BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12401
(255 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9U518|ASPG_DIRIM L-asparaginase OS=Dirofilaria immitis PE=1 SV=1
Length = 590
Score = 217 bits (552), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 146/210 (69%), Gaps = 4/210 (1%)
Query: 48 ESRVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEY--LAL 105
E+ VLV+YTGGTIGM DGV P++N IR L++D DY+ +E L
Sbjct: 5 EAHVLVLYTGGTIGMKYI-DGVYQPEANYLLHAIRDLSLLNDDDYVSTYYSDAEIRPYCL 63
Query: 106 PGLKHNK-RVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYT 164
P L+H+K RV+Y ++EYD LLDSS+MT DDWI+I D+ Y+ + GFVILHGTDTL YT
Sbjct: 64 PPLQHSKKRVVYWMIEYDPLLDSSDMTFDDWIHIGKDIQRAYDQYVGFVILHGTDTLAYT 123
Query: 165 AAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNKLMR 224
A ALSFM EN+ K ++ITG+QI + + RSDG +N I +LI+A NY IPEVTVYF+NKL R
Sbjct: 124 ACALSFMLENVRKPIVITGAQIPVCEVRSDGRENLIGALIIAANYDIPEVTVYFNNKLFR 183
Query: 225 GNRTIKTSTYEFDAFISPNCLPLVQVGIEI 254
GNRT+K DAF SPN LP+ + ++I
Sbjct: 184 GNRTVKIDNRSMDAFESPNMLPIAYMDVDI 213
>sp|Q86U10|LPP60_HUMAN 60 kDa lysophospholipase OS=Homo sapiens GN=ASPG PE=2 SV=3
Length = 573
Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 134/207 (64%), Gaps = 2/207 (0%)
Query: 48 ESRVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPG 107
E R+L +YTGGTIGM + GVL P + +R P+ HD ++ R R + L LP
Sbjct: 8 ERRLLAVYTGGTIGMR-SELGVLVPGTG-LAAILRTLPMFHDEEHARARGLSEDTLVLPP 65
Query: 108 LKHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAA 167
N+R+LY VLE L DSS+MT+ +W+ +A + +YE + GFV++HGTDT+ + A+
Sbjct: 66 ASRNQRILYTVLECQPLFDSSDMTIAEWVCLAQTIKRHYEQYHGFVVIHGTDTMAFAASM 125
Query: 168 LSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNKLMRGNR 227
LSFM ENL KTVI+TG+Q+ I SDG +N + +L++AG YVIPEV ++F N+L RGNR
Sbjct: 126 LSFMLENLQKTVILTGAQVPIHALWSDGRENLLGALLMAGQYVIPEVCLFFQNQLFRGNR 185
Query: 228 TIKTSTYEFDAFISPNCLPLVQVGIEI 254
K F AF SPN LPL VG +I
Sbjct: 186 ATKVDARRFAAFCSPNLLPLATVGADI 212
>sp|O88202|LPP60_RAT 60 kDa lysophospholipase OS=Rattus norvegicus GN=Aspg PE=1 SV=1
Length = 564
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 132/207 (63%), Gaps = 2/207 (0%)
Query: 48 ESRVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPG 107
E R+L IYTGGTIGM + GVL P +R ++HD +Y R + L LP
Sbjct: 8 EQRLLAIYTGGTIGMR-SEGGVLVP-GRGLAAVLRTLHMLHDEEYARAHSLPEDTLVLPP 65
Query: 108 LKHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAA 167
++R++YKVLE L DSS+MT+ +W+ IA + +Y + GFV++HGTDT+ + A+
Sbjct: 66 ASSDQRIIYKVLECQPLFDSSDMTITEWVQIAQTIERHYTQYQGFVVIHGTDTMAFAASV 125
Query: 168 LSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNKLMRGNR 227
LSFM ENL K VI+TG+Q+ I + SDG +N + +L++AG YVIPEV ++F N+L RGNR
Sbjct: 126 LSFMLENLQKPVILTGAQVPIHELWSDGRENLLGALLMAGQYVIPEVCLFFQNQLFRGNR 185
Query: 228 TIKTSTYEFDAFISPNCLPLVQVGIEI 254
T K F AF SPN PL VG ++
Sbjct: 186 TTKVDARRFAAFCSPNLPPLATVGADV 212
>sp|A0JNU3|LPP60_MOUSE 60 kDa lysophospholipase OS=Mus musculus GN=Aspg PE=1 SV=1
Length = 564
Score = 191 bits (486), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 129/207 (62%), Gaps = 2/207 (0%)
Query: 48 ESRVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPG 107
E R+L IYTGGTIGM + GVL P ++ + HD +Y + + L LP
Sbjct: 8 ERRLLAIYTGGTIGMR-SEGGVLVP-GRGLAAVLKTLHMFHDEEYAQAHSLPEDTLVLPP 65
Query: 108 LKHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAA 167
++R++Y VLE L DSS+MT+ +W+ IA + +Y + GFV++HGTDT+ + A+
Sbjct: 66 ASPDQRIIYTVLECQPLFDSSDMTITEWVQIAQTIERHYAQYQGFVVIHGTDTMAFAASV 125
Query: 168 LSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNKLMRGNR 227
LSFM ENL K V++TG+Q+ I SDG +N + +L++AG YVIPEV ++F N+L RGNR
Sbjct: 126 LSFMLENLQKPVVLTGAQVPIHALWSDGRENLLGALLMAGQYVIPEVCLFFQNQLFRGNR 185
Query: 228 TIKTSTYEFDAFISPNCLPLVQVGIEI 254
T K F AF SPN PL VG ++
Sbjct: 186 TTKVDARRFAAFCSPNLPPLATVGADV 212
>sp|P0A962|ASPG1_ECOLI L-asparaginase 1 OS=Escherichia coli (strain K12) GN=ansA PE=1 SV=1
Length = 338
Score = 177 bits (450), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 128/207 (61%), Gaps = 22/207 (10%)
Query: 48 ESRVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPG 107
+ + V YTGGTIGM + G + P S + + P H RP+ ++
Sbjct: 3 KKSIYVAYTGGTIGMQRSEQGYI-PVSGHLQRQLALMPEFH-------RPEMPDF----- 49
Query: 108 LKHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAA 167
+ EY L+DSS+MT +DW +IA D+ +Y+++DGFVILHGTDT+ YTA+A
Sbjct: 50 ---------TIHEYTPLMDSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASA 100
Query: 168 LSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNKLMRGNR 227
LSFM ENLGK VI+TGSQI + + RSDG N + +L +A NY I EVT++F+N+L RGNR
Sbjct: 101 LSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR 160
Query: 228 TIKTSTYEFDAFISPNCLPLVQVGIEI 254
T K FDAF SPN PL++ GI I
Sbjct: 161 TTKAHADGFDAFASPNLPPLLEAGIHI 187
>sp|P0A963|ASPG1_ECO57 L-asparaginase 1 OS=Escherichia coli O157:H7 GN=ansA PE=3 SV=1
Length = 338
Score = 177 bits (450), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 128/207 (61%), Gaps = 22/207 (10%)
Query: 48 ESRVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPG 107
+ + V YTGGTIGM + G + P S + + P H RP+ ++
