Query psy12401
Match_columns 255
No_of_seqs 167 out of 1320
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 18:18:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12401.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12401hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2him_A L-asparaginase 1; hydro 100.0 1.1E-57 3.8E-62 428.6 17.7 187 46-254 21-207 (358)
2 1nns_A L-asparaginase II; amid 100.0 1.7E-56 5.7E-61 415.7 19.0 180 48-252 1-184 (326)
3 1wsa_A Asparaginase, asparagin 100.0 2.3E-56 7.8E-61 415.4 19.8 182 46-252 1-188 (330)
4 2wlt_A L-asparaginase; hydrola 100.0 3.2E-56 1.1E-60 414.7 19.2 182 46-252 3-190 (332)
5 1o7j_A L-asparaginase; atomic 100.0 8E-56 2.7E-60 411.3 19.6 181 47-252 3-190 (327)
6 1wls_A L-asparaginase; structu 100.0 6.9E-56 2.4E-60 412.0 18.6 174 50-251 2-175 (328)
7 3nxk_A Cytoplasmic L-asparagin 100.0 2.8E-55 9.6E-60 409.0 18.4 186 41-252 1-193 (334)
8 1agx_A Glutaminase-asparaginas 100.0 6.5E-55 2.2E-59 405.8 19.7 179 48-252 1-186 (331)
9 1zq1_A Glutamyl-tRNA(Gln) amid 100.0 2E-54 7E-59 415.4 20.1 182 45-252 88-278 (438)
10 4pga_A Glutaminase-asparaginas 100.0 2.1E-54 7.2E-59 403.5 17.9 181 46-252 7-194 (337)
11 2d6f_A Glutamyl-tRNA(Gln) amid 100.0 2.2E-54 7.4E-59 414.9 17.7 181 45-252 87-276 (435)
12 2csu_A 457AA long hypothetical 68.4 25 0.00086 33.1 9.6 19 45-63 290-308 (457)
13 3bq9_A Predicted rossmann fold 62.8 4.5 0.00015 38.9 3.2 36 149-184 246-286 (460)
14 2dwu_A Glutamate racemase; iso 53.4 44 0.0015 29.1 7.8 47 130-180 49-97 (276)
15 2jfn_A Glutamate racemase; cel 53.4 33 0.0011 30.1 7.1 48 130-181 63-113 (285)
16 2a33_A Hypothetical protein; s 51.2 12 0.00039 32.2 3.6 51 148-203 109-161 (215)
17 3kqf_A Enoyl-COA hydratase/iso 50.2 54 0.0019 28.2 7.9 32 128-159 31-63 (265)
18 2gzm_A Glutamate racemase; enz 50.0 46 0.0016 28.7 7.4 48 130-181 45-94 (267)
19 3gh1_A Predicted nucleotide-bi 49.1 12 0.00041 36.0 3.6 36 149-184 248-288 (462)
20 2oho_A Glutamate racemase; iso 48.6 83 0.0028 27.2 8.8 48 130-181 54-103 (273)
21 1wek_A Hypothetical protein TT 47.7 12 0.0004 32.2 3.1 35 149-183 132-169 (217)
22 3out_A Glutamate racemase; str 47.0 38 0.0013 29.6 6.4 53 125-181 44-99 (268)
23 3pzy_A MOG; ssgcid, seattle st 46.5 16 0.00054 29.7 3.6 26 132-158 50-76 (164)
24 3ot6_A Enoyl-COA hydratase/iso 46.3 89 0.003 26.3 8.5 40 118-159 18-57 (232)
25 2jfz_A Glutamate racemase; cel 46.1 45 0.0016 28.5 6.7 47 130-180 42-90 (255)
26 1zuw_A Glutamate racemase 1; ( 45.3 61 0.0021 28.1 7.4 47 130-180 45-94 (272)
27 3pea_A Enoyl-COA hydratase/iso 45.1 81 0.0028 27.0 8.2 40 118-158 18-58 (261)
28 3s81_A Putative aspartate race 44.8 21 0.00071 31.3 4.3 28 148-180 99-126 (268)
29 2mas_A Inosine-uridine nucleos 43.9 42 0.0014 29.9 6.2 60 129-190 9-72 (314)
30 3jy6_A Transcriptional regulat 43.6 40 0.0014 27.9 5.7 69 131-207 48-119 (276)
31 3r6h_A Enoyl-COA hydratase, EC 42.9 92 0.0031 26.2 8.0 41 118-159 17-57 (233)
32 3rfq_A Pterin-4-alpha-carbinol 42.1 28 0.00095 29.1 4.5 28 132-159 72-100 (185)
33 3gdw_A Sigma-54 interaction do 42.1 70 0.0024 25.3 6.7 63 149-219 5-71 (139)
34 1ydh_A AT5G11950; structural g 42.1 21 0.0007 30.6 3.7 48 149-201 106-155 (216)
35 3qua_A Putative uncharacterize 40.9 26 0.00088 29.7 4.1 48 149-201 118-167 (199)
36 3l3s_A Enoyl-COA hydratase/iso 40.5 1.5E+02 0.0051 25.3 9.1 41 118-159 19-60 (263)
37 1t35_A Hypothetical protein YV 40.3 20 0.00067 30.0 3.3 48 149-201 98-147 (191)
38 2ppy_A Enoyl-COA hydratase; be 40.1 1.3E+02 0.0043 25.7 8.6 39 117-156 20-60 (265)
39 2a7k_A CARB; crotonase, antibi 39.8 1.3E+02 0.0046 25.3 8.7 30 127-156 21-52 (250)
40 3sbx_A Putative uncharacterize 39.4 28 0.00097 29.2 4.1 48 149-201 109-158 (189)
41 3ist_A Glutamate racemase; str 39.2 63 0.0021 28.3 6.5 51 126-180 43-95 (269)
42 4f2d_A L-arabinose isomerase; 39.0 29 0.00099 33.4 4.6 68 130-202 55-126 (500)
43 4di1_A Enoyl-COA hydratase ECH 38.5 1.1E+02 0.0039 26.5 8.1 41 118-159 36-77 (277)
44 1y5e_A Molybdenum cofactor bio 37.5 53 0.0018 26.4 5.4 27 132-158 54-82 (169)
45 1mkz_A Molybdenum cofactor bio 37.2 46 0.0016 27.0 5.0 27 132-158 51-79 (172)
46 2is8_A Molybdopterin biosynthe 37.2 28 0.00095 28.0 3.6 27 132-158 44-72 (164)
47 1weh_A Conserved hypothetical 36.8 21 0.0007 29.3 2.8 34 149-183 98-134 (171)
48 3p5m_A Enoyl-COA hydratase/iso 35.8 51 0.0018 28.2 5.3 32 128-159 28-60 (255)
49 3lft_A Uncharacterized protein 35.1 45 0.0015 28.1 4.8 47 131-187 47-94 (295)
50 2pbq_A Molybdenum cofactor bio 34.8 40 0.0014 27.5 4.3 27 132-158 50-78 (178)
51 2vvt_A Glutamate racemase; iso 34.7 1.1E+02 0.0038 26.7 7.4 47 131-181 67-115 (290)
52 3uhf_A Glutamate racemase; str 34.5 92 0.0031 27.4 6.9 47 130-180 66-114 (274)
53 2fbm_A Y chromosome chromodoma 34.3 1.3E+02 0.0043 26.4 7.7 32 127-158 45-76 (291)
54 1gqo_A Dehydroquinase; dehydra 33.6 38 0.0013 27.6 3.8 44 135-180 53-96 (143)
55 3gx1_A LIN1832 protein; APC633 32.9 1.4E+02 0.0047 23.1 7.0 63 149-219 5-69 (130)
56 2vx2_A Enoyl-COA hydratase dom 31.9 1.4E+02 0.0049 25.9 7.7 31 128-158 55-86 (287)
57 1rcu_A Conserved hypothetical 31.8 64 0.0022 27.1 5.1 30 148-182 118-148 (195)
58 1uqr_A 3-dehydroquinate dehydr 31.7 35 0.0012 28.2 3.3 44 135-180 54-97 (154)
59 3he2_A Enoyl-COA hydratase ECH 30.8 95 0.0033 26.9 6.3 32 128-159 43-74 (264)
60 3lkv_A Uncharacterized conserv 30.7 48 0.0016 28.5 4.3 50 131-189 54-103 (302)
61 4fzw_A 2,3-dehydroadipyl-COA h 30.6 60 0.0021 27.9 4.9 32 128-159 27-59 (258)
62 3rht_A (gatase1)-like protein; 30.4 66 0.0023 28.1 5.2 34 125-162 59-92 (259)
63 2qh8_A Uncharacterized protein 30.3 42 0.0014 28.5 3.8 48 131-187 54-101 (302)
64 2jfq_A Glutamate racemase; cel 30.3 1.7E+02 0.0057 25.5 7.8 49 129-181 63-113 (286)
65 3i47_A Enoyl COA hydratase/iso 30.0 1.5E+02 0.0053 25.4 7.5 31 128-158 26-57 (268)
66 1gtz_A 3-dehydroquinate dehydr 29.9 46 0.0016 27.5 3.8 43 136-180 60-103 (156)
67 2gtr_A CDY-like, chromodomain 29.6 1.1E+02 0.0038 26.1 6.4 32 127-158 27-58 (261)
68 2iz6_A Molybdenum cofactor car 29.4 35 0.0012 28.2 3.1 31 149-184 108-139 (176)
69 1tv5_A Dhodehase, dihydroorota 29.3 97 0.0033 29.3 6.4 30 127-158 305-334 (443)
70 1di6_A MOGA, molybdenum cofact 29.2 55 0.0019 27.3 4.3 27 132-158 48-76 (195)
71 3g64_A Putative enoyl-COA hydr 28.8 1.3E+02 0.0044 26.0 6.8 31 128-158 39-70 (279)
72 3tb6_A Arabinose metabolism tr 28.5 30 0.001 28.6 2.5 71 131-204 56-130 (298)
73 2c4w_A 3-dehydroquinate dehydr 28.5 50 0.0017 27.8 3.8 44 135-180 64-108 (176)
74 4fzw_C 1,2-epoxyphenylacetyl-C 28.5 1.5E+02 0.0051 25.6 7.1 32 128-159 37-69 (274)
75 1b73_A Glutamate racemase; iso 28.2 80 0.0027 26.9 5.3 48 130-181 42-91 (254)
76 3k4h_A Putative transcriptiona 28.2 2.4E+02 0.0083 22.9 8.3 66 148-218 69-138 (292)
77 3n8k_A 3-dehydroquinate dehydr 28.1 37 0.0013 28.5 2.9 43 136-180 82-124 (172)
78 3lwz_A 3-dehydroquinate dehydr 28.1 33 0.0011 28.3 2.5 43 136-180 61-103 (153)
79 3d02_A Putative LACI-type tran 27.9 1.7E+02 0.0059 24.0 7.2 52 129-185 44-95 (303)
80 1sg4_A 3,2-trans-enoyl-COA iso 27.9 1.9E+02 0.0066 24.5 7.7 39 118-158 17-57 (260)
81 2uyg_A 3-dehydroquinate dehydr 27.9 51 0.0017 27.0 3.7 44 135-180 52-96 (149)
82 3clk_A Transcription regulator 27.5 1.3E+02 0.0043 24.9 6.3 56 148-208 65-122 (290)
83 8abp_A L-arabinose-binding pro 27.2 85 0.0029 26.0 5.2 52 131-187 42-93 (306)
84 3isa_A Putative enoyl-COA hydr 27.2 1.8E+02 0.0063 24.6 7.4 32 128-159 29-60 (254)
85 3oc7_A Enoyl-COA hydratase; se 27.1 1.5E+02 0.0052 25.2 6.9 32 128-159 33-65 (267)
86 2ej5_A Enoyl-COA hydratase sub 27.0 1.5E+02 0.0051 25.1 6.8 32 127-158 24-56 (257)
87 3kke_A LACI family transcripti 27.0 95 0.0033 26.0 5.5 52 148-204 71-124 (303)
88 3h75_A Periplasmic sugar-bindi 26.8 85 0.0029 26.9 5.2 38 148-189 62-99 (350)
89 1jlj_A Gephyrin; globular alph 26.7 75 0.0026 26.2 4.7 27 132-158 60-88 (189)
90 3gow_A PAAG, probable enoyl-CO 26.6 1.6E+02 0.0055 24.9 6.9 32 128-159 22-54 (254)
91 1h05_A 3-dehydroquinate dehydr 26.4 39 0.0013 27.6 2.7 43 136-180 56-98 (146)
92 3fdu_A Putative enoyl-COA hydr 26.1 1.1E+02 0.0039 26.2 5.9 32 127-158 26-58 (266)
93 3dmy_A Protein FDRA; predicted 26.1 51 0.0017 31.6 3.9 49 134-182 312-370 (480)
94 2khz_A C-MYC-responsive protei 26.0 76 0.0026 25.5 4.5 43 135-182 64-109 (165)
95 3e70_C DPA, signal recognition 25.8 27 0.00092 31.4 1.8 52 133-187 255-306 (328)
96 1f76_A Dihydroorotate dehydrog 25.7 99 0.0034 27.2 5.6 29 127-157 219-247 (336)
97 2yhs_A FTSY, cell division pro 25.5 25 0.00086 34.1 1.6 67 133-202 425-491 (503)
98 3myb_A Enoyl-COA hydratase; ss 25.5 1.7E+02 0.0058 25.4 7.0 31 128-158 48-79 (286)
99 3qk8_A Enoyl-COA hydratase ECH 25.0 1.1E+02 0.0037 26.4 5.6 31 128-158 35-66 (272)
100 3rot_A ABC sugar transporter, 25.0 2.4E+02 0.0082 23.3 7.7 53 131-188 46-98 (297)
101 3sll_A Probable enoyl-COA hydr 24.8 2E+02 0.0068 25.0 7.3 32 128-159 46-78 (290)
102 3kip_A 3-dehydroquinase, type 24.7 53 0.0018 27.4 3.2 43 136-180 70-113 (167)
103 2j5g_A ALR4455 protein; enzyme 24.4 2.2E+02 0.0075 24.4 7.4 32 127-158 45-77 (263)
104 3k9c_A Transcriptional regulat 24.3 87 0.003 26.0 4.7 51 148-204 66-119 (289)
105 3qmj_A Enoyl-COA hydratase, EC 24.2 88 0.003 26.6 4.8 31 128-158 28-59 (256)
106 1yoe_A Hypothetical protein YB 23.6 1.1E+02 0.0037 27.3 5.4 59 129-189 21-83 (322)
107 1szo_A 6-oxocamphor hydrolase; 23.2 2E+02 0.0067 24.6 6.8 32 127-158 37-69 (257)
108 3egc_A Putative ribose operon 23.2 1.2E+02 0.0039 25.1 5.2 51 131-188 49-99 (291)
109 1hzd_A AUH, AU-binding protein 23.2 1.7E+02 0.0057 25.1 6.4 30 128-158 34-65 (272)
110 3moy_A Probable enoyl-COA hydr 22.8 1.4E+02 0.0049 25.5 5.9 31 128-158 32-63 (263)
111 2h0a_A TTHA0807, transcription 22.3 1.4E+02 0.0048 24.2 5.5 55 148-207 55-110 (276)
112 1wz8_A Enoyl-COA hydratase; ly 22.2 2E+02 0.0069 24.4 6.7 40 118-158 23-63 (264)
113 1twd_A Copper homeostasis prot 21.8 2E+02 0.0069 25.3 6.7 45 125-169 62-111 (256)
114 1nzy_A Dehalogenase, 4-chlorob 21.6 2.1E+02 0.0072 24.3 6.8 32 127-158 24-56 (269)
115 3hin_A Putative 3-hydroxybutyr 21.5 1.4E+02 0.0047 25.9 5.6 30 128-158 38-67 (275)
116 4dpp_A DHDPS 2, dihydrodipicol 21.5 3.4E+02 0.012 24.8 8.4 46 136-181 80-133 (360)
117 2fvy_A D-galactose-binding per 21.5 1.3E+02 0.0043 24.9 5.1 52 131-187 44-95 (309)
118 1uiy_A Enoyl-COA hydratase; ly 21.1 2.5E+02 0.0085 23.6 7.0 31 127-158 20-52 (253)
119 3rrv_A Enoyl-COA hydratase/iso 21.0 2.1E+02 0.0072 24.7 6.7 31 128-158 50-81 (276)
120 2hsg_A Glucose-resistance amyl 21.0 1.8E+02 0.0062 24.5 6.2 43 140-187 107-150 (332)
121 4hdt_A 3-hydroxyisobutyryl-COA 20.7 1.5E+02 0.0052 26.7 5.8 31 128-158 31-62 (353)
122 3rsi_A Putative enoyl-COA hydr 20.6 1.4E+02 0.0046 25.6 5.3 32 128-159 31-63 (265)
123 2bdq_A Copper homeostasis prot 20.3 2.4E+02 0.0083 24.3 6.7 81 125-206 65-175 (224)
124 1ef8_A Methylmalonyl COA decar 20.2 1.7E+02 0.0057 24.9 5.7 31 127-157 25-55 (261)
125 1q8f_A Pyrimidine nucleoside h 20.2 1.9E+02 0.0066 25.5 6.3 58 129-189 11-72 (313)
No 1
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=100.00 E-value=1.1e-57 Score=428.57 Aligned_cols=187 Identities=49% Similarity=0.811 Sum_probs=161.6
Q ss_pred CCCCcEEEEecCCcceeeeCCCCceecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEEEEEEecCCC
Q psy12401 46 SLESRVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLL 125 (255)
Q Consensus 46 ~~~~rIlVI~TGGTIa~~~~~~g~l~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~~v~e~~~~~ 125 (255)
|.+|||+||+|||||+|+.++. ++.|....++++++.+|++.+.+ + ..+++.++.+++
T Consensus 21 m~~~~I~vi~TGGTIa~~~~~~-g~~p~~~~~~~ll~~vp~l~~~~----------------~-----~~i~~~~~~~li 78 (358)
T 2him_A 21 MQKKSIYVAYTGGTIGMQRSEQ-GYIPVSGHLQRQLALMPEFHRPE----------------M-----PDFTIHEYTPLM 78 (358)
T ss_dssp --CCEEEEEEEESGGGBCC------CBCTTHHHHHHTTCGGGGSTT----------------S-----CEEEEEEEEEEE
T ss_pred CCCCcEEEEECCcccccccCCC-CcccCCcchHHHHHhCccccccC----------------c-----ceEEEEECCccC
Confidence 5688999999999999976544 47775554557888777653211 1 136778888767
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHHHHHH
Q psy12401 126 DSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLIL 205 (255)
Q Consensus 126 dSs~~t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~ 205 (255)
||++|||++|.+|++.|++.+++||||||||||||||||||||+|++.+++|||||||||||++++++||+.||++|+.+
T Consensus 79 dSs~mt~~~w~~la~~I~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~ 158 (358)
T 2him_A 79 DSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYV 158 (358)
T ss_dssp CGGGCCHHHHHHHHHHHHHHGGGCSEEEEECCSTTHHHHHHHHHHHEETCCSCEEEECCSSCTTSTTCSHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHhcCCeEEEecCchHHHHHHHHHHHHHhcCCCCEEEeCCCCCCcCCCcchHHHHHHHHHH
Confidence 99999999999999999999988999999999999999999999999889999999999999999999999999999999
Q ss_pred HhCCCCCcEEEEeCCeEeccCCeEEccCCCCccCCCCCCCCcEEEeccc
Q psy12401 206 AGNYVIPEVTVYFHNKLMRGNRTIKTSTYEFDAFISPNCLPLVQVGIEI 254 (255)
Q Consensus 206 A~~~~~~GV~V~f~g~l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~~~i 254 (255)
|+++..+||+|||||+||+|+|++|.|+.+++||+||++||||+++.++
T Consensus 159 A~~~~~~GV~V~fn~~i~~a~~v~K~~t~~~daF~S~~~gplg~v~~~v 207 (358)
T 2him_A 159 AANYPINEVTLFFNNRLYRGNRTAKAHADGFDAFASPNLPPLLEAGIHI 207 (358)
T ss_dssp HHHSCCSSEEEEETTEEEEGGGCEECBTTSSSCEECTTSCCSEEESSSE
T ss_pred HhCCCCCCeEEEECCEEeecCcEEEcccCCcccccCCCCCceEEEeceE
Confidence 9988778999999999999999999999999999999999999997553
No 2
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=100.00 E-value=1.7e-56 Score=415.72 Aligned_cols=180 Identities=24% Similarity=0.308 Sum_probs=159.8
Q ss_pred CCcEEEEecCCcceeeeCCCC--ceecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEEEEEEecCCC
Q psy12401 48 ESRVLVIYTGGTIGMIINNDG--VLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLL 125 (255)
Q Consensus 48 ~~rIlVI~TGGTIa~~~~~~g--~l~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~~v~e~~~~~ 125 (255)
||||+||+|||||+|+.++.+ ++.|.....+++++.+|++.+ . ..+++.++.+ +
T Consensus 1 ~~~I~ii~TGGTIa~~~~~~~~~g~~~~~~~~~~ll~~vp~l~~------------------~-----~~i~~~~~~~-i 56 (326)
T 1nns_A 1 LPNITILATGGTIAGGGDSATKSNYTVGKVGVENLVNAVPQLKD------------------I-----ANVKGEQVVN-I 56 (326)
T ss_dssp CCEEEEEEEESGGGCBCSCSSCCCCBSSCSCHHHHHHTCGGGGG------------------T-----CEEEEEEEEE-E
T ss_pred CCEEEEEeCCcccceeeCCCCCcccccCCCChHHHHHhCccccc------------------c-----ceEEEEEecc-C
Confidence 579999999999999865442 456644457888888776542 0 1356777776 9
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHHHHHH
Q psy12401 126 DSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLIL 205 (255)
Q Consensus 126 dSs~~t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~ 205 (255)
||++|||++|.+|++.|+++++++|||||||||||||||||||+|++ +++|||||||||||++++++||+.||++|+.+
T Consensus 57 dS~~mt~~~w~~la~~I~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~ 135 (326)
T 1nns_A 57 GSQDMNDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTV-KCDKPVVMVGAMRPSTSMSADGPFNLYNAVVT 135 (326)
T ss_dssp CGGGCCHHHHHHHHHHHHHHGGGCSEEEEECCSSSHHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHhhcCCcEEEEcCchhHHHHHHHHHHhc-CCCCCEEEeCCCCCCcCCCCchHHHHHHHHHH
Confidence 99999999999999999999988999999999999999999999988 89999999999999999999999999999999
Q ss_pred HhCCC--CCcEEEEeCCeEeccCCeEEccCCCCccCCCCCCCCcEEEec
Q psy12401 206 AGNYV--IPEVTVYFHNKLMRGNRTIKTSTYEFDAFISPNCLPLVQVGI 252 (255)
Q Consensus 206 A~~~~--~~GV~V~f~g~l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~~ 252 (255)
|+++. .+||+|||||+||+|+|++|.|+.+++||+||++||||++..
