Your job contains 1 sequence.
>psy12410
MVRSRRKRSRSRSPSPSHKRPKESRRDKDRDRRRRSRSHERRSERDRDRDLERRKEKSRG
SKRRSRSREAERSKDHSKKEEKDKREKEEEEAAFDPSKLDKEVEATRLELEMQKRRDRIE
RWRAERKKKDIETIKKDIKSNLSSGLGGSAPMKKWNLEDDSDEDENDNKDENGKTAEEDI
DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME
ENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMT
PEEVEKYKEELEGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAI
MSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAK
KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI
VLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGR
SVVCKEVEQHVIVLDEEQKMLKLLELLGIYQDQGSVIVFVDKQENADSLLFHSMDPCLEF
LPLPAGITRFIWQWA
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12410
(615 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030631 - symbol:CG6227 species:7227 "Drosophila m... 1470 1.0e-152 2
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 1435 6.4e-147 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 1424 9.3e-146 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 1409 3.6e-144 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 1409 3.6e-144 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 1409 3.6e-144 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 1404 1.2e-143 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 1403 1.6e-143 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 1403 1.6e-143 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 1401 2.6e-143 1
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 1132 3.3e-117 2
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 1092 1.4e-110 1
TAIR|locus:2074899 - symbol:AT3G09620 species:3702 "Arabi... 1064 1.3e-107 1
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 1028 9.2e-107 2
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 998 1.0e-105 3
DICTYBASE|DDB_G0275443 - symbol:helB1 "putative RNA splic... 994 5.2e-102 2
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 952 1.4e-99 2
UNIPROTKB|D6RJA6 - symbol:DDX46 "Probable ATP-dependent R... 929 2.7e-93 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 833 3.9e-83 1
CGD|CAL0005725 - symbol:PRP5 species:5476 "Candida albica... 823 4.5e-82 1
UNIPROTKB|Q5ADL0 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 823 4.5e-82 1
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 752 8.5e-77 2
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 752 8.5e-77 2
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 752 8.5e-77 2
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 771 1.5e-76 1
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 766 5.0e-76 1
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 765 6.3e-76 1
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 765 6.3e-76 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 757 4.5e-75 1
GENEDB_PFALCIPARUM|PFE0430w - symbol:PFE0430w "ATP-depend... 765 8.6e-75 1
UNIPROTKB|Q8I416 - symbol:PFE0430w "ATP-dependent RNA Hel... 765 8.6e-75 1
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 753 1.2e-74 1
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 753 1.2e-74 1
SGD|S000000441 - symbol:PRP5 "RNA helicase in the DEAD-bo... 726 1.8e-74 2
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 749 3.1e-74 1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 708 7.0e-70 1
WB|WBGene00008119 - symbol:C46F11.4 species:6239 "Caenorh... 707 8.9e-70 1
UNIPROTKB|F1RSJ7 - symbol:DDX42 "Uncharacterized protein"... 680 6.5e-67 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 672 4.5e-66 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 668 1.2e-65 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 661 6.7e-65 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 659 1.1e-64 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 659 1.1e-64 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 656 2.3e-64 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 654 3.7e-64 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 642 6.9e-63 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 637 2.3e-62 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 637 2.3e-62 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 636 3.0e-62 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 633 6.2e-62 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 633 6.2e-62 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 633 6.2e-62 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 633 6.2e-62 1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 633 6.2e-62 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 633 6.2e-62 1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 633 6.2e-62 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 633 6.2e-62 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 632 7.9e-62 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 627 2.7e-61 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 619 1.9e-60 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 619 1.9e-60 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 619 1.9e-60 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 619 1.9e-60 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 619 1.9e-60 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 619 1.9e-60 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 619 1.9e-60 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 619 1.9e-60 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 619 1.9e-60 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 615 5.0e-60 1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 612 1.0e-59 1
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 612 1.0e-59 1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 606 4.5e-59 1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 576 3.3e-55 1
DICTYBASE|DDB_G0277857 - symbol:helB2 "putative U5 small ... 482 1.9e-54 3
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 559 4.3e-54 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 555 1.1e-53 1
UNIPROTKB|Q9NXZ2 - symbol:DDX43 "Probable ATP-dependent R... 554 1.5e-53 1
ASPGD|ASPL0000051195 - symbol:AN1634 species:162425 "Emer... 479 1.2e-52 2
GENEDB_PFALCIPARUM|PFE0925c - symbol:PFE0925c "snrnp prot... 463 1.1e-51 3
UNIPROTKB|Q8I0W7 - symbol:PFE0925c "Snrnp protein, putati... 463 1.1e-51 3
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p... 536 1.2e-51 1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein... 536 1.2e-51 1
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 526 1.3e-50 1
ZFIN|ZDB-GENE-080204-77 - symbol:ddx43 "DEAD (Asp-Glu-Ala... 526 1.3e-50 1
UNIPROTKB|E1BII7 - symbol:DDX43 "Uncharacterized protein"... 523 2.8e-50 1
UNIPROTKB|F1NVJ6 - symbol:DDX43 "Uncharacterized protein"... 518 9.5e-50 1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 513 3.2e-49 1
UNIPROTKB|G3MYF0 - symbol:LOC100300937 "Uncharacterized p... 511 5.2e-49 1
UNIPROTKB|F1NQ09 - symbol:DDX43 "Uncharacterized protein"... 510 6.7e-49 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 510 6.7e-49 1
UNIPROTKB|F1S0I6 - symbol:DDX43 "Uncharacterized protein"... 506 1.8e-48 1
FB|FBgn0032690 - symbol:CG10333 species:7227 "Drosophila ... 487 7.5e-48 2
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas... 498 1.2e-47 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 492 5.4e-47 1
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 490 8.8e-47 1
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 489 1.1e-46 1
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 489 1.1e-46 1
UNIPROTKB|Q86TM3 - symbol:DDX53 "Probable ATP-dependent R... 488 1.4e-46 1
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 486 2.3e-46 1
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 486 2.3e-46 1
WARNING: Descriptions of 776 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 1470 (522.5 bits), Expect = 1.0e-152, Sum P(2) = 1.0e-152
Identities = 292/434 (67%), Positives = 335/434 (77%)
Query: 177 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAKG 236
E++IDPLDA+MQ V+ EMR+VN P PA S KG
Sbjct: 370 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS---QGVVILTGVAKKKTTTLKKG 420
Query: 237 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 296
E++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE+
Sbjct: 421 EVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPEL 480
Query: 297 ARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQA 356
RMT GI+VKGKGCP+PIKTWAQCGVSKK ++ L++ +EKPTPIQ QA
Sbjct: 481 TRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQA 540
Query: 357 IPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIG 416
IPAIMSGRDLIGIAKTGSGKT+AF+LP+ RHILDQP +E+ DG +AIIM+PTRELCMQIG
Sbjct: 541 IPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIG 600
Query: 417 KEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 476
K+ +KF+KSLGLR VCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR
Sbjct: 601 KDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 660
Query: 477 VTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQ 536
VTY+VLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRIL KPIE+
Sbjct: 661 VTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVI 720
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFHSMDP 596
VGGRSVVCKEVEQHV++ GIYQ+ GS+IVFVDKQENAD LL M
Sbjct: 721 VGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKA 780
Query: 597 CLEFLPLPAGITRF 610
+ L GI +F
Sbjct: 781 SYPCMSLHGGIDQF 794
Score = 41 (19.5 bits), Expect = 1.0e-152, Sum P(2) = 1.0e-152
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 98 KLDKEVEATRLELEMQK 114
++DKE + RLE EM K
Sbjct: 180 EIDKEEQQRRLEQEMIK 196
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 1435 (510.2 bits), Expect = 6.4e-147, P = 6.4e-147
Identities = 282/433 (65%), Positives = 330/433 (76%)
Query: 178 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAKGE 237
E++DPLDA+M+ V EE++K N + D K S +K K KGE
Sbjct: 211 EEVDPLDAYMEEVKEEVKKFNMGTMKGANDKKGGMSVTKVVTVVKTKKMPHAT--KKKGE 268
Query: 238 LMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIA 297
LME +QD +EYSSEEE+ DL + +KQ+K L VDH I+Y PFRK+FYVEVPE+A
Sbjct: 269 LMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFRKNFYVEVPELA 328
Query: 298 RMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAI 357
RM+P GI VKGKGCP+PIKTW QCG+S K+L+ALKK NYEKPTPIQAQAI
Sbjct: 329 RMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAI 388
Query: 358 PAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGK 417
PAIMSGRDLIGIAKTGSGKT+AF+LP+ RHILDQ P+ E +GP+A+IM+PTREL +QI K
Sbjct: 389 PAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMTPTRELALQITK 448
Query: 418 EAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRV 477
E KKF+KSL LRVVCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDML AN+GRVTNLRRV
Sbjct: 449 ECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRV 508
Query: 478 TYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQV 537
TY+V+DEADRMFDMGFEPQVMRI+DNVRPDRQTVMFSATFPR MEALARRIL+KP+E+QV
Sbjct: 509 TYVVIDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQV 568
Query: 538 GGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFHSMDPC 597
GGRSVVC +VEQHVIV G YQ++GSVI+FVDKQE+AD LL M
Sbjct: 569 GGRSVVCSDVEQHVIVIEEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKAS 628
Query: 598 LEFLPLPAGITRF 610
+ L GI ++
Sbjct: 629 YPCMSLHGGIDQY 641
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 1424 (506.3 bits), Expect = 9.3e-146, P = 9.3e-146
Identities = 284/436 (65%), Positives = 333/436 (76%)
Query: 177 EEDIDPLDAFMQGVHEEMRKVNKPAVPTT--ADVKPADSGSKPAXXXXXXXXXXXXXEKA 234
+E++DPLDA+M+ V EE++K N +V ++ K + +K EK
Sbjct: 221 DEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTK-VVTVVTTKKAVVETEKK 279
Query: 235 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 294
KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVP
Sbjct: 280 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 339
Query: 295 EIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQA 354
E+A+MT GI VKGKGCP+PIKTW QCG+S KIL ALKK YEKPTPIQ+
Sbjct: 340 ELAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQS 399
Query: 355 QAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQ 414
QAIPAIM+GRDLIGIAKTGSGKT+AF+LP+ RHI+DQ LEE +GP+A+IM+PTREL +Q
Sbjct: 400 QAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQ 459
Query: 415 IGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNL 474
I KE KKF+K+LGLRVVCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDMLAAN+GRVTNL
Sbjct: 460 ITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNL 519
Query: 475 RRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIE 534
RRVTY+VLDEADRMFDMGFEPQVMRI+DNVRPDRQTVMFSATFPR MEALARRIL+KPIE
Sbjct: 520 RRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIE 579
Query: 535 IQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFHSM 594
+QVGGRSVVC +VEQHVIV G YQ++GSVI+FVDKQE+AD LL M
Sbjct: 580 VQVGGRSVVCSDVEQHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLM 639
Query: 595 DPCLEFLPLPAGITRF 610
L L GI ++
Sbjct: 640 RASYPCLSLHGGIDQY 655
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 1409 (501.1 bits), Expect = 3.6e-144, P = 3.6e-144
Identities = 281/436 (64%), Positives = 331/436 (75%)
Query: 177 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKA 234
+E++DPLDA+M+ V EE++K N +V A + K + +K +K
Sbjct: 222 DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTK-VVTVVTTKKAVVDADKK 280
Query: 235 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 294
KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVP
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 340
Query: 295 EIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQA 354
E+A+M+ GI VKGKGCP+PIK+W QCG+S KIL++LKK YEKPTPIQ
Sbjct: 341 ELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 355 QAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQ 414
QAIPAIMSGRDLIGIAKTGSGKT+AF+LP+ RHI+DQ LEE +GP+A+IM+PTREL +Q
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQ 460
Query: 415 IGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNL 474
I KE KKF+K+LGLRVVCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDMLAANSGRVTNL
Sbjct: 461 ITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNL 520
Query: 475 RRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIE 534
RRVTY+VLDEADRMFDMGFEPQVMRI+DNVRPDRQTVMFSATFPR MEALARRIL+KPIE
Sbjct: 521 RRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIE 580
Query: 535 IQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFHSM 594
+QVGGRSVVC +VEQ VIV G YQ+ GSVI+FVDKQE+AD LL M
Sbjct: 581 VQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLM 640
Query: 595 DPCLEFLPLPAGITRF 610
+ L GI ++
Sbjct: 641 RASYPCMSLHGGIDQY 656
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 1409 (501.1 bits), Expect = 3.6e-144, P = 3.6e-144
Identities = 281/436 (64%), Positives = 331/436 (75%)
Query: 177 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKA 234
+E++DPLDA+M+ V EE++K N +V A + K + +K +K
Sbjct: 222 DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTK-VVTVVTTKKAVVDADKK 280
Query: 235 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 294
KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVP
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 340
Query: 295 EIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQA 354
E+A+M+ GI VKGKGCP+PIK+W QCG+S KIL++LKK YEKPTPIQ
Sbjct: 341 ELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 355 QAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQ 414
QAIPAIMSGRDLIGIAKTGSGKT+AF+LP+ RHI+DQ LEE +GP+A+IM+PTREL +Q
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQ 460
Query: 415 IGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNL 474
I KE KKF+K+LGLRVVCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDMLAANSGRVTNL
Sbjct: 461 ITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNL 520
Query: 475 RRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIE 534
RRVTY+VLDEADRMFDMGFEPQVMRI+DNVRPDRQTVMFSATFPR MEALARRIL+KPIE
Sbjct: 521 RRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIE 580
Query: 535 IQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFHSM 594
+QVGGRSVVC +VEQ VIV G YQ+ GSVI+FVDKQE+AD LL M
Sbjct: 581 VQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLM 640
Query: 595 DPCLEFLPLPAGITRF 610
+ L GI ++
Sbjct: 641 RASYPCMSLHGGIDQY 656
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 1409 (501.1 bits), Expect = 3.6e-144, P = 3.6e-144
Identities = 281/436 (64%), Positives = 331/436 (75%)
Query: 177 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKA 234
+E++DPLDA+M+ V EE++K N +V A + K + +K +K
Sbjct: 222 DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTK-VVTVVTTKKAVVDADKK 280
Query: 235 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 294
KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVP
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 340
Query: 295 EIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQA 354
E+A+M+ GI VKGKGCP+PIK+W QCG+S KIL++LKK YEKPTPIQ
Sbjct: 341 ELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 355 QAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQ 414
QAIPAIMSGRDLIGIAKTGSGKT+AF+LP+ RHI+DQ LEE +GP+A+IM+PTREL +Q
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQ 460
Query: 415 IGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNL 474
I KE KKF+K+LGLRVVCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDMLAANSGRVTNL
Sbjct: 461 ITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNL 520
Query: 475 RRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIE 534
RRVTY+VLDEADRMFDMGFEPQVMRI+DNVRPDRQTVMFSATFPR MEALARRIL+KPIE
Sbjct: 521 RRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIE 580
Query: 535 IQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFHSM 594
+QVGGRSVVC +VEQ VIV G YQ+ GSVI+FVDKQE+AD LL M
Sbjct: 581 VQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLM 640
Query: 595 DPCLEFLPLPAGITRF 610
+ L GI ++
Sbjct: 641 RASYPCMSLHGGIDQY 656
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 1404 (499.3 bits), Expect = 1.2e-143, P = 1.2e-143
Identities = 282/441 (63%), Positives = 331/441 (75%)
Query: 173 GKTAE-EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXX 229
G E E++DPLDA+M+ V EE++K N +V + K + +K
Sbjct: 217 GNEVEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVV 275
Query: 230 XXEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 289
+K KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+F
Sbjct: 276 DSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNF 335
Query: 290 YVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKP 349
YVEVPE+A+M+ GI VKGKGCP+PIK+W QCG+S KIL++LKK YEKP
Sbjct: 336 YVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKP 395
Query: 350 TPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTR 409
TPIQ QAIPAIMSGRDLIGIAKTGSGKT+AF+LP+ RHI+DQ LEE +GP+A+IM+PTR
Sbjct: 396 TPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTR 455
Query: 410 ELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSG 469
EL +QI KE KKF+K+LGLRVVCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDMLAANSG
Sbjct: 456 ELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSG 515
Query: 470 RVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRIL 529
RVTNLRRVTY+VLDEADRMFDMGFEPQVMRI+DNVRPDRQTVMFSATFPR MEALARRIL
Sbjct: 516 RVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRIL 575
Query: 530 NKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
+KPIE+QVGGRSVVC +VEQ VIV G YQ+ GSVI+FVDKQE+AD L
Sbjct: 576 SKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGL 635
Query: 590 LFHSMDPCLEFLPLPAGITRF 610
L M + L GI ++
Sbjct: 636 LKDLMRASYPCMSLHGGIDQY 656
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 1403 (498.9 bits), Expect = 1.6e-143, P = 1.6e-143
Identities = 280/435 (64%), Positives = 329/435 (75%)
Query: 178 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 235
E++DPLDA+M+ V EE++K N +V + K + +K +K K
Sbjct: 223 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 281
Query: 236 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 295
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVPE
Sbjct: 282 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 341
Query: 296 IARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQ 355
+A+M+ GI VKGKGCP+PIK+W QCG+S KIL++LKK YEKPTPIQ Q
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 356 AIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQI 415