Sbjct: 3 KKSIYVAYTGGTIGMQRSEQGYI-PVSGHLQRQLALMPEFH-------RPEMPDF----- 49
Query: 108 LKHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAA 167
+ EY L+DSS+MT +DW +IA D+ +Y+++DGFVILHGTDT+ YTA+A
Sbjct: 50 ---------TIHEYTPLMDSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASA 100
Query: 168 LSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNKLMRGNR 227
LSFM ENLGK VI+TGSQI + + RSDG N + +L +A NY I EVT++F+N+L RGNR
Sbjct: 101 LSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR 160
Query: 228 TIKTSTYEFDAFISPNCLPLVQVGIEI 254
T K FDAF SPN PL++ GI I
Sbjct: 161 TTKAHADGFDAFASPNLPPLLEAGIHI 187
>sp|P26900|ASPG1_BACSU L-asparaginase 1 OS=Bacillus subtilis (strain 168) GN=ansA PE=2
SV=1
Length = 329
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 31/196 (15%)
Query: 50 RVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLK 109
++L++ TGGTI + +G LAP ++ + L+ V L N +Y
Sbjct: 3 KLLMLTTGGTIASVEGENG-LAP-------GVKADELLSYVSKLDN-----DY------- 42
Query: 110 HNKRVLYKVLEYDSLL--DSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAA 167
+E SL+ DS+NM + W+ IA V +NY+ +DGFVI HGTDT+ YT+AA
Sbjct: 43 --------TMETQSLMNIDSTNMQPEYWVEIAEAVKENYDAYDGFVITHGTDTMAYTSAA 94
Query: 168 LSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNKLMRGNR 227
LS+M ++ K ++ITGSQI I ++D N ++ A V V V F ++++G R
Sbjct: 95 LSYMLQHAKKPIVITGSQIPITFQKTDAKKNITDAIRFACEGV-GGVYVVFDGRVIQGTR 153
Query: 228 TIKTSTYEFDAFISPN 243
IK T +DAF S N
Sbjct: 154 AIKLRTKSYDAFESIN 169
>sp|Q8TV84|GATD_METKA Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=gatD PE=3 SV=1
Length = 458
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 11/147 (7%)
Query: 118 VLEYDSLLD--SSNMTVDDWINIASDVFDNYENFD--GFVILHGTDTLCYTAAALSFMFE 173
+++ ++LD S NM W+ IA +V D + D G VI HGTDT+ +TAAALSF+ E
Sbjct: 141 IVDARAVLDLLSENMEPKHWMKIAEEVVDALSDPDVEGVVIGHGTDTMAFTAAALSFVIE 200
Query: 174 NLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGN 226
L V++ G+Q S +P SD N IA+ AG+ + EVTV H + RG
Sbjct: 201 GLNGPVVLVGAQRSSDRPSSDAASNLIAACAFAGDGEVGEVTVCMHGWTSDEVCLVHRGV 260
Query: 227 RTIKTSTYEFDAFISPNCLPLVQVGIE 253
R K T DAF S +P+ +V ++
Sbjct: 261 RVRKMHTSRRDAFRSVESIPIAKVDVK 287
>sp|Q9V0T9|GATD_PYRAB Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=gatD PE=1 SV=1
Length = 438
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 127 SSNMTVDDWINIASDVFDNYENFD-GFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQ 185
S +M W+ IA +V + D G V+ HGTDT+ YTAAALSFM NLGK V++ G+Q
Sbjct: 146 SEDMKPKHWVKIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLRNLGKPVVLVGAQ 205
Query: 186 ISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDA 238
S +P SD N I S+ +A + V EV V H + RG + K T DA
Sbjct: 206 RSSDRPSSDAAMNLICSVRMATSEV-AEVMVVMHGETGDTYCLAHRGTKVRKMHTSRRDA 264
Query: 239 FISPNCLPLVQV 250
F S N +P+ ++
Sbjct: 265 FRSINDVPIAKI 276
>sp|Q2NEH1|GATD_METST Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=gatD PE=3 SV=1
Length = 438
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 36/207 (17%)
Query: 53 VIYTGGTIGMIIN-NDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHN 111
++ TGGT+ +I+ G + P F + D LR P+ +Y + N
Sbjct: 95 ILSTGGTVASVIDYKTGAVHPA---FTAD----------DLLRATPELVDYANI-----N 136
Query: 112 KRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDTLCYTAAALSF 170
+ ++ +L S NMT + W A+ ++D N DG +I HGTDT+ YTA+ALSF
Sbjct: 137 AKAIFNIL-------SENMTPEYWKKTATTIYDEINNGADGIIIAHGTDTMHYTASALSF 189
Query: 171 MFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LM 223
M ++ +++TG+Q S +P SD N +AS + A I EVT+ H L
Sbjct: 190 MIDS-PVPIVLTGAQRSSDRPSSDAFTNLMAS-VNAAKSDIAEVTICMHGTEDDSYCDLH 247
Query: 224 RGNRTIKTSTYEFDAFISPNCLPLVQV 250
RG R K T D F S N PL ++
Sbjct: 248 RGTRARKMHTSRRDTFTSINMNPLARI 274
>sp|O59132|GATD_PYRHO Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=gatD PE=3 SV=1
Length = 438
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 127 SSNMTVDDWINIASDVFDNYENFD-GFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQ 185
S +M WI IA +V + + D G V+ HGTDT+ YTAAALSFM +LGK VI+ G+Q
Sbjct: 146 SEDMKPKHWIKIAHEVAKSLNSGDSGVVVAHGTDTMGYTAAALSFMLRDLGKPVILVGAQ 205
Query: 186 ISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDA 238
S +P SD N I S+ ++ + V EV V H + RG + K T DA
Sbjct: 206 RSSDRPSSDAAMNLICSVRMSTSDV-AEVMVVMHGETGDTYCLAHRGTKVRKMHTSRRDA 264
Query: 239 FISPNCLPLVQV 250
F S N +P+ +V
Sbjct: 265 FRSINDVPIAKV 276
>sp|O26802|GATD_METTH Glutamyl-tRNA(Gln) amidotransferase subunit D
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=gatD PE=1 SV=1
Length = 435
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 99/216 (45%), Gaps = 39/216 (18%)
Query: 51 VLVIYTGGTIGMIIN-NDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLK 109
V +I TGGT+ II+ G + P + +R NP + D+ +R R
Sbjct: 93 VSIISTGGTVASIIDYRTGAVHPAFTA-DDLLRANPELLDIANIRGR------------- 138
Query: 110 HNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDTLCYTAAAL 168
++ +L S NM + W+ A V+ ++ DG V+ HGTDT+ YT+AAL
Sbjct: 139 ----AVFNIL-------SENMKPEYWVETARAVYGEIKDGADGVVVAHGTDTMHYTSAAL 187
Query: 169 SFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK------- 221