T Consensus 136 A~~~~~~~~GV~v~fn~~i~~a~~v~K~~t~~~~aF~S~~~gplg~v~~ 184 (326)
T 1nns_A 136 AADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHN 184 (326)
T ss_dssp HHCGGGTTSCSEEEETTEEEETTTEEECCSSCTTCEEETTTCCSEEEET
T ss_pred HcCcccCCCceEEEECCEEeeccceEEcccCCcCcccCCCCCeeEEEeC
Confidence 99864 479999999999999999999999999999999999999964
No 3
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=100.00 E-value=2.3e-56 Score=415.41 Aligned_cols=182 Identities=24% Similarity=0.270 Sum_probs=156.4
Q ss_pred CCCCcEEEEecCCcceeeeCCCC--ceecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEEEEEEecC
Q psy12401 46 SLESRVLVIYTGGTIGMIINNDG--VLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDS 123 (255)
Q Consensus 46 ~~~~rIlVI~TGGTIa~~~~~~g--~l~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~~v~e~~~ 123 (255)
|.||||+||+|||||+|+.++.. ++.|.....+++++.+|++.+ . ..+++.++.+
T Consensus 1 m~m~~I~vi~TGGTIa~~~~~~~~~g~~~~~~~~~~ll~~~p~l~~------------------~-----~~i~~~~~~~ 57 (330)
T 1wsa_A 1 MAKPQVTILATGGTIAGSGESSVKSSYSAGAVTVDKLLAAVPAIND------------------L-----ATIKGEQISS 57 (330)
T ss_dssp --CCEEEEEESSSCSCC---------CCCSSHHHHHHHHHCGGGGG------------------T-----CEEEEEECCC
T ss_pred CCCCEEEEEECCCccccccCCCCCCCccCCCCCHHHHHHhCccccc------------------c-----ceEEEEEecc
Confidence 45789999999999999855442 455544457888988776542 1 1367788887
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHH
Q psy12401 124 LLDSSNMTVDDWINIASDVFDNYE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIA 201 (255)
Q Consensus 124 ~~dSs~~t~~d~~~La~~I~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 201 (255)
+||++|||++|.+|++.|+++++ +||||||||||||||||||||+|++ +++|||||||||||++++++||+.||++
T Consensus 58 -idS~~mt~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 135 (330)
T 1wsa_A 58 -IGSQEMTGKVWLKLAKRVNELLAQKETEAVIITHGTDTMEETAFFLNLTV-KSQKPVVLVGAMRPGSSMSADGPMNLYN 135 (330)
T ss_dssp -CCGGGCCHHHHHHHHHHHHHHHHSTTCCCEEEECCSSSHHHHHHHHHHHC-CCSSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred -CCCccCCHHHHHHHHHHHHHHhccCCCCEEEEEcCcchHHHHHHHHHHHc-CCCCCEEEeCCCCCCCCCCCchHHHHHH
Confidence 99999999999999999999995 5999999999999999999999988 5999999999999999999999999999
Q ss_pred HHHHHhCCC--CCcEEEEeCCeEeccCCeEEccCCCCccCCCCCCCCcEEEec
Q psy12401 202 SLILAGNYV--IPEVTVYFHNKLMRGNRTIKTSTYEFDAFISPNCLPLVQVGI 252 (255)
Q Consensus 202 Av~~A~~~~--~~GV~V~f~g~l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~~ 252 (255)
|+.+|+++. .+||+|||||+||+|+|++|.|+.+++||+||++||||++..
T Consensus 136 Av~~A~~~~~~~~GV~V~fn~~i~~a~~v~K~~t~~~~aF~S~~~gplg~v~~ 188 (330)
T 1wsa_A 136 AVNVAINKASTNKGVVIVMNDEIHAAREATKLNTTAVNAFASPNTGKIGTVYY 188 (330)
T ss_dssp HHHHHTCGGGTTSCSEEEETTEEEETTTCEECCSSCTTCEECTTSCCSEEEET
T ss_pred HHHHHhCcccCCCeEEEEECCEEeeccceEECCcCCcCcccCCCCCeeEEEEC
Confidence 999999864 469999999999999999999999999999999999999964
No 4
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=100.00 E-value=3.2e-56 Score=414.69 Aligned_cols=182 Identities=22% Similarity=0.268 Sum_probs=157.3
Q ss_pred CCCCcEEEEecCCcceeeeCCC--CceecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEEEEEEecC
Q psy12401 46 SLESRVLVIYTGGTIGMIINND--GVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDS 123 (255)
Q Consensus 46 ~~~~rIlVI~TGGTIa~~~~~~--g~l~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~~v~e~~~ 123 (255)
+.||||+||+|||||+|+.++. +++.|.....+++++.+|++.+ + ..+++.++.+
T Consensus 3 ~~m~~I~vi~TGGTIa~~~~~~~~~g~~~~~~~~~~ll~~vp~l~~------------------~-----~~i~~~~~~~ 59 (332)
T 2wlt_A 3 QNLPTIALLATGGTIAGSGVDASLGSYKSGELGVKELLKAIPSLNK------------------I-----ARIQGEQVSN 59 (332)
T ss_dssp --CCEEEEEEEESGGGCBC--CTTSCCBTTCSCTTHHHHTCCSGGG------------------T-----CEEEEEEEEE
T ss_pred CCCCEEEEEECCcccccccCCCCCCCccCCCCCHHHHHHhCccccc------------------c-----ceEEEEEecc
Confidence 3478999999999999985543 3455534447888888876542 1 1356778887
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHH
Q psy12401 124 LLDSSNMTVDDWINIASDVFDNYE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIA 201 (255)
Q Consensus 124 ~~dSs~~t~~d~~~La~~I~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 201 (255)
+||++|||++|.+|++.|+++++ +||||||||||||||||||||+|++ +++|||||||||||++++++||+.||++
T Consensus 60 -idS~~mt~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 137 (332)
T 2wlt_A 60 -IGSQDMNEEIWFKLAQRAQELLDDSRIQGVVITHGTDTLEESAYFLNLVL-HSTKPVVLVGAMRNASSLSADGALNLYE 137 (332)
T ss_dssp -ECGGGCCHHHHHHHHHHHHHHHTSTTCCEEEEECCSSSHHHHHHHHHHHC-CCSSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred -CCcccCCHHHHHHHHHHHHHHhccCCCCEEEEecCchhHHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCcchHHHHHH
Confidence 99999999999999999999995 5999999999999999999999988 5999999999999999999999999999
Q ss_pred HHHHHhCCC--CCcEEEEeCCeEeccCCeEEccCCCCccCCCCCCCCcEEEec
Q psy12401 202 SLILAGNYV--IPEVTVYFHNKLMRGNRTIKTSTYEFDAFISPNCLPLVQVGI 252 (255)
Q Consensus 202 Av~~A~~~~--~~GV~V~f~g~l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~~ 252 (255)
|+.+|+++. .+||+|||||+||+|+|++|.|+.+++||+||++||||+|..
T Consensus 138 Av~~A~~~~~~~~GV~V~fn~~i~~a~~v~K~~t~~~~aF~S~~~gplg~v~~ 190 (332)
T 2wlt_A 138 AVSVAVNEKSANKGVLVVMDDTIFSVREVVKTHTTHVSTFKALNSGAIGSVYY 190 (332)
T ss_dssp HHHHHHCGGGTTSCSEEEETTEEEETTTC-CCSSSCTTCCCCTTTCCSEEEET
T ss_pred HHHHHhCcccCCCeEEEEECCEEeeccceEEccCCCcccccCCCCCeeEEEEC
Confidence 999999864 469999999999999999999999999999999999999964
No 5
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=100.00 E-value=8e-56 Score=411.29 Aligned_cols=181 Identities=22% Similarity=0.221 Sum_probs=159.1
Q ss_pred CCCcEEEEecCCcceeeeCCCC---ceecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEEEEEEecC
Q psy12401 47 LESRVLVIYTGGTIGMIINNDG---VLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDS 123 (255)
Q Consensus 47 ~~~rIlVI~TGGTIa~~~~~~g---~l~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~~v~e~~~ 123 (255)
.||||+||+|||||+|+.++.+ ++.+.....+++++.+|++.+ . ..+++.++.+
T Consensus 3 ~m~~I~ii~TGGTIa~~~~~~~~~~g~~~~~~~~~~ll~~~p~l~~------------------~-----~~i~~~~~~~ 59 (327)
T 1o7j_A 3 KLPNIVILATGGTIAGSAATGTQTTGYKAGALGVDTLINAVPEVKK------------------L-----ANVKGEQFSN 59 (327)
T ss_dssp CCCEEEEEEEESGGGCCCSSTTCCSSCCSSCSCHHHHHHHCGGGGG------------------T-----CEEEEEEEEE
T ss_pred CCCEEEEEECCcccccccCCCCCcccccCCCCCHHHHHHhCccccc------------------c-----ceEEEEEecc
Confidence 3789999999999999865442 454223347889988876542 1 1367788887
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHH
Q psy12401 124 LLDSSNMTVDDWINIASDVFDNYE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIA 201 (255)
Q Consensus 124 ~~dSs~~t~~d~~~La~~I~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 201 (255)
+||++|||++|.+|++.|+++++ +||||||||||||||||||||+|++ +++|||||||||||++++++||+.||++
T Consensus 60 -idS~~mt~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 137 (327)
T 1o7j_A 60 -MASENMTGDVVLKLSQRVNELLARDDVDGVVITHGTDTVEESAYFLHLTV-KSDKPVVFVAAMRPATAISADGPMNLLE 137 (327)
T ss_dssp -ECGGGCCHHHHHHHHHHHHHHHTSTTCCEEEEECCSTTHHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred -CCcccCCHHHHHHHHHHHHHHhccCCCCEEEEecCchhHHHHHHHHHHHh-CCCCCEEEeCCCCCCCCCCCchHHHHHH
Confidence 99999999999999999999996 5999999999999999999999988 5999999999999999999999999999
Q ss_pred HHHHHhCCC--CCcEEEEeCCeEeccCCeEEccCCCCccCCCCCCCCcEEEec
Q psy12401 202 SLILAGNYV--IPEVTVYFHNKLMRGNRTIKTSTYEFDAFISPNCLPLVQVGI 252 (255)
Q Consensus 202 Av~~A~~~~--~~GV~V~f~g~l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~~ 252 (255)
|+.+|+++. .+||+|||||+||+|+|++|.|+.+++||+||++||||++..
T Consensus 138 Av~~A~~~~~~~~GV~V~fn~~i~~a~~v~K~~t~~~~aF~S~~~gplg~v~~ 190 (327)
T 1o7j_A 138 AVRVAGDKQSRGRGVMVVINDRIGSARYITKTNASTLDTFRANEEGYLGVIIG 190 (327)
T ss_dssp HHHHHHCGGGTTSCCEEEETTEEEETTTCEECBSSCTTCEECTTTCCSEEEET
T ss_pred HHHHHhCcCCCCCceEEEECCEEeecCceEEccCCCcccccCCCCCeeEEEEC
Confidence 999999874 479999999999999999999999999999999999999964
No 6
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=100.00 E-value=6.9e-56 Score=411.99 Aligned_cols=174 Identities=27% Similarity=0.406 Sum_probs=157.8
Q ss_pred cEEEEecCCcceeeeCCCCceecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEEEEEEecCCCCCCC
Q psy12401 50 RVLVIYTGGTIGMIINNDGVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSLLDSSN 129 (255)
Q Consensus 50 rIlVI~TGGTIa~~~~~~g~l~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~~v~e~~~~~dSs~ 129 (255)
||+||+|||||+|+.++. ++.|.. ..+++++ +|++.+. . .+++.++.+ +||++
T Consensus 2 ~I~vi~TGGTIa~~~~~~-g~~~~~-~~~~ll~-vp~l~~~---------------~--------~i~~~~~~~-idS~~ 54 (328)
T 1wls_A 2 RILILGMGGTIASVKGER-GYESAL-SVSKILK-LAGISSE---------------A--------KIEARDLMN-VDSTL 54 (328)
T ss_dssp BEEEEEEECGGGEECCTT-SBEECC-CHHHHHH-TTTTTSC---------------S--------BCCEEEEEE-ECGGG
T ss_pred eEEEEecCcccccccCCC-CCcCCC-CHHHHHh-CccccCC---------------c--------eEEEEEecC-CCCCC
Confidence 599999999999986654 466743 4788999 9877631 1 245667777 99999
Q ss_pred CCHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHHHHHHHhCC
Q psy12401 130 MTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNY 209 (255)
Q Consensus 130 ~t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A~~~ 209 (255)
|||++|.+|++.|++++++||||||||||||||||||||+|++++++|||||||||||++++++||+.||++|+.+|+++
T Consensus 55 mt~~~w~~la~~I~~~~~~~dG~VItHGTDTmeeTA~~Ls~ll~~~~kPVVlTGAqrP~~~~~sDg~~NL~~Av~~A~~~ 134 (328)
T 1wls_A 55 IQPSDWERLAKEIEKEVWEYDGIVITHGTDTMAYSASMLSFMLRNPPIPIVLTGSMLPITEKNSDAPFNLRTALEFVKLG 134 (328)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSEEEEECCGGGHHHHHHHHHHHEESCSSEEEEECCSSCTTSSSCSHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHHhccCCeEEEEcCCchHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHhCC
Confidence 99999999999999999889999999999999999999999889999999999999999999999999999999999997
Q ss_pred CCCcEEEEeCCeEeccCCeEEccCCCCccCCCCCCCCcEEEe
Q psy12401 210 VIPEVTVYFHNKLMRGNRTIKTSTYEFDAFISPNCLPLVQVG 251 (255)
Q Consensus 210 ~~~GV~V~f~g~l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~ 251 (255)
.. ||+|||||+||+|+|++|.|+.+++||+||++||||+++
T Consensus 135 ~~-GV~V~fn~~i~~a~~v~K~~t~~~daF~S~~~gplg~~~ 175 (328)
T 1wls_A 135 IR-GIYIAFNGKVMLGVRASKIRSMGFDAFESINYPNVAEIK 175 (328)
T ss_dssp CC-EEEEEETTEEEEGGGEEECBSSSSCCEEECSSCCSEEEE
T ss_pred CC-CeEEEECCEEeecccEEEccCCCcccccCCCCCeeEEee
Confidence 66 999999999999999999999999999999999999997
No 7
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.8e-55 Score=409.01 Aligned_cols=186 Identities=28% Similarity=0.362 Sum_probs=158.7
Q ss_pred ccCccCCCCcEEEEecCCcceeeeCCCC---ce-ecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEE
Q psy12401 41 KNQTESLESRVLVIYTGGTIGMIINNDG---VL-APQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLY 116 (255)
Q Consensus 41 ~~~~~~~~~rIlVI~TGGTIa~~~~~~g---~l-~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~ 116 (255)
+|+++..+|||+||+|||||+|+.++.+ ++ +| ....+++|+.+|++.+ + ..+
T Consensus 1 ~~~~~~~~~~I~ii~TGGTIa~~~~~~~~~~gy~~~-~~~~~~ll~~vp~l~~------------------~-----~~i 56 (334)
T 3nxk_A 1 SNAMKKAKSRIAILGTGGTIAGFIDSTIATTGYAAG-AIDIDVLIKAVPQIRD------------------L-----ADI 56 (334)
T ss_dssp -------CCEEEEEEEECGGGCBCSCSSCCSSCBSS-CSCHHHHTTTCTTHHH------------------H-----SEE
T ss_pred CCccccCCCEEEEEECCchhcccccCCcCccCccCC-CCCHHHHHHhCccccc------------------c-----ceE
Confidence 4667778899999999999999854321 34 44 3457899988876542 1 135
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHhh-cCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChH
Q psy12401 117 KVLEYDSLLDSSNMTVDDWINIASDVFDNY-ENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDG 195 (255)
Q Consensus 117 ~v~e~~~~~dSs~~t~~d~~~La~~I~~~~-~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg 195 (255)
++.++.+ +||++|+|++|.+|++.|++.+ ++||||||||||||||||||||+|++ +++|||||||||||++++++||
T Consensus 57 ~~~~~~~-idS~~m~~~~~~~la~~i~~~~~~~~dGvVItHGTDTm~~TA~~L~~~l-~~~kPVVlTGa~rp~~~~~sDg 134 (334)
T 3nxk_A 57 SWEQIAN-IDSSNMCDEIWLRLAKKIAKLFAEGIDGVVITHGTDTMEETAYFLNLTI-KSDKPVVLVGAMRPSTAISADG 134 (334)
T ss_dssp EEEEEEE-ECGGGCCHHHHHHHHHHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSH
T ss_pred EEEEecc-cCcccCCHHHHHHHHHHHHHHhhcCCCeEEEECCCchHHHHHHHHHHHc-CCCCCEEEECCCCCCCCCCchH
Confidence 6677776 9999999999999999999998 67999999999999999999999988 9999999999999999999999
Q ss_pred HHHHHHHHHHHhCCC--CCcEEEEeCCeEeccCCeEEccCCCCccCCCCCCCCcEEEec
Q psy12401 196 VDNFIASLILAGNYV--IPEVTVYFHNKLMRGNRTIKTSTYEFDAFISPNCLPLVQVGI 252 (255)
Q Consensus 196 ~~NL~~Av~~A~~~~--~~GV~V~f~g~l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~~ 252 (255)
+.||.+|+.+|+++. .+||+|||||+||+|++++|.|+.+++||+|||+||||+|..
