BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy124
(60 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P34834|ATP6_ANOGA ATP synthase subunit a OS=Anopheles gambiae GN=mt:ATPase6 PE=3 SV=1
Length = 226
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP +L+P +V IE N+IRP LAVRLTAN++A
Sbjct: 130 LVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLTANMIA 168
>sp|P33507|ATP6_ANOQU ATP synthase subunit a OS=Anopheles quadrimaculatus GN=ATP6 PE=3
SV=1
Length = 226
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP +L+P +V IE N+IRP LAVRLTAN++A
Sbjct: 130 LVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLTANMIA 168
>sp|P50681|ATP6_COTJA ATP synthase subunit a OS=Coturnix coturnix japonica GN=MT-ATP6
PE=3 SV=2
Length = 227
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIPI+++IE T +IRP+AL VRLTANL A
Sbjct: 129 LLPEGTPTPLIPILIMIETTSLLIRPLALGVRLTANLTA 167
>sp|Q1HRS5|ATP6_AEDAE ATP synthase subunit a OS=Aedes aegypti GN=mt:ATPase6 PE=2 SV=1
Length = 226
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP +L+P +V IE N+IRP LAVRLTAN++A
Sbjct: 130 LVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLTANMIA 168
>sp|P41291|ATP6_BALMU ATP synthase subunit a OS=Balaenoptera musculus GN=MT-ATP6 PE=3
SV=1
Length = 226
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 LLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITA 166
>sp|P00850|ATP6_DROME ATP synthase subunit a OS=Drosophila melanogaster GN=mt:ATPase6
PE=3 SV=3
Length = 224
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP IL+P +V IE NIIRP LAVRLTAN++A
Sbjct: 129 LVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIA 167
>sp|Q96064|ATP6_RHIUN ATP synthase subunit a OS=Rhinoceros unicornis GN=MT-ATP6 PE=3 SV=1
Length = 226
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
+P GTP LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 FLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITA 166
>sp|P00851|ATP6_DROYA ATP synthase subunit a OS=Drosophila yakuba GN=mt:ATPase6 PE=3 SV=1
Length = 224
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP IL+P +V IE NIIRP LAVRLTAN++A
Sbjct: 129 LVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIA 167
>sp|P50269|ATP6_DROSI ATP synthase subunit a OS=Drosophila simulans GN=mt:ATPase6 PE=3
SV=1
Length = 224
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP IL+P +V IE NIIRP LAVRLTAN++A
Sbjct: 129 LVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIA 167
>sp|Q35538|ATP6_PETMA ATP synthase subunit a OS=Petromyzon marinus GN=MT-ATP6 PE=3 SV=1
Length = 237
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIP+++IIE IRPIAL VRLTANL A
Sbjct: 129 LLPEGTPAALIPMLIIIETISLFIRPIALGVRLTANLTA 167
>sp|Q1MKT2|ATP6_RHIL3 ATP synthase subunit a OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=atpB PE=3 SV=1
Length = 250
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P IL+P++V IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGILLPLVVTIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|B3PRF6|ATP6_RHIE6 ATP synthase subunit a OS=Rhizobium etli (strain CIAT 652) GN=atpB
PE=3 SV=1
Length = 250
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P IL+P++V IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGILLPLVVAIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|Q7IV45|ATP6_DROSE ATP synthase subunit a OS=Drosophila sechellia GN=mt:ATPase6 PE=3
SV=1
Length = 224
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP +L+P +V IE NIIRP LAVRLTAN++A
Sbjct: 129 LVPQGTPAVLMPFMVCIETISNIIRPGTLAVRLTANMIA 167
>sp|Q35915|ATP6_PIG ATP synthase subunit a OS=Sus scrofa GN=MT-ATP6 PE=2 SV=2
Length = 226
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
+P GTP +LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 FLPQGTPALLIPMLVIIETISLFIQPVALAVRLTANITA 166
>sp|Q7IV55|ATP6_DROMA ATP synthase subunit a OS=Drosophila mauritiana GN=mt:ATPase6 PE=3
SV=2
Length = 224
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP +L+P +V IE NIIRP LAVRLTAN++A
Sbjct: 129 LVPQGTPAVLMPFMVCIETISNIIRPGTLAVRLTANMIA 167
>sp|B5ZS16|ATP6_RHILW ATP synthase subunit a OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=atpB PE=3 SV=1
Length = 250
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P IL+P++V IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGILLPLVVSIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|Q2KBW1|ATP6_RHIEC ATP synthase subunit a OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=atpB PE=3 SV=1
Length = 250