AIPAIMSGRDLIGIAKTGSGKT+AF+LP+ RHI+DQ LEE +GP+A+IM+PTREL +QI
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQI 461
Query: 416 GKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 475
KE KKF+K+LGLRVVCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDMLAANSGRVTNLR
Sbjct: 462 TKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 521
Query: 476 RVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEI 535
RVTY+VLDEADRMFDMGFEPQVMRI+DNVRPDRQTVMFSATFPR MEALARRIL+KPIE+
Sbjct: 522 RVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEV 581
Query: 536 QVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFHSMD 595
QVGGRSVVC +VEQ VIV G YQ+ GSVI+FVDKQE+AD LL M
Sbjct: 582 QVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMR 641
Query: 596 PCLEFLPLPAGITRF 610
+ L GI ++
Sbjct: 642 ASYPCMSLHGGIDQY 656
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 1403 (498.9 bits), Expect = 1.6e-143, P = 1.6e-143
Identities = 280/435 (64%), Positives = 329/435 (75%)
Query: 178 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 235
E++DPLDA+M+ V EE++K N +V + K + +K +K K
Sbjct: 223 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 281
Query: 236 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 295
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVPE
Sbjct: 282 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 341
Query: 296 IARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQ 355
+A+M+ GI VKGKGCP+PIK+W QCG+S KIL++LKK YEKPTPIQ Q
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 356 AIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQI 415
AIPAIMSGRDLIGIAKTGSGKT+AF+LP+ RHI+DQ LEE +GP+A+IM+PTREL +QI
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQI 461
Query: 416 GKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 475
KE KKF+K+LGLRVVCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDMLAANSGRVTNLR
Sbjct: 462 TKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 521
Query: 476 RVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEI 535
RVTY+VLDEADRMFDMGFEPQVMRI+DNVRPDRQTVMFSATFPR MEALARRIL+KPIE+
Sbjct: 522 RVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEV 581
Query: 536 QVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFHSMD 595
QVGGRSVVC +VEQ VIV G YQ+ GSVI+FVDKQE+AD LL M
Sbjct: 582 QVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMR 641
Query: 596 PCLEFLPLPAGITRF 610
+ L GI ++
Sbjct: 642 ASYPCMSLHGGIDQY 656
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
Identities = 280/435 (64%), Positives = 329/435 (75%)
Query: 178 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 235
E++DPLDA+M+ V EE++K N +V + K + +K +K K
Sbjct: 223 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 281
Query: 236 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 295
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVPE
Sbjct: 282 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 341
Query: 296 IARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQ 355
+A+M+ GI VKGKGCP+PIK+W QCG+S KIL++LKK YEKPTPIQ Q
Sbjct: 342 LAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 356 AIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQI 415
AIPAIMSGRDLIGIAKTGSGKT+AF+LP+ RHI+DQ LEE +GP+A+IM+PTREL +QI
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQI 461
Query: 416 GKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 475
KE KKF+K+LGLRVVCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDMLAANSGRVTNLR
Sbjct: 462 TKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 521
Query: 476 RVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEI 535
RVTY+VLDEADRMFDMGFEPQVMRI+DNVRPDRQTVMFSATFPR MEALARRIL+KPIE+
Sbjct: 522 RVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEV 581
Query: 536 QVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFHSMD 595
QVGGRSVVC +VEQ VIV G YQ+ GSVI+FVDKQE+AD LL M
Sbjct: 582 QVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMR 641
Query: 596 PCLEFLPLPAGITRF 610
+ L GI ++
Sbjct: 642 ASYPCMSLHGGIDQY 656
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 1132 (403.5 bits), Expect = 3.3e-117, Sum P(2) = 3.3e-117
Identities = 219/377 (58%), Positives = 282/377 (74%)
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 291
E KG+++E N+D ++ ++ D+ + AA+L K + L++ DHS + Y F+K+FY+
Sbjct: 214 EPEKGQVLE-NEDNMDMVIDDF--DIETAAASLCHKGRM-LAQTDHSKVYYRKFKKNFYI 269
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTP 351
E EI RMT I VKG CP+PIKTWAQCGV+ K+++ LKK Y KPT
Sbjct: 270 ETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTS 329
Query: 352 IQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTREL 411
IQAQAIP+IMSGRD+IGIAKTGSGKT+AF+LP+ RHILDQP LEE DGP+A+I++PTREL
Sbjct: 330 IQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTREL 389
Query: 412 CMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRV 471
MQ KEA KF K LGL+V C YGG GISEQI++LKRGAEI+VCTPGRMID+LAANSG+V
Sbjct: 390 AMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKV 449
Query: 472 TNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNK 531
TNLRRVTY+VLDEADRMFD GFEPQ+M++++N+RPD+QTV+FSATFPR MEALAR++L+K
Sbjct: 450 TNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDK 509
Query: 532 PIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLF 591
P+EI VGG+SVVC ++ Q+ ++ G+Y ++GS IVFVDKQE AD ++
Sbjct: 510 PVEILVGGKSVVCSDITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVD 569
Query: 592 HSMDPCLEFL-PLPAGI 607
M + PL GI
Sbjct: 570 QLMRTGYNSVAPLHGGI 586
Score = 43 (20.2 bits), Expect = 3.3e-117, Sum P(2) = 3.3e-117
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 177 EEDIDPLDAFMQGV 190
+++ DPLDAFM+ +
Sbjct: 173 DDEEDPLDAFMKEI 186
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
Identities = 228/437 (52%), Positives = 291/437 (66%)
Query: 173 GKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPT-----TADVKP--ADSGSKPAXXXXXX 224
G EE+IDPLDAFM V E+ K A P T D K +SG +P
Sbjct: 373 GAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRPKKGFNKA 432
Query: 225 XXXXXXXEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLP 284
E + + E D + S +E+ E+ +K +K LS VDHS IEY P
Sbjct: 433 LGRIIQGEDSDSDYSEPKNDD-DPSLDEDDEEFMKRVKK--TKAEK-LSLVDHSKIEYEP 488
Query: 285 FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQ 344
FRK+FY+EV +I+RMT ++V GK PRPIK W Q G++ KILD +KK
Sbjct: 489 FRKNFYIEVKDISRMTQEEVNTYRKELE-LKVHGKDVPRPIKFWHQTGLTSKILDTMKKL 547
Query: 345 NYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAII 404
NYEKP PIQ QA+P IMSGRD IG+AKTGSGKT+ FVLP+LRHI DQPP+E DGP+ ++
Sbjct: 548 NYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 607
Query: 405 MSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDML 464
M+PTREL QI + +KF+K LG+R V VYGG+G+++QISELKRG EI+VCTPGRMID+L
Sbjct: 608 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 667
Query: 465 AANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEAL 524
+SG++TNLRRVT++V+DEADRMFDMGFEPQ+ RII N+RP+RQTV+FSATFPRQ+E L
Sbjct: 668 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 727
Query: 525 ARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQE 584
AR++LNKP+EIQVGGRSVV K++ Q V V G + ++G ++VFV QE
Sbjct: 728 ARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQE 787
Query: 585 NADSL---LFHSMDPCL 598
D+L + S PCL
Sbjct: 788 KCDALYRDMIKSSYPCL 804
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 218/420 (51%), Positives = 286/420 (68%)
Query: 174 KTAEED-IDPLDAFMQG-VHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 231
+ A+ED IDPLDAFM V E+ K++ + D K +G +
Sbjct: 244 RAADEDEIDPLDAFMNTMVLPEVEKLSNIVIDGILDFKM--NGKETGDQAKKGFNKAALG 301
Query: 232 EKAKGELMEENQDGLEYSSEEE---QEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKD 288
+GE + + D E S+++ ED + + ++LS VDHS IEY PFRK+
Sbjct: 302 RIIQGE--DSDSDYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKN 359
Query: 289 FYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEK 348
FY+EV +I+RMT ++V GK PRPI+ W Q G++ KILD LKK NYEK
Sbjct: 360 FYIEVKDISRMTQDAVNAYRKELE-LKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEK 418
Query: 349 PTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPT 408
P PIQAQA+P IMSGRD IG+AKTGSGKT+ FVLP+LRHI DQPP+E DGP+ ++M+PT
Sbjct: 419 PMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPT 478
Query: 409 RELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANS 468
REL QI + +KF+K+LG+ V VYGG+G+++QISELKRG EI+VCTPGRMID+L +S
Sbjct: 479 RELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSS 538
Query: 469 GRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRI 528
G++TNLRRVTY+V+DEADRMFDMGFEPQ+ RI+ N+RPDRQTV+FSATFPRQ+E LAR++
Sbjct: 539 GKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKV 598
Query: 529 LNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADS 588
LNKP+EIQVGGRSVV K++ Q V + G + ++G V+VFV QE + S
Sbjct: 599 LNKPVEIQVGGRSVVNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQEKSIS 658
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 1028 (366.9 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 206/354 (58%), Positives = 259/354 (73%)
Query: 242 NQDGLEYSSE--EEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 299
N D SE EE+E+L + AA SK KK++ VDHS I Y F+KDFYVE E+ +
Sbjct: 334 NDDERMVISETLEEEENLLALAAK-RSK-KKDVITVDHSKINYEDFKKDFYVEPEELKNL 391
Query: 300 TPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPA 359
+P GI+++G CP+P+ +W+QCG+S + + + YEKPT IQAQAIPA
Sbjct: 392 SPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPA 451
Query: 360 IMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEA 419
I SGRD+IG+AKTGSGKT+AF+LP+ RHI DQ PL+ +GP+AIIM+PTREL +QI +E
Sbjct: 452 ITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFREC 511
Query: 420 KKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 479
K F K L +R C YGG I +QI++LKRGAEI+VCTPGRMID+L+AN+GRVTNL R TY
Sbjct: 512 KPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTY 571
Query: 480 IVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGG 539
+VLDEADRMFD+GFEPQVMRII+N+RPDRQTV+FSATFPR MEALAR++L KP+EI VGG
Sbjct: 572 LVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGG 631
Query: 540 RSVVCKEVEQHVIVXXXXXXXXXXXXXXG-IYQDQGSV--IVFVDKQENADSLL 590
RSVV EVEQ V V G +Y +Q V +VFVD+QE+AD+LL
Sbjct: 632 RSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALL 685
Score = 48 (22.0 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 177 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 210
E+++DPLDA+M + + +P + T + P
Sbjct: 299 EDEVDPLDAYMASLVGTTDTI-RPGLLNTEVIDP 331
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 998 (356.4 bits), Expect = 1.0e-105, Sum P(3) = 1.0e-105
Identities = 202/367 (55%), Positives = 258/367 (70%)
Query: 240 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 299
+E+ + E + ED + A+ +K+KK++ VDH+ +EY PFR+ FY E ++A+M
Sbjct: 457 DEHDVSMTAVGEGDAEDFLAIASK--AKKKKDIPTVDHNKVEYEPFRRKFYTEPSDLAQM 514
Query: 300 TPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPA 359
+ GI+V+G P+P++ W+QCG+ + LD + K + T IQAQAIPA
Sbjct: 515 SEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIPA 574
Query: 360 IMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEA 419
IMSGRD+IG+AKTGSGKT+AF++P+ RHI DQ PLE +GP+ +IM+PTREL QI K+
Sbjct: 575 IMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDC 634
Query: 420 KKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 479
K F K+L LR VC YGG I +QI+ELKRGAEIIVCTPGRMID+LAAN+GRVTNLRRVTY
Sbjct: 635 KPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTY 694
Query: 480 IVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGG 539
+VLDEADRMFDMGFEPQVM+I+ NVRPDRQTV+FSATFPR MEALAR+ L KPIEI VGG
Sbjct: 695 VVLDEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGG 754
Query: 540 RSVVCKEVEQHVIVXXXXXXXXXXXXXXG-IYQ-DQGS---VIVFVDKQENADSLLFHSM 594
RSVV E+ Q V V G +Y D+ ++FVD+QE AD+LL M
Sbjct: 755 RSVVAPEITQIVEVCNEEKKFVRLLELLGNLYSTDENEDARSLIFVDRQEAADTLLRELM 814
Query: 595 D---PCL 598
PC+
Sbjct: 815 RKGYPCM 821
Score = 54 (24.1 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 177 EEDIDPLDAFMQGVHE 192
EE++DPLDAFM + E
Sbjct: 418 EEELDPLDAFMSELAE 433
Score = 42 (19.8 bits), Expect = 1.0e-105, Sum P(3) = 1.0e-105
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 237 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE 271
E ++ D ++ E +ED + AA +A+++++E
Sbjct: 354 ETNADDDDDVDMQDGETEED-AAAAARVAAERREE 387
Score = 40 (19.1 bits), Expect = 1.0e-105, Sum P(3) = 1.0e-105
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 188 QGVHEEMRKVNKPAVPT----TADVKPADSGSK 216
+G + R+ + PA+PT T D K A+ +K
Sbjct: 146 RGAEPKSREASTPAIPTRTGPTDDEKRAERLAK 178
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 994 (355.0 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 197/370 (53%), Positives = 262/370 (70%)
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 291
+K+K M ++ + LE SE E + T K KKE+ DH++I+Y F+K+FY+
Sbjct: 420 KKSKTSQMIDDDEKLEEESEGEDDGKDKTI----KKGKKEMLHTDHTSIKYAEFQKNFYI 475
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTP 351
EVP +A MT G+++ GK CP+PI++WAQ G+++K+ LKK YEKPT
Sbjct: 476 EVPVLANMTETEVLDFRSEL-GVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTS 534
Query: 352 IQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTREL 411
IQAQ IPAIM+GRDLIGIA+TGSGKT+AF+LP+ RHIL QP +G +A+IMSPTREL
Sbjct: 535 IQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTREL 594
Query: 412 CMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRV 471
+QI E KKF+K LGLR CVYGG ISEQI+ELKRGA+I+VCTPGRMID+L AN+ R+
Sbjct: 595 ALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRI 654
Query: 472 TNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNK 531
TNLRRVT++VLDEADRMFDMGF PQ+ I+D++RPDRQT+MFSATFP ++E +A++ILNK
Sbjct: 655 TNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNK 714
Query: 532 PIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL-- 589
P+EI GGRS+V ++EQ V V I+ +G +++F ++QE D+L
Sbjct: 715 PLEIIAGGRSIVSSDIEQFVEVRPTETRFRRLIELLSIWYHKGQILIFTNRQETTDNLYR 774
Query: 590 -LFHSMDPCL 598
L +S CL
Sbjct: 775 QLSNSQYQCL 784
Score = 37 (18.1 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 100 DKEVEATRLELEMQK 114
+K++E LE EM+K
Sbjct: 258 EKKIEQANLEEEMKK 272
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 952 (340.2 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 180/345 (52%), Positives = 248/345 (71%)
Query: 249 SSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXX 308
+S +E D + A A ++KKE+ +D+S ++ +P RK+F+VE E++ MT
Sbjct: 301 ASTKEGVDAKAIMAMAAKRKKKEIPTIDYSKLDIVPVRKNFWVEPYELSEMTEAEVAELR 360
Query: 309 XXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIG 368
GI+V GK P+P++ W+ CG+++ ILD + K Y+KPT IQ QA+P IMSGRD++G
Sbjct: 361 LELDGIKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVG 420
Query: 369 IAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGL 428
+AKTGSGKT+AF+LP+ RHI DQ P+++ +GP+ +I++PTREL +QI ++ K F K+LGL
Sbjct: 421 VAKTGSGKTMAFLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGL 480
Query: 429 RVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRM 488
R VC YGG I +QI++LKRGAEI+V T GRMID+LAAN GRV +LRR TYIVLDEADRM
Sbjct: 481 RAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRM 540
Query: 489 FDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVE 548
FDMGFEPQVM+I NVRPDRQTV+FSAT P+ M+AL +++L P+EI+VGG+SVV E+
Sbjct: 541 FDMGFEPQVMKIFANVRPDRQTVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVASEIT 600
Query: 549 QHVIVXXXXXXXXXXXXXXG-IYQDQGSV--IVFVDKQENADSLL 590
Q V + G +Y+D V ++FV++QE AD LL
Sbjct: 601 QIVEIRDEKSKFNRLLELLGELYKDDDDVRSLIFVERQEKADELL 645
Score = 56 (24.8 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 174 KTAEEDIDPLDAFMQGVHE-EMRKVNKPAVPTTADVK 209
K ++++DPLDAFM + E +KP V T + K
Sbjct: 249 KEDDDEVDPLDAFMADLTEPSFGPASKP-VKTLSSAK 284
Score = 39 (18.8 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 240 EENQDGLEYSSEEEQEDLTSTAANLASKQKKE 271
+E+ DG ++ EE+ + AA A ++++E
Sbjct: 169 DEDSDGDNFAGTEEE---AAAAARAAHERREE 197
>UNIPROTKB|D6RJA6 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0005730
EMBL:CH471062 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:Hs.406549 HGNC:HGNC:18681 ChiTaRS:DDX46 EMBL:AC006077
EMBL:AC010301 IPI:IPI00967303 SMR:D6RJA6 Ensembl:ENST00000507392
Uniprot:D6RJA6
Length = 471
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 183/294 (62%), Positives = 221/294 (75%)
Query: 178 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 235
E++DPLDA+M+ V EE++K N +V + K + +K +K K
Sbjct: 175 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 233
Query: 236 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 295
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVPE
Sbjct: 234 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 293
Query: 296 IARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQ 355
+A+M+ GI VKGKGCP+PIK+W QCG+S KIL++LKK YEKPTPIQ Q
Sbjct: 294 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 353
Query: 356 AIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQI 415
AIPAIMSGRDLIGIAKTGSGKT+AF+LP+ RHI+DQ LEE +GP+A+IM+PTREL +QI
Sbjct: 354 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQI 413
Query: 416 GKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSG 469
KE KKF+K+LGLRVVCVYGGTGISEQI+ELKRGAEIIVCTPGRMIDMLAANSG
Sbjct: 414 TKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSG 467
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 184/420 (43%), Positives = 248/420 (59%)
Query: 178 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAKGE 237
++IDPLDAFM+G+H+EM+ P P + D P A
Sbjct: 76 DEIDPLDAFMEGIHQEMKSAPPPK-PKEKLERYKDDDDDPVESYLKAKKDLGLTLAADAL 134
Query: 238 LMEENQDGLEYSSEEEQE----DLTSTAANLA-SKQKKE-LSKVDHSTIEYLPFRKDFYV 291
N D Y++ + + D S + K+K E ++ +DHS+I+Y P KDFY
Sbjct: 135 NAGYNSDEEVYAAAKAVDAGMLDYDSDDNPIVVDKRKIEPITALDHSSIDYEPINKDFYE 194
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTP 351
E+ I+ MT GIRV G RP+KT+ CG S +I+ A+KKQ YEKPT
Sbjct: 195 ELESISGMTEQETTDYRQRL-GIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTA 253
Query: 352 IQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTREL 411
IQ QA+P ++SGRD+IGIAKTGSGKT AFVLP++ HI+DQP L+ +GP+ +I +PTREL
Sbjct: 254 IQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTREL 313
Query: 412 CMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRV 471
QI EAKKF+K+ GLRV VYGG EQ ELK G EI+V TPGR+IDML +
Sbjct: 314 AHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKM---KA 370
Query: 472 TNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNK 531
+ R +Y+VLDEADRMFD+GFEPQV I+ +RPDRQT++FSAT P ++E LAR IL+
Sbjct: 371 LTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSD 430
Query: 532 PIEIQVGGRSVVCKEVEQ--HVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
PI + VG + +++ Q +VI G+ D+G V+VF K+ D +
Sbjct: 431 PIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMI-DEGDVLVFASKKATVDEI 489
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 174/373 (46%), Positives = 234/373 (62%)
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 291
EK + + + E E +DL ST + KEL +DHS Y FRK FY
Sbjct: 199 EKENDDYGGDGDEEDESDEESRLQDLISTKLTKLQNKGKELQSIDHSQENYQEFRKVFYR 258
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALK-KQNYEKPT 350
E E++ ++ I+VKG PRPI W+ + + + K +EKP+
Sbjct: 259 EAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPS 318
Query: 351 PIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRE 410
IQ+QA+P I+SGRD+IGIAKTGSGKT+++VLP+LRHI DQ ++ GP+ +I+SPTRE
Sbjct: 319 AIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRE 378
Query: 411 LCMQIGKEAKKFTK-SLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSG 469
L +QI KE FTK + LRV C YGG+ I QI+ELK+G EIIV TPGR+ID+LAANSG
Sbjct: 379 LALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSG 438
Query: 470 RVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRIL 529
RV NL+R T++VLDEADRMFD+GFEPQV +I+ +RPDRQTV+FSATFPR+ME LA++IL
Sbjct: 439 RVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKMETLAKQIL 498
Query: 530 NKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI---------YQDQ---GSVI 577
P+ I VGG SVV E++Q V++ + YQ + ++
Sbjct: 499 TDPVVIIVGGISVVAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKIL 558
Query: 578 VFVDKQENADSLL 590
VF +KQ +AD L+
Sbjct: 559 VFTEKQNDADELV 571
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 174/373 (46%), Positives = 234/373 (62%)
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 291
EK + + + E E +DL ST + KEL +DHS Y FRK FY
Sbjct: 199 EKENDDYGGDGDEEDESDEESRLQDLISTKLTKLQNKGKELQSIDHSQENYQEFRKVFYR 258