T Consensus 135 ~~NL~~Av~~A~~~~a~~~GV~v~f~~~i~~a~~v~K~~t~~~daF~S~n~gplg~v~~ 193 (334)
T 3nxk_A 135 PKNLYNAVALVVNKEAKNKGVMVAINDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVD 193 (334)
T ss_dssp HHHHHHHHHHHHSGGGTTSCSEEEETTEEEETTTCEECBSSCSSCEECTTTCCSEEEET
T ss_pred HHHHHHHHHHHhCcccCCCeEEEEECCEEEecCcEEECccCCcccccCCCCCceeEEEc
Confidence 999999999999874 479999999999999999999999999999999999999964
No 8
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=100.00 E-value=6.5e-55 Score=405.79 Aligned_cols=179 Identities=22% Similarity=0.268 Sum_probs=157.6
Q ss_pred CCcEEEEecCCcceeeeCCCC---ceecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEEEEEEecCC
Q psy12401 48 ESRVLVIYTGGTIGMIINNDG---VLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDSL 124 (255)
Q Consensus 48 ~~rIlVI~TGGTIa~~~~~~g---~l~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~~v~e~~~~ 124 (255)
||||+||+|||||+|+.++.+ ++.+.....+++++.+|++.+ ...+++.++.+
T Consensus 1 m~~I~ii~TGGTIa~~~~~~~~~~g~~~~~~~~~~ll~~~p~l~~-----------------------~~~i~~~~~~~- 56 (331)
T 1agx_A 1 KNNVVIVATGGTIAGAGASSTNSATYSAAKVPVDALIKAVPQVND-----------------------LANITGIQALQ- 56 (331)
T ss_dssp CCEEEEEECBTTTSCCCSCSSCTTCCCCSCCCHHHHHTTSTTHHH-----------------------HSEEEEECCCC-
T ss_pred CCEEEEEECCcccceeeCCCCCcccccCCCCCHHHHHHhCccccc-----------------------cceEEEEEecc-
Confidence 589999999999999865442 454223347888888776542 01367788887
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHHH
Q psy12401 125 LDSSNMTVDDWINIASDVFDNYE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIAS 202 (255)
Q Consensus 125 ~dSs~~t~~d~~~La~~I~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 202 (255)
+||++|||++|.+|++.|+++++ +||||||||||||||||||||+|++ +++|||||||||||++++++||+.||++|
T Consensus 57 idS~~mt~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 135 (331)
T 1agx_A 57 VASESITDKELLSLARQVNDLVKKPSVNGVVITHGTDTMEETAFFLNLVV-HTDKPIVLVGSMRPSTALSADGPLNLYSA 135 (331)
T ss_dssp BCGGGCCHHHHHHHHHHHHHHHTSTTCCEEEEECCGGGHHHHHHHHHHHC-CCSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHhccCCCCEEEEecCcchHHHHHHHHHHHc-CCCCCEEEeCCCCCCCCCCchhHHHHHHH
Confidence 99999999999999999999996 5999999999999999999999988 59999999999999999999999999999
Q ss_pred HHHHhCCCC--CcEEEEeCCeEeccCCeEEccCCCCccCCCCCCCCcEEEec
Q psy12401 203 LILAGNYVI--PEVTVYFHNKLMRGNRTIKTSTYEFDAFISPNCLPLVQVGI 252 (255)
Q Consensus 203 v~~A~~~~~--~GV~V~f~g~l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~~ 252 (255)
+.+|+++.. +||+|||||+||+|+|++|.|+.+++||+| |+||||+|..
T Consensus 136 v~~A~~~~~~~~GV~V~fn~~i~~a~~v~K~~t~~~~aF~S-~~gplg~v~~ 186 (331)
T 1agx_A 136 VALASSNEAKNKGVMVLMNDSIFAARDVTKGINIHTHAFVS-QWGALGTLVE 186 (331)
T ss_dssp HHHHTCTTCTTSCEEEEETTEEEETTTCEECCSSSTTCEEC-SSCCSEEEET
T ss_pred HHHHhCcCCCCCeEEEEECCEEeecCceEEccCCCcccccc-CCceeEEEeC
Confidence 999998753 699999999999999999999999999999 9999999864
No 9
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=100.00 E-value=2e-54 Score=415.42 Aligned_cols=182 Identities=36% Similarity=0.452 Sum_probs=163.6
Q ss_pred cCCCCcEEEEecCCcceeeeCCC-CceecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEEEEEEecC
Q psy12401 45 ESLESRVLVIYTGGTIGMIINND-GVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDS 123 (255)
Q Consensus 45 ~~~~~rIlVI~TGGTIa~~~~~~-g~l~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~~v~e~~~ 123 (255)
...||||+||+|||||+|+.++. +++.|... ++++++.+|++.+ ...+++.++.+
T Consensus 88 ~~~m~kI~vi~TGGTIa~~~~~~~~g~~p~~~-~~~ll~~vP~l~~-----------------------~a~i~~~~~~~ 143 (438)
T 1zq1_A 88 KPGLPEVTIIGTGGTIASRIDYETGAVYPAFT-AEELAKALPEIFE-----------------------VANVKPKLLFN 143 (438)
T ss_dssp CTTCCEEEEEECSCCCCEEEETTTTEEEECCC-HHHHHHHCGGGGG-----------------------TSEEEEEECCC
T ss_pred CCCCCEEEEEECCccccccCCCCCCcccCCCC-HHHHHHhCccccc-----------------------CceEEEEEecc
Confidence 35578999999999999986542 67888544 7888888776542 11367888988
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhc-CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHHH
Q psy12401 124 LLDSSNMTVDDWINIASDVFDNYE-NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIAS 202 (255)
Q Consensus 124 ~~dSs~~t~~d~~~La~~I~~~~~-~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 202 (255)
+||++|||++|.+|++.|+++++ +||||||||||||||||||||+|++.+++|||||||||||++++++||+.||++|
T Consensus 144 -idSs~mtp~~w~~La~~I~~~~~~~~DG~VItHGTDTMeeTA~~Lsl~l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 222 (438)
T 1zq1_A 144 -IFSEDMKPKHWVKIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICS 222 (438)
T ss_dssp -CCGGGCCHHHHHHHHHHHHHHHHTTCSEEEEECCSSSHHHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred -CCcccCCHHHHHHHHHHHHHHhccCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEeCCCCCCCCCCcchHHHHHHH
Confidence 99999999999999999999997 7999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHhCCCCCcEEEEeCCe-------EeccCCeEEccCCCCccCCCCCCCCcEEEec
Q psy12401 203 LILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQVGI 252 (255)
Q Consensus 203 v~~A~~~~~~GV~V~f~g~-------l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~~ 252 (255)
+.+|+++. .||+|||||+ ||+|+|++|.|+.+++||+||++||||++..
T Consensus 223 v~~A~~~~-~GV~Vvfn~~~~d~~~~I~~a~~v~K~~t~~~dAF~S~~~gpLg~v~~ 278 (438)
T 1zq1_A 223 VRMATSEV-AEVMVVMHGETGDTYCLAHRGTKVRKMHTSRRDAFRSINDVPIAKIWP 278 (438)
T ss_dssp HHHHTSSB-CSEEEEEESSSSSSCEEEEETTSEEECBSSCSTTEEECSSCCSEEECT
T ss_pred HHHHcCCC-CCeEEEECCccCCCceEEEEcccEEEccCCCcccccCCCCceeEEecc
Confidence 99998864 4999999999 9999999999999999999999999999965
No 10
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=100.00 E-value=2.1e-54 Score=403.51 Aligned_cols=181 Identities=25% Similarity=0.270 Sum_probs=158.7
Q ss_pred CCCCcEEEEecCCcceeeeCCCC---ceecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEEEEEEec
Q psy12401 46 SLESRVLVIYTGGTIGMIINNDG---VLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYD 122 (255)
Q Consensus 46 ~~~~rIlVI~TGGTIa~~~~~~g---~l~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~~v~e~~ 122 (255)
+.+|||+||+|||||+|+.++.+ ++.+.....+++|+.+|++.+ + ..+++.++.
T Consensus 7 ~~~~~I~ii~TGGTIa~~~~~~~~~~gy~~~~~~~~~ll~~vp~l~~------------------~-----~~i~~~~~~ 63 (337)
T 4pga_A 7 QKLANVVILATGGTIAGAGASAANSATYQAAKVGVDKLIAGVPELAD------------------L-----ANVRGEQVM 63 (337)
T ss_dssp -CCCEEEEEEEESGGGCEESSTTCSSSEESSCSCHHHHHHTCTTHHH------------------H-----CEEEEEEEE
T ss_pred CCCCeEEEEECCChhcccccCCCCcccccCCCccHHHHHHhCccccc------------------c-----ceEEEEEec
Confidence 56899999999999999865432 454334568999998886542 1 125666777
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhh--cCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHH
Q psy12401 123 SLLDSSNMTVDDWINIASDVFDNY--ENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFI 200 (255)
Q Consensus 123 ~~~dSs~~t~~d~~~La~~I~~~~--~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~ 200 (255)
+ +||++|||++|.+|++.|++.+ ++||||||||||||||||||||+|++ +++|||||||||||++++++||+.||.
T Consensus 64 ~-idS~~mt~~~w~~la~~i~~~l~~~~~dGvVItHGTDTm~~TA~~L~~~l-~~~kPVVlTGa~rp~~~~~sDg~~NL~ 141 (337)
T 4pga_A 64 Q-IASESITNDDLLKLGKRVAELADSNDVDGIVITHGTDTLEETAYFLNLVQ-KTDKPIVVVGSMRPGTAMSADGMLNLY 141 (337)
T ss_dssp E-ECGGGCCHHHHHHHHHHHHHHHHCTTCSEEEEECCSTTHHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHH
T ss_pred c-CCCCcCCHHHHHHHHHHHHHHhhccCCCeEEEECCCccHHHHHHHHHHHc-CCCCCEEEeCCCCCCCCCCchhHHHHH
Confidence 5 9999999999999999999964 56999999999999999999999988 999999999999999999999999999
Q ss_pred HHHHHHhCCC--CCcEEEEeCCeEeccCCeEEccCCCCccCCCCCCCCcEEEec
Q psy12401 201 ASLILAGNYV--IPEVTVYFHNKLMRGNRTIKTSTYEFDAFISPNCLPLVQVGI 252 (255)
Q Consensus 201 ~Av~~A~~~~--~~GV~V~f~g~l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~~ 252 (255)
+|+.+|+++. .+||+|||||+||+|+|++|.|+.+++||+|| +||||++..
T Consensus 142 ~Av~~A~~~~a~~~GV~V~fn~~i~~a~~v~K~~t~~~daF~S~-~gplg~v~~ 194 (337)
T 4pga_A 142 NAVAVASNKDSRGKGVLVTMNDEIQSGRDVSKSINIKTEAFKSA-WGPLGMVVE 194 (337)
T ss_dssp HHHHHHTCGGGTTSCSEECCTTEEEETTTCEECBSSSTTCEECT-TCCSEEEET
T ss_pred HHHHHHcccccCCCEEEEEECCEEEeeCcEEEccCCCcccccCC-CCceeEEEc
Confidence 9999999874 57999999999999999999999999999999 999999975
No 11
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=100.00 E-value=2.2e-54 Score=414.92 Aligned_cols=181 Identities=36% Similarity=0.477 Sum_probs=161.9
Q ss_pred cCCCCcEEEEecCCcceeeeCCC-CceecCcchHHHHHhcCCCCCccccccCCCCccccccccccccCceeEEEEEEecC
Q psy12401 45 ESLESRVLVIYTGGTIGMIINND-GVLAPQSNKFKENIRQNPLMHDVDYLRNRPDKSEYLALPGLKHNKRVLYKVLEYDS 123 (255)
Q Consensus 45 ~~~~~rIlVI~TGGTIa~~~~~~-g~l~p~~~~~~~~L~~~p~l~~~~~~~~~~~~~~~~~lp~l~~~~~v~~~v~e~~~ 123 (255)
...||||+||+|||||+|+.++. +++.|... ++++++.+|++.+. ..+++.++.+
T Consensus 87 ~~~m~kI~vi~TGGTIa~~~~~~~~g~~p~~~-~~~ll~~vP~l~~~-----------------------a~i~~~~~~~ 142 (435)
T 2d6f_A 87 DPELPDVSIISTGGTVASIIDYRTGAVHPAFT-ADDLLRANPELLDI-----------------------ANIRGRAVFN 142 (435)
T ss_dssp CSSSCEEEEEESSCCCCCEECTTTSCEECCCC-TTHHHHHCGGGGGT-----------------------CEEECCCCCC
T ss_pred CCCCCEEEEEECCcccceeECCCCCccccCCC-HHHHHHhCcccccC-----------------------ceEEEEEccC
Confidence 35578999999999999986542 56888543 67888887765421 1356778887
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhc-CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHHH
Q psy12401 124 LLDSSNMTVDDWINIASDVFDNYE-NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIAS 202 (255)
Q Consensus 124 ~~dSs~~t~~d~~~La~~I~~~~~-~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 202 (255)
+||++|||++|.+|++.|+++++ +||||||||||||||||||||+|++ +++|||||||||||++++++||+.||++|
T Consensus 143 -idSs~mtp~~w~~La~~I~~~~~~~~DG~VItHGTDTMeeTA~~Lsl~l-~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 220 (435)
T 2d6f_A 143 -ILSENMKPEYWVETARAVYGEIKDGADGVVVAHGTDTMHYTSAALSFML-RTPVPVVFTGAQRSSDRPSSDASLNIQCS 220 (435)
T ss_dssp -CCGGGCCHHHHHHHHHHHHHHHHTTCSEEEEECCTTTHHHHHHHHHHHE-ECSSCEEEECCSSCTTSTTCTHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHHHHHhccCCCeEEEEcCcchHHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCcchHHHHHHH
Confidence 99999999999999999999997 7999999999999999999999998 99999999999999999999999999999
Q ss_pred HHHHhCCCCCcEEEEeCCe-------EeccCCeEEccCCCCccCCCCCCCCcEEEec
Q psy12401 203 LILAGNYVIPEVTVYFHNK-------LMRGNRTIKTSTYEFDAFISPNCLPLVQVGI 252 (255)
Q Consensus 203 v~~A~~~~~~GV~V~f~g~-------l~~a~~v~K~~t~~~~aF~Sp~~gpLg~v~~ 252 (255)
+.+|+++.. ||+|||||+ ||+|+|++|.|+.+++||+||++||||+++.
T Consensus 221 v~~A~~~~~-GV~Vvfn~~~~d~~~~I~~a~~v~K~~t~~~dAF~S~~~gpLg~v~~ 276 (435)
T 2d6f_A 221 VRAATSEIA-EVTVCMHATMDDLSCHLHRGVKVRKMHTSRRDTFRSMNALPLAEVTP 276 (435)
T ss_dssp HHHHHSSCC-SEEEEEESSSSSSCEEEEEGGGEEECBSSCTTCEEESSSCCSEEEET
T ss_pred HHHHcCCCC-CeEEEECCccCCCceEEEEcccEEEcccCCcccccCCCCceeEEecC
Confidence 999998654 999999999 9999999999999999999999999999975
No 12
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=68.42 E-value=25 Score=33.11 Aligned_cols=19 Identities=16% Similarity=0.335 Sum_probs=15.7
Q ss_pred cCCCCcEEEEecCCcceee
Q psy12401 45 ESLESRVLVIYTGGTIGMI 63 (255)
Q Consensus 45 ~~~~~rIlVI~TGGTIa~~ 63 (255)
...-+||.||+.||..++.
