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=46.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+++.|+++|++|++++++.+.......++ .. +.++.++.+|+++++++..+++.+.+
T Consensus 21 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~-~~~~~~~~~D~~d~~~~~~~~~~~~~ 77 (263)
T PRK09072 21 LAEALAAAGARLLLVGRNAEKLEALAARL-PY-PGRHRWVVADLTSEAGREAVLARARE 77 (263)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHH-hc-CCceEEEEccCCCHHHHHHHHHHHHh
Confidence 47889999999999998877766666666 33 55788899999999999999988754
No 118
>PRK06484 short chain dehydrogenase; Validated
Probab=98.45 E-value=1.4e-06 Score=53.95 Aligned_cols=57 Identities=11% Similarity=0.092 Sum_probs=46.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++++.+.++++.+.+ +.++..+.+|++++++++++++.+.+++
T Consensus 285 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 285 VADRFAAAGDRLLIIDRDAEGAKKLAEAL----GDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 47899999999999998866665554433 4556778999999999999999988765
No 119
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.45 E-value=2.2e-06 Score=48.28 Aligned_cols=59 Identities=19% Similarity=0.321 Sum_probs=47.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++|+.+..+.+...+.. +..+.++.+|++++++++.+++++.+.+
T Consensus 21 l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 21 IARRFAAEGARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4788999999999999987766665555533 3467889999999999999999886654
No 120
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.45 E-value=1.8e-06 Score=49.49 Aligned_cols=60 Identities=20% Similarity=0.150 Sum_probs=47.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCc-eeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGA-AKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+..++...++... +.. ..++.+|+++++++.++++++.+.+
T Consensus 16 la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (272)
T PRK07832 16 TALRLAAQGAELFLTDRDADGLAQTVADARAL-GGTVPEHRALDISDYDAVAAFAADIHAAH 76 (272)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCcceEEEeeCCCHHHHHHHHHHHHHhc
Confidence 47889999999999888877666666666554 433 4557899999999999999887654
No 121
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.44 E-value=2.2e-06 Score=48.31 Aligned_cols=60 Identities=25% Similarity=0.220 Sum_probs=45.4
Q ss_pred CHHHHHHcCCeEEEeec-CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEI-QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++.++ +.+........+... +..+.++.+|+++.+++.++++.+.+.+
T Consensus 18 ~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06123 18 TALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-GGEALAVAADVADEADVLRLFEAVDREL 78 (248)
T ss_pred HHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-CCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence 47889999999887654 334445555556544 5567789999999999999999887754
No 122
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.42 E-value=7.8e-07 Score=48.74 Aligned_cols=60 Identities=13% Similarity=0.186 Sum_probs=44.9
Q ss_pred CHHHHHHcCC-eEEEeecC---cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGC-KVACAEIQ---KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~-~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|+ ++++++|+ ..........++.. +.++.++.+|++|++++.++++.+.+++
T Consensus 16 la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-g~~v~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (181)
T PF08659_consen 16 LARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-GARVEYVQCDVTDPEAVAAALAQLRQRF 79 (181)
T ss_dssp HHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred HHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence 3688999986 47788776 23455677888877 8899999999999999999999887665
No 123
>PRK09186 flagellin modification protein A; Provisional
Probab=98.42 E-value=2.5e-06 Score=48.25 Aligned_cols=61 Identities=15% Similarity=0.128 Sum_probs=47.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCC-CceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAP-GAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++++.+..++....+...++ ..+.++.+|+++++++..+++.+.+.+
T Consensus 20 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 20 LVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred HHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4788999999999998887777777666643212 235566999999999999999887643
No 124
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.42 E-value=3.5e-06 Score=47.05 Aligned_cols=60 Identities=25% Similarity=0.312 Sum_probs=46.3
Q ss_pred CHHHHHHcCCeEEEeecCc-chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQK-DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++. +........+... +.++.++.+|++++++++++++.+.+.+
T Consensus 14 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (239)
T TIGR01830 14 IALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-GVKALGVVCDVSDREDVKAVVEEIEEEL 74 (239)
T ss_pred HHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4788999999998887754 4445555566555 6678889999999999999998886653
No 125
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.41 E-value=2.9e-06 Score=47.87 Aligned_cols=60 Identities=23% Similarity=0.100 Sum_probs=46.6
Q ss_pred CHHHHHHcCCeEEEe-ecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACA-EIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|+++ .++.+..+.....+... +.++.++.+|+++.++++++++++.+.+
T Consensus 18 la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 18 TAVLAAARGWSVGINYARDAAAAEETADAVRAA-GGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 478899999999775 45555556666666554 5678899999999999999999887654
No 126
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.40 E-value=2.5e-06 Score=48.34 Aligned_cols=57 Identities=16% Similarity=0.075 Sum_probs=44.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+.++.+...+ +.++.++.+|+++.++++.+++.+.+.+
T Consensus 16 la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 72 (248)
T PRK10538 16 ITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRAAIEEMLASLPAEW 72 (248)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHh----ccceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 47889999999999988766555544332 4467788999999999999999887654
No 127
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.40 E-value=3.9e-06 Score=47.52 Aligned_cols=59 Identities=22% Similarity=0.166 Sum_probs=45.8
Q ss_pred CHHHHHHcCCeEEEee-cCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAE-IQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|++.|++|++.. ++.+...+...++... +..+..+.+|+++.+++..+++.+.+.
T Consensus 20 ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 20 IAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred HHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc-CCceEEEecccCCHHHHHHHHHHHHHH
Confidence 4789999999998864 4455556666666655 566778899999999999999988764
No 128
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.40 E-value=3.4e-06 Score=47.70 Aligned_cols=60 Identities=13% Similarity=0.095 Sum_probs=46.2
Q ss_pred CHHHHHHcCCeEEEeecCc-chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQK-DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++. +......+.++.. +.++.++.+|+++++++.++++.+.+.+
T Consensus 18 la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12745 18 IARALAAAGFDLAINDRPDDEELAATQQELRAL-GVEVIFFPADVADLSAHEAMLDAAQAAW 78 (256)
T ss_pred HHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4788999999999887653 3444555555544 5578889999999999999999887654
No 129
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.40 E-value=3.3e-06 Score=47.96 Aligned_cols=58 Identities=21% Similarity=0.339 Sum_probs=44.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++.+++.. .+..+.+... +.++..+.+|+++.++++++++++.+++
T Consensus 26 ~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 26 MALGLAEAGCDIVGINIVEP--TETIEQVTAL-GRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred HHHHHHHCCCEEEEecCcch--HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 47899999999988766432 3344455544 5567889999999999999999987765
No 130
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.40 E-value=3.6e-06 Score=48.96 Aligned_cols=60 Identities=20% Similarity=0.170 Sum_probs=46.5
Q ss_pred CHHHHHHcCCeEEEeecCcc-hHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKD-LNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|++.|++|++++++.. ........++.. +.++.++.+|+++.+++.++++++.+.+
T Consensus 62 la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 62 VAVLFAKEGADIAIVYLDEHEDANETKQRVEKE-GVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred HHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47899999999998887643 344555555544 5677889999999999999999987754
No 131
>PRK07069 short chain dehydrogenase; Validated
Probab=98.40 E-value=3.6e-06 Score=47.45 Aligned_cols=61 Identities=18% Similarity=0.106 Sum_probs=45.8
Q ss_pred CHHHHHHcCCeEEEeecC-cchHHHHHHHHHhhCCC-ceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQ-KDLNEETVQMVNQVAPG-AAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++ .+.++.+.+.+....+. ....+.+|++++++++++++.+.+.+
T Consensus 15 ~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 15 IARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM 77 (251)
T ss_pred HHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 478899999999998887 55556666555443122 34568899999999999999987754
No 132
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.39 E-value=3e-06 Score=47.57 Aligned_cols=60 Identities=22% Similarity=0.184 Sum_probs=46.6
Q ss_pred CHHHHHHcCCeEEE-eecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVAC-AEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++ ..++.+...+....+... +.++..+.+|++++++++++++.+.+.+
T Consensus 17 l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 77 (247)
T PRK09730 17 TALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-GGKAFVLQADISDENQVVAMFTAIDQHD 77 (247)
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-CCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 46889999999976 456655566666666655 5677889999999999999999887653
No 133
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.38 E-value=3.9e-06 Score=47.27 Aligned_cols=60 Identities=12% Similarity=0.049 Sum_probs=45.4
Q ss_pred CHHHHHHcCCeEEEe-ecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACA-EIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++. +++.....+..+.+... +.++..+.+|+++.+++.++++++.+.+
T Consensus 19 ~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 19 ICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-GFDFIASEGNVGDWDSTKAAFDKVKAEV 79 (246)
T ss_pred HHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 478999999998874 44444445555555554 5677788999999999999999887654
No 134
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.38 E-value=4e-06 Score=47.44 Aligned_cols=60 Identities=22% Similarity=0.256 Sum_probs=46.0
Q ss_pred CHHHHHHcCCeEEEe-ecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACA-EIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++. .++.+......+.+... +..+.++.+|+++++++.++++++.+++
T Consensus 22 la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 22 IAMRLANDGALVAIHYGRNKQAADETIREIESN-GGKAFLIEADLNSIDGVKKLVEQLKNEL 82 (254)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence 478899999999774 56655555555555543 4567789999999999999999887664
No 135
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.37 E-value=3.9e-06 Score=46.11 Aligned_cols=60 Identities=17% Similarity=0.131 Sum_probs=46.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKIL 62 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 62 (69)
+++.|+++|++|++.+++.+....+...+.. +.++.++.+|++|++++..+++.+.++++
T Consensus 15 la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g 74 (177)
T PRK08309 15 VSLWLCEKGFHVSVIARREVKLENVKRESTT--PESITPLPLDYHDDDALKLAIKSTIEKNG 74 (177)
T ss_pred HHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4688999999998888876655555443432 34677889999999999999999877653
No 136
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.37 E-value=4.3e-06 Score=46.90 Aligned_cols=60 Identities=23% Similarity=0.325 Sum_probs=47.7
Q ss_pred CHHHHHHcCCeEEEe-ecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACA-EIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|+++ +++.+........+... +.++.++.+|++++++++++++.+.+.+
T Consensus 21 la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 21 IAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-GGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 467899999999887 88766666666666554 5568889999999999999998877653
No 137
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.37 E-value=4.3e-06 Score=47.14 Aligned_cols=58 Identities=16% Similarity=0.246 Sum_probs=45.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++. ..+..+.+... +..+.++.+|+++++++..+++.+.+.+
T Consensus 21 ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 21 IAVGLAEAGADIVGAGRSE--PSETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred HHHHHHHCCCEEEEEcCch--HHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999988754 23444455444 5567889999999999999999887654
No 138
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.37 E-value=4.4e-06 Score=46.79 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=45.1
Q ss_pred CHHHHHHcCCeEEEeec-CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEI-QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|+++.+ +.+...++...+... +.++.++.+|+++++++..+++.+.+.+
T Consensus 16 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (242)
T TIGR01829 16 ICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-GFDFRVVEGDVSSFESCKAAVAKVEAEL 76 (242)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 47889999999988766 444445554554444 5578889999999999999998887653
No 139
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.36 E-value=4.1e-06 Score=48.02 Aligned_cols=61 Identities=16% Similarity=0.124 Sum_probs=46.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+......+.+.... +.++.++.+|+++++++..+++++.+++
T Consensus 23 la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 23 VAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478899999999999887666666555554331 2467788999999999999999887653
No 140
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.36 E-value=5e-06 Score=46.88 Aligned_cols=60 Identities=20% Similarity=0.168 Sum_probs=45.7
Q ss_pred CHHHHHHcCCeEEEeecCcc-hHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKD-LNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+|+.+ ..+.....+... +.++.++.+|+++++++..+++.+.+.+
T Consensus 22 l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 22 TAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-GGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred HHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 46789999999988777643 345555556554 5567889999999999999999876553
No 141
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.35 E-value=4.4e-06 Score=47.04 Aligned_cols=57 Identities=18% Similarity=0.093 Sum_probs=44.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+...+..+.+ +.++.++.+|+++.+++..+++.+.+.+
T Consensus 22 la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 22 TARQFLAEGARVAITGRDPASLEAARAEL----GESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred HHHHHHHCCCEEEEecCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 47889999999999888765444433332 5567788999999999999998887654
No 142
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.35 E-value=5.8e-06 Score=46.43 Aligned_cols=60 Identities=20% Similarity=0.181 Sum_probs=46.4
Q ss_pred CHHHHHHcCCeEEEeecCc-chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQK-DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|+++.++. .......+.+... +.++.++.+|+++.++++++++.+.+.+
T Consensus 21 la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 21 IARRLAADGFAVAVNYAGSAAAADELVAEIEAA-GGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred HHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4788999999998765543 3345555666555 6678889999999999999999987764
No 143
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.35 E-value=4.5e-06 Score=47.04 Aligned_cols=60 Identities=17% Similarity=0.224 Sum_probs=46.5
Q ss_pred CHHHHHHcCCeEEEee-cCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAE-IQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|++.|++|++.. ++.+..++..+.+... +.++.++.+|+++++++.++++++.+.+
T Consensus 22 la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 22 ITVALAQEGAKVVINYNSSKEAAENLVNELGKE-GHDVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred HHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4788999999998754 4444555565666555 5678889999999999999999987764
No 144
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.34 E-value=5.1e-06 Score=47.54 Aligned_cols=59 Identities=15% Similarity=0.145 Sum_probs=40.7
Q ss_pred CHHHHHHcCCeEEEeec-CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEI-QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+++.|+++|++|+++++ +.+....+.+.+....+.+..++.+|+++++++...++++.+
T Consensus 17 ~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~ 76 (267)
T TIGR02685 17 IAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIID 76 (267)
T ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHH
Confidence 47899999999988654 445566666666432245677789999999877555444443
No 145
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.33 E-value=5.1e-06 Score=47.70 Aligned_cols=60 Identities=22% Similarity=0.258 Sum_probs=45.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..+...+.+.... +.++.++.+|++++++++. ++++.+.+
T Consensus 19 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 19 TTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred HHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 468899999999998888776666655554331 2467888999999999999 88876653
No 146
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.31 E-value=4.5e-06 Score=46.60 Aligned_cols=55 Identities=18% Similarity=0.209 Sum_probs=43.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+++.|+++|++|++++|+.++.......++ . +..+.++.+|+++++++..+++.+
T Consensus 13 ~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~~~~~~~ 67 (230)
T PRK07041 13 LARAFAAEGARVTIASRSRDRLAAAARALG-G-GAPVRTAALDITDEAAVDAFFAEA 67 (230)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-c-CCceEEEEccCCCHHHHHHHHHhc
Confidence 478899999999999888666666555554 2 456778899999999999988763
No 147
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.30 E-value=2.9e-06 Score=47.88 Aligned_cols=53 Identities=17% Similarity=0.172 Sum_probs=40.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDF 58 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 58 (69)
+++.|+++|++|++++|+.+.++++. .. +.++.++.+|++++++++++++.+.
T Consensus 17 la~~L~~~G~~V~~~~r~~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 69 (240)
T PRK06101 17 LALDYAKQGWQVIACGRNQSVLDELH----TQ-SANIFTLAFDVTDHPGTKAALSQLP 69 (240)
T ss_pred HHHHHHhCCCEEEEEECCHHHHHHHH----Hh-cCCCeEEEeeCCCHHHHHHHHHhcc
Confidence 47889999999999998765544432 22 3457788999999999999988753
No 148
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.30 E-value=7.6e-06 Score=46.53 Aligned_cols=60 Identities=23% Similarity=0.241 Sum_probs=43.8
Q ss_pred CHHHHHHcCCeEEEeecC----cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQ----KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|++.|++|++..++ .+..+...+.+... +.++.++.+|++++++++++++.+.+.+
T Consensus 24 ~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 87 (257)
T PRK12744 24 IARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-GAKAVAFQADLTTAAAVEKLFDDAKAAF 87 (257)
T ss_pred HHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-CCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence 478999999996655432 23344455555544 5577889999999999999999887654
No 149
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.30 E-value=7.7e-06 Score=46.52 Aligned_cols=60 Identities=18% Similarity=0.201 Sum_probs=45.6
Q ss_pred CHHHHHHcCCeEEEeec-CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEI-QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++..+ +.+..+.+...+... +.++.++.+|+++.+++.++++.+...+
T Consensus 25 la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 25 IALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-GRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47889999999987654 444455566666554 5667889999999999999999887653
No 150
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.27 E-value=7.6e-06 Score=46.55 Aligned_cols=57 Identities=21% Similarity=0.120 Sum_probs=45.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|+++|++|++++++.+..+++...+. +.++.++.+|+++.+++.++++.+..+
T Consensus 17 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~ 73 (260)
T PRK08267 17 TALLFAAEGWRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAAA 73 (260)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 478899999999999888766665544432 346788899999999999999887654
No 151
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.27 E-value=5.5e-06 Score=46.79 Aligned_cols=57 Identities=12% Similarity=0.119 Sum_probs=42.3
Q ss_pred CHHHHHHcCCeEEEeecCcc-hHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKD-LNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.. .... ..... +.++.++.+|+++++++..+++++...+
T Consensus 17 ia~~l~~~g~~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (251)
T PRK06924 17 IANQLLEKGTHVISISRTENKELTK---LAEQY-NSNLTFHSLDLQDVHELETNFNEILSSI 74 (251)
T ss_pred HHHHHHhcCCEEEEEeCCchHHHHH---HHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 57899999999998888652 2222 22222 4567789999999999999999887653
No 152
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.26 E-value=9.2e-06 Score=46.09 Aligned_cols=58 Identities=14% Similarity=0.151 Sum_probs=45.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+..+.+...+. +.++..+.+|+++++++..+++++..++
T Consensus 18 la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (257)
T PRK07074 18 LARRFLAAGDRVLALDIDAAALAAFADALG---DARFVPVACDLTDAASLAAALANAAAER 75 (257)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 478899999999999887766665555542 3467788999999999999998886654
No 153
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.26 E-value=9.6e-06 Score=45.50 Aligned_cols=60 Identities=10% Similarity=0.042 Sum_probs=43.6
Q ss_pred CHHHHHHcCCeEEEeecCcc-hHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKD-LNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|+++|++|++++++.. ...+........ +.++.++.+|+++++++.++++.+.+++
T Consensus 18 la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 18 IARELLNDGYRVIATYFSGNDCAKDWFEEYGFT-EDQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred HHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc-CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47889999999999887643 222232332222 4567889999999999999999887654
No 154
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.25 E-value=7.6e-06 Score=46.89 Aligned_cols=56 Identities=21% Similarity=0.185 Sum_probs=43.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++.+.+++....+ + .+.++.+|+++++++.++++.+.+.+
T Consensus 21 la~~l~~~G~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 21 TARALAALGARVAIGDLDEALAKETAAEL----G-LVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHh----c-cceEEEccCCCHHHHHHHHHHHHHHc
Confidence 47889999999999888766655544433 2 46678999999999999999987753
No 155
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.25 E-value=1.2e-05 Score=45.02 Aligned_cols=58 Identities=14% Similarity=0.110 Sum_probs=45.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|++.|++|++++|+.+..+.....+... ..+.++.+|+++++++.++++.+...
T Consensus 21 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 21 VAYFALKEGAQVCINSRNENKLKRMKKTLSKY--GNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 46889999999999988876666554555433 35778899999999999999887654
No 156
>PRK06196 oxidoreductase; Provisional
Probab=98.25 E-value=6.2e-06 Score=48.37 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=43.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|+++|++|++++|+.+..++....+. .+.++.+|+++.++++++++.+.+.
T Consensus 42 ~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~~~ 96 (315)
T PRK06196 42 TTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFLDS 96 (315)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHHhc
Confidence 478999999999999888666555544432 2667899999999999999988764
No 157
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.23 E-value=9e-06 Score=46.71 Aligned_cols=57 Identities=9% Similarity=-0.010 Sum_probs=43.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++.+.++.+...+ +..+.++.+|+++++++..+++.+.+.+
T Consensus 19 ~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 19 WTEAALERGDRVVATARDTATLADLAEKY----GDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHhc----cCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 46789999999999888766555443322 4457788999999999999999887654
No 158
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.23 E-value=9e-06 Score=46.80 Aligned_cols=57 Identities=16% Similarity=0.147 Sum_probs=43.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++|+.+..+.+... . +.++..+.+|+++++++..+++.+.+.+
T Consensus 20 la~~l~~~G~~V~~~~r~~~~~~~l~~~---~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 20 LAQAALAAGHRVVGTVRSEAARADFEAL---H-PDRALARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred HHHHHHhCcCEEEEEeCCHHHHHHHHhh---c-CCCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence 4788999999999998876554433222 2 4467788999999999999999887654
No 159
>PRK09135 pteridine reductase; Provisional
Probab=98.23 E-value=1.5e-05 Score=44.81 Aligned_cols=61 Identities=16% Similarity=0.194 Sum_probs=44.7
Q ss_pred CHHHHHHcCCeEEEeecCc-chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQK-DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++. +..+.+...+....+..+.++.+|+++.+++..+++.+.+.+
T Consensus 22 l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 22 IARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4788999999999887753 334544444543313457788999999999999999887654
No 160
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.22 E-value=1.3e-05 Score=44.86 Aligned_cols=59 Identities=22% Similarity=0.229 Sum_probs=46.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|++.|++|++++|+.+........+... .++.++.+|+++.+++..+++.+.+.+
T Consensus 22 la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 22 IAEALLAEGYKVAITARDQKELEEAAAELNNK--GNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred HHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46789999999999888876666666665432 457789999999999999999887654
No 161
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.21 E-value=1.4e-05 Score=44.87 Aligned_cols=57 Identities=14% Similarity=0.043 Sum_probs=43.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|+.|++.+++.+..+.....+ +.++.++.+|+++.++++++++++.+.+
T Consensus 22 la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 22 IARLLHAQGAIVGLHGTRVEKLEALAAEL----GERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred HHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47889999999888877665555443332 4467788999999999999999887764
No 162
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.19 E-value=2.1e-05 Score=44.00 Aligned_cols=60 Identities=22% Similarity=0.226 Sum_probs=44.8
Q ss_pred CHHHHHHcCCeEEEeecCcc-hHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKD-LNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++..++.. ......+++... +.++..+.+|+++++++..+++++.+.+
T Consensus 21 l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 21 IAERLAAQGANVVINYASSEAGAEALVAEIGAL-GGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred HHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46789999999977655443 345555555544 5678888999999999999999887653
No 163
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.19 E-value=1.6e-05 Score=44.34 Aligned_cols=58 Identities=17% Similarity=0.009 Sum_probs=44.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++|+.+...+....+... ....+.+|+++.+++..+++.+.+.+
T Consensus 23 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (239)
T PRK12828 23 TAAWLAARGARVALIGRGAAPLSQTLPGVPAD---ALRIGGIDLVDPQAARRAVDEVNRQF 80 (239)
T ss_pred HHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc---CceEEEeecCCHHHHHHHHHHHHHHh
Confidence 46889999999999988766555554554432 35567899999999999999887664
No 164
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.17 E-value=1.4e-05 Score=44.90 Aligned_cols=55 Identities=15% Similarity=0.025 Sum_probs=42.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+.. .+.+... + +.++.+|++++++++.+++.+.+.+
T Consensus 18 ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~-~--~~~~~~D~~~~~~~~~~~~~~~~~~ 72 (236)
T PRK06483 18 LAWHLLAQGQPVIVSYRTHYPA---IDGLRQA-G--AQCIQADFSTNAGIMAFIDELKQHT 72 (236)
T ss_pred HHHHHHHCCCeEEEEeCCchhH---HHHHHHc-C--CEEEEcCCCCHHHHHHHHHHHHhhC
Confidence 4788999999999988875432 2333333 3 5678999999999999999987764
No 165
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.17 E-value=1.5e-05 Score=45.75 Aligned_cols=57 Identities=16% Similarity=0.112 Sum_probs=43.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|++.|++|+++.++.+..+.+... . +.++.++.+|+++.+++..+++.+.+.+
T Consensus 18 la~~L~~~g~~v~~~~r~~~~~~~~~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (276)
T PRK06482 18 MTERLLARGDRVAATVRRPDALDDLKAR---Y-GDRLWVLQLDVTDSAAVRAVVDRAFAAL 74 (276)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHh---c-cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4788999999999988876554443332 2 4467788999999999999998876653
No 166
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.16 E-value=2.1e-05 Score=44.43 Aligned_cols=61 Identities=13% Similarity=0.035 Sum_probs=46.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCC--CHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVG--NVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+..+.+..++....+.++.++.+|++ +++++.++++.+.+.+
T Consensus 28 la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 90 (247)
T PRK08945 28 AALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF 90 (247)
T ss_pred HHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh
Confidence 478899999999999998777667666665541245667777775 7899999998887754
No 167
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.15 E-value=2.1e-05 Score=48.02 Aligned_cols=60 Identities=15% Similarity=-0.006 Sum_probs=43.4
Q ss_pred CHHHHHHcCCeEEEeecCcch------------HHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhh
Q psy12399 1 MALEFARQGCKVACAEIQKDL------------NEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKIL 62 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 62 (69)
||+.| ++|++|+++++..+. .+.+.+.++.. +..+..+.+|++++++++++++.+.++++
T Consensus 59 IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~-G~~a~~i~~DVss~E~v~~lie~I~e~~G 130 (398)
T PRK13656 59 IAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA-GLYAKSINGDAFSDEIKQKVIELIKQDLG 130 (398)
T ss_pred HHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 47788 999998777643221 12234444444 65677899999999999999999998764
No 168
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.14 E-value=1.9e-05 Score=50.85 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=48.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCC-CceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAP-GAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+..+...+.+....+ ..+..+.+|+++++++..+++++...+
T Consensus 430 iA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 430 TARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred HHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4788999999999999887766666666543212 356788999999999999999987764
No 169
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.13 E-value=2.6e-05 Score=43.80 Aligned_cols=60 Identities=17% Similarity=0.279 Sum_probs=44.0
Q ss_pred CHHHHHHcCCeEEEeec----CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEI----QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.++ +.+.......++... +.++.++.+|++++++++++++.+...+
T Consensus 22 la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (249)
T PRK12827 22 IAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-GGKALGLAFDVRDFAATRAALDAGVEEF 85 (249)
T ss_pred HHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 47889999999987554 233344444555444 5678889999999999999998887653
No 170
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.11 E-value=3.4e-05 Score=43.78 Aligned_cols=58 Identities=16% Similarity=0.232 Sum_probs=44.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..+++.+... ..++.++.+|++++++++.+++++.+.+
T Consensus 27 ~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 27 IAEAFAEAGARVHVCDVSEAALAATAARLP---GAKVTATVADVADPAQVERVFDTAVERF 84 (264)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 467899999999998887665555444432 1246788999999999999999887654
No 171
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.09 E-value=3.6e-05 Score=43.57 Aligned_cols=57 Identities=30% Similarity=0.453 Sum_probs=42.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++|+... ......+. +.....+.+|++++++++.+++++.+.+
T Consensus 31 la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 31 IAELFAAKGARVALLDRSEDV-AEVAAQLL---GGNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred HHHHHHHCCCEEEEEeCCHHH-HHHHHHhh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 478899999999998887543 22223322 3456688999999999999999887764
No 172
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.06 E-value=1.4e-05 Score=45.68 Aligned_cols=52 Identities=17% Similarity=0.079 Sum_probs=40.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++.+... . ...+.++.+|++|+++++++++.+.+.+
T Consensus 20 ~a~~l~~~g~~V~~~~r~~~~~~-------~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 71 (270)
T PRK06179 20 TAEKLARAGYRVFGTSRNPARAA-------P--IPGVELLELDVTDDASVQAAVDEVIARA 71 (270)
T ss_pred HHHHHHHCCCEEEEEeCChhhcc-------c--cCCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence 47889999999999888654321 1 2346788999999999999999987654
No 173
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.05 E-value=2.6e-05 Score=44.19 Aligned_cols=52 Identities=17% Similarity=0.085 Sum_probs=41.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+. ... +..+.++.+|++++++++++++.+.+.+
T Consensus 22 la~~l~~~g~~v~~~~r~~~~--------~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 22 IARAFLAAGATVVVCGRRAPE--------TVD-GRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred HHHHHHHCCCEEEEEeCChhh--------hhc-CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 478899999999998886543 112 4567788999999999999999987654
No 174
>PRK06398 aldose dehydrogenase; Validated
Probab=98.05 E-value=2.6e-05 Score=44.56 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=39.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+. ..++.++.+|++++++++++++.+.+++
T Consensus 22 ia~~l~~~G~~Vi~~~r~~~~------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 22 VVNRLKEEGSNVINFDIKEPS------------YNDVDYFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred HHHHHHHCCCeEEEEeCCccc------------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 478999999999998876432 1246688999999999999999987764
No 175
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.03 E-value=5.1e-05 Score=42.81 Aligned_cols=57 Identities=21% Similarity=0.253 Sum_probs=41.0
Q ss_pred CHHHHHHcCCeEEEeec-CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEI-QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++..+ +.+..+.+... . +.++.++.+|+++++++..+++.+.+.+
T Consensus 21 la~~l~~~G~~vv~~~~~~~~~~~~~~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (253)
T PRK08642 21 IARAFAREGARVVVNYHQSEDAAEALADE---L-GDRAIALQADVTDREQVQAMFATATEHF 78 (253)
T ss_pred HHHHHHHCCCeEEEEcCCCHHHHHHHHHH---h-CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 47889999999987644 33333333222 2 4567788999999999999999887654
No 176
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.03 E-value=3.8e-05 Score=43.64 Aligned_cols=55 Identities=18% Similarity=0.178 Sum_probs=41.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++....+...+.+ + ..++.+|++++++++++++.+.+..
T Consensus 23 ~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~--~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 23 TARRLAAEGATVVVGDIDPEAGKAAADEV----G--GLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C--CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 47889999999999888765544433332 2 2467899999999999999886653
No 177
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.02 E-value=5e-05 Score=42.72 Aligned_cols=61 Identities=10% Similarity=0.023 Sum_probs=45.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCC--HHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGN--VDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++|+.+..+...+++....+....++.+|+++ .+++.++++.+.+.+
T Consensus 22 la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 22 VAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred HHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4788999999999999988777777666654313356778899975 567888888777654
No 178
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.01 E-value=4.1e-05 Score=45.35 Aligned_cols=46 Identities=15% Similarity=0.207 Sum_probs=37.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCC-CceeEEEccCCC
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAP-GAAKGYYCDVGN 46 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~ 46 (69)
+|+.|+++|++|++++|+.++++++.++++..++ .++..+.+|+++
T Consensus 69 lA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~ 115 (320)
T PLN02780 69 FAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG 115 (320)
T ss_pred HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC
Confidence 4789999999999999998888888888765422 367778999985
No 179
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.00 E-value=7.1e-05 Score=41.87 Aligned_cols=59 Identities=22% Similarity=0.326 Sum_probs=43.5
Q ss_pred CHHHHHHcCCeEEEeecC-cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQ-KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|+++|++|++..++ ........+.+... +.++.++.+|+++++++.++++.+...
T Consensus 22 l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 22 IALRLARAGADVVVHYRSDEEAAEELVEAVEAL-GRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred HHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 467899999998775443 33344455555544 567888999999999999999887654
No 180
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.00 E-value=7e-05 Score=42.23 Aligned_cols=60 Identities=20% Similarity=0.318 Sum_probs=44.2
Q ss_pred CHHHHHHcCCeEEEeec-CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEI-QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++++|+++|++|++..+ +.+........+... +.+..++.+|+++++++..+++++.+.+
T Consensus 22 l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 22 IAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-GGEGIGVLADVSTREGCETLAKATIDRY 82 (252)
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-CCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence 46889999999877544 334444444555544 5567788999999999999999887754
No 181
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.97 E-value=4e-05 Score=43.37 Aligned_cols=54 Identities=15% Similarity=-0.007 Sum_probs=41.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+++.|++.|++|+++.++.+...++....... +..+.++.+|+++++++..++.
T Consensus 18 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~ 71 (257)
T PRK09291 18 VALRLARKGHNVIAGVQIAPQVTALRAEAARR-GLALRVEKLDLTDAIDRAQAAE 71 (257)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeeCCCHHHHHHHhc
Confidence 46889999999999888766666655555544 5567888999999998877653
No 182
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.97 E-value=3.6e-05 Score=43.24 Aligned_cols=53 Identities=23% Similarity=0.252 Sum_probs=40.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+++.|+++|++|++.+++.++++...+.+ ....+.+|++++++++++++.+..