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALK-KQNYEKPT 350
E E++ ++ I+VKG PRPI W+ + + + K +EKP+
Sbjct: 259 EAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPS 318
Query: 351 PIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRE 410
IQ+QA+P I+SGRD+IGIAKTGSGKT+++VLP+LRHI DQ ++ GP+ +I+SPTRE
Sbjct: 319 AIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRE 378
Query: 411 LCMQIGKEAKKFTK-SLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSG 469
L +QI KE FTK + LRV C YGG+ I QI+ELK+G EIIV TPGR+ID+LAANSG
Sbjct: 379 LALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSG 438
Query: 470 RVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRIL 529
RV NL+R T++VLDEADRMFD+GFEPQV +I+ +RPDRQTV+FSATFPR+ME LA++IL
Sbjct: 439 RVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKMETLAKQIL 498
Query: 530 NKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI---------YQDQ---GSVI 577
P+ I VGG SVV E++Q V++ + YQ + ++
Sbjct: 499 TDPVVIIVGGISVVAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKIL 558
Query: 578 VFVDKQENADSLL 590
VF +KQ +AD L+
Sbjct: 559 VFTEKQNDADELV 571
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 752 (269.8 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 175/422 (41%), Positives = 240/422 (56%)
Query: 176 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 231
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 288
A G + EE +D LEY S+ N + KK L +DHS I+Y PF K+
Sbjct: 168 PTA-GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKN 216
Query: 289 FYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEK 348
FY E EI +TP +RV G PRP ++A G ++++ ++K Y +
Sbjct: 217 FYNEHEEITNLTPQQLIDLRHKL-NLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQ 275
Query: 349 PTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPT 408
PTPIQ Q +P +SGRD+IGIAKTGSGKT AF+ P+L HI+DQ LE DGP+A+I+ PT
Sbjct: 276 PTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPT 335
Query: 409 RELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANS 468
RELC QI E K+F K+ LR V VYGG + EQ L+ GAEI+VCTPGR+ID +
Sbjct: 336 RELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK-- 393
Query: 469 GRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRI 528
+ TNL+RV+Y+V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR I
Sbjct: 394 -KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDI 452
Query: 529 LNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENAD 587
L PI + G ++V Q V + + + GSV++FV K+ NA+
Sbjct: 453 LIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAE 512
Query: 588 SL 589
L
Sbjct: 513 EL 514
Score = 40 (19.1 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 179 DIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPA 218
+ D +A+ + E+ V+ P +P SKPA
Sbjct: 68 NFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPA 107
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 752 (269.8 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 175/422 (41%), Positives = 240/422 (56%)
Query: 176 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 231
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 288
A G + EE +D LEY S+ N + KK L +DHS I+Y PF K+
Sbjct: 168 PTA-GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKN 216
Query: 289 FYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEK 348
FY E EI +TP +RV G PRP ++A G ++++ ++K Y +
Sbjct: 217 FYNEHEEITNLTPQQLIDLRHKL-NLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQ 275
Query: 349 PTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPT 408
PTPIQ Q +P +SGRD+IGIAKTGSGKT AF+ P+L HI+DQ LE DGP+A+I+ PT
Sbjct: 276 PTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPT 335
Query: 409 RELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANS 468
RELC QI E K+F K+ LR V VYGG + EQ L+ GAEI+VCTPGR+ID +
Sbjct: 336 RELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK-- 393
Query: 469 GRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRI 528
+ TNL+RV+Y+V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR I
Sbjct: 394 -KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDI 452
Query: 529 LNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENAD 587
L PI + G ++V Q V + + + GSV++FV K+ NA+
Sbjct: 453 LIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAE 512
Query: 588 SL 589
L
Sbjct: 513 EL 514
Score = 40 (19.1 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 179 DIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPA 218
+ D +A+ + E+ V+ P +P SKPA
Sbjct: 68 NFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPA 107
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 752 (269.8 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 175/422 (41%), Positives = 240/422 (56%)
Query: 176 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 231
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 288
A G + EE +D LEY S+ N + KK L +DHS I+Y PF K+
Sbjct: 168 PTA-GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKN 216
Query: 289 FYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEK 348
FY E EI +TP +RV G PRP ++A G ++++ ++K Y +
Sbjct: 217 FYNEHEEITNLTPQQLIDLRHKL-NLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQ 275
Query: 349 PTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPT 408
PTPIQ Q +P +SGRD+IGIAKTGSGKT AF+ P+L HI+DQ LE DGP+A+I+ PT
Sbjct: 276 PTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPT 335
Query: 409 RELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANS 468
RELC QI E K+F K+ LR V VYGG + EQ L+ GAEI+VCTPGR+ID +
Sbjct: 336 RELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK-- 393
Query: 469 GRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRI 528
+ TNL+RV+Y+V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR I
Sbjct: 394 -KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDI 452
Query: 529 LNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENAD 587
L PI + G ++V Q V + + + GSV++FV K+ NA+
Sbjct: 453 LIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAE 512
Query: 588 SL 589
L
Sbjct: 513 EL 514
Score = 40 (19.1 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 179 DIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPA 218
+ D +A+ + E+ V+ P +P SKPA
Sbjct: 68 NFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFRSKPA 107
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 169/419 (40%), Positives = 249/419 (59%)
Query: 176 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAK 235
++ D DPL+ FM G+++++ K + P KP E++
Sbjct: 128 SDSDEDPLEQFMAGINQQVEKEKRQQAP------------KPPTQAVRGDIDDEDDEESY 175
Query: 236 GELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFYV 291
M+EN + GL +++ + +A +KK+ L + HS IEY PF K+FY
Sbjct: 176 YRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFEKNFYT 235
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTP 351
+ +IA + G++V G P+P+ ++ G ++++ A++K Y +PTP
Sbjct: 236 QHDDIAALDDEQVRELRRTL-GVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTP 294
Query: 352 IQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTREL 411
IQAQA+P +SGRD+IGIAKTGSGKT AF+ P+L H++DQ L+ DGP+ +I++PTREL
Sbjct: 295 IQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPGDGPIGLILAPTREL 354
Query: 412 CMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRV 471
+QI EAKKF K L VVC YGG EQ L++GAEIIV TPGRMIDM+ +
Sbjct: 355 SLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKM---KA 411
Query: 472 TNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNK 531
TNLRRVT++VLDEADRMF MGFEPQV I ++VRPDRQ +MFSATF +++E LAR +L+
Sbjct: 412 TNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKRIERLARDVLSD 471
Query: 532 PIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENADSL 589
P+ I G + +++ Q V V + + +GSV++FV K+ +A+++
Sbjct: 472 PVRIVQGDLNEANQDITQSVYVFPNPLQKWNWLLCHLVKFLSEGSVLIFVTKKVDAETV 530
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 177/420 (42%), Positives = 236/420 (56%)
Query: 176 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADS--GSKPAXXXXXXXXXXXXXEK 233
++ D DPL+AFM V ++ + K + K A
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEDKDKEKKNAKGIRDDIEEEDDQEAYFRYMAENP 168
Query: 234 AKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFY 290
G + EE +D LEY S+ N + KK L +DHS IEY PF K+FY
Sbjct: 169 TAGVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFY 218
Query: 291 VEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPT 350
E EI +TP +RV G PRP ++A+ G ++++ ++K Y +PT
Sbjct: 219 DEHEEITSLTPQQVVELRHKL-NLRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPT 277
Query: 351 PIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRE 410
PIQ Q +P MSGRD+IGIAKTGSGKT AF+ P+L HI+DQ LE DGP+A+I+ PTRE
Sbjct: 278 PIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRE 337
Query: 411 LCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGR 470
LC QI E K+F K+ LR V VYGG + EQ L+ GAEI+VCTPGR+ID + +
Sbjct: 338 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK---K 394
Query: 471 VTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILN 530
TNL+RVTY+V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR IL
Sbjct: 395 ATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILI 454
Query: 531 KPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENADSL 589
PI + G ++V Q V + + + GSV++FV K+ NA+ L
Sbjct: 455 DPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEEL 514
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 179/418 (42%), Positives = 237/418 (56%)
Query: 176 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAK 235
++ D DPL+AFM E + N A ++ D K A E A
Sbjct: 109 SDSDDDPLEAFMA---ESVE--NDQAARDMKRLEDKDKEKKNAKGIRDDIEEEDDQE-AY 162
Query: 236 GELMEENQD-GLEYSSEEEQEDLTSTAANLASKQK--KELSKVDHSTIEYLPFRKDFYVE 292
M EN G+ EE+ + S +A +K L +DHS IEY PF K+FY E
Sbjct: 163 FRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDE 222
Query: 293 VPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPI 352
EI +TP +RV G PRP ++A G ++++ ++K Y +PTPI
Sbjct: 223 HEEITSLTPQQVVELRHKL-NLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPI 281
Query: 353 QAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELC 412
Q Q +P MSGRD+IGIAKTGSGKT AF+ P+L HI+DQ LE DGP+A+I+ PTRELC
Sbjct: 282 QCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 341
Query: 413 MQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVT 472
QI E K+F K+ LR V VYGG + EQ L+ GAEI+VCTPGR+ID + + T
Sbjct: 342 QQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK---KAT 398
Query: 473 NLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKP 532
NL+RVTY+V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR IL P
Sbjct: 399 NLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDP 458
Query: 533 IEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENADSL 589
I + G ++V Q V + + + GSV++FV K+ NA+ L
Sbjct: 459 IRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEEL 516
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 177/420 (42%), Positives = 235/420 (55%)
Query: 176 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADS--GSKPAXXXXXXXXXXXXXEK 233
++ D DPL+AFM V ++ + K + K A
Sbjct: 104 SDSDDDPLEAFMAEVEDQAARDMKRLEDKDKEKKNAKGIRDDIEEEDDQEAYFRYMAENP 163
Query: 234 AKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFY 290
G + EE +D LEY S+ N + KK L +DHS IEY PF K+FY
Sbjct: 164 TAGVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFY 213
Query: 291 VEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPT 350
E EI +TP +RV G PRP ++A G ++++ ++K Y +PT
Sbjct: 214 DEHEEITSLTPQQVVELRHKL-NLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPT 272
Query: 351 PIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRE 410
PIQ Q +P MSGRD+IGIAKTGSGKT AF+ P+L HI+DQ LE DGP+A+I+ PTRE
Sbjct: 273 PIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRE 332
Query: 411 LCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGR 470
LC QI E K+F K+ LR V VYGG + EQ L+ GAEI+VCTPGR+ID + +
Sbjct: 333 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK---K 389
Query: 471 VTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILN 530
TNL+RVTY+V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR IL
Sbjct: 390 ATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILI 449
Query: 531 KPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENADSL 589
PI + G ++V Q V + + + GSV++FV K+ NA+ L
Sbjct: 450 DPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEEL 509
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 175/421 (41%), Positives = 239/421 (56%)
Query: 176 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 231
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 288
A G + EE +D LEY S+ N + KK L +DHS I+Y PF K+
Sbjct: 168 PTA-GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKN 216
Query: 289 FYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEK 348
FY E EI +TP +RV G PRP ++A G ++++ ++K Y +
Sbjct: 217 FYNEHEEITNLTPQQLIDLRHKL-NLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQ 275
Query: 349 PTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPT 408
PTPIQ Q +P +SGRD+IGIAKTGSGKT AF+ P+L HI+DQ LE DGP+A+I+ PT
Sbjct: 276 PTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPT 335
Query: 409 RELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANS 468
RELC QI E K+F K+ LR V VYGG + EQ L+ GAEI+VCTPGR+ID +
Sbjct: 336 RELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK-- 393
Query: 469 GRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRI 528
+ TNL+RV+Y+V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR I
Sbjct: 394 -KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDI 452
Query: 529 LNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADS 588
L PI + G ++V Q V + + GSV++FV K+ NA+
Sbjct: 453 LIDPIRVVQGDIGEANEDVTQIVEILHSGSKWNWLTRRLVEFTSSGSVLLFVTKKANAEE 512
Query: 589 L 589
L
Sbjct: 513 L 513
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 765 (274.4 bits), Expect = 8.6e-75, P = 8.6e-75
Identities = 151/362 (41%), Positives = 229/362 (63%)
Query: 234 AKGELMEENQDGLEYSSEEEQEDLTSTAANL------ASKQKKELSKVDHSTIEYLPFRK 287
+K + + D SS++ + L+S + L K K+L +V+H I+Y+P +K
Sbjct: 625 SKNKKQNKGSDASFSSSDDTDDKLSSNKSELNYEENGMKKMNKKLLEVNHDEIDYIPIKK 684
Query: 288 DFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYE 347
+ YV+V EI M I V+GK CPRP++ + QCG+ KIL L+K+N++
Sbjct: 685 NIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFK 744
Query: 348 KPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSP 407
K IQ Q IPA+M GRD+I IA+TGSGKT++++ P++RH+L Q PL DGP++II++P
Sbjct: 745 KMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTP 804
Query: 408 TRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAAN 467
TREL +Q+ EAK + K++ + ++ VYGG+ I+ Q+ LK+G EI+V TPGR+ID+L +
Sbjct: 805 TRELSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTIS 864
Query: 468 SGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARR 527
+ +VTNL RV+++VLDEADR+ D+GFE Q+ I+ N R D+QT M SATFP ++ +A++
Sbjct: 865 NCKVTNLNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKK 924
Query: 528 ILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
+L KPIEI VG + + Q V + G + G V++FV+KQ AD
Sbjct: 925 LLYKPIEIIVGEKGKTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEAD 984
Query: 588 SL 589
L
Sbjct: 985 LL 986
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 765 (274.4 bits), Expect = 8.6e-75, P = 8.6e-75
Identities = 151/362 (41%), Positives = 229/362 (63%)
Query: 234 AKGELMEENQDGLEYSSEEEQEDLTSTAANL------ASKQKKELSKVDHSTIEYLPFRK 287
+K + + D SS++ + L+S + L K K+L +V+H I+Y+P +K
Sbjct: 625 SKNKKQNKGSDASFSSSDDTDDKLSSNKSELNYEENGMKKMNKKLLEVNHDEIDYIPIKK 684
Query: 288 DFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYE 347
+ YV+V EI M I V+GK CPRP++ + QCG+ KIL L+K+N++
Sbjct: 685 NIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFK 744
Query: 348 KPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSP 407
K IQ Q IPA+M GRD+I IA+TGSGKT++++ P++RH+L Q PL DGP++II++P
Sbjct: 745 KMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTP 804
Query: 408 TRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAAN 467
TREL +Q+ EAK + K++ + ++ VYGG+ I+ Q+ LK+G EI+V TPGR+ID+L +
Sbjct: 805 TRELSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTIS 864
Query: 468 SGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARR 527
+ +VTNL RV+++VLDEADR+ D+GFE Q+ I+ N R D+QT M SATFP ++ +A++
Sbjct: 865 NCKVTNLNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKK 924
Query: 528 ILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
+L KPIEI VG + + Q V + G + G V++FV+KQ AD
Sbjct: 925 LLYKPIEIIVGEKGKTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEAD 984
Query: 588 SL 589
L
Sbjct: 985 LL 986
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 174/419 (41%), Positives = 239/419 (57%)
Query: 176 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 231
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 291
A G + EE +D LEY S+ + T K L +DHS I+Y PF K+FY
Sbjct: 168 PTA-GVVQEEEEDNLEYDSDGNP--IAPT-----KKIIDPLPPIDHSEIDYPPFEKNFYN 219
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTP 351
E EI +TP +RV G PRP ++A G ++++ ++K Y +PTP
Sbjct: 220 EHEEITNLTPQQLIDLRHKL-NLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTP 278
Query: 352 IQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTREL 411
IQ Q +P +SGRD+IGIAKTGSGKT AF+ P+L HI+DQ LE DGP+A+I+ PTREL
Sbjct: 279 IQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTREL 338
Query: 412 CMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRV 471
C QI E K+F K+ LR V VYGG + EQ L+ GAEI+VCTPGR+ID + +
Sbjct: 339 CQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK---KA 395
Query: 472 TNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNK 531
TNL+RV+Y+V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR IL
Sbjct: 396 TNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 455
Query: 532 PIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENADSL 589
PI + G ++V Q V + + + GSV++FV K+ NA+ L
Sbjct: 456 PIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEEL 514
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 174/419 (41%), Positives = 239/419 (57%)
Query: 176 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 231
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQETYFRYMAEN 167
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 291
A G + EE +D LEY S+ + T K L +DHS I+Y PF K+FY
Sbjct: 168 PTA-GVVQEEEEDNLEYDSDGNP--IAPT-----KKIIDPLPPIDHSEIDYPPFEKNFYN 219
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTP 351
E EI +TP +RV G PRP ++A G ++++ ++K Y +PTP
Sbjct: 220 EHEEITNLTPQQLIDLRHKL-NLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTP 278
Query: 352 IQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTREL 411
IQ Q +P +SGRD+IGIAKTGSGKT AF+ P+L HI+DQ LE DGP+A+I+ PTREL
Sbjct: 279 IQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTREL 338
Query: 412 CMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRV 471
C QI E K+F K+ LR V VYGG + EQ L+ GAEI+VCTPGR+ID + +
Sbjct: 339 CQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK---KA 395
Query: 472 TNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNK 531
TNL+RV+Y+V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR IL
Sbjct: 396 TNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 455
Query: 532 PIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENADSL 589
PI + G ++V Q V + + + GSV++FV K+ NA+ L
Sbjct: 456 PIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEEL 514
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 726 (260.6 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 140/323 (43%), Positives = 221/323 (68%)
Query: 235 KGELMEENQDGLEY--SSEEEQEDLT--STAANLAS-KQKKELSKVDHSTIEYLPFRKDF 289
+G++++ E + +E+ ED T S A +A K KK + ++ +S E PF+K+F
Sbjct: 159 RGDILDVEDQLFELGGTDDEDVEDNTDNSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNF 218
Query: 290 YVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDAL-KKQNYEK 348
Y+E ++ M+ I++KG GCP+P+ W+Q G+S + + +K ++
Sbjct: 219 YIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGS 278
Query: 349 PTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD-GPMAIIMSP 407
TPIQ+QA+PAIMSGRD+IGI+KTGSGKT++++LPLLR + Q PL + + GPM +I++P
Sbjct: 279 LTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAP 338
Query: 408 TRELCMQIGKEAKKFTKS-LGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAA 466
TREL +QI +E KFT++ +R VC GG+ + +QI++LKRG EI+V TPGR ID+L
Sbjct: 339 TRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTL 398
Query: 467 NSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALAR 526