SFM V+ TG+Q S +P SD N S + A I EVTV H
Sbjct: 188 SFMLRT-PVPVVFTGAQRSSDRPSSDASLNIQCS-VRAATSEIAEVTVCMHATMDDLSCH 245
Query: 222 LMRGNRTIKTSTYEFDAFISPNCLPLVQV---GIEI 254
L RG + K T D F S N LPL +V GI+I
Sbjct: 246 LHRGVKVRKMHTSRRDTFRSMNALPLAEVTPDGIKI 281
>sp|Q46GJ6|GATD_METBF Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=gatD PE=3 SV=1
Length = 424
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 106/243 (43%), Gaps = 46/243 (18%)
Query: 14 SNGIHNDDNGHDEGNGESQSSAEKFRFKNQTESLESRVLVIYTGGTIGMIIN-NDGVLAP 72
+NG N H E Q S +K +V ++ TGGTI I+ G +
Sbjct: 59 TNGGLNGGKEHKTAGEEVQKSGKKL----------PKVAILSTGGTIASKIDYRTGAVTS 108
Query: 73 QSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLLDSSNMTV 132
Q F + D L P+ E G RV+ +L S NM
Sbjct: 109 Q---FTAD----------DILAAIPELREIADFKG-----RVISSIL-------SENMDS 143
Query: 133 DDWINIASDVFDNYE-NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQP 191
+ W N+A + + E DG ++ HGTDT+ YTAAALSFM E ++I GSQ S +P
Sbjct: 144 ESWQNLARAIVEEIEAGADGVIVTHGTDTMMYTAAALSFMIET-PVPIVIVGSQRSADRP 202
Query: 192 RSDGVDNFIASLILAGNYVIPEVTVYFHN-------KLMRGNRTIKTSTYEFDAFISPNC 244
SD N I + ++A + I EV+V H ++ RG + K T DAF S N
Sbjct: 203 SSDNAMNAICAALVAISD-IAEVSVVMHGTTSDDFCEIHRGTKVRKMHTSRRDAFKSINS 261
Query: 245 LPL 247
P+
Sbjct: 262 RPI 264
>sp|A5UK11|GATD_METS3 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=gatD PE=3
SV=1
Length = 436
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 36/209 (17%)
Query: 51 VLVIYTGGTIGMIIN-NDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLK 109
+ +I TGGT+ II+ G + P KF D ++ P+ +Y
Sbjct: 93 ISIISTGGTVSSIIDYRTGAVHP---KFTA----------ADLIKANPELLDYA-----N 134
Query: 110 HNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVF-DNYENFDGFVILHGTDTLCYTAAAL 168
+N + LY +L S NM W+ A + D + DG VI HGTDTL YTAAAL
Sbjct: 135 YNVKALYNIL-------SENMQPKYWVEAAESIANDISDGSDGIVIAHGTDTLHYTAAAL 187
Query: 169 SFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK------- 221
SFM + ++ITG+Q S +P SD N I S ++A I EV+V H
Sbjct: 188 SFMLKT-PVPIVITGAQRSSDRPSSDANMNLIDS-VVAAKSDIAEVSVCMHGSLNDSYTY 245
Query: 222 LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
L +G + K T D F S N P+ ++
Sbjct: 246 LHKGTKVRKMHTSRRDTFRSINYEPIAKI 274
>sp|Q979L8|GATD_THEVO Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=gatD PE=3 SV=1
Length = 406
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 127 SSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQI 186
S NM DWI++A V D ++ G V+ HGTDT+ YT++AL+FMFE L + +I GSQ
Sbjct: 121 SENMKPADWIHLARKVMDETKHSSGIVVSHGTDTMSYTSSALAFMFERLAQPIIFVGSQR 180
Query: 187 SIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAF 239
S +P SD +N ++ A + EV + H L R R+ K T DAF
Sbjct: 181 SSDRPSSDTKENMEGAINFAATD-LGEVGIAMHKGISDGSIVLHRAVRSRKMHTSRRDAF 239
Query: 240 ISPNCLPLVQ 249
S + + L +
Sbjct: 240 ESIDTVHLAE 249
>sp|Q9Y9T8|GATD_AERPE Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=gatD PE=3 SV=1
Length = 427
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 99/221 (44%), Gaps = 45/221 (20%)
Query: 45 ESLESRVLVIYTGGTIGMIINND-GVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYL 103
+ E RV +I GGTI ++ + G + P YL D SE
Sbjct: 70 QPAEERVYIIGAGGTIASRVDYETGAVKP-------------------YL----DASELA 106
Query: 104 A-LPGLKHNKRVLYKVLEYDSLLD--SSNMTVDDW---INIASDVFDNYENFDGFVILHG 157
+P L+ Y +E + L S +M W ++ A+ V + +DG V+ HG
Sbjct: 107 TTIPELQR-----YASIEAEQLFSILSEDMKPSMWEAIVDRAARVLEA--GYDGVVVAHG 159
Query: 158 TDTLCYTAAALSFMF-ENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTV 216
TDT+ +TA+ALSF F + L VI+TGSQ S +P SD N AS++ A EV V
Sbjct: 160 TDTMAFTASALSFAFHKGLPSPVILTGSQRSSDRPSSDAAFNLTASVLAASRAPFAEVAV 219
Query: 217 YFHNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
H + RG R K + DAF S N PL ++
Sbjct: 220 VMHGETGDTYALAHRGVRVKKMHSSRRDAFQSVNDKPLARI 260
>sp|Q9HP20|GATD_HALSA Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=gatD PE=3 SV=1
Length = 427
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 94/207 (45%), Gaps = 38/207 (18%)
Query: 51 VLVIYTGGTIGMIIN-NDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLK 109
+ +I TGGTI ++ G + Q + D LR PD L G
Sbjct: 82 IALISTGGTIASTVDYRTGAVTAQFDAE-------------DVLRAVPD------LAGRA 122
Query: 110 -HNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYE-NFDGFVILHGTDTLCYTAAA 167
+ RV+ +L S NM W ++A+ V + E DG V++HGTDT+ ++A+A
Sbjct: 123 NYRGRVVANIL-------SENMEPSIWQDLAAAVREEIEAGADGVVVMHGTDTMQFSASA 175
Query: 168 LSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHN------- 220
LSFM E V+ TGSQ S +P SD V N + + + A + EV V H
Sbjct: 176 LSFMLETP-VPVVFTGSQRSADRPSSDNVMNAVCA-VEAAKSDVAEVMVCMHATESDDRC 233
Query: 221 KLMRGNRTIKTSTYEFDAFISPNCLPL 247
L RG R KT T DAF + PL
Sbjct: 234 ALHRGTRVRKTHTSRRDAFETVGATPL 260
>sp|B0R6H4|GATD_HALS3 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=gatD
PE=3 SV=1
Length = 427
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 94/207 (45%), Gaps = 38/207 (18%)
Query: 51 VLVIYTGGTIGMIIN-NDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLK 109
+ +I TGGTI ++ G + Q + D LR PD L G
Sbjct: 82 IALISTGGTIASTVDYRTGAVTAQFDAE-------------DVLRAVPD------LAGRA 122