T Consensus 16 ia~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~ 68 (223)
T PRK05884 16 IAEGFRNDGHKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFPH 68 (223)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHhh
Confidence 47889999999999888765554433332 245678999999999999887653
No 183
>PRK06182 short chain dehydrogenase; Validated
Probab=97.97 E-value=4.2e-05 Score=43.90 Aligned_cols=54 Identities=20% Similarity=0.163 Sum_probs=41.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++.+++.+++++ +... .+.++.+|++++++++.+++.+.+.+
T Consensus 19 la~~l~~~G~~V~~~~r~~~~l~~----~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~ 72 (273)
T PRK06182 19 TARRLAAQGYTVYGAARRVDKMED----LASL---GVHPLSLDVTDEASIKAAVDTIIAEE 72 (273)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHH----HHhC---CCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence 478899999999998887654433 2222 36678999999999999999887654
No 184
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.97 E-value=7.1e-05 Score=42.51 Aligned_cols=55 Identities=25% Similarity=0.309 Sum_probs=40.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|+.|++.|++|++..++.+.. .+.+... .+.++.+|+++++++.++++.+.+.+
T Consensus 23 ~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06463 23 IAEAFLREGAKVAVLYNSAENE---AKELREK---GVFTIKCDVGNRDQVKKSKEVVEKEF 77 (255)
T ss_pred HHHHHHHCCCEEEEEeCCcHHH---HHHHHhC---CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4789999999998875543321 2233322 36678999999999999999987764
No 185
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.95 E-value=5.4e-05 Score=42.74 Aligned_cols=51 Identities=20% Similarity=0.155 Sum_probs=40.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++. .... +.++.++.+|++++++++++++++.+.+
T Consensus 24 la~~l~~~G~~v~~~~~~~---------~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 24 VALAFVEAGAKVIGFDQAF---------LTQE-DYPFATFVLDVSDAAAVAQVCQRLLAET 74 (252)
T ss_pred HHHHHHHCCCEEEEEecch---------hhhc-CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4788999999999988764 1222 4567889999999999999999887654
No 186
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.94 E-value=5e-05 Score=43.15 Aligned_cols=51 Identities=8% Similarity=0.132 Sum_probs=40.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++|+.+. .. +..+.++.+|++++++++.+++.+.+.+
T Consensus 25 ia~~l~~~G~~v~~~~r~~~~---------~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 25 TVARLLEAGARVVTTARSRPD---------DL-PEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred HHHHHHHCCCEEEEEeCChhh---------hc-CCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 478899999999998886432 11 3457788999999999999999887764
No 187
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.92 E-value=6e-05 Score=43.47 Aligned_cols=53 Identities=9% Similarity=0.106 Sum_probs=40.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|++.|++|++++|+.+.++. +... .+.++.+|++++++++.+++.+.+.
T Consensus 20 la~~l~~~G~~Vi~~~r~~~~~~~----l~~~---~~~~~~~Dl~d~~~~~~~~~~~~~~ 72 (277)
T PRK05993 20 CARALQSDGWRVFATCRKEEDVAA----LEAE---GLEAFQLDYAEPESIAALVAQVLEL 72 (277)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHH----HHHC---CceEEEccCCCHHHHHHHHHHHHHH
Confidence 478899999999999887655443 2222 3567899999999999999988654
No 188
>KOG4169|consensus
Probab=97.92 E-value=4.9e-05 Score=43.67 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=42.6
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++.|++.|..+.+.+-+.+..+. .+.+.+.. ...+.|++|||++..+++.+++++...+
T Consensus 22 sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 22 SKALLEKGIKVLVIDDSEENPEA-IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred HHHHHHcCchheeehhhhhCHHH-HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 67899999997665444444333 33343321 3478899999999999999999998876
No 189
>PRK07023 short chain dehydrogenase; Provisional
Probab=97.92 E-value=8.5e-05 Score=41.87 Aligned_cols=54 Identities=7% Similarity=0.013 Sum_probs=39.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH-HHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL-DFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~-~~~~ 60 (69)
+++.|++.|++|++++++.... . .... +.++.++.+|+++.+++..++.+ +.+.
T Consensus 17 ia~~l~~~G~~v~~~~r~~~~~--~---~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 71 (243)
T PRK07023 17 LAEQLLQPGIAVLGVARSRHPS--L---AAAA-GERLAEVELDLSDAAAAAAWLAGDLLAA 71 (243)
T ss_pred HHHHHHhCCCEEEEEecCcchh--h---hhcc-CCeEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 4788999999999888765421 1 1222 45688899999999999998776 4433
No 190
>PRK08324 short chain dehydrogenase; Validated
Probab=97.92 E-value=7.9e-05 Score=48.07 Aligned_cols=59 Identities=20% Similarity=0.245 Sum_probs=46.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|++.|++|++++++.+........+... ..+.++.+|+++++++..+++.+.+.+
T Consensus 438 la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 438 TAKRLAAEGACVVLADLDEEAAEAAAAELGGP--DRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred HHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 47889999999999999877666655555332 357788999999999999999887654
No 191
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.89 E-value=6.1e-05 Score=42.98 Aligned_cols=51 Identities=18% Similarity=0.183 Sum_probs=40.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.+++..... ..++.++.+|++++++++++++.+.+.+
T Consensus 25 la~~l~~~G~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 25 IVKELLANGANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred HHHHHHHCCCEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47889999999999887654321 2356788999999999999999987764
No 192
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00012 Score=40.99 Aligned_cols=53 Identities=9% Similarity=0.023 Sum_probs=39.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+++.|++.|++|++++++.+..+.. ... ..+.++.+|++++++++++++.+..
T Consensus 17 la~~l~~~G~~V~~~~r~~~~~~~~----~~~--~~~~~~~~D~~d~~~~~~~~~~~~~ 69 (225)
T PRK08177 17 LVDRLLERGWQVTATVRGPQQDTAL----QAL--PGVHIEKLDMNDPASLDQLLQRLQG 69 (225)
T ss_pred HHHHHHhCCCEEEEEeCCCcchHHH----Hhc--cccceEEcCCCCHHHHHHHHHHhhc
Confidence 4788999999999998876654432 222 2456778999999999999887753
No 193
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=97.78 E-value=0.00022 Score=37.69 Aligned_cols=59 Identities=10% Similarity=0.098 Sum_probs=41.1
Q ss_pred CHHHHHHcCC-eEEEeecCcchHHHH---HHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGC-KVACAEIQKDLNEET---VQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~-~V~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|+++|+ .|++..++.+..+.. ...+... +.++.++.+|+++++++..+++.+...
T Consensus 16 ~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 16 LARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL-GAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred HHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3678889997 466676654432221 2444444 567788999999999999998887653
No 194
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00014 Score=41.74 Aligned_cols=54 Identities=13% Similarity=0.011 Sum_probs=40.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++++++.+..+. +... .+.++.+|+++.+++.++++.+.+.+
T Consensus 17 la~~l~~~G~~V~~~~r~~~~~~~----~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~ 70 (274)
T PRK05693 17 LADAFKAAGYEVWATARKAEDVEA----LAAA---GFTAVQLDVNDGAALARLAEELEAEH 70 (274)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHH----HHHC---CCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence 468899999999998887554332 2222 25678999999999999999887654
No 195
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.76 E-value=0.00012 Score=43.32 Aligned_cols=60 Identities=12% Similarity=-0.054 Sum_probs=41.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhh--------C-C---CceeEEEccC--CC------------------HH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQV--------A-P---GAAKGYYCDV--GN------------------VD 48 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~--------~-~---~~~~~~~~Dv--~~------------------~~ 48 (69)
+|+.|+++|++|++ .++.++++.+...+... . + .....+.+|+ ++ ++
T Consensus 27 ~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (303)
T PLN02730 27 IAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNW 105 (303)
T ss_pred HHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhhhcccccccCCHH
Confidence 58899999999988 56666666655544321 0 1 1135678898 43 34
Q ss_pred HHHHHHHHHHHHh
Q psy12399 49 SVDLRIGLDFRKI 61 (69)
Q Consensus 49 ~~~~~v~~~~~~~ 61 (69)
+++.+++.+.+++
T Consensus 106 ~v~~l~~~i~~~~ 118 (303)
T PLN02730 106 TVQEVAESVKADF 118 (303)
T ss_pred HHHHHHHHHHHHc
Confidence 8999999988765
No 196
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.64 E-value=0.00037 Score=50.61 Aligned_cols=33 Identities=18% Similarity=0.025 Sum_probs=26.8
Q ss_pred HHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 27 QMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 27 ~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+.++.. |.++.++.+|++|.++++.+++.+.+.
T Consensus 2087 a~l~~~-G~~v~y~~~DVtD~~av~~av~~v~~~ 2119 (2582)
T TIGR02813 2087 AAFKAA-GASAEYASADVTNSVSVAATVQPLNKT 2119 (2582)
T ss_pred HHHHhc-CCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence 344444 677889999999999999999998765
No 197
>PRK08264 short chain dehydrogenase; Validated
Probab=97.63 E-value=0.00023 Score=39.95 Aligned_cols=48 Identities=17% Similarity=0.106 Sum_probs=37.9
Q ss_pred CHHHHHHcCC-eEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGC-KVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|++.|+ +|++++++.++..+ . +..+.++.+|+++.++++++++.
T Consensus 22 la~~l~~~G~~~V~~~~r~~~~~~~-------~-~~~~~~~~~D~~~~~~~~~~~~~ 70 (238)
T PRK08264 22 FVEQLLARGAAKVYAAARDPESVTD-------L-GPRVVPLQLDVTDPASVAAAAEA 70 (238)
T ss_pred HHHHHHHCCcccEEEEecChhhhhh-------c-CCceEEEEecCCCHHHHHHHHHh
Confidence 4788999999 89888887554332 2 55688899999999999888765
No 198
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=97.59 E-value=0.00074 Score=38.16 Aligned_cols=60 Identities=22% Similarity=0.315 Sum_probs=42.3
Q ss_pred CHHHHHHcCCeEEEeecCcch--HHHHHHHHHhhCC-CceeEEEccCCC-HHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDL--NEETVQMVNQVAP-GAAKGYYCDVGN-VDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~Dv~~-~~~~~~~v~~~~~~~ 61 (69)
+|+.|++.|++|++..++.+. .+......... + ....+..+|+++ .++++.+++.+...+
T Consensus 21 ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~ 84 (251)
T COG1028 21 IARALAREGARVVVAARRSEEEAAEALAAAIKEA-GGGRAAAVAADVSDDEESVEALVAAAEEEF 84 (251)
T ss_pred HHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhc-CCCcEEEEEecCCCCHHHHHHHHHHHHHHc
Confidence 478999999998876665443 33333333211 2 257778899998 999999999998874
No 199
>KOG1610|consensus
Probab=97.56 E-value=0.00055 Score=40.86 Aligned_cols=58 Identities=14% Similarity=0.130 Sum_probs=45.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|++|.+.|.+|++...+++.++.+..+.. ..+...+..||+++++++++.+.+.+.+
T Consensus 45 LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~V~~~l 102 (322)
T KOG1610|consen 45 LAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQWVKKHL 102 (322)
T ss_pred HHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence 478999999999887666665566555543 3467778999999999999998887764
No 200
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.54 E-value=0.0002 Score=40.61 Aligned_cols=46 Identities=15% Similarity=0.066 Sum_probs=36.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDF 58 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 58 (69)
+|+.|+++|++|++.+++.+... . ..++.+|+++.++++++++++.
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~-------~~~~~~Dl~~~~~v~~~~~~~~ 46 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L-------DGFIQADLGDPASIDAAVAALP 46 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h-------hHhhcccCCCHHHHHHHHHHhc
Confidence 68999999999999988755421 1 1246899999999999988763
No 201
>KOG1502|consensus
Probab=97.54 E-value=0.00028 Score=42.29 Aligned_cols=56 Identities=13% Similarity=0.069 Sum_probs=42.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH--HHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE--TVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
|++.|+++|++|..+-|+.++.+. ....++.. +.+...+..|++++++.+.+++.+
T Consensus 22 ivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a-~~~l~l~~aDL~d~~sf~~ai~gc 79 (327)
T KOG1502|consen 22 IVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA-KERLKLFKADLLDEGSFDKAIDGC 79 (327)
T ss_pred HHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC-cccceEEeccccccchHHHHHhCC
Confidence 478999999999988887665333 34444433 456888999999999999987753
No 202
>KOG1207|consensus
Probab=97.53 E-value=0.00029 Score=39.38 Aligned_cols=50 Identities=14% Similarity=0.134 Sum_probs=38.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRI 54 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v 54 (69)
+++.|++.|+.|+...|++..+..+..+ . +.-+..+..|++.++.+.+++
T Consensus 23 ~v~~La~aGA~ViAvaR~~a~L~sLV~e---~-p~~I~Pi~~Dls~wea~~~~l 72 (245)
T KOG1207|consen 23 IVLSLAKAGAQVIAVARNEANLLSLVKE---T-PSLIIPIVGDLSAWEALFKLL 72 (245)
T ss_pred HHHHHHhcCCEEEEEecCHHHHHHHHhh---C-CcceeeeEecccHHHHHHHhh
Confidence 4788999999999999987776665544 3 445778899999988777654
No 203
>PRK08017 oxidoreductase; Provisional
Probab=97.47 E-value=0.00069 Score=38.33 Aligned_cols=52 Identities=25% Similarity=0.275 Sum_probs=39.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+++.|+++|++|++++++.++.+. +... + +..+.+|+++.+++..+++.+..
T Consensus 18 la~~l~~~g~~v~~~~r~~~~~~~----~~~~-~--~~~~~~D~~~~~~~~~~~~~i~~ 69 (256)
T PRK08017 18 AALELKRRGYRVLAACRKPDDVAR----MNSL-G--FTGILLDLDDPESVERAADEVIA 69 (256)
T ss_pred HHHHHHHCCCEEEEEeCCHHHhHH----HHhC-C--CeEEEeecCCHHHHHHHHHHHHH
Confidence 468899999999988887654433 2222 3 56788999999999998888765
No 204
>KOG1209|consensus
Probab=97.47 E-value=0.00071 Score=38.96 Aligned_cols=53 Identities=25% Similarity=0.169 Sum_probs=42.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+++.|+++|+.|..+.|..+....+.... + ...+..|+++++++..+..++..
T Consensus 24 la~ef~~~G~~V~AtaR~~e~M~~L~~~~----g--l~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 24 LAKEFARNGYLVYATARRLEPMAQLAIQF----G--LKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred HHHHHHhCCeEEEEEccccchHhhHHHhh----C--CeeEEeccCChHHHHHHHHHHhh
Confidence 37889999999999988776666544332 3 66789999999999998888776
No 205
>KOG1210|consensus
Probab=97.43 E-value=0.00053 Score=40.99 Aligned_cols=60 Identities=22% Similarity=0.073 Sum_probs=49.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCC-ceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPG-AAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+|..+..+|++|.++.|+..++.+++..++-.+.. ++.+..+|+++.+++...++.+...
T Consensus 49 la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~ 109 (331)
T KOG1210|consen 49 LALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDL 109 (331)
T ss_pred HHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhc
Confidence 46788899999999999999999988888644222 4778999999999999999888543
No 206
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.00071 Score=37.74 Aligned_cols=51 Identities=14% Similarity=0.045 Sum_probs=37.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDF 58 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 58 (69)
++++|+++|++|++++++.+..++ +... + +.++.+|+++.++++++++.+.
T Consensus 17 la~~L~~~G~~v~~~~r~~~~~~~----~~~~-~--~~~~~~D~~~~~~v~~~~~~~~ 67 (222)
T PRK06953 17 FVRQYRADGWRVIATARDAAALAA----LQAL-G--AEALALDVADPASVAGLAWKLD 67 (222)
T ss_pred HHHHHHhCCCEEEEEECCHHHHHH----HHhc-c--ceEEEecCCCHHHHHHHHHHhc
Confidence 467899999999998887544332 2222 2 4578999999999999877653
No 207
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.00084 Score=37.69 Aligned_cols=50 Identities=16% Similarity=0.231 Sum_probs=36.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|++++++.+..++..... ...++.+|+++++++.++++.
T Consensus 25 ~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~ 74 (245)
T PRK07060 25 CAVALAQRGARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAA 74 (245)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHH
Confidence 46789999999999888765444332221 245678999999998887765
No 208
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.35 E-value=0.00047 Score=40.53 Aligned_cols=63 Identities=19% Similarity=0.270 Sum_probs=41.0
Q ss_pred CHHHHHHcCCe-EEEeecCc---chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhhcccC
Q psy12399 1 MALEFARQGCK-VACAEIQK---DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKILSYCT 66 (69)
Q Consensus 1 ia~~la~~G~~-V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~~ 66 (69)
++..|++.|++ |.+++|+. ++.+++.+.+... +..+....+|+++.+++...++.. .++.+|+
T Consensus 141 ia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~-~~~~~~~~~d~~~~~~~~~~~~~~--DilINaT 207 (289)
T PRK12548 141 IQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE-VPECIVNVYDLNDTEKLKAEIASS--DILVNAT 207 (289)
T ss_pred HHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc-CCCceeEEechhhhhHHHhhhccC--CEEEEeC
Confidence 46778899997 88898876 5566666666544 334455677888877776655432 3444444
No 209
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.34 E-value=0.0013 Score=39.16 Aligned_cols=55 Identities=11% Similarity=0.165 Sum_probs=38.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+++.|+++|++|++++++..........+. . +.++.++.+|+++.+++.++++..
T Consensus 20 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (349)
T TIGR02622 20 LSLWLLELGAEVYGYSLDPPTSPNLFELLN-L-AKKIEDHFGDIRDAAKLRKAIAEF 74 (349)
T ss_pred HHHHHHHCCCEEEEEeCCCccchhHHHHHh-h-cCCceEEEccCCCHHHHHHHHhhc
Confidence 478899999999988876554333322222 2 335667899999999999888753
No 210
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.26 E-value=0.0015 Score=41.92 Aligned_cols=55 Identities=22% Similarity=0.268 Sum_probs=40.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC----C----CceeEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA----P----GAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
++++|++.|++|+++.|+.+.+..+.+.+.... + .++.++.+|+++.+++..++.
T Consensus 96 LAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg 158 (576)
T PLN03209 96 TVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG 158 (576)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence 468899999999998888777666555443210 1 247788999999999877554
No 211
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.26 E-value=0.0026 Score=39.18 Aligned_cols=57 Identities=19% Similarity=0.237 Sum_probs=39.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++.|+++|++|++.++... .+.+.+..... + ...+.+|++++++++.+++.+.+.+
T Consensus 226 la~~l~~~Ga~vi~~~~~~~-~~~l~~~~~~~-~--~~~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 226 IAEVLARDGAHVVCLDVPAA-GEALAAVANRV-G--GTALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred HHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc-C--CeEEEEeCCCHHHHHHHHHHHHHhC
Confidence 47889999999998877432 12222222222 2 3467899999999999999887654
No 212
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.23 E-value=0.0017 Score=38.15 Aligned_cols=56 Identities=13% Similarity=0.079 Sum_probs=37.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|+++.++............... ..++.++.+|+++.+++.++++.
T Consensus 21 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~ 77 (325)
T PLN02989 21 IVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDG 77 (325)
T ss_pred HHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcC
Confidence 478899999999887776554333322222110 23577889999999998887753
No 213
>PLN02583 cinnamoyl-CoA reductase
Probab=97.22 E-value=0.0018 Score=37.92 Aligned_cols=54 Identities=13% Similarity=0.062 Sum_probs=35.1
Q ss_pred CHHHHHHcCCeEEEeecCcch--HHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDL--NEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+++.|+++|++|+++.|+... .......+... +.++.++.+|+++.+++..++.
T Consensus 22 lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~~~~~l~ 77 (297)
T PLN02583 22 LVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-EERLKVFDVDPLDYHSILDALK 77 (297)
T ss_pred HHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-CCceEEEEecCCCHHHHHHHHc
Confidence 478899999999887774322 22222222222 3357778899999998876554
No 214
>KOG1611|consensus
Probab=97.17 E-value=0.0032 Score=36.36 Aligned_cols=59 Identities=14% Similarity=0.091 Sum_probs=40.3
Q ss_pred HHHHHH-cCCeEEEe-ecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 2 ALEFAR-QGCKVACA-EIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 2 a~~la~-~G~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
++.|.+ .|..+++. .|+.+.+.+..+..... ..+++.++.||++.+++..+++++.+-.
T Consensus 20 Vk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~-d~rvHii~Ldvt~deS~~~~~~~V~~iV 80 (249)
T KOG1611|consen 20 VKELLKDKGIEVIIATARDPEKAATELALKSKS-DSRVHIIQLDVTCDESIDNFVQEVEKIV 80 (249)
T ss_pred HHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc-CCceEEEEEecccHHHHHHHHHHHHhhc
Confidence 455554 56666664 55555543333443333 5789999999999999999999987653
No 215
>KOG1478|consensus
Probab=97.16 E-value=0.0042 Score=36.71 Aligned_cols=61 Identities=11% Similarity=0.011 Sum_probs=48.2
Q ss_pred CHHHHHHcCCe-----EEEeecCcchHHHHHHHHHhhCC---CceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCK-----VACAEIQKDLNEETVQMVNQVAP---GAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~-----V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
||.+|.+..-. +++++|+.+++++.+..+.+.++ .++.++..|++|-.++-++..++.+++
T Consensus 19 i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf 87 (341)
T KOG1478|consen 19 ICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRF 87 (341)
T ss_pred HHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHh
Confidence 46677765443 45678999999999988876543 256789999999999999999998876
No 216
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0027 Score=35.45 Aligned_cols=48 Identities=15% Similarity=0.241 Sum_probs=37.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|++.|++|++++|+.+. .. . ..++.+|++++++++++++.+.+.
T Consensus 19 ia~~l~~~G~~v~~~~r~~~~---------~~-~--~~~~~~D~~~~~~~~~~~~~~~~~ 66 (234)
T PRK07577 19 LSLRLANLGHQVIGIARSAID---------DF-P--GELFACDLADIEQTAATLAQINEI 66 (234)
T ss_pred HHHHHHHCCCEEEEEeCCccc---------cc-C--ceEEEeeCCCHHHHHHHHHHHHHh
Confidence 478899999999998886542 11 2 135789999999999999987664
No 217
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.11 E-value=0.0027 Score=37.88 Aligned_cols=54 Identities=9% Similarity=0.022 Sum_probs=37.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|++.|++|++++++..........+. . +.++.++.+|+++.+++.++++.
T Consensus 26 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~~~~~~ 79 (353)
T PLN02896 26 LVKLLLQRGYTVHATLRDPAKSLHLLSKWK-E-GDRLRLFRADLQEEGSFDEAVKG 79 (353)
T ss_pred HHHHHHHCCCEEEEEeCChHHHHHHHHhhc-c-CCeEEEEECCCCCHHHHHHHHcC
Confidence 478899999999887776544443333332 1 34577889999999998887653
No 218
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0049 Score=34.17 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=36.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++ ++|++++|+.+..+...+. ...+.++.+|++++++++++++.
T Consensus 19 l~~~l~~~-~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~ 68 (227)
T PRK08219 19 IARELAPT-HTLLLGGRPAERLDELAAE-----LPGATPFPVDLTDPEAIAAAVEQ 68 (227)
T ss_pred HHHHHHhh-CCEEEEeCCHHHHHHHHHH-----hccceEEecCCCCHHHHHHHHHh
Confidence 36788888 9999988875544433222 22466789999999999988765
No 219
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=96.87 E-value=0.0083 Score=35.38 Aligned_cols=55 Identities=7% Similarity=0.073 Sum_probs=35.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+++.|+++|++|+++++...........+....+.+..++.+|+++.+++..+++
T Consensus 16 l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 70 (338)
T PRK10675 16 TCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILH 70 (338)
T ss_pred HHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHh
Confidence 4688999999998876532222222222222213356678899999998888765
No 220
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.85 E-value=0.0065 Score=35.71 Aligned_cols=56 Identities=14% Similarity=0.048 Sum_probs=36.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhh-CCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQV-APGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|+++.++....+......... ...++.++.+|+++++++..+++.
T Consensus 21 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (322)
T PLN02986 21 IVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG 77 (322)
T ss_pred HHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC
Confidence 46789999999987766654433322222111 023577889999999988887763
No 221
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=96.83 E-value=0.0054 Score=36.42 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=36.7
Q ss_pred CHHHHHHcCCeEEEeecCcch--HHHHHHHHH---hhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDL--NEETVQMVN---QVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
++++|++.|++|++++++.+. ......... ...+..+.++.+|++|.+++.++++..
T Consensus 16 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 77 (343)
T TIGR01472 16 LAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI 77 (343)
T ss_pred HHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC
Confidence 478899999999988776432 111111111 000234678899999999998888753
No 222
>PLN02686 cinnamoyl-CoA reductase
Probab=96.82 E-value=0.0081 Score=36.31 Aligned_cols=56 Identities=11% Similarity=0.057 Sum_probs=37.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-----CCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA-----PGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+++.|+++|++|+++.++.+....+ ..+.... ...+.++.+|+++.+++.++++.+
T Consensus 69 lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 69 IVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 4788999999998766654433333 2221110 124677899999999998888754
No 223
>PLN02650 dihydroflavonol-4-reductase
Probab=96.82 E-value=0.0075 Score=35.93 Aligned_cols=55 Identities=11% Similarity=0.117 Sum_probs=36.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+++.|+++|++|+++.++............... ..++.++.+|+++.+.+..+++
T Consensus 21 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~ 76 (351)
T PLN02650 21 LVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR 76 (351)
T ss_pred HHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh
Confidence 478899999999887776554443332222110 1256778999999988887765
No 224
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=96.81 E-value=0.0045 Score=36.70 Aligned_cols=56 Identities=11% Similarity=-0.021 Sum_probs=37.0
Q ss_pred CHHHHHHcCCeEEEeecCcch-----HHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDL-----NEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+++.|++.|++|+++++.... .+.+....... +..+.++.+|+++.+++..+++..
T Consensus 22 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 22 LTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPN-KARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred HHHHHHHCCCEEEEEecccccccccchhhhccccccc-cCceEEEEecCCCHHHHHHHHHHc
Confidence 478899999999887765432 11111111111 235778899999999999888754
No 225
>PRK12742 oxidoreductase; Provisional
Probab=96.77 E-value=0.0085 Score=33.51 Aligned_cols=50 Identities=22% Similarity=0.178 Sum_probs=33.5
Q ss_pred CHHHHHHcCCeEEEeecC-cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQ-KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|+++.+. .+..+++... . + ..++.+|+++.+++.++++.
T Consensus 22 ~a~~l~~~G~~v~~~~~~~~~~~~~l~~~---~-~--~~~~~~D~~~~~~~~~~~~~ 72 (237)
T PRK12742 22 IVRRFVTDGANVRFTYAGSKDAAERLAQE---T-G--ATAVQTDSADRDAVIDVVRK 72 (237)
T ss_pred HHHHHHHCCCEEEEecCCCHHHHHHHHHH---h-C--CeEEecCCCCHHHHHHHHHH
Confidence 478899999999876543 3333332222 2 2 45678999999998887754
No 226
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.77 E-value=0.0068 Score=37.45 Aligned_cols=51 Identities=20% Similarity=0.150 Sum_probs=35.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+++.|+++|++|++++++.++... ..... ...+..+.+|+++++++.+.+.
T Consensus 194 LA~~La~~G~~Vi~l~r~~~~l~~---~~~~~-~~~v~~v~~Dvsd~~~v~~~l~ 244 (406)
T PRK07424 194 LLKELHQQGAKVVALTSNSDKITL---EINGE-DLPVKTLHWQVGQEAALAELLE 244 (406)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHH---HHhhc-CCCeEEEEeeCCCHHHHHHHhC
Confidence 467899999999988876544332 22222 2345678899999998877553
No 227
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.76 E-value=0.0089 Score=35.45 Aligned_cols=53 Identities=9% Similarity=-0.041 Sum_probs=35.8
Q ss_pred CHHHHHHcC--CeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQG--CKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|++.| ++|++.+++......+...+. ..++.++.+|++|++++.++++.
T Consensus 20 l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~l~~~~~~ 74 (324)
T TIGR03589 20 FISRLLENYNPKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDVRDKERLTRALRG 74 (324)
T ss_pred HHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccCCCHHHHHHHHhc
Confidence 467888886 678888776543333222221 23577889999999999887754
No 228
>KOG1371|consensus
Probab=96.69 E-value=0.012 Score=35.62 Aligned_cols=56 Identities=13% Similarity=0.112 Sum_probs=38.6
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhC--CCceeEEEccCCCHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVA--PGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+.+|.+.|+.|+++|.-..........++... +..+.+...|+.|.+.++++++..
T Consensus 19 ~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~ 76 (343)
T KOG1371|consen 19 VLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV 76 (343)
T ss_pred HHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc
Confidence 67899999999987653222222222222221 367889999999999999988765
No 229
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.67 E-value=0.012 Score=31.79 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=36.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+++.|+++|++|.+..|+.++.++ ...+..+.+|+.+++++.++++
T Consensus 14 l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~ 59 (183)
T PF13460_consen 14 LAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALK 59 (183)
T ss_dssp HHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHT
T ss_pred HHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhh
Confidence 367899999999998888765554 2457788999999988888765
No 230
>PLN02214 cinnamoyl-CoA reductase
Probab=96.67 E-value=0.013 Score=35.07 Aligned_cols=55 Identities=9% Similarity=0.028 Sum_probs=36.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH-HHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE-TVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|.++.|+.+.... ....+... ..++.++.+|+++.+++.++++.
T Consensus 26 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~ 81 (342)
T PLN02214 26 IVKILLERGYTVKGTVRNPDDPKNTHLRELEGG-KERLILCKADLQDYEALKAAIDG 81 (342)
T ss_pred HHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC-CCcEEEEecCcCChHHHHHHHhc
Confidence 467899999999888776543221 12222211 23577788999999998887653
No 231
>KOG2733|consensus
Probab=96.66 E-value=0.013 Score=35.97 Aligned_cols=56 Identities=18% Similarity=0.114 Sum_probs=43.3
Q ss_pred HHHHHH----cCCeEEEeecCcchHHHHHHHHHhhCC---CceeEEEccCCCHHHHHHHHHHH
Q psy12399 2 ALEFAR----QGCKVACAEIQKDLNEETVQMVNQVAP---GAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 2 a~~la~----~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
++.+.+ .|.+..+.+|++.++++....+.+..+ .....+.+|.+|++++.++.+++
T Consensus 22 vee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~ 84 (423)
T KOG2733|consen 22 VEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA 84 (423)
T ss_pred HHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence 455555 777888999999999998888865522 23348899999999999998765
No 232
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.56 E-value=0.0059 Score=37.60 Aligned_cols=53 Identities=21% Similarity=0.268 Sum_probs=41.5
Q ss_pred CHHHHHHcC-CeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQG-CKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+|+.|+++| .+|.+.+|+.++..+..... +.++....+|+.+.+.+.+++++.
T Consensus 16 va~~la~~~d~~V~iAdRs~~~~~~i~~~~----~~~v~~~~vD~~d~~al~~li~~~ 69 (389)
T COG1748 16 VAHKLAQNGDGEVTIADRSKEKCARIAELI----GGKVEALQVDAADVDALVALIKDF 69 (389)
T ss_pred HHHHHHhCCCceEEEEeCCHHHHHHHHhhc----cccceeEEecccChHHHHHHHhcC
Confidence 367889999 88999999877666654442 347888999999999998887765
No 233
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.54 E-value=0.011 Score=36.13 Aligned_cols=56 Identities=18% Similarity=0.150 Sum_probs=37.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH--HHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE--TVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+++.|+++|++|+++.|+...... ........ ...+.++.+|++|++++..+++..
T Consensus 76 l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~ 133 (390)
T PLN02657 76 VVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE-LPGAEVVFGDVTDADSLRKVLFSE 133 (390)
T ss_pred HHHHHHHCCCEEEEEEechhhccccchhhHHhhh-cCCceEEEeeCCCHHHHHHHHHHh
Confidence 367889999999888776543211 11112112 235778899999999999988753
No 234
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=96.49 E-value=0.014 Score=34.20 Aligned_cols=56 Identities=11% Similarity=0.054 Sum_probs=35.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhh-CCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQV-APGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|.++.++.............. ...++.++.+|+++++++..+++.
T Consensus 20 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (322)
T PLN02662 20 LVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDG 76 (322)
T ss_pred HHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcC
Confidence 47889999999988777654332222211111 013577889999999888777653
No 235
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=96.46 E-value=0.015 Score=33.81 Aligned_cols=54 Identities=9% Similarity=0.046 Sum_probs=34.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|++.++............... ..+..+.+|+++++++..+++.