N G++ + +R+T++V+DEADR+FD+GFEPQ+ +I+ VRPD+Q V+FSATFP ++ + A
Sbjct: 399 NDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAV 458
Query: 527 RILNKPIEIQVGGRSVVCKEVEQ 549
R+L+ PI I + + +V + V+Q
Sbjct: 459 RVLHSPISITINSKGMVNENVKQ 481
Score = 44 (20.5 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 177 EEDIDPLDAFMQGVHEEMRKVNK 199
+ + DPLD FM + EE +K
Sbjct: 132 DNEKDPLDEFMTSLKEEKMSNSK 154
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 178/422 (42%), Positives = 240/422 (56%)
Query: 173 GKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXE 232
G + ED DPLDAFM V ++ K + V D S S+ +
Sbjct: 108 GGSDSED-DPLDAFMAEVEDQAAK-DDGQVRVCHDYISI-SFSR----GIRDDIEEEDDQ 160
Query: 233 KAKGELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 288
+A M EN GL EEE+ D S +A KK L +DHS I+Y PF K+
Sbjct: 161 EAYFRYMAENPTAGLTQEEEEEEVDYDSDGNPIAPTTKKIIMPLPPIDHSEIDYSPFEKN 220
Query: 289 FYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEK 348
FY E EI+ +T ++V G P+P ++A G ++++ ++K Y +
Sbjct: 221 FYNEHEEISSLT-GAEVVELRRKLNLKVSGAAPPKPATSFAHFGFDEQLMHQIRKSEYTQ 279
Query: 349 PTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPT 408
PTPIQ Q +P +SGRD IGIAKTGSGKT AF+ P+L HI+DQ LE +GP+A+I+ PT
Sbjct: 280 PTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEPGEGPIAVIVCPT 339
Query: 409 RELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANS 468
RELC QI E K+F K+ GLR V VYGG + EQ L+ GAEI+VCTPGR+ID +
Sbjct: 340 RELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK-- 397
Query: 469 GRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRI 528
+ T+L+RVT++V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR I
Sbjct: 398 -KATSLQRVTFLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDI 456
Query: 529 LNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENAD 587
L PI + G +++ Q V V + + GSV+VFV K+ N +
Sbjct: 457 LVDPIRVVQGDIGEANEDITQIVEVLQSGQDKWGWLTRRLVEFTSAGSVLVFVTKKANCE 516
Query: 588 SL 589
L
Sbjct: 517 EL 518
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 164/423 (38%), Positives = 234/423 (55%)
Query: 177 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA-DSGSKPAXXXXXXXXXXXXXEK-- 233
+++IDPLDAFM+ V+ + N ++ + + S +K
Sbjct: 148 DDEIDPLDAFMENVNAQAAIDNSKSIEKGQQQQQSLKSKRDDIDNEDDEEIFYKLRQKQL 207
Query: 234 AKGELMEENQDGLEYSSEEEQE---DLTSTAANLASKQKK---ELSKVDHSTIEYLPFRK 287
A ++ D ++YSS ++ + D + N SK K+ L +DHS EY+ F K
Sbjct: 208 ANKSSKQQQDDDVDYSSLDDDDGYFDDEESLKNGQSKGKRIIEPLPPIDHSKEEYIEFNK 267
Query: 288 DFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYE 347
FY E P+IA +T IR+ G P+ ++ G +L A+ KQ+ E
Sbjct: 268 IFYEEHPDIANLTEEQVFEIRKNLD-IRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIE 326
Query: 348 KPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSP 407
PTPIQ QAIP +SGRDLI IAKTGSGKT F+ P + HI+DQP LE+ DGP+A+ ++P
Sbjct: 327 TPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFLAP 386
Query: 408 TRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAAN 467
TREL QI E K++K L+ +YGG +Q ELK G EIIV TPGR+IDM+
Sbjct: 387 TRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKL- 445
Query: 468 SGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARR 527
+ T L RV+Y+VLDEAD+MFD GF PQV+ I+++VRPDRQT++FSATF +E AR
Sbjct: 446 --KATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFKPNVEEFART 503
Query: 528 ILNKPIEIQVGGRSVVCKEVEQHV-IVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENA 586
IL+ PI+I +G ++ Q V ++ + QGSV++FV +
Sbjct: 504 ILSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGSVLIFVSTKVAV 563
Query: 587 DSL 589
+ L
Sbjct: 564 EQL 566
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 160/419 (38%), Positives = 241/419 (57%)
Query: 177 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX-EKAK 235
+++ D LDAFM G+ ++ K + D K P+ +++
Sbjct: 116 DDEEDELDAFMAGIEKQASSDKKVSEQKEKDRKEGKDTEDPSKKGLGRADIDEEDMQESL 175
Query: 236 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 292
+ MEE ++ ++ +++EQ + N+ KK L +DHS I+Y F K+FY E
Sbjct: 176 FKFMEEYKE--KHENDDEQLEYDEDG-NIIWSWKKVIDPLPDIDHSQIQYQKFNKNFYEE 232
Query: 293 VPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPI 352
+I R+ +RV G PRP+ ++A K +++A++K YE+PTPI
Sbjct: 233 HEDIKRLH-YMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPI 291
Query: 353 QAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELC 412
QA AIP+ +SGRD++GIAKTGSGKT A++ P + HI+DQP L+ +GP+A+I+ PTREL
Sbjct: 292 QAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELA 351
Query: 413 MQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKR-GAEIIVCTPGRMIDMLAANSGRV 471
+Q+ +EAKKF K + +C YGG EQ +EL+ GAE++VCTPGR+ID++ +
Sbjct: 352 IQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGA--- 408
Query: 472 TNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNK 531
TN R T++V DEADRMFDMGFE QV I D+VRPDRQ +MFSATF +++E LAR L
Sbjct: 409 TNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARDALVD 468
Query: 532 PIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENADSL 589
P+ I G ++EQ V V + + G V++FV K+ +++ +
Sbjct: 469 PVRIVQGEVGEANADIEQKVFVMQNQDVKLHWLIRNLVEFASLGKVLIFVTKKLDSEDV 527
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 167/423 (39%), Positives = 231/423 (54%)
Query: 176 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 231
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFR-K 287
A G + EE +D LEY S+ N + KK L +DHS ++ F K
Sbjct: 168 PTA-GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSELDRNYFEIK 216
Query: 288 DFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYE 347
Y E + RV G PRP ++A G ++++ ++K Y
Sbjct: 217 IIYNTKDECIDASNLELINTLHFIS--RVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYT 274
Query: 348 KPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSP 407
+PTPIQ Q +P +SGRD+IGIAKTGSGKT AF+ P+L HI+DQ LE DGP+A+I+ P
Sbjct: 275 QPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCP 334
Query: 408 TRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAAN 467
TRELC QI E K+F K+ LR V VYGG + EQ L+ GAEI+VCTPGR+ID +
Sbjct: 335 TRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKK- 393
Query: 468 SGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARR 527
+ TNL+RV+Y+V DEADRMFDMGFE QV I +VRPDRQT++FSATF +++E LAR
Sbjct: 394 --KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 528 ILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI-YQDQGSVIVFVDKQENA 586
IL PI + G ++V Q V + + + GSV++FV K+ NA
Sbjct: 452 ILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANA 511
Query: 587 DSL 589
+ L
Sbjct: 512 EEL 514
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 128/307 (41%), Positives = 196/307 (63%)
Query: 284 PFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKK 343
PF K+FYVE P +A MT I V+GK P+P+K++ G +L+ +KK
Sbjct: 58 PFEKNFYVESPAVAAMTDTEVEEYRKLRE-ITVEGKDIPKPVKSFRDVGFPDYVLEEVKK 116
Query: 344 QNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAI 403
+ +PTPIQ+Q P M GRDLIGIA+TGSGKT++++LP + H+ QP L DGP+ +
Sbjct: 117 AGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVL 176
Query: 404 IMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDM 463
+++PTREL +QI +EA KF S ++ C+YGG Q+ +L++G EI++ TPGR+IDM
Sbjct: 177 VLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
Query: 464 LAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 523
+ +N+ TNLRRVTY+VLDEADRM DMGF+PQ+ +I+ ++RPDRQT+ +SAT+P+++E
Sbjct: 237 MESNN---TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQ 293
Query: 524 LARRILNKPIEIQVGGRSVVC-KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDK 582
L+++ L P ++ +G + + + Q V V D ++VF+D
Sbjct: 294 LSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDT 353
Query: 583 QENADSL 589
++ D +
Sbjct: 354 KKGCDQI 360
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 129/258 (50%), Positives = 179/258 (69%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKG-KGCPRPIKTWAQCGVSKKILDA 340
LP F K+FYVE PE+AR+TP I ++G +GCP+P+ + QC + ++DA
Sbjct: 46 LPKFEKNFYVEHPEVARLTPYEVEELRRKKE-ITIRGMEGCPKPVFAFHQCSFPQYVMDA 104
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGP 400
L QN+ +PTPIQ Q P +SGRD++GIA+TGSGKT+A++LP + HI QP LE DGP
Sbjct: 105 LMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 164
Query: 401 MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRM 460
+ ++++PTREL Q+ + A + K L+ C+YGG QI +L+RG EI + TPGR+
Sbjct: 165 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 224
Query: 461 IDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQ 520
ID L A G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P++
Sbjct: 225 IDFLEA--GK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 281
Query: 521 MEALARRILNKPIEIQVG 538
+ LA L ++I VG
Sbjct: 282 VRQLAEDFLQDYVQINVG 299
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 134/325 (41%), Positives = 196/325 (60%)
Query: 269 KKELSKVDHSTIEY---LPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPI 325
K+EL V + + F K+FYVE P + MT I V+G+ P+P+
Sbjct: 106 KRELDSVSLPKQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERD-ISVEGRDVPKPM 164
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
K + IL+A+ K + +PTPIQAQ P + GRDLIGIA+TGSGKT+A++LP L
Sbjct: 165 KMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL 224
Query: 386 RHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISE 445
H+ QP L + DGP+ +I++PTREL +QI +E++KF G+R C+YGG QI +
Sbjct: 225 VHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRD 284
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVR 505
L+RG EI++ TPGR+IDML TNL+RVTY+VLDEADRM DMGFEPQ+ +I+ +R
Sbjct: 285 LRRGVEIVIATPGRLIDMLECQH---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIR 341
Query: 506 PDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKE-VEQHVIVXXXXXXXXXXX 564
PDRQT+++SAT+PR++E LAR+ L P + +G + + + Q + +
Sbjct: 342 PDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLL 401
Query: 565 XXXGIYQDQGSVIVFVDKQENADSL 589
D +++FV+ + D +
Sbjct: 402 TLLKQLMDGSKILIFVETKRGCDQV 426
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 133/328 (40%), Positives = 206/328 (62%)
Query: 263 NLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCP 322
N ++ K L+ +D TI +PF K+FY E +I++++ ++G+ P
Sbjct: 50 NNSNNYGKNLAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVP 109
Query: 323 RPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVL 382
+P+ + + G ++ +LK N PTPIQ Q P +SG+D+IG A+TGSGKT+AF+L
Sbjct: 110 KPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFIL 169
Query: 383 PLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQ 442
P HIL QP L+ DGP+ ++++PTREL QI +E KF+ +R C YGG S Q
Sbjct: 170 PAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQ 229
Query: 443 ISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIID 502
I LK+G I++ PGR+ID+L N VTNL RVTY+VLDEAD+M DMGFE Q+ +I+D
Sbjct: 230 IYALKQGVHILIACPGRLIDLLEQN---VTNLMRVTYLVLDEADKMLDMGFELQIRKIVD 286
Query: 503 NVRPDRQTVMFSATFPRQMEALARRILNK-PIEIQVGGRSVV-CKEVEQHV-IVXXXXXX 559
+RPDRQT+M+SAT+P++++ALA+ + + PI++ VG ++ C+ ++Q + ++
Sbjct: 287 QIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKI 346
Query: 560 XXXXXXXXGIYQDQGSVIVFVDKQENAD 587
I++D +IVFV+ ++NAD
Sbjct: 347 GNLKSLLQRIFKDNDRIIVFVETKKNAD 374
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 133/328 (40%), Positives = 206/328 (62%)
Query: 263 NLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCP 322
N ++ K L+ +D TI +PF K+FY E +I++++ ++G+ P
Sbjct: 50 NNSNNYGKNLAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVP 109
Query: 323 RPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVL 382
+P+ + + G ++ +LK N PTPIQ Q P +SG+D+IG A+TGSGKT+AF+L
Sbjct: 110 KPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFIL 169
Query: 383 PLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQ 442
P HIL QP L+ DGP+ ++++PTREL QI +E KF+ +R C YGG S Q
Sbjct: 170 PAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQ 229
Query: 443 ISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIID 502
I LK+G I++ PGR+ID+L N VTNL RVTY+VLDEAD+M DMGFE Q+ +I+D
Sbjct: 230 IYALKQGVHILIACPGRLIDLLEQN---VTNLMRVTYLVLDEADKMLDMGFELQIRKIVD 286
Query: 503 NVRPDRQTVMFSATFPRQMEALARRILNK-PIEIQVGGRSVV-CKEVEQHV-IVXXXXXX 559
+RPDRQT+M+SAT+P++++ALA+ + + PI++ VG ++ C+ ++Q + ++
Sbjct: 287 QIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKI 346
Query: 560 XXXXXXXXGIYQDQGSVIVFVDKQENAD 587
I++D +IVFV+ ++NAD
Sbjct: 347 GNLKSLLQRIFKDNDRIIVFVETKKNAD 374
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 140/321 (43%), Positives = 194/321 (60%)
Query: 272 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQC 331
L K D +PF+KDFY E E R I V G P+P+ T+ +
Sbjct: 69 LVKKDWKNETLIPFQKDFYKE-HENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEA 127
Query: 332 GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQ 391
G +L +K+ +E PTPIQ QA P MSGRD++GI+ TGSGKT+++ LP + HI Q
Sbjct: 128 GFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQ 187
Query: 392 PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAE 451
P L DGP+ ++++PTREL +QI +E KF KS +R CVYGG QI +L RG E
Sbjct: 188 PLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVE 247
Query: 452 IIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV 511
I + TPGR++DML +N TNLRRVTY+VLDEADRM DMGFEPQ+ +I+D +RPDRQTV
Sbjct: 248 ICIATPGRLLDMLDSNK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTV 304
Query: 512 MFSATFPRQMEALARRILNKPIEIQVGGRSVVCKE-VEQHV-IVXXXXXXXXXXXXXXGI 569
MFSAT+P++++ LAR LN I++ VG + ++Q V +V +
Sbjct: 305 MFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEV 364
Query: 570 YQDQGS-VIVFVDKQENADSL 589
+D+ + V++F + AD +
Sbjct: 365 LKDRDNKVLIFTGTKRVADDI 385
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 136/314 (43%), Positives = 189/314 (60%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
+E LP F K+FY E P++A + + VKG P PI T+ + G +L
Sbjct: 81 LEQLPKFEKNFYSEHPDVAARSDRDIEQFRKENE-MTVKGHDIPHPITTFDEAGFPDYVL 139
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
+K Q + KPTPIQ Q P +SGRD+IGIA TGSGKT+++ LP + HI QP L+ D
Sbjct: 140 QEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGD 199
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL +QI E KF KS +R CVYGG QI +L RG EI + TPG
Sbjct: 200 GPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPG 259
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+IDML A G+ TNL+RVTY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 260 RLIDMLEA--GK-TNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 316
Query: 519 RQMEALARRILNKPIEIQVGGRSVVCKE-VEQ--HVIVXXXXXXXXXXXXXXGIYQDQGS 575
++++ L R LN PI++ +G + + Q VI + +
Sbjct: 317 KEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNK 376
Query: 576 VIVFVDKQENADSL 589
++VF + D +
Sbjct: 377 ILVFASTKRTCDEI 390
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 134/309 (43%), Positives = 188/309 (60%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDAL 341
LP F K+FY+E P++++ T + VKG+ P PI + Q ++ +
Sbjct: 341 LPRFEKNFYLEHPDVSKFTQEEIEKFRASFQ-MTVKGREVPPPIMQFTQAPFPGYLMKEI 399
Query: 342 KKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPM 401
+ PTPIQ+QA P + GRD+IG+AKTGSGKT+AF+LP + HI QP L E DGP+
Sbjct: 400 IGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPI 459
Query: 402 AIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMI 461
++++PTREL +QI +E KF + + CVYGG Q++ LK+G EI++ TPGR+I
Sbjct: 460 VLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLI 519
Query: 462 DMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQM 521
D+L SG+ TNLRRVTY+VLDEADRM DMGFEPQ+ +II +RPDRQT+MFSAT+P+++
Sbjct: 520 DIL--ESGK-TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEV 576
Query: 522 EALARRILNKPIEIQVGGRSVVCKE-VEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFV 580
+ALA L I++ +G + V Q V V G VIVF
Sbjct: 577 QALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSVGRDEKVIVFA 636
Query: 581 DKQENADSL 589
+ ++ D L
Sbjct: 637 ETRKGVDDL 645
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 138/322 (42%), Positives = 196/322 (60%)
Query: 272 LSKVDHSTIEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQ 330
L K D ++ LP F K FY E P++ + + V+G+ PRP++T+ +
Sbjct: 87 LKKQDWD-LDTLPKFEKSFYKEHPDVTARSQREVDEFRKKCE-MTVQGRDVPRPVETFDE 144
Query: 331 CGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILD 390
G + +L +K Q +EKPT IQ+Q P +SGRD++GIA+TGSGKT+++ LP + HI
Sbjct: 145 AGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINA 204
Query: 391 QPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGA 450
QP L DGP+ +I++PTREL +QI E KF KS +R CVYGG QI +L RG
Sbjct: 205 QPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGV 264
Query: 451 EIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQT 510
E+ + TPGR+IDML A GR TNLRRVTY+VLDEADRM DMGFEPQ+ +II +RPDRQT
Sbjct: 265 EVCIATPGRLIDMLEA--GR-TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQT 321
Query: 511 VMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKE-VEQHV-IVXXXXXXXXXXXXXXG 568
M+SAT+P+++ LA LN I++ +G + + Q V ++
Sbjct: 322 CMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEK 381
Query: 569 IYQDQGS-VIVFVDKQENADSL 589
I +++G+ +VF + AD +
Sbjct: 382 IMENRGNKCLVFTGTKRIADEI 403
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 124/263 (47%), Positives = 179/263 (68%)
Query: 277 HSTIEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSK 335
H ++ LP F K+FY E P++AR + I VKG+ P+PI + + K
Sbjct: 47 HWNLDELPKFEKNFYQENPDVARRSAQEVEHYRRSKE-ITVKGRDGPKPIVKFHEANFPK 105
Query: 336 KILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLE 395
++D + KQN+ PTPIQAQ P +SG+D++GIA+TGSGKT++++LP + HI QP LE
Sbjct: 106 YVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLE 165
Query: 396 ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVC 455
DGP+ ++++PTREL Q+ + A ++ K+ ++ C+YGG QI +L+RG EI +
Sbjct: 166 HGDGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIA 225
Query: 456 TPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSA 515
TPGR+ID L A G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SA
Sbjct: 226 TPGRLIDFLEA--GK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 282
Query: 516 TFPRQMEALARRILNKPIEIQVG 538
T+P+++ LA L + I+I VG
Sbjct: 283 TWPKEVRQLAEDFLKEYIQINVG 305
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 123/260 (47%), Positives = 176/260 (67%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E PE+ M+ I V+G GCP+P+ + Q + ++
Sbjct: 49 LDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKRE-ITVRGSGCPKPVTNFHQAQFPQYVM 107
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
D L +QN+++PT IQAQ P +SGRD++GIA+TGSGKT+A++LP + HI QP LE D
Sbjct: 108 DVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD 167
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A + KS ++ CVYGG QI +L+RG EI + TPG
Sbjct: 168 GPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPG 227
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 228 RLIDFLEV--GK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 284
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L ++I +G
Sbjct: 285 KEVRQLAEDFLQDYVQINIG 304
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 125/258 (48%), Positives = 173/258 (67%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKG-CPRPIKTWAQCGVSKKILDA 340
LP F K+FYVE PE+AR+TP I V+G CP+P+ + + ++D
Sbjct: 48 LPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMDV 106
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGP 400
L Q++ +PTPIQ Q P +SGRD++GIA+TGSGKT+A++LP + HI QP LE DGP
Sbjct: 107 LMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 166
Query: 401 MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRM 460
+ ++++PTREL Q+ + A + K L+ C+YGG QI +L+RG EI + TPGR+
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 461 IDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQ 520
ID L SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P++
Sbjct: 227 IDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 521 MEALARRILNKPIEIQVG 538
+ LA L +I VG
Sbjct: 284 VRQLAEDFLRDYTQINVG 301
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 125/258 (48%), Positives = 173/258 (67%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKG-CPRPIKTWAQCGVSKKILDA 340
LP F K+FYVE PE+AR+TP I V+G CP+P+ + + ++D
Sbjct: 48 LPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMDV 106
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGP 400
L Q++ +PTPIQ Q P +SGRD++GIA+TGSGKT+A++LP + HI QP LE DGP
Sbjct: 107 LMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 166
Query: 401 MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRM 460
+ ++++PTREL Q+ + A + K L+ C+YGG QI +L+RG EI + TPGR+