Query: 110 -HNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYE-NFDGFVILHGTDTLCYTAAA 167
+ RV+ +L S NM W ++A+ V + E DG V++HGTDT+ ++A+A
Sbjct: 123 NYRGRVVANIL-------SENMEPSIWQDLAAAVREEIEAGADGVVVMHGTDTMQFSASA 175
Query: 168 LSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHN------- 220
LSFM E V+ TGSQ S +P SD V N + + + A + EV V H
Sbjct: 176 LSFMLETP-VPVVFTGSQRSADRPSSDNVMNAVCA-VEAAKSDVAEVMVCMHATESDDRC 233
Query: 221 KLMRGNRTIKTSTYEFDAFISPNCLPL 247
L RG R KT T DAF + PL
Sbjct: 234 ALHRGTRVRKTHTSRRDAFETVGATPL 260
>sp|Q8U0X0|GATD_PYRFU Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Pyrococcus
furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=gatD PE=3 SV=1
Length = 438
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 127 SSNMTVDDWINIASDVFDNYENF-DGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQ 185
S +M WI IA + + +G VI HGTDT+ YTAAALSFM NL K V++ G+Q
Sbjct: 146 SEDMKPKHWIEIAHETAKALNSGNEGVVIAHGTDTMGYTAAALSFMLRNLTKPVVLVGAQ 205
Query: 186 ISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDA 238
S +P SD N I + +A + EV V H + RG + K T DA
Sbjct: 206 RSSDRPSSDAAMNLICATRMAVSDA-AEVMVVMHGETSDTYCLAHRGTKVRKMHTSRRDA 264
Query: 239 FISPNCLPLVQV 250
F S N +P+ ++
Sbjct: 265 FRSINDIPIAKI 276
>sp|Q5JI77|GATD_PYRKO Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=gatD PE=3 SV=1
Length = 440
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 30 ESQSSAEKFRFKN---QTESLESRVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPL 86
E A K F+ + E L S V ++ TGGTI I+ + +E + P
Sbjct: 73 EKAKEAPKMEFREVLPRKEGLPS-VTILGTGGTIASRIDYKTGAVHAAFTAEELAKAVPE 131
Query: 87 MHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNY 146
+ D+ + ++L+ ++ S +M + W IA +
Sbjct: 132 IFDIANI-----------------TPKLLFNIM-------SEDMKPEYWKKIAHEAAKAL 167
Query: 147 -ENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLIL 205
+ DG VI HGTDT+ YTAAALSFM NL K V++ GSQ S +P SD N I + +
Sbjct: 168 NSDEDGVVIAHGTDTMGYTAAALSFMLRNLTKPVVLVGSQRSSDRPSSDAAMNLICATRM 227
Query: 206 AGNYVIPEVTVYFHNKLM-------RGNRTIKTSTYEFDAFISPNCLPLVQV 250
A + EV V H + RG + K T D F S N +P+ +V
Sbjct: 228 AVSDA-AEVMVVMHGETSDTYCLAHRGTKVRKMHTSRRDTFRSINDVPIAKV 278
>sp|Q8PUM7|GATD_METMA Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=gatD PE=3 SV=1
Length = 425
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 104 ALPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYE-NFDGFVILHGTDTLC 162
A+P LK +K S+L S NM D W N+A V + E DG ++ HGTDT+
Sbjct: 119 AIPELKEIAD--FKGRAISSIL-SENMDPDSWQNLARAVVEEIEAGADGIIVTHGTDTMM 175
Query: 163 YTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHN-- 220
Y+AAALSFM E ++ GSQ S +P SD N I + +A + I EV V H
Sbjct: 176 YSAAALSFMIET-PVPIVFVGSQRSADRPSSDNAMNAICAARVAISD-IAEVVVVMHGTS 233
Query: 221 -----KLMRGNRTIKTSTYEFDAFISPNCLPL 247
++ RG + K T DAF S N LP+
Sbjct: 234 SDDYCEIHRGTKVRKMHTSRRDAFKSVNSLPI 265
>sp|Q18GL3|GATD_HALWD Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Haloquadratum
walsbyi (strain DSM 16790) GN=gatD PE=3 SV=1
Length = 442
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 114/256 (44%), Gaps = 42/256 (16%)
Query: 5 GTNGNIENGSNGIHNDDNGHDEGNGESQSSAEKFRFKNQTESLESRVLVIYTGGTIGMII 64
GT +I + + + + E + S+S+A F ESL + V +I TGGTI +
Sbjct: 62 GTQTDIGSSAGAGADTEADKTESDITSKSAASAVAFD---ESLPT-VSLISTGGTIASTV 117
Query: 65 N-NDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLK-HNKRVLYKVLEYD 122
+ G + Q + D LR PD L G + RV+ +L
Sbjct: 118 DYRTGAVTAQFDAE-------------DVLRAVPD------LAGRANYRGRVVRNIL--- 155
Query: 123 SLLDSSNMTVDDWINIASDVFDNYE-NFDGFVILHGTDTLCYTAAALSFMFENLGKTVII 181
S NMT W ++A+ V D DG V++HGTDT+ Y+A+ALS+M + V+
Sbjct: 156 ----SENMTPAVWQDLAAAVADEIRAGADGVVVMHGTDTMQYSASALSYMLDT-PVPVVF 210
Query: 182 TGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTY 234
TGSQ S +P SD V N + + + A I V V H L RG R K T
Sbjct: 211 TGSQRSADRPSSDNVMNAVCA-VEAATADISGVFVCMHASTADDTCALHRGTRVRKNHTS 269
Query: 235 EFDAFISPNCLPLVQV 250
DAF + P+ ++
Sbjct: 270 RRDAFKTVGATPIGKI 285
>sp|Q8TR66|GATD_METAC Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=gatD PE=3 SV=1
Length = 424
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 104 ALPGLKH----NKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYE-NFDGFVILHGT 158
A+P LK RV+ +L S NM D W N++ V + E DG ++ HGT
Sbjct: 118 AIPELKEIADFKGRVISSIL-------SENMDSDSWQNLSKAVVEEIEAGADGVIVTHGT 170
Query: 159 DTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYF 218
DT+ Y+AAALSFM + ++ GSQ S +P SD N I + +A + I EV V
Sbjct: 171 DTMMYSAAALSFMIKT-PVPIVFVGSQRSADRPSSDNAMNAICAARVAISD-IAEVVVVM 228
Query: 219 HN-------KLMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
H ++ RG + K T DAF S N LP+ V
Sbjct: 229 HGTTSDDFCEIHRGTKVRKLHTSRRDAFKSVNSLPVGTV 267
>sp|A4YHH3|GATD_METS5 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=gatD PE=3 SV=1
Length = 439
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 45 ESLESRVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLA 104
E L +V +I TGGTI S E P + + +R P+ E +
Sbjct: 84 ELLPGKVKIISTGGTI------------VSKVEYETGAVRPALSTEEIIRFVPEIQEITS 131
Query: 105 LPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNY-ENFDGFVILHGTDTLCY 163