T Consensus 15 l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~ 68 (328)
T TIGR01179 15 TVRQLLESGHEVVVLDNLSNGSPEALKRGERI--TRVTFVEGDLRDRELLDRLFEE 68 (328)
T ss_pred HHHHHHhCCCeEEEEeCCCccchhhhhhhccc--cceEEEECCCCCHHHHHHHHHh
Confidence 46789999999987765332222222222221 1466788999999999887763
No 236
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.011 Score=33.92 Aligned_cols=48 Identities=21% Similarity=0.205 Sum_probs=31.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRI 54 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v 54 (69)
+++.|+++|++|++++++...... .. .. +. ...+.+|+++.+++.+.+
T Consensus 30 la~~l~~~G~~Vi~~~r~~~~~~~---~~-~~-~~-~~~~~~D~~~~~~~~~~~ 77 (245)
T PRK12367 30 LTKAFRAKGAKVIGLTHSKINNSE---SN-DE-SP-NEWIKWECGKEESLDKQL 77 (245)
T ss_pred HHHHHHHCCCEEEEEECCchhhhh---hh-cc-CC-CeEEEeeCCCHHHHHHhc
Confidence 478899999999988876522111 11 11 22 256789999999887644
No 237
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.42 E-value=0.0018 Score=38.26 Aligned_cols=17 Identities=18% Similarity=0.298 Sum_probs=14.4
Q ss_pred CHHHHHHcCCeEEEeec
Q psy12399 1 MALEFARQGCKVACAEI 17 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~ 17 (69)
+|+.|+++|++|++.++
T Consensus 26 ~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 26 IAKALAEAGATILVGTW 42 (299)
T ss_pred HHHHHHHCCCEEEEEec
Confidence 47899999999998654
No 238
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.35 E-value=0.023 Score=31.40 Aligned_cols=52 Identities=12% Similarity=0.069 Sum_probs=36.4
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
++.|++.|++|++++|+.++.+.+.+.+...++ .....+|..+.+++.++++
T Consensus 45 a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~ 96 (194)
T cd01078 45 AVLLAREGARVVLVGRDLERAQKAADSLRARFG--EGVGAVETSDDAARAAAIK 96 (194)
T ss_pred HHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC--CcEEEeeCCCHHHHHHHHh
Confidence 577889999999988887777777666643312 2344668888877776654
No 239
>PLN02240 UDP-glucose 4-epimerase
Probab=96.35 E-value=0.033 Score=33.06 Aligned_cols=55 Identities=15% Similarity=0.166 Sum_probs=35.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHH----hhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVN----QVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|++.++...........+. .. +..+.++.+|+++++++..+++.
T Consensus 21 l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~~~ 79 (352)
T PLN02240 21 TVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDL-GDNLVFHKVDLRDKEALEKVFAS 79 (352)
T ss_pred HHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhccc-CccceEEecCcCCHHHHHHHHHh
Confidence 467899999999887654322111111111 11 23567889999999999888764
No 240
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB. When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.
Probab=96.34 E-value=0.022 Score=32.01 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=29.5
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCC
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVG 45 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 45 (69)
+..|+++|+.|..+|.+...++.+.+..+.. +..+.....|+.
T Consensus 45 alyLA~~G~~VtAvD~s~~al~~l~~~a~~~-~l~i~~~~~Dl~ 87 (192)
T PF03848_consen 45 ALYLASQGFDVTAVDISPVALEKLQRLAEEE-GLDIRTRVADLN 87 (192)
T ss_dssp HHHHHHTT-EEEEEESSHHHHHHHHHHHHHT-T-TEEEEE-BGC
T ss_pred HHHHHHCCCeEEEEECCHHHHHHHHHHHhhc-CceeEEEEecch
Confidence 4679999999999999988777766655544 555666666653
No 241
>PLN00198 anthocyanidin reductase; Provisional
Probab=96.28 E-value=0.035 Score=32.92 Aligned_cols=54 Identities=13% Similarity=0.171 Sum_probs=35.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHH--HHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQ--MVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|+++.++......... .+.. ..++.++.+|+++++++.++++.
T Consensus 25 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~ 80 (338)
T PLN00198 25 LIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE--LGDLKIFGADLTDEESFEAPIAG 80 (338)
T ss_pred HHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC--CCceEEEEcCCCChHHHHHHHhc
Confidence 467899999999877666443322211 1111 12467889999999988887653
No 242
>PLN02572 UDP-sulfoquinovose synthase
Probab=95.94 E-value=0.065 Score=33.38 Aligned_cols=56 Identities=18% Similarity=0.143 Sum_probs=34.7
Q ss_pred CHHHHHHcCCeEEEeecCc---ch----H---------HHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQK---DL----N---------EETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~---~~----~---------~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
++++|+++|++|+++++.. .. . ......+....+.++.++.+|+++.+++.++++.
T Consensus 63 Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l~~ 134 (442)
T PLN02572 63 TALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAFKS 134 (442)
T ss_pred HHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHHHh
Confidence 4789999999998875321 00 0 0011111111023577889999999999888775
No 243
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=95.88 E-value=0.02 Score=32.76 Aligned_cols=48 Identities=8% Similarity=0.102 Sum_probs=34.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+|++|+++|++|+++++.. .+... . ...+|+++.+++.++++.+.+.+
T Consensus 31 IA~~la~~Ga~Vvlv~~~~--------~l~~~-~----~~~~Dv~d~~s~~~l~~~v~~~~ 78 (227)
T TIGR02114 31 ITETFLSAGHEVTLVTTKR--------ALKPE-P----HPNLSIREIETTKDLLITLKELV 78 (227)
T ss_pred HHHHHHHCCCEEEEEcChh--------hcccc-c----CCcceeecHHHHHHHHHHHHHHc
Confidence 5889999999998876421 01111 1 23579999999999998887764
No 244
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.84 E-value=0.092 Score=29.19 Aligned_cols=51 Identities=6% Similarity=0.035 Sum_probs=36.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+++.|.++|..|+...++.......... .++.++.+|+++.++++++++..
T Consensus 14 l~~~l~~~g~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~ 64 (236)
T PF01370_consen 14 LVRQLLKKGHEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKA 64 (236)
T ss_dssp HHHHHHHTTTEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHH
T ss_pred HHHHHHHcCCcccccccccccccccccc------ceEEEEEeecccccccccccccc
Confidence 4788999999987665554432221111 15778899999999999988775
No 245
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=95.84 E-value=0.026 Score=32.96 Aligned_cols=49 Identities=10% Similarity=-0.039 Sum_probs=34.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|++.|++|++++++.+.... +. ...+.++.+|+++.+++.++++.
T Consensus 16 l~~~L~~~g~~V~~~~r~~~~~~~----~~---~~~~~~~~~D~~~~~~l~~~~~~ 64 (328)
T TIGR03466 16 VVRLLLEQGEEVRVLVRPTSDRRN----LE---GLDVEIVEGDLRDPASLRKAVAG 64 (328)
T ss_pred HHHHHHHCCCEEEEEEecCccccc----cc---cCCceEEEeeCCCHHHHHHHHhC
Confidence 468899999999988886543221 11 12466788999999888877653
No 246
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.83 E-value=0.023 Score=34.48 Aligned_cols=53 Identities=19% Similarity=0.177 Sum_probs=38.2
Q ss_pred HHHHHHcCC--eEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 2 ALEFARQGC--KVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 2 a~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
++.|++.+- +|++.+|+.++++.+.+.+ . +.++....+|+.|.+++.+++++.
T Consensus 14 ~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~-~~~~~~~~~d~~~~~~l~~~~~~~ 68 (386)
T PF03435_consen 14 ARLLARRGPFEEVTVADRNPEKAERLAEKL--L-GDRVEAVQVDVNDPESLAELLRGC 68 (386)
T ss_dssp HHHHHCTTCE-EEEEEESSHHHHHHHHT----T-TTTEEEEE--TTTHHHHHHHHTTS
T ss_pred HHHHhcCCCCCcEEEEECCHHHHHHHHhhc--c-ccceeEEEEecCCHHHHHHHHhcC
Confidence 567777764 6889999988777766554 2 567889999999999998887654
No 247
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=95.75 E-value=0.061 Score=31.17 Aligned_cols=54 Identities=11% Similarity=-0.008 Sum_probs=33.2
Q ss_pred CHHHHHHcC--CeEEEeecCcc-hHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQG--CKVACAEIQKD-LNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G--~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
++++|++.| .+|++.++... ...+....+.. ...+.++.+|+++++++.++++.
T Consensus 15 l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~ 71 (317)
T TIGR01181 15 FVRYILNEHPDAEVIVLDKLTYAGNLENLADLED--NPRYRFVKGDIGDRELVSRLFTE 71 (317)
T ss_pred HHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc--CCCcEEEEcCCcCHHHHHHHHhh
Confidence 367888887 67877665321 11111112211 23567789999999999888765
No 248
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.65 E-value=0.076 Score=34.42 Aligned_cols=56 Identities=13% Similarity=-0.009 Sum_probs=45.6
Q ss_pred CHHHHHHcCCe-EEEeecCcchHHHHHHHHHhhCC-CceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCK-VACAEIQKDLNEETVQMVNQVAP-GAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+|+.+++.+.+ +++.++++.+......++...++ .+..++-+||.|.+.+.++++.
T Consensus 266 l~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~ 323 (588)
T COG1086 266 LCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG 323 (588)
T ss_pred HHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc
Confidence 47888888876 56789988888888888876533 4778899999999999998876
No 249
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.57 E-value=0.039 Score=30.86 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=26.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNV 47 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 47 (69)
++++|+++|++|++++++.... . ..++.++.+|++++
T Consensus 21 ia~~l~~~G~~v~~~~r~~~~~---------~-~~~~~~~~~D~~~~ 57 (235)
T PRK06550 21 QARAFLAQGAQVYGVDKQDKPD---------L-SGNFHFLQLDLSDD 57 (235)
T ss_pred HHHHHHHCCCEEEEEeCCcccc---------c-CCcEEEEECChHHH
Confidence 4788999999999888764321 1 23466778888776
No 250
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.44 E-value=0.051 Score=31.04 Aligned_cols=48 Identities=17% Similarity=0.140 Sum_probs=33.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLR 53 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~ 53 (69)
+|+.|.++|..|++.+++++...+..+. ......+.+|-++++-++++
T Consensus 15 va~~L~~~g~~Vv~Id~d~~~~~~~~~~-----~~~~~~v~gd~t~~~~L~~a 62 (225)
T COG0569 15 VARELSEEGHNVVLIDRDEERVEEFLAD-----ELDTHVVIGDATDEDVLEEA 62 (225)
T ss_pred HHHHHHhCCCceEEEEcCHHHHHHHhhh-----hcceEEEEecCCCHHHHHhc
Confidence 4789999999999999887665542221 12355667777777766654
No 251
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=95.40 E-value=0.092 Score=34.74 Aligned_cols=63 Identities=13% Similarity=0.012 Sum_probs=43.1
Q ss_pred CHHHHHHcCCeEEEee-cCcchHHHHHHHHHhhC---CCceeEEEccCCCHHHHHHHHHHHHHHhhc
Q psy12399 1 MALEFARQGCKVACAE-IQKDLNEETVQMVNQVA---PGAAKGYYCDVGNVDSVDLRIGLDFRKILS 63 (69)
Q Consensus 1 ia~~la~~G~~V~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~ 63 (69)
++.+|+..|++||++. +-..+-.+.-+.+...+ +...+.++.+.++..+++.+++.+-++--.
T Consensus 413 Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq~~ 479 (866)
T COG4982 413 VVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQTE 479 (866)
T ss_pred HHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhcccccc
Confidence 3678999999998864 32333334444443221 456778899999999999999988665433
No 252
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.25 E-value=0.067 Score=31.61 Aligned_cols=49 Identities=12% Similarity=0.133 Sum_probs=33.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|.+..|+.+... .+.. ..+.++.+|+++++++..+++.
T Consensus 16 lv~~Ll~~g~~V~~l~R~~~~~~----~l~~---~~v~~v~~Dl~d~~~l~~al~g 64 (317)
T CHL00194 16 IVRQALDEGYQVRCLVRNLRKAS----FLKE---WGAELVYGDLSLPETLPPSFKG 64 (317)
T ss_pred HHHHHHHCCCeEEEEEcChHHhh----hHhh---cCCEEEECCCCCHHHHHHHHCC
Confidence 36789999999988877643321 1211 2366778899998888776653
No 253
>PLN02427 UDP-apiose/xylose synthase
Probab=95.17 E-value=0.072 Score=32.27 Aligned_cols=56 Identities=9% Similarity=0.040 Sum_probs=34.4
Q ss_pred CHHHHHHc-CCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQ-GCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++ |++|++++++......+..........++.++.+|+++.+++.++++.
T Consensus 30 lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~ 86 (386)
T PLN02427 30 LCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKM 86 (386)
T ss_pred HHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhc
Confidence 36788888 588988877644332221110000023577889999999888877653
No 254
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.16 E-value=0.12 Score=30.95 Aligned_cols=56 Identities=7% Similarity=-0.145 Sum_probs=34.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHH----hhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVN----QVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|.+.|++|+++++...........+. .....++.++.+|+.+.+++..+++.
T Consensus 31 lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~ 90 (348)
T PRK15181 31 LLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN 90 (348)
T ss_pred HHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence 468899999999888765432222111111 11012467788999998887776653
No 255
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=95.14 E-value=0.08 Score=31.99 Aligned_cols=50 Identities=10% Similarity=0.022 Sum_probs=34.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
++..|++.|..|+++|.-..--.+..... ...++..|+.|.+.+.+++.+
T Consensus 16 tv~~Ll~~G~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~ 65 (329)
T COG1087 16 TVRQLLKTGHEVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEE 65 (329)
T ss_pred HHHHHHHCCCeEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHh
Confidence 36789999999999876433222221111 156889999999888887765
No 256
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.058 Score=29.55 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=22.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++ ++|++.+++.. .+.+|++++++++++++.
T Consensus 16 la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~ 52 (199)
T PRK07578 16 VVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEK 52 (199)
T ss_pred HHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHh
Confidence 35677777 77777665421 235677777776666554
No 257
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=95.02 E-value=0.1 Score=29.21 Aligned_cols=47 Identities=9% Similarity=-0.023 Sum_probs=30.6
Q ss_pred CHHHHHHcC--CeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQG--CKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++| ..|+..+++... . . . +.++.++++|+++.++++++.+.
T Consensus 16 ia~~l~~~~~~~~v~~~~~~~~~--~----~--~-~~~~~~~~~Dls~~~~~~~~~~~ 64 (235)
T PRK09009 16 MVKQLLERYPDATVHATYRHHKP--D----F--Q-HDNVQWHALDVTDEAEIKQLSEQ 64 (235)
T ss_pred HHHHHHHhCCCCEEEEEccCCcc--c----c--c-cCceEEEEecCCCHHHHHHHHHh
Confidence 478888885 445555554321 1 1 1 34677889999999998886543
No 258
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=95.01 E-value=0.1 Score=31.13 Aligned_cols=53 Identities=4% Similarity=-0.155 Sum_probs=32.7
Q ss_pred CHHHHHHcCCeEE-EeecCcch--HHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVA-CAEIQKDL--NEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|.++|+.++ +.++.... ..... .+. . +..+.++.+|+++.+++.++++.
T Consensus 17 l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~-~~~~~~~~~Dl~d~~~~~~~~~~ 72 (355)
T PRK10217 17 LVRYIINETSDAVVVVDKLTYAGNLMSLA-PVA-Q-SERFAFEKVDICDRAELARVFTE 72 (355)
T ss_pred HHHHHHHcCCCEEEEEecCccccchhhhh-hcc-c-CCceEEEECCCcChHHHHHHHhh
Confidence 4788999998854 45543221 11111 111 1 23566788999999999888765
No 259
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.70 E-value=0.17 Score=28.50 Aligned_cols=51 Identities=10% Similarity=0.067 Sum_probs=32.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|++.|++|.+..|+.. ....+.++.. |. ..+..|..+++++.++++.
T Consensus 14 v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~-g~--~vv~~d~~~~~~l~~al~g 64 (233)
T PF05368_consen 14 VVRALLSAGFSVRALVRDPS--SDRAQQLQAL-GA--EVVEADYDDPESLVAALKG 64 (233)
T ss_dssp HHHHHHHTTGCEEEEESSSH--HHHHHHHHHT-TT--EEEES-TT-HHHHHHHHTT
T ss_pred HHHHHHhCCCCcEEEEeccc--hhhhhhhhcc-cc--eEeecccCCHHHHHHHHcC
Confidence 36788889999988777652 2333445544 53 4568899998888887653
No 260
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=94.54 E-value=0.081 Score=31.07 Aligned_cols=53 Identities=9% Similarity=0.113 Sum_probs=34.4
Q ss_pred CHHHHHHcC--CeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQG--CKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+++.|+++| ..|.+.++...... ...+... ....++.+|+++++++.++++.+
T Consensus 13 iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~--~~~~~~~~Di~d~~~l~~a~~g~ 67 (280)
T PF01073_consen 13 IVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS--GVKEYIQGDITDPESLEEALEGV 67 (280)
T ss_pred HHHHHHHCCCceEEEEccccccccc--chhhhcc--cceeEEEeccccHHHHHHHhcCC
Confidence 478999999 67777776543211 1122211 12238899999999999987654
No 261
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.45 E-value=0.14 Score=29.17 Aligned_cols=42 Identities=12% Similarity=0.048 Sum_probs=27.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNV 47 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 47 (69)
+++.|++.|++|++..|+.+.... .+. . +..+.++.+|+++.
T Consensus 33 l~~~L~~~g~~V~~~~R~~~~~~~---~~~-~-~~~~~~~~~Dl~d~ 74 (251)
T PLN00141 33 IVEQLLAKGFAVKAGVRDVDKAKT---SLP-Q-DPSLQIVRADVTEG 74 (251)
T ss_pred HHHHHHhCCCEEEEEecCHHHHHH---hcc-c-CCceEEEEeeCCCC
Confidence 367888999999887776543322 111 1 23577788999873
No 262
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=94.43 E-value=0.15 Score=25.60 Aligned_cols=45 Identities=16% Similarity=0.232 Sum_probs=29.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDL 52 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~ 52 (69)
+++.|.+.|.+|++.+.+++..+. +... + ..++.+|.++++..++
T Consensus 13 i~~~L~~~~~~vvvid~d~~~~~~----~~~~-~--~~~i~gd~~~~~~l~~ 57 (116)
T PF02254_consen 13 IAEQLKEGGIDVVVIDRDPERVEE----LREE-G--VEVIYGDATDPEVLER 57 (116)
T ss_dssp HHHHHHHTTSEEEEEESSHHHHHH----HHHT-T--SEEEES-TTSHHHHHH
T ss_pred HHHHHHhCCCEEEEEECCcHHHHH----HHhc-c--cccccccchhhhHHhh
Confidence 357788876689998887655333 3333 4 5567788888777665
No 263
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.13 E-value=0.06 Score=32.14 Aligned_cols=55 Identities=13% Similarity=0.082 Sum_probs=38.8
Q ss_pred CHHHHHHcCC-eEEEeecCcchHHHHHHHHHhhCC-Cce----eEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGC-KVACAEIQKDLNEETVQMVNQVAP-GAA----KGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~Dv~~~~~~~~~v~ 55 (69)
+|+.|++.|. ++++.++++..+-.+..+++..++ .++ ..+.+|++|.+.+..+++
T Consensus 14 L~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~ 74 (293)
T PF02719_consen 14 LVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFE 74 (293)
T ss_dssp HHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT
T ss_pred HHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHh
Confidence 4788888886 588899999888888888864322 223 345889999999998876
No 264
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=94.04 E-value=0.33 Score=28.93 Aligned_cols=53 Identities=8% Similarity=-0.105 Sum_probs=32.2
Q ss_pred CHHHHHHcCCeE-EEeecCc--chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKV-ACAEIQK--DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|..+ +..++.. ....... .+. . +.++.++.+|+++.+++.++++.
T Consensus 16 l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~-~~~~~~~~~Dl~d~~~~~~~~~~ 71 (352)
T PRK10084 16 VVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-D-SERYVFEHADICDRAELDRIFAQ 71 (352)
T ss_pred HHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-c-CCceEEEEecCCCHHHHHHHHHh
Confidence 467889999874 4454422 1112111 111 1 23466789999999999888865
No 265
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=93.69 E-value=0.094 Score=28.30 Aligned_cols=56 Identities=21% Similarity=0.147 Sum_probs=34.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhC------CCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVA------PGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
|+++|+++|++|.+++++.++.+++.+.-.... -..+..+-.=+.+.+++++++..
T Consensus 16 ~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~ 77 (163)
T PF03446_consen 16 MARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFG 77 (163)
T ss_dssp HHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHC
T ss_pred HHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhh
Confidence 578999999999999998776666543210000 01122334446777788777665
No 266
>PRK04148 hypothetical protein; Provisional
Probab=93.60 E-value=0.16 Score=27.06 Aligned_cols=39 Identities=18% Similarity=0.255 Sum_probs=25.5
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNV 47 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 47 (69)
|..|++.|..|+.+|.++...+.. ++. + ..++..|+.++
T Consensus 32 A~~L~~~G~~ViaIDi~~~aV~~a----~~~-~--~~~v~dDlf~p 70 (134)
T PRK04148 32 AKKLKESGFDVIVIDINEKAVEKA----KKL-G--LNAFVDDLFNP 70 (134)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHH----HHh-C--CeEEECcCCCC
Confidence 678889999999999987643332 222 2 34556666553
No 267
>KOG2865|consensus
Probab=93.37 E-value=0.24 Score=30.06 Aligned_cols=50 Identities=14% Similarity=0.084 Sum_probs=35.1
Q ss_pred HHHHHHcCCeEEEeecC-cchHHHHHHHHHhhCC--CceeEEEccCCCHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQ-KDLNEETVQMVNQVAP--GAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+..|++.|-.|++=.|- +..... ++-. | .++.++..|+.|++++..+++.
T Consensus 78 vnklak~GSQviiPyR~d~~~~r~----lkvm-GdLGQvl~~~fd~~DedSIr~vvk~ 130 (391)
T KOG2865|consen 78 VNKLAKMGSQVIIPYRGDEYDPRH----LKVM-GDLGQVLFMKFDLRDEDSIRAVVKH 130 (391)
T ss_pred HHHHhhcCCeEEEeccCCccchhh----eeec-ccccceeeeccCCCCHHHHHHHHHh
Confidence 56899999999985443 222221 2212 2 4788999999999999998754
No 268
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=92.79 E-value=0.41 Score=27.19 Aligned_cols=24 Identities=25% Similarity=0.180 Sum_probs=19.8
Q ss_pred HHHHHHcCCeEEEeecCcchHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
+..|+++|++|+.++.++...+.+
T Consensus 49 a~~LA~~G~~V~gvD~S~~Ai~~~ 72 (213)
T TIGR03840 49 LAWLAEQGHRVLGVELSEIAVEQF 72 (213)
T ss_pred HHHHHhCCCeEEEEeCCHHHHHHH
Confidence 578999999999999987766653
No 269
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=92.39 E-value=0.24 Score=25.97 Aligned_cols=20 Identities=25% Similarity=0.456 Sum_probs=16.9
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
+|++|++.|+.|+++|.++.
T Consensus 28 VA~~L~e~g~dv~atDI~~~ 47 (129)
T COG1255 28 VAKRLAERGFDVLATDINEK 47 (129)
T ss_pred HHHHHHHcCCcEEEEecccc
Confidence 37889999999999998755
No 270
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=92.05 E-value=0.27 Score=27.13 Aligned_cols=29 Identities=24% Similarity=0.304 Sum_probs=21.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMV 29 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~ 29 (69)
||..|+..|++|.+++.+.+.++...+.+
T Consensus 14 iA~~~a~~G~~V~l~d~~~~~l~~~~~~i 42 (180)
T PF02737_consen 14 IAALFARAGYEVTLYDRSPEALERARKRI 42 (180)
T ss_dssp HHHHHHHTTSEEEEE-SSHHHHHHHHHHH
T ss_pred HHHHHHhCCCcEEEEECChHHHHhhhhHH
Confidence 46788999999999999877665544444
No 271
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=91.79 E-value=0.31 Score=28.23 Aligned_cols=45 Identities=13% Similarity=-0.011 Sum_probs=29.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+++.|++.|++|.+..|+.+... . ..+....+|+.|++++..+++
T Consensus 15 vv~~L~~~g~~V~~~~R~~~~~~-------~---~~~~~~~~d~~d~~~l~~a~~ 59 (285)
T TIGR03649 15 IARLLQAASVPFLVASRSSSSSA-------G---PNEKHVKFDWLDEDTWDNPFS 59 (285)
T ss_pred HHHHHHhCCCcEEEEeCCCcccc-------C---CCCccccccCCCHHHHHHHHh
Confidence 36788999999988888754321 0 123344567777777776653
No 272
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=91.20 E-value=0.53 Score=30.23 Aligned_cols=44 Identities=9% Similarity=0.136 Sum_probs=27.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVD 51 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 51 (69)
+++.|.++|.+|++.+.++++.++.. +. + ...+.+|.++++..+
T Consensus 432 la~~L~~~g~~vvvId~d~~~~~~~~----~~-g--~~~i~GD~~~~~~L~ 475 (558)
T PRK10669 432 LGEKLLAAGIPLVVIETSRTRVDELR----ER-G--IRAVLGNAANEEIMQ 475 (558)
T ss_pred HHHHHHHCCCCEEEEECCHHHHHHHH----HC-C--CeEEEcCCCCHHHHH
Confidence 36788889999999998766554432 22 2 334455665554443
No 273
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=91.09 E-value=0.75 Score=24.11 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=23.3
Q ss_pred HHHHHHcCCe-EEEeecCcchHHHHHHHH
Q psy12399 2 ALEFARQGCK-VACAEIQKDLNEETVQMV 29 (69)
Q Consensus 2 a~~la~~G~~-V~~~~~~~~~~~~~~~~~ 29 (69)
+..|++.|++ |.++.|+.++++++.+.+
T Consensus 28 ~~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 28 AAALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp HHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 6788899998 888999888888877776
No 274
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=90.95 E-value=0.9 Score=25.91 Aligned_cols=24 Identities=29% Similarity=0.235 Sum_probs=19.9
Q ss_pred HHHHHHcCCeEEEeecCcchHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
+..|+++|++|+.++.++...+..
T Consensus 52 a~~LA~~G~~V~avD~s~~Ai~~~ 75 (218)
T PRK13255 52 MLWLAEQGHEVLGVELSELAVEQF 75 (218)
T ss_pred HHHHHhCCCeEEEEccCHHHHHHH
Confidence 567999999999999987766654
No 275
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=90.89 E-value=0.4 Score=29.06 Aligned_cols=58 Identities=10% Similarity=0.039 Sum_probs=36.8
Q ss_pred CHHHHHHcCCeEEEeecC-cchHHHHHHHHHhhC---CCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQ-KDLNEETVQMVNQVA---PGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+++.|++.|+.|.-+.|. ........ .+.+.. ..+.....+|++|...+.++++.+.-
T Consensus 18 La~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 18 LAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred HHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 368899999999765432 22111111 222210 23577889999999999999887643
No 276
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=90.85 E-value=0.71 Score=26.65 Aligned_cols=45 Identities=20% Similarity=0.149 Sum_probs=30.5
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHH-------------hhCCCceeEEEccCCCH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVN-------------QVAPGAAKGYYCDVGNV 47 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dv~~~ 47 (69)
+..|+++|++|+.++.++...+...++.. .. +..+.++.+|+-+.
T Consensus 58 ~~~LA~~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~-~~~i~~~~gD~f~l 115 (226)
T PRK13256 58 MLFFLSKGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYK-GDDIEIYVADIFNL 115 (226)
T ss_pred HHHHHhCCCcEEEEecCHHHHHHHHHHcCCCcceecccccceec-cCceEEEEccCcCC
Confidence 46799999999999998777666544320 11 34567777777543
No 277
>KOG0409|consensus
Probab=90.48 E-value=0.38 Score=29.18 Aligned_cols=26 Identities=27% Similarity=0.302 Sum_probs=21.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
|+..|.+.|++|++++|+.++.+++.
T Consensus 50 M~~nLik~G~kVtV~dr~~~k~~~f~ 75 (327)
T KOG0409|consen 50 MVSNLIKAGYKVTVYDRTKDKCKEFQ 75 (327)
T ss_pred HHHHHHHcCCEEEEEeCcHHHHHHHH
Confidence 57889999999999999877665544
No 278
>KOG2304|consensus
Probab=90.45 E-value=0.58 Score=27.57 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=24.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQ 31 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~ 31 (69)
||+--+..|.+|.++++++..+.+..+.+.+
T Consensus 26 IAQv~a~sg~~V~l~d~~~~aL~~A~~~I~~ 56 (298)
T KOG2304|consen 26 IAQVAATSGLNVWLVDANEDALSRATKAISS 56 (298)
T ss_pred HHHHHHhcCCceEEecCCHHHHHHHHHHHHH
Confidence 5677788999999999998887776666643
No 279
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=90.45 E-value=0.58 Score=28.64 Aligned_cols=21 Identities=43% Similarity=0.634 Sum_probs=17.6
Q ss_pred CHHHHHHcCCeEEEeecCcch
Q psy12399 1 MALEFARQGCKVACAEIQKDL 21 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~ 21 (69)
||++|+++|+.|++++++.+.
T Consensus 35 MArnLlkAGheV~V~Drnrsa 55 (341)
T TIGR01724 35 MAIEFAMAGHDVVLAEPNREF 55 (341)
T ss_pred HHHHHHHCCCEEEEEeCChhh
Confidence 588999999999999887553
No 280
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=90.31 E-value=2.1 Score=24.25 Aligned_cols=49 Identities=10% Similarity=0.129 Sum_probs=32.8
Q ss_pred HHHHHHcCCeEEEee---cC-cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAE---IQ-KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRI 54 (69)
Q Consensus 2 a~~la~~G~~V~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v 54 (69)
++.+++.|++++..| |. +..+.++...+++. + ..+-.|+++.++...+.
T Consensus 57 v~~l~~aGadIIAlDaT~R~Rp~~l~~li~~i~~~-~---~l~MADist~ee~~~A~ 109 (192)
T PF04131_consen 57 VDALAEAGADIIALDATDRPRPETLEELIREIKEK-Y---QLVMADISTLEEAINAA 109 (192)
T ss_dssp HHHHHHCT-SEEEEE-SSSS-SS-HHHHHHHHHHC-T---SEEEEE-SSHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecCCCCCCcCHHHHHHHHHHh-C---cEEeeecCCHHHHHHHH
Confidence 467899999988754 32 23467777777766 3 56788999988876653
No 281
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=90.28 E-value=2.8 Score=26.37 Aligned_cols=53 Identities=8% Similarity=-0.056 Sum_probs=36.1
Q ss_pred HHHHHHcCCeEEEeecC---cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQ---KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+..|++.|++++++|.. .....+..+.++.. -.....+..|++..+....+++
T Consensus 158 v~~lv~aGvDvI~iD~a~g~~~~~~~~v~~ik~~-~p~~~vi~g~V~T~e~a~~l~~ 213 (404)
T PRK06843 158 VEELVKAHVDILVIDSAHGHSTRIIELVKKIKTK-YPNLDLIAGNIVTKEAALDLIS 213 (404)
T ss_pred HHHHHhcCCCEEEEECCCCCChhHHHHHHHHHhh-CCCCcEEEEecCCHHHHHHHHH
Confidence 56788899998876543 23455566666655 3345566779999888888765
No 282
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=90.26 E-value=0.53 Score=27.84 Aligned_cols=26 Identities=27% Similarity=0.267 Sum_probs=21.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
||..|+..|+.|.+++++.+.++...
T Consensus 20 iA~~~a~~G~~V~l~d~~~~~~~~~~ 45 (286)
T PRK07819 20 IAEVCARAGVDVLVFETTEELATAGR 45 (286)
T ss_pred HHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 57889999999999999877665533
No 283
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=90.02 E-value=1.4 Score=27.30 Aligned_cols=46 Identities=15% Similarity=0.103 Sum_probs=27.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVD 51 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 51 (69)
+++.|.+.|..|++.+++++..+..... +.....+.+|.++++...
T Consensus 246 l~~~L~~~~~~v~vid~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~L~ 291 (453)
T PRK09496 246 LAKLLEKEGYSVKLIERDPERAEELAEE-----LPNTLVLHGDGTDQELLE 291 (453)
T ss_pred HHHHHHhCCCeEEEEECCHHHHHHHHHH-----CCCCeEEECCCCCHHHHH
Confidence 3577888899999888876554443322 223344556666655443
No 284
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=89.96 E-value=0.43 Score=26.81 Aligned_cols=28 Identities=18% Similarity=0.393 Sum_probs=21.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQM 28 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~ 28 (69)
+++.|.+.|++|++++++.++.+...+.