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 461 IDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQ 520
ID L SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P++
Sbjct: 227 IDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 521 MEALARRILNKPIEIQVG 538
+ LA L +I VG
Sbjct: 284 VRQLAEDFLRDYTQINVG 301
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 125/258 (48%), Positives = 173/258 (67%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKG-CPRPIKTWAQCGVSKKILDA 340
LP F K+FYVE PE+AR+TP I V+G CP+P+ + + ++D
Sbjct: 129 LPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMDV 187
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGP 400
L Q++ +PTPIQ Q P +SGRD++GIA+TGSGKT+A++LP + HI QP LE DGP
Sbjct: 188 LMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 247
Query: 401 MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRM 460
+ ++++PTREL Q+ + A + K L+ C+YGG QI +L+RG EI + TPGR+
Sbjct: 248 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 307
Query: 461 IDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQ 520
ID L SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P++
Sbjct: 308 IDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 364
Query: 521 MEALARRILNKPIEIQVG 538
+ LA L +I VG
Sbjct: 365 VRQLAEDFLRDYTQINVG 382
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 125/258 (48%), Positives = 173/258 (67%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKG-CPRPIKTWAQCGVSKKILDA 340
LP F K+FYVE PE+AR+TP I V+G CP+P+ + + ++D
Sbjct: 48 LPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMDV 106
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGP 400
L Q++ +PTPIQ Q P +SGRD++GIA+TGSGKT+A++LP + HI QP LE DGP
Sbjct: 107 LMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 166
Query: 401 MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRM 460
+ ++++PTREL Q+ + A + K L+ C+YGG QI +L+RG EI + TPGR+
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 461 IDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQ 520
ID L SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P++
Sbjct: 227 IDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 521 MEALARRILNKPIEIQVG 538
+ LA L +I VG
Sbjct: 284 VRQLAEDFLRDYTQINVG 301
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 125/258 (48%), Positives = 173/258 (67%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKG-CPRPIKTWAQCGVSKKILDA 340
LP F K+FYVE PE+AR+TP I V+G CP+P+ + + ++D
Sbjct: 127 LPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMDV 185
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGP 400
L Q++ +PTPIQ Q P +SGRD++GIA+TGSGKT+A++LP + HI QP LE DGP
Sbjct: 186 LMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 245
Query: 401 MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRM 460
+ ++++PTREL Q+ + A + K L+ C+YGG QI +L+RG EI + TPGR+
Sbjct: 246 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 305
Query: 461 IDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQ 520
ID L SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P++
Sbjct: 306 IDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 362
Query: 521 MEALARRILNKPIEIQVG 538
+ LA L +I VG
Sbjct: 363 VRQLAEDFLRDYTQINVG 380
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 125/258 (48%), Positives = 173/258 (67%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKG-CPRPIKTWAQCGVSKKILDA 340
LP F K+FYVE PE+AR+TP I V+G CP+P+ + + ++D
Sbjct: 127 LPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMDV 185
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGP 400
L Q++ +PTPIQ Q P +SGRD++GIA+TGSGKT+A++LP + HI QP LE DGP
Sbjct: 186 LMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 245
Query: 401 MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRM 460
+ ++++PTREL Q+ + A + K L+ C+YGG QI +L+RG EI + TPGR+
Sbjct: 246 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 305
Query: 461 IDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQ 520
ID L SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P++
Sbjct: 306 IDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 362
Query: 521 MEALARRILNKPIEIQVG 538
+ LA L +I VG
Sbjct: 363 VRQLAEDFLRDYTQINVG 380
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 125/258 (48%), Positives = 173/258 (67%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKG-CPRPIKTWAQCGVSKKILDA 340
LP F K+FYVE PE+AR+TP I V+G CP+P+ + + ++D
Sbjct: 129 LPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMDV 187
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGP 400
L Q++ +PTPIQ Q P +SGRD++GIA+TGSGKT+A++LP + HI QP LE DGP
Sbjct: 188 LMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 247
Query: 401 MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRM 460
+ ++++PTREL Q+ + A + K L+ C+YGG QI +L+RG EI + TPGR+
Sbjct: 248 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 307
Query: 461 IDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQ 520
ID L SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P++
Sbjct: 308 IDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 364
Query: 521 MEALARRILNKPIEIQVG 538
+ LA L +I VG
Sbjct: 365 VRQLAEDFLRDYTQINVG 382
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 125/258 (48%), Positives = 173/258 (67%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKG-CPRPIKTWAQCGVSKKILDA 340
LP F K+FYVE PE+AR+TP I V+G CP+P+ + + ++D
Sbjct: 48 LPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMDV 106
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGP 400
L Q++ +PTPIQ Q P +SGRD++GIA+TGSGKT+A++LP + HI QP LE DGP
Sbjct: 107 LMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 166
Query: 401 MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRM 460
+ ++++PTREL Q+ + A + K L+ C+YGG QI +L+RG EI + TPGR+
Sbjct: 167 ICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 226
Query: 461 IDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQ 520
ID L SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P++
Sbjct: 227 IDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 283
Query: 521 MEALARRILNKPIEIQVG 538
+ LA L +I VG
Sbjct: 284 VRQLAEDFLRDYTQINVG 301
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 130/273 (47%), Positives = 181/273 (66%)
Query: 268 QKKELSKVD-HSTIEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPI 325
Q +EL K + + LP F K+FYVE E R + + G P+PI
Sbjct: 54 QPQELIKPNWDEELPKLPTFEKNFYVE-HESVRDRSDSEIAQFRKENEMTISGHDIPKPI 112
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
T+ + G +L+ +K + ++KPT IQ Q P +SGRD++GIA TGSGKT+++ LP +
Sbjct: 113 TTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGI 172
Query: 386 RHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISE 445
HI QP L DGP+ ++++PTREL +QI E KF S +R CVYGG S+QI +
Sbjct: 173 VHINAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRD 232
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVR 505
L RG+EI++ TPGR+IDML G+ TNL+RVTY+VLDEADRM DMGFEPQ+ +I+D +R
Sbjct: 233 LSRGSEIVIATPGRLIDMLEI--GK-TNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIR 289
Query: 506 PDRQTVMFSATFPRQMEALARRILNKPIEIQVG 538
PDRQT+M+SAT+P++++ LA LN PI++QVG
Sbjct: 290 PDRQTLMWSATWPKEVKQLAADYLNDPIQVQVG 322
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 131/328 (39%), Positives = 199/328 (60%)
Query: 268 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKT 327
Q + VD S + PF+K+FY E P +A +P I V+G+ P PI+
Sbjct: 227 QDLPMRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYREEQE-ITVRGQ-VPNPIQD 282
Query: 328 WAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRH 387
+++ + ++ +++Q Y+ PT IQAQ P MSG + +GIAKTGSGKT+ ++LP + H
Sbjct: 283 FSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVH 342
Query: 388 ILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELK 447
I +Q PL+ DGP+A++++PTREL QI + A +F S +R CV+GG Q+ +L+
Sbjct: 343 INNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQ 402
Query: 448 RGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPD 507
RG EI++ TPGR+ID L+A S TNL+R TY+VLDEADRM DMGFEPQ+ +I+ +RPD
Sbjct: 403 RGCEIVIATPGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPD 459
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKE-VEQHV-IVXXXXXXXXXXXX 565
RQT+M+SAT+P++++ LA L I+I +G + + Q V +
Sbjct: 460 RQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTL 519
Query: 566 XXGIY---QDQGSVIVFVDKQENADSLL 590
IY + G +I+FV+ + D+L+
Sbjct: 520 LSDIYDTSESPGKIIIFVETKRRVDNLV 547
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 115/260 (44%), Positives = 176/260 (67%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E P++ R T + V+G CP+PI + + ++
Sbjct: 36 LDELPKFEKNFYQEHPDVVRRTAQEVEQYRSSKE-VTVRGHNCPKPIINFYEANFPANVM 94
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
+ +++QN+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE D
Sbjct: 95 EVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGD 154
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A +++++ L+ C+YGG QI +L+RG EI + TPG
Sbjct: 155 GPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPG 214
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L A G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 215 RLIDFLEA--GK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 271
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L + + I +G
Sbjct: 272 KEVRQLAEDFLKEYVHINIG 291
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 115/260 (44%), Positives = 176/260 (67%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E P++ R T + V+G CP+PI + + ++
Sbjct: 44 LDELPKFEKNFYQEHPDVVRRTAQEVEQYRSSKE-VTVRGHNCPKPIINFYEANFPANVM 102
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
+ +++QN+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE D
Sbjct: 103 EVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGD 162
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A +++++ L+ C+YGG QI +L+RG EI + TPG
Sbjct: 163 GPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPG 222
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L A G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 223 RLIDFLEA--GK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 279
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L + + I +G
Sbjct: 280 KEVRQLAEDFLKEYVHINIG 299
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 117/260 (45%), Positives = 173/260 (66%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E P++AR T I V+G CP+P+ + + ++
Sbjct: 48 LDELPKFEKNFYQEHPDLARRTAQEVETYRRSKE-ITVRGHNCPKPVLNFYEANFPANVM 106
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
D + +QN+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE D
Sbjct: 107 DVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGD 166
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A ++ ++ L+ C+YGG QI +L+RG EI + TPG
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPG 226
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 227 RLIDFLEC--GK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L I I +G
Sbjct: 284 KEVRQLAEDFLKDYIHINIG 303
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 117/260 (45%), Positives = 173/260 (66%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E P++AR T I V+G CP+P+ + + ++
Sbjct: 105 LDELPKFEKNFYQEHPDLARRTAQEVETYRRSKE-ITVRGHNCPKPVLNFYEANFPANVM 163
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
D + +QN+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE D
Sbjct: 164 DVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGD 223
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A ++ ++ L+ C+YGG QI +L+RG EI + TPG
Sbjct: 224 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPG 283
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 284 RLIDFLEC--GK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 340
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L I I +G
Sbjct: 341 KEVRQLAEDFLKDYIHINIG 360
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 117/260 (45%), Positives = 173/260 (66%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E P++AR T I V+G CP+P+ + + ++
Sbjct: 48 LDELPKFEKNFYQEHPDLARRTAQEVETYRRSKE-ITVRGHNCPKPVLNFYEANFPANVM 106
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
D + +QN+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE D
Sbjct: 107 DVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGD 166
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A ++ ++ L+ C+YGG QI +L+RG EI + TPG
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPG 226
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 227 RLIDFLEC--GK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L I I +G
Sbjct: 284 KEVRQLAEDFLKDYIHINIG 303
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 117/260 (45%), Positives = 173/260 (66%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E P++AR T I V+G CP+P+ + + ++
Sbjct: 48 LDELPKFEKNFYQEHPDLARRTAQEVETYRRSKE-ITVRGHNCPKPVLNFYEANFPANVM 106
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
D + +QN+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE D
Sbjct: 107 DVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGD 166
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A ++ ++ L+ C+YGG QI +L+RG EI + TPG
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPG 226
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 227 RLIDFLEC--GK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L I I +G
Sbjct: 284 KEVRQLAEDFLKDYIHINIG 303
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 117/260 (45%), Positives = 173/260 (66%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E P++AR T I V+G CP+P+ + + ++
Sbjct: 48 LDELPKFEKNFYQEHPDLARRTAQEVETYRRSKE-ITVRGHNCPKPVLNFYEANFPANVM 106
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
D + +QN+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE D
Sbjct: 107 DVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGD 166
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A ++ ++ L+ C+YGG QI +L+RG EI + TPG
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPG 226
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 227 RLIDFLEC--GK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L I I +G
Sbjct: 284 KEVRQLAEDFLKDYIHINIG 303
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 117/260 (45%), Positives = 173/260 (66%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E P++AR T I V+G CP+P+ + + ++
Sbjct: 48 LDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKE-ITVRGHNCPKPVLNFYEANFPANVM 106
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
D + +QN+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE D
Sbjct: 107 DVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGD 166
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A ++ ++ L+ C+YGG QI +L+RG EI + TPG
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPG 226
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 227 RLIDFLEC--GK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L I I +G
Sbjct: 284 KEVRQLAEDFLKDYIHINIG 303
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 117/260 (45%), Positives = 173/260 (66%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E P++AR T I V+G CP+P+ + + ++
Sbjct: 48 LDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKE-ITVRGHNCPKPVLNFYEANFPANVM 106
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
D + +QN+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE D
Sbjct: 107 DVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGD 166
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A ++ ++ L+ C+YGG QI +L+RG EI + TPG
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPG 226
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 227 RLIDFLEC--GK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L I I +G
Sbjct: 284 KEVRQLAEDFLKDYIHINIG 303
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 115/254 (45%), Positives = 169/254 (66%)
Query: 285 FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQ 344
F K+FY E P++AR T I V+G CP+P+ + + ++D + +Q
Sbjct: 54 FEKNFYQEHPDLARRTAQEVETYRRSKE-ITVRGHNCPKPVLNFYEANFPANVMDVIARQ 112
Query: 345 NYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAII 404
N+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE DGP+ ++
Sbjct: 113 NFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLV 172
Query: 405 MSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDML 464
++PTREL Q+ + A ++ ++ L+ C+YGG QI +L+RG EI + TPGR+ID L
Sbjct: 173 LAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFL 232
Query: 465 AANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEAL 524
G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P+++ L
Sbjct: 233 EC--GK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 289
Query: 525 ARRILNKPIEIQVG 538
A L I I +G
Sbjct: 290 AEDFLKDYIHINIG 303
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 125/268 (46%), Positives = 173/268 (64%)
Query: 272 LSKVDHSTIEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQ 330
L K D I LP F K FY E P++ + + V+G P+P++T+ +
Sbjct: 72 LQKQDWD-INALPKFEKHFYKEHPDVTNRSQAEVDKFRREHS-MAVQGSDVPKPVETFDE 129
Query: 331 CGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILD 390
G + ++D +K Q + PT IQ+Q P +SGRD++GIA+TGSGKT+ + LP + HI
Sbjct: 130 AGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINA 189
Query: 391 QPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGA 450
QP L DGP+ +I++PTREL +QI E KF KS +R CVYGG QI +L RG
Sbjct: 190 QPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGV 249
Query: 451 EIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQT 510
E+ + TPGR+IDML SG+ TNLRRVTY+VLDEADRM DMGFEPQ+ +II +RPDRQT
Sbjct: 250 EVCIATPGRLIDML--ESGK-TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQT 306
Query: 511 VMFSATFPRQMEALARRILNKPIEIQVG 538
+M+SAT+P+++ +A L I++ +G
Sbjct: 307 LMWSATWPKEVRNMAADFLQDFIQVNIG 334
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 116/260 (44%), Positives = 172/260 (66%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKIL 338
++ LP F K+FY E P++AR T I V+G CP+P+ + + ++
Sbjct: 48 LDELPKFEKNFYQEHPDLARRTAQEVETYRRSKE-ITVRGHNCPKPVLNFYEANFPANVM 106
Query: 339 DALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD 398
D + +QN+ +PT IQAQ P +SG D++G+A+TGSGKT++++LP + HI QP LE D
Sbjct: 107 DVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGD 166
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP+ ++++PTREL Q+ + A ++ ++ L+ C+YGG QI +L+RG E + TPG
Sbjct: 167 GPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVENCIATPG 226
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 518
R+ID L G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P
Sbjct: 227 RLIDFLEC--GK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 519 RQMEALARRILNKPIEIQVG 538
+++ LA L I I +G
Sbjct: 284 KEVRQLAEDFLKDYIHINIG 303
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 119/278 (42%), Positives = 175/278 (62%)
Query: 265 ASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRP 324
+S L K+ S + PFRK+FY + T I +KG P P
Sbjct: 97 SSNHGAHLPKIVWSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNE-ITIKGDQVPTP 155
Query: 325 IKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPL 384
+ + G +++ ++KQ + KPT IQAQ P MSGRDL+G+A+TGSGKT+A+VLP
Sbjct: 156 SIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPA 215
Query: 385 LRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQIS 444
+ HI +QP LE DGP+A++++PTREL QI + A +F + +R C++GG +Q
Sbjct: 216 VVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQAR 275
Query: 445 ELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNV 504
+L+RG EI++ TPGR+ID L + T+L+R TY+VLDEADRM DMGFEPQ+ +I+ +
Sbjct: 276 DLERGVEIVIATPGRLIDFLERGT---TSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQI 332
Query: 505 RPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSV 542
RPDRQ +M+SAT+P+++ LA LN I++ +G S+
Sbjct: 333 RPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSL 370
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 576 (207.8 bits), Expect = 3.3e-55, P = 3.3e-55
Identities = 122/303 (40%), Positives = 182/303 (60%)
Query: 242 NQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTP 301
N L S+EE+ ++ A + L K +E PF KDFY P +
Sbjct: 159 NAAALGMLSKEERAEIQREKAK---NPGRNLVKPKWENLE--PFLKDFYNIHPNTLAKSE 213
Query: 302 XXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIM 361
I V G P P+ ++ + + +++ +K+Q + KPT IQ+Q P +
Sbjct: 214 QQVAEIRRELE-ITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIAL 272
Query: 362 SGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKK 421
SGRDL+GIA+TGSGKT+A++LP + HI +QPP+ +GP+A++++PTREL QI +
Sbjct: 273 SGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGEGPIALVLAPTRELAQQIQSVVRD 332