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P IL+P++V IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGILLPLVVAIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|Q8G2E1|ATP6_BRUSU ATP synthase subunit a OS=Brucella suis biovar 1 (strain 1330)
GN=atpB PE=3 SV=1
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P I++P++V+IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|B0CK70|ATP6_BRUSI ATP synthase subunit a OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=atpB PE=3 SV=1
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P I++P++V+IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|A5VNW2|ATP6_BRUO2 ATP synthase subunit a OS=Brucella ovis (strain ATCC 25840 / 63/290
/ NCTC 10512) GN=atpB PE=3 SV=1
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P I++P++V+IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|Q8YFH6|ATP6_BRUME ATP synthase subunit a OS=Brucella melitensis biotype 1 (strain 16M
/ ATCC 23456 / NCTC 10094) GN=atpB PE=3 SV=2
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P I++P++V+IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|C0RH93|ATP6_BRUMB ATP synthase subunit a OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=atpB PE=3 SV=1
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P I++P++V+IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|A9M8F8|ATP6_BRUC2 ATP synthase subunit a OS=Brucella canis (strain ATCC 23365 / NCTC
10854) GN=atpB PE=3 SV=1
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P I++P++V+IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|Q57EY0|ATP6_BRUAB ATP synthase subunit a OS=Brucella abortus biovar 1 (strain 9-941)
GN=atpB PE=3 SV=1
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P I++P++V+IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|Q2YM92|ATP6_BRUA2 ATP synthase subunit a OS=Brucella abortus (strain 2308) GN=atpB
PE=3 SV=1
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P I++P++V+IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|B2S9M8|ATP6_BRUA1 ATP synthase subunit a OS=Brucella abortus (strain S19) GN=atpB
PE=3 SV=1
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P I++P++V+IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGIIVPLVVLIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|O21402|ATP6_STRCA ATP synthase subunit a OS=Struthio camelus GN=MT-ATP6 PE=3 SV=1
Length = 227
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIP +++IE T +IRP+AL VRLTANL A
Sbjct: 129 LLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTA 167
>sp|P14092|ATP6_CHICK ATP synthase subunit a OS=Gallus gallus GN=MT-ATP6 PE=3 SV=1
Length = 227
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIP +++IE T +IRP+AL VRLTANL A
Sbjct: 129 LLPEGTPTPLIPALIMIETTSLLIRPLALGVRLTANLTA 167
>sp|P50654|ATP6_ANAPL ATP synthase subunit a OS=Anas platyrhynchos GN=MT-ATP6 PE=3 SV=1
Length = 227
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIP +++IE T +IRP+AL VRLTANL A
Sbjct: 129 LLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTA 167
>sp|O03359|ATP6_TROMO ATP synthase subunit a (Fragment) OS=Tropidurus montanus GN=MT-ATP6
PE=3 SV=2
Length = 212
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIP+++IIE IRP+AL VRLTANL A
Sbjct: 118 LLPEGTPTPLIPLLIIIETVSLFIRPLALGVRLTANLTA 156
>sp|P14569|ATP6_LOCMI ATP synthase subunit a OS=Locusta migratoria GN=ATP6 PE=3 SV=1
Length = 225
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTPN L+ +V+IE N+IRP LAVRL AN++A
Sbjct: 130 LVPQGTPNALMSFMVLIETISNVIRPGTLAVRLAANMIA 168
>sp|Q37708|ATP6_ARTSF ATP synthase subunit a OS=Artemia franciscana GN=ATP6 PE=3 SV=1
Length = 219
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP L+P +V++EI N+IRPI L+VRL AN++A
Sbjct: 126 LVPLGTPAPLMPFMVLMEIISNMIRPITLSVRLAANMIA 164
>sp|P00849|ATP6_XENLA ATP synthase subunit a OS=Xenopus laevis GN=mt-atp6 PE=3 SV=1
Length = 226
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIP+++IIE IRP+AL VRLTANL A
Sbjct: 128 LLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTANLTA 166
>sp|O03200|ATP6_CERSI ATP synthase subunit a OS=Ceratotherium simum GN=MT-ATP6 PE=3 SV=1
Length = 226
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
+P GTP LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 FLPQGTPVFLIPMLVIIETISLFIQPVALAVRLTANITA 166
>sp|B9JA28|ATP6_AGRRK ATP synthase subunit a OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=atpB PE=3 SV=1
Length = 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+P G P IL+P++VIIEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPQGVPGILLPLVVIIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|O03570|ATP6_TROHI ATP synthase subunit a (Fragment) OS=Tropidurus hispidus GN=MT-ATP6