T Consensus 43 ~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 43 LAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred HHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 4788999999999988876665555444
No 285
>PRK05865 hypothetical protein; Provisional
Probab=89.79 E-value=1.2 Score=30.57 Aligned_cols=46 Identities=15% Similarity=0.170 Sum_probs=32.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|+++|++|++++++.... . ...+.++.+|+++.+++..+++.
T Consensus 16 La~~Ll~~G~~Vv~l~R~~~~~------~----~~~v~~v~gDL~D~~~l~~al~~ 61 (854)
T PRK05865 16 LTARLLSQGHEVVGIARHRPDS------W----PSSADFIAADIRDATAVESAMTG 61 (854)
T ss_pred HHHHHHHCcCEEEEEECCchhh------c----ccCceEEEeeCCCHHHHHHHHhC
Confidence 3678899999998887753210 1 22466788999999988887653
No 286
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models.
Probab=89.71 E-value=2.7 Score=26.57 Aligned_cols=53 Identities=9% Similarity=0.094 Sum_probs=35.6
Q ss_pred HHHHHHcCCeEEEeec---CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEI---QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+..|.+.|++++.++. +.....+..+.+++. ...+.....++.+.++.+.+++
T Consensus 229 ~~~L~~aG~d~I~vd~a~g~~~~~~~~i~~i~~~-~~~~~vi~G~v~t~~~a~~l~~ 284 (450)
T TIGR01302 229 AEALVKAGVDVIVIDSSHGHSIYVIDSIKEIKKT-YPDLDIIAGNVATAEQAKALID 284 (450)
T ss_pred HHHHHHhCCCEEEEECCCCcHhHHHHHHHHHHHh-CCCCCEEEEeCCCHHHHHHHHH
Confidence 4577888999877655 334455556666655 2345556678888888888765
No 287
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=89.66 E-value=3.4 Score=26.58 Aligned_cols=53 Identities=11% Similarity=0.045 Sum_probs=34.8
Q ss_pred HHHHHHcCCeEEEeec---CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEI---QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+..|.+.|++++.++. +.....+..+.+++. ...+.....++.+.++...+++
T Consensus 246 ~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~-~~~~~v~aG~V~t~~~a~~~~~ 301 (495)
T PTZ00314 246 AAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSN-YPHVDIIAGNVVTADQAKNLID 301 (495)
T ss_pred HHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhh-CCCceEEECCcCCHHHHHHHHH
Confidence 5678899999877654 222333456666655 2345566678888888887764
No 288
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=89.36 E-value=2.7 Score=27.07 Aligned_cols=27 Identities=26% Similarity=0.388 Sum_probs=22.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQ 27 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~ 27 (69)
||+.|+++|.+|.+++|+.++.+++.+
T Consensus 21 mA~nL~~~G~~V~V~NRt~~k~~~l~~ 47 (493)
T PLN02350 21 LALNIAEKGFPISVYNRTTSKVDETVE 47 (493)
T ss_pred HHHHHHhCCCeEEEECCCHHHHHHHHH
Confidence 578999999999999998777666554
No 289
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=89.21 E-value=1.2 Score=27.67 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=21.3
Q ss_pred CHHHHHHcCCeEEEeecCc-chHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQK-DLNEETVQMVNQ 31 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~-~~~~~~~~~~~~ 31 (69)
+|+.|++.|++|.+++++. +..++...++..
T Consensus 20 ~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~ 51 (450)
T PRK14106 20 LAKFLKKLGAKVILTDEKEEDQLKEALEELGE 51 (450)
T ss_pred HHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh
Confidence 4789999999999988764 334444444443
No 290
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=89.16 E-value=1.6 Score=24.25 Aligned_cols=27 Identities=15% Similarity=0.150 Sum_probs=19.4
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQM 28 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~ 28 (69)
+..+++.|++|+.+|.++...+...+.
T Consensus 45 a~~la~~g~~V~~iD~s~~~l~~a~~~ 71 (195)
T TIGR00477 45 SLYLSLAGYDVRAWDHNPASIASVLDM 71 (195)
T ss_pred HHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence 467888999999999886655544433
No 291
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=88.76 E-value=3.2 Score=24.19 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=20.1
Q ss_pred CHHHHHHcCCeEEEeecCcch-HHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDL-NEETVQMV 29 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~-~~~~~~~~ 29 (69)
+|-.|+++|.+|.+.|-++++ +.++.+..
T Consensus 22 LAs~la~~G~~V~lIDaDpn~pl~~W~~~a 51 (231)
T PF07015_consen 22 LASELAARGARVALIDADPNQPLAKWAENA 51 (231)
T ss_pred HHHHHHHCCCeEEEEeCCCCCcHHHHHHhc
Confidence 366789999999998776554 45554433
No 292
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=88.68 E-value=3.5 Score=26.61 Aligned_cols=53 Identities=9% Similarity=0.013 Sum_probs=35.0
Q ss_pred HHHHHHcCCeEEEeecCcch-HH--HHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDL-NE--ETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
++.|.+.|++++++|..... .. +..++++.. ......+..|++..++...+++
T Consensus 253 ~~~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~-~p~~~vi~g~v~t~e~a~~a~~ 308 (505)
T PLN02274 253 LEHLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKT-YPELDVIGGNVVTMYQAQNLIQ 308 (505)
T ss_pred HHHHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHh-CCCCcEEEecCCCHHHHHHHHH
Confidence 56788899998887764322 22 456666655 2345566778888888777664
No 293
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=88.32 E-value=4.5 Score=25.98 Aligned_cols=53 Identities=11% Similarity=0.074 Sum_probs=38.8
Q ss_pred HHHHHHcCCeEEEeecC---cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQ---KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+..|.++|++++++|.. .....+..+.+++. ...+..+..|+...+....+++
T Consensus 232 a~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~-~p~~~v~agnv~t~~~a~~l~~ 287 (479)
T PRK07807 232 ARALLEAGVDVLVVDTAHGHQEKMLEALRAVRAL-DPGVPIVAGNVVTAEGTRDLVE 287 (479)
T ss_pred HHHHHHhCCCEEEEeccCCccHHHHHHHHHHHHH-CCCCeEEeeccCCHHHHHHHHH
Confidence 56788999998776542 33456667777766 4457777889999999888875
No 294
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=88.22 E-value=1.6 Score=27.22 Aligned_cols=45 Identities=18% Similarity=0.079 Sum_probs=30.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
+|+.|+++|++|++++++.+ .. . .. ....+|+++.+++.+.+.+.
T Consensus 220 iA~~l~~~Ga~V~~v~~~~~-~~--------~-~~--~~~~~dv~~~~~~~~~v~~~ 264 (399)
T PRK05579 220 LARAAARRGADVTLVSGPVN-LP--------T-PA--GVKRIDVESAQEMLDAVLAA 264 (399)
T ss_pred HHHHHHHCCCEEEEeCCCcc-cc--------C-CC--CcEEEccCCHHHHHHHHHHh
Confidence 47899999999988776532 11 1 11 12467999999988877643
No 295
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=88.04 E-value=2.6 Score=24.88 Aligned_cols=30 Identities=20% Similarity=0.302 Sum_probs=21.5
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHh
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQ 31 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~ 31 (69)
+..|++.|++|+.+|.++...+.+.+....
T Consensus 135 ~~~la~~g~~V~avD~s~~ai~~~~~~~~~ 164 (287)
T PRK12335 135 SLYLALLGFDVTAVDINQQSLENLQEIAEK 164 (287)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence 457888999999999887666555544443
No 296
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]
Probab=87.43 E-value=2.6 Score=24.05 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=31.4
Q ss_pred HHHHHcCCe-EEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHH
Q psy12399 3 LEFARQGCK-VACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVD 48 (69)
Q Consensus 3 ~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 48 (69)
...+..|++ |+.++.+.+..+-..+-..+. ..++.++.+|+++..
T Consensus 61 ~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l-~g~v~f~~~dv~~~~ 106 (198)
T COG2263 61 IGAALLGASRVLAVDIDPEALEIARANAEEL-LGDVEFVVADVSDFR 106 (198)
T ss_pred HHHHhcCCcEEEEEecCHHHHHHHHHHHHhh-CCceEEEEcchhhcC
Confidence 344567865 777888877666666655555 678999999987643
No 297
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=87.33 E-value=0.96 Score=26.58 Aligned_cols=26 Identities=23% Similarity=0.358 Sum_probs=20.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
+|..|++.|++|++++++++..+...
T Consensus 16 iA~~la~~G~~V~~~d~~~~~~~~~~ 41 (288)
T PRK09260 16 IAYVFAVSGFQTTLVDIKQEQLESAQ 41 (288)
T ss_pred HHHHHHhCCCcEEEEeCCHHHHHHHH
Confidence 47789999999999999877666544
No 298
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=87.32 E-value=0.67 Score=28.61 Aligned_cols=50 Identities=16% Similarity=0.047 Sum_probs=37.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+|++|+++|-+-++.+|+..++..+.+.+ |..+..+++.+ +..++++.+.
T Consensus 22 vae~l~~~g~~~aLAgRs~~kl~~l~~~L----G~~~~~~p~~~--p~~~~~~~~~ 71 (382)
T COG3268 22 VAEYLAREGLTAALAGRSSAKLDALRASL----GPEAAVFPLGV--PAALEAMASR 71 (382)
T ss_pred HHHHHHHcCCchhhccCCHHHHHHHHHhc----CccccccCCCC--HHHHHHHHhc
Confidence 47899999999888999988888776666 65566665554 6666665544
No 299
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=87.19 E-value=2.1 Score=26.45 Aligned_cols=54 Identities=9% Similarity=0.028 Sum_probs=33.9
Q ss_pred HHHHHHcCCeEEEeecC---cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQ---KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+..|.+.|+++++++.. .+..-+....+++. ..++..+..++...+..+.+++.
T Consensus 113 ~~~L~~agvD~ivID~a~g~s~~~~~~ik~ik~~-~~~~~viaGNV~T~e~a~~L~~a 169 (352)
T PF00478_consen 113 AEALVEAGVDVIVIDSAHGHSEHVIDMIKKIKKK-FPDVPVIAGNVVTYEGAKDLIDA 169 (352)
T ss_dssp HHHHHHTT-SEEEEE-SSTTSHHHHHHHHHHHHH-STTSEEEEEEE-SHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEccccCccHHHHHHHHHHHHHh-CCCceEEecccCCHHHHHHHHHc
Confidence 45678888888776532 23344455666665 34677778888888888887654
No 300
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=86.94 E-value=1.2 Score=26.26 Aligned_cols=26 Identities=23% Similarity=0.216 Sum_probs=20.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
|+..|+.+|.+|.+++++.+..+...
T Consensus 19 iA~~la~~G~~V~l~d~~~~~~~~~~ 44 (292)
T PRK07530 19 IAHVCALAGYDVLLNDVSADRLEAGL 44 (292)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 47789999999999999876655533
No 301
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=86.92 E-value=3.2 Score=23.11 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=20.6
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVN 30 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~ 30 (69)
+..|++.|++|+.++.++...+...+...
T Consensus 45 a~~La~~g~~V~gvD~S~~~i~~a~~~~~ 73 (197)
T PRK11207 45 SLYLAANGFDVTAWDKNPMSIANLERIKA 73 (197)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46788999999999987765555444433
No 302
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=86.83 E-value=2.8 Score=25.15 Aligned_cols=55 Identities=15% Similarity=0.087 Sum_probs=32.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHH--HhhC-----CCceeEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMV--NQVA-----PGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
||.+|.++|+.|.+++|+.++..+..... .... -...-++-.=|.+.+++.+.+.
T Consensus 15 mA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~ 76 (286)
T COG2084 15 MAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLF 76 (286)
T ss_pred HHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHh
Confidence 57899999999999999877633322221 0000 0112233334577788877663
No 303
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=86.81 E-value=3.5 Score=22.34 Aligned_cols=58 Identities=17% Similarity=0.079 Sum_probs=34.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeE-EEccCCCHHHHHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKG-YYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+++.|...|+.|+.........+...+.+++ ...+.. -..+-...+.+..+++.+.+.
T Consensus 32 ia~~l~d~GfeVi~~g~~~tp~e~v~aA~~~--dv~vIgvSsl~g~h~~l~~~lve~lre~ 90 (143)
T COG2185 32 IARALADAGFEVINLGLFQTPEEAVRAAVEE--DVDVIGVSSLDGGHLTLVPGLVEALREA 90 (143)
T ss_pred HHHHHHhCCceEEecCCcCCHHHHHHHHHhc--CCCEEEEEeccchHHHHHHHHHHHHHHh
Confidence 4678888999998765433322333333333 344433 344666677777777777654
No 304
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=86.78 E-value=4.4 Score=23.51 Aligned_cols=49 Identities=10% Similarity=0.009 Sum_probs=29.8
Q ss_pred HHHHHHcCCeEEEe---ecCcch--HHHHHHHHHhhCCCceeEEEccCCCHHHHHHHH
Q psy12399 2 ALEFARQGCKVACA---EIQKDL--NEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRI 54 (69)
Q Consensus 2 a~~la~~G~~V~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v 54 (69)
+..|++.|+.|+.. .|..+. .+++.... ...-..+-.|.++.++...+.
T Consensus 91 Vd~L~~~Ga~IIA~DaT~R~RP~~~~~~~i~~~----k~~~~l~MAD~St~ee~l~a~ 144 (229)
T COG3010 91 VDALAEAGADIIAFDATDRPRPDGDLEELIARI----KYPGQLAMADCSTFEEGLNAH 144 (229)
T ss_pred HHHHHHCCCcEEEeecccCCCCcchHHHHHHHh----hcCCcEEEeccCCHHHHHHHH
Confidence 46789999999875 344443 33333331 222335677999888776643
No 305
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=86.74 E-value=2.7 Score=21.11 Aligned_cols=56 Identities=14% Similarity=0.029 Sum_probs=36.5
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEc-cCCCHHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYC-DVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~~~~~~~~~v~~~~~ 59 (69)
+..|-++|++|.+.+.+.+. +++.+.+.+. ..++..+.+ -..+.....++++.+.+
T Consensus 21 a~~l~~~G~~v~~~d~~~~~-~~l~~~~~~~-~pd~V~iS~~~~~~~~~~~~l~~~~k~ 77 (121)
T PF02310_consen 21 AAYLRKAGHEVDILDANVPP-EELVEALRAE-RPDVVGISVSMTPNLPEAKRLARAIKE 77 (121)
T ss_dssp HHHHHHTTBEEEEEESSB-H-HHHHHHHHHT-TCSEEEEEESSSTHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCeEEEECCCCCH-HHHHHHHhcC-CCcEEEEEccCcCcHHHHHHHHHHHHh
Confidence 34556679999887665432 5555666555 567777777 56666777777777544
No 306
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=86.72 E-value=5.7 Score=24.77 Aligned_cols=55 Identities=16% Similarity=0.224 Sum_probs=36.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
|.+.|+++||+|+++-.+.. .++ +.+. ..+..++.---+|++.++..+..+.+-.
T Consensus 193 Ilr~L~~rg~~vtVVP~~t~-~ee----Il~~-~pDGiflSNGPGDP~~~~~~i~~ik~l~ 247 (368)
T COG0505 193 ILRELVKRGCRVTVVPADTS-AEE----ILAL-NPDGIFLSNGPGDPAPLDYAIETIKELL 247 (368)
T ss_pred HHHHHHHCCCeEEEEcCCCC-HHH----HHhh-CCCEEEEeCCCCChhHHHHHHHHHHHHh
Confidence 46889999999988643322 222 2222 4567788777888888888887766543
No 307
>PRK09287 6-phosphogluconate dehydrogenase; Validated
Probab=86.53 E-value=0.85 Score=28.97 Aligned_cols=27 Identities=26% Similarity=0.359 Sum_probs=22.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQ 27 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~ 27 (69)
||+.|+++|++|.+++|+.++.+++.+
T Consensus 5 mA~nL~~~G~~V~v~nrt~~~~~~l~~ 31 (459)
T PRK09287 5 LALNIASHGYTVAVYNRTPEKTDEFLA 31 (459)
T ss_pred HHHHHHhCCCeEEEECCCHHHHHHHHH
Confidence 578999999999999998777766655
No 308
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=86.51 E-value=1.1 Score=28.67 Aligned_cols=25 Identities=20% Similarity=0.185 Sum_probs=20.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
||..|+..|+.|.+++++.+.++..
T Consensus 20 IA~~la~aG~~V~l~d~~~e~l~~~ 44 (503)
T TIGR02279 20 IAQVAASAGHQVLLYDIRAEALARA 44 (503)
T ss_pred HHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 5788999999999999987776553
No 309
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=86.17 E-value=1.2 Score=28.53 Aligned_cols=25 Identities=16% Similarity=0.121 Sum_probs=21.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
||..|+..|+.|++++++.+.++..
T Consensus 22 IA~~la~aG~~V~l~D~~~e~l~~~ 46 (507)
T PRK08268 22 IAQVAAQAGHTVLLYDARAGAAAAA 46 (507)
T ss_pred HHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 5788999999999999988776654
No 310
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=86.14 E-value=4.6 Score=23.06 Aligned_cols=53 Identities=11% Similarity=0.084 Sum_probs=31.1
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
++.|.+.|.+++=+..+.+...+..+.+.+. ..++..-..-|.+.++.+.+++
T Consensus 26 ~~al~~~Gi~~iEit~~t~~a~~~i~~l~~~-~~~~~vGAGTVl~~~~a~~a~~ 78 (204)
T TIGR01182 26 AKALIEGGLRVLEVTLRTPVALDAIRLLRKE-VPDALIGAGTVLNPEQLRQAVD 78 (204)
T ss_pred HHHHHHcCCCEEEEeCCCccHHHHHHHHHHH-CCCCEEEEEeCCCHHHHHHHHH
Confidence 5677788887654333334445555555544 2345555666777777776553
No 311
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=85.95 E-value=5.3 Score=23.60 Aligned_cols=47 Identities=15% Similarity=0.138 Sum_probs=27.7
Q ss_pred CHHHHHHcC--CeEEEeecCcchH---HHHHHHHHhhC------C-CceeEEEccCCCH
Q psy12399 1 MALEFARQG--CKVACAEIQKDLN---EETVQMVNQVA------P-GAAKGYYCDVGNV 47 (69)
Q Consensus 1 ia~~la~~G--~~V~~~~~~~~~~---~~~~~~~~~~~------~-~~~~~~~~Dv~~~ 47 (69)
+++.|+++| ++|++..|+.+.. +.+.+.+.... . .++.++.+|++++
T Consensus 15 l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 73 (367)
T TIGR01746 15 LLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEP 73 (367)
T ss_pred HHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcc
Confidence 467888998 7788877765422 22222222110 0 3577889998764
No 312
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=85.89 E-value=1.5 Score=26.66 Aligned_cols=24 Identities=8% Similarity=0.010 Sum_probs=19.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~ 24 (69)
||..|+..|++|.+++++.+..+.
T Consensus 22 iA~~~a~aG~~V~l~D~~~~~~~~ 45 (321)
T PRK07066 22 WVARALAHGLDVVAWDPAPGAEAA 45 (321)
T ss_pred HHHHHHhCCCeEEEEeCCHHHHHH
Confidence 477899999999999987665444
No 313
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=85.83 E-value=1.4 Score=25.92 Aligned_cols=25 Identities=24% Similarity=0.501 Sum_probs=19.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
|+..|+..|.+|++++++.+..+..
T Consensus 18 iA~~la~~G~~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 18 IAQVFARTGYDVTIVDVSEEILKNA 42 (291)
T ss_pred HHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 4678899999999999887765543
No 314
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=85.81 E-value=2.6 Score=25.68 Aligned_cols=47 Identities=9% Similarity=0.046 Sum_probs=26.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRI 54 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v 54 (69)
+++.|.++|++|+.+++..... +... .....++.+|+++.+++..++
T Consensus 37 l~~~L~~~G~~V~~v~r~~~~~------~~~~-~~~~~~~~~Dl~d~~~~~~~~ 83 (370)
T PLN02695 37 IARRLKAEGHYIIASDWKKNEH------MSED-MFCHEFHLVDLRVMENCLKVT 83 (370)
T ss_pred HHHHHHhCCCEEEEEEeccccc------cccc-cccceEEECCCCCHHHHHHHH
Confidence 4678889999998877643210 0000 111334566777666655544
No 315
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=85.26 E-value=1.6 Score=25.73 Aligned_cols=24 Identities=17% Similarity=0.008 Sum_probs=19.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~ 24 (69)
||..|+..|.+|++++++.+..+.
T Consensus 19 iA~~l~~~G~~V~~~d~~~~~~~~ 42 (295)
T PLN02545 19 IAQLAAAAGMDVWLLDSDPAALSR 42 (295)
T ss_pred HHHHHHhcCCeEEEEeCCHHHHHH
Confidence 578899999999999987766543
No 316
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=85.07 E-value=2.2 Score=24.59 Aligned_cols=18 Identities=11% Similarity=0.200 Sum_probs=14.1
Q ss_pred CHHHHHHcCCeEEEeecC
Q psy12399 1 MALEFARQGCKVACAEIQ 18 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~ 18 (69)
+++.|.++|++|+++.|.
T Consensus 15 l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 15 LVQQLSPEGRVVVALTSS 32 (287)
T ss_pred HHHHHHhcCCEEEEeCCc
Confidence 467888999999877664
No 317
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=84.80 E-value=1.7 Score=25.41 Aligned_cols=30 Identities=23% Similarity=0.321 Sum_probs=22.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVN 30 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~ 30 (69)
++..|++.|++|.+++|+.++.+++.+.+.
T Consensus 132 ia~~L~~~g~~v~v~~R~~~~~~~la~~~~ 161 (270)
T TIGR00507 132 VALPLLKADCNVIIANRTVSKAEELAERFQ 161 (270)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 367788899999888888777776666654
No 318
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=84.78 E-value=1.8 Score=25.45 Aligned_cols=27 Identities=22% Similarity=0.311 Sum_probs=20.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQ 27 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~ 27 (69)
+|..|+..|.+|.+++++.+..+...+
T Consensus 18 iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (287)
T PRK08293 18 IAFQTAFHGFDVTIYDISDEALEKAKE 44 (287)
T ss_pred HHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 467889999999999988765555443
No 319
>PF01591 6PF2K: 6-phosphofructo-2-kinase; InterPro: IPR013079 6-Phosphofructo-2-kinase (2.7.1.105 from EC, 3.1.3.46 from EC) is a bifunctional enzyme that catalyses both the synthesis and the degradation of fructose-2, 6-bisphosphate. The fructose-2,6-bisphosphatase reaction involves a phosphohistidine intermediate. The catalytic pathway is: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate D-fructose 2,6-bisphosphate + H2O = 6-fructose 6-phosphate + Pi The enzyme is important in the regulation of hepatic carbohydrate metabolism and is found in greatest quantities in the liver, kidney and heart. In mammals, several genes often encode different isoforms, each of which differs in its tissue distribution and enzymatic activity []. The family described here bears a resemblance to the ATP-driven phospho-fructokinases, however, they share little sequence similarity, although a few residues seem key to their interaction with fructose 6-phosphate []. This domain forms the N-terminal region of this enzyme, while IPR013078 from INTERPRO forms the C-terminal domain.; GO: 0003873 6-phosphofructo-2-kinase activity, 0005524 ATP binding, 0006000 fructose metabolic process; PDB: 2DWO_A 3QPW_A 3QPV_A 3QPU_A 2I1V_B 2DWP_A 2AXN_A 1K6M_B 3BIF_A 2BIF_A ....
Probab=84.71 E-value=5.1 Score=23.14 Aligned_cols=64 Identities=9% Similarity=-0.012 Sum_probs=35.3
Q ss_pred HHHHcCCeEEEeecC---cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhhcccCCC
Q psy12399 4 EFARQGCKVACAEIQ---KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKILSYCTPR 68 (69)
Q Consensus 4 ~la~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~~~~ 68 (69)
.|.+.|..|++.|-. .++-+.+.+.+.+. +.++.++.+=.+|++-+..=+........+|.|..
T Consensus 90 ~l~~~~G~VAI~DATN~T~~RR~~l~~~~~~~-~~~vlFIEsic~D~~ii~~NI~~~~~~spDY~~~~ 156 (222)
T PF01591_consen 90 WLQEEGGQVAIFDATNSTRERRKMLVERFKEH-GIKVLFIESICDDPEIIERNIREKKQNSPDYKGMD 156 (222)
T ss_dssp HHHTS--SEEEEES---SHHHHHHHHHHHHHT-T-EEEEEEEE---HHHHHHHHHHHHTTSGGGTTS-
T ss_pred HHhcCCCeEEEEeCCCCCHHHHHHHHHHHHHc-CCcEEEEEEEeCCHHHHHHHHHHHHcCCcccccCC
Confidence 445578899887532 23345566666666 77788887777777777766666554445565543
No 320
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=84.70 E-value=4.4 Score=24.23 Aligned_cols=49 Identities=10% Similarity=0.095 Sum_probs=28.4
Q ss_pred CHHHHHHc-CCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCC-CHHHHHHHHH
Q psy12399 1 MALEFARQ-GCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVG-NVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~v~ 55 (69)
+++.|++. |++|+.++++..... .+.. ...+.++.+|++ +.+.+..+++
T Consensus 17 l~~~L~~~~~~~V~~~~r~~~~~~----~~~~--~~~~~~~~~Dl~~~~~~~~~~~~ 67 (347)
T PRK11908 17 LSKRILETTDWEVYGMDMQTDRLG----DLVN--HPRMHFFEGDITINKEWIEYHVK 67 (347)
T ss_pred HHHHHHhCCCCeEEEEeCcHHHHH----Hhcc--CCCeEEEeCCCCCCHHHHHHHHc
Confidence 35677775 689988876543221 1111 124667788987 5555555443
No 321
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=84.58 E-value=2.5 Score=27.71 Aligned_cols=44 Identities=11% Similarity=0.095 Sum_probs=28.0
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDL 52 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~ 52 (69)
++.|.++|.++++.+.+++..+.. ++. + ...+.+|.++++..++
T Consensus 416 a~~L~~~g~~vvvID~d~~~v~~~----~~~-g--~~v~~GDat~~~~L~~ 459 (601)
T PRK03659 416 GRLLMANKMRITVLERDISAVNLM----RKY-G--YKVYYGDATQLELLRA 459 (601)
T ss_pred HHHHHhCCCCEEEEECCHHHHHHH----HhC-C--CeEEEeeCCCHHHHHh
Confidence 567888899999998876654433 322 3 3345667776655543
No 322
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=84.56 E-value=2.9 Score=24.61 Aligned_cols=14 Identities=14% Similarity=0.299 Sum_probs=6.6
Q ss_pred HHHHHcCCeEEEee
Q psy12399 3 LEFARQGCKVACAE 16 (69)
Q Consensus 3 ~~la~~G~~V~~~~ 16 (69)
+.|.+.|+.|+.++
T Consensus 18 ~~l~~~~~~v~~~~ 31 (286)
T PF04321_consen 18 RALKERGYEVIATS 31 (286)
T ss_dssp HHHTTTSEEEEEES
T ss_pred HHHhhCCCEEEEeC
Confidence 34444555555443
No 323
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=84.37 E-value=1.8 Score=25.75 Aligned_cols=24 Identities=25% Similarity=0.291 Sum_probs=19.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~ 24 (69)
++..|++.|.+|++++++++..+.
T Consensus 17 iA~~la~~G~~V~v~d~~~~~~~~ 40 (308)
T PRK06129 17 WAIVFARAGHEVRLWDADPAAAAA 40 (308)
T ss_pred HHHHHHHCCCeeEEEeCCHHHHHH
Confidence 477899999999999988665444
No 324
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=84.17 E-value=1.8 Score=25.07 Aligned_cols=20 Identities=15% Similarity=0.202 Sum_probs=15.8
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
++++|.++|++|...++...
T Consensus 16 l~~~L~~~g~~V~~~~r~~~ 35 (314)
T COG0451 16 LVERLLAAGHDVRGLDRLRD 35 (314)
T ss_pred HHHHHHhCCCeEEEEeCCCc
Confidence 46789999999998877543
No 325
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=84.01 E-value=2.5 Score=26.26 Aligned_cols=32 Identities=13% Similarity=0.042 Sum_probs=21.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhh
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQV 32 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~ 32 (69)
+|+.|++.|++|++.+++..........+...
T Consensus 20 ~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~ 51 (447)
T PRK02472 20 AAKLLHKLGANVTVNDGKPFSENPEAQELLEE 51 (447)
T ss_pred HHHHHHHCCCEEEEEcCCCccchhHHHHHHhc
Confidence 36889999999999887653333333444433
No 326
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=83.91 E-value=3.8 Score=23.24 Aligned_cols=48 Identities=15% Similarity=0.098 Sum_probs=32.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+++.|.+.|..|.+..|+.+...... ..+.....|+.+..++...++.
T Consensus 16 ~~~~L~~~~~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~G 63 (275)
T COG0702 16 VVRELLARGHEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAKG 63 (275)
T ss_pred HHHHHHhCCCEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhcc
Confidence 36789999999988888766554432 1255567778877777666544
No 327
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=83.59 E-value=6.6 Score=22.81 Aligned_cols=54 Identities=7% Similarity=0.089 Sum_probs=37.1
Q ss_pred HHHHHHcCCeEEEeec-CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEI-QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 2 a~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
.+.|.+.|+.|+.=++ +.+.... ..... |.....+..-+|.++.+..+|.+..+
T Consensus 173 vk~l~~~~~~vIAEGr~~tP~~Ak---~a~~~-Ga~aVvVGsAITRp~~It~~F~~~ik 227 (229)
T COG3010 173 VKQLSDAGCRVIAEGRYNTPEQAK---KAIEI-GADAVVVGSAITRPEEITQWFVDAIK 227 (229)
T ss_pred HHHHHhCCCeEEeeCCCCCHHHHH---HHHHh-CCeEEEECcccCCHHHHHHHHHHHHh
Confidence 4678889999988443 4443222 22233 77777888889999999988877654
No 328
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=83.54 E-value=1.1 Score=24.96 Aligned_cols=22 Identities=27% Similarity=0.392 Sum_probs=15.9
Q ss_pred HHHHHHcCCeEEEeecCcchHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNE 23 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~ 23 (69)
|..|++.|.+|+.++.+++..+
T Consensus 16 A~~lA~~G~~V~g~D~~~~~v~ 37 (185)
T PF03721_consen 16 AAALAEKGHQVIGVDIDEEKVE 37 (185)
T ss_dssp HHHHHHTTSEEEEE-S-HHHHH
T ss_pred HHHHHhCCCEEEEEeCChHHHH
Confidence 6789999999999988765433
No 329
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.42 E-value=5 Score=21.28 Aligned_cols=53 Identities=8% Similarity=-0.162 Sum_probs=29.5
Q ss_pred HHHHHcCCeEEEeecC------cchHHHHHHHHHhhCCCceeEEEcc--CCCHHHHHHHHHH
Q psy12399 3 LEFARQGCKVACAEIQ------KDLNEETVQMVNQVAPGAAKGYYCD--VGNVDSVDLRIGL 56 (69)
Q Consensus 3 ~~la~~G~~V~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~D--v~~~~~~~~~v~~ 56 (69)
..++..|.+-++..|. .+..+...+..+.. |....++++- --.+++++.+.+.