+ + +L+ +L S NM + W+ IA V + E +G V+ HGTDT+ Y
Sbjct: 132 I-----SAEILFSIL-------SENMKPEFWVKIAEAVKRAFDEGSEGVVVAHGTDTMSY 179
Query: 164 TAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-- 221
TAAAL+F + L V++ GSQ S +P SD N ++S++LA EV V H +
Sbjct: 180 TAAALAFSIQRLPGPVVLVGSQRSSDRPSSDSGINLVSSVLLAKEAPFGEVVVNMHGESS 239
Query: 222 -----LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
RG + K T DAF S N PL +V
Sbjct: 240 DTYTLAHRGVKVRKMHTSRRDAFQSINDHPLAKV 273
>sp|A1RX40|GATD_THEPD Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Thermofilum
pendens (strain Hrk 5) GN=gatD PE=3 SV=1
Length = 451
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 102 YLALPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINIAS---DVFDNYENFDGFVILHGT 158
Y +P LK R+ + L + S +MT W +AS ++F + G V+ HGT
Sbjct: 131 YSMIPELKRLARISSETLFS---IFSEDMTPSHWQQLASKIGEIFRRESDVKGVVVAHGT 187
Query: 159 DTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYF 218
DTL Y+AAA++F + ++ G+Q S +P SD N I + ++A + E +
Sbjct: 188 DTLHYSAAAMAFAVQEAPGPIVFVGAQRSSDRPSSDAALNVIGATVVAVHAPFAESVIAM 247
Query: 219 HNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
H + RG R K T DAF+S N P+ +V
Sbjct: 248 HGSVNDDTILVHRGVRARKMHTSRRDAFMSINSKPIAEV 286
>sp|Q4J955|GATD_SULAC Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=gatD PE=3 SV=1
Length = 446
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 105 LPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYENFD-GFVILHGTDTLCY 163
+P +K R+ ++L S+L S NM + WI IA + + + G VI HGTDT+ Y
Sbjct: 125 MPEIKEIARIDAEIL--FSIL-SENMKPEYWIKIAEEAKKALDKGNKGVVIAHGTDTMAY 181
Query: 164 TAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-- 221
T+AALSF F + +++ GSQ S +P SD N + S+++A N EV V H +
Sbjct: 182 TSAALSFSFRKMTGPIVLVGSQRSSDRPSSDSSMNLLTSILVAKNAPFGEVVVNMHGESS 241
Query: 222 -----LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
+ RG + K T DAF S N LPL +V
Sbjct: 242 DTYTLVHRGVKVRKMHTSRRDAFQSINDLPLAKV 275
>sp|Q9HJJ5|GATD_THEAC Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=gatD PE=3 SV=1
Length = 409
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 127 SSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQI 186
S N+ DWI I V D DG V+ HGTDT+ YT++AL+FMFE + V+ G+Q
Sbjct: 121 SENLKPADWIRIGQAVADESSEADGVVVAHGTDTMAYTSSALAFMFERMRVPVVFVGAQR 180
Query: 187 SIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHN-------KLMRGNRTIKTSTYEFDAF 239
S +P SD +N A++ AG + EV + H L+R R+ K T DAF
Sbjct: 181 SSDRPSSDSRENMQAAINFAGTD-LGEVGISMHASTSDGHVSLLRSVRSRKMHTSRRDAF 239
Query: 240 ISPNCLPLVQ 249
S PL +
Sbjct: 240 ESIGIPPLAE 249
>sp|Q12X65|GATD_METBU Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcoides
burtonii (strain DSM 6242) GN=gatD PE=3 SV=1
Length = 415
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 104 ALPGLKH----NKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158
A+P L N RVLY +L S NM + W +A V EN DG +I HGT
Sbjct: 109 AIPELTEIADINGRVLYNIL-------SENMKAEYWTELAGAVAQEIENGADGIIIAHGT 161
Query: 159 DTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYF 218
DT+ Y+AAALSFM + V+ GSQ S +P SD N I + +A + I EV V
Sbjct: 162 DTMMYSAAALSFMLKT-PVPVVFVGSQRSADRPSSDNAMNAICATKVAVSD-IAEVCVVM 219
Query: 219 HN-------KLMRGNRTIKTSTYEFDAFISPNCLPL 247
H+ + G + K T DAF S N P+
Sbjct: 220 HDTTSDDRCAIHFGTKVRKMHTSRRDAFQSINSDPI 255
>sp|O29380|GATD_ARCFU Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=gatD PE=3 SV=1
Length = 418
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 127 SSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQI 186
S NM ++WI +A V+ ++ +G +I HGTDT+ ++AAALSFM K V+ G+Q
Sbjct: 135 SENMKPENWIELARHVYKALKDHEGVIITHGTDTMHFSAAALSFMLST-PKPVVFVGAQR 193
Query: 187 SIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAF 239
S +P SD N + + A I EV V H + RG + K T DAF
Sbjct: 194 SSDRPSSDAAMNLLCA-AKAATEDIGEVVVCMHGSTSDDYCLVHRGVKVRKNHTSRRDAF 252
Query: 240 ISPNCLPLVQV 250
S N P+ ++
Sbjct: 253 QSVNAKPIGRI 263
>sp|Q971W5|GATD_SULTO Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 /
7) GN=gatD PE=3 SV=1
Length = 448
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 15/150 (10%)
Query: 109 KHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYENFD-GFVILHGTDTLCYTAAA 167
K + VL+ +L S NM + WI IA + + G VI HGTDT+ YTA+A
Sbjct: 135 KIDAEVLFSIL-------SENMKPEYWIKIAESAKKALDEGNLGVVIAHGTDTMAYTASA 187
Query: 168 LSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK------ 221
L+F F++L +++ GSQ S +P SD N +++++A N EVT+ H +
Sbjct: 188 LAFSFKSLTGPIVLVGSQRSSDRPSSDSPINLYSAILVAKNSPFAEVTINMHGESSDTYT 247
Query: 222 -LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
+ RG + K T DAF S N +PL +V
Sbjct: 248 LVHRGVKVRKMHTSRRDAFQSINDIPLAKV 277
>sp|Q8ZY04|GATD_PYRAE Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Pyrobaculum
aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM
9630 / NBRC 100827) GN=gatD PE=3 SV=1
Length = 417
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 127 SSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQ 185
S +MT W IA V + ++ G V+LHGTDT+ YTAAAL+F F++ + + G+Q