T Consensus 290 ~~~g~rvaiitngGG~~~l 308 (457)
T 2csu_A 290 LPRGNKVAIMTNAGGPGVL 308 (457)
T ss_dssp CCSSSEEEEEESCHHHHHH
T ss_pred CCCCCcEEEEECCHHHHHH
Confidence 3446789999999999886
No 13
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=62.77 E-value=4.5 Score=38.94 Aligned_cols=36 Identities=28% Similarity=0.342 Sum_probs=29.6
Q ss_pred CCeEEEEcC-CchHHHHHHHHHhhhcC----CCceEEEcCC
Q psy12401 149 FDGFVILHG-TDTLCYTAAALSFMFEN----LGKTVIITGS 184 (255)
Q Consensus 149 ~dG~VVtHG-TDTLeeTA~~Lsl~l~~----~~kPVVlTGA 184 (255)
.|+||++=| ..||+|...+|.+...+ .+|||||.|.
T Consensus 246 SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~ 286 (460)
T 3bq9_A 246 AHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTGP 286 (460)
T ss_dssp CSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEEC
T ss_pred CCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEec
Confidence 689999875 89999999999975322 5899999985
No 14
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=53.44 E-value=44 Score=29.08 Aligned_cols=47 Identities=19% Similarity=0.269 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHHHHHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 130 MTVDDWINIASDVFDNYE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 130 ~t~~d~~~La~~I~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
.+.+...+....+-+.+. ++|.|||.+-|+|- ++|+.+-...+.|||
T Consensus 49 ~s~~~i~~~~~~~~~~L~~~g~d~IViACNTas~----~~l~~lr~~~~iPVi 97 (276)
T 2dwu_A 49 RSVEEVQSFVFEMVEFLKQFPLKALVVACNTAAA----ATLAALQEALSIPVI 97 (276)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHHH----HHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCcHHH----HHHHHHHHHCCCCEE
Confidence 445555555444444443 48999999999883 235543344578988
No 15
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=53.38 E-value=33 Score=30.05 Aligned_cols=48 Identities=13% Similarity=0.043 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHHHh-hc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEE
Q psy12401 130 MTVDDWINIASDVFDN-YE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVII 181 (255)
Q Consensus 130 ~t~~d~~~La~~I~~~-~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVl 181 (255)
.+.++..+....+-+. ++ ++|.|||.+.|++- ++++.+-...+.|||=
T Consensus 63 ~s~~~i~~~~~~i~~~ll~~~g~d~IviaCNTas~----~~l~~lr~~~~iPVig 113 (285)
T 2jfn_A 63 KSEAFIVERVVAIVTAVQERYPLALAVVACNTAST----VSLPALREKFDFPVVG 113 (285)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHH----HHHHHHHHHCSSCEEC
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCEEEEECccccH----HHHHHHHHhCCCCEEe
Confidence 4566666655555443 33 58999999999883 2445433446788774
No 16
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=51.19 E-value=12 Score=32.17 Aligned_cols=51 Identities=20% Similarity=0.214 Sum_probs=37.1
Q ss_pred CCCeEEEEc-CCchHHHHHHHHHhh-hcCCCceEEEcCCCCCCCCCCChHHHHHHHHH
Q psy12401 148 NFDGFVILH-GTDTLCYTAAALSFM-FENLGKTVIITGSQISIFQPRSDGVDNFIASL 203 (255)
Q Consensus 148 ~~dG~VVtH-GTDTLeeTA~~Lsl~-l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 203 (255)
..|+|||+- |..||+|..-.|.+. +....|||||.+.. ...|+..++.+.+
T Consensus 109 ~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~-----g~w~~l~~~l~~~ 161 (215)
T 2a33_A 109 HSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDKA 161 (215)
T ss_dssp TCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGG-----GTTHHHHHHHHHH
T ss_pred hCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCc-----chhHHHHHHHHHH
Confidence 378999987 578999999888874 23458999997753 2567777765544
No 17
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=50.19 E-value=54 Score=28.23 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCc
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGTD 159 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGTD 159 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|..
T Consensus 31 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g 63 (265)
T 3kqf_A 31 NSLSLALLEELQNILTQINEEANTRVVILTGAG 63 (265)
T ss_dssp TCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 568999999999999887654 23455555554
No 18
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=49.98 E-value=46 Score=28.74 Aligned_cols=48 Identities=19% Similarity=0.176 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHHHHHhh-c-CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEE
Q psy12401 130 MTVDDWINIASDVFDNY-E-NFDGFVILHGTDTLCYTAAALSFMFENLGKTVII 181 (255)
Q Consensus 130 ~t~~d~~~La~~I~~~~-~-~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVl 181 (255)
-+.+...+....+-+.+ + ++|.|||.+.|++- ++++.+-...+.|||=
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~----~~l~~lr~~~~iPvig 94 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNTATA----VVLEEMQKQLPIPVVG 94 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHH----HHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhH----HHHHHHHHhCCCCEEe
Confidence 34454444433333333 2 48999999999873 2344433445788774
No 19
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=49.13 E-value=12 Score=36.00 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=29.4
Q ss_pred CCeEEEEc-CCchHHHHHHHHHhhh-c---CCCceEEEcCC
Q psy12401 149 FDGFVILH-GTDTLCYTAAALSFMF-E---NLGKTVIITGS 184 (255)
Q Consensus 149 ~dG~VVtH-GTDTLeeTA~~Lsl~l-~---~~~kPVVlTGA 184 (255)
.|+||++= |..||+|...+|.+.. . ..+|||||.|.
T Consensus 248 SDAfIaLPGG~GTLEELfE~LTw~qLgtgk~h~kPIVLln~ 288 (462)
T 3gh1_A 248 AHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPIVLTGP 288 (462)
T ss_dssp CSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEEC
T ss_pred CCEEEEcCCCcchHHHHHHHHHHHhcccCcCCCCCEEEEcC
Confidence 68999986 5799999999999853 2 34699999984
No 20
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=48.63 E-value=83 Score=27.16 Aligned_cols=48 Identities=15% Similarity=0.023 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHHHhh-c-CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEE
Q psy12401 130 MTVDDWINIASDVFDNY-E-NFDGFVILHGTDTLCYTAAALSFMFENLGKTVII 181 (255)
Q Consensus 130 ~t~~d~~~La~~I~~~~-~-~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVl 181 (255)
-+.++..+....+-+.+ + ++|.|||.+.|++- ++++.+-...+.|||=
T Consensus 54 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~----~~l~~lr~~~~iPvig 103 (273)
T 2oho_A 54 RPKKQIKEYTWELVNFLLTQNVKMIVFACNTATA----VAWEEVKAALDIPVLG 103 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHH----HHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchHhH----HHHHHHHHhCCCCEEe
Confidence 33444444433333333 2 48999999999873 2244333345788774
No 21
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=47.65 E-value=12 Score=32.17 Aligned_cols=35 Identities=26% Similarity=0.255 Sum_probs=27.9
Q ss_pred CCeEEEEcC-CchHHHHHHHHHhhhcC--CCceEEEcC
Q psy12401 149 FDGFVILHG-TDTLCYTAAALSFMFEN--LGKTVIITG 183 (255)
Q Consensus 149 ~dG~VVtHG-TDTLeeTA~~Lsl~l~~--~~kPVVlTG 183 (255)
.|+||++-| ..||+|...+|.+.-.. ..||||+-+
T Consensus 132 sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 132 AVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp EEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 689999875 89999999998874322 359999986
No 22
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=46.98 E-value=38 Score=29.62 Aligned_cols=53 Identities=13% Similarity=0.018 Sum_probs=32.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCC-CceEEE
Q psy12401 125 LDSSNMTVDDWINIASDVFDNYE--NFDGFVILHGTDTLCYTAAALSFMFENL-GKTVII 181 (255)
Q Consensus 125 ~dSs~~t~~d~~~La~~I~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~-~kPVVl 181 (255)
.+.-.-+.++..+....+-+.+. +++.+||.+-|+|- .+|+.+-... +.|||=
T Consensus 44 ~PYG~~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~~----~al~~lr~~~~~iPvig 99 (268)
T 3out_A 44 IPYGTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISA----IAKDIVQEIAKAIPVID 99 (268)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHH----HHHHHHHHHHTTSCEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChHH----HHHHHHHHhcCCCCEEe
Confidence 34455556666665554444443 48999999988874 3444433344 688873
No 23
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=46.45 E-value=16 Score=29.71 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHhhc-CCCeEEEEcCC
Q psy12401 132 VDDWINIASDVFDNYE-NFDGFVILHGT 158 (255)
Q Consensus 132 ~~d~~~La~~I~~~~~-~~dG~VVtHGT 158 (255)
++| .+|.+.+++.++ ++|=||+|=||
T Consensus 50 ~Dd-~~i~~al~~a~~~~~DlVittGG~ 76 (164)
T 3pzy_A 50 ADG-SPVGEALRKAIDDDVDVILTSGGT 76 (164)
T ss_dssp CSS-HHHHHHHHHHHHTTCSEEEEESCC
T ss_pred CCH-HHHHHHHHHHHhCCCCEEEECCCC
Confidence 566 778888888875 68977777666
No 24
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=46.28 E-value=89 Score=26.26 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=28.2
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCeEEEEcCCc
Q psy12401 118 VLEYDSLLDSSNMTVDDWINIASDVFDNYENFDGFVILHGTD 159 (255)
Q Consensus 118 v~e~~~~~dSs~~t~~d~~~La~~I~~~~~~~dG~VVtHGTD 159 (255)
++.+.+. .---++++.+.+|.+.+++.-.+. .+||+.|..
T Consensus 18 ~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~-~~vvltg~g 57 (232)
T 3ot6_A 18 TLTLNNG-KVNAISPDVIIAFNAALDQAEKDR-AIVIVTGQP 57 (232)
T ss_dssp EEEECCT-TTTCBCHHHHHHHHHHHHHHHHTT-CEEEEECBT
T ss_pred EEEECCC-CCCCCCHHHHHHHHHHHHHHhcCC-CEEEEECCC
Confidence 3444442 246789999999999998876554 677777763
No 25
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=46.12 E-value=45 Score=28.51 Aligned_cols=47 Identities=11% Similarity=0.133 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHHHHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 130 MTVDDWINIASDVFDNYE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 130 ~t~~d~~~La~~I~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
-+.+...+....+-+.+. ++|.|||.+.|++- ++++.+-...+.|||
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~~----~~~~~lr~~~~iPvi 90 (255)
T 2jfz_A 42 KDPTTIKQFGLEALDFFKPHEIELLIVACNTASA----LALEEMQKYSKIPIV 90 (255)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHHH----HTHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhH----HHHHHHHHhCCCCEE
Confidence 344554444333333332 49999999999873 234543344578877
No 26
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=45.27 E-value=61 Score=28.11 Aligned_cols=47 Identities=19% Similarity=0.174 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHH-HHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 130 MTVDDWINIASDV-FDNYE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 130 ~t~~d~~~La~~I-~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
-+.++..+....+ +...+ ++|.|||.+-|++- ++|+.+-...+.|||
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas~----~~l~~lr~~~~iPVi 94 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTATA----IALDDIQRSVGIPVV 94 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHH----HHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhhH----HHHHHHHHHCCCCEE
Confidence 3445444443333 33333 48999999998873 345543344578877
No 27
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=45.07 E-value=81 Score=27.02 Aligned_cols=40 Identities=13% Similarity=0.124 Sum_probs=26.6
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 118 VLEYDSLLDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 118 v~e~~~~~dSs~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
++.+.+..- --++.+.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 18 ~itlnrp~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 58 (261)
T 3pea_A 18 VATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGE 58 (261)
T ss_dssp EEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEES
T ss_pred EEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECC
Confidence 344444223 669999999999999887644 3355555565
No 28
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=44.77 E-value=21 Score=31.35 Aligned_cols=28 Identities=14% Similarity=0.025 Sum_probs=19.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 148 NFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 148 ~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
.+|.|||.+-|.+- +++.+-...+.|||
T Consensus 99 Gad~IVIaCNTah~-----~l~~lr~~~~iPvi 126 (268)
T 3s81_A 99 GAECIVIPCNTAHY-----WFDDLQNVAKARMI 126 (268)
T ss_dssp TCSEEECSCSGGGG-----GHHHHHHHCSSEEE
T ss_pred CCCEEEEeCCCHHH-----HHHHHHHHCCCCEE
Confidence 58999999999764 34443344578887
No 29
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A
Probab=43.86 E-value=42 Score=29.92 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=40.4
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHH----HHHHhhhcCCCceEEEcCCCCCCCC
Q psy12401 129 NMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTA----AALSFMFENLGKTVIITGSQISIFQ 190 (255)
Q Consensus 129 ~~t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA----~~Lsl~l~~~~kPVVlTGAmrP~~~ 190 (255)
|...+|.++|+-.+..---+.-||.+++|--+++.++ .+|.+ +....+| |.-|+.+|+..
T Consensus 9 D~GiDDa~AL~~al~~p~i~l~gIt~v~GN~~~~~~~~na~~ll~~-~g~~dIP-V~~Ga~~pl~~ 72 (314)
T 2mas_A 9 DPGLDDAVAILLAHGNPEIELLAITTVVGNQTLAKVTRNAQLVADI-AGITGVP-IAAGCDKPLVR 72 (314)
T ss_dssp CCSHHHHHHHHHHHHCTTEEEEEEEECSSSSCHHHHHHHHHHHHHH-TTCCSCC-EEECCSSCSSS
T ss_pred CCChHHHHHHHHHHhCCCCEEEEEEEccCCcCHHHHHHHHHHHHHH-hCCCCCC-EEeCCCcccCC
Confidence 3468999999876664211367999999998887665 34444 3233688 55699888643
No 30
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=43.56 E-value=40 Score=27.86 Aligned_cols=69 Identities=10% Similarity=0.096 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCC---CCCChHHHHHHHHHHHHh
Q psy12401 131 TVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIF---QPRSDGVDNFIASLILAG 207 (255)
Q Consensus 131 t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~---~~~sDg~~NL~~Av~~A~ 207 (255)
.++...++.+.+.+ .++||||+.-- +. . ..+.. +...++|||+.+...+.. ....|-..--..|+....
T Consensus 48 ~~~~~~~~~~~l~~--~~vdgiIi~~~-~~-~---~~~~~-l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~ 119 (276)
T 3jy6_A 48 DIEREKTLLRAIGS--RGFDGLILQSF-SN-P---QTVQE-ILHQQMPVVSVDREMDACPWPQVVTDNFEAAKAATTAFR 119 (276)
T ss_dssp CHHHHHHHHHHHHT--TTCSEEEEESS-CC-H---HHHHH-HHTTSSCEEEESCCCTTCSSCEEECCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh--CCCCEEEEecC-Cc-H---HHHHH-HHHCCCCEEEEecccCCCCCCEEEEChHHHHHHHHHHHH
Confidence 34444444333332 24899998754 44 2 23444 336789999999876543 234444444444444333
No 31
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=42.89 E-value=92 Score=26.19 Aligned_cols=41 Identities=10% Similarity=0.086 Sum_probs=27.2
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCeEEEEcCCc
Q psy12401 118 VLEYDSLLDSSNMTVDDWINIASDVFDNYENFDGFVILHGTD 159 (255)
Q Consensus 118 v~e~~~~~dSs~~t~~d~~~La~~I~~~~~~~dG~VVtHGTD 159 (255)
++.+.+. .---++++.+.+|.+.+++.-++-..+||+.|..
T Consensus 17 ~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~vr~vvltg~g 57 (233)
T 3r6h_A 17 VIRMDDG-KVNVLGPTMQQALNEAIDAADRDNVGALVIAGNH 57 (233)
T ss_dssp EEEECCS-SSCCCSHHHHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred EEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 3444442 2467899999999999887654323566666763
No 32
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=42.15 E-value=28 Score=29.08 Aligned_cols=28 Identities=21% Similarity=0.194 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhh-cCCCeEEEEcCCc
Q psy12401 132 VDDWINIASDVFDNY-ENFDGFVILHGTD 159 (255)
Q Consensus 132 ~~d~~~La~~I~~~~-~~~dG~VVtHGTD 159 (255)
++|...|.+.+++.+ +++|=||+|=||.
T Consensus 72 ~Dd~~~I~~al~~a~~~~~DlVIttGGts 100 (185)
T 3rfq_A 72 EADEVDIRNALNTAVIGGVDLVVSVGGTG 100 (185)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEESCCS
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 456777888888877 5689888887764
No 33
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=42.10 E-value=70 Score=25.25 Aligned_cols=63 Identities=13% Similarity=0.111 Sum_probs=37.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHHHHHHHhCC----CCCcEEEEeC
Q psy12401 149 FDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNY----VIPEVTVYFH 219 (255)
Q Consensus 149 ~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A~~~----~~~GV~V~f~ 219 (255)
.--+|++||..+=+..+.....++.. +.|-+ .+.+..+.+..+..-+.-+... ...||+|..+
T Consensus 5 igiiIvtHG~s~A~~l~~~a~~i~G~---~~~~a-----id~~~~~~~~~~~~~i~~~i~~~~~d~g~GVLiL~D 71 (139)
T 3gdw_A 5 VGVFVLMHGDSTASSMLKTAQELLGT---SIGTA-----MNMPLTMEVQTMYEQLRNQVITQKESLNNGILLLTD 71 (139)
T ss_dssp CEEEEEEESSSHHHHHHHHHHHHHTC---CCCEE-----EEECTTSCHHHHHHHHHHHHHTSTGGGTTCEEEEEC
T ss_pred eeEEEEcCCHHHHHHHHHHHHHHcCc---ccEEE-----EEccCCCCHHHHHHHHHHHHHhhcCCCCCCEEEEEe
Confidence 34678899998888888888877743 22221 1333444555555555544432 3468988765
No 34
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=42.08 E-value=21 Score=30.64 Aligned_cols=48 Identities=15% Similarity=0.142 Sum_probs=35.5
Q ss_pred CCeEEEEc-CCchHHHHHHHHHhh-hcCCCceEEEcCCCCCCCCCCChHHHHHHH
Q psy12401 149 FDGFVILH-GTDTLCYTAAALSFM-FENLGKTVIITGSQISIFQPRSDGVDNFIA 201 (255)
Q Consensus 149 ~dG~VVtH-GTDTLeeTA~~Lsl~-l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 201 (255)
.|+||++- |..||+|..-.|.+. +....|||||-+.. ...|...++.+
T Consensus 106 sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~-----gfw~~l~~~l~ 155 (216)
T 1ydh_A 106 AEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVD-----GYYNNLLALFD 155 (216)
T ss_dssp CSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGG-----GTTHHHHHHHH
T ss_pred CCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCC-----ccchHHHHHHH
Confidence 68999987 589999999887763 23468999998753 25666666654
No 35
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=40.88 E-value=26 Score=29.72 Aligned_cols=48 Identities=23% Similarity=0.250 Sum_probs=34.9
Q ss_pred CCeEEEEc-CCchHHHHHHHHHhhh-cCCCceEEEcCCCCCCCCCCChHHHHHHH
Q psy12401 149 FDGFVILH-GTDTLCYTAAALSFMF-ENLGKTVIITGSQISIFQPRSDGVDNFIA 201 (255)
Q Consensus 149 ~dG~VVtH-GTDTLeeTA~~Lsl~l-~~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 201 (255)
.|+||++= |..||+|..-+|.+.- ...+|||||-+.. ...|...++.+
T Consensus 118 sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~-----gfw~~l~~~l~ 167 (199)
T 3qua_A 118 SDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPF-----GHYDGLLTWLR 167 (199)
T ss_dssp CSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTT-----STTHHHHHHHH
T ss_pred cCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCC-----ccchHHHHHHH
Confidence 68999886 6899999988888632 2358999998753 24666666544
No 36
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=40.47 E-value=1.5e+02 Score=25.35 Aligned_cols=41 Identities=7% Similarity=0.105 Sum_probs=27.8
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCc
Q psy12401 118 VLEYDSLLDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGTD 159 (255)
Q Consensus 118 v~e~~~~~dSs~~t~~d~~~La~~I~~~~~~-~dG~VVtHGTD 159 (255)
++.+.+..- --++++.+.+|.+.+++.-.+ --.+||+.|..