T Consensus 22 ~~iaa~GFksiI~nRPDgEe~~QP~~~~i~~aa~~a-Gl~y~~iPV~~~~iT~~dV~~f~~A 82 (130)
T COG3453 22 ASIAALGFKSIICNRPDGEEPGQPGFAAIAAAAEAA-GLTYTHIPVTGGGITEADVEAFQRA 82 (130)
T ss_pred HHHHHhccceecccCCCCCCCCCCChHHHHHHHHhc-CCceEEeecCCCCCCHHHHHHHHHH
Confidence 4688999998776552 12234455555555 6666665542 1234555544443
No 330
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=83.37 E-value=1.5 Score=27.95 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=22.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQ 27 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~ 27 (69)
+|+.|++.|.+|++++++.++.+.+.+
T Consensus 14 mA~nL~~~G~~V~v~drt~~~~~~l~~ 40 (467)
T TIGR00873 14 LALNMADHGFTVSVYNRTPEKTDEFLA 40 (467)
T ss_pred HHHHHHhcCCeEEEEeCCHHHHHHHHh
Confidence 578999999999999998777666554
No 331
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=82.93 E-value=4.1 Score=19.95 Aligned_cols=43 Identities=16% Similarity=0.195 Sum_probs=29.5
Q ss_pred HHHHHH--cCCeEEEeecCcchHHHHHHHHHhh-CCCceeEEEccC
Q psy12399 2 ALEFAR--QGCKVACAEIQKDLNEETVQMVNQV-APGAAKGYYCDV 44 (69)
Q Consensus 2 a~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv 44 (69)
+..+++ .|++|+.++.++...+...+..... ...++.++..|+
T Consensus 16 ~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~ 61 (112)
T PF12847_consen 16 SIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA 61 (112)
T ss_dssp HHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC
T ss_pred HHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc
Confidence 356677 8899999999877766666666222 135677777777
No 332
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=82.65 E-value=1.8 Score=25.47 Aligned_cols=25 Identities=28% Similarity=0.352 Sum_probs=19.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
+++.|++.|.+|.+++++.++.+.+
T Consensus 11 mA~~L~~~G~~V~v~dr~~~~~~~l 35 (288)
T TIGR01692 11 MAANLLKAGHPVRVFDLFPDAVEEA 35 (288)
T ss_pred HHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 4788899999999998876655443
No 333
>PRK14968 putative methyltransferase; Provisional
Probab=82.60 E-value=5.4 Score=21.45 Aligned_cols=42 Identities=19% Similarity=0.035 Sum_probs=25.5
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCc---eeEEEccC
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGA---AKGYYCDV 44 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv 44 (69)
+..++..|.+|+.++.++...+...+.+... +.. +.++.+|+
T Consensus 38 ~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~d~ 82 (188)
T PRK14968 38 AIVAAKNGKKVVGVDINPYAVECAKCNAKLN-NIRNNGVEVIRSDL 82 (188)
T ss_pred HHHHHhhcceEEEEECCHHHHHHHHHHHHHc-CCCCcceEEEeccc
Confidence 4566777888988898876655555554433 221 44555554
No 334
>PRK07107 inosine 5-monophosphate dehydrogenase; Validated
Probab=82.39 E-value=11 Score=24.47 Aligned_cols=54 Identities=11% Similarity=0.148 Sum_probs=36.1
Q ss_pred HHHHHHcCCeEEEeecCcch---HHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDL---NEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
++.|.+.|.+++.++....- ..+..+.++..++..+.....++...++.+.+++
T Consensus 247 a~~Lv~aGvd~i~vd~a~g~~~~~~~~i~~ir~~~~~~~~V~aGnV~t~e~a~~li~ 303 (502)
T PRK07107 247 VPALVEAGADVLCIDSSEGYSEWQKRTLDWIREKYGDSVKVGAGNVVDREGFRYLAE 303 (502)
T ss_pred HHHHHHhCCCeEeecCcccccHHHHHHHHHHHHhCCCCceEEeccccCHHHHHHHHH
Confidence 56788899998776533221 2345556665434346677888999999888875
No 335
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=82.32 E-value=9.1 Score=23.48 Aligned_cols=53 Identities=15% Similarity=0.094 Sum_probs=31.8
Q ss_pred HHHHHHcCC--eEEEeecC---cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGC--KVACAEIQ---KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~--~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+..|.+.|. +++.+|.. .+...++.+.+++. ...+..+..|+++.+....+.+
T Consensus 102 ~~~Lv~ag~~~d~i~iD~a~gh~~~~~e~I~~ir~~-~p~~~vi~g~V~t~e~a~~l~~ 159 (326)
T PRK05458 102 VDQLAAEGLTPEYITIDIAHGHSDSVINMIQHIKKH-LPETFVIAGNVGTPEAVRELEN 159 (326)
T ss_pred HHHHHhcCCCCCEEEEECCCCchHHHHHHHHHHHhh-CCCCeEEEEecCCHHHHHHHHH
Confidence 456777754 77665443 23455566666655 3345566668887777766654
No 336
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=82.21 E-value=8 Score=22.72 Aligned_cols=52 Identities=6% Similarity=-0.027 Sum_probs=29.7
Q ss_pred HHHHHcCCeE-EEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 3 LEFARQGCKV-ACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 3 ~~la~~G~~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+.+++.|++- ++.+...++..++...+++. +....++..+-+..+.++.+.+
T Consensus 109 ~~~~~aGvdgviipDlp~ee~~~~~~~~~~~-gl~~i~lv~P~T~~eri~~i~~ 161 (256)
T TIGR00262 109 AKCKEVGVDGVLVADLPLEESGDLVEAAKKH-GVKPIFLVAPNADDERLKQIAE 161 (256)
T ss_pred HHHHHcCCCEEEECCCChHHHHHHHHHHHHC-CCcEEEEECCCCCHHHHHHHHH
Confidence 4566777764 44455444555566666655 5555555556666666555544
No 337
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=82.21 E-value=7.1 Score=22.16 Aligned_cols=53 Identities=9% Similarity=-0.004 Sum_probs=26.3
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
++.|.+.|.+++=...+.+...+..+.+.+. ...+..=..-|.+.++++.+++
T Consensus 26 ~~al~~gGi~~iEiT~~t~~a~~~I~~l~~~-~p~~~vGAGTV~~~e~a~~a~~ 78 (196)
T PF01081_consen 26 AEALIEGGIRAIEITLRTPNALEAIEALRKE-FPDLLVGAGTVLTAEQAEAAIA 78 (196)
T ss_dssp HHHHHHTT--EEEEETTSTTHHHHHHHHHHH-HTTSEEEEES--SHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEecCCccHHHHHHHHHHH-CCCCeeEEEeccCHHHHHHHHH
Confidence 5677778877653222233444445544444 2345455566777777776553
No 338
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=82.21 E-value=6.3 Score=21.57 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=36.5
Q ss_pred HHHHHcCCeEEEeecCcchHHHHHHHHHhhCCC-ceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 3 LEFARQGCKVACAEIQKDLNEETVQMVNQVAPG-AAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 3 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
+...+.|.+|++++-+++.++.+.+.+...|+. ++.....---++++...+++.+.+.
T Consensus 42 ~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~ 100 (172)
T PF03808_consen 42 RRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINAS 100 (172)
T ss_pred HHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHc
Confidence 345567899999888778888888888877432 3322211112566666777666543
No 339
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=82.08 E-value=1.9 Score=27.56 Aligned_cols=28 Identities=29% Similarity=0.380 Sum_probs=22.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQM 28 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~ 28 (69)
+|+.|+++|.+|.+++|+.+..+++.+.
T Consensus 16 lA~nL~~~G~~V~v~dr~~~~~~~l~~~ 43 (470)
T PTZ00142 16 LALNIASRGFKISVYNRTYEKTEEFVKK 43 (470)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHh
Confidence 4789999999999999988776665543
No 340
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=81.98 E-value=5 Score=23.15 Aligned_cols=30 Identities=17% Similarity=0.333 Sum_probs=21.9
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHh
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQ 31 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~ 31 (69)
+..|++.|.+|+.++.+++..+...+....
T Consensus 59 a~~la~~g~~v~~vD~s~~~l~~a~~~~~~ 88 (255)
T PRK11036 59 AIKLAELGHQVILCDLSAEMIQRAKQAAEA 88 (255)
T ss_pred HHHHHHcCCEEEEEECCHHHHHHHHHHHHh
Confidence 567889999999999887666655554443
No 341
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=81.84 E-value=2.4 Score=24.97 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=22.4
Q ss_pred CHHHHHHcC-CeEEEeecCcchHHHHHHHHH
Q psy12399 1 MALEFARQG-CKVACAEIQKDLNEETVQMVN 30 (69)
Q Consensus 1 ia~~la~~G-~~V~~~~~~~~~~~~~~~~~~ 30 (69)
++..|+..| .+|.+++|+.++.+++.+.+.
T Consensus 138 i~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 138 VILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred HHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 367788899 679999998777766666553
No 342
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=81.69 E-value=8.1 Score=25.49 Aligned_cols=51 Identities=14% Similarity=0.079 Sum_probs=29.9
Q ss_pred CHHHHHHc--CCeEEEeecCc--chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHH
Q psy12399 1 MALEFARQ--GCKVACAEIQK--DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRI 54 (69)
Q Consensus 1 ia~~la~~--G~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v 54 (69)
+++.|+++ |++|+..++.. .....+.. . .. ...+.++.+|+++.+.+..++
T Consensus 22 lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~-~-~~-~~~v~~~~~Dl~d~~~~~~~~ 76 (668)
T PLN02260 22 VANRLIRNYPDYKIVVLDKLDYCSNLKNLNP-S-KS-SPNFKFVKGDIASADLVNYLL 76 (668)
T ss_pred HHHHHHHhCCCCEEEEEeCCCccchhhhhhh-c-cc-CCCeEEEECCCCChHHHHHHH
Confidence 36778887 67887776632 11111111 0 11 235778889999988776654
No 343
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=81.41 E-value=2.1 Score=25.35 Aligned_cols=25 Identities=16% Similarity=0.303 Sum_probs=19.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
+++.|++.|.+|.+++++.+..+++
T Consensus 16 mA~~l~~~G~~V~v~d~~~~~~~~~ 40 (296)
T PRK15461 16 MASNLLKQGHQLQVFDVNPQAVDAL 40 (296)
T ss_pred HHHHHHHCCCeEEEEcCCHHHHHHH
Confidence 4678889999999998877665544
No 344
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=81.38 E-value=8.6 Score=22.52 Aligned_cols=55 Identities=7% Similarity=-0.120 Sum_probs=33.0
Q ss_pred HHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 5 FARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 5 la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
..+.|.+|.+++-.+..++++.+.++..|+.++.....---++++.+.+++.+..
T Consensus 101 ~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~ 155 (243)
T PRK03692 101 AGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHA 155 (243)
T ss_pred HHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHh
Confidence 3457888998888777778888887766443433222222234455556666554
No 345
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=81.16 E-value=1.7 Score=25.52 Aligned_cols=26 Identities=19% Similarity=0.204 Sum_probs=19.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
+++.+|+.|++|...|.+++..+...
T Consensus 73 Lse~mAr~Ga~VtgiD~se~~I~~Ak 98 (243)
T COG2227 73 LSEPLARLGASVTGIDASEKPIEVAK 98 (243)
T ss_pred hhHHHHHCCCeeEEecCChHHHHHHH
Confidence 36789999999999887766554444
No 346
>PF03686 UPF0146: Uncharacterised protein family (UPF0146); InterPro: IPR005353 The function of this family of proteins is unknown.; PDB: 2K4M_A.
Probab=81.11 E-value=1.8 Score=22.98 Aligned_cols=20 Identities=20% Similarity=0.386 Sum_probs=14.1
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
+|..|.+.|..|+++|.++.
T Consensus 28 vA~~L~~~G~dV~~tDi~~~ 47 (127)
T PF03686_consen 28 VAKKLKERGFDVIATDINPR 47 (127)
T ss_dssp HHHHHHHHS-EEEEE-SS-S
T ss_pred HHHHHHHcCCcEEEEECccc
Confidence 36788999999999988765
No 347
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=80.98 E-value=4.2 Score=26.84 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=27.0
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVD 51 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 51 (69)
++.|.++|.++++.+.++++.+.. ++. + ...+..|.++++-.+
T Consensus 416 a~~L~~~g~~vvvID~d~~~v~~~----~~~-g--~~v~~GDat~~~~L~ 458 (621)
T PRK03562 416 GRLLLSSGVKMTVLDHDPDHIETL----RKF-G--MKVFYGDATRMDLLE 458 (621)
T ss_pred HHHHHhCCCCEEEEECCHHHHHHH----Hhc-C--CeEEEEeCCCHHHHH
Confidence 567888899998888876654443 222 3 334566666665443
No 348
>PRK03525 crotonobetainyl-CoA:carnitine CoA-transferase; Provisional
Probab=80.89 E-value=6.9 Score=24.51 Aligned_cols=67 Identities=9% Similarity=-0.080 Sum_probs=36.3
Q ss_pred HHHHHHcCCeEEEeecCc-ch-HHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhhcccCCCC
Q psy12399 2 ALEFARQGCKVACAEIQK-DL-NEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKILSYCTPRP 69 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~~~~~ 69 (69)
++.|+..||+||=+.... .. ....--..... ...-..+..|+.+++..+.+.+-+...-.-..|+||
T Consensus 30 ~~lLAdlGAeVIKVE~p~~GD~~R~~~~~~~~~-NrgKrsi~LDLk~~~Gr~~l~~Li~~ADVvien~rp 98 (405)
T PRK03525 30 GQMFAEWGAEVIWIENVAWADTIRVQPNYPQLS-RRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKG 98 (405)
T ss_pred HHHHHHcCCcEEEECCCCCCCccccccchhhhc-cCCCeeEEEeCCCHHHHHHHHHHHHhCCEEEECCCc
Confidence 467899999999764321 11 11000001111 123346788999999876665555444344455555
No 349
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=80.55 E-value=2.4 Score=25.20 Aligned_cols=26 Identities=12% Similarity=0.184 Sum_probs=20.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
+++.|++.|.+|.+++++.+..+.+.
T Consensus 15 la~~L~~~g~~V~~~dr~~~~~~~l~ 40 (298)
T TIGR00872 15 IVRRLAKRGHDCVGYDHDQDAVKAMK 40 (298)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 46788999999999998876655443
No 350
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=80.51 E-value=3.1 Score=23.96 Aligned_cols=29 Identities=17% Similarity=0.237 Sum_probs=19.2
Q ss_pred CHHHHHHcCCeEEEeecCcc-hHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKD-LNEETVQMV 29 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~-~~~~~~~~~ 29 (69)
++++|++.|+.|++..++.+ ......+.+
T Consensus 16 lA~~~a~ag~eV~igs~r~~~~~~a~a~~l 45 (211)
T COG2085 16 LALRLAKAGHEVIIGSSRGPKALAAAAAAL 45 (211)
T ss_pred HHHHHHhCCCeEEEecCCChhHHHHHHHhh
Confidence 47899999999988755443 344444433
No 351
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=80.41 E-value=2.3 Score=24.98 Aligned_cols=24 Identities=21% Similarity=0.529 Sum_probs=18.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~ 24 (69)
++..|++.|.+|++++++.+..+.
T Consensus 14 iA~~l~~~G~~V~~~dr~~~~~~~ 37 (291)
T TIGR01505 14 MSINLAKAGYQLHVTTIGPEVADE 37 (291)
T ss_pred HHHHHHHCCCeEEEEcCCHHHHHH
Confidence 467888999999988887655444
No 352
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=80.39 E-value=2.4 Score=25.14 Aligned_cols=25 Identities=24% Similarity=0.231 Sum_probs=19.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
+++.|++.|.+|.+++++.+..+.+
T Consensus 15 mA~~L~~~g~~v~v~dr~~~~~~~~ 39 (301)
T PRK09599 15 MARRLLRGGHEVVGYDRNPEAVEAL 39 (301)
T ss_pred HHHHHHHCCCeEEEEECCHHHHHHH
Confidence 4788999999999998886655543
No 353
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=80.32 E-value=2.4 Score=27.40 Aligned_cols=29 Identities=21% Similarity=0.255 Sum_probs=21.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMV 29 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~ 29 (69)
++..|++.|++|++++|+.++.+.+.+.+
T Consensus 394 ia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 394 LAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred HHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 46788999999988888766666655443
No 354
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=79.77 E-value=6.5 Score=24.42 Aligned_cols=23 Identities=9% Similarity=0.134 Sum_probs=17.3
Q ss_pred HHHHHHcCCeEEEeecCcchHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~ 24 (69)
++.|.+.|..|++.+++.+..+.
T Consensus 16 a~~L~~~g~~v~vid~~~~~~~~ 38 (453)
T PRK09496 16 AENLSGENNDVTVIDTDEERLRR 38 (453)
T ss_pred HHHHHhCCCcEEEEECCHHHHHH
Confidence 56788899999988887655443
No 355
>KOG1372|consensus
Probab=79.25 E-value=10 Score=23.00 Aligned_cols=57 Identities=14% Similarity=0.061 Sum_probs=35.0
Q ss_pred HHHHHHcCCeEE-EeecCcchHHHHHHHHHhh----CCCceeEEEccCCCHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVA-CAEIQKDLNEETVQMVNQV----APGAAKGYYCDVGNVDSVDLRIGLDF 58 (69)
Q Consensus 2 a~~la~~G~~V~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~v~~~~ 58 (69)
++.|+..|+.|- +..|+..-...-.+.+... .+.....-..|++|...+..+++.+.
T Consensus 45 aEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik 106 (376)
T KOG1372|consen 45 AEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK 106 (376)
T ss_pred HHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence 677889999985 4455443323333333221 02344456789999999888887653
No 356
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=79.04 E-value=3.8 Score=23.16 Aligned_cols=27 Identities=26% Similarity=0.382 Sum_probs=20.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQ 27 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~ 27 (69)
++..|++.|.+|.+++++.+..+.+..
T Consensus 16 la~~L~~~G~~V~v~~r~~~~~~~l~~ 42 (219)
T TIGR01915 16 LALRLAKAGNKIIIGSRDLEKAEEAAA 42 (219)
T ss_pred HHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence 367888999999988887766555443
No 357
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=78.85 E-value=4 Score=21.39 Aligned_cols=28 Identities=14% Similarity=0.179 Sum_probs=18.9
Q ss_pred HHHHHHcC-CeEEEeecCcchHHHHHHHH
Q psy12399 2 ALEFARQG-CKVACAEIQKDLNEETVQMV 29 (69)
Q Consensus 2 a~~la~~G-~~V~~~~~~~~~~~~~~~~~ 29 (69)
++.|++.| ..|.+++++.++.+++.+.+
T Consensus 35 a~~l~~~g~~~v~v~~r~~~~~~~~~~~~ 63 (155)
T cd01065 35 AYALAELGAAKIVIVNRTLEKAKALAERF 63 (155)
T ss_pred HHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 56777775 67888888766665555443
No 358
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=78.80 E-value=2.3 Score=22.82 Aligned_cols=26 Identities=23% Similarity=0.155 Sum_probs=19.6
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQ 27 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~ 27 (69)
|..|+.+|.+|.++.++++..+.+..
T Consensus 15 A~~la~~g~~V~l~~~~~~~~~~i~~ 40 (157)
T PF01210_consen 15 AALLADNGHEVTLWGRDEEQIEEINE 40 (157)
T ss_dssp HHHHHHCTEEEEEETSCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEeccHHHHHHHHH
Confidence 66789999999999998755554443
No 359
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=78.63 E-value=6.9 Score=24.49 Aligned_cols=44 Identities=14% Similarity=0.117 Sum_probs=26.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHH-HHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSV-DLRIGL 56 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~-~~~v~~ 56 (69)
+|+.|...|++|++++...... . +.. ...+|+++.+++ +.+++.
T Consensus 217 ~a~~~~~~Ga~V~~~~g~~~~~---------~-~~~--~~~~~v~~~~~~~~~~~~~ 261 (390)
T TIGR00521 217 LAEAAYKRGADVTLITGPVSLL---------T-PPG--VKSIKVSTAEEMLEAALNE 261 (390)
T ss_pred HHHHHHHCCCEEEEeCCCCccC---------C-CCC--cEEEEeccHHHHHHHHHHh
Confidence 4788999999998765432210 1 211 245688888887 545434
No 360
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=78.55 E-value=4.8 Score=24.14 Aligned_cols=31 Identities=16% Similarity=0.407 Sum_probs=25.5
Q ss_pred HHHHHHcCC-eEEEeecCcchHHHHHHHHHhh
Q psy12399 2 ALEFARQGC-KVACAEIQKDLNEETVQMVNQV 32 (69)
Q Consensus 2 a~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~ 32 (69)
+..|++.|+ ++.++.|+.++++++.+.+...
T Consensus 142 ~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~ 173 (283)
T COG0169 142 AFALAEAGAKRITVVNRTRERAEELADLFGEL 173 (283)
T ss_pred HHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence 567899995 6999999988888888887654
No 361
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=78.47 E-value=8.7 Score=20.85 Aligned_cols=42 Identities=12% Similarity=0.040 Sum_probs=25.3
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccC
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDV 44 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 44 (69)
+..+++.|.+|+.++.++...+.....+... +.++.+..+|+
T Consensus 34 ~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~ 75 (179)
T TIGR00537 34 AIRLKGKGKCILTTDINPFAVKELRENAKLN-NVGLDVVMTDL 75 (179)
T ss_pred HHHHHhcCCEEEEEECCHHHHHHHHHHHHHc-CCceEEEEccc
Confidence 3567777777888888776655555555433 33444444454
No 362
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=78.35 E-value=8.5 Score=22.88 Aligned_cols=30 Identities=10% Similarity=0.160 Sum_probs=23.4
Q ss_pred HHHHHHcCC-eEEEeecCcchHHHHHHHHHh
Q psy12399 2 ALEFARQGC-KVACAEIQKDLNEETVQMVNQ 31 (69)
Q Consensus 2 a~~la~~G~-~V~~~~~~~~~~~~~~~~~~~ 31 (69)
+..|+..|+ +|.+++|+.++.+.+.+.+..
T Consensus 143 a~aL~~~G~~~I~I~nR~~~ka~~la~~l~~ 173 (284)
T PRK12549 143 AHALLTLGVERLTIFDVDPARAAALADELNA 173 (284)
T ss_pred HHHHHHcCCCEEEEECCCHHHHHHHHHHHHh
Confidence 567888998 588899988888877777643
No 363
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=77.93 E-value=4.3 Score=24.08 Aligned_cols=27 Identities=26% Similarity=0.345 Sum_probs=20.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQ 27 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~ 27 (69)
|+..|+..|++|++++++.+..+...+
T Consensus 19 iA~~l~~~g~~V~~~d~~~~~~~~~~~ 45 (311)
T PRK06130 19 IAALFARKGLQVVLIDVMEGALERARG 45 (311)
T ss_pred HHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 467889999999999987766555544
No 364
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=77.80 E-value=3.2 Score=24.62 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=18.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
+++.|++.|.+|.+++++.++.+.+
T Consensus 15 mA~~L~~~g~~v~v~dr~~~~~~~~ 39 (299)
T PRK12490 15 MAERLREDGHEVVGYDVNQEAVDVA 39 (299)
T ss_pred HHHHHHhCCCEEEEEECCHHHHHHH
Confidence 4678889999998888876654443
No 365
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=77.20 E-value=3.9 Score=19.68 Aligned_cols=29 Identities=14% Similarity=0.108 Sum_probs=20.9
Q ss_pred CHHHHHHcC---CeEEEe-ecCcchHHHHHHHH
Q psy12399 1 MALEFARQG---CKVACA-EIQKDLNEETVQMV 29 (69)
Q Consensus 1 ia~~la~~G---~~V~~~-~~~~~~~~~~~~~~ 29 (69)
+++.|++.| .+|.+. +++.++.+++....
T Consensus 14 l~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 14 LARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp HHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred HHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 367888999 888854 88877776665554
No 366
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=77.15 E-value=12 Score=21.72 Aligned_cols=53 Identities=6% Similarity=-0.042 Sum_probs=31.4
Q ss_pred HHHHHHcCCe-EEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCK-VACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
++.+.+.|++ +++.+...+...++.+.+++. +.....+...-+..+.++.+.+
T Consensus 97 i~~~~~aG~~giiipDl~~ee~~~~~~~~~~~-g~~~i~~i~P~T~~~~i~~i~~ 150 (242)
T cd04724 97 LRDAKEAGVDGLIIPDLPPEEAEEFREAAKEY-GLDLIFLVAPTTPDERIKKIAE 150 (242)
T ss_pred HHHHHHCCCcEEEECCCCHHHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHh
Confidence 3456677777 444455444555666666665 6556555556666666655543
No 367
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=76.70 E-value=4 Score=27.39 Aligned_cols=25 Identities=20% Similarity=0.252 Sum_probs=20.2
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
||..|+..|++|++++.+.+.++..
T Consensus 328 IA~~~a~~G~~V~l~d~~~~~l~~~ 352 (715)
T PRK11730 328 IAYQSASKGVPVIMKDINQKALDLG 352 (715)
T ss_pred HHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 5778999999999999987765543
No 368
>COG4007 Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [General function prediction only]
Probab=76.60 E-value=4.4 Score=24.50 Aligned_cols=32 Identities=38% Similarity=0.533 Sum_probs=21.1
Q ss_pred CHHHHHHcCCeEEEeecCcchH-HHHHHHHHhh
Q psy12399 1 MALEFARQGCKVACAEIQKDLN-EETVQMVNQV 32 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~-~~~~~~~~~~ 32 (69)
+|..|++.|.+|++.+-+.+.. .+..+.++..
T Consensus 36 mAiefAeAGHDVVLaePn~d~~dd~~w~~vedA 68 (340)
T COG4007 36 MAIEFAEAGHDVVLAEPNRDIMDDEHWKRVEDA 68 (340)
T ss_pred HHHHHHHcCCcEEeecCCccccCHHHHHHHHhc
Confidence 5789999999999987655443 2223444433
No 369
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=76.20 E-value=8.3 Score=19.47 Aligned_cols=57 Identities=16% Similarity=0.040 Sum_probs=35.8
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEcc-CCCHHHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCD-VGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~~~~~v~~~~~~ 60 (69)
+..|-..|++|+..+.+.+ .+++.+.+.+. ..++..+.+- -.....+.++++.+.+.
T Consensus 20 ~~~l~~~G~~V~~lg~~~~-~~~l~~~~~~~-~pdvV~iS~~~~~~~~~~~~~i~~l~~~ 77 (119)
T cd02067 20 ARALRDAGFEVIDLGVDVP-PEEIVEAAKEE-DADAIGLSGLLTTHMTLMKEVIEELKEA 77 (119)
T ss_pred HHHHHHCCCEEEECCCCCC-HHHHHHHHHHc-CCCEEEEeccccccHHHHHHHHHHHHHc
Confidence 4456679999977654432 34555556555 5566665553 45566777777777665
No 370
>PLN00016 RNA-binding protein; Provisional
Probab=75.96 E-value=5.2 Score=24.38 Aligned_cols=20 Identities=25% Similarity=0.341 Sum_probs=16.0
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
+++.|+++|+.|+++.|+..
T Consensus 72 lv~~L~~~G~~V~~l~R~~~ 91 (378)
T PLN00016 72 LAKELVKAGHEVTLFTRGKE 91 (378)
T ss_pred HHHHHHHCCCEEEEEecCCc
Confidence 46789999999988877644
No 371
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=75.84 E-value=9.4 Score=23.61 Aligned_cols=23 Identities=22% Similarity=0.335 Sum_probs=17.1
Q ss_pred HHHHHH-cCCeEEEeecCcchHHH
Q psy12399 2 ALEFAR-QGCKVACAEIQKDLNEE 24 (69)
Q Consensus 2 a~~la~-~G~~V~~~~~~~~~~~~ 24 (69)
+..+++ .|++|+..++++++.+.
T Consensus 182 avQ~Aka~ga~Via~~~~~~K~e~ 205 (339)
T COG1064 182 AVQYAKAMGAEVIAITRSEEKLEL 205 (339)
T ss_pred HHHHHHHcCCeEEEEeCChHHHHH
Confidence 445666 89999999998776544
No 372
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=75.67 E-value=12 Score=20.86 Aligned_cols=55 Identities=7% Similarity=0.006 Sum_probs=34.5
Q ss_pred HHHHcCCeEEEeecCcchHHHHHHHHHhhCCC-ceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 4 EFARQGCKVACAEIQKDLNEETVQMVNQVAPG-AAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 4 ~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
...+.|.+|.+++-.++.++++.+.+++.|+. ++.....-. ++++-..+++.+.+
T Consensus 43 ~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f-~~~~~~~i~~~I~~ 98 (177)
T TIGR00696 43 RAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPL-EPEERKAALAKIAR 98 (177)
T ss_pred HHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCC-ChHHHHHHHHHHHH
Confidence 34568889999888888888888888876532 333332222 34444556666554
No 373
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=75.45 E-value=4.7 Score=23.10 Aligned_cols=27 Identities=22% Similarity=0.257 Sum_probs=19.7
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQM 28 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~ 28 (69)
+..|+++|++|+.++.++...+...++
T Consensus 52 ~~~La~~G~~VvGvDls~~Ai~~~~~e 78 (218)
T PF05724_consen 52 MLWLAEQGHDVVGVDLSPTAIEQAFEE 78 (218)
T ss_dssp HHHHHHTTEEEEEEES-HHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEecCHHHHHHHHHH
Confidence 457899999999999887766665333
No 374
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=75.40 E-value=19 Score=23.25 Aligned_cols=53 Identities=11% Similarity=0.016 Sum_probs=34.0
Q ss_pred HHHHHHcCCeEEEeecCc---chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQK---DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+..|.++|+++++.|... ....+..+.++.. ...+..+..++...+....+++
T Consensus 230 a~~Lv~aGVd~i~~D~a~g~~~~~~~~i~~i~~~-~~~~~vi~g~~~t~~~~~~l~~ 285 (475)
T TIGR01303 230 AKALLDAGVDVLVIDTAHGHQVKMISAIKAVRAL-DLGVPIVAGNVVSAEGVRDLLE 285 (475)
T ss_pred HHHHHHhCCCEEEEeCCCCCcHHHHHHHHHHHHH-CCCCeEEEeccCCHHHHHHHHH
Confidence 567888999987765432 2344455566554 3345555566888888887764
No 375
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=75.38 E-value=4.7 Score=27.15 Aligned_cols=26 Identities=15% Similarity=0.254 Sum_probs=20.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
||..|+..|..|++++.+.+.++...
T Consensus 328 IA~~~a~~G~~V~l~d~~~~~l~~~~ 353 (714)
T TIGR02437 328 IAYQSASKGTPIVMKDINQHSLDLGL 353 (714)
T ss_pred HHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 57789999999999998877655443
No 376
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=75.20 E-value=5 Score=23.51 Aligned_cols=23 Identities=22% Similarity=0.241 Sum_probs=18.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNE 23 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~ 23 (69)
++..|+..|.+|++++++.+..+
T Consensus 18 ia~~la~~g~~V~~~d~~~~~~~ 40 (282)
T PRK05808 18 IAQVCAVAGYDVVMVDISDAAVD 40 (282)
T ss_pred HHHHHHHCCCceEEEeCCHHHHH
Confidence 46788999999999998776654
No 377
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A.
Probab=75.05 E-value=8.1 Score=18.77 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=25.6
Q ss_pred CeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCH
Q psy12399 10 CKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNV 47 (69)
Q Consensus 10 ~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 47 (69)
.+++.+|.+++.++...+..... +.++.++..|+.+-
T Consensus 25 ~~~~gvD~s~~~l~~~~~~~~~~-~~~~~~~~~D~~~l 61 (101)
T PF13649_consen 25 SRVIGVDISPEMLELAKKRFSED-GPKVRFVQADARDL 61 (101)
T ss_dssp SEEEEEES-HHHHHHHHHHSHHT-TTTSEEEESCTTCH
T ss_pred ceEEEEECCHHHHHHHHHhchhc-CCceEEEECCHhHC
Confidence 67788898877777666666554 55777788888663
No 378
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=74.86 E-value=13 Score=20.90 Aligned_cols=57 Identities=16% Similarity=0.028 Sum_probs=36.4
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEc-cCCCHHHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYC-DVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~~~~~~~~~v~~~~~~ 60 (69)
+..|-..|++|+-.+.+-+ .+++.+.+.+. ..++..+.+ --+....+.++++.+.+.
T Consensus 103 ~~~l~~~G~~vi~lG~~~p-~~~l~~~~~~~-~~d~v~lS~~~~~~~~~~~~~i~~lr~~ 160 (201)
T cd02070 103 ATMLEANGFEVIDLGRDVP-PEEFVEAVKEH-KPDILGLSALMTTTMGGMKEVIEALKEA 160 (201)
T ss_pred HHHHHHCCCEEEECCCCCC-HHHHHHHHHHc-CCCEEEEeccccccHHHHHHHHHHHHHC
Confidence 3456679999976654433 35555666555 566766666 344567778887777665
No 379
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=74.65 E-value=5.3 Score=24.29 Aligned_cols=29 Identities=24% Similarity=0.356 Sum_probs=20.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMV 29 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~ 29 (69)
||..++..|+.|.+.+++.+.++.....+
T Consensus 18 IA~~~A~~G~~V~l~D~~~~~~~~~~~~i 46 (307)
T COG1250 18 IAAVFALAGYDVVLKDISPEALERALAYI 46 (307)
T ss_pred HHHHHhhcCCceEEEeCCHHHHHHHHHHH
Confidence 57788887799999998866555444433
No 380
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=74.19 E-value=14 Score=21.10 Aligned_cols=54 Identities=11% Similarity=-0.003 Sum_probs=31.8
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+++.+.+.|.+++=+..+.+...+..+.+.+. ..++..=..=|.+.++.+.+++
T Consensus 21 ia~al~~gGi~~iEit~~tp~a~~~I~~l~~~-~~~~~vGAGTVl~~e~a~~ai~ 74 (201)
T PRK06015 21 LARALAAGGLPAIEITLRTPAALDAIRAVAAE-VEEAIVGAGTILNAKQFEDAAK 74 (201)
T ss_pred HHHHHHHCCCCEEEEeCCCccHHHHHHHHHHH-CCCCEEeeEeCcCHHHHHHHHH
Confidence 36778888888653333334445555556554 2345444556777787776553
No 381
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=73.69 E-value=4.8 Score=24.11 Aligned_cols=26 Identities=15% Similarity=0.143 Sum_probs=19.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
++..|++.|.+|.+++++.+..+.+.
