Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>psy12399
MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPGAAKGYYCDVGNVDSVDLRIGLDFRK
ILSYCTPRP

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy12399
        (69 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

WB|WBGene00000992 - symbol:dhs-29 species:6239 "Caenorhab...    93  7.3e-05   2


>WB|WBGene00000992 [details] [associations]
            symbol:dhs-29 species:6239 "Caenorhabditis elegans"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
            "oxidoreductase activity" evidence=IEA] [GO:0003854
            "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
            evidence=IEA] [GO:0006694 "steroid biosynthetic process"
            evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
            CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
            [GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
            "biosynthetic process" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR002198 Pfam:PF00106
            InterPro:IPR016040 InterPro:IPR002347 GO:GO:0000166
            Gene3D:3.40.50.720 GO:GO:0016491 eggNOG:COG1028 PRINTS:PR00081
            GO:GO:0055114 GeneTree:ENSGT00540000069900 HSSP:P97852
            EMBL:FO080935 PIR:T16188 RefSeq:NP_509294.1
            ProteinModelPortal:Q19843 SMR:Q19843 IntAct:Q19843 STRING:Q19843
            PaxDb:Q19843 EnsemblMetazoa:F27D9.6 GeneID:181027
            KEGG:cel:CELE_F27D9.6 UCSC:F27D9.6 CTD:181027 WormBase:F27D9.6
            HOGENOM:HOG000020967 InParanoid:Q19843 OMA:RILFIDI NextBio:912060
            Uniprot:Q19843
        Length = 427

 Score = 93 (37.8 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
 Identities = 21/51 (41%), Positives = 34/51 (66%)

Query:     1 MALEFARQGCKVACAEIQKDLNEETVQMVNQVAPG-AAKGYYCDVGNVDSV 50
             MAL+FA++  KVA  ++ K+   ETV+ +   A G  AK +YCD+ +VD++
Sbjct:    57 MALDFAKRKAKVAIIDVNKEGGLETVKTI--AAEGNMAKFWYCDISDVDNM 105

 Score = 30 (15.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query:    62 LSYCTPR 68
             LSYCT +
Sbjct:   188 LSYCTSK 194


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       69        69   0.00091  102 3  11 22  0.44    28
                                                     29  0.39    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  504 (54 KB)
  Total size of DFA:  91 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:04
  No. of threads or processors used:  24
  Search cpu time:  8.25u 0.06s 8.31t   Elapsed:  00:00:32
  Total cpu time:  8.25u 0.06s 8.31t   Elapsed:  00:00:36
  Start:  Thu Aug 15 14:16:33 2013   End:  Thu Aug 15 14:17:09 2013

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