T Consensus 19 ~itlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g 60 (263)
T 3l3s_A 19 TLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPG 60 (263)
T ss_dssp EEEECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCS
T ss_pred EEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC
Confidence 444544333 679999999999999887654 23556666754
No 37
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=40.32 E-value=20 Score=29.99 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=35.2
Q ss_pred CCeEEEEc-CCchHHHHHHHHHhhh-cCCCceEEEcCCCCCCCCCCChHHHHHHH
Q psy12401 149 FDGFVILH-GTDTLCYTAAALSFMF-ENLGKTVIITGSQISIFQPRSDGVDNFIA 201 (255)
Q Consensus 149 ~dG~VVtH-GTDTLeeTA~~Lsl~l-~~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 201 (255)
.|+||++- |..||+|...+|.+.- ....|||||-+. ....|+..++.+
T Consensus 98 sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~-----~g~~~~l~~~l~ 147 (191)
T 1t35_A 98 ADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV-----NGYFEPMMKMVK 147 (191)
T ss_dssp CSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG-----GGTTHHHHHHHH
T ss_pred CCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC-----CcccchHHHHHH
Confidence 68999987 4899999988887632 235699999875 125666666655
No 38
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=40.12 E-value=1.3e+02 Score=25.75 Aligned_cols=39 Identities=5% Similarity=0.082 Sum_probs=26.8
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHhhcC--CCeEEEEc
Q psy12401 117 KVLEYDSLLDSSNMTVDDWINIASDVFDNYEN--FDGFVILH 156 (255)
Q Consensus 117 ~v~e~~~~~dSs~~t~~d~~~La~~I~~~~~~--~dG~VVtH 156 (255)
-++.+.+. .---++++.+.+|.+.+++.-.+ +..||++-
T Consensus 20 ~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg 60 (265)
T 2ppy_A 20 AEIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMS 60 (265)
T ss_dssp EEEEECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEE
T ss_pred EEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEc
Confidence 34455543 44678999999999999887654 55555554
No 39
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=39.81 E-value=1.3e+02 Score=25.29 Aligned_cols=30 Identities=3% Similarity=0.014 Sum_probs=21.9
Q ss_pred CCCCCHHHHHHHHHHHHHhhcC--CCeEEEEc
Q psy12401 127 SSNMTVDDWINIASDVFDNYEN--FDGFVILH 156 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~--~dG~VVtH 156 (255)
---++++.+.+|.+.+++.-.+ +..||++-
T Consensus 21 ~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg 52 (250)
T 2a7k_A 21 HNPFSRTLETSVKDALARANADDSVRAVVVYG 52 (250)
T ss_dssp TCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEC
Confidence 3568999999999999887644 45555543
No 40
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=39.41 E-value=28 Score=29.22 Aligned_cols=48 Identities=17% Similarity=0.264 Sum_probs=35.7
Q ss_pred CCeEEEEc-CCchHHHHHHHHHhhh-cCCCceEEEcCCCCCCCCCCChHHHHHHH
Q psy12401 149 FDGFVILH-GTDTLCYTAAALSFMF-ENLGKTVIITGSQISIFQPRSDGVDNFIA 201 (255)
Q Consensus 149 ~dG~VVtH-GTDTLeeTA~~Lsl~l-~~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 201 (255)
.|+||++= |..||+|..-+|.+.- ....|||||-+.. ...|...++.+
T Consensus 109 sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~-----gfw~~l~~~l~ 158 (189)
T 3sbx_A 109 ANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPW-----GHFDGLRAWLS 158 (189)
T ss_dssp CSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTT-----CTTHHHHHHHH
T ss_pred CCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCC-----ccchHHHHHHH
Confidence 68999987 5799999988887632 2358999998753 35677766655
No 41
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=39.24 E-value=63 Score=28.28 Aligned_cols=51 Identities=22% Similarity=0.124 Sum_probs=34.1
Q ss_pred CCCCCCHHHHHHHHHHHHHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 126 DSSNMTVDDWINIASDVFDNYE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 126 dSs~~t~~d~~~La~~I~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
|=-.-+.++..+.+..+-+.+. +++.+||.+-|.|- .+|+.+-...+.|||
T Consensus 43 PYG~ks~~~i~~~~~~~~~~L~~~g~~~IVIACNTa~~----~al~~lr~~~~iPvi 95 (269)
T 3ist_A 43 PYGPRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATA----AALYDIREKLDIPVI 95 (269)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHH----HHHHHHHHHCSSCEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCccH----HHHHHHHHhcCCCEE
Confidence 3445667777777666655553 48999999988773 234443345678988
No 42
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=39.01 E-value=29 Score=33.41 Aligned_cols=68 Identities=16% Similarity=0.045 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCC----CCCCCCChHHHHHHHH
Q psy12401 130 MTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQI----SIFQPRSDGVDNFIAS 202 (255)
Q Consensus 130 ~t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmr----P~~~~~sDg~~NL~~A 202 (255)
.|+++..++++.+. .-+++||||+.+.|=.-+.+..-+ +..++|||++=+-|. |++.... ...||.++
T Consensus 55 ~t~~~~~~~~~~~n-~~~~vdgvi~~~~TFs~a~~~i~~---l~~l~~PvL~~~~q~~~~ip~~~id~-d~m~lnqs 126 (500)
T 4f2d_A 55 TTPDEITAICRDAN-YDDRCAGLVVWLHTFSPAKMWING---LTMLNKPLLQFHTQFNAALPWDSIDM-DFMNLNQT 126 (500)
T ss_dssp CSHHHHHHHHHHHH-HCTTEEEEEEECCSCCCTHHHHHH---HHHCCSCEEEEECCSCSSCCTTTCCH-HHHHHCCH
T ss_pred CCHHHHHHHHHHhc-cccCCcEEEEeCCcCccHHHHHHH---HHhcCCCEEEEeCCCCCCCCccccch-HHHhcccc
Confidence 45777777776663 123599999999999988764332 234689999988764 3333333 56777744
No 43
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=38.47 E-value=1.1e+02 Score=26.55 Aligned_cols=41 Identities=20% Similarity=0.099 Sum_probs=26.9
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCc
Q psy12401 118 VLEYDSLLDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGTD 159 (255)
Q Consensus 118 v~e~~~~~dSs~~t~~d~~~La~~I~~~~~~-~dG~VVtHGTD 159 (255)
++.+.+..- --++++.+.+|.+.+++.-.+ --.+||+.|..
T Consensus 36 ~ItlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g 77 (277)
T 4di1_A 36 TLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGH 77 (277)
T ss_dssp EEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCS
T ss_pred EEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC
Confidence 344444333 679999999999999887644 23555555553
No 44
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=37.50 E-value=53 Score=26.44 Aligned_cols=27 Identities=30% Similarity=0.366 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHhhc--CCCeEEEEcCC
Q psy12401 132 VDDWINIASDVFDNYE--NFDGFVILHGT 158 (255)
Q Consensus 132 ~~d~~~La~~I~~~~~--~~dG~VVtHGT 158 (255)
++|..+|.+.+++.++ ++|=||+|=||
T Consensus 54 ~Dd~~~i~~~l~~~~~~~~~DlVittGG~ 82 (169)
T 1y5e_A 54 KDDKESIQQAVLAGYHKEDVDVVLTNGGT 82 (169)
T ss_dssp CSSHHHHHHHHHHHHTCTTCSEEEEECCC
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 5667888999998887 69988888888
No 45
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=37.24 E-value=46 Score=26.95 Aligned_cols=27 Identities=19% Similarity=0.161 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhhcC--CCeEEEEcCC
Q psy12401 132 VDDWINIASDVFDNYEN--FDGFVILHGT 158 (255)
Q Consensus 132 ~~d~~~La~~I~~~~~~--~dG~VVtHGT 158 (255)
++|..+|.+.+++.+++ +|=||+|=||
T Consensus 51 ~Dd~~~i~~~l~~a~~~~~~DlVittGG~ 79 (172)
T 1mkz_A 51 KENRYAIRAQVSAWIASDDVQVVLITGGT 79 (172)
T ss_dssp CSCHHHHHHHHHHHHHSSSCCEEEEESCC
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEeCCCC
Confidence 46678888888888764 8888887777
No 46
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=37.23 E-value=28 Score=28.01 Aligned_cols=27 Identities=19% Similarity=-0.026 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhhc--CCCeEEEEcCC
Q psy12401 132 VDDWINIASDVFDNYE--NFDGFVILHGT 158 (255)
Q Consensus 132 ~~d~~~La~~I~~~~~--~~dG~VVtHGT 158 (255)
++|...|.+.+++.++ ++|=||+|=||
T Consensus 44 ~Dd~~~i~~~l~~~~~~~~~DlVittGG~ 72 (164)
T 2is8_A 44 PDEPPMIKKVLRLWADREGLDLILTNGGT 72 (164)
T ss_dssp CSCHHHHHHHHHHHHHTSCCSEEEEESCC
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 5667888899988886 68988888887
No 47
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=36.82 E-value=21 Score=29.28 Aligned_cols=34 Identities=21% Similarity=0.413 Sum_probs=27.1
Q ss_pred CCeEEEEcC-CchHHHHHHHHHhhhcC--CCceEEEcC
Q psy12401 149 FDGFVILHG-TDTLCYTAAALSFMFEN--LGKTVIITG 183 (255)
Q Consensus 149 ~dG~VVtHG-TDTLeeTA~~Lsl~l~~--~~kPVVlTG 183 (255)
.|+||++-| ..||+|...+|.+.-.. .+|| ||.+
T Consensus 98 sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~ 134 (171)
T 1weh_A 98 GAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD 134 (171)
T ss_dssp EEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC
T ss_pred CCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC
Confidence 689999875 89999999999875434 3699 8777
No 48
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=35.85 E-value=51 Score=28.22 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=22.5
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCc
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGTD 159 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGTD 159 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|..
T Consensus 28 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g 60 (255)
T 3p5m_A 28 NAVDTPMLEELSVHIRDAEADESVRAVLLTGAG 60 (255)
T ss_dssp TEECHHHHHHHHHHHHHHHHCTTCCEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC
Confidence 448999999999999887644 33455555653
No 49
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=35.07 E-value=45 Score=28.09 Aligned_cols=47 Identities=13% Similarity=-0.025 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHhhc-CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCC
Q psy12401 131 TVDDWINIASDVFDNYE-NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQIS 187 (255)
Q Consensus 131 t~~d~~~La~~I~~~~~-~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP 187 (255)
.++....+.+. ..+ ++||||++ |++... +++. . ....|||+.+...|
T Consensus 47 ~~~~~~~~~~~---l~~~~vDgII~~-~~~~~~---~~~~--~-~~~iPvV~~~~~~~ 94 (295)
T 3lft_A 47 DQSKVATMSKQ---LVANGNDLVVGI-ATPAAQ---GLAS--A-TKDLPVIMAAITDP 94 (295)
T ss_dssp CHHHHHHHHHH---HTTSSCSEEEEE-SHHHHH---HHHH--H-CSSSCEEEESCSCT
T ss_pred CHHHHHHHHHH---HHhcCCCEEEEC-CcHHHH---HHHH--c-CCCCCEEEEeccCh
Confidence 45544444433 333 48998876 543322 1222 1 46789999986554
No 50
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=34.77 E-value=40 Score=27.49 Aligned_cols=27 Identities=15% Similarity=0.108 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhhc--CCCeEEEEcCC
Q psy12401 132 VDDWINIASDVFDNYE--NFDGFVILHGT 158 (255)
Q Consensus 132 ~~d~~~La~~I~~~~~--~~dG~VVtHGT 158 (255)
++|..+|.+.+++.++ ++|=||+|=||
T Consensus 50 ~Dd~~~I~~~l~~~~~~~~~DlVittGG~ 78 (178)
T 2pbq_A 50 PDERDLIEKTLIELADEKGCSLILTTGGT 78 (178)
T ss_dssp CSCHHHHHHHHHHHHHTSCCSEEEEESCC
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 5667888889988886 68988888777
No 51
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=34.74 E-value=1.1e+02 Score=26.73 Aligned_cols=47 Identities=19% Similarity=0.152 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHHHhh-c-CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEE
Q psy12401 131 TVDDWINIASDVFDNY-E-NFDGFVILHGTDTLCYTAAALSFMFENLGKTVII 181 (255)
Q Consensus 131 t~~d~~~La~~I~~~~-~-~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVl 181 (255)
+.+...+....+-+.+ + ++|.|||.+-|++-. +++.+-...+.|||=
T Consensus 67 s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas~~----~l~~lr~~~~iPVig 115 (290)
T 2vvt_A 67 PAEQVVQFTWEMADFLLKKRIKMLVIACNTATAV----ALEEIKAALPIPVVG 115 (290)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHH----HHHHHHHHCSSCEEE
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEeCcchhHH----HHHHHHHhCCCCEEc
Confidence 3444444433333333 2 499999999999732 344433345788773
No 52
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=34.51 E-value=92 Score=27.41 Aligned_cols=47 Identities=23% Similarity=0.248 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHHHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 130 MTVDDWINIASDVFDNYE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 130 ~t~~d~~~La~~I~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
-+.+...+.+..+-+.+. ++|.+||.+-|+| +++|+.+-...+.|||
T Consensus 66 ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~----~~al~~lr~~~~iPvi 114 (274)
T 3uhf_A 66 KDKDTIIKFCLEALDFFEQFQIDMLIIACNTAS----AYALDALRAKAHFPVY 114 (274)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH----HHSHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChh----HHHHHHHHHhcCCCEE
Confidence 344444444444444443 3899999998876 2334443345678988
No 53
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=34.25 E-value=1.3e+02 Score=26.41 Aligned_cols=32 Identities=6% Similarity=0.111 Sum_probs=24.9
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCeEEEEcCC
Q psy12401 127 SSNMTVDDWINIASDVFDNYENFDGFVILHGT 158 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~~dG~VVtHGT 158 (255)
---++++.|.+|.+.+++.-.+-..+||+.|.
T Consensus 45 ~Nal~~~m~~~L~~al~~~~~d~~r~vVltg~ 76 (291)
T 2fbm_A 45 KNALNTEVIKEIVNALNSAAADDSKLVLFSAA 76 (291)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHSSCSEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence 46789999999999998776442377887776
No 54
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=33.58 E-value=38 Score=27.57 Aligned_cols=44 Identities=14% Similarity=0.202 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 135 WINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 135 ~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
=-+|.++|++...++||+||-=|-=|- |..+|-=.+...++|+|
T Consensus 53 EgeLid~Ih~a~~~~dgiiiNpgA~TH--tSvAlrDAl~~v~~P~V 96 (143)
T 1gqo_A 53 EGDLIDAIHEAEEQYSGIVLNPGALSH--YSYAIRDAVSSISLPVV 96 (143)
T ss_dssp HHHHHHHHHHHTTTCSEEEEECGGGGG--TCHHHHHHHHTSCSCEE
T ss_pred HHHHHHHHHHhhhcCcEEEEccchhcc--ccHHHHHHHHhCCCCEE
Confidence 356788888888789999998885552 33344333557789988
No 55
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=32.85 E-value=1.4e+02 Score=23.10 Aligned_cols=63 Identities=13% Similarity=0.124 Sum_probs=37.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHHHHHHHhCC--CCCcEEEEeC
Q psy12401 149 FDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIASLILAGNY--VIPEVTVYFH 219 (255)
Q Consensus 149 ~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A~~~--~~~GV~V~f~ 219 (255)
.--+|++||..+=+..+.....++.. ..-..+ +.+..+.+..+..-+.-+... ...||+|..+
T Consensus 5 igiiivsHG~~~A~~l~~~a~~i~G~-~~~~ai-------d~~~~~~~~~~~~~i~~~i~~~d~~~GVLiL~D 69 (130)
T 3gx1_A 5 VEVIVMMHGRSTATSMVETVQELLSI-ESGIAL-------DMPLTVEVKAMYEKLKQTVVKLNPVKGVLILSD 69 (130)
T ss_dssp CEEEEEEESSSHHHHHHHHHHHHHTC-CCCEEE-------EECTTSCHHHHHHHHHHHHHTSCCTTCEEEEEC
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHcCc-cCEEEE-------EecCCCCHHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 34578899997877777777876643 221112 233344555555555544432 3468988765
No 56
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=31.87 E-value=1.4e+02 Score=25.91 Aligned_cols=31 Identities=10% Similarity=0.233 Sum_probs=22.1
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 55 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 86 (287)
T 2vx2_A 55 NTLSLAMLKSLQSDILHDADSNDLKVIIISAE 86 (287)
T ss_dssp TCCCHHHHHHHHHHHHTTTTCTTCCEEEEEES
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCeEEEEEECC
Confidence 568999999999999877644 2245555554
No 57
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=31.81 E-value=64 Score=27.10 Aligned_cols=30 Identities=37% Similarity=0.386 Sum_probs=24.4
Q ss_pred CCCeEEEEcC-CchHHHHHHHHHhhhcCCCceEEEc
Q psy12401 148 NFDGFVILHG-TDTLCYTAAALSFMFENLGKTVIIT 182 (255)
Q Consensus 148 ~~dG~VVtHG-TDTLeeTA~~Lsl~l~~~~kPVVlT 182 (255)
..|+|||+=| ..||+|...+|. ..|||++-
T Consensus 118 ~sda~IvlpGG~GTL~E~~eal~-----~~kPV~ll 148 (195)
T 1rcu_A 118 NADVVVSIGGEIGTAIEILGAYA-----LGKPVILL 148 (195)
T ss_dssp TCSEEEEESCCHHHHHHHHHHHH-----TTCCEEEE
T ss_pred hCCEEEEecCCCcHHHHHHHHHh-----cCCCEEEE
Confidence 4799999975 789999877766 37999987
No 58
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=31.74 E-value=35 Score=28.16 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 135 WINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 135 ~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
=-+|.++|++...++|||||-=|-=|- |.++|-=.+...++|+|
T Consensus 54 EGeLId~Ih~a~~~~dgiIINpgA~TH--tSvAlrDAl~~v~~P~V 97 (154)
T 1uqr_A 54 EESLINRIHQAFQNTDFIIINPGAFTH--TSVAIRDALLAVSIPFI 97 (154)
T ss_dssp HHHHHHHHHHTTTTCCEEEEECTTHHH--HCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHhhhcCcEEEECcchhcc--chHHHHHHHHhCCCCEE
Confidence 356888899888789999999886552 33444333556688988
No 59
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=30.77 E-value=95 Score=26.88 Aligned_cols=32 Identities=6% Similarity=0.087 Sum_probs=21.2
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCeEEEEcCCc
Q psy12401 128 SNMTVDDWINIASDVFDNYENFDGFVILHGTD 159 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~~dG~VVtHGTD 159 (255)
--++++.+.+|.+.+++.-.+--.+||+.|..