T Consensus 19 ia~~L~~~G~~V~~~~r~~~~~~~i~ 44 (328)
T PRK14618 19 LAVLAASKGVPVRLWARRPEFAAALA 44 (328)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 46788999999999998765544443
No 382
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=73.69 E-value=19 Score=23.40 Aligned_cols=58 Identities=9% Similarity=0.039 Sum_probs=41.7
Q ss_pred HHHHcCCe-EEEeec---CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 4 EFARQGCK-VACAEI---QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 4 ~la~~G~~-V~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
.|-+-|-. |+++.. ..++..++..++++.|+..+..+.|+--..+++..++++++-+|
T Consensus 175 ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpvnc~~l~~~DI~~Il~~vLyEF 236 (492)
T PF09547_consen 175 ELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPVNCEQLREEDITRILEEVLYEF 236 (492)
T ss_pred HHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEeehHHcCHHHHHHHHHHHHhcC
Confidence 34444543 444332 34456778888888778888888998888999999999988776
No 383
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=73.64 E-value=7.9 Score=18.00 Aligned_cols=29 Identities=21% Similarity=0.405 Sum_probs=19.5
Q ss_pred HHHHHHc-CCeEEEeecCcchHHHHHHHHH
Q psy12399 2 ALEFARQ-GCKVACAEIQKDLNEETVQMVN 30 (69)
Q Consensus 2 a~~la~~-G~~V~~~~~~~~~~~~~~~~~~ 30 (69)
+..|++. +.+|+.++.+++..+...+...
T Consensus 11 ~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~ 40 (95)
T PF08241_consen 11 AAALAKRGGASVTGIDISEEMLEQARKRLK 40 (95)
T ss_dssp HHHHHHTTTCEEEEEES-HHHHHHHHHHTT
T ss_pred HHHHHhccCCEEEEEeCCHHHHHHHHhccc
Confidence 4567777 8889999988776665555443
No 384
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=73.59 E-value=13 Score=24.72 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=26.0
Q ss_pred CHHHHHHc-CCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHH
Q psy12399 1 MALEFARQ-GCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDS 49 (69)
Q Consensus 1 ia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 49 (69)
+++.|++. |++|+.+++....... +.. ...+.++.+|+++..+
T Consensus 331 Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~--~~~~~~~~gDl~d~~~ 374 (660)
T PRK08125 331 LTERLLRDDNYEVYGLDIGSDAISR----FLG--HPRFHFVEGDISIHSE 374 (660)
T ss_pred HHHHHHhCCCcEEEEEeCCchhhhh----hcC--CCceEEEeccccCcHH
Confidence 35678775 7999988875432211 111 1246677888887554
No 385
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=73.14 E-value=5.2 Score=27.06 Aligned_cols=28 Identities=14% Similarity=0.029 Sum_probs=21.5
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQM 28 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~ 28 (69)
||..++..|+.|++.+.+.+.++...+.
T Consensus 350 IA~~~a~~G~~V~l~d~~~~~l~~~~~~ 377 (737)
T TIGR02441 350 IAQVSVDKGLKTVLKDATPAGLDRGQQQ 377 (737)
T ss_pred HHHHHHhCCCcEEEecCCHHHHHHHHHH
Confidence 5778999999999999887766554433
No 386
>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases.; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A ....
Probab=73.07 E-value=13 Score=20.15 Aligned_cols=43 Identities=19% Similarity=0.153 Sum_probs=27.4
Q ss_pred HHHHHHcCCe--EEEeecCcchHHHHHHHHHhhCCCc-eeEEEccCC
Q psy12399 2 ALEFARQGCK--VACAEIQKDLNEETVQMVNQVAPGA-AKGYYCDVG 45 (69)
Q Consensus 2 a~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~ 45 (69)
+..+++.+.. |+.++.++...+.....++.. +.. +.++..|+.
T Consensus 46 ~~~la~~~~~~~v~~vDi~~~a~~~a~~n~~~n-~~~~v~~~~~d~~ 91 (170)
T PF05175_consen 46 SLALAKRGPDAKVTAVDINPDALELAKRNAERN-GLENVEVVQSDLF 91 (170)
T ss_dssp HHHHHHTSTCEEEEEEESBHHHHHHHHHHHHHT-TCTTEEEEESSTT
T ss_pred HHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc-Ccccccccccccc
Confidence 4566777666 777888877666666666554 433 666666653
No 387
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=72.82 E-value=17 Score=21.54 Aligned_cols=51 Identities=6% Similarity=0.040 Sum_probs=26.8
Q ss_pred HHHHHcCCe-EEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHH
Q psy12399 3 LEFARQGCK-VACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRI 54 (69)
Q Consensus 3 ~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v 54 (69)
+.+++.|.+ |++.|...++..++.+.+++. +....++..--|..+.++.+.
T Consensus 113 ~~~~~aGvdgviipDLP~ee~~~~~~~~~~~-gi~~I~lv~PtT~~eri~~i~ 164 (263)
T CHL00200 113 KKISQAGVKGLIIPDLPYEESDYLISVCNLY-NIELILLIAPTSSKSRIQKIA 164 (263)
T ss_pred HHHHHcCCeEEEecCCCHHHHHHHHHHHHHc-CCCEEEEECCCCCHHHHHHHH
Confidence 445666766 344565555555555555555 544444444444455554443
No 388
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=72.74 E-value=6.2 Score=25.30 Aligned_cols=24 Identities=21% Similarity=0.201 Sum_probs=19.6
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~ 24 (69)
||..|+..|.+|.+++++.+..+.
T Consensus 19 iA~~la~~G~~V~v~D~~~~~~~~ 42 (495)
T PRK07531 19 WAARFLLAGIDVAVFDPHPEAERI 42 (495)
T ss_pred HHHHHHhCCCeEEEEeCCHHHHHH
Confidence 477899999999999988766544
No 389
>cd04131 Rnd Rnd subfamily. The Rnd subfamily contains Rnd1/Rho6, Rnd2/Rho7, and Rnd3/RhoE/Rho8. These novel Rho family proteins have substantial structural differences compared to other Rho members, including N- and C-terminal extensions relative to other Rhos. Rnd3/RhoE is farnesylated at the C-terminal prenylation site, unlike most other Rho proteins that are geranylgeranylated. In addition, Rnd members are unable to hydrolyze GTP and are resistant to GAP activity. They are believed to exist only in the GTP-bound conformation, and are antagonists of RhoA activity. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Rho proteins. Due to the presence of truncated sequences in this CD, the lipid modification site is not available for annotation.
Probab=72.68 E-value=13 Score=20.19 Aligned_cols=28 Identities=14% Similarity=0.031 Sum_probs=19.5
Q ss_pred CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 34 PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 34 ~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+..+..+..|++++++.+.+.+.....+
T Consensus 72 ~a~~~ilvfdit~~~Sf~~~~~~w~~~i 99 (178)
T cd04131 72 DSDAVLICFDISRPETLDSVLKKWRGEI 99 (178)
T ss_pred CCCEEEEEEECCChhhHHHHHHHHHHHH
Confidence 4567778889999988877655444433
No 390
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=72.66 E-value=11 Score=19.32 Aligned_cols=57 Identities=19% Similarity=0.119 Sum_probs=33.5
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEc-cCCCHHHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYC-DVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~~~~~~~~~v~~~~~~ 60 (69)
+..|...|++|+-.+.+.+ .++..+...+. +.++..+.+ +-...+.+.++++.+.+.
T Consensus 20 ~~~l~~~G~~vi~lG~~vp-~e~~~~~a~~~-~~d~V~iS~~~~~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 20 ARALRDAGFEVIYTGLRQT-PEEIVEAAIQE-DVDVIGLSSLSGGHMTLFPEVIELLREL 77 (122)
T ss_pred HHHHHHCCCEEEECCCCCC-HHHHHHHHHHc-CCCEEEEcccchhhHHHHHHHHHHHHhc
Confidence 3456678999887655433 34455555554 556655544 334555666666666655
No 391
>KOG0820|consensus
Probab=72.54 E-value=12 Score=22.79 Aligned_cols=44 Identities=23% Similarity=0.267 Sum_probs=29.1
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCC--CceeEEEccCCC
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAP--GAAKGYYCDVGN 46 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 46 (69)
...|++.|++|+.+..+..-..++....+.. + .+...+.+|+-.
T Consensus 73 T~~lLe~~kkVvA~E~Dprmvael~krv~gt-p~~~kLqV~~gD~lK 118 (315)
T KOG0820|consen 73 TVKLLEAGKKVVAVEIDPRMVAELEKRVQGT-PKSGKLQVLHGDFLK 118 (315)
T ss_pred HHHHHHhcCeEEEEecCcHHHHHHHHHhcCC-CccceeeEEeccccc
Confidence 4578999999999877655455555555432 2 356677777644
No 392
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=72.52 E-value=15 Score=22.87 Aligned_cols=52 Identities=10% Similarity=-0.003 Sum_probs=28.3
Q ss_pred HHHHH--cCCeEEEeecCc---chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 3 LEFAR--QGCKVACAEIQK---DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 3 ~~la~--~G~~V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
..|.+ .|.+++++|... ...-+..+.+++. .++...+..+|...+....+++
T Consensus 114 ~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~-~P~~~vIaGNV~T~e~a~~Li~ 170 (346)
T PRK05096 114 KQILALSPALNFICIDVANGYSEHFVQFVAKAREA-WPDKTICAGNVVTGEMVEELIL 170 (346)
T ss_pred HHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHh-CCCCcEEEecccCHHHHHHHHH
Confidence 34455 366666655432 2233444555554 3345566777777777766654
No 393
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=72.25 E-value=3.8 Score=19.57 Aligned_cols=17 Identities=29% Similarity=0.229 Sum_probs=14.1
Q ss_pred CHHHHHHcCCeEEEeec
Q psy12399 1 MALEFARQGCKVACAEI 17 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~ 17 (69)
+|+.|+++|+.|+..|.
T Consensus 35 ~a~~L~~~G~~V~~~D~ 51 (79)
T PF12146_consen 35 LAEFLAEQGYAVFAYDH 51 (79)
T ss_pred HHHHHHhCCCEEEEECC
Confidence 37889999999998764
No 394
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=72.13 E-value=4.8 Score=22.21 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=15.3
Q ss_pred CHHHHHHcCCeEEEeecCcch
Q psy12399 1 MALEFARQGCKVACAEIQKDL 21 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~ 21 (69)
+|++|...|++|++++.++-+
T Consensus 38 ~A~~lr~~Ga~V~V~e~DPi~ 58 (162)
T PF00670_consen 38 IARALRGLGARVTVTEIDPIR 58 (162)
T ss_dssp HHHHHHHTT-EEEEE-SSHHH
T ss_pred HHHHHhhCCCEEEEEECChHH
Confidence 478888999999999887644
No 395
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=72.01 E-value=6.9 Score=21.53 Aligned_cols=23 Identities=13% Similarity=0.089 Sum_probs=15.9
Q ss_pred HHHHHHcCCeEEEeecCcchHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~ 24 (69)
++.|.+.|++|.++.++.+++.+
T Consensus 61 a~~L~~~g~~V~v~~r~~~~l~~ 83 (168)
T cd01080 61 AALLLNRNATVTVCHSKTKNLKE 83 (168)
T ss_pred HHHHhhCCCEEEEEECCchhHHH
Confidence 56777888888777776544443
No 396
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=72.00 E-value=12 Score=22.12 Aligned_cols=36 Identities=8% Similarity=0.080 Sum_probs=11.0
Q ss_pred CCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCC
Q psy12399 9 GCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVG 45 (69)
Q Consensus 9 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 45 (69)
..+|.+.+.++.-.+-.....++. +..+..+..|+.
T Consensus 67 ~~~I~VvDiDeRll~fI~~~a~~~-gl~i~~~~~DlR 102 (243)
T PF01861_consen 67 PKRITVVDIDERLLDFINRVAEEE-GLPIEAVHYDLR 102 (243)
T ss_dssp -SEEEEE-S-HHHHHHHHHHHHHH-T--EEEE---TT
T ss_pred CCeEEEEEcCHHHHHHHHHHHHHc-CCceEEEEeccc
Confidence 344555555443333332222233 333444444443
No 397
>PF09445 Methyltransf_15: RNA cap guanine-N2 methyltransferase; InterPro: IPR019012 RNA cap guanine-N2 methyltransferases such as Schizosaccharomyces pombe (Fission yeast) trimethylguanosine synthase (Tgs1) and Giardia lamblia (Giardia intestinalis) Tgs2, catalyse the methylation step(s) for the conversion of the 7-monomethylguanosine (m(7)G) caps of snRNAs and snoRNAs to a 2,2,7-trimethylguanosine (m(2,2,7)G) cap structure [, , ]. Trimethylguanosine synthase is specific for guanine, and N7 methylation must precede N2 methylation. This enzyme is required for pre-mRNA splicing, pre-rRNA processing and small ribosomal subunit synthesis. As such, this enzyme plays a role in transcriptional regulation. ; GO: 0008168 methyltransferase activity, 0001510 RNA methylation, 0009452 RNA capping; PDB: 3EGI_B 3GDH_A.
Probab=71.84 E-value=15 Score=20.32 Aligned_cols=44 Identities=16% Similarity=0.031 Sum_probs=28.7
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCC--ceeEEEccCCC
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPG--AAKGYYCDVGN 46 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~ 46 (69)
+..||+.+.+|+.++.++.+.+-+..-.+-. |. ++.++.+|..+
T Consensus 14 tIqFA~~~~~Viaidid~~~~~~a~hNa~vY-Gv~~~I~~i~gD~~~ 59 (163)
T PF09445_consen 14 TIQFARTFDRVIAIDIDPERLECAKHNAEVY-GVADNIDFICGDFFE 59 (163)
T ss_dssp HHHHHHTT-EEEEEES-HHHHHHHHHHHHHT-T-GGGEEEEES-HHH
T ss_pred HHHHHHhCCeEEEEECCHHHHHHHHHHHHHc-CCCCcEEEEeCCHHH
Confidence 4678999889999999887766655555444 53 67888887643
No 398
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=71.57 E-value=4 Score=25.36 Aligned_cols=24 Identities=21% Similarity=0.331 Sum_probs=19.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~ 24 (69)
+|..|++.|.+|+.++++.++.+.
T Consensus 15 lA~~La~~G~~V~~~d~~~~~v~~ 38 (411)
T TIGR03026 15 LAALLADLGHEVTGVDIDQEKVDK 38 (411)
T ss_pred HHHHHHhcCCeEEEEECCHHHHHH
Confidence 467899999999999987665544
No 399
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=71.56 E-value=4.9 Score=25.17 Aligned_cols=24 Identities=21% Similarity=0.255 Sum_probs=19.7
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~ 24 (69)
+|..|++.|.+|+.++++++..+.
T Consensus 18 ~A~~La~~G~~V~~~D~~~~~v~~ 41 (415)
T PRK11064 18 TAAAFASRQKQVIGVDINQHAVDT 41 (415)
T ss_pred HHHHHHhCCCEEEEEeCCHHHHHH
Confidence 477899999999999988776554
No 400
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=71.51 E-value=13 Score=19.53 Aligned_cols=38 Identities=13% Similarity=0.186 Sum_probs=28.4
Q ss_pred CCeEEEeecCcchHHHHHHHHHhhCCC-ceeEEEccCCCH
Q psy12399 9 GCKVACAEIQKDLNEETVQMVNQVAPG-AAKGYYCDVGNV 47 (69)
Q Consensus 9 G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~ 47 (69)
+.+++.+|.+++..+.....++.. +. ++.+...|+.+.
T Consensus 28 ~~~i~gvD~s~~~i~~a~~~~~~~-~~~ni~~~~~d~~~l 66 (152)
T PF13847_consen 28 GAKIIGVDISEEMIEYAKKRAKEL-GLDNIEFIQGDIEDL 66 (152)
T ss_dssp TSEEEEEESSHHHHHHHHHHHHHT-TSTTEEEEESBTTCG
T ss_pred CCEEEEEECcHHHHHHhhcccccc-cccccceEEeehhcc
Confidence 678888999888777777766554 33 688888888774
No 401
>cd04172 Rnd3_RhoE_Rho8 Rnd3/RhoE/Rho8 subfamily. Rnd3/RhoE/Rho8 is a member of the novel Rho subfamily Rnd, together with Rnd1/Rho6 and Rnd2/Rho7. Rnd3/RhoE is known to bind the serine-threonine kinase ROCK I. Unphosphorylated Rnd3/RhoE associates primarily with membranes, but ROCK I-phosphorylated Rnd3/RhoE localizes in the cytosol. Phosphorylation of Rnd3/RhoE correlates with its activity in disrupting RhoA-induced stress fibers and inhibiting Ras-induced fibroblast transformation. In cells that lack stress fibers, such as macrophages and monocytes, Rnd3/RhoE induces a redistribution of actin, causing morphological changes in the cell. In addition, Rnd3/RhoE has been shown to inhibit cell cycle progression in G1 phase at a point upstream of the pRb family pocket protein checkpoint. Rnd3/RhoE has also been shown to inhibit Ras- and Raf-induced fibroblast transformation. In mammary epithelial tumor cells, Rnd3/RhoE regulates the assembly of the apical junction complex and tight
Probab=71.43 E-value=15 Score=20.18 Aligned_cols=28 Identities=14% Similarity=0.030 Sum_probs=20.1
Q ss_pred CCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 34 PGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 34 ~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+..+..+..|++++++.+.+.......+
T Consensus 76 ~ad~~ilvyDit~~~Sf~~~~~~w~~~i 103 (182)
T cd04172 76 DSDAVLICFDISRPETLDSVLKKWKGEI 103 (182)
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHH
Confidence 4567788889999998877655544443
No 402
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=71.38 E-value=4.1 Score=23.40 Aligned_cols=17 Identities=24% Similarity=0.303 Sum_probs=14.1
Q ss_pred CHHHHHHcCCeEEEeec
Q psy12399 1 MALEFARQGCKVACAEI 17 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~ 17 (69)
+|+.|+++|++|+++++
T Consensus 32 LA~~L~~~G~~V~li~r 48 (229)
T PRK06732 32 IAETFLAAGHEVTLVTT 48 (229)
T ss_pred HHHHHHhCCCEEEEEEC
Confidence 47889999999988654
No 403
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=71.02 E-value=15 Score=20.11 Aligned_cols=31 Identities=16% Similarity=0.196 Sum_probs=23.1
Q ss_pred HHHHcCCeEEEeecCcchHHHHHHHHHhhCC
Q psy12399 4 EFARQGCKVACAEIQKDLNEETVQMVNQVAP 34 (69)
Q Consensus 4 ~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~ 34 (69)
...++|.+|.+++-+++.++++.+.+++.|+
T Consensus 41 ~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp 71 (171)
T cd06533 41 LAAQKGLRVFLLGAKPEVLEKAAERLRARYP 71 (171)
T ss_pred HHHHcCCeEEEECCCHHHHHHHHHHHHHHCC
Confidence 3445688999988888888888878877643
No 404
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=70.94 E-value=7.2 Score=23.10 Aligned_cols=28 Identities=14% Similarity=0.169 Sum_probs=21.3
Q ss_pred HHHHHHcCC-eEEEeecCcchHHHHHHHH
Q psy12399 2 ALEFARQGC-KVACAEIQKDLNEETVQMV 29 (69)
Q Consensus 2 a~~la~~G~-~V~~~~~~~~~~~~~~~~~ 29 (69)
+..|++.|+ +|.++.|+.++.+++.+.+
T Consensus 141 ~~aL~~~G~~~i~I~nRt~~ka~~La~~~ 169 (282)
T TIGR01809 141 VYALASLGVTDITVINRNPDKLSRLVDLG 169 (282)
T ss_pred HHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Confidence 567888997 4888889877777766654
No 405
>PRK11430 putative CoA-transferase; Provisional
Probab=70.68 E-value=16 Score=22.72 Aligned_cols=67 Identities=12% Similarity=0.021 Sum_probs=35.9
Q ss_pred HHHHHHcCCeEEEeecCc-ch-HHH-------HHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhhcccCCCC
Q psy12399 2 ALEFARQGCKVACAEIQK-DL-NEE-------TVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKILSYCTPRP 69 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~-~~-~~~-------~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~~~~~ 69 (69)
++.|+..||.||=+.... .. ... ....+... ...-..+..|+.+++..+.+.+-+...-.-..|+||
T Consensus 28 ~~~LAdlGAeVIKVE~p~~GD~~R~~~p~~~~~s~~f~~~-NrgKrsv~lDLk~~~Gr~~~~~L~~~ADVvien~rp 103 (381)
T PRK11430 28 TQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFI-NHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRP 103 (381)
T ss_pred HHHHHHcCCCEEEECCCCCCccccccCCCCCCccHHHHHh-CCCCeEEEecCCCHHHHHHHHHHHhcCCEEEeCCCc
Confidence 467899999998654321 00 000 00011111 223456788999999876655554443344445554
No 406
>KOG2550|consensus
Probab=69.83 E-value=17 Score=23.44 Aligned_cols=58 Identities=9% Similarity=0.017 Sum_probs=38.6
Q ss_pred HHHHHcCCeEEEeecCcch---HHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 3 LEFARQGCKVACAEIQKDL---NEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 3 ~~la~~G~~V~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
..|++.|.+|+++|.+.-. --+....+++. -+....+..++--.++.++++..=.+-+
T Consensus 257 ~ll~~aGvdvviLDSSqGnS~~qiemik~iK~~-yP~l~ViaGNVVT~~qa~nLI~aGaDgL 317 (503)
T KOG2550|consen 257 DLLVQAGVDVVILDSSQGNSIYQLEMIKYIKET-YPDLQIIAGNVVTKEQAANLIAAGADGL 317 (503)
T ss_pred HHhhhcCCcEEEEecCCCcchhHHHHHHHHHhh-CCCceeeccceeeHHHHHHHHHccCcee
Confidence 4577889999888765432 23345555655 4567777888888888888876544433
No 407
>TIGR03253 oxalate_frc formyl-CoA transferase. This enzyme, formyl-CoA transferase, transfers coenzyme A from formyl-CoA to oxalate. It forms a pathway, together with oxalyl-CoA decarboxylase, for oxalate degradation; decarboxylation by the latter gene regenerates formyl-CoA. The two enzymes typically are encoded by a two-gene operon.
Probab=69.72 E-value=25 Score=22.14 Aligned_cols=67 Identities=10% Similarity=0.009 Sum_probs=36.2
Q ss_pred HHHHHHcCCeEEEeecCc--chHHH--------HHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhhcccCCCC
Q psy12399 2 ALEFARQGCKVACAEIQK--DLNEE--------TVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKILSYCTPRP 69 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~--~~~~~--------~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~~~~~ 69 (69)
++.|+..||.||=+.... +.... ....+... ...-..+..|+.+++..+.+.+-+...-.-..|+||
T Consensus 22 ~~lLAdlGAeVIKVE~p~~GD~~R~~~~~~~~~~s~~f~~~-nr~Krsi~lDLk~~~g~~~l~~Lv~~ADVvien~rp 98 (415)
T TIGR03253 22 TQMLAWLGADVIKIERPGVGDITRGQLRDIPDVDSLYFTML-NCNKRSITLNTKTPEGKEVLEELIKKADVMVENFGP 98 (415)
T ss_pred HHHHHHcCCcEEEeCCCCCCccccccCCCCCCcccHHHHHh-CCCCeEEEeeCCCHHHHHHHHHHHhhCCEEEECCCC
Confidence 467899999998654321 00000 00111111 223456788999999876665555444344455554
No 408
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase. Examples of this enzyme in Actinobacteria have been found to be bifunctional, also possessing phosphoribosylanthranilate isomerase activity ; the trusted cutoff here has now been raised to 275.0 to exclude the bifunctional group, now represented by model TIGR01919. HisA from Lactococcus lactis was reported to be inactive (MEDLINE:93322317).
Probab=69.45 E-value=18 Score=20.46 Aligned_cols=53 Identities=15% Similarity=0.092 Sum_probs=30.6
Q ss_pred HHHHHHcCCe-EEEeecCcch-----HHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCK-VACAEIQKDL-----NEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~-V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
++.+.+.|+. +++++++... -.++...+.+. .........++++.++++.+.+
T Consensus 151 ~~~~~~~g~~~ii~~~~~~~g~~~g~~~~~i~~i~~~-~~ipvia~GGi~~~~di~~~~~ 209 (230)
T TIGR00007 151 AKRLEELGLEGIIYTDISRDGTLSGPNFELTKELVKA-VNVPVIASGGVSSIDDLIALKK 209 (230)
T ss_pred HHHHHhCCCCEEEEEeecCCCCcCCCCHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHH
Confidence 4567788887 5555543321 12233334333 2234567889999999888653
No 409
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=69.37 E-value=11 Score=22.37 Aligned_cols=43 Identities=16% Similarity=0.221 Sum_probs=25.7
Q ss_pred HHHHHHc-CCeEEEeecCcchHHHHHHHHHhhCC--CceeEEEccCC
Q psy12399 2 ALEFARQ-GCKVACAEIQKDLNEETVQMVNQVAP--GAAKGYYCDVG 45 (69)
Q Consensus 2 a~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~ 45 (69)
+..+++. |++|..+..+.+..+...+.+... | .++.+..+|..
T Consensus 77 ~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~-gl~~~v~v~~~D~~ 122 (273)
T PF02353_consen 77 AIYAAERYGCHVTGITLSEEQAEYARERIREA-GLEDRVEVRLQDYR 122 (273)
T ss_dssp HHHHHHHH--EEEEEES-HHHHHHHHHHHHCS-TSSSTEEEEES-GG
T ss_pred HHHHHHHcCcEEEEEECCHHHHHHHHHHHHhc-CCCCceEEEEeecc
Confidence 4567777 999988777777666666677655 4 35656666553
No 410
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=69.18 E-value=12 Score=23.05 Aligned_cols=20 Identities=45% Similarity=0.630 Sum_probs=16.8
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
+|..|++.|..|.+++++.+
T Consensus 35 MA~~La~aG~~V~v~Dr~~~ 54 (342)
T PRK12557 35 MAIEFAEAGHDVVLAEPNRS 54 (342)
T ss_pred HHHHHHhCCCeEEEEECCHH
Confidence 47789999999999988765
No 411
>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed
Probab=69.16 E-value=17 Score=21.87 Aligned_cols=43 Identities=16% Similarity=0.055 Sum_probs=29.8
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCC-ceeEEEccCC
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPG-AAKGYYCDVG 45 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~ 45 (69)
+..+++.|.+|+.++.++...+...+..+.. +. ++.+...|+.
T Consensus 188 sl~la~~~~~V~gvD~s~~av~~A~~n~~~~-~l~~v~~~~~D~~ 231 (315)
T PRK03522 188 GLHCATPGMQLTGIEISAEAIACAKQSAAEL-GLTNVQFQALDST 231 (315)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHHHHHHHHc-CCCceEEEEcCHH
Confidence 4567888888999998877766666655544 43 4667777663
No 412
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=68.80 E-value=12 Score=22.59 Aligned_cols=46 Identities=13% Similarity=-0.046 Sum_probs=26.1
Q ss_pred EEEeecCcchHHHHHHHHHhhCCCceeE---EEccCCCHHHHHHHHHHHHH
Q psy12399 12 VACAEIQKDLNEETVQMVNQVAPGAAKG---YYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 12 V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+.+++.+-.-+.++...+. . +..+.. -.+|++|++.+.+++++..-
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~-~~~v~a~~~~~~Ditd~~~v~~~i~~~~P 51 (281)
T COG1091 3 ILITGANGQLGTELRRALP-G-EFEVIATDRAELDITDPDAVLEVIRETRP 51 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-C-CceEEeccCccccccChHHHHHHHHhhCC
Confidence 4455555555555555553 1 222322 24588888888888777643
No 413
>KOG3957|consensus
Probab=68.53 E-value=22 Score=22.30 Aligned_cols=49 Identities=14% Similarity=0.080 Sum_probs=30.5
Q ss_pred HHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHH
Q psy12399 3 LEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDF 58 (69)
Q Consensus 3 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 58 (69)
-.|+..||+|+-+++..+.. .+.+.. +.+ ....|+-++++.+.+.+.+.
T Consensus 24 MvLaDfGA~V~~Vdr~~~~~---~~~l~r--gk~--~~~ldlk~p~~~~~l~~l~~ 72 (387)
T KOG3957|consen 24 MVLADFGAEVTKVDRKNSND---EDRLNR--GKR--MLVLDLKNPEGTQALRRLCK 72 (387)
T ss_pred hhhhhcCceEEEecCCCCCh---HHHhcC--CCC--ceeeeccCchhhHHHHHHHh
Confidence 35788999999998865542 223321 322 33568888888766554443
No 414
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=68.32 E-value=7.2 Score=22.94 Aligned_cols=23 Identities=9% Similarity=0.192 Sum_probs=16.9
Q ss_pred CHHHHHHcCCeEEEeecCcchHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNE 23 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~ 23 (69)
+++.|++.|.+|.+++++.+..+
T Consensus 17 ~a~~l~~~g~~v~~~d~~~~~~~ 39 (296)
T PRK11559 17 MSKNLLKAGYSLVVYDRNPEAVA 39 (296)
T ss_pred HHHHHHHCCCeEEEEcCCHHHHH
Confidence 36778888988888887755444
No 415
>PLN02858 fructose-bisphosphate aldolase
Probab=68.22 E-value=15 Score=26.90 Aligned_cols=26 Identities=35% Similarity=0.399 Sum_probs=21.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
||++|++.|+.|.+++++.++.+.+.
T Consensus 19 mA~~L~~~G~~v~v~dr~~~~~~~l~ 44 (1378)
T PLN02858 19 LASSLLRSGFKVQAFEISTPLMEKFC 44 (1378)
T ss_pred HHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence 57899999999999999877666544
No 416
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=68.06 E-value=6.3 Score=23.63 Aligned_cols=25 Identities=16% Similarity=0.218 Sum_probs=19.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~ 25 (69)
++++|...|..|+.++++....+++
T Consensus 15 ~v~rl~~~ghdvV~yD~n~~av~~~ 39 (300)
T COG1023 15 LVRRLLDGGHDVVGYDVNQTAVEEL 39 (300)
T ss_pred HHHHHHhCCCeEEEEcCCHHHHHHH
Confidence 4789999999999998876554443
No 417
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=68.04 E-value=25 Score=21.45 Aligned_cols=53 Identities=11% Similarity=0.065 Sum_probs=30.9
Q ss_pred HHHHHHcCCeEEEeec---CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEI---QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
+..+++.|.+++.++. +.+...+..+.+++. ...+..+..++.+.+....+.+
T Consensus 99 ~~~l~eagv~~I~vd~~~G~~~~~~~~i~~ik~~-~p~v~Vi~G~v~t~~~A~~l~~ 154 (325)
T cd00381 99 AEALVEAGVDVIVIDSAHGHSVYVIEMIKFIKKK-YPNVDVIAGNVVTAEAARDLID 154 (325)
T ss_pred HHHHHhcCCCEEEEECCCCCcHHHHHHHHHHHHH-CCCceEEECCCCCHHHHHHHHh
Confidence 4567788888765432 223344555666554 3334444567777777766543
No 418
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=67.31 E-value=8.1 Score=22.92 Aligned_cols=28 Identities=7% Similarity=0.083 Sum_probs=20.6
Q ss_pred HHHHHHcCCe-EEEeecCcchHHHHHHHH
Q psy12399 2 ALEFARQGCK-VACAEIQKDLNEETVQMV 29 (69)
Q Consensus 2 a~~la~~G~~-V~~~~~~~~~~~~~~~~~ 29 (69)
+..|++.|+. |.+++|+.++.+.+.+.+
T Consensus 138 ~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 138 AAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred HHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 5667888985 888899877777665543
No 419
>PRK00748 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated
Probab=67.23 E-value=21 Score=20.23 Aligned_cols=54 Identities=20% Similarity=0.232 Sum_probs=30.0
Q ss_pred HHHHHHcCCe-EEEeecCcchH-----HHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHH
Q psy12399 2 ALEFARQGCK-VACAEIQKDLN-----EETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 2 a~~la~~G~~-V~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
++.+.+.|+. +++++++.+.. -+....+.+. -........++++.++++.+.+.