Query: 422 FTKSLG--LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 479
+ +R C++GG+ Q +L RG E+I+ TPGR+ID L R TNL+R TY
Sbjct: 333 YGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFL---ENRNTNLQRCTY 389
Query: 480 IVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGG 539
+VLDEADRM DMGFEPQ+ +II+ +RPDRQ VM+SAT+P++++ALA LN I+I +G
Sbjct: 390 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGS 449
Query: 540 RSV 542
++
Sbjct: 450 MNL 452
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 482 (174.7 bits), Expect = 1.9e-54, Sum P(3) = 1.9e-54
Identities = 95/192 (49%), Positives = 130/192 (67%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KG P PI+TW + + ++IL+A+++ YEKP+PIQ Q+IP ++GRD++GIA+TG
Sbjct: 401 ISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETG 460
Query: 374 SGKTVAFVLPLLRHILDQPPLE---ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRV 430
SGKT AFV+P+L +I QP L E DGP A++M+PTREL QI KE + F + G RV
Sbjct: 461 SGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRV 520
Query: 431 VCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFD 490
V + GG I +Q ++ +G EII+ TPGR+ D L R L + YIVLDEAD M D
Sbjct: 521 VSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEK---RYLVLNQCNYIVLDEADMMID 577
Query: 491 MGFEPQVMRIID 502
+GFEPQV ++D
Sbjct: 578 LGFEPQVTSVLD 589
Score = 89 (36.4 bits), Expect = 1.9e-54, Sum P(3) = 1.9e-54
Identities = 23/90 (25%), Positives = 42/90 (46%)
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXX 567
R T++FSAT P +E L+++ L +P I +G V + Q VI
Sbjct: 616 RTTILFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQL 675
Query: 568 GIYQDQGSVIVFVDKQENADSLLFHSMDPC 597
+I+FV+K+++ D ++ ++ C
Sbjct: 676 IKDGPPPPIIIFVNKKKHCD-IIAPVLEEC 704
Score = 41 (19.5 bits), Expect = 1.9e-54, Sum P(3) = 1.9e-54
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 179 DIDPLDAFMQG-VHEEMRK 196
++DPL+ F +G + EE +K
Sbjct: 59 NVDPLEFFSKGGLKEEQKK 77
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 132/372 (35%), Positives = 203/372 (54%)
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 291
++ KG E N E S ++ DLT + + K ++ + P K+FY
Sbjct: 181 DRYKGNSYEFNPTSSE--SNKDNGDLTGII-DWEALNKASIAATAARWSKCPPLTKNFYK 237
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRV-------KGKGCP---RPIKTWAQCGVS-KKILDA 340
E PE+A +T I V +G+ P P+ T+ QC +L+
Sbjct: 238 EAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYPDMLEE 297
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP-PLEETDG 399
+ K + KP+PIQ+QA P ++ G D+IGIA+TG+GKT+AF+LP + H Q P G
Sbjct: 298 ITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGG 357
Query: 400 PMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGR 459
++++PTREL +QI E KK++ G++ VCVYGG + QIS+L+RGAEII+CTPGR
Sbjct: 358 ANVLVLAPTRELALQIEMEVKKYSFR-GMKAVCVYGGGNRNMQISDLERGAEIIICTPGR 416
Query: 460 MIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPR 519
+ D++ AN V ++ +TY+VLDEADRM DMGFEPQ+ +++ ++RPDRQT+M SAT+P
Sbjct: 417 LNDLIMAN---VIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPP 473
Query: 520 QMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGI--YQDQGSVI 577
+ LA+ + PI++ VG + + +I + +I
Sbjct: 474 GVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKII 533
Query: 578 VFVDKQENADSL 589
+F ++ AD L
Sbjct: 534 IFCGRKVRADDL 545
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 122/321 (38%), Positives = 184/321 (57%)
Query: 272 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQC 331
L VD S P KDFY E ++R + ++G+G PRP+ + +
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQ-VTLEGRGVPRPVFEFNEA 135
Query: 332 GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQ 391
+ +I + L + ++KPT IQ+ + P MSGRD+I IAKTGSGKT+AF+LP L HI Q
Sbjct: 136 PLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQ 194
Query: 392 PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAE 451
+ +GP +++ PTREL Q+ + + F SLGL++ C++GG Q +L+RG +
Sbjct: 195 AHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVD 254
Query: 452 IIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV 511
I+V TPGR++D L ++G TN+++ +Y+VLDEADRM DMGFEPQ+ +II +RPDRQT+
Sbjct: 255 IVVATPGRLLDFL--DNG-TTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTL 311
Query: 512 MFSATFPRQMEALARRILNKPIEIQVGGRSVVCKE-VEQHVIVXXXXXXXXXXXXXXG-- 568
MFSAT+P+++ ALA + VG + + Q V +
Sbjct: 312 MFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHI 371
Query: 569 IYQDQGSVIVFVDKQENADSL 589
+ Q + I+FV+ + AD L
Sbjct: 372 MNQKECKTIIFVETKRKADEL 392
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 125/317 (39%), Positives = 188/317 (59%)
Query: 284 PFRKDFYVEVPEIARMTPXXXXXXXXXXXGIR---VKG---KGCPRPIKTWA---QCGVS 334
P +K+FY E + M+ I +K + P P T+ QC
Sbjct: 193 PIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAFQC--Y 250
Query: 335 KKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPL 394
++++ +KK ++KPTPIQ+QA P ++ G DLIG+A+TG+GKT+ +++P H++ QP L
Sbjct: 251 PEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSL 310
Query: 395 E-ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEII 453
+ + + P ++++PTREL +Q+ E K++ GLR VCVYGG EQI ELK+G +II
Sbjct: 311 KGQRNRPGMLVLTPTRELALQVEGECCKYSYK-GLRSVCVYGGGNRDEQIEELKKGVDII 369
Query: 454 VCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMF 513
+ TPGR+ D+ +N NL+ +TY+VLDEAD+M DMGFEPQ+M+I+ +VRPDRQTVM
Sbjct: 370 IATPGRLNDLQMSN---FVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMT 426
Query: 514 SATFPRQMEALARRILNKPIEIQVGGRSVVC-KEVEQHVIVXXXXXXXXXXXXXXGIYQD 572
SAT+P + LA+ L +P+ + VG +V V+Q++IV
Sbjct: 427 SATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSS 486
Query: 573 QGSVIVFVDKQENADSL 589
VIVFV ++ AD L
Sbjct: 487 TDKVIVFVSRKAVADHL 503
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 479 (173.7 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 98/218 (44%), Positives = 138/218 (63%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KG P P+++W + G+ K++L+ + + Y++PTPIQ AIP M RDLIG+A TG
Sbjct: 334 IATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGVAVTG 393
Query: 374 SGKTVAFVLPLLRHILDQPPLEE-----TDGPMAIIMSPTRELCMQIGKEAKKFTKSLGL 428
SGKT AF+LPLL +I + P ++E DGP AI+++PTREL QI EAKKFT+ LG
Sbjct: 394 SGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGF 453
Query: 429 RVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRM 488
VV + GG EQ L+ GAEII+ TPGR++D + R+ L + Y+++DEADRM
Sbjct: 454 NVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIER---RMLVLSQCCYVIMDEADRM 510
Query: 489 FDMGFEPQVMRIID-----NVRPDRQTVMFSATFPRQM 521
D+GFE V +I+D N +PD + S+ R +
Sbjct: 511 IDLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSRHL 548
Score = 95 (38.5 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV-IVXXXXXXXXXXXXX 566
RQT+M++AT P +E +AR+ L +P + +G VEQ V ++
Sbjct: 555 RQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLGEI 614
Query: 567 XGIYQDQGSVIVFVDKQENADSL 589
+ +IVFV+ + N D++
Sbjct: 615 LSSGDFRPPIIVFVNIKRNCDAI 637
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 463 (168.0 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 97/194 (50%), Positives = 124/194 (63%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I +KG P PI+ W + +S +L A+KK YEKPTPIQ QAIP + RDLIGIA+TG
Sbjct: 686 IYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETG 745
Query: 374 SGKTVAFVLPLLRHILDQPPLE-ET--DGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRV 430
SGKT AFVLP+L ++ PPL ET DGP A++++P+REL +QI +E KF R
Sbjct: 746 SGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRT 805
Query: 431 VCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFD 490
V V GG Q EL+RG EI++ TPGR+ D L T L + Y++LDEADRM D
Sbjct: 806 VAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEK---AYTVLNQCNYVILDEADRMMD 862
Query: 491 MGFEPQVMRIIDNV 504
MGFE V I+D +
Sbjct: 863 MGFEDTVHYILDKI 876
Score = 87 (35.7 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXX 567
R T MFSAT P +E L+R+ L P I +G + +EQ +
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKLQEIL 963
Query: 568 GIYQDQGSVIVFVDKQENAD 587
+Y+ +IVFV++++ AD
Sbjct: 964 EMYEPP--IIVFVNQKKVAD 981
Score = 48 (22.0 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 235 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRK 287
K + ME ++ SS+E++E+ K+KKE + HS I+ R+
Sbjct: 287 KKKKMENDKQKKMISSKEKEEEGEGEGEG-ERKKKKEHHHIRHSCIDNRKHRR 338
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 463 (168.0 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 97/194 (50%), Positives = 124/194 (63%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I +KG P PI+ W + +S +L A+KK YEKPTPIQ QAIP + RDLIGIA+TG
Sbjct: 686 IYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETG 745
Query: 374 SGKTVAFVLPLLRHILDQPPLE-ET--DGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRV 430
SGKT AFVLP+L ++ PPL ET DGP A++++P+REL +QI +E KF R
Sbjct: 746 SGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRT 805
Query: 431 VCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFD 490
V V GG Q EL+RG EI++ TPGR+ D L T L + Y++LDEADRM D
Sbjct: 806 VAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEK---AYTVLNQCNYVILDEADRMMD 862
Query: 491 MGFEPQVMRIIDNV 504
MGFE V I+D +
Sbjct: 863 MGFEDTVHYILDKI 876
Score = 87 (35.7 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXX 567
R T MFSAT P +E L+R+ L P I +G + +EQ +
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKLQEIL 963
Query: 568 GIYQDQGSVIVFVDKQENAD 587
+Y+ +IVFV++++ AD
Sbjct: 964 EMYEPP--IIVFVNQKKVAD 981
Score = 48 (22.0 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 235 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRK 287
K + ME ++ SS+E++E+ K+KKE + HS I+ R+
Sbjct: 287 KKKKMENDKQKKMISSKEKEEEGEGEGEG-ERKKKKEHHHIRHSCIDNRKHRR 338
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 119/329 (36%), Positives = 189/329 (57%)
Query: 284 PFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKG------KGCPRPIKTWAQC-GVSKK 336
P K+FYVE + M+ + + P PI + G +
Sbjct: 175 PIHKNFYVETKATSSMSQVQVDIWRKENFNVMCNDLKDGEKRPIPNPICKFEDAFGPYPE 234
Query: 337 ILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLE- 395
++ ++KK ++KPTPIQ+QA P ++ G DLIGIA+TG+GKT+++++P H+ QP
Sbjct: 235 LMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFIHLNSQPVSRG 294
Query: 396 ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVC 455
+ +GP ++++PTREL +Q+G E K++ GL+ VC+YGG QI ++ +G +II+
Sbjct: 295 KRNGPGMLVLTPTRELALQVGAECSKYSYK-GLKSVCIYGGGNRKGQIQDIMKGVDIIIA 353
Query: 456 TPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSA 515
TPGR+ D+ N NLR +TY+VLDEAD+M D+GFE Q+M+I+ +VRPDRQT+M SA
Sbjct: 354 TPGRLNDLQMNN---FVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTIMTSA 410
Query: 516 TFPRQMEALARRILNKPIEIQVGGRSVVCKE-VEQHVIVXXXXXXXXXXXXXXGIYQDQG 574
T+P + LA L +P+ + VG +V + V+Q++I+ +
Sbjct: 411 TWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSLSPKD 470
Query: 575 SVIVFVDKQENADSLLFHSMDPCLEFLPL 603
VIVFV ++ AD L S D ++ +P+
Sbjct: 471 KVIVFVSRKLIADDL---SSDLSIQGIPV 496
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 119/329 (36%), Positives = 189/329 (57%)
Query: 284 PFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKG------KGCPRPIKTWAQC-GVSKK 336
P K+FYVE + M+ + + P PI + G +
Sbjct: 166 PIHKNFYVETKATSSMSQVQVDIWRKENFNVMCNDLKDGEKRPIPNPICKFEDAFGPYPE 225
Query: 337 ILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLE- 395
++ ++KK ++KPTPIQ+QA P ++ G DLIGIA+TG+GKT+++++P H+ QP
Sbjct: 226 LMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFIHLNSQPVSRG 285
Query: 396 ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVC 455
+ +GP ++++PTREL +Q+G E K++ GL+ VC+YGG QI ++ +G +II+
Sbjct: 286 KRNGPGMLVLTPTRELALQVGAECSKYSYK-GLKSVCIYGGGNRKGQIQDIMKGVDIIIA 344
Query: 456 TPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSA 515
TPGR+ D+ N NLR +TY+VLDEAD+M D+GFE Q+M+I+ +VRPDRQT+M SA
Sbjct: 345 TPGRLNDLQMNN---FVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTIMTSA 401
Query: 516 TFPRQMEALARRILNKPIEIQVGGRSVVCKE-VEQHVIVXXXXXXXXXXXXXXGIYQDQG 574
T+P + LA L +P+ + VG +V + V+Q++I+ +
Sbjct: 402 TWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSLSPKD 461
Query: 575 SVIVFVDKQENADSLLFHSMDPCLEFLPL 603
VIVFV ++ AD L S D ++ +P+
Sbjct: 462 KVIVFVSRKLIADDL---SSDLSIQGIPV 487
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 115/259 (44%), Positives = 160/259 (61%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKG-CPRPIKTWAQCGVSKKILDA 340
LP F K+FYVE PE+AR+TP I V+G CP+P+ + + ++D
Sbjct: 48 LPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMDV 106
Query: 341 LKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGP 400
L Q++ +PTPIQ Q P +SGRD++GIA+TGSGKT+A++LP + HI QP LE DGP
Sbjct: 107 LMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 166
Query: 401 MAIIMSPTRELCMQIGKEAKKFT-KSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGR 459
+ ++ P + + F K L VC G + +++ L + EI + TPGR
Sbjct: 167 IVSVL-PFFSTLFSVYRGGTDFKFKCSSLFWVCFLGQSLKGQRLEWLSQCVEICIATPGR 225
Query: 460 MIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPR 519
ID L SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+P+
Sbjct: 226 -IDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK 281
Query: 520 QMEALARRILNKPIEIQVG 538
++ LA L +I VG
Sbjct: 282 EVRQLAEDFLRDYTQINVG 300
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 121/327 (37%), Positives = 186/327 (56%)
Query: 283 LP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKG------KGCPRPIKTWAQCGVSK 335
LP +K+FY+E +A + I V + P P+ T+ +
Sbjct: 227 LPVLKKNFYIEAKSVAARSAEEVKIWRKENNNIFVDDLKDGDKRTIPNPVCTFEEAFAHY 286
Query: 336 K-ILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP-P 393
I++ + + ++KPTPIQ+QA P +++G DLIGIA+TG+GKT+A++LP H+ QP P
Sbjct: 287 PGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGFIHMDGQPMP 346
Query: 394 LEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEII 453
++ +GP ++++PTREL +QI E K++ G + +C+YGG + QI + G +I+
Sbjct: 347 RDKRNGPGMLVLTPTRELALQIEAECNKYSYK-GFKSICIYGGGDRNAQIKVVTSGVDIV 405
Query: 454 VCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMF 513
+ TPGR+ D+ + NLR +TY+VLDEADRM DMGFEPQ+M+II ++RPDRQTVM
Sbjct: 406 IATPGRLNDL---QMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMT 462
Query: 514 SATFPRQMEALARRILNKPIEIQVGGRSVVC-KEVEQHVIVXXXXXXXXXXXXXXGIYQD 572
SAT+P + LA+ L P+ + VG + V+Q V+ +
Sbjct: 463 SATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDFIHRMEP 522
Query: 573 QGSVIVFVDKQENADSLLFHSMDPCLE 599
V++FV K+ AD L S D CL+
Sbjct: 523 LDKVLIFVGKKLKADDL---SSDLCLQ 546
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 118/316 (37%), Positives = 182/316 (57%)
Query: 284 PFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKG--KGCPRPIKTWAQCGVSK------ 335
P +K+FY+E + + M+ I G RP+ C
Sbjct: 192 PVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDDLKDGEKRPLPN-PTCNFEDAFHCYP 250
Query: 336 KILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLE 395
+++ ++K ++KPTPIQ+QA P I+ G DLIG+A+TG+GKT+++++P HI QP L+
Sbjct: 251 EVMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHIDSQPVLQ 310
Query: 396 ET-DGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIV 454
+GP ++++PTREL +Q+ E +++ GL+ VC+YGG QI +L +GA+II+
Sbjct: 311 RARNGPGMLVLTPTRELALQVDAECSEYSYR-GLKSVCIYGGGDRDGQIKDLSKGADIII 369
Query: 455 CTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFS 514
TPGR+ D+ N L+ +TY+VLDEAD+M DMGFEPQ+M+I+ +VRPDRQTVM S
Sbjct: 370 ATPGRLHDLQMNN---FVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTS 426
Query: 515 ATFPRQMEALARRILNKPIEIQVGGRSVVC-KEVEQHVIVXXXXXXXXXXXXXXGIYQDQ 573
AT+P + LA+ L +P+ + VG +V V Q++IV +
Sbjct: 427 ATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKRSHIQAFIDSMSPK 486
Query: 574 GSVIVFVDKQENADSL 589
VI+FV ++ AD L
Sbjct: 487 DKVIIFVSRKAVADHL 502
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 123/338 (36%), Positives = 184/338 (54%)
Query: 261 AANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRV---- 316
A N AS ++ + P K+FY E A M+P I
Sbjct: 168 AINWASLRENRAKYEAMKWADLPPIEKNFYKESSRTACMSPEEVELWRKENNNIICDDLK 227
Query: 317 KG-KGC-PRPIKTWAQCGVS-KKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+G K C P P+ + I+ ++K ++KPTPIQ+QA P I+ G DLIGIA+TG
Sbjct: 228 EGEKRCIPNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTG 287
Query: 374 SGKTVAFVLPLLRHILDQP-PLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVC 432
+GKT+A+++P H+ QP P ++ GP ++++PTREL +Q+ E K+T G + +C
Sbjct: 288 TGKTLAYLMPGFIHLASQPIPKDKRGGPGMLVLAPTRELALQVEAECLKYTYK-GFKSIC 346
Query: 433 VYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMG 492
+YGG QI+ + +G +I++ TPGR+ D+ N NL+ +TY+ +EADRM DMG
Sbjct: 347 IYGGGDRKAQINVVTKGVDIVIATPGRLNDLQMNN---FINLKSITYLA-NEADRMLDMG 402
Query: 493 FEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVC-KEVEQHV 551
FEPQ+M+I+ +VRPDRQTVM SAT+P + LA+ L P+ + VG + VEQ V
Sbjct: 403 FEPQIMKILIDVRPDRQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKV 462
Query: 552 IVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
IV + + I+FV K+ AD +
Sbjct: 463 IVINEEEKKAFMENFIDSMKPKDKAIIFVGKKSTADDI 500
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 126/330 (38%), Positives = 181/330 (54%)
Query: 276 DHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSK 335
D E PF D P I G P P+ T+A+ + +
Sbjct: 109 DRREREVNPFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDLGE 168
Query: 336 KILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHIL-DQ--- 391
+ +++ Y KPTP+Q AIP ++ GRDL+ A+TGSGKT AF P++ I+ DQ
Sbjct: 169 ALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQ 228
Query: 392 -PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGA 450
P T P+A+I+SPTREL QI EAKKF+ G++VV YGGT I++Q+ EL+RG
Sbjct: 229 RPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGV 288
Query: 451 EIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNV----RP 506
+I+V TPGR+ D+L RV+ ++ + ++ LDEADRM DMGFEPQ+ +I++ + R
Sbjct: 289 DILVATPGRLNDLL--ERARVS-MQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRG 345
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVG--GRS--VVCKEVEQHVIVXXXXXXXXX 562
RQT++FSATFPR+++ LA L I + VG G S ++ + VE V+
Sbjct: 346 VRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVE-FVLDSDKRSHLMD 404
Query: 563 XXXXX---GIYQDQGSVIVFVDKQENADSL 589
GI Q +VFV+ + ADSL
Sbjct: 405 LLHAQRENGIQGKQALTLVFVETKRGADSL 434
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 117/329 (35%), Positives = 189/329 (57%)
Query: 284 PFRKDFYVEVPEIARMTPXXXXXXXXXXXGIR----VKG--KGCPRPIKTWAQCGVS-KK 336
P +K+ Y+E ++ IR +G + P+P T+ +
Sbjct: 152 PIKKNLYIESKATHSLSEAQVEIWRKENFNIRCDDLTEGEKRPIPKPTCTFEDAFQQYPE 211
Query: 337 ILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP-PLE 395
I+ ++++ ++KPTPIQ+Q+ P I+ G DLIGIA+TG+GKT+++++P HI QP +
Sbjct: 212 IMQSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQTGTGKTLSYLMPGFIHIHSQPVSRK 271
Query: 396 ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVC 455
+ +GP ++++PTREL +Q+ E K+ GL+ VC+YGG QI ++ +G +II+
Sbjct: 272 QRNGPGMLVLTPTRELALQVEAECSKYLYK-GLKSVCIYGGGNRKGQIQDVTKGVDIIIA 330
Query: 456 TPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSA 515
TPGR+ D+ N NLR +TY+VLDEAD+M D+GFE Q+M+I+ +VRPDRQTVM +A
Sbjct: 331 TPGRLNDLQMNN---FVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTVMTTA 387
Query: 516 TFPRQMEALARRILNKPIEIQVGGRSVVC-KEVEQHVIVXXXXXXXXXXXXXXGIYQDQG 574
++P LA+ L +P+ + VG +V V+Q++IV +
Sbjct: 388 SWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNTVKQNIIVTTEEEKRSLVKEFLQSLSPKD 447
Query: 575 SVIVFVDKQENADSLLFHSMDPCLEFLPL 603
VIVFV ++ AD L S D ++ +P+
Sbjct: 448 KVIVFVSRKLVADDL---SSDLSIQGIPV 473
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 110/263 (41%), Positives = 161/263 (61%)
Query: 284 PFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRV----KG-KGC-PRPIKTWAQCGVS-KK 336
P K+FY E A M+P I +G K C P P+ +
Sbjct: 4 PIEKNFYKESSRTACMSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDVFEQYPD 63
Query: 337 ILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP-PLE 395
I+ ++K ++KPTPIQ+QA P I+ G DLIGIA+TG+GKT+A+++P H+ QP P +
Sbjct: 64 IMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPKD 123
Query: 396 ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVC 455
+ GP ++++PTREL +Q+ E K+T G + +C+YGG QI+ + +G +I++
Sbjct: 124 KRGGPGMLVLAPTRELALQVEAECLKYTYK-GFKSICIYGGGDRKAQINVVTKGVDIVIA 182
Query: 456 TPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSA 515
TPGR+ D+ N NL+ +TY+VLDEADRM DMGFEPQ+M+I+ +VRPDRQTVM SA
Sbjct: 183 TPGRLNDLQMNN---FINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMMSA 239
Query: 516 TFPRQMEALARRILNKPIEIQVG 538
T+P + LA+ L P+ + VG
Sbjct: 240 TWPDGVRRLAKSYLRNPMIVYVG 262