Sbjct: 125 SEDMTPALWGVIAERVAEAFKKGARGVVVLHGTDTMQYTAAALAFAFKSAPGPIALVGAQ 184
Query: 186 ISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHN-------KLMRGNRTIKTSTYEFDA 238
S +P +D V N A++ + E V H + RG R K T D
Sbjct: 185 RSSDRPSTDAVLNLKAAIAVTARAPFAESVVVMHKTSGDTVVAVHRGTRVRKMHTSRRDT 244
Query: 239 FISPNCLPLVQ 249
F S N P+ +
Sbjct: 245 FQSINTTPIAE 255
>sp|A6UPR4|GATD_METVS Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=gatD
PE=3 SV=1
Length = 426
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 70 LAPQSNKFKE-NIRQNPLMHDVDYLR------NRPDKSEYLALPGLKHNK--RVLYKVLE 120
L +N+FK N+ +NP + ++ L +R D P N R + ++L+
Sbjct: 63 LTSSNNEFKPLNLEKNPNLKNISILSTGGTVASRVDYKTGAVHPAFTANDLIRAVPELLD 122
Query: 121 YDSL-------LDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDTLCYTAAALSFMF 172
++ + S NM W+ A + + EN +G VI HGTDT+ YTAAALSFM
Sbjct: 123 IANIKGRAILNILSENMLPKYWVMTAEAIKEEIENGAEGIVITHGTDTMHYTAAALSFMV 182
Query: 173 ENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRG 225
E+ +I+ G+Q S +P SD N I S ++A I V V H + L G
Sbjct: 183 ES-EVPIILVGAQRSSDRPSSDAALNII-SAVMAATEPIKGVYVVMHGEIDDTICNLHEG 240
Query: 226 NRTIKTSTYEFDAFISPNCLPLVQV 250
+ K + DAF S N P+ ++
Sbjct: 241 VKVRKLHSSRRDAFKSVNNTPVAKI 265
>sp|P61400|GATD_METMP Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain S2 / LL) GN=gatD PE=3 SV=1
Length = 418
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 127 SSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQ 185
S NM W+ A + + EN +G VI HGTDT+ YTA+ALSFM N +I+ G+Q
Sbjct: 128 SENMLPKYWVMTADAIKEEIENGAEGIVIAHGTDTMHYTASALSFMV-NSEVPIILVGAQ 186
Query: 186 ISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDA 238
S +P SD N IA+ + A I V V H + L G + K + DA
Sbjct: 187 RSSDRPSSDAALNIIAA-VKAATEPIKGVYVLMHGETGDTVCHLHEGTKVRKLHSSRRDA 245
Query: 239 FISPNCLPLVQV 250
F S N P+ +V
Sbjct: 246 FKSVNETPIAEV 257
>sp|Q97ZH5|GATD_SULSO Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=gatD PE=3 SV=1
Length = 444
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 109 KHNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNY-ENFDGFVILHGTDTLCYTAAA 167
K + VL+ +L S NM + W+ IA V + E G VI HGTDT+ YTA+A
Sbjct: 135 KVDAEVLFSIL-------SENMKPEFWVKIAESVKKAFDEGNTGIVIAHGTDTMAYTASA 187
Query: 168 LSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK------ 221
L+F +L V++ GSQ S +P SD N ++++I A EV V H +
Sbjct: 188 LAFSLRSLQGPVVLVGSQRSSDRPSSDSAINLLSAVITAKYAPFGEVVVNMHAESSDTYA 247
Query: 222 -LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
+ RG + K + DAF S N PL +V
Sbjct: 248 LVHRGVKVRKMHSSRRDAFQSVNDKPLAKV 277
>sp|A9AA46|GATD_METM6 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=gatD PE=3
SV=1
Length = 418
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 127 SSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQ 185
S NM W A + + EN +G VI HGTDT+ YTA+ALSFM + +I+ G+Q
Sbjct: 128 SENMLPKYWAMTAEAIKEEIENGAEGIVIAHGTDTMHYTASALSFMVTS-EVPIILVGAQ 186
Query: 186 ISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDA 238
S +P SD N IA+ + A I V V H + L G + K + DA
Sbjct: 187 RSSDRPSSDAALNIIAA-VKAATEPIKGVYVLMHGETGDTVCHLHEGTKVRKLHSSRRDA 245
Query: 239 FISPNCLPLVQV 250
F S N P+ +V
Sbjct: 246 FKSVNKTPIAEV 257
>sp|A6VGK5|GATD_METM7 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=gatD PE=3
SV=1
Length = 418
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 127 SSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQ 185
S NM W+ A + + EN +G VI HGTDT+ YTA+ALSFM N +I+ G+Q
Sbjct: 128 SENMLPKYWVMTAEAIKEEIENGAEGIVIAHGTDTMHYTASALSFMV-NSEVPIILVGAQ 186
Query: 186 ISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDA 238
S +P SD N I S + A I V V H + L G + K + DA
Sbjct: 187 RSSDRPSSDAALNII-SAVKAATEPIKGVYVLMHGETGDTVCHLHEGTKVRKLHSSRRDA 245
Query: 239 FISPNCLPLVQV 250
F S N P ++
Sbjct: 246 FKSVNKTPFAEI 257
>sp|C3MPS1|GATD_SULIL Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain L.S.2.15 / Lassen #1) GN=gatD PE=3
SV=1
Length = 445
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 24/240 (10%)
Query: 21 DNGHDEGNGESQSSAEKFRFKNQTESLESRVLVIYTGGTIG--MIINNDGVLAPQSNKFK 78
DNG++ G S K KN +++ ES + G II+ G + +
Sbjct: 53 DNGYNIGISIDNISEIKLITKNSSKAQESERKEVSRNGAKSEIKIISTGGTIVSKVEYET 112
Query: 79 ENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINI 138
+R P + + ++ P+ +E K + VL+ +L S NM + W+ I
Sbjct: 113 GAVR--PALTTEEIVQFLPEINEIA-----KVDAEVLFSIL-------SENMKPEYWVKI 158
Query: 139 ASDVFDNY-ENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVD 197
A V + E G VI HGTDT+ YTA+AL+F +L V++ GSQ S +P SD
Sbjct: 159 AESVKKAFGEGNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAI 218
Query: 198 NFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
N ++++ A EV V H + RG + K + DAF S N PL +V
Sbjct: 219 NLLSAVTTAKYAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV 278
>sp|C3N5E7|GATD_SULIA Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain M.16.27) GN=gatD PE=3 SV=1
Length = 445
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 24/240 (10%)
Query: 21 DNGHDEGNGESQSSAEKFRFKNQTESLESRVLVIYTGGTIG--MIINNDGVLAPQSNKFK 78
DNG++ G S K KN +++ ES + G II+ G + +
Sbjct: 53 DNGYNIGISIDNISEIKLITKNSSKAQESERKEVSRNGAKSEIKIISTGGTIVSKVEYET 112