T Consensus 43 Nal~~~~~~~L~~al~~~~~d~vr~vVltg~G 74 (264)
T 3he2_A 43 NALNSQLVEELTQAIRKAGDGSARAIVLTGQG 74 (264)
T ss_dssp TCBCHHHHHHHHHHHHCC---CCSEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHHHhhCCceEEEEECCC
Confidence 45899999999999987654422456666653
No 60
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=30.73 E-value=48 Score=28.55 Aligned_cols=50 Identities=22% Similarity=0.078 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCC
Q psy12401 131 TVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIF 189 (255)
Q Consensus 131 t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~ 189 (255)
.++.+..+++.+.+ .++|-|| +-||.... +++. ....+||||+|--.|..
T Consensus 54 d~~~~~~~~~~l~~--~~~DlIi-ai~t~aa~---a~~~---~~~~iPVVf~~v~dp~~ 103 (302)
T 3lkv_A 54 NPAIAVQIARQFVG--ENPDVLV-GIATPTAQ---ALVS---ATKTIPIVFTAVTDPVG 103 (302)
T ss_dssp CHHHHHHHHHHHHT--TCCSEEE-EESHHHHH---HHHH---HCSSSCEEEEEESCTTT
T ss_pred CHHHHHHHHHHHHh--cCCcEEE-EcCCHHHH---HHHh---hcCCCCeEEEecCCcch
Confidence 35555555544332 2488554 44654322 1122 24579999999877654
No 61
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=30.57 E-value=60 Score=27.86 Aligned_cols=32 Identities=3% Similarity=0.105 Sum_probs=23.3
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCc
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGTD 159 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGTD 159 (255)
--++.+.|.+|.+.+++.-.+ --.+||+.|..
T Consensus 27 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g 59 (258)
T 4fzw_A 27 NALNNALLMQLVNELEAAATDTSISVCVITGNA 59 (258)
T ss_dssp TCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCS
T ss_pred CCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCC
Confidence 458999999999999887755 23555555653
No 62
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=30.39 E-value=66 Score=28.13 Aligned_cols=34 Identities=21% Similarity=0.192 Sum_probs=25.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCCeEEEEcCCchHH
Q psy12401 125 LDSSNMTVDDWINIASDVFDNYENFDGFVILHGTDTLC 162 (255)
Q Consensus 125 ~dSs~~t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLe 162 (255)
.....+++..+..|.+.|++ --|+|+++|-++..
T Consensus 59 ~~~~~l~~~~~~~L~~yV~~----GGgLi~~gG~~s~~ 92 (259)
T 3rht_A 59 YPAERMTAQAIDQLVTMVKA----GCGLVMLGGWESYH 92 (259)
T ss_dssp CCGGGBCHHHHHHHHHHHHT----TCEEEEECSTTSSS
T ss_pred CccccCCHHHHHHHHHHHHh----CCeEEEecCccccc
Confidence 34456888888888887763 57999999977643
No 63
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=30.28 E-value=42 Score=28.50 Aligned_cols=48 Identities=23% Similarity=0.114 Sum_probs=26.9
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCC
Q psy12401 131 TVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQIS 187 (255)
Q Consensus 131 t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP 187 (255)
.++...++.+.+.+ .++||||++ |++... .++. . ..+.|||+.+...|
T Consensus 54 ~~~~~~~~~~~l~~--~~vDgII~~-~~~~~~---~~~~--~-~~~iPvV~~~~~~~ 101 (302)
T 2qh8_A 54 NPAIAVQIARQFVG--ENPDVLVGI-ATPTAQ---ALVS--A-TKTIPIVFTAVTDP 101 (302)
T ss_dssp CHHHHHHHHHHHHH--TCCSEEEEE-SHHHHH---HHHH--H-CSSSCEEEEEESCT
T ss_pred CHHHHHHHHHHHHh--CCCCEEEEC-ChHHHH---HHHh--c-CCCcCEEEEecCCH
Confidence 45555454444432 248999876 543211 1222 1 56899999986544
No 64
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=30.25 E-value=1.7e+02 Score=25.49 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHHHHhhc--CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEE
Q psy12401 129 NMTVDDWINIASDVFDNYE--NFDGFVILHGTDTLCYTAAALSFMFENLGKTVII 181 (255)
Q Consensus 129 ~~t~~d~~~La~~I~~~~~--~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVl 181 (255)
.-+.+...+....+-+.+. ++|.|||.+-|++- ++++.+-...+.|||=
T Consensus 63 ~~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas~----~~l~~lr~~~~iPVig 113 (286)
T 2jfq_A 63 PRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATA----VALEYLQKTLSISVIG 113 (286)
T ss_dssp TSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHH----HHHHHHHHHCSSEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchhH----HHHHHHHHhCCCCEEe
Confidence 3445555554444434443 48999999999873 2344433345788773
No 65
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=30.02 E-value=1.5e+02 Score=25.42 Aligned_cols=31 Identities=3% Similarity=0.014 Sum_probs=22.2
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 26 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 57 (268)
T 3i47_A 26 NAFDNQLLTEMRIRLDSAINDTNVRVIVLKAN 57 (268)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCSEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCeEEEEEECC
Confidence 558999999999999887644 2345555565
No 66
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=29.94 E-value=46 Score=27.47 Aligned_cols=43 Identities=16% Similarity=0.101 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCC-ceEE
Q psy12401 136 INIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLG-KTVI 180 (255)
Q Consensus 136 ~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~-kPVV 180 (255)
-+|.++|++...++|||||-=|-=|- |.++|-=.+.... +|+|
T Consensus 60 GeLId~Ih~a~~~~dgiIINpgA~TH--tSvAlrDAl~~v~~~P~V 103 (156)
T 1gtz_A 60 GELVDWIHEARLNHCGIVINPAAYSH--TSVAILDALNTCDGLPVV 103 (156)
T ss_dssp HHHHHHHHHHHHHCSEEEEECTTHHH--HCHHHHHHHHTSTTCCEE
T ss_pred HHHHHHHHHhhhcCcEEEECchhhcc--ccHHHHHHHHhcCCCCEE
Confidence 46777888887679999999886552 3444433455677 9988
No 67
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=29.60 E-value=1.1e+02 Score=26.07 Aligned_cols=32 Identities=9% Similarity=0.131 Sum_probs=24.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCeEEEEcCC
Q psy12401 127 SSNMTVDDWINIASDVFDNYENFDGFVILHGT 158 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~~dG~VVtHGT 158 (255)
---++++.+.+|.+.+++.-.+-..+||+.|.
T Consensus 27 ~Nal~~~~~~~L~~al~~~~~d~~r~vvltg~ 58 (261)
T 2gtr_A 27 NNSLNPEVMREVQSALSTAAADDSKLVLLSAV 58 (261)
T ss_dssp TTEECHHHHHHHHHHHHHHHHSSCSCEEEEES
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 46789999999999998766442377777776
No 68
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=29.41 E-value=35 Score=28.20 Aligned_cols=31 Identities=26% Similarity=0.235 Sum_probs=25.3
Q ss_pred CCeEEEEcC-CchHHHHHHHHHhhhcCCCceEEEcCC
Q psy12401 149 FDGFVILHG-TDTLCYTAAALSFMFENLGKTVIITGS 184 (255)
Q Consensus 149 ~dG~VVtHG-TDTLeeTA~~Lsl~l~~~~kPVVlTGA 184 (255)
.|+|||+=| ..||+|...+|. ..|||++-+.
T Consensus 108 sda~IvlpGg~GTL~E~~~al~-----~~kpV~~l~~ 139 (176)
T 2iz6_A 108 SNVLVAVGMGPGTAAEVALALK-----AKKPVVLLGT 139 (176)
T ss_dssp CSEEEEESCCHHHHHHHHHHHH-----TTCCEEEESC
T ss_pred CCEEEEecCCccHHHHHHHHHH-----hCCcEEEEcC
Confidence 699999975 789999877762 4799998876
No 69
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=29.28 E-value=97 Score=29.27 Aligned_cols=30 Identities=23% Similarity=0.453 Sum_probs=24.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCeEEEEcCC
Q psy12401 127 SSNMTVDDWINIASDVFDNYENFDGFVILHGT 158 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~~dG~VVtHGT 158 (255)
|.+++.++..++++.+++. .+|||+|+-+|
T Consensus 305 spd~~~ed~~~iA~~~~~a--GaDgI~v~ntt 334 (443)
T 1tv5_A 305 APDLNQEQKKEIADVLLET--NIDGMIISNTT 334 (443)
T ss_dssp CSCCCHHHHHHHHHHHHHT--TCSEEEECCCB
T ss_pred CCCCCHHHHHHHHHHHHHc--CCCEEEEECCC
Confidence 6788988999999888765 48999887654
No 70
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=29.23 E-value=55 Score=27.34 Aligned_cols=27 Identities=15% Similarity=0.121 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhhc--CCCeEEEEcCC
Q psy12401 132 VDDWINIASDVFDNYE--NFDGFVILHGT 158 (255)
Q Consensus 132 ~~d~~~La~~I~~~~~--~~dG~VVtHGT 158 (255)
++|...|.+.+++.++ ++|=||+|=||
T Consensus 48 ~Dd~~~I~~al~~a~~~~~~DlVitTGGt 76 (195)
T 1di6_A 48 PDEQAIIEQTLCELVDEMSCHLVLTTGGT 76 (195)
T ss_dssp ESCHHHHHHHHHHHHHTSCCSEEEEESCC
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 5667888888888876 58989888888
No 71
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=28.76 E-value=1.3e+02 Score=25.97 Aligned_cols=31 Identities=10% Similarity=0.181 Sum_probs=22.1
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 39 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 70 (279)
T 3g64_A 39 NALTFEAYADLRDLLAELSRRRAVRALVLAGE 70 (279)
T ss_dssp TCBCHHHHHHHHHHHHHHHHTTCCSEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEECC
Confidence 458999999999999887644 2345555554
No 72
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=28.53 E-value=30 Score=28.64 Aligned_cols=71 Identities=11% Similarity=0.088 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCchHH-HHHHHHHhhhcCCCceEEEcCCCCCCCC---CCChHHHHHHHHHH
Q psy12401 131 TVDDWINIASDVFDNYENFDGFVILHGTDTLC-YTAAALSFMFENLGKTVIITGSQISIFQ---PRSDGVDNFIASLI 204 (255)
Q Consensus 131 t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLe-eTA~~Lsl~l~~~~kPVVlTGAmrP~~~---~~sDg~~NL~~Av~ 204 (255)
.++...++.+.+.+ .++||+|+.-...++. .....+.. +...++|||+.+...+... ...|-..--..|+.
T Consensus 56 ~~~~~~~~~~~l~~--~~vdgiIi~~~~~~~~~~~~~~~~~-~~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~ 130 (298)
T 3tb6_A 56 NPDNERRGLENLLS--QHIDGLIVEPTKSALQTPNIGYYLN-LEKNGIPFAMINASYAELAAPSFTLDDVKGGMMAAE 130 (298)
T ss_dssp CHHHHHHHHHHHHH--TCCSEEEECCSSTTSCCTTHHHHHH-HHHTTCCEEEESSCCTTCSSCEEEECHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH--CCCCEEEEecccccccCCcHHHHHH-HHhcCCCEEEEecCcCCCCCCEEEeCcHHHHHHHHH
Confidence 34444444443332 3599999864332110 11112233 2346899999998765432 33444444444443
No 73
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=28.48 E-value=50 Score=27.82 Aligned_cols=44 Identities=23% Similarity=0.275 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhhcC-CCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 135 WINIASDVFDNYEN-FDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 135 ~~~La~~I~~~~~~-~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
=-+|.++|++...+ +|||||-=|-=|- |.++|-=.+...++|+|
T Consensus 64 EGeLId~Ih~a~~~~~dgIIINpgAyTH--tSvAlrDAl~~v~~P~V 108 (176)
T 2c4w_A 64 EGEIIDKIQESVGSEYEGIIINPGAFSH--TSIAIADAIMLAGKPVI 108 (176)
T ss_dssp HHHHHHHHHHHHSSSCCEEEEECGGGGG--TCHHHHHHHHTSSSCEE
T ss_pred HHHHHHHHHHhccCCeeEEEECcchhcc--chHHHHHHHHhCCCCEE
Confidence 35678888888877 9999998885552 33444333557889988
No 74
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=28.48 E-value=1.5e+02 Score=25.59 Aligned_cols=32 Identities=9% Similarity=0.074 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCc
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGTD 159 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGTD 159 (255)
--++++.|.+|.+.+++.-.+ --.+||+.|..
T Consensus 37 NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G 69 (274)
T 4fzw_C 37 NSFNDEMHAQLAECLKQVERDDTIRCLLLTGAG 69 (274)
T ss_dssp SCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC
Confidence 468999999999999887654 23455555654
No 75
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=28.22 E-value=80 Score=26.86 Aligned_cols=48 Identities=17% Similarity=0.129 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHHHHhh-c-CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEE
Q psy12401 130 MTVDDWINIASDVFDNY-E-NFDGFVILHGTDTLCYTAAALSFMFENLGKTVII 181 (255)
Q Consensus 130 ~t~~d~~~La~~I~~~~-~-~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVl 181 (255)
.+.+...+....+-+.+ + ++|+|||.+.|++.. +++.+-...+.|||=
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCnTa~~~----~~~~lr~~~~iPvig 91 (254)
T 1b73_A 42 RSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAY----ALERLKKEINVPVFG 91 (254)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHTT----SHHHHHHHSSSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHH----HHHHHHHhCCCCEEe
Confidence 34555444443333333 2 499999999999721 223222234678774
No 76
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=28.18 E-value=2.4e+02 Score=22.92 Aligned_cols=66 Identities=6% Similarity=0.047 Sum_probs=35.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCC----CCCChHHHHHHHHHHHHhCCCCCcEEEEe
Q psy12401 148 NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIF----QPRSDGVDNFIASLILAGNYVIPEVTVYF 218 (255)
Q Consensus 148 ~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~----~~~sDg~~NL~~Av~~A~~~~~~GV~V~f 218 (255)
++||||+.-...+ + ..+.. +....+|||+.+...+.. ....|-..--..|+.........-+.++.
T Consensus 69 ~vdgiIi~~~~~~-~---~~~~~-l~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~ 138 (292)
T 3k4h_A 69 QIGGIILLYSREN-D---RIIQY-LHEQNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLGHKQIAFIG 138 (292)
T ss_dssp CCCEEEESCCBTT-C---HHHHH-HHHTTCCEEEESCCSSCTTTSCEEECCHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEEeCCCCC-h---HHHHH-HHHCCCCEEEECCCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCceEEEEe
Confidence 4999998643322 2 23344 235689999999876543 23445555555555443332223454444
No 77
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=28.09 E-value=37 Score=28.53 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=30.0
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 136 INIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 136 ~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
-+|.++|++...++|||||-=|-=|- |..+|-=.+...++|+|
T Consensus 82 GeLId~Ih~A~~~~dgIIINPgAyTH--tSvAlrDAL~~v~~P~V 124 (172)
T 3n8k_A 82 AQLLDWIHQAADAAEPVILNAGGLTH--TSVALRDACAELSAPLI 124 (172)
T ss_dssp HHHHHHHHHHHHHTCCEEEECGGGGG--TCHHHHHHHTTCCSCEE
T ss_pred HHHHHHHHHhhhcCcEEEECcchhhh--hhHHHHHHHHhCCCCEE
Confidence 46777788877679999998886552 33344333557889988
No 78
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=28.06 E-value=33 Score=28.30 Aligned_cols=43 Identities=19% Similarity=0.077 Sum_probs=29.2
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 136 INIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 136 ~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
-+|.++|++...++|||||-=|-=|- |.++|-=.+...++|+|
T Consensus 61 geLId~Ih~a~~~~dgiiINpgA~TH--tSvAlrDAl~~~~~P~V 103 (153)
T 3lwz_A 61 HALIDSIHQARGNTDFILINPAAFTH--TSVALRDALLGVQIPFI 103 (153)
T ss_dssp HHHHHHHHHHTTTCSEEEEECGGGGG--TCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHhhhcCceEEEcccccee--chHHHHHHHHhcCCCEE
Confidence 56788888887779999998886552 23333222445678887
No 79
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=27.87 E-value=1.7e+02 Score=24.03 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=29.5
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCC
Q psy12401 129 NMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQ 185 (255)
Q Consensus 129 ~~t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAm 185 (255)
+-.++...+..+.+.+ .++||+|+.. ++. ......+..+ ...++|||+.+..