PE=3 SV=1
Length = 212
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIP+++IIE IRP+AL VRLTANL A
Sbjct: 118 LLPEGTPTPLIPLLIIIETVSLFIRPLALGVRLTANLTA 156
>sp|Q9ZXX9|ATP6_PAPHA ATP synthase subunit a OS=Papio hamadryas GN=MT-ATP6 PE=3 SV=1
Length = 226
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
M+P GTP LIP++V+IE +I+P+ALAVRLTAN+ A
Sbjct: 128 MLPQGTPTPLIPMLVMIETISLLIQPMALAVRLTANITA 166
>sp|P48662|ATP6_HORSE ATP synthase subunit a OS=Equus caballus GN=MT-ATP6 PE=3 SV=1
Length = 226
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
+P GTP LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 FLPQGTPIFLIPMLVIIETISLFIQPVALAVRLTANITA 166
>sp|O78752|ATP6_SHEEP ATP synthase subunit a OS=Ovis aries GN=MT-ATP6 PE=3 SV=1
Length = 226
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
+P GTP LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 FLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITA 166
>sp|Q8LTZ5|ATP6_BOSIN ATP synthase subunit a OS=Bos indicus GN=MT-ATP6 PE=3 SV=1
Length = 226
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
+P GTP LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 FLPQGTPTPLIPMLVIIETISLFIQPVALAVRLTANITA 166
>sp|P24945|ATP6_BALPH ATP synthase subunit a OS=Balaenoptera physalus GN=MT-ATP6 PE=3
SV=1
Length = 226
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIP++VIIE I+P+A AVRLTAN+ A
Sbjct: 128 LLPQGTPTFLIPMLVIIETISLFIQPVAWAVRLTANITA 166
>sp|O79406|ATP6_SCYCA ATP synthase subunit a OS=Scyliorhinus canicula GN=MT-ATP6 PE=3
SV=1
Length = 227
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP L+P+++IIE IRP+AL VRLTANL A
Sbjct: 129 LLPEGTPTPLVPVLIIIETISLFIRPLALGVRLTANLTA 167
>sp|Q7YCA5|ATP6_BOSMU ATP synthase subunit a OS=Bos mutus grunniens GN=MT-ATP6 PE=3 SV=1
Length = 226
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
+P GTP LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 FLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITA 166
>sp|P92480|ATP6_EQUAS ATP synthase subunit a OS=Equus asinus GN=MT-ATP6 PE=3 SV=1
Length = 226
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
+P GTP LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 FLPQGTPIFLIPMLVIIETISLFIQPMALAVRLTANITA 166
>sp|Q9T9Y7|ATP6_GORGO ATP synthase subunit a OS=Gorilla gorilla gorilla GN=MT-ATP6 PE=3
SV=1
Length = 226
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
++P GTP LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 LLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITA 166
>sp|A6WW77|ATP61_OCHA4 ATP synthase subunit a 1 OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=atpB1 PE=3 SV=1
Length = 249
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+PSG P I++P++V IEI + RPI+L+VRL AN+LA + L
Sbjct: 145 VPSGVPGIIVPLVVAIEIISFLSRPISLSVRLFANMLAGHITL 187
>sp|Q9T9W0|ATP6_PANTR ATP synthase subunit a OS=Pan troglodytes GN=MT-ATP6 PE=3 SV=1
Length = 226
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
+P GTP LIP++VIIE +I+P+ALAVRLTAN+ A
Sbjct: 128 FLPQGTPTPLIPMLVIIETISLLIQPMALAVRLTANITA 166
>sp|P00847|ATP6_BOVIN ATP synthase subunit a OS=Bos taurus GN=MT-ATP6 PE=1 SV=1
Length = 226
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MIPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLA 39
+P GTP LIP++VIIE I+P+ALAVRLTAN+ A
Sbjct: 128 FLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITA 166
>sp|Q11KH9|ATP6_MESSB ATP synthase subunit a OS=Mesorhizobium sp. (strain BNC1) GN=atpB
PE=3 SV=1
Length = 249
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWL 44
+P G P +L+P++V+IE+ + RPI+L+VRL AN+LA + L
Sbjct: 145 VPEGVPGVLLPLVVLIEVISFLSRPISLSVRLFANMLAGHITL 187
>sp|Q4FPE9|ATP6_PELUB ATP synthase subunit a OS=Pelagibacter ubique (strain HTCC1062)
GN=atpB PE=3 SV=1
Length = 244
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 2 IPSGTPNILIPIIVIIEITRNIIRPIALAVRLTANLLASLVWLGDLKQRLDQLNLAGG 59
+PSG P +L+P+IV+IEI + RP++L+VRL AN++A + + L + GG
Sbjct: 146 VPSGVPAVLLPLIVVIEIISYLSRPVSLSVRLFANMMAGHTMMKVFGGFVISLGIVGG 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.146 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,464,082
Number of Sequences: 539616
Number of extensions: 525177
Number of successful extensions: 2001
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1706
Number of HSP's gapped (non-prelim): 303
length of query: 60
length of database: 191,569,459
effective HSP length: 33
effective length of query: 27
effective length of database: 173,762,131
effective search space: 4691577537
effective search space used: 4691577537
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)