T Consensus 152 ~~~~~~~g~~~ii~~~~~~~g~~~G~d~~~i~~l~~~-~~ipvia~GGi~~~~di~~~~~~ 211 (233)
T PRK00748 152 AKRFEDAGVKAIIYTDISRDGTLSGPNVEATRELAAA-VPIPVIASGGVSSLDDIKALKGL 211 (233)
T ss_pred HHHHHhcCCCEEEEeeecCcCCcCCCCHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHc
Confidence 3455666777 56665543210 2333334333 22334667889999998887653
No 420
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=67.22 E-value=8.9 Score=23.29 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=17.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~ 24 (69)
++..|.++|+.|.++++......+
T Consensus 175 mA~~L~~~gatVtv~~~~t~~l~e 198 (301)
T PRK14194 175 MAALLLQAHCSVTVVHSRSTDAKA 198 (301)
T ss_pred HHHHHHHCCCEEEEECCCCCCHHH
Confidence 467888999999888665544333
No 421
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=67.18 E-value=20 Score=19.92 Aligned_cols=57 Identities=7% Similarity=-0.111 Sum_probs=30.0
Q ss_pred HHHHHcCCeEEE--eecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 3 LEFARQGCKVAC--AEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 3 ~~la~~G~~V~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
.....+|.++++ +-.+.+....+.+.+++. |-++..+.+.+....++....+...+.
T Consensus 87 ~~a~~~~~nii~E~tl~~~~~~~~~~~~~k~~-GY~v~l~~v~~~~e~s~~rv~~R~~~~ 145 (199)
T PF06414_consen 87 EYAIENRYNIIFEGTLSNPSKLRKLIREAKAA-GYKVELYYVAVPPELSIERVRQRYEEG 145 (199)
T ss_dssp HHHHHCT--EEEE--TTSSHHHHHHHHHHHCT-T-EEEEEEE---HHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEecCCCChhHHHHHHHHHHcC-CceEEEEEEECCHHHHHHHHHHHHHcc
Confidence 345567888876 233445555577777766 666666666665566666655554433
No 422
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=66.96 E-value=15 Score=22.36 Aligned_cols=54 Identities=11% Similarity=0.048 Sum_probs=33.5
Q ss_pred HHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHH
Q psy12399 3 LEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 3 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 60 (69)
.-|-++|+-|+++..+.++.+....+- -..+..+..|..++.++...+....+.
T Consensus 22 ~DLeRRGFIV~v~~~~~ed~~~ve~e~----~~dI~~L~ld~~~~~~~~~~l~~f~~~ 75 (299)
T PF08643_consen 22 LDLERRGFIVYVTVSSAEDEKYVESED----RPDIRPLWLDDSDPSSIHASLSRFASL 75 (299)
T ss_pred HHHhhCCeEEEEEeCCHHHHHHHHhcc----CCCCCCcccCCCCCcchHHHHHHHHHH
Confidence 345578999988776655433322221 234666777887777777777666544
No 423
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=66.80 E-value=13 Score=22.54 Aligned_cols=20 Identities=30% Similarity=0.446 Sum_probs=17.2
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
||..|+..|+.|.+++.+.+
T Consensus 5 iA~~~a~~G~~V~l~d~~~~ 24 (314)
T PRK08269 5 IALAFAFAGHDVTLIDFKPR 24 (314)
T ss_pred HHHHHHhCCCeEEEEeCCcc
Confidence 57789999999999988764
No 424
>PRK05398 formyl-coenzyme A transferase; Provisional
Probab=66.57 E-value=30 Score=21.84 Aligned_cols=67 Identities=12% Similarity=0.016 Sum_probs=35.8
Q ss_pred HHHHHHcCCeEEEeecCc--chHHH--------HHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHhhcccCCCC
Q psy12399 2 ALEFARQGCKVACAEIQK--DLNEE--------TVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKILSYCTPRP 69 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~--~~~~~--------~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~~~~~ 69 (69)
++.|+..||.||=+.... +.... ....+... ...-..+..|+.+++..+.+.+-+...-....|+||
T Consensus 23 ~~lLAdlGA~VIKVE~p~~GD~~R~~~~~~~~~~s~~f~~~-NrgKrsi~lDLk~~eGr~~l~~Lv~~ADVvien~rp 99 (416)
T PRK05398 23 TQLLAWFGADVIKVERPGVGDVTRNQLRDIPDVDSLYFTML-NSNKRSITLDTKTPEGKEVLEKLIREADVLVENFGP 99 (416)
T ss_pred HHHHHHcCCCEEEecCCCCCCcccccCCCCCCcccHHHHHc-CCCCeEEEeeCCCHHHHHHHHHHHhcCCEEEECCCc
Confidence 467899999998653211 00000 00111111 223456788999999876655555443344455555
No 425
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=66.32 E-value=8.5 Score=22.77 Aligned_cols=26 Identities=23% Similarity=0.259 Sum_probs=19.1
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
++..|++.|..|.+++++.+..+.+.
T Consensus 16 ~a~~L~~~g~~V~~~~r~~~~~~~~~ 41 (325)
T PRK00094 16 LAIVLARNGHDVTLWARDPEQAAEIN 41 (325)
T ss_pred HHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 46788899999999888765544433
No 426
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=65.85 E-value=9.5 Score=24.45 Aligned_cols=28 Identities=21% Similarity=0.216 Sum_probs=20.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQM 28 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~ 28 (69)
++..|++.|++|.+++++.++.+.+.+.
T Consensus 347 ia~~L~~~G~~V~i~~R~~~~~~~la~~ 374 (477)
T PRK09310 347 IATTLARAGAELLIFNRTKAHAEALASR 374 (477)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 3677889999988888876655554443
No 427
>cd01874 Cdc42 Cdc42 subfamily. Cdc42 is an essential GTPase that belongs to the Rho family of Ras-like GTPases. These proteins act as molecular switches by responding to exogenous and/or endogenous signals and relaying those signals to activate downstream components of a biological pathway. Cdc42 transduces signals to the actin cytoskeleton to initiate and maintain polarized growth and to mitogen-activated protein morphogenesis. In the budding yeast Saccharomyces cerevisiae, Cdc42 plays an important role in multiple actin-dependent morphogenetic events such as bud emergence, mating-projection formation, and pseudohyphal growth. In mammalian cells, Cdc42 regulates a variety of actin-dependent events and induces the JNK/SAPK protein kinase cascade, which leads to the activation of transcription factors within the nucleus. Cdc42 mediates these processes through interactions with a myriad of downstream effectors, whose number and regulation we are just starting to understand. In addi
Probab=65.43 E-value=20 Score=19.34 Aligned_cols=23 Identities=9% Similarity=-0.234 Sum_probs=16.4
Q ss_pred CCceeEEEccCCCHHHHHHHHHH
Q psy12399 34 PGAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 34 ~~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
+..+..+..|++++++.+.+.+.
T Consensus 72 ~a~~~ilv~d~~~~~s~~~~~~~ 94 (175)
T cd01874 72 QTDVFLVCFSVVSPSSFENVKEK 94 (175)
T ss_pred cCCEEEEEEECCCHHHHHHHHHH
Confidence 45677788899988877765443
No 428
>cd00452 KDPG_aldolase KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.
Probab=65.42 E-value=21 Score=19.74 Aligned_cols=51 Identities=14% Similarity=0.044 Sum_probs=24.1
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLR 53 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~ 53 (69)
++.+.+.|.+++-+..+.....+....+.+.++ .+..-...+.+.++++.+
T Consensus 22 ~~~l~~~G~~~vev~~~~~~~~~~i~~l~~~~~-~~~iGag~v~~~~~~~~a 72 (190)
T cd00452 22 AEALIEGGIRAIEITLRTPGALEAIRALRKEFP-EALIGAGTVLTPEQADAA 72 (190)
T ss_pred HHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC-CCEEEEEeCCCHHHHHHH
Confidence 456667777765443333333334444444312 232333345555555544
No 429
>KOG2730|consensus
Probab=65.42 E-value=12 Score=22.20 Aligned_cols=46 Identities=17% Similarity=0.042 Sum_probs=30.7
Q ss_pred HHHHHcCCeEEEeecCcchHHHHHHHHHhhCC--CceeEEEccCCCHHH
Q psy12399 3 LEFARQGCKVACAEIQKDLNEETVQMVNQVAP--GAAKGYYCDVGNVDS 49 (69)
Q Consensus 3 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 49 (69)
..|+..|+.|+..+.+..+..=...-++-. | .++.++++|+-+..+
T Consensus 110 iqfa~~~~~VisIdiDPikIa~AkhNaeiY-GI~~rItFI~GD~ld~~~ 157 (263)
T KOG2730|consen 110 IQFALQGPYVIAIDIDPVKIACARHNAEVY-GVPDRITFICGDFLDLAS 157 (263)
T ss_pred HHHHHhCCeEEEEeccHHHHHHHhccceee-cCCceeEEEechHHHHHH
Confidence 468889999998888776655444443333 4 477888888755443
No 430
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=65.42 E-value=11 Score=22.52 Aligned_cols=30 Identities=13% Similarity=0.365 Sum_probs=22.5
Q ss_pred HHHHHHcCCe-EEEeecCcchHHHHHHHHHh
Q psy12399 2 ALEFARQGCK-VACAEIQKDLNEETVQMVNQ 31 (69)
Q Consensus 2 a~~la~~G~~-V~~~~~~~~~~~~~~~~~~~ 31 (69)
+..|++.|+. +.+++|+.++.+.+.+.+..
T Consensus 143 ~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~ 173 (283)
T PRK14027 143 AYALVTHGVQKLQVADLDTSRAQALADVINN 173 (283)
T ss_pred HHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 5678889974 77889988877777766643
No 431
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=65.38 E-value=24 Score=20.27 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=22.8
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLR 53 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~ 53 (69)
++.+.+.|.+++=...+.+...+....+++.++ ++..-..=+.+.++.+.+
T Consensus 33 ~~al~~~Gi~~iEitl~~~~~~~~I~~l~~~~p-~~~IGAGTVl~~~~a~~a 83 (212)
T PRK05718 33 AKALVAGGLPVLEVTLRTPAALEAIRLIAKEVP-EALIGAGTVLNPEQLAQA 83 (212)
T ss_pred HHHHHHcCCCEEEEecCCccHHHHHHHHHHHCC-CCEEEEeeccCHHHHHHH
Confidence 455666666654222233334444444444322 333333334555554443
No 432
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=65.35 E-value=9.5 Score=22.39 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=17.0
Q ss_pred CHHHHHHcCCeEEEeecCcchHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~ 24 (69)
++..|.+.|.+|.+++++.+..+.
T Consensus 15 la~~L~~~g~~V~~~d~~~~~~~~ 38 (279)
T PRK07417 15 LGLDLRSLGHTVYGVSRRESTCER 38 (279)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHH
Confidence 366778888888888877554443
No 433
>TIGR00095 RNA methyltransferase, RsmD family. This model represents a family of uncharacterized bacterial proteins. Members are present in nearly every complete bacterial genome, always in a single copy. PSI-BLAST analysis shows homology to several families of SAM-dependent methyltransferases, including ribosomal RNA adenine dimethylases.
Probab=65.28 E-value=22 Score=19.81 Aligned_cols=42 Identities=12% Similarity=0.016 Sum_probs=26.5
Q ss_pred HHHHHHcCC-eEEEeecCcchHHHHHHHHHhhCC--CceeEEEccC
Q psy12399 2 ALEFARQGC-KVACAEIQKDLNEETVQMVNQVAP--GAAKGYYCDV 44 (69)
Q Consensus 2 a~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv 44 (69)
...+++.|+ .|+.++.+....+.+..-++.. + .++.++..|+
T Consensus 64 glea~srga~~v~~vE~~~~a~~~~~~N~~~~-~~~~~~~~~~~D~ 108 (189)
T TIGR00095 64 GEEALSRGAKVAFLEEDDRKANQTLKENLALL-KSGEQAEVVRNSA 108 (189)
T ss_pred HHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh-CCcccEEEEehhH
Confidence 345677888 5777888776665555555443 3 2456677776
No 434
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=65.16 E-value=13 Score=21.49 Aligned_cols=15 Identities=7% Similarity=0.062 Sum_probs=11.5
Q ss_pred CHHHHHHcCCeEEEe
Q psy12399 1 MALEFARQGCKVACA 15 (69)
Q Consensus 1 ia~~la~~G~~V~~~ 15 (69)
+++.|.+.|..|++.
T Consensus 13 l~~~L~~~g~~v~~~ 27 (306)
T PLN02725 13 IVRKLEALGFTNLVL 27 (306)
T ss_pred HHHHHHhCCCcEEEe
Confidence 467888999987654
No 435
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=64.66 E-value=20 Score=22.66 Aligned_cols=18 Identities=11% Similarity=0.104 Sum_probs=14.5
Q ss_pred CHHHHHHcCCeEEEeecC
Q psy12399 1 MALEFARQGCKVACAEIQ 18 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~ 18 (69)
+++.|++.|++|+++++.
T Consensus 136 Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 136 LVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred HHHHHHHCCCEEEEEeCC
Confidence 367899999999888764
No 436
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=64.54 E-value=23 Score=19.86 Aligned_cols=57 Identities=7% Similarity=-0.176 Sum_probs=35.6
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEcc-CCCHHHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCD-VGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~~~~~v~~~~~~ 60 (69)
+..|-.+|++|+-.+.+-+ .+++.+.+.+. +.++..+.+= .+....+.++++.+.+.
T Consensus 105 ~~~l~~~G~~vi~LG~~vp-~e~~v~~~~~~-~pd~v~lS~~~~~~~~~~~~~i~~l~~~ 162 (197)
T TIGR02370 105 VTMLRANGFDVIDLGRDVP-IDTVVEKVKKE-KPLMLTGSALMTTTMYGQKDINDKLKEE 162 (197)
T ss_pred HHHHHhCCcEEEECCCCCC-HHHHHHHHHHc-CCCEEEEccccccCHHHHHHHHHHHHHc
Confidence 3456678999987665544 35556666655 5666665543 34556677777776665
No 437
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=64.31 E-value=25 Score=20.12 Aligned_cols=47 Identities=17% Similarity=0.088 Sum_probs=24.2
Q ss_pred HHHHHHcCC--eEEEeecCcch---HHHHHHHHHhh---------CCCceeEEEccCCCHH
Q psy12399 2 ALEFARQGC--KVACAEIQKDL---NEETVQMVNQV---------APGAAKGYYCDVGNVD 48 (69)
Q Consensus 2 a~~la~~G~--~V~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~Dv~~~~ 48 (69)
.++|++.+. +|++.-|..+. .+.+.+.+.+. ...++.++.+|++.+.
T Consensus 13 l~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~ 73 (249)
T PF07993_consen 13 LEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPN 73 (249)
T ss_dssp HHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGG
T ss_pred HHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccc
Confidence 456777776 78776665432 23332222111 0357899999999854
No 438
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=64.13 E-value=20 Score=19.01 Aligned_cols=57 Identities=9% Similarity=-0.106 Sum_probs=33.9
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEcc-CCCHHHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCD-VGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~~~~~v~~~~~~ 60 (69)
+..|-.+|++|+-.+.+-+ .+++.+...+. ..++..+.+- -+....+.++++.+.+.
T Consensus 24 ~~~lr~~G~eVi~LG~~vp-~e~i~~~a~~~-~~d~V~lS~~~~~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 24 DRALTEAGFEVINLGVMTS-QEEFIDAAIET-DADAILVSSLYGHGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHHCCCEEEECCCCCC-HHHHHHHHHHc-CCCEEEEcCccccCHHHHHHHHHHHHhc
Confidence 3456678999887655433 34444555444 5556555543 34566777777776655
No 439
>PRK12320 hypothetical protein; Provisional
Probab=63.73 E-value=19 Score=24.51 Aligned_cols=37 Identities=8% Similarity=0.021 Sum_probs=23.4
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNV 47 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 47 (69)
+++.|.+.|++|+.+++.... . . ...+.++.+|++++
T Consensus 16 La~~Ll~~G~~Vi~ldr~~~~-------~--~-~~~ve~v~~Dl~d~ 52 (699)
T PRK12320 16 VTRQLIAAGHTVSGIAQHPHD-------A--L-DPRVDYVCASLRNP 52 (699)
T ss_pred HHHHHHhCCCEEEEEeCChhh-------c--c-cCCceEEEccCCCH
Confidence 367888999999888764321 0 0 12345666777765
No 440
>PF02579 Nitro_FeMo-Co: Dinitrogenase iron-molybdenum cofactor; InterPro: IPR003731 This entry represents several Nif (B, X and Y) proteins, which are involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing bacteria. The nitrogenase complex catalyses the reduction of atmospheric dinitrogen to ammonia, and is composed of an iron metalloprotein (dinitrogenase reductase; homodimer of NifH; IPR000392 from INTERPRO) and a Fe-Mo metalloprotein (dinitrogenase; heterotetramer of NifD and NifK; IPR000318 from INTERPRO). The pathway for the synthesis of the Fe-Mo cofactor involves several proteins, including NifB, NifE, NifH, NifN, NifQ, NifV and NifX. NifB appears to be an iron-sulphur source for FeMo-co biosynthesis, while NifX may be associated with the mature FeMo-co, in particular with the addition of homocitrate during the last step of biosynthesis []. The NifX protein shows sequence similarity with the C terminus of NifB [], as well as to the conserved protein MTH1175 from the archaeon Methanobacterium thermoautotrophicum, which displays a ribonuclease H-like motif of three layers, alpha/beta/alpha, with a single mixed beta-sheet [].; PDB: 2QTD_A 2KLA_A 1EO1_A 1P90_A 1RDU_A 2YX6_D 1O13_A 1T3V_A 2RE2_B 2WFB_A.
Probab=63.65 E-value=15 Score=17.46 Aligned_cols=32 Identities=16% Similarity=0.076 Sum_probs=19.0
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCce
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAA 37 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (69)
++.|...|++++++..= .......+.+. |.++
T Consensus 46 ~~~l~~~~v~~li~~~i---G~~~~~~L~~~-gI~v 77 (94)
T PF02579_consen 46 AKFLAEEGVDVLICGGI---GEGAFRALKEA-GIKV 77 (94)
T ss_dssp HHHHHHTTESEEEESCS---CHHHHHHHHHT-TSEE
T ss_pred HHHHHHcCCCEEEEeCC---CHHHHHHHHHC-CCEE
Confidence 46677788888776442 34444555555 5443
No 441
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=63.38 E-value=9.4 Score=23.54 Aligned_cols=26 Identities=23% Similarity=0.235 Sum_probs=20.3
Q ss_pred CHHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 1 MALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
+|..|+++|..|.++.|+++...++.
T Consensus 16 LA~~la~ng~~V~lw~r~~~~~~~i~ 41 (329)
T COG0240 16 LAKVLARNGHEVRLWGRDEEIVAEIN 41 (329)
T ss_pred HHHHHHhcCCeeEEEecCHHHHHHHH
Confidence 46789999999999999876655533
No 442
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=63.29 E-value=21 Score=18.85 Aligned_cols=57 Identities=16% Similarity=0.053 Sum_probs=32.4
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEc-cCCCHHHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYC-DVGNVDSVDLRIGLDFRK 60 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~~~~~~~~~v~~~~~~ 60 (69)
+..|...|+.|+-.+...+. ++..+...+. +.++..+.. +-+..+.+..+++.+.+.
T Consensus 23 ~~~l~~~GfeVi~lg~~~s~-e~~v~aa~e~-~adii~iSsl~~~~~~~~~~~~~~L~~~ 80 (132)
T TIGR00640 23 ATAYADLGFDVDVGPLFQTP-EEIARQAVEA-DVHVVGVSSLAGGHLTLVPALRKELDKL 80 (132)
T ss_pred HHHHHhCCcEEEECCCCCCH-HHHHHHHHHc-CCCEEEEcCchhhhHHHHHHHHHHHHhc
Confidence 34566788888876544322 3344444444 556655544 334556677777776654
No 443
>PRK14967 putative methyltransferase; Provisional
Probab=63.17 E-value=25 Score=19.84 Aligned_cols=41 Identities=12% Similarity=-0.010 Sum_probs=21.7
Q ss_pred HHHHHcCC-eEEEeecCcchHHHHHHHHHhhCCCceeEEEccC
Q psy12399 3 LEFARQGC-KVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDV 44 (69)
Q Consensus 3 ~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 44 (69)
..++..|+ +|+.++.+..........+... +.++.+...|+
T Consensus 52 ~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~-~~~~~~~~~d~ 93 (223)
T PRK14967 52 VAAAAAGAGSVTAVDISRRAVRSARLNALLA-GVDVDVRRGDW 93 (223)
T ss_pred HHHHHcCCCeEEEEECCHHHHHHHHHHHHHh-CCeeEEEECch
Confidence 44566676 7778888766555444433333 33333444443
No 444
>PLN02206 UDP-glucuronate decarboxylase
Probab=63.00 E-value=23 Score=22.47 Aligned_cols=18 Identities=11% Similarity=0.095 Sum_probs=14.2
Q ss_pred CHHHHHHcCCeEEEeecC
Q psy12399 1 MALEFARQGCKVACAEIQ 18 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~ 18 (69)
+++.|+++|++|+++++.
T Consensus 135 Lv~~Ll~~G~~V~~ld~~ 152 (442)
T PLN02206 135 LVDRLMARGDSVIVVDNF 152 (442)
T ss_pred HHHHHHHCcCEEEEEeCC
Confidence 467899999999887653
No 445
>PRK07201 short chain dehydrogenase; Provisional
Probab=62.88 E-value=41 Score=22.08 Aligned_cols=44 Identities=9% Similarity=0.013 Sum_probs=25.8
Q ss_pred HHHHH--HcCCeEEEeecCcchHHHHHHHHHhhCC-CceeEEEccCCCH
Q psy12399 2 ALEFA--RQGCKVACAEIQKDLNEETVQMVNQVAP-GAAKGYYCDVGNV 47 (69)
Q Consensus 2 a~~la--~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~ 47 (69)
++.|+ ..|.+|.+++|+... .......... + .++.++.+|++++
T Consensus 17 v~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~-~~~~v~~~~~Dl~~~ 63 (657)
T PRK07201 17 VSRLLDRRREATVHVLVRRQSL-SRLEALAAYW-GADRVVPLVGDLTEP 63 (657)
T ss_pred HHHHHhcCCCCEEEEEECcchH-HHHHHHHHhc-CCCcEEEEecccCCc
Confidence 56777 588999888775332 2222221111 2 4577788898874
No 446
>cd04174 Rnd1_Rho6 Rnd1/Rho6 subfamily. Rnd1/Rho6 is a member of the novel Rho subfamily Rnd, together with Rnd2/Rho7 and Rnd3/RhoE/Rho8. Rnd1/Rho6 binds GTP but does not hydrolyze it to GDP, indicating that it is constitutively active. In rat, Rnd1/Rho6 is highly expressed in the cerebral cortex and hippocampus during synapse formation, and plays a role in spine formation. Rnd1/Rho6 is also expressed in the liver and in endothelial cells, and is upregulated in uterine myometrial cells during pregnancy. Like Rnd3/RhoE/Rho8, Rnd1/Rho6 is believed to function as an antagonist to RhoA. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Rho proteins. Due to the presence of truncated sequences in this CD, the lipid modification site is not available for annotation.
Probab=62.78 E-value=28 Score=20.14 Aligned_cols=26 Identities=15% Similarity=0.018 Sum_probs=18.6
Q ss_pred CCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 34 PGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 34 ~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+..+..+..|++++++...++.....
T Consensus 84 ~ad~vIlVyDit~~~Sf~~~~~~w~~ 109 (232)
T cd04174 84 DSDAVLLCFDISRPETVDSALKKWKA 109 (232)
T ss_pred CCcEEEEEEECCChHHHHHHHHHHHH
Confidence 56777888899999988765443333
No 447
>KOG2728|consensus
Probab=62.68 E-value=9.6 Score=22.86 Aligned_cols=18 Identities=22% Similarity=0.141 Sum_probs=14.9
Q ss_pred HHHHHHcCCeEEEeecCc
Q psy12399 2 ALEFARQGCKVACAEIQK 19 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~ 19 (69)
|+.|+++|+.|+...|+.
T Consensus 66 AE~Fl~agYaVIFl~R~~ 83 (302)
T KOG2728|consen 66 AEYFLAAGYAVIFLYRER 83 (302)
T ss_pred HHHHHhCCceEEEEeecc
Confidence 678999999999877643
No 448
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=62.55 E-value=14 Score=21.32 Aligned_cols=21 Identities=14% Similarity=0.044 Sum_probs=14.7
Q ss_pred HHHHHHcCCeEEEeecCcchH
Q psy12399 2 ALEFARQGCKVACAEIQKDLN 22 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~ 22 (69)
.+...++|..|...-|++.+.
T Consensus 17 ~~EA~~RGHeVTAivRn~~K~ 37 (211)
T COG2910 17 LKEALKRGHEVTAIVRNASKL 37 (211)
T ss_pred HHHHHhCCCeeEEEEeChHhc
Confidence 455667899988777766554
No 449
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=62.45 E-value=20 Score=18.37 Aligned_cols=53 Identities=15% Similarity=0.071 Sum_probs=23.5
Q ss_pred HHHHHcCCeEEEeecCc-c-----hHHHHHHHHHhhCCCceeEEEccCC--CHHHHHHHHHH
Q psy12399 3 LEFARQGCKVACAEIQK-D-----LNEETVQMVNQVAPGAAKGYYCDVG--NVDSVDLRIGL 56 (69)
Q Consensus 3 ~~la~~G~~V~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~~~~~v~~ 56 (69)
..+++.|.+.++.-|.. + ......+..++. |-...+++.+-. ..+++..+.+.
T Consensus 21 ~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~-Gl~y~~iPv~~~~~~~~~v~~f~~~ 81 (110)
T PF04273_consen 21 AQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEAL-GLQYVHIPVDGGAITEEDVEAFADA 81 (110)
T ss_dssp HHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHC-T-EEEE----TTT--HHHHHHHHHH
T ss_pred HHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHc-CCeEEEeecCCCCCCHHHHHHHHHH
Confidence 57889999987765532 1 112233444455 767766666543 34566555443
No 450
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=62.42 E-value=28 Score=20.00 Aligned_cols=53 Identities=13% Similarity=0.074 Sum_probs=28.8
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCC--ceeEEEccCCCHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPG--AAKGYYCDVGNVDSVDLRI 54 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~v 54 (69)
++.|.+.|.+++=+..+.+...+..+.+.+.++. .+..=..=|.+.++++.++
T Consensus 31 ~~al~~~Gi~~iEit~~~~~a~~~i~~l~~~~~~~p~~~vGaGTV~~~~~~~~a~ 85 (213)
T PRK06552 31 SLAVIKGGIKAIEVTYTNPFASEVIKELVELYKDDPEVLIGAGTVLDAVTARLAI 85 (213)
T ss_pred HHHHHHCCCCEEEEECCCccHHHHHHHHHHHcCCCCCeEEeeeeCCCHHHHHHHH
Confidence 5677778877653222233444445555443232 3444455677777776654
No 451
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=62.28 E-value=12 Score=21.86 Aligned_cols=22 Identities=14% Similarity=0.137 Sum_probs=16.5
Q ss_pred HHHHHHcCCeEEEeecCcchHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNE 23 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~ 23 (69)
+..|++.|.+|.+++++.+..+
T Consensus 16 a~~L~~~g~~V~~~~r~~~~~~ 37 (304)
T PRK06522 16 GAALAQAGHDVTLVARRGAHLD 37 (304)
T ss_pred HHHHHhCCCeEEEEECChHHHH
Confidence 5678889999999888654433
No 452
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=61.94 E-value=12 Score=19.48 Aligned_cols=22 Identities=23% Similarity=0.176 Sum_probs=16.5
Q ss_pred HHHHHHcCCeEEEeecCcchHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~ 24 (69)
|.+|.+.|.+|.++.+.. ..+.
T Consensus 14 a~~L~~~g~~V~l~~r~~-~~~~ 35 (151)
T PF02558_consen 14 AARLAQAGHDVTLVSRSP-RLEA 35 (151)
T ss_dssp HHHHHHTTCEEEEEESHH-HHHH
T ss_pred HHHHHHCCCceEEEEccc-cHHh
Confidence 567888999999988865 4343
No 453
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=61.90 E-value=15 Score=16.83 Aligned_cols=19 Identities=26% Similarity=0.343 Sum_probs=15.0
Q ss_pred HHHHHHcCCeEEEeecCcc
Q psy12399 2 ALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~ 20 (69)
|..|.+.|.+|.+..++..
T Consensus 12 A~~L~~~g~~v~v~E~~~~ 30 (68)
T PF13450_consen 12 AYYLAKAGYRVTVFEKNDR 30 (68)
T ss_dssp HHHHHHTTSEEEEEESSSS
T ss_pred HHHHHHCCCcEEEEecCcc
Confidence 5778899999999876543
No 454
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=61.56 E-value=12 Score=22.27 Aligned_cols=22 Identities=18% Similarity=0.161 Sum_probs=17.0
Q ss_pred CHHHHHHcCCeEEEeecCcchH
Q psy12399 1 MALEFARQGCKVACAEIQKDLN 22 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~~~ 22 (69)
+++.|...|++|.+++|+.+..
T Consensus 166 vA~~L~~~G~~V~v~~R~~~~~ 187 (287)
T TIGR02853 166 IARTFSALGARVFVGARSSADL 187 (287)
T ss_pred HHHHHHHCCCEEEEEeCCHHHH
Confidence 4678888999999888876543
No 455
>smart00650 rADc Ribosomal RNA adenine dimethylases.
Probab=61.19 E-value=24 Score=18.95 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=24.3
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCC
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVG 45 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 45 (69)
+..+++.+.+|+.++.++...+.+.+.+.. ..++.++..|+.
T Consensus 28 t~~l~~~~~~v~~vE~~~~~~~~~~~~~~~--~~~v~ii~~D~~ 69 (169)
T smart00650 28 TEELLERAARVTAIEIDPRLAPRLREKFAA--ADNLTVIHGDAL 69 (169)
T ss_pred HHHHHhcCCeEEEEECCHHHHHHHHHHhcc--CCCEEEEECchh
Confidence 456777788888888876554444433322 124555555553
No 456
>PRK06849 hypothetical protein; Provisional
Probab=61.17 E-value=36 Score=20.94 Aligned_cols=20 Identities=30% Similarity=0.253 Sum_probs=16.2
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
+++.|.+.|++|++++.+..
T Consensus 20 iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 20 LARLFHNAGHTVILADSLKY 39 (389)
T ss_pred HHHHHHHCCCEEEEEeCCch
Confidence 47889999999998877643
No 457
>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis]
Probab=61.09 E-value=32 Score=20.52 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=25.7
Q ss_pred CHHHHHHcCC--eEEEeecCcchHHHHHHHHHhhCC-CceeEEEccC
Q psy12399 1 MALEFARQGC--KVACAEIQKDLNEETVQMVNQVAP-GAAKGYYCDV 44 (69)
Q Consensus 1 ia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv 44 (69)
||..++.++. +|+.+|.+...++-...-.... + .++..+..|+
T Consensus 124 iai~la~~~~~~~V~a~Dis~~Al~~A~~Na~~~-~l~~~~~~~~dl 169 (280)
T COG2890 124 IAIALAKEGPDAEVIAVDISPDALALARENAERN-GLVRVLVVQSDL 169 (280)
T ss_pred HHHHHHhhCcCCeEEEEECCHHHHHHHHHHHHHc-CCccEEEEeeec
Confidence 3566777765 7888898877766555555544 4 3333443343
No 458
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=61.09 E-value=29 Score=19.76 Aligned_cols=12 Identities=8% Similarity=0.138 Sum_probs=6.7
Q ss_pred HHHHHHcCCeEE
Q psy12399 2 ALEFARQGCKVA 13 (69)
Q Consensus 2 a~~la~~G~~V~ 13 (69)
++.+++.|.+++
T Consensus 28 ~~a~~~gGi~~i 39 (206)
T PRK09140 28 VGALIEAGFRAI 39 (206)
T ss_pred HHHHHHCCCCEE
Confidence 455566666654
No 459
>TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase. This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM.