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 124/329 (37%), Positives = 181/329 (55%)
Query: 276 DHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSK 335
D E PF D + P + I G P P+ T+A+ + +
Sbjct: 97 DRRDTETNPFGNDGNAD-PAVNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGE 155
Query: 336 KILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLE 395
+ +++ Y KPTP+Q AIP + +GRDL+ A+TGSGKT AF P++ I+ +E
Sbjct: 156 ALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIE 215
Query: 396 ETDG-----PMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGA 450
G P+A+I+SPTREL QI EA+KF+ G++VV YGGT +++QI EL+RG
Sbjct: 216 RPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGV 275
Query: 451 EIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNV-RPD-- 507
+I+V TPGR+ D+L GRV+ L+ V ++ LDEADRM DMGFEPQ+ +I+ + P
Sbjct: 276 DILVATPGRLNDLL--ERGRVS-LQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 332
Query: 508 -RQTVMFSATFPRQMEALARRILNKPIEIQVG--GRS--VVCKEVE--QHVIVXXXXXXX 560
RQT++FSATFPR+++ LA L+ I + VG G S ++ + VE
Sbjct: 333 VRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDL 392
Query: 561 XXXXXXXGIYQDQGSVIVFVDKQENADSL 589
G Q +VFV+ ++ ADSL
Sbjct: 393 LHAQRENGNQGKQALTLVFVETKKGADSL 421
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 106/259 (40%), Positives = 164/259 (63%)
Query: 336 KILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP--- 392
+++ +KK ++KPTPIQ+QA P I+ G DLIG+A+TG+GKT+++++P H+ QP
Sbjct: 251 EVMINIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHVDSQPVVF 310
Query: 393 PLEET-DGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAE 451
L+ +GP ++++PTREL +Q+ E K++ GL+ VCVYGG QI +L +G +
Sbjct: 311 SLQRARNGPGMLVLTPTRELALQVEAECSKYSYK-GLKSVCVYGGGDRDGQIKDLLKGVD 369
Query: 452 IIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV 511
II+ TPGR+ D+ N L+ ++Y+VLDEAD+M DMGFEPQ+M+I+ ++RPDRQTV
Sbjct: 370 IIIATPGRLNDLQMNN---FVYLKSISYLVLDEADKMLDMGFEPQIMKILLDIRPDRQTV 426
Query: 512 MFSATFPRQMEALARRILNKPIEIQVGGRSVVC-KEVEQHVIVXXXXXXXXXXXXXXGIY 570
M SAT+P + LA+ L +P+ + VG +V V+Q++IV
Sbjct: 427 MTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKRSHIQTFIESM 486
Query: 571 QDQGSVIVFVDKQENADSL 589
+ VI+FV ++ AD L
Sbjct: 487 SPKDKVIIFVSRKAVADHL 505
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 487 (176.5 bits), Expect = 7.5e-48, Sum P(2) = 7.5e-48
Identities = 102/205 (49%), Positives = 136/205 (66%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ +KG P PI++W + G K+I+D + K Y++PTPIQ QAIP + RD+IG+A+TG
Sbjct: 382 VTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETG 441
Query: 374 SGKTVAFVLPLLRHILDQPP---LEETD-GPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT+AF++PLL I P LE+ D GP AIIM+PTREL QI +E KF + LG+R
Sbjct: 442 SGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLGIR 501
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V V GG EQ L+ G EI++ TPGR+ID+L R L + TYIVLDEADRM
Sbjct: 502 TVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENRYLVLNQCTYIVLDEADRMI 558
Query: 490 DMGFEPQVMRIID-----NVRPDRQ 509
DMGFEP V +I++ N++PD +
Sbjct: 559 DMGFEPDVQKILEYMPVTNLKPDTE 583
Score = 43 (20.2 bits), Expect = 7.5e-48, Sum P(2) = 7.5e-48
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 574 GSVIVFVDKQENADSLLFHSMDPCLEFLPL 603
G I FV K DS LF+ + C+ P+
Sbjct: 764 GCAISFVTKD---DSALFYDLKQCVSASPV 790
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 97/221 (43%), Positives = 150/221 (67%)
Query: 332 GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQ 391
G+S IL A+ +Q Y +PTPIQ QAIPA++ GRDL+ A+TG+GKT F LPLL+H++ +
Sbjct: 7 GLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITR 66
Query: 392 PPLEETDGPM-AIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGA 450
P + P+ A+I++PTREL QIG+ + ++K L +R + V+GG I+ Q+ +L+ G
Sbjct: 67 QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGV 126
Query: 451 EIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQT 510
+++V TPGR++D+ N+ L +V +VLDEADRM DMGF + R++ + RQ
Sbjct: 127 DVLVATPGRLLDLEHQNA---VKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQN 183
Query: 511 VMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV 551
++FSATF ++ALA ++L+ P+EI+V R+ +V QHV
Sbjct: 184 LLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHV 224
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 104/278 (37%), Positives = 160/278 (57%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I V G P P+ ++ G ++L + + PTPIQAQ+ P M GRD++ IAKTG
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTG 205
Query: 374 SGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCV 433
SGKT+ +++P H L + + GP +++SPTREL QI +EA KF +S + C+
Sbjct: 206 SGKTLGYLIPGFLH-LQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCL 264
Query: 434 YGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGF 493
YGG Q+ +L+RGA+I+V TPGR+ D+L R++ LR+++Y+VLDEADRM DMGF
Sbjct: 265 YGGAPKGPQLRDLERGADIVVATPGRLNDILEMR--RIS-LRQISYLVLDEADRMLDMGF 321
Query: 494 EPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGG--RSVVCKEVEQHV 551
EPQ+ +I+ + RQT+M++AT+P+ + +A +L P ++ +G V K + QH+
Sbjct: 322 EPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHI 381
Query: 552 IVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
V + VI+F + D L
Sbjct: 382 EVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQL 419
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 114/304 (37%), Positives = 173/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CPR I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 169 VEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 228
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 229 SGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 288
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 289 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 345
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 346 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 405
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ +VFV+ ++ ADSL L+H
Sbjct: 406 VGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHE 465
Query: 594 MDPC 597
C
Sbjct: 466 GYAC 469
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 114/304 (37%), Positives = 172/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I+ ++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 163 VEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTG 222
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 223 SGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 282
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 283 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 339
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 340 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 399
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ G +VFV+ ++ ADSL L+H
Sbjct: 400 VGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHE 459
Query: 594 MDPC 597
C
Sbjct: 460 GYAC 463
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 114/304 (37%), Positives = 172/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I+ ++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 166 VEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTG 225
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 226 SGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 285
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 286 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 342
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 343 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 402
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ G +VFV+ ++ ADSL L+H
Sbjct: 403 VGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHE 462
Query: 594 MDPC 597
C
Sbjct: 463 GYAC 466
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 102/255 (40%), Positives = 158/255 (61%)
Query: 337 ILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP-PLE 395
+L ++ + KPTPIQ+QA P I+ G DLI +A+TG+GKT+++++P H+ QP E
Sbjct: 233 LLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISRE 292
Query: 396 ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVC 455
+ +GP ++++PTREL + + E K++ GL+ +C+YGG + QI ++ +G +II+
Sbjct: 293 QRNGPGMLVLTPTRELALHVEAECSKYSYK-GLKSICIYGGRNRNGQIEDISKGVDIIIA 351
Query: 456 TPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSA 515
TPGR+ D+ NS NLR +TY+V+DEAD+M DM FEPQ+ +I+ +VRPDRQTVM SA
Sbjct: 352 TPGRLNDLQMNNS---VNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSA 408
Query: 516 TFPRQMEALARRILNKPIEIQVGGRSVVC-KEVEQHVIVXXXXXXXXXXXXXXGIYQDQG 574
T+P + LA L P+ + VG ++V V+Q++IV
Sbjct: 409 TWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPND 468
Query: 575 SVIVFVDKQENADSL 589
VI+FV ++ AD L
Sbjct: 469 KVIMFVSQKHIADDL 483
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 113/304 (37%), Positives = 173/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 167 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 226
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 227 SGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEAR 286
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 287 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 343
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 344 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 403
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ ++VFV+ ++ ADSL L+H
Sbjct: 404 VGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHE 463
Query: 594 MDPC 597
C
Sbjct: 464 GYAC 467
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 113/304 (37%), Positives = 173/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 166 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 225
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 226 SGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEAR 285
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 286 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 342
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 343 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 402
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ ++VFV+ ++ ADSL L+H
Sbjct: 403 VGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHE 462
Query: 594 MDPC 597
C
Sbjct: 463 GYAC 466
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 120/328 (36%), Positives = 179/328 (54%)
Query: 276 DHSTIEYLPFRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSK 335
D E PF D +E P + G P P+ T+A +
Sbjct: 102 DRREREVNPFGDDAELE-PVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGD 160
Query: 336 KILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLE 395
+ +++ Y +PTP+Q AIP +++ RDL+ A+TGSGKT AF P++ I+ +E
Sbjct: 161 ALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVE 220
Query: 396 ETDG-----PMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGA 450
G P A+I+SPTREL QI EAKKF+ G++VV YGGT I +Q+ EL+RG
Sbjct: 221 RPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGC 280
Query: 451 EIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNV----RP 506
+I+V TPGR+ D+L RV+ ++ + ++ LDEADRM DMGFEPQ+ +I++ + R
Sbjct: 281 DILVATPGRLNDLL--ERARVS-MQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRG 337
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVG--GRS--VVCKEVEQHVIVXXXXXXXXX 562
RQT++FSATFP Q++ LA ++ I + VG G S ++ + VE V
Sbjct: 338 VRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVE-FVQESDKRSHLMD 396
Query: 563 XXXXXGIYQDQGSV-IVFVDKQENADSL 589
QD+ S+ +VFV+ + AD+L
Sbjct: 397 LLHAQRETQDKQSLTLVFVETKRGADTL 424
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 113/304 (37%), Positives = 172/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 167 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 226
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 227 SGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 286
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 287 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 343
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 344 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 403
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ +VFV+ ++ ADSL L+H
Sbjct: 404 VGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHE 463
Query: 594 MDPC 597
C
Sbjct: 464 GYAC 467
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 113/304 (37%), Positives = 172/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 228 SGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 287
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 288 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 344
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ +VFV+ ++ ADSL L+H
Sbjct: 405 VGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHE 464
Query: 594 MDPC 597
C
Sbjct: 465 GYAC 468
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 113/304 (37%), Positives = 172/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 228 SGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 287
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 288 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 344
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ +VFV+ ++ ADSL L+H
Sbjct: 405 VGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHE 464
Query: 594 MDPC 597
C
Sbjct: 465 GYAC 468
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 113/304 (37%), Positives = 172/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 228 SGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 287
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 288 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 344
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ +VFV+ ++ ADSL L+H
Sbjct: 405 VGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHE 464
Query: 594 MDPC 597
C
Sbjct: 465 GYAC 468
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 112/305 (36%), Positives = 172/305 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 144 VEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 203
Query: 374 SGKTVAFVLPLLRHILDQPP------LEETDG--------PMAIIMSPTRELCMQIGKEA 419
SGKT AF+LP+L I P ++ T+G P++++++PTREL +QI +EA
Sbjct: 204 SGKTAAFLLPILSQIYADGPGDALRAMKATNGRYGRRKQYPISLVLAPTRELAVQIYEEA 263
Query: 420 KKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 479
+KF +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y
Sbjct: 264 RKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKY 320
Query: 480 IVLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEI 535
+VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 321 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFL 380
Query: 536 QVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFH 592
VG + + Q V+ +VFV+ ++ AD+L L+H
Sbjct: 381 AVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYH 440
Query: 593 SMDPC 597
C
Sbjct: 441 EGYAC 445
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 482 (174.7 bits), Expect = 9.6e-46, P = 9.6e-46
Identities = 115/306 (37%), Positives = 176/306 (57%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 210 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 269
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 270 SGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 329
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 330 KFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 386
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 387 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 446
Query: 537 VGGRSVVCKEVEQHVI-VXXXXXXXXXXXXXXGIYQDQGSV-IVFVDKQENADSL---LF 591
VG + + Q V+ V + S+ +VFV+ ++ ADSL L+
Sbjct: 447 VGRVGSTSENITQKVVWVEESDKRSFLLDLLNATESGKDSLTLVFVETKKGADSLEDFLY 506
Query: 592 HSMDPC 597
H C
Sbjct: 507 HEGYAC 512
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 113/304 (37%), Positives = 172/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 228 SGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 287
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 288 KFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 344
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ +VFV+ ++ ADSL L+H
Sbjct: 405 VGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHE 464
Query: 594 MDPC 597
C
Sbjct: 465 GYAC 468
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 113/304 (37%), Positives = 172/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 228 SGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 287
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 288 KFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 344
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ +VFV+ ++ ADSL L+H
Sbjct: 405 VGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHE 464
Query: 594 MDPC 597
C
Sbjct: 465 GYAC 468
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 99/273 (36%), Positives = 165/273 (60%)
Query: 322 PRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFV 381
P+PI T I + L K+ +EKPTP+Q+ P +SG D++GI+KTGSGKT++F+
Sbjct: 136 PKPIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFI 194
Query: 382 LPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISE 441
LP + HIL QP GP ++++PTREL QI +EA+++ + + + + +YGG
Sbjct: 195 LPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRS 254
Query: 442 QISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRII 501
Q +L R +I+V TPGR+ID + SG ++ L+ ++++V+DEADR+ +MGFE Q+ I
Sbjct: 255 QQLQLSRRPKIVVGTPGRIIDFM--ESGDLS-LKNISFLVVDEADRLMEMGFEQQIDGIF 311
Query: 502 DNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVC-KEVEQHV-IVXXXXXX 559
+++RPDRQ + +SAT+P+++ + A + + PI +Q+G + K + Q IV
Sbjct: 312 NSIRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADK 371
Query: 560 XXXXXXXXG-IYQ--DQGSVIVFVDKQENADSL 589
G IY ++ ++F ++ AD+L
Sbjct: 372 VDALMDTLGEIYSADEKAQTLIFTMTKKGADTL 404
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 96/224 (42%), Positives = 151/224 (67%)
Query: 332 GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHI-LD 390
G+S ++L A+++Q Y +PTP+Q QAIP I+ RD++ A+TG+GKT F LPLL+ + +
Sbjct: 16 GLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFVS 75
Query: 391 QPPLEETDGPM--AIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKR 448
+PPL+ + P+ A+I++PTREL +Q+ + + + K L L+ V+GG I QI+ L+R
Sbjct: 76 RPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQINHLRR 135
Query: 449 GAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDR 508
G +I+V TPGR++D++ N G V NL RV + VLDEADRM DMGF P + RI+ + R
Sbjct: 136 GVDILVATPGRLLDLV--NQG-VLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESR 192
Query: 509 QTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
Q ++FSATF ++++ L ++L+ P I+V R+ + HV+
Sbjct: 193 QNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARIT-HVV 235
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 96/224 (42%), Positives = 151/224 (67%)
Query: 332 GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHI-LD 390
G+S ++L A+++Q Y +PTP+Q QAIP I+ RD++ A+TG+GKT F LPLL+ + +
Sbjct: 16 GLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFVS 75
Query: 391 QPPLEETDGPM--AIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKR 448
+PPL+ + P+ A+I++PTREL +Q+ + + + K L L+ V+GG I QI+ L+R
Sbjct: 76 RPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQINHLRR 135
Query: 449 GAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDR 508
G +I+V TPGR++D++ N G V NL RV + VLDEADRM DMGF P + RI+ + R
Sbjct: 136 GVDILVATPGRLLDLV--NQG-VLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESR 192
Query: 509 QTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
Q ++FSATF ++++ L ++L+ P I+V R+ + HV+
Sbjct: 193 QNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARIT-HVV 235
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 111/293 (37%), Positives = 167/293 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 168 VEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + G P++++++PTREL +QI +EA+
Sbjct: 228 SGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQYPISLVLAPTRELAVQIYEEAR 287
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ + VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 288 KFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 344
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RII D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
VG + + Q V+ +VFV+ ++ ADSL
Sbjct: 405 VGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGTDSLTLVFVETKKGADSL 457
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 112/304 (36%), Positives = 171/304 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I++++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 146 VEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 205
Query: 374 SGKTVAFVLPLLRHILDQPP------LEETD--G-----PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P ++E G P++++++PTREL +QI +EA+
Sbjct: 206 SGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 265
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF +R VYGG I +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 266 KFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 322
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 323 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 382
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ +VFV+ ++ AD+L L+H
Sbjct: 383 VGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHE 442
Query: 594 MDPC 597
C
Sbjct: 443 GYAC 446
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 111/290 (38%), Positives = 163/290 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ GK P PI + + +L+ +K + KPTP+Q ++P + +GRDL+ A+TG
Sbjct: 130 VDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTG 189
Query: 374 SGKTVAFVLPLLRHILDQ-P-PLEETDG--------PMAIIMSPTRELCMQIGKEAKKFT 423
SGKT F+ P+L P P E+ G P A+IM+PTREL QI EAKKFT
Sbjct: 190 SGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFT 249
Query: 424 KSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLD 483
++ VYGG+ I Q+ E++RG +++V TPGR+ D+L G+++ L V Y+VLD
Sbjct: 250 YRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLL--ERGKIS-LANVKYLVLD 306
Query: 484 EADRMFDMGFEPQVMRIIDN--VRP--DRQTVMFSATFPRQMEALARRILNKPIEIQVGG 539
EADRM DMGFEPQ+ I+++ + P +RQT+MFSATFP ++ LAR L+ I + VG
Sbjct: 307 EADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGR 366
Query: 540 RSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
+ + Q V+ D G ++FV+ + AD L
Sbjct: 367 VGSTSENITQKVLYVENQDKKSALLDLLSASTD-GLTLIFVETKRMADQL 415
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 486 (176.1 bits), Expect = 3.0e-45, P = 3.0e-45
Identities = 108/306 (35%), Positives = 174/306 (56%)
Query: 290 YVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKP 349
+V P++ ++P + G+ P P T+ G+ +IL L + P
Sbjct: 402 FVTSPDVPHLSPVEIYRKQHE---VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSP 458
Query: 350 TPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLP---LLRHILDQPPLEETDGPMAIIMS 406
TPIQAQ P + RD++ IAKTGSGKT+ +++P LLRH + + +GP +I++
Sbjct: 459 TPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRN----DSRNGPTVLILA 514
Query: 407 PTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAA 466
PTREL QI EA +F +S + C+YGG Q+ EL+RGA+I+V TPGR+ D+L
Sbjct: 515 PTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEM 574
Query: 467 NSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALAR 526
++ + ++V+ +VLDEADRM DMGFEPQ+ +I++ + P RQT+M++AT+P+++ +A
Sbjct: 575 ---KMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAS 631
Query: 527 RILNKPIEIQVGGRSVVC--KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGS-VIVFVDKQ 583
+L P+++ +G + K + Q+V V Q++GS VI+F +
Sbjct: 632 DLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRS-QERGSKVIIFCSTK 690
Query: 584 ENADSL 589
D L
Sbjct: 691 RLCDHL 696
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 113/328 (34%), Positives = 177/328 (53%)
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTA-ANLASKQK--KELSKVDHSTIEYLPF--R 286
E + ++ + + L+ S +E D +S++ + + SK K K+ SK + E +
Sbjct: 13 ESLEVKVEQSSSKKLKMSKRDESSDESSSSDSEVESKSKSIKKSSKSEEKKSEKKSSSSK 72
Query: 287 KDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNY 346
+D EV E + + ++GK P P + + + Q +
Sbjct: 73 EDKEEEVKEETKEDIVLSPTEWRKKHNVLIEGKSQPNPFQKFTDYEFPRMFQHIF--QGF 130
Query: 347 EKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDG-PMAIIM 405
PT IQ Q+ P I+ G DL+G+A TGSGKT+AF+LP L I+ P P+ ++M
Sbjct: 131 TAPTVIQGQSWPIILGGNDLVGLAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVM 190
Query: 406 SPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLA 465
+PTREL QI + K + +R +C YGG G +Q L+ G +I++ TPGR+ D+L
Sbjct: 191 APTRELAQQIEEVCKTSIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLL- 249
Query: 466 ANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALA 525
R +L V Y+VLDEADRM DMGF PQ+ +ID + +RQT+MFSAT+P++++ LA
Sbjct: 250 ----RKHHLSSVQYLVLDEADRMLDMGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLA 305
Query: 526 RRILNKPIEIQVGGRSVVCK-EVEQHVI 552
+ L PI+I VG + + V QH++
Sbjct: 306 SKFLKDPIKITVGSQELTGSINVTQHIV 333
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 477 (173.0 bits), Expect = 5.4e-45, P = 5.4e-45
Identities = 96/204 (47%), Positives = 135/204 (66%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KG PRP+++W + ++ ++L A+++ Y+KP+PIQ AIP + RD+IGIA+TG
Sbjct: 301 ISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETG 360
Query: 374 SGKTVAFVLPLLRHILDQPPLEE---TDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRV 430
SGKT AFVLP+L +I PP+ E T+GP A++M+PTREL QI +E KF LG RV
Sbjct: 361 SGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRV 420
Query: 431 VCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFD 490
+ GG I EQ ++ +G EI++ TPGR+ID L R L + Y+VLDEADRM D
Sbjct: 421 TSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMID 477
Query: 491 MGFEPQVMRIID-----NVRPDRQ 509
MGFEPQV ++D N++P+ +
Sbjct: 478 MGFEPQVAGVLDAMPSSNLKPENE 501
Score = 252 (93.8 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 67/208 (32%), Positives = 98/208 (47%)
Query: 396 ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVC 455
ET+GP A++M+PTREL QI +E KF LG RV + GG I EQ ++ +G EI++
Sbjct: 386 ETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIA 445
Query: 456 TPGRMIDMLAANSGRVTNLRRVTYIVLDEA-------------DRMFDMGFEPQ-VMRII 501
TPGR+ID L + V D D M +P+ +
Sbjct: 446 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEEL 505
Query: 502 DNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXX 561
D + R T MFSAT P +E LAR+ L P+ + +G + QHVI+
Sbjct: 506 DEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFF 565
Query: 562 XXXXXXGIYQDQGSVIVFVDKQENADSL 589
++ + IVFV+ ++N DS+
Sbjct: 566 RLQKLLDELGEK-TAIVFVNTKKNCDSI 592
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 479 (173.7 bits), Expect = 5.7e-45, P = 5.7e-45
Identities = 113/296 (38%), Positives = 169/296 (57%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G+ P I ++ +++ I + + Y+KPTP+Q AIP I++GRDL+ A+TG
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTG 342
Query: 374 SGKTVAFVLPLLRHILDQ---PPLEET-------DGPMAIIMSPTRELCMQIGKEAKKFT 423
SGKT AF++P+L + + PP + T P+ ++++PTREL QI +EAKKF
Sbjct: 343 SGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFA 402
Query: 424 KSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLD 483
+R +YGG SEQ+ EL RG +IV TPGR+ DM+ G+V L + ++VLD
Sbjct: 403 YRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITR--GKV-GLENIRFLVLD 459
Query: 484 EADRMFDMGFEPQVMRIID--NVRP--DRQTVMFSATFPRQMEALARRILNKPIEIQVGG 539
EADRM DMGFEPQ+ RI++ N+ P RQT+MFSATFP+Q++ LA L+ I + VG
Sbjct: 460 EADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGR 519
Query: 540 RSVVCKEVEQHVI-VXXXXXXXXXXXXXXGI-----YQDQGSVIVFVDKQENADSL 589
+ + Q ++ V I Y ++FV+ ++ ADSL
Sbjct: 520 VGSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSL 575
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 438 (159.2 bits), Expect = 7.8e-45, Sum P(2) = 7.8e-45
Identities = 106/288 (36%), Positives = 157/288 (54%)
Query: 313 GIRVKGKGCPRPIKTWAQCGVSKKILDALKKQN-YEKPTPIQAQAIPAIMSGRDLIGIAK 371
GI +G P PI ++ + K +L+ ++KQ PT IQ Q IP +SGRD+IGIA
Sbjct: 176 GISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIAS 235
Query: 372 TGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLG- 427
TGSGKT+ FVLPL+ L+Q P ++GP +I+ P+REL QI + +LG
Sbjct: 236 TGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGK 295
Query: 428 -----LRV-VCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIV 481
+R +C+ GG I EQ +++ G I+V TPGR+ DML ++ NL Y+V
Sbjct: 296 AGLPEMRAGLCI-GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTK---KIINLEVCRYLV 351
Query: 482 LDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRS 541
LDEADRM DMGFE ++ I + RQT++FSAT PR+++ A+ L KPI + VG
Sbjct: 352 LDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAG 411
Query: 542 VVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
V Q + + + V++F +K+ + D++
Sbjct: 412 AASLNVLQEL--EFVRSENKLVRVLECLQKTSPKVLIFAEKKVDVDNI 457
Score = 51 (23.0 bits), Expect = 7.8e-45, Sum P(2) = 7.8e-45
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 233 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE 271
K + E M+E +DG+ SS ++ +D+ A ++K+E
Sbjct: 18 KIQEEEMKERRDGMNLSSGDDDQDVDDMFLT-ALQRKRE 55
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 112/304 (36%), Positives = 169/304 (55%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I+ ++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 167 VEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 226
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SGKT AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 227 SGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 286
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 287 KFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 343
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 344 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 403
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ +VFV+ ++ ADSL LF
Sbjct: 404 VGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQE 463
Query: 594 MDPC 597
C
Sbjct: 464 RYAC 467
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 115/313 (36%), Positives = 176/313 (56%)
Query: 235 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 294
K + EEN + +E E QE L++K+KK+ K + E K+ +VP
Sbjct: 31 KNKHTEENHE-VE---EVPQEVTNGVEEELSNKEKKKKRKREEKESE-----KNKKKDVP 81
Query: 295 EIARMTPXXXXXXXXXXXGIRVKGKGCPRP----IKTWAQCGVSKKILDALKKQNYEKPT 350
E ++ + V GKG +KT+A+ + + +LD K +EKP+
Sbjct: 82 E-KKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCK--TFEKPS 138
Query: 351 PIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPL----EETDGPMAIIMS 406
PIQ+ P ++ GRDLIGIAKTGSGKT+AF +P + H+L + + P +++S
Sbjct: 139 PIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLS 198
Query: 407 PTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAA 466
PTREL +QI ++ + GL+ +CVYGG+ QIS ++ G +I++ TPGR+ D++ +
Sbjct: 199 PTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIES 258
Query: 467 NSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALAR 526
N V L V+++VLDEADRM DMGFE V I+ N RQ VMFSAT+P + LA+
Sbjct: 259 N---VLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQ 315
Query: 527 RILN-KPIEIQVG 538
++ PI++ +G
Sbjct: 316 EFMDPNPIKVIIG 328
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 347 (127.2 bits), Expect = 1.0e-44, Sum P(3) = 1.0e-44
Identities = 73/197 (37%), Positives = 114/197 (57%)
Query: 395 EETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIV 454
E +I+ PTRELC+Q+ E K F K+L ++ V VYGG QI+ LK+GA+IIV
Sbjct: 423 ERASDTYGLILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIV 482
Query: 455 CTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFS 514
TPGR++D L +G + NL + Y+V+DEADR+ DMGFE Q+ +I+ V ++Q + +
Sbjct: 483 ATPGRLLDFL--ENGNI-NLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLT 539
Query: 515 ATFPRQMEALARRILN-KPIEIQVGGRSVVC-KEVEQHVIVXXXXXXXXXXXXXXGIYQD 572
AT+P Q+ LA + P++IQ+G + K +EQ+VI+ +
Sbjct: 540 ATWPEQVRKLAYDFCSYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENYE 599
Query: 573 QGSVIVFVDKQENADSL 589
+++F D + N D+L
Sbjct: 600 NNKILIFCDTKRNCDNL 616
Score = 139 (54.0 bits), Expect = 1.0e-44, Sum P(3) = 1.0e-44
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 335 KKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHIL 389
+ IL+ L + + +PT IQ P +SG+DLIG+A+TGSGKT+AFVLP HIL
Sbjct: 297 ESILNYLNNK-FSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLPCFMHIL 350
Score = 38 (18.4 bits), Expect = 1.0e-44, Sum P(3) = 1.0e-44
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVD 276
+ K ++ +N Y+ +Q + ++ NL ++Q LSK D
Sbjct: 221 DNVKYKMERQNLYNNNYNKCNDQNNNQNSNDNLNNEQTNCLSKED 265
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 473 (171.6 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 114/299 (38%), Positives = 164/299 (54%)
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 291
+K K +E + E+EQE L + KKE KV H D +
Sbjct: 223 KKEKNSFYQEMMENRRTVDEKEQE-----MHRLEKELKKE-KKVAHD---------DRHW 267
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTP 351
+ E++ M+ I +KG PRP++ W + G ++ A+K+ Y +PTP
Sbjct: 268 RMKELSEMSDRDWRIFREDF-NISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTP 326
Query: 352 IQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD----GPMAIIMSP 407
IQ QAIP + RD+IG+A+TGSGKT AF+LPLL I P +E + GP AIIM+P
Sbjct: 327 IQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAP 386
Query: 408 TRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAAN 467
TREL QI +E KF K LG++ V V GG +Q +L+ G E+++ TPGR++D+L
Sbjct: 387 TRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVL--- 443
Query: 468 SGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALAR 526
R L + TY++LDEADRM DMGFEP V ++++ + PD + F + EAL +
Sbjct: 444 ENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYM-PDTNMKKDTDEFDNE-EALMK 500
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 105/293 (35%), Positives = 165/293 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I+ + + G +++ + + Y KPTP+Q +IP +++ RDL+ A+TG
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 186
Query: 374 SGKTVAFVLPLLRHIL----D--QPPL----EETDGPMAIIMSPTRELCMQIGKEAKKFT 423
SGKT AF+LP+++HIL D +PP T P A+++SPTREL +QI KEA KF+
Sbjct: 187 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS 246
Query: 424 KSLGLRVVCVYGGT-GISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVL 482
++ +YGG +Q++ L+ G I++ TPGR+ID++ G + L Y+VL
Sbjct: 247 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII--EQGFI-GLAGCRYLVL 303
Query: 483 DEADRMFDMGFEPQVMRIIDNVRPD---RQTVMFSATFPRQMEALARRIL-NKPIEIQVG 538
DEADRM DMGFEPQ+ +I+ P R T MFSATFP++++ LA+ L + I + VG
Sbjct: 304 DEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVG 363
Query: 539 GRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLF 591
+ +EQ ++ + V+VFV+ + A+ L +
Sbjct: 364 RVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAY 416
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 470 (170.5 bits), Expect = 2.6e-44, P = 2.6e-44
Identities = 110/283 (38%), Positives = 163/283 (57%)
Query: 324 PIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLP 383
P+ ++A + +L +K Y KPTP+Q A+P I+ RDL+ A+TGSGKT AF+ P
Sbjct: 245 PLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFP 304
Query: 384 LLRHIL-----DQPP-----LEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCV 433
++ IL + PP + P A++++PTREL QI EA KF+ + V +
Sbjct: 305 IISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVI 364
Query: 434 YGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGF 493
YGG + QI+EL RG +I+V T GR++D+L GRV+ L ++ Y+VLDEADRM DMGF
Sbjct: 365 YGGAEVFHQINELDRGCDILVATTGRLVDLLMR--GRVS-LSKIKYLVLDEADRMLDMGF 421
Query: 494 EPQVMRIIDNV-RP---DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
EPQ+ +II P DRQT+MFSATFP+Q++ LA L I ++VG + + Q
Sbjct: 422 EPQIRQIISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGTT-QNITQ 480
Query: 550 HV-IVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLF 591
+ V G+ D G ++FV+ + + D+L +
Sbjct: 481 RIEYVVEEDKNSYLLDYLSGLKSD-GLCLIFVETKRSCDTLTY 522
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 118/355 (33%), Positives = 188/355 (52%)
Query: 247 EYSSEEEQEDLTST---AANLASKQKKE-------LSKVDHSTIEYLPFRKDFYVEVPEI 296
EY ++ ED+ S A +L Q+KE L+K + +L FY + I
Sbjct: 121 EYICDKTDEDVCSLECKAKHLLQMQEKEEKLKSAHLAKGESQEESHLLNTAYFYKDHSFI 180
Query: 297 ARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQA 356
+ GI ++G+ PRPI + CG + + LK YE PTPIQ Q
Sbjct: 181 LSLQDEQVENLKLQL-GIAIQGQQVPRPIIEFEHCGFPETLNSNLKNSGYEVPTPIQMQM 239
Query: 357 IPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIG 416
IP + GRD++ A TGSGKT AF+LP++ +L+ ET+ P A+I++PTREL +QI
Sbjct: 240 IPVGLLGRDIVASADTGSGKTAAFLLPVIMKVLN-----ETETPSALILAPTRELAIQIE 294
Query: 417 KEAKKFTKSL-GLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 475
++AK+ L +R V + GG + Q+ LK+ ++I+ TPGR++++L +S L
Sbjct: 295 RQAKELMAGLPNMRTVLLVGGLPLPPQLHRLKQSVKVIIATPGRLLEILRQSS---VQLH 351
Query: 476 RVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEI 535
+ +V+DE D M MGF+ QV+ I++++ D QT++ SAT P +E LA ++L+ + I
Sbjct: 352 GIKIVVVDEVDTMLKMGFQQQVLDILEDISHDHQTILVSATIPVGIEHLANQLLHNFVRI 411
Query: 536 QVGGRSVVCKEVEQHVI-VXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
+G +++ C V Q ++ V + V+VFVD + AD L
Sbjct: 412 TIGEKNLPCSNVRQIILWVEEPSKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL 466
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 105/279 (37%), Positives = 161/279 (57%)
Query: 313 GIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKT 372
GI V+G+G PRPI + CG + + LK YE PTPIQ Q IP + GRDL+ A T
Sbjct: 178 GIVVEGRGVPRPIIDFGHCGFPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADT 237
Query: 373 GSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLG-LRVV 431
GSGKT AF+LP++ L Q + P A++++PTREL +QI ++AK+ L +R
Sbjct: 238 GSGKTAAFLLPVITRALVQ-----SKAPSALVLTPTRELAIQIERQAKELMGGLPRMRTA 292
Query: 432 CVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDM 491
+ GG Q+ L++ ++I+ TPGR++D++ +S +L + +V+DEAD M M
Sbjct: 293 LLVGGLPAPPQLHRLRQRVQVIIATPGRLLDIMKQSS---VDLGNIKIVVVDEADTMLKM 349
Query: 492 GFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV 551
GF+ QV+ +++NV D QT++ SAT P ++E LA R+L+ P+ + G +++ C V Q V
Sbjct: 350 GFQEQVLDVLENVPQDCQTILVSATIPTRIEQLASRLLHDPVRVLAGEKNLPCPSVRQIV 409
Query: 552 I-VXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
+ V + V+VFVD + AD L
Sbjct: 410 LWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL 448
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 99/265 (37%), Positives = 156/265 (58%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T++Q G+ ++L+ L + PTPIQ QAIP ++ G+D++ A+TG+GKT AF LPL++
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 387 HILDQPPLEETDGP--MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQIS 444
++QP E + A+++ PTREL Q+ + + K L++V VYGGT + Q++
Sbjct: 67 RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLN 126
Query: 445 ELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNV 504
L+ G +I++ TPGR++D S L +V +VLDEADRM DMGF P + R++ +
Sbjct: 127 HLRGGVDILIATPGRLLDHAHVKS---LFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRL 183
Query: 505 RPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXX 564
P RQT+ FSATF +++A+A RI+ PIE+QV + + V+Q V
Sbjct: 184 SPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLS 243
Query: 565 XXXGIYQDQGSVIVFVDKQENADSL 589
G Q V+VF ++ +D+L
Sbjct: 244 YLIGSKNWQ-QVLVFTKTRQGSDAL 267
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 99/265 (37%), Positives = 156/265 (58%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T++Q G+ ++L+ L + PTPIQ QAIP ++ G+D++ A+TG+GKT AF LPL++
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 387 HILDQPPLEETDGP--MAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQIS 444
++QP E + A+++ PTREL Q+ + + K L++V VYGGT + Q++
Sbjct: 67 RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLN 126
Query: 445 ELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNV 504
L+ G +I++ TPGR++D S L +V +VLDEADRM DMGF P + R++ +
Sbjct: 127 HLRGGVDILIATPGRLLDHAHVKS---LFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRL 183
Query: 505 RPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXX 564
P RQT+ FSATF +++A+A RI+ PIE+QV + + V+Q V
Sbjct: 184 SPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLS 243
Query: 565 XXXGIYQDQGSVIVFVDKQENADSL 589
G Q V+VF ++ +D+L
Sbjct: 244 YLIGSKNWQ-QVLVFTKTRQGSDAL 267
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 122/367 (33%), Positives = 186/367 (50%)
Query: 233 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSK-VDHSTIEYLPFRKDFYV 291
K K E +E+ E +EE++ L S A A KE++K + + +R Y+
Sbjct: 91 KEKAEARKESAK--EKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWRAPRYI 148
Query: 292 EVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTP 351
AR I V+G+G P PIK++ + IL LKK+ ++PTP
Sbjct: 149 LAMSEARHNRVRKKYH------ILVEGEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTP 202
Query: 352 IQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPT 408
IQ