T Consensus 44 ~~~~~~~~~~~~~l~~--~~vdgiii~~-~~~-~~~~~~~~~~-~~~~ipvV~~~~~ 95 (303)
T 3d02_A 44 STDAPQQVKIIEDLIA--RKVDAITIVP-NDA-NVLEPVFKKA-RDAGIVVLTNESP 95 (303)
T ss_dssp SSCHHHHHHHHHHHHH--TTCSEEEECC-SCH-HHHHHHHHHH-HHTTCEEEEESCT
T ss_pred CCCHHHHHHHHHHHHH--cCCCEEEEec-CCh-HHHHHHHHHH-HHCCCeEEEEecC
Confidence 4456555554443332 3589988764 443 2222334442 3567999998875
No 80
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=27.87 E-value=1.9e+02 Score=24.53 Aligned_cols=39 Identities=8% Similarity=0.279 Sum_probs=25.5
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHhhcC--CCeEEEEcCC
Q psy12401 118 VLEYDSLLDSSNMTVDDWINIASDVFDNYEN--FDGFVILHGT 158 (255)
Q Consensus 118 v~e~~~~~dSs~~t~~d~~~La~~I~~~~~~--~dG~VVtHGT 158 (255)
++.+.+. +.--++++.+.+|.+.+++.-.+ +..||+ .|.
T Consensus 17 ~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVl-tg~ 57 (260)
T 1sg4_A 17 VMKFKNP-PVNSLSLEFLTELVISLEKLENDKSFRGVIL-TSD 57 (260)
T ss_dssp EEEECCT-TTTEECHHHHHHHHHHHHHHHHCTTCCEEEE-EES
T ss_pred EEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCceEEEE-EcC
Confidence 3444432 24568999999999999887644 444544 454
No 81
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=27.86 E-value=51 Score=27.00 Aligned_cols=44 Identities=18% Similarity=-0.000 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhcC-CCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 135 WINIASDVFDNYEN-FDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 135 ~~~La~~I~~~~~~-~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
=-+|.++|++...+ +|||||-=|-=|- |..+|-=.+...++|+|
T Consensus 52 EgeLId~Ih~a~~~~~dgiIINpgA~TH--tSvAlrDAl~~v~~P~V 96 (149)
T 2uyg_A 52 EGQLIEWVQQAHQEGFLAIVLNPGALTH--YSYALLDAIRAQPLPVV 96 (149)
T ss_dssp HHHHHHHHHHTTTTTCSEEEEECGGGGG--TCHHHHHHHHTSCSCEE
T ss_pred HHHHHHHHHHhccCCeeEEEEccchhcc--ccHHHHHHHHhCCCCEE
Confidence 35678889988877 9999998885552 33344334567889988
No 82
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=27.46 E-value=1.3e+02 Score=24.91 Aligned_cols=56 Identities=16% Similarity=-0.032 Sum_probs=28.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCC--CCCCChHHHHHHHHHHHHhC
Q psy12401 148 NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISI--FQPRSDGVDNFIASLILAGN 208 (255)
Q Consensus 148 ~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~--~~~~sDg~~NL~~Av~~A~~ 208 (255)
++||+|+.-...+ + ..+.. +...++|||+.+...+. .....|-..--..|+.....
T Consensus 65 ~vdgiI~~~~~~~-~---~~~~~-l~~~~iPvV~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~ 122 (290)
T 3clk_A 65 PVMGILLLSIALT-D---DNLQL-LQSSDVPYCFLSMGFDDDRPFISSDDEDIGYQATNLLIN 122 (290)
T ss_dssp CCSEEEEESCC--------CHHH-HHCC--CEEEESCC--CCSCEEECCHHHHHHHHHHHHHT
T ss_pred CCCEEEEecccCC-H---HHHHH-HHhCCCCEEEEcCCCCCCCCEEEeChHHHHHHHHHHHHH
Confidence 4999998743322 1 23344 33568999999876553 23345555545555544443
No 83
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=27.24 E-value=85 Score=26.01 Aligned_cols=52 Identities=17% Similarity=0.178 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCC
Q psy12401 131 TVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQIS 187 (255)
Q Consensus 131 t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP 187 (255)
.++...+..+.+.+ .++||||+.--... .....+..+ ....+|||+.++..+
T Consensus 42 ~~~~~~~~i~~l~~--~~vdgiii~~~~~~--~~~~~~~~~-~~~~iPvV~~~~~~~ 93 (306)
T 8abp_A 42 DGEKTLNAIDSLAA--SGAKGFVICTPDPK--LGSAIVAKA-RGYDMKVIAVDDQFV 93 (306)
T ss_dssp SHHHHHHHHHHHHH--TTCCEEEEECSCGG--GHHHHHHHH-HHTTCEEEEESSCCB
T ss_pred CHHHHHHHHHHHHH--cCCCEEEEeCCCch--hhHHHHHHH-HHCCCcEEEeCCCCC
Confidence 45555444433322 24899998753332 222334442 356899999996543
No 84
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=27.20 E-value=1.8e+02 Score=24.60 Aligned_cols=32 Identities=6% Similarity=0.069 Sum_probs=22.6
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCeEEEEcCCc
Q psy12401 128 SNMTVDDWINIASDVFDNYENFDGFVILHGTD 159 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~~dG~VVtHGTD 159 (255)
--++++.+.+|.+.+++.-++--.+||+.|..
T Consensus 29 Nal~~~~~~~L~~al~~~~~~~vr~vVltg~g 60 (254)
T 3isa_A 29 NALSAELVEALIDGVDAAHREQVPLLVFAGAG 60 (254)
T ss_dssp TCBCHHHHHHHHHHHHHHHHTTCSEEEEEEST
T ss_pred CCCCHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 45899999999999887654433455566664
No 85
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=27.07 E-value=1.5e+02 Score=25.24 Aligned_cols=32 Identities=13% Similarity=0.080 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCc
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGTD 159 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGTD 159 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|..
T Consensus 33 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g 65 (267)
T 3oc7_A 33 NALSTALVSQLHQGLRDASSDPAVRVVVLAHTG 65 (267)
T ss_dssp SCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECS
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC
Confidence 458999999999999887654 23455555643
No 86
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=26.96 E-value=1.5e+02 Score=25.13 Aligned_cols=32 Identities=9% Similarity=0.047 Sum_probs=22.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 127 SSNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
---++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 24 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 56 (257)
T 2ej5_A 24 LNAFTEQMNAEVTKALKQAGADPNVRCVVITGA 56 (257)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEES
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECC
Confidence 4568999999999999887644 2244455454
No 87
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=26.96 E-value=95 Score=25.99 Aligned_cols=52 Identities=13% Similarity=0.022 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCC--CCCCChHHHHHHHHHH
Q psy12401 148 NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISI--FQPRSDGVDNFIASLI 204 (255)
Q Consensus 148 ~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~--~~~~sDg~~NL~~Av~ 204 (255)
++||+|+.-...+-++ .+..+. . .+|||+.+...+. .....|-..--..|+.
T Consensus 71 ~vdgiI~~~~~~~~~~---~~~~l~-~-~iPvV~i~~~~~~~~~~V~~D~~~~g~~a~~ 124 (303)
T 3kke_A 71 RVDGVLLQRREDFDDD---MLAAVL-E-GVPAVTINSRVPGRVGSVILDDQKGGGIATE 124 (303)
T ss_dssp SSSEEEECCCTTCCHH---HHHHHH-T-TSCEEEESCCCTTCCCEEEECHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcHH---HHHHHh-C-CCCEEEECCcCCCCCCEEEECcHHHHHHHHH
Confidence 4999999754444221 344433 5 8999999987764 2233444444444443
No 88
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=26.81 E-value=85 Score=26.94 Aligned_cols=38 Identities=13% Similarity=0.232 Sum_probs=25.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCC
Q psy12401 148 NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIF 189 (255)
Q Consensus 148 ~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~ 189 (255)
++|||||. +.+.. ...++.. +...++|||+.+...+..
T Consensus 62 ~vDgiIi~-~~~~~--~~~~~~~-~~~~giPvV~~~~~~~~~ 99 (350)
T 3h75_A 62 KPDYLMLV-NEQYV--APQILRL-SQGSGIKLFIVNSPLTLD 99 (350)
T ss_dssp CCSEEEEE-CCSSH--HHHHHHH-HTTSCCEEEEEESCCCTT
T ss_pred CCCEEEEe-Cchhh--HHHHHHH-HHhCCCcEEEEcCCCChH
Confidence 58999997 43322 2334454 346789999999877654
No 89
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=26.71 E-value=75 Score=26.23 Aligned_cols=27 Identities=19% Similarity=0.263 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHhhc--CCCeEEEEcCC
Q psy12401 132 VDDWINIASDVFDNYE--NFDGFVILHGT 158 (255)
Q Consensus 132 ~~d~~~La~~I~~~~~--~~dG~VVtHGT 158 (255)
++|...|.+.+++.++ ++|=||+|=||
T Consensus 60 ~Dd~~~I~~al~~a~~~~~~DlVIttGGt 88 (189)
T 1jlj_A 60 PDEIEEIKETLIDWCDEKELNLILTTGGT 88 (189)
T ss_dssp CSCHHHHHHHHHHHHHTSCCSEEEEESCC
T ss_pred CCCHHHHHHHHHHHhhcCCCCEEEEcCCC
Confidence 5667888888888876 68988888888
No 90
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=26.61 E-value=1.6e+02 Score=24.92 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCc
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGTD 159 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGTD 159 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|..
T Consensus 22 Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g 54 (254)
T 3gow_A 22 NAITGELLDALYAALKEGEEDREVRALLLTGAG 54 (254)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC
Confidence 568999999999999887654 33555555654
No 91
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=26.43 E-value=39 Score=27.64 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 136 INIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 136 ~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
-+|.++|++...++|||||-=|-=|- |..+|-=.+...++|+|
T Consensus 56 geLId~Ih~a~~~~dgiiINpgA~TH--tSvAlrDAl~~v~~P~V 98 (146)
T 1h05_A 56 AQLLDWIHQAADAAEPVILNAGGLTH--TSVALRDACAELSAPLI 98 (146)
T ss_dssp HHHHHHHHHHHHHTCCEEEECGGGGG--TCHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHhhhcCcEEEECchhhcc--ccHHHHHHHHhCCCCEE
Confidence 46778888887679999998885552 33344334567889988
No 92
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=26.11 E-value=1.1e+02 Score=26.17 Aligned_cols=32 Identities=19% Similarity=0.199 Sum_probs=22.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 127 SSNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
---++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 26 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 58 (266)
T 3fdu_A 26 KNALYGELYLWIAKALDEADQNKDVRVVVLRGA 58 (266)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEES
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECC
Confidence 3568999999999999887644 2344455555
No 93
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=26.09 E-value=51 Score=31.61 Aligned_cols=49 Identities=10% Similarity=-0.016 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhhcC--CCeEEE--EcC----CchHHHHHHHHHhhhcCC--CceEEEc
Q psy12401 134 DWINIASDVFDNYEN--FDGFVI--LHG----TDTLCYTAAALSFMFENL--GKTVIIT 182 (255)
Q Consensus 134 d~~~La~~I~~~~~~--~dG~VV--tHG----TDTLeeTA~~Lsl~l~~~--~kPVVlT 182 (255)
+.....+.++..+++ +|+++| +|| +|.-+++|-.+.-..... .||+|++
T Consensus 312 d~~~~~~al~~~l~D~~vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v 370 (480)
T 3dmy_A 312 DPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAI 370 (480)
T ss_dssp CCHHHHHHHHHGGGCTTEEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEE
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEEE
Confidence 334456677777754 898888 654 343366777665544444 6996544
No 94
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=26.03 E-value=76 Score=25.48 Aligned_cols=43 Identities=16% Similarity=0.023 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhcCCCeEEEEcC---CchHHHHHHHHHhhhcCCCceEEEc
Q psy12401 135 WINIASDVFDNYENFDGFVILHG---TDTLCYTAAALSFMFENLGKTVIIT 182 (255)
Q Consensus 135 ~~~La~~I~~~~~~~dG~VVtHG---TDTLeeTA~~Lsl~l~~~~kPVVlT 182 (255)
|..+.+.=.+.+.++|.||+.-+ ..|.-|.+|+.. +.||||+-
T Consensus 64 ~~~i~~~d~~~i~~aD~vva~~~~~d~Gt~~EiGyA~a-----lgKPVi~l 109 (165)
T 2khz_A 64 DQFIHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVA-----LGKPILCL 109 (165)
T ss_dssp HHHHHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHH-----TCSSEEEE
T ss_pred HHHHHHHHHHHHHhCCEEEEECCCCCCCHHHHHHHHHH-----CCCEEEEE
Confidence 55565555566777999998863 345555555543 58999975
No 95
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=25.79 E-value=27 Score=31.42 Aligned_cols=52 Identities=17% Similarity=0.254 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCC
Q psy12401 133 DDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQIS 187 (255)
Q Consensus 133 ~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP 187 (255)
.+..++++.+.+.+ +.+++|||| .|.-+....+|+.+ ....+||.+.|--.-
T Consensus 255 ~~~~~~~~~~~~~~-~it~iilTK-lD~~a~~G~~l~~~-~~~~~pi~~i~~Ge~ 306 (328)
T 3e70_C 255 NAIVEQARQFNEAV-KIDGIILTK-LDADARGGAALSIS-YVIDAPILFVGVGQG 306 (328)
T ss_dssp THHHHHHHHHHHHS-CCCEEEEEC-GGGCSCCHHHHHHH-HHHTCCEEEEECSSS
T ss_pred HHHHHHHHHHHHhc-CCCEEEEeC-cCCccchhHHHHHH-HHHCCCEEEEeCCCC
Confidence 35555555555443 478999999 34323344566653 355789887764433
No 96
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=25.66 E-value=99 Score=27.22 Aligned_cols=29 Identities=17% Similarity=0.485 Sum_probs=20.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCeEEEEcC
Q psy12401 127 SSNMTVDDWINIASDVFDNYENFDGFVILHG 157 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~~dG~VVtHG 157 (255)
|.+++.++..++++.+++. .+|+|+|+-+
T Consensus 219 ~~~~~~~~~~~~a~~l~~~--Gvd~i~vsn~ 247 (336)
T 1f76_A 219 APDLSEEELIQVADSLVRH--NIDGVIATNT 247 (336)
T ss_dssp CSCCCHHHHHHHHHHHHHT--TCSEEEECCC
T ss_pred cCCCCHHHHHHHHHHHHHc--CCcEEEEeCC
Confidence 5667777877777766654 4788877644
No 97
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=25.55 E-value=25 Score=34.05 Aligned_cols=67 Identities=16% Similarity=0.219 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCCCCChHHHHHHHH
Q psy12401 133 DDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQPRSDGVDNFIAS 202 (255)
Q Consensus 133 ~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 202 (255)
.+.+.+++.+.+.+ ..+|||||| -|.-...+.+|+++ ..+++||++.|--.-.++...=-+..+..+
T Consensus 425 q~al~~ak~f~~~~-~itgvIlTK-LD~takgG~~lsi~-~~~~~PI~fig~Ge~vdDL~~f~~~~~v~~ 491 (503)
T 2yhs_A 425 QNAVSQAKLFHEAV-GLTGITLTK-LDGTAKGGVIFSVA-DQFGIPIRYIGVGERIEDLRPFKADDFIEA 491 (503)
T ss_dssp HHHHHHHHHHHHHT-CCSEEEEEC-GGGCSCCTHHHHHH-HHHCCCEEEEECSSSGGGEEECCHHHHHHH
T ss_pred HHHHHHHHHHHhhc-CCCEEEEEc-CCCcccccHHHHHH-HHHCCCEEEEecCCChhhcccCCHHHHHHH
Confidence 34445555555544 478899998 34333445566653 345688888665443344333333334333
No 98
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=25.53 E-value=1.7e+02 Score=25.44 Aligned_cols=31 Identities=10% Similarity=-0.005 Sum_probs=22.4
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 48 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 79 (286)
T 3myb_A 48 NALSEAMLAALGEAFGTLAEDESVRAVVLAAS 79 (286)
T ss_dssp TCBCHHHHHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCeEEEEEECC
Confidence 468999999999999887654 2345555554
No 99
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=25.02 E-value=1.1e+02 Score=26.39 Aligned_cols=31 Identities=10% Similarity=-0.054 Sum_probs=21.4
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
--++++.|.+|.+.+++.-.+ --.+||+.|.
T Consensus 35 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 66 (272)
T 3qk8_A 35 NSVGPQMHRDLADVWPVIDRDPDVRVVLVRGE 66 (272)
T ss_dssp HEECHHHHHHHHHHHHHHHHCTTCSEEEEEES
T ss_pred CCCCHHHHHHHHHHHHHHhhCCCceEEEEECC
Confidence 357899999999999877644 2244445455
No 100
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=25.00 E-value=2.4e+02 Score=23.26 Aligned_cols=53 Identities=11% Similarity=0.120 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCC
Q psy12401 131 TVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISI 188 (255)
Q Consensus 131 t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~ 188 (255)
.++...+..+.+.+ .++|||||.. ++.-+. ...+.. +...++|||+.+...+.
T Consensus 46 ~~~~~~~~i~~l~~--~~vdgiii~~-~~~~~~-~~~~~~-~~~~giPvV~~~~~~~~ 98 (297)
T 3rot_A 46 DVPKQVQFIESALA--TYPSGIATTI-PSDTAF-SKSLQR-ANKLNIPVIAVDTRPKD 98 (297)
T ss_dssp CHHHHHHHHHHHHH--TCCSEEEECC-CCSSTT-HHHHHH-HHHHTCCEEEESCCCSC
T ss_pred CHHHHHHHHHHHHH--cCCCEEEEeC-CCHHHH-HHHHHH-HHHCCCCEEEEcCCCcc
Confidence 45555444433322 2489999863 333211 122333 22457899999987665
No 101
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=24.84 E-value=2e+02 Score=24.99 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=23.4
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCc
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGTD 159 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGTD 159 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|..
T Consensus 46 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G 78 (290)
T 3sll_A 46 NAMAFDVMLPFKQMLVDISHDNDVRAVVITGAG 78 (290)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCTTCCEEEEEEST
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCC
Confidence 568999999999999887654 23555566664
No 102
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=24.72 E-value=53 Score=27.42 Aligned_cols=43 Identities=16% Similarity=0.060 Sum_probs=29.4
Q ss_pred HHHHHHHHHhh-cCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEE
Q psy12401 136 INIASDVFDNY-ENFDGFVILHGTDTLCYTAAALSFMFENLGKTVI 180 (255)
Q Consensus 136 ~~La~~I~~~~-~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVV 180 (255)
-+|.++|++.. .++|||||-=|-=|- |.++|-=.|...++|+|
T Consensus 70 GeLId~Ih~A~~~~~dgIIINpgAyTH--tSvAlrDAL~~v~~P~V 113 (167)
T 3kip_A 70 GFIIDRIHEAKRQGVGFVVINAGAYTH--TSVGIRDALLGTAIPFI 113 (167)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECGGGGG--TCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhhhcCccEEEEcccccee--ccHHHHHHHHhcCCCEE
Confidence 46778888887 679999998886552 23333323446788988
No 103
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=24.38 E-value=2.2e+02 Score=24.42 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=22.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 127 SSNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
...++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 45 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 77 (263)
T 2j5g_A 45 SLVFTGKTHREFPDAFYDISRDRDNRVVILTGS 77 (263)
T ss_dssp SCEECHHHHHHHHHHHHHHHHCTTCCEEEEECB
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECC
Confidence 3468899999999999887644 2355555564
No 104
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=24.31 E-value=87 Score=26.04 Aligned_cols=51 Identities=10% Similarity=0.118 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCCCC---CCChHHHHHHHHHH
Q psy12401 148 NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISIFQ---PRSDGVDNFIASLI 204 (255)
Q Consensus 148 ~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~~~---~~sDg~~NL~~Av~ 204 (255)
++||+|+.-...+- ..+.. +.. .+|||+.+...+... ...|-..--+.|+.