Query: 79 ENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINI 138
+R P + + ++ P+ +E K + VL+ +L S NM + W+ I
Sbjct: 113 GAVR--PALTTEEIVQFLPEINEIA-----KVDAEVLFSIL-------SENMKPEYWVKI 158
Query: 139 ASDVFDNY-ENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVD 197
A V + E G VI HGTDT+ YTA+AL+F +L V++ GSQ S +P SD
Sbjct: 159 AESVKKAFDEGNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAI 218
Query: 198 NFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
N ++++ A EV V H + RG + K + DAF S N PL +V
Sbjct: 219 NLLSAVTTAKYAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV 278
>sp|C3NE01|GATD_SULIY Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain Y.G.57.14 / Yellowstone #1) GN=gatD
PE=3 SV=1
Length = 445
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 24/240 (10%)
Query: 21 DNGHDEGNGESQSSAEKFRFKNQTESLESRVLVIYTGGTIG--MIINNDGVLAPQSNKFK 78
DNG++ G S K KN +++ ES + G II+ G + +
Sbjct: 53 DNGYNIGISIDNISEIKLITKNSSKAQESERKEVSRNGAKSEIKIISTGGTIVSKVEYET 112
Query: 79 ENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINI 138
+R P + + ++ P+ +E K + VL+ +L S NM + W+ I
Sbjct: 113 GAVR--PALTTEEIVQFLPEINEIA-----KVDAEVLFSIL-------SENMKPEYWVKI 158
Query: 139 ASDVFDNY-ENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVD 197
A V + E G VI HGTDT+ YTA+AL+F +L V++ GSQ S +P SD
Sbjct: 159 AESVKKAFDEGNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAI 218
Query: 198 NFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
N ++++ A EV V H + RG + K + DAF S N PL +V
Sbjct: 219 NLLSAVTTAKYAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV 278
>sp|C3NHQ2|GATD_SULIN Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain Y.N.15.51 / Yellowstone #2) GN=gatD
PE=3 SV=1
Length = 445
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 24/240 (10%)
Query: 21 DNGHDEGNGESQSSAEKFRFKNQTESLESRVLVIYTGGTIG--MIINNDGVLAPQSNKFK 78
DNG++ G S K KN +++ ES + G II+ G + +
Sbjct: 53 DNGYNIGISIDNISEIKLITKNSSKAQESERKEVSRNGAKSEIKIISTGGTIVSKVEYET 112
Query: 79 ENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINI 138
+R P + + ++ P+ +E K + VL+ +L S NM + W+ I
Sbjct: 113 GAVR--PALTTEEIVQFLPEINEIA-----KVDAEVLFSIL-------SENMKPEYWVKI 158
Query: 139 ASDVFDNY-ENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVD 197
A V + E G VI HGTDT+ YTA+AL+F +L V++ GSQ S +P SD
Sbjct: 159 AESVKKAFDEGNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAI 218
Query: 198 NFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
N ++++ A EV V H + RG + K + DAF S N PL +V
Sbjct: 219 NLLSAVTTAKYAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV 278
>sp|C3MYR5|GATD_SULIM Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain M.14.25 / Kamchatka #1) GN=gatD PE=3
SV=1
Length = 445
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 24/240 (10%)
Query: 21 DNGHDEGNGESQSSAEKFRFKNQTESLESRVLVIYTGGTIG--MIINNDGVLAPQSNKFK 78
DNG++ G S K KN +++ ES + G II+ G + +
Sbjct: 53 DNGYNIGISIDNISEIKLITKNSSKAQESERKEVSRNGAKSEIKIISTGGTIVSKVEYET 112
Query: 79 ENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINI 138
+R P + + ++ P+ +E K + VL+ +L S NM + W+ I
Sbjct: 113 GAVR--PALTTEEIVQFLPEINEIA-----KVDAEVLFSIL-------SENMKPEYWVKI 158
Query: 139 ASDVFDNY-ENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVD 197
A V + E G VI HGTDT+ YTA+AL+F +L V++ GSQ S +P SD
Sbjct: 159 AESVKKAFDEGNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAI 218
Query: 198 NFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
N ++++ A EV V H + RG + K + DAF S N PL +V
Sbjct: 219 NLLSAVTTAKYAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV 278
>sp|C4KH13|GATD_SULIK Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain M.16.4 / Kamchatka #3) GN=gatD PE=3
SV=1
Length = 445
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 24/240 (10%)
Query: 21 DNGHDEGNGESQSSAEKFRFKNQTESLESRVLVIYTGGTIG--MIINNDGVLAPQSNKFK 78
DNG++ G S K KN +++ ES + G II+ G + +
Sbjct: 53 DNGYNIGISIDNISEIKLITKNSSKAQESERKEVSRNGAKSEIKIISTGGTIVSKVEYET 112
Query: 79 ENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLLDSSNMTVDDWINI 138
+R P + + ++ P+ +E K + VL+ +L S NM + W+ I
Sbjct: 113 GAVR--PALTTEEIVQFLPEINEIA-----KVDAEVLFSIL-------SENMKPEYWVKI 158
Query: 139 ASDVFDNY-ENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVD 197
A V + E G VI HGTDT+ YTA+AL+F +L V++ GSQ S +P SD
Sbjct: 159 AESVKKAFDEGNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAI 218
Query: 198 NFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
N ++++ A EV V H + RG + K + DAF S N PL +V
Sbjct: 219 NLLSAVTTAKYAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV 278
>sp|Q60331|GATD_METJA Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=gatD PE=3 SV=1
Length = 417
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 150 DGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNY 209
DG VI HGTDT+ YTA+ALSFM + +I+ G+Q S +P SD N I S +LA
Sbjct: 152 DGIVIAHGTDTMSYTASALSFMVK-ADVPIILVGAQRSSDRPSSDAALNLI-SAVLAARE 209
Query: 210 VIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQV 250
I V V H + L +G + K + DAF S N +P+ ++