Probab=60.76 E-value=28 Score=19.50 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=24.8
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCC--CceeEEEcc
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAP--GAAKGYYCD 43 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D 43 (69)
+..+++.+.+|+.++.+++......+.+... + .++.+..+|
T Consensus 70 ~~~la~~~~~v~gvD~s~~~i~~a~~~~~~~-~~~~~i~~~~~d 112 (219)
T TIGR02021 70 SIELAKRGAIVKAVDISEQMVQMARNRAQGR-DVAGNVEFEVND 112 (219)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCCceEEEECC
Confidence 4567778888888888776665555554432 2 134454444
No 460
>COG2927 HolC DNA polymerase III, chi subunit [DNA replication, recombination, and repair]
Probab=60.75 E-value=16 Score=19.85 Aligned_cols=28 Identities=18% Similarity=0.059 Sum_probs=19.5
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMV 29 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~ 29 (69)
+++....|.+|++.+.+....+.+-+.+
T Consensus 22 ~~k~~~~G~rvlI~~~d~~q~e~LD~~L 49 (144)
T COG2927 22 AEKAWRSGWRVLIQCEDEAQAEALDEHL 49 (144)
T ss_pred HHHHHHcCCeEEEEeCCHHHHHHHHHhh
Confidence 4566678999988877766666655554
No 461
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed
Probab=60.61 E-value=43 Score=21.62 Aligned_cols=53 Identities=11% Similarity=0.073 Sum_probs=33.4
Q ss_pred HHHHHHcCCeEEEeecC---cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQ---KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
++.+.+.|.++++++.. ....-+..+.++.. ...+..+..++.+.++...+++
T Consensus 233 a~~L~~agvdvivvD~a~g~~~~vl~~i~~i~~~-~p~~~vi~g~v~t~e~a~~l~~ 288 (486)
T PRK05567 233 AEALVEAGVDVLVVDTAHGHSEGVLDRVREIKAK-YPDVQIIAGNVATAEAARALIE 288 (486)
T ss_pred HHHHHHhCCCEEEEECCCCcchhHHHHHHHHHhh-CCCCCEEEeccCCHHHHHHHHH
Confidence 56788889998776532 12234445555554 2345555688888888888764
No 462
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=60.39 E-value=9 Score=20.54 Aligned_cols=17 Identities=35% Similarity=0.495 Sum_probs=11.3
Q ss_pred HHHHHHcCCeEEEeecC
Q psy12399 2 ALEFARQGCKVACAEIQ 18 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~ 18 (69)
|..|++.|.+|.++|.+
T Consensus 21 A~~la~~g~~vllvD~D 37 (169)
T cd02037 21 ALALAKLGYKVGLLDAD 37 (169)
T ss_pred HHHHHHcCCcEEEEeCC
Confidence 55677777777766543
No 463
>TIGR03197 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain. In Escherichia coli, the protein previously designated YfcK is now identified as the bifunctional enzyme MnmC. It acts, following the action of the heterotetramer of GidA and MnmE, in the modification of U-34 of certain tRNA to 5-methylaminomethyl-2-thiouridine (mnm5s2U). In other bacterial, the corresponding proteins are usually but always found as a single polypeptide chain, but occasionally as the product of tandem genes. This model represents the C-terminal region of the multifunctional protein.
Probab=60.19 E-value=11 Score=22.95 Aligned_cols=18 Identities=33% Similarity=0.420 Sum_probs=15.4
Q ss_pred CHHHHHHcCCeEEEeecC
Q psy12399 1 MALEFARQGCKVACAEIQ 18 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~ 18 (69)
+|.+|++.|.+|++++++
T Consensus 1 ~A~~La~~G~~V~vlE~~ 18 (381)
T TIGR03197 1 TAYSLARRGWQVTLYEQD 18 (381)
T ss_pred ChHHHHhCCCeeEEEeCC
Confidence 578999999999888774
No 464
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=60.19 E-value=28 Score=19.39 Aligned_cols=56 Identities=7% Similarity=-0.094 Sum_probs=26.0
Q ss_pred HHHHHHc--CCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 2 ALEFARQ--GCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 2 a~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
+++|.++ |.+|+++..+..-.+...+.+. . ...+.+++.|. +..+..+++.+.-+.
T Consensus 41 i~~l~~~~p~~~illT~~T~tg~~~~~~~~~-~-~v~~~~~P~D~--~~~~~rfl~~~~P~~ 98 (186)
T PF04413_consen 41 IKRLRKQRPDLRILLTTTTPTGREMARKLLP-D-RVDVQYLPLDF--PWAVRRFLDHWRPDL 98 (186)
T ss_dssp HHHHTT---TS-EEEEES-CCHHHHHHGG-G-G-G-SEEE---SS--HHHHHHHHHHH--SE
T ss_pred HHHHHHhCCCCeEEEEecCCchHHHHHHhCC-C-CeEEEEeCccC--HHHHHHHHHHhCCCE
Confidence 4555555 7778776554332222222222 1 24566677777 778888887765443
No 465
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=60.18 E-value=9.8 Score=21.83 Aligned_cols=20 Identities=10% Similarity=0.219 Sum_probs=15.8
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
+++.|++.|++|++++|+.+
T Consensus 14 l~~~L~~~g~~V~~~~r~~~ 33 (292)
T TIGR01777 14 LTQRLTKDGHEVTILTRSPP 33 (292)
T ss_pred HHHHHHHcCCEEEEEeCCCC
Confidence 36788999999988877554
No 466
>KOG2305|consensus
Probab=60.15 E-value=19 Score=21.54 Aligned_cols=25 Identities=24% Similarity=0.336 Sum_probs=18.5
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETV 26 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~ 26 (69)
|--|++.|+.|-++|..++.++...
T Consensus 19 AmlFAs~GyqVqlYDI~e~Ql~~AL 43 (313)
T KOG2305|consen 19 AMLFASSGYQVQLYDILEKQLQTAL 43 (313)
T ss_pred HHHHhccCceEEEeeccHHHHHHHH
Confidence 3458999999999998766544433
No 467
>PF13606 Ank_3: Ankyrin repeat
Probab=60.08 E-value=4.1 Score=15.62 Aligned_cols=11 Identities=18% Similarity=0.265 Sum_probs=6.7
Q ss_pred HHHHHHcCCeE
Q psy12399 2 ALEFARQGCKV 12 (69)
Q Consensus 2 a~~la~~G~~V 12 (69)
++.|.+.|++|
T Consensus 18 v~~Ll~~gadv 28 (30)
T PF13606_consen 18 VKYLLEHGADV 28 (30)
T ss_pred HHHHHHcCCCC
Confidence 45666666654
No 468
>TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB. This family consists of RNA methyltransferases designated RumB, formerly YbjF. Members act on 23S rRNA U747 and the equivalent position in other proteobacterial species. This family is homologous to the other 23S rRNA methyltransferase RumA and to the tRNA methyltransferase TrmA.
Probab=59.87 E-value=29 Score=21.52 Aligned_cols=43 Identities=14% Similarity=-0.007 Sum_probs=29.4
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCC-ceeEEEccCC
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPG-AAKGYYCDVG 45 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~ 45 (69)
+..++..|.+|+.++.+....+....-.+.. +. ++.++.+|+.
T Consensus 248 ~l~la~~~~~v~~vE~~~~av~~a~~N~~~~-~~~~~~~~~~d~~ 291 (374)
T TIGR02085 248 GLHCAGPDTQLTGIEIESEAIACAQQSAQML-GLDNLSFAALDSA 291 (374)
T ss_pred HHHHhhcCCeEEEEECCHHHHHHHHHHHHHc-CCCcEEEEECCHH
Confidence 4567778888988988877766666555544 33 5667777763
No 469
>PF08362 TetR_C_3: YcdC-like protein, C-terminal region; InterPro: IPR013573 This entry represents the C-terminal domain found in the hypothetical transcriptional regulators RutR and YcdC (P75899 from SWISSPROT) from Escherichia coli. Both of these proteins are member of the TetR (tetracycline resistance) transcriptional regulator family of proteins. RutR negatively controls the transcription of the rut operon involved in pyrimidine utilization. The C-terminal domains of RutR, YsiA and TetR share a multi-helical, interlocking structure. These proteins also contain helix-turn-helix (HTH) DNA-binding domains.; GO: 0045892 negative regulation of transcription, DNA-dependent; PDB: 3LOC_B.
Probab=59.74 E-value=15 Score=19.82 Aligned_cols=26 Identities=19% Similarity=0.208 Sum_probs=20.0
Q ss_pred cCCCHHHHHHHHHHHHHHhhcccCCC
Q psy12399 43 DVGNVDSVDLRIGLDFRKILSYCTPR 68 (69)
Q Consensus 43 Dv~~~~~~~~~v~~~~~~~~~~~~~~ 68 (69)
+..++++.+.+.+.+..-++.+||+|
T Consensus 118 ~~~~~~d~e~a~~~v~~liL~g~g~~ 143 (143)
T PF08362_consen 118 SELSEEDFEQAAEFVTALILRGCGPR 143 (143)
T ss_dssp -TTSHHHHHHHHHHHHHHHHHHHS--
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 45678888888888888899999986
No 470
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=59.61 E-value=40 Score=20.95 Aligned_cols=22 Identities=14% Similarity=-0.062 Sum_probs=19.3
Q ss_pred CceeEEEccCCCHHHHHHHHHH
Q psy12399 35 GAAKGYYCDVGNVDSVDLRIGL 56 (69)
Q Consensus 35 ~~~~~~~~Dv~~~~~~~~~v~~ 56 (69)
.+..++++|+.|.+.+.+++++
T Consensus 51 ~~~~fv~~DI~D~~~v~~~~~~ 72 (340)
T COG1088 51 PRYRFVQGDICDRELVDRLFKE 72 (340)
T ss_pred CCceEEeccccCHHHHHHHHHh
Confidence 5788999999999999998774
No 471
>KOG0023|consensus
Probab=59.04 E-value=42 Score=21.04 Aligned_cols=45 Identities=16% Similarity=0.241 Sum_probs=25.9
Q ss_pred HHH-HcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCC-CHHHHHHHHH
Q psy12399 4 EFA-RQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVG-NVDSVDLRIG 55 (69)
Q Consensus 4 ~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~v~ 55 (69)
.|+ +.|++|+..+++..+-++....+ |.... .|.+ +++.++++.+
T Consensus 199 q~AKAMG~rV~vis~~~~kkeea~~~L----GAd~f---v~~~~d~d~~~~~~~ 245 (360)
T KOG0023|consen 199 QYAKAMGMRVTVISTSSKKKEEAIKSL----GADVF---VDSTEDPDIMKAIMK 245 (360)
T ss_pred HHHHHhCcEEEEEeCCchhHHHHHHhc----Cccee---EEecCCHHHHHHHHH
Confidence 444 47999998887765545544444 54442 2444 5666655443
No 472
>PTZ00338 dimethyladenosine transferase-like protein; Provisional
Probab=59.04 E-value=34 Score=20.61 Aligned_cols=44 Identities=16% Similarity=0.094 Sum_probs=29.3
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCC--CceeEEEccCCC
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAP--GAAKGYYCDVGN 46 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 46 (69)
...+++.+.+|+.++.++.-.+.+.+.+... + .++.++..|+..
T Consensus 51 T~~Ll~~~~~V~avEiD~~li~~l~~~~~~~-~~~~~v~ii~~Dal~ 96 (294)
T PTZ00338 51 TEKLLQLAKKVIAIEIDPRMVAELKKRFQNS-PLASKLEVIEGDALK 96 (294)
T ss_pred HHHHHHhCCcEEEEECCHHHHHHHHHHHHhc-CCCCcEEEEECCHhh
Confidence 4567788888988888876666655555433 2 356677777643
No 473
>PRK10537 voltage-gated potassium channel; Provisional
Probab=58.98 E-value=25 Score=22.13 Aligned_cols=42 Identities=14% Similarity=0.010 Sum_probs=20.9
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDL 52 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~ 52 (69)
++.|.++|.++++.+.+.. +... .....++.+|.++++..++
T Consensus 256 ~~~L~~~g~~vvVId~d~~------~~~~---~~g~~vI~GD~td~e~L~~ 297 (393)
T PRK10537 256 YLGLRQRGQAVTVIVPLGL------EHRL---PDDADLIPGDSSDSAVLKK 297 (393)
T ss_pred HHHHHHCCCCEEEEECchh------hhhc---cCCCcEEEeCCCCHHHHHh
Confidence 4556677777766554311 1111 1123355667766655543
No 474
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=58.88 E-value=24 Score=21.20 Aligned_cols=43 Identities=9% Similarity=-0.006 Sum_probs=32.2
Q ss_pred cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHHHHh
Q psy12399 19 KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRKI 61 (69)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 61 (69)
...++...+.+++..+.++.++..+-++.++++.....+.+++
T Consensus 48 ~~~Leq~l~~L~~kt~~QiaVv~vpSt~g~~IE~ya~rlfd~W 90 (271)
T COG1512 48 RGALEQQLADLEQKTGAQIAVVTVPSTGGETIEQYATRLFDKW 90 (271)
T ss_pred HHHHHHHHHHHHhccCCeEEEEEecCCCCCCHHHHHHHHHHhc
Confidence 3445666666665536688888889888999999888888775
No 475
>PF14552 Tautomerase_2: Tautomerase enzyme; PDB: 2AAG_C 2AAL_A 2AAJ_A 1MWW_C.
Probab=58.85 E-value=11 Score=18.24 Aligned_cols=34 Identities=6% Similarity=-0.138 Sum_probs=19.6
Q ss_pred ceeEEEccC---CCHHHHHHHHHHHHHHhhcccCCCC
Q psy12399 36 AAKGYYCDV---GNVDSVDLRIGLDFRKILSYCTPRP 69 (69)
Q Consensus 36 ~~~~~~~Dv---~~~~~~~~~v~~~~~~~~~~~~~~~ 69 (69)
+...+.... .+.++-+++++.+.+.+-..||.+|
T Consensus 28 ~~v~I~It~~~gRs~e~K~~ly~~l~~~L~~~~gi~p 64 (82)
T PF14552_consen 28 DFVIIQITSGAGRSTEQKKALYRALAERLAEKLGIRP 64 (82)
T ss_dssp T-EEEEEEECS---HHHHHHHHHHHHHHHHHHH---G
T ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHcCCCH
Confidence 444444433 4677778888888888777788876
No 476
>TIGR03438 probable methyltransferase. This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases
Probab=58.28 E-value=38 Score=20.26 Aligned_cols=45 Identities=11% Similarity=0.059 Sum_probs=25.9
Q ss_pred HHHHHHc---CCeEEEeecCcchHHHHHHHHHhhC-CCceeEEEccCCC
Q psy12399 2 ALEFARQ---GCKVACAEIQKDLNEETVQMVNQVA-PGAAKGYYCDVGN 46 (69)
Q Consensus 2 a~~la~~---G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~ 46 (69)
++.|++. +.+++.+|.+.+-++...+.+...+ +.++..+.+|..+
T Consensus 78 t~~Ll~~l~~~~~~~~iDiS~~mL~~a~~~l~~~~p~~~v~~i~gD~~~ 126 (301)
T TIGR03438 78 TRLLLDALRQPARYVPIDISADALKESAAALAADYPQLEVHGICADFTQ 126 (301)
T ss_pred HHHHHHhhccCCeEEEEECCHHHHHHHHHHHHhhCCCceEEEEEEcccc
Confidence 3455555 5778888888776666555554321 2244455556544
No 477
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=58.19 E-value=11 Score=21.69 Aligned_cols=20 Identities=20% Similarity=0.237 Sum_probs=15.8
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
+|..|++.|.+|.++|.+..
T Consensus 21 LA~~La~~G~kVlliD~Dpq 40 (270)
T cd02040 21 LSAALAEMGKKVMIVGCDPK 40 (270)
T ss_pred HHHHHHhCCCeEEEEEcCCC
Confidence 36788999999998876644
No 478
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=58.17 E-value=52 Score=21.75 Aligned_cols=45 Identities=9% Similarity=0.029 Sum_probs=27.0
Q ss_pred HHHHHHcCCeEEEeec--CcchHHHHHHHHHhhCCCceeEEEccCCCH
Q psy12399 2 ALEFARQGCKVACAEI--QKDLNEETVQMVNQVAPGAAKGYYCDVGNV 47 (69)
Q Consensus 2 a~~la~~G~~V~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 47 (69)
++..+++|.+|++=.. +...-..+.+..+.. +..+..+.++...+
T Consensus 413 a~~~L~~G~sVVIDaTn~~~~~R~~~i~lAk~~-gv~v~~i~~~~p~e 459 (526)
T TIGR01663 413 CERALDQGKRCAIDNTNPDAASRAKFLQCARAA-GIPCRCFLFNAPLA 459 (526)
T ss_pred HHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHc-CCeEEEEEeCCCHH
Confidence 4567789998877322 222334455555555 76777777776543
No 479
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=58.12 E-value=44 Score=20.91 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=29.9
Q ss_pred HHHHHcC--CeEEEeecCc---chHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 3 LEFARQG--CKVACAEIQK---DLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 3 ~~la~~G--~~V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
..|.++| .+++++|... ...-+..+.+++. -.....+..++..+++...+++
T Consensus 113 ~~L~~a~~~~d~iviD~AhGhs~~~i~~ik~ir~~-~p~~~viaGNV~T~e~a~~Li~ 169 (343)
T TIGR01305 113 TSILEAVPQLKFICLDVANGYSEHFVEFVKLVREA-FPEHTIMAGNVVTGEMVEELIL 169 (343)
T ss_pred HHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHhh-CCCCeEEEecccCHHHHHHHHH
Confidence 4566664 6666655432 2233344555554 2345566777888887777665
No 480
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=57.93 E-value=36 Score=19.88 Aligned_cols=53 Identities=8% Similarity=0.065 Sum_probs=31.8
Q ss_pred HHHHHHcCCeEEEeecC-cchHHHHHHHHHhhCCC--ceeEEEccC-CCHHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQ-KDLNEETVQMVNQVAPG--AAKGYYCDV-GNVDSVDLRIGL 56 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~Dv-~~~~~~~~~v~~ 56 (69)
.+.|++.|++.+....+ ..........+++. |. ++ .+..+- |..+.+..++..
T Consensus 84 i~~~~~aGad~It~H~Ea~~~~~~~l~~Ik~~-g~~~ka-GlalnP~Tp~~~i~~~l~~ 140 (228)
T PRK08091 84 AKACVAAGADIVTLQVEQTHDLALTIEWLAKQ-KTTVLI-GLCLCPETPISLLEPYLDQ 140 (228)
T ss_pred HHHHHHhCCCEEEEcccCcccHHHHHHHHHHC-CCCceE-EEEECCCCCHHHHHHHHhh
Confidence 35788999987665443 34466777777776 65 44 333333 555666655543
No 481
>KOG1430|consensus
Probab=57.89 E-value=17 Score=22.77 Aligned_cols=54 Identities=6% Similarity=-0.002 Sum_probs=33.5
Q ss_pred HHHHHHcC--CeEEEeecCcchHHHHHHHHH-hhCCCceeEEEccCCCHHHHHHHHHHH
Q psy12399 2 ALEFARQG--CKVACAEIQKDLNEETVQMVN-QVAPGAAKGYYCDVGNVDSVDLRIGLD 57 (69)
Q Consensus 2 a~~la~~G--~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 57 (69)
++.|.++| ..|.+.|....... +..+.. .. ...+.+..+|+.+..++...+..+
T Consensus 21 v~~L~~~~~~~~irv~D~~~~~~~-~~~e~~~~~-~~~v~~~~~D~~~~~~i~~a~~~~ 77 (361)
T KOG1430|consen 21 VQALLENELKLEIRVVDKTPTQSN-LPAELTGFR-SGRVTVILGDLLDANSISNAFQGA 77 (361)
T ss_pred HHHHHhcccccEEEEeccCccccc-cchhhhccc-CCceeEEecchhhhhhhhhhccCc
Confidence 56778888 66777776543111 111111 12 456788889999998888877643
No 482
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=57.85 E-value=36 Score=19.88 Aligned_cols=53 Identities=11% Similarity=0.172 Sum_probs=32.4
Q ss_pred HHHHHHcCCeEEEeec-CcchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEI-QKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
...|++.|++.+.... ..+....+.+.+++. |.+.-..-.--|-.+.++.+++
T Consensus 77 i~~fa~agad~It~H~E~~~~~~r~i~~Ik~~-G~kaGv~lnP~Tp~~~i~~~l~ 130 (220)
T COG0036 77 IEAFAKAGADIITFHAEATEHIHRTIQLIKEL-GVKAGLVLNPATPLEALEPVLD 130 (220)
T ss_pred HHHHHHhCCCEEEEEeccCcCHHHHHHHHHHc-CCeEEEEECCCCCHHHHHHHHh
Confidence 4678999988665433 345678888888887 6655333333344445554443
No 483
>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases. Members of this subfamily of Ras-like small GTPases include Cdc42 and Rac, as well as Rho isoforms.
Probab=57.68 E-value=27 Score=18.37 Aligned_cols=26 Identities=8% Similarity=-0.188 Sum_probs=17.8
Q ss_pred CCceeEEEccCCCHHHHHHHHHHHHH
Q psy12399 34 PGAAKGYYCDVGNVDSVDLRIGLDFR 59 (69)
Q Consensus 34 ~~~~~~~~~Dv~~~~~~~~~v~~~~~ 59 (69)
+..+..+..|++++++.+.+......
T Consensus 69 ~~d~~ilv~d~~~~~s~~~~~~~~~~ 94 (174)
T smart00174 69 DTDVFLICFSVDSPASFENVKEKWYP 94 (174)
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHH
Confidence 45677778899998887766543333
No 484
>COG0362 Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=57.64 E-value=16 Score=23.48 Aligned_cols=28 Identities=25% Similarity=0.273 Sum_probs=21.4
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMV 29 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~ 29 (69)
+..+++.|++|.+..|+.++.+++.++-
T Consensus 19 aLNi~~~G~~VavyNRt~~ktd~f~~~~ 46 (473)
T COG0362 19 ALNIADHGYTVAVYNRTTEKTDEFLAER 46 (473)
T ss_pred HHHHHhcCceEEEEeCCHHHHHHHHHhC
Confidence 5677899999999988877766655443
No 485
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=57.48 E-value=35 Score=19.64 Aligned_cols=53 Identities=11% Similarity=0.206 Sum_probs=30.1
Q ss_pred HHHHHHcCCeEEEeecC-cchHHHHHHHHHhhCCCceeEEEccCCCHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQ-KDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIG 55 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~ 55 (69)
...|++.|++.+....+ .....++...+++. |.++-..-.--|..+.+..+++
T Consensus 74 i~~~~~~gad~i~~H~Ea~~~~~~~l~~ik~~-g~k~GlalnP~Tp~~~i~~~l~ 127 (220)
T PRK08883 74 IPDFAKAGASMITFHVEASEHVDRTLQLIKEH-GCQAGVVLNPATPLHHLEYIMD 127 (220)
T ss_pred HHHHHHhCCCEEEEcccCcccHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHH
Confidence 35678889887654443 34466777777776 6555322222245555555443
No 486
>TIGR02129 hisA_euk phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type. This enzyme acts in the biosynthesis of histidine and has been characterized in S. cerevisiae and Arabidopsis where it complements the E. coli HisA gene. In eukaryotes the gene is known as HIS6. In bacteria, this gene is found in Fibrobacter succinogenes, presumably due to lateral gene transfer from plants in the rumen gut.
Probab=57.47 E-value=39 Score=20.12 Aligned_cols=17 Identities=18% Similarity=0.214 Sum_probs=10.8
Q ss_pred HHHHHHcCCe-EEEeecC
Q psy12399 2 ALEFARQGCK-VACAEIQ 18 (69)
Q Consensus 2 a~~la~~G~~-V~~~~~~ 18 (69)
|+.|.++|++ +.++|..
T Consensus 44 A~~~~~~Ga~~lHvVDLg 61 (253)
T TIGR02129 44 AKLYKDDGVKGCHVIMLG 61 (253)
T ss_pred HHHHHHcCCCEEEEEECC
Confidence 6777788886 3445543
No 487
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=57.41 E-value=9.7 Score=20.53 Aligned_cols=20 Identities=30% Similarity=0.464 Sum_probs=14.7
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
+|..|++.|.+|.+.+.+..
T Consensus 19 la~~la~~g~~VlliD~D~~ 38 (195)
T PF01656_consen 19 LAQALARKGKKVLLIDLDPQ 38 (195)
T ss_dssp HHHHHHHTTS-EEEEEESTT
T ss_pred HHhccccccccccccccCcc
Confidence 36788899999999877543
No 488
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=57.22 E-value=19 Score=24.34 Aligned_cols=25 Identities=20% Similarity=0.171 Sum_probs=18.5
Q ss_pred CHHHHH-HcCCeEEEeecCcchHHHH
Q psy12399 1 MALEFA-RQGCKVACAEIQKDLNEET 25 (69)
Q Consensus 1 ia~~la-~~G~~V~~~~~~~~~~~~~ 25 (69)
||..|+ ..|+.|.+++.+.+.++..
T Consensus 319 iA~~~a~~~G~~V~l~d~~~~~l~~~ 344 (699)
T TIGR02440 319 IASVTATKAGIPVRIKDINPQGINNA 344 (699)
T ss_pred HHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 466777 4899999999887655443
No 489
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=57.20 E-value=33 Score=21.75 Aligned_cols=31 Identities=13% Similarity=0.215 Sum_probs=19.8
Q ss_pred HHHHHHcCCeEEEeecCcc-hHHHHHHHHHhh
Q psy12399 2 ALEFARQGCKVACAEIQKD-LNEETVQMVNQV 32 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~-~~~~~~~~~~~~ 32 (69)
|+.|.+.|++|.+.+.+.. ......+.+++.
T Consensus 32 A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~ 63 (480)
T PRK01438 32 ADALLELGARVTVVDDGDDERHRALAAILEAL 63 (480)
T ss_pred HHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc
Confidence 6778899999988875433 233334455544
No 490
>PRK13586 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=56.95 E-value=37 Score=19.71 Aligned_cols=42 Identities=7% Similarity=-0.125 Sum_probs=20.6
Q ss_pred HHHHHHcCCe-EEEeecCcchHHHHHHHHHhhCCCceeEEEccC
Q psy12399 2 ALEFARQGCK-VACAEIQKDLNEETVQMVNQVAPGAAKGYYCDV 44 (69)
Q Consensus 2 a~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 44 (69)
++.+.+.|+. |++....-.. .++..++.+.|+.+...+..|+
T Consensus 88 ~~~~l~~Ga~kvvigt~a~~~-p~~~~~~~~~~g~~~ivvslD~ 130 (232)
T PRK13586 88 AKRLLSLDVNALVFSTIVFTN-FNLFHDIVREIGSNRVLVSIDY 130 (232)
T ss_pred HHHHHHCCCCEEEECchhhCC-HHHHHHHHHHhCCCCEEEEEEc
Confidence 4667888886 4442211111 2233333333355555666776
No 491
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=56.90 E-value=11 Score=21.85 Aligned_cols=19 Identities=21% Similarity=0.330 Sum_probs=14.9
Q ss_pred CHHHHHHcCCeEEEeecCc
Q psy12399 1 MALEFARQGCKVACAEIQK 19 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~ 19 (69)
+|..|++.|.+|.++|.+.
T Consensus 20 LA~~la~~G~rvlliD~Dp 38 (267)
T cd02032 20 LSVALAKRGKKVLQIGCDP 38 (267)
T ss_pred HHHHHHHCCCcEEEEecCC
Confidence 3678999999998876653
No 492
>PHA02518 ParA-like protein; Provisional
Probab=56.90 E-value=12 Score=20.49 Aligned_cols=19 Identities=21% Similarity=0.239 Sum_probs=15.2
Q ss_pred HHHHHHcCCeEEEeecCcc
Q psy12399 2 ALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~ 20 (69)
|..|++.|.+|.++|.+..
T Consensus 22 a~~la~~g~~vlliD~D~q 40 (211)
T PHA02518 22 ASWLHADGHKVLLVDLDPQ 40 (211)
T ss_pred HHHHHhCCCeEEEEeCCCC
Confidence 5678899999998877654
No 493
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=56.88 E-value=24 Score=20.64 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=20.3
Q ss_pred HHHHHcCCeEEE-eecCcchHHHHHHHHHhh
Q psy12399 3 LEFARQGCKVAC-AEIQKDLNEETVQMVNQV 32 (69)
Q Consensus 3 ~~la~~G~~V~~-~~~~~~~~~~~~~~~~~~ 32 (69)
+.+.+.|.+|++ ++|++...+.+.+.+...
T Consensus 130 ~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~ 160 (229)
T TIGR01675 130 QKIIELGIKIFLLSGRWEELRNATLDNLINA 160 (229)
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHHHHHc
Confidence 456788999876 677665545566666655
No 494
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=56.84 E-value=11 Score=21.99 Aligned_cols=20 Identities=25% Similarity=0.283 Sum_probs=15.5
Q ss_pred CHHHHHHcCCeEEEeecCcc
Q psy12399 1 MALEFARQGCKVACAEIQKD 20 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~~ 20 (69)
+|..|++.|.+|.++|.+..
T Consensus 21 LA~~La~~G~rVLliD~Dpq 40 (279)
T PRK13230 21 IAAALAESGKKVLVVGCDPK 40 (279)
T ss_pred HHHHHHhCCCEEEEEeeCCc
Confidence 36789999999988776543
No 495
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=56.81 E-value=25 Score=17.65 Aligned_cols=19 Identities=21% Similarity=0.223 Sum_probs=12.5
Q ss_pred HHHcCCeEEEeecCcchHH
Q psy12399 5 FARQGCKVACAEIQKDLNE 23 (69)
Q Consensus 5 la~~G~~V~~~~~~~~~~~ 23 (69)
....|++|+++++++.+.+
T Consensus 10 ak~~G~~vi~~~~~~~k~~ 28 (130)
T PF00107_consen 10 AKAMGAKVIATDRSEEKLE 28 (130)
T ss_dssp HHHTTSEEEEEESSHHHHH
T ss_pred HHHcCCEEEEEECCHHHHH
Confidence 3457888888887655433
No 496
>KOG1202|consensus
Probab=56.72 E-value=65 Score=24.47 Aligned_cols=56 Identities=7% Similarity=-0.067 Sum_probs=39.6
Q ss_pred HHHHHHcCCe-EEEeecCcchH---HHHHHHHHhhCCCceeEEEccCCCHHHHHHHHHHHH
Q psy12399 2 ALEFARQGCK-VACAEIQKDLN---EETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDF 58 (69)
Q Consensus 2 a~~la~~G~~-V~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 58 (69)
+.+|..+|++ ++++.|+--+. ......++.. |.++..-..|++.....+.++++..
T Consensus 1785 aqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~-GVqV~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1785 AQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR-GVQVQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred HHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc-CeEEEEecccchhhhhHHHHHHHhh
Confidence 6789999998 56676654331 2233445555 8888877889999999888887654
No 497
>PRK07580 Mg-protoporphyrin IX methyl transferase; Validated
Probab=56.60 E-value=34 Score=19.12 Aligned_cols=29 Identities=28% Similarity=0.486 Sum_probs=19.4
Q ss_pred HHHHHHcCCeEEEeecCcchHHHHHHHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEETVQMVN 30 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~~~~~~~ 30 (69)
+..|++.|..|..++.++...+.......
T Consensus 78 ~~~l~~~~~~v~~~D~s~~~i~~a~~~~~ 106 (230)
T PRK07580 78 SIPLARRGAKVVASDISPQMVEEARERAP 106 (230)
T ss_pred HHHHHHcCCEEEEEECCHHHHHHHHHHHH
Confidence 45677888888888887665555444443
No 498
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=56.32 E-value=11 Score=21.75 Aligned_cols=19 Identities=26% Similarity=0.310 Sum_probs=15.1
Q ss_pred CHHHHHHcCCeEEEeecCc
Q psy12399 1 MALEFARQGCKVACAEIQK 19 (69)
Q Consensus 1 ia~~la~~G~~V~~~~~~~ 19 (69)
+|..|++.|.+|.++|.+.
T Consensus 22 LA~~la~~G~kVLliD~Dp 40 (270)
T PRK13185 22 LSAAFAKLGKKVLQIGCDP 40 (270)
T ss_pred HHHHHHHCCCeEEEEeccC
Confidence 4678999999998877653
No 499
>PRK05370 argininosuccinate synthase; Validated
Probab=56.18 E-value=53 Score=21.32 Aligned_cols=11 Identities=18% Similarity=0.501 Sum_probs=4.8
Q ss_pred ceeEEEccCCC
Q psy12399 36 AAKGYYCDVGN 46 (69)
Q Consensus 36 ~~~~~~~Dv~~ 46 (69)
.+..+.+|++.
T Consensus 37 eVia~~aDvGQ 47 (447)
T PRK05370 37 VPYAYTANLGQ 47 (447)
T ss_pred eEEEEEEECCC
Confidence 34444444443
No 500
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=56.04 E-value=16 Score=21.88 Aligned_cols=23 Identities=13% Similarity=0.046 Sum_probs=17.1
Q ss_pred HHHHHHcCCeEEEeecCcchHHH
Q psy12399 2 ALEFARQGCKVACAEIQKDLNEE 24 (69)
Q Consensus 2 a~~la~~G~~V~~~~~~~~~~~~ 24 (69)
+..|+++|.+|.+++|+.+..+.
T Consensus 16 a~~L~~~g~~V~l~~r~~~~~~~ 38 (326)
T PRK14620 16 AIALSSKKISVNLWGRNHTTFES 38 (326)
T ss_pred HHHHHHCCCeEEEEecCHHHHHH
Confidence 56788999999998886544433
Done!