T Consensus 66 ~vdgiIi~~~~~~~----~~~~~-~~~-~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~ 119 (289)
T 3k9c_A 66 RCEAAILLGTRFDT----DELGA-LAD-RVPALVVARASGLPGVGAVRGDDVAGITLAVD 119 (289)
T ss_dssp TEEEEEEETCCCCH----HHHHH-HHT-TSCEEEESSCCSSTTSEEEEECHHHHHHHHHH
T ss_pred CCCEEEEECCCCCH----HHHHH-HHc-CCCEEEEcCCCCCCCCCEEEeChHHHHHHHHH
Confidence 48999998544332 23444 334 899999998765332 23344444444443
No 105
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=24.17 E-value=88 Score=26.62 Aligned_cols=31 Identities=16% Similarity=0.240 Sum_probs=22.5
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 28 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 59 (256)
T 3qmj_A 28 NAFNEALYDATAQALLDAADDPQVAVVLLTGS 59 (256)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEES
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEECC
Confidence 568999999999999887644 2345555554
No 106
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A*
Probab=23.57 E-value=1.1e+02 Score=27.35 Aligned_cols=59 Identities=17% Similarity=0.127 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHH----HHHHhhhcCCCceEEEcCCCCCCC
Q psy12401 129 NMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTA----AALSFMFENLGKTVIITGSQISIF 189 (255)
Q Consensus 129 ~~t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA----~~Lsl~l~~~~kPVVlTGAmrP~~ 189 (255)
|...+|.++|.-.+..---+.-||.+++|--+++.++ .+|.+ +...++|| .-|+.+|+.
T Consensus 21 D~GiDDa~AL~~al~~p~i~l~gIttv~GN~~~~~~~~Na~~ll~~-~g~~dIPV-~~Ga~~Pl~ 83 (322)
T 1yoe_A 21 DPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTL-LNRTDIPV-AGGAVKPLM 83 (322)
T ss_dssp CCSHHHHHHHHHHHTCTTEEEEEEEECSSSSCHHHHHHHHHHHHHH-TTCTTSCE-EECCSSCSS
T ss_pred CCCHHHHHHHHHHHhCCCCEEEEEEEcCCCCCHHHHHHHHHHHHHH-cCCCCCCE-EeCCCcccc
Confidence 3457888888776553211356999999998888864 34444 33346785 678888864
No 107
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=23.17 E-value=2e+02 Score=24.56 Aligned_cols=32 Identities=28% Similarity=0.116 Sum_probs=22.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 127 SSNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
...++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 37 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 69 (257)
T 1szo_A 37 SLVWTSTAHDELAYCFHDIACDRENKVVILTGT 69 (257)
T ss_dssp SCEECHHHHHHHHHHHHHHHHCTTCCEEEEECB
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcC
Confidence 3458899999999999887644 2345555564
No 108
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=23.17 E-value=1.2e+02 Score=25.10 Aligned_cols=51 Identities=10% Similarity=0.152 Sum_probs=30.9
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCC
Q psy12401 131 TVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISI 188 (255)
Q Consensus 131 t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~ 188 (255)
.++...++.+.+.+ ..+||||+. +++. ....+.. +....+|||+.+...+.
T Consensus 49 ~~~~~~~~~~~l~~--~~vdgiIi~-~~~~---~~~~~~~-~~~~~iPvV~~~~~~~~ 99 (291)
T 3egc_A 49 DIVREREAVGQFFE--RRVDGLILA-PSEG---EHDYLRT-ELPKTFPIVAVNRELRI 99 (291)
T ss_dssp CHHHHHHHHHHHHH--TTCSEEEEC-CCSS---CCHHHHH-SSCTTSCEEEESSCCCC
T ss_pred CHHHHHHHHHHHHH--CCCCEEEEe-CCCC---ChHHHHH-hhccCCCEEEEecccCC
Confidence 45555444444432 248999876 4443 2234444 34678999999988764
No 109
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=23.16 E-value=1.7e+02 Score=25.15 Aligned_cols=30 Identities=7% Similarity=0.014 Sum_probs=21.5
Q ss_pred CCCCHHHHHHHHHHHHHhhcC--CCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYEN--FDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~--~dG~VVtHGT 158 (255)
--++++.+.+|.+.+++.-.+ +..||++ |.
T Consensus 34 Nal~~~~~~~L~~al~~~~~d~~vr~vVlt-g~ 65 (272)
T 1hzd_A 34 NSLSKNLIKMLSKAVDALKSDKKVRTIIIR-SE 65 (272)
T ss_dssp TCBCTTHHHHHHHHHHHHHHCSSCSEEEEE-ES
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCeEEEEEe-cC
Confidence 467889999999999887644 4555555 53
No 110
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=22.76 E-value=1.4e+02 Score=25.47 Aligned_cols=31 Identities=10% Similarity=0.073 Sum_probs=22.6
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
--++++.+.+|.+.+++.-.+ --.+||++|.
T Consensus 32 Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~ 63 (263)
T 3moy_A 32 NALNQTLEAEVLDAARDFDADLEIGAIVVTGS 63 (263)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEECC
Confidence 568999999999999887644 2345555565
No 111
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=22.26 E-value=1.4e+02 Score=24.18 Aligned_cols=55 Identities=11% Similarity=-0.168 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCCC-CCCCChHHHHHHHHHHHHh
Q psy12401 148 NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQISI-FQPRSDGVDNFIASLILAG 207 (255)
Q Consensus 148 ~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP~-~~~~sDg~~NL~~Av~~A~ 207 (255)
++||+|+.....+- ..+.. +...++|||+.+...+. .....|-..--..|+....
T Consensus 55 ~vdgiI~~~~~~~~----~~~~~-~~~~~iPvV~~~~~~~~~~~V~~d~~~~~~~a~~~L~ 110 (276)
T 2h0a_A 55 LTDGLILASYDLTE----RFEEG-RLPTERPVVLVDAQNPRYDSVYLDNRLGGRLAGAYLA 110 (276)
T ss_dssp CCSEEEEESCCCC-----------CCSCSSCEEEESSCCTTSEEEEECSHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCCH----HHHHH-HhhcCCCEEEEeccCCCCCEEEEccHHHHHHHHHHHH
Confidence 48999987554442 23444 34568999998875441 1223444444444444443
No 112
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=22.25 E-value=2e+02 Score=24.44 Aligned_cols=40 Identities=15% Similarity=-0.046 Sum_probs=25.8
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 118 VLEYDSLLDSSNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 118 v~e~~~~~dSs~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
++.+.+.. ---++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 23 ~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 63 (264)
T 1wz8_A 23 EITFRGEK-LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGE 63 (264)
T ss_dssp EEEECCSG-GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEG
T ss_pred EEEeCCCC-cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECC
Confidence 34444323 4568999999999999887654 2245555554
No 113
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=21.81 E-value=2e+02 Score=25.31 Aligned_cols=45 Identities=18% Similarity=0.158 Sum_probs=30.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhc-CCCeEEEE----cCCchHHHHHHHHH
Q psy12401 125 LDSSNMTVDDWINIASDVFDNYE-NFDGFVIL----HGTDTLCYTAAALS 169 (255)
Q Consensus 125 ~dSs~~t~~d~~~La~~I~~~~~-~~dG~VVt----HGTDTLeeTA~~Ls 169 (255)
-.+--++..+...+.+.|+...+ .+||||+= .|+==++-+..++.
T Consensus 62 ~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~ 111 (256)
T 1twd_A 62 GGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMA 111 (256)
T ss_dssp SSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHH
Confidence 35677889999999999987765 48999972 34333344444444
No 114
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=21.65 E-value=2.1e+02 Score=24.35 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=22.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 127 SSNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
---++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 24 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 56 (269)
T 1nzy_A 24 RNALSVKAMQEVTDALNRAEEDDSVGAVMITGA 56 (269)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEES
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECC
Confidence 3568999999999999887644 2245555564
No 115
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=21.54 E-value=1.4e+02 Score=25.92 Aligned_cols=30 Identities=13% Similarity=0.108 Sum_probs=21.4
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYENFDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~~dG~VVtHGT 158 (255)
--++++.+.+|.+.+++. ++--.+||+.|.
T Consensus 38 Nal~~~~~~~L~~al~~~-d~~vr~vVltg~ 67 (275)
T 3hin_A 38 NALNDGLMAALKDCLTDI-PDQIRAVVIHGI 67 (275)
T ss_dssp TCBCHHHHHHHHHHTSSC-CTTCCEEEEEES
T ss_pred CCCCHHHHHHHHHHHHHh-CcCceEEEEECC
Confidence 458999999999988776 433345555565
No 116
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=21.54 E-value=3.4e+02 Score=24.80 Aligned_cols=46 Identities=11% Similarity=-0.049 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhc-CCCeEEEEcCCc-----hHHHHHHHHHhhhc--CCCceEEE
Q psy12401 136 INIASDVFDNYE-NFDGFVILHGTD-----TLCYTAAALSFMFE--NLGKTVII 181 (255)
Q Consensus 136 ~~La~~I~~~~~-~~dG~VVtHGTD-----TLeeTA~~Lsl~l~--~~~kPVVl 181 (255)
..+.+.|+..++ .++|++|.=.|. |.+|=..++..+.+ +...|||.
T Consensus 80 ~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 80 EAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 333344444443 377777743333 55666555555443 34567665
No 117
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=21.53 E-value=1.3e+02 Score=24.90 Aligned_cols=52 Identities=6% Similarity=-0.009 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCC
Q psy12401 131 TVDDWINIASDVFDNYENFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQIS 187 (255)
Q Consensus 131 t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP 187 (255)
.++...++.+.+.+ .++||||+.-...+. ....+.. +....+|||+.+...+
T Consensus 44 ~~~~~~~~~~~~~~--~~vdgiii~~~~~~~--~~~~~~~-~~~~~iPvV~~~~~~~ 95 (309)
T 2fvy_A 44 DQSKQNDQIDVLLA--KGVKALAINLVDPAA--AGTVIEK-ARGQNVPVVFFNKEPS 95 (309)
T ss_dssp CHHHHHHHHHHHHH--TTCSEEEECCSSGGG--HHHHHHH-HHTTTCCEEEESSCCC
T ss_pred CHHHHHHHHHHHHH--cCCCEEEEeCCCcch--hHHHHHH-HHHCCCcEEEecCCCC
Confidence 44444444333322 248999886433321 1223444 2356899999987543
No 118
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=21.11 E-value=2.5e+02 Score=23.60 Aligned_cols=31 Identities=10% Similarity=0.161 Sum_probs=22.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhcC--CCeEEEEcCC
Q psy12401 127 SSNMTVDDWINIASDVFDNYEN--FDGFVILHGT 158 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~--~dG~VVtHGT 158 (255)
---++++.+.+|.+.+++.-.+ +..||+ .|.
T Consensus 20 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVl-tg~ 52 (253)
T 1uiy_A 20 RNPLSPEMALSLLQALDDLEADPGVRAVVL-TGR 52 (253)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHCTTCCEEEE-EES
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEE-ECC
Confidence 3568999999999999887644 445555 454
No 119
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=20.99 E-value=2.1e+02 Score=24.66 Aligned_cols=31 Identities=10% Similarity=0.078 Sum_probs=22.2
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 50 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~ 81 (276)
T 3rrv_A 50 NSVNDDLHVGLARLWQRLTDDPTARAAVITGA 81 (276)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEES
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEECC
Confidence 458999999999999887644 2345555554
No 120
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=20.98 E-value=1.8e+02 Score=24.55 Aligned_cols=43 Identities=16% Similarity=0.185 Sum_probs=26.1
Q ss_pred HHHHHhhc-CCCeEEEEcCCchHHHHHHHHHhhhcCCCceEEEcCCCCC
Q psy12401 140 SDVFDNYE-NFDGFVILHGTDTLCYTAAALSFMFENLGKTVIITGSQIS 187 (255)
Q Consensus 140 ~~I~~~~~-~~dG~VVtHGTDTLeeTA~~Lsl~l~~~~kPVVlTGAmrP 187 (255)
+.++.... ++||+|+.-...+- ..+.. +...++|||+.+...+
T Consensus 107 ~~~~~l~~~~vdgiI~~~~~~~~----~~~~~-l~~~~iPvV~~~~~~~ 150 (332)
T 2hsg_A 107 HLLNNMLGKQVDGIIFMSGNVTE----EHVEE-LKKSPVPVVLAASIES 150 (332)
T ss_dssp HHHHHTSCCSSCCEEECCSSCCH----HHHHH-HTTSSSCEEEESCCCS
T ss_pred HHHHHHHhCCCcEEEEecCCCCH----HHHHH-HHhCCCCEEEEccccC
Confidence 34444443 49999987543332 23444 3356899999987654
No 121
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=20.72 E-value=1.5e+02 Score=26.70 Aligned_cols=31 Identities=16% Similarity=0.093 Sum_probs=21.9
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCC
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGT 158 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGT 158 (255)
--++++.+.+|.+.+++.-.+ --.+||+.|.
T Consensus 31 NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~ 62 (353)
T 4hdt_A 31 NSLTHGMVTTMAERLAAWENDDSVRAVLLTGA 62 (353)
T ss_dssp TCBCHHHHHHHHHHHHHHHTCTTCCEEEEEES
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEEeC
Confidence 358999999999999887654 2244444454
No 122
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=20.61 E-value=1.4e+02 Score=25.59 Aligned_cols=32 Identities=13% Similarity=0.003 Sum_probs=22.9
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCeEEEEcCCc
Q psy12401 128 SNMTVDDWINIASDVFDNYEN-FDGFVILHGTD 159 (255)
Q Consensus 128 s~~t~~d~~~La~~I~~~~~~-~dG~VVtHGTD 159 (255)
--++.+.+.+|.+.+++.-.+ --.+||+.|..
T Consensus 31 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g 63 (265)
T 3rsi_A 31 NALSTNMVSQFAAAWDEIDHDDGIRAAILTGAG 63 (265)
T ss_dssp TCCCHHHHHHHHHHHHHHHHCTTCCEEEEEEST
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC
Confidence 458999999999999887644 23455555654
No 123
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=20.28 E-value=2.4e+02 Score=24.29 Aligned_cols=81 Identities=15% Similarity=0.071 Sum_probs=49.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhc-CCCeEEE----EcCCchHHHHHHHHHhh-------------------------hcC
Q psy12401 125 LDSSNMTVDDWINIASDVFDNYE-NFDGFVI----LHGTDTLCYTAAALSFM-------------------------FEN 174 (255)
Q Consensus 125 ~dSs~~t~~d~~~La~~I~~~~~-~~dG~VV----tHGTDTLeeTA~~Lsl~-------------------------l~~ 174 (255)
-.+--++..+...+.+.|+...+ .+||||+ -.|+=-++-+..++... |..
T Consensus 65 ~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~ 144 (224)
T 2bdq_A 65 GGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVA 144 (224)
T ss_dssp SSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHH
Confidence 35677899999999999987765 4899998 23432233333333221 113
Q ss_pred CCceEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q psy12401 175 LGKTVIITGSQISIFQPRSDGVDNFIASLILA 206 (255)
Q Consensus 175 ~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A 206 (255)
+..-=|||.-+.+. .+-.||...|..=+..|
T Consensus 145 lGv~rILTSG~~~~-~~a~~g~~~L~~Lv~~a 175 (224)
T 2bdq_A 145 LGFTRILLHGSSNG-EPIIENIKHIKALVEYA 175 (224)
T ss_dssp TTCCEEEECSCSSC-CCGGGGHHHHHHHHHHH
T ss_pred cCCCEEECCCCCCC-CcHHHHHHHHHHHHHhh
Confidence 44455666665554 34577888886655544
No 124
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=20.23 E-value=1.7e+02 Score=24.91 Aligned_cols=31 Identities=10% Similarity=-0.064 Sum_probs=22.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCeEEEEcC
Q psy12401 127 SSNMTVDDWINIASDVFDNYENFDGFVILHG 157 (255)
Q Consensus 127 Ss~~t~~d~~~La~~I~~~~~~~dG~VVtHG 157 (255)
---++++.+.+|.+.+++.-.+--.+||+.|
T Consensus 25 ~Nal~~~~~~~L~~al~~~~~d~vr~vVltg 55 (261)
T 1ef8_A 25 LNALSKVFIDDLMQALSDLNRPEIRCIILRA 55 (261)
T ss_dssp TTCCCHHHHHHHHHHHHHTCSTTCCEEEEEC
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCceEEEEEC
Confidence 3568999999999999877543145666667
No 125
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A*
Probab=20.15 E-value=1.9e+02 Score=25.52 Aligned_cols=58 Identities=22% Similarity=0.173 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCeEEEEcCCchHHHHH----HHHHhhhcCCCceEEEcCCCCCCC
Q psy12401 129 NMTVDDWINIASDVFDNYENFDGFVILHGTDTLCYTA----AALSFMFENLGKTVIITGSQISIF 189 (255)
Q Consensus 129 ~~t~~d~~~La~~I~~~~~~~dG~VVtHGTDTLeeTA----~~Lsl~l~~~~kPVVlTGAmrP~~ 189 (255)
|...+|..+|+-.+..---+.-||.+++|--+++.++ .+|.+ ...++|| .-|+.+|+.
T Consensus 11 D~GiDDa~Al~~al~~p~i~l~gIt~v~GN~~~~~~~~na~~ll~~--g~~dIPV-~~Ga~~pl~ 72 (313)
T 1q8f_A 11 DPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQK--LEINVPV-YAGMPQPIM 72 (313)
T ss_dssp CCCHHHHHHHHHHHHCTTEEEEEEEECSSSSCHHHHHHHHHHHHHH--TTCCCCE-EECCSSCSS
T ss_pred CCChHHHHHHHHHHhCCCCEEEEEEEccCCCCHHHHHHHHHHHHHc--CCCCCCE-EeCCCcccc
Confidence 3458999999876654211367999999999888653 33333 2235775 558888864
Done!