Sbjct: 210 PIKGVYVVMHGESGDTFCYLHKGVKVRKCHSSRRDAFKSINSIPVAKI 257
>sp|A4FWR5|GATD_METM5 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=gatD PE=3
SV=1
Length = 418
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 127 SSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQ 185
S NM W A + + EN +G VI HGTDT+ YTA+ALSFM + +I+ G+Q
Sbjct: 128 SENMLPAYWKMTADAIKEEIENGAEGIVIAHGTDTMHYTASALSFMVTS-EVPIILVGAQ 186
Query: 186 ISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDA 238
S +P SD N IA+ + A I V V H + L G + K + DA
Sbjct: 187 RSSDRPSSDAALNIIAA-VKAATEPIKGVYVLMHGETGDTVCHLHEGTKVRKLHSSRRDA 245
Query: 239 FISPNCLPLVQV 250
F S N P+ ++
Sbjct: 246 FKSVNETPIAEI 257
>sp|P61401|GATD_NANEQ Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Nanoarchaeum
equitans (strain Kin4-M) GN=gatD PE=3 SV=1
Length = 392
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 44/209 (21%)
Query: 54 IYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRP----DKSEYLALPGLK 109
IYTGGTIG VDYL D E LA+ L
Sbjct: 73 IYTGGTIG--------------------------SKVDYLTGGVSAIMDIEELLAIADLP 106
Query: 110 HNKRVLYKVLEYDSLLDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDTLCYTAAAL 168
++ K+++ + S ++ DW+ I + Y+ +G ++ HGTDT+ +++A
Sbjct: 107 YD----IKIIDSPFVKFSEDLNPKDWVEIVKSIERTYKKGAEGIIVAHGTDTMHFSSAYA 162
Query: 169 SFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPEVTVYFHNKL------ 222
+ EN + TG+Q S + +D V N AS I A N I EV + H +
Sbjct: 163 YYALEN-PIPIAFTGAQRSSDRASTDAVINLFASSIYA-NSNIGEVAIVMHETINDDTAI 220
Query: 223 -MRGNRTIKTSTYEFDAFISPNCLPLVQV 250
+RG K + DAF S N PL ++
Sbjct: 221 AIRGISARKMHSTRRDAFKSINEEPLARI 249
>sp|P63627|ASPG_MYCTU Probable L-asparaginase OS=Mycobacterium tuberculosis GN=ansA PE=3
SV=1
Length = 315
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 110 HNKRVLYKVLEYDS--------LLDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDT 160
H L L+ DS LDSS +T DW I + V + + DG VI HGTDT
Sbjct: 27 HCGATLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDT 86
Query: 161 LCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNF 199
L TA L + + V++TG+ +S P +DG N
Sbjct: 87 LEETALWLDLTYAG-SRPVVLTGAMLSADAPGADGPANL 124
>sp|P63628|ASPG_MYCBO Probable L-asparaginase OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=ansA PE=3 SV=1
Length = 315
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 110 HNKRVLYKVLEYDS--------LLDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGTDT 160
H L L+ DS LDSS +T DW I + V + + DG VI HGTDT
Sbjct: 27 HCGATLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDT 86
Query: 161 LCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNF 199
L TA L + + V++TG+ +S P +DG N
Sbjct: 87 LEETALWLDLTYAG-SRPVVLTGAMLSADAPGADGPANL 124
>sp|P43843|ASPG2_HAEIN Probable L-asparaginase periplasmic OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ansB PE=1
SV=1
Length = 349
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 125 LDSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGS 184
+ S +M + W+ +A + ++ DGFVI HGTDT+ TA L + K V++ G+
Sbjct: 79 IGSQDMNDEVWLKLAKAINAQCKSTDGFVITHGTDTMEETAYFLDLTVK-CEKPVVLVGA 137
Query: 185 QISIFQPRSDGVDNFIASLILAGNYVIP--EVTVYFHNKLMRGNRTIKTSTYEFDAFISP 242
+ +DG N ++++A + V V +N+++ KTST F SP
Sbjct: 138 MRPATEKSADGPLNLYNAVVVAADKKSSGRGVLVAMNNEVLGARDVTKTSTTAVQTFHSP 197
Query: 243 N 243
N
Sbjct: 198 N 198
>sp|P00805|ASPG2_ECOLI L-asparaginase 2 OS=Escherichia coli (strain K12) GN=ansB PE=1 SV=2
Length = 348
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 125 LDSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGS 184
+ S +M + W+ +A + + + DGFVI HGTDT+ TA L + K V++ G+
Sbjct: 78 IGSQDMNDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVK-CDKPVVMVGA 136
Query: 185 QISIFQPRSDGVDNFIASLILAGNYVIPE--VTVYFHNKLMRGNRTIKTSTYEFDAFISP 242
+DG N +++ A + V V ++ ++ G KT+T + F S
Sbjct: 137 MRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSV 196
Query: 243 NCLPL 247
N PL
Sbjct: 197 NYGPL 201
>sp|P38986|ASPG1_YEAST L-asparaginase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ASP1 PE=1 SV=1
Length = 381
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 119 LEYDSL--LDSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLG 176
+EY+ L +DS ++ D I V ++ + FDG VI HGTDTL TA + +
Sbjct: 100 IEYEQLCNVDSKDINEDILYKIYKGVSESLQAFDGIVITHGTDTLSETAFFIESTIDAGD 159
Query: 177 KTVIITGSQISIFQPRSDGVDNFIASLILAGNYVIPE-----VTVYFHNKLMRGNRTIKT 231
++ GS +DG N ++ +A N P+ V V ++++ G KT
Sbjct: 160 VPIVFVGSMRPSTSVSADGPMNLYQAICIASN---PKSRGRGVLVSLNDQISSGYYITKT 216
Query: 232 STYEFDAF 239
+ D+F
Sbjct: 217 NANSLDSF 224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,051,351
Number of Sequences: 539616
Number of extensions: 4129530
Number of successful extensions: 13097
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 12542
Number of HSP's gapped (non-prelim): 544
length of query: 255
length of database: 191,569,459
effective HSP length: 115
effective length of query: 140
effective length of database: 129,513,619
effective search space: 18131906660
effective search space used: 18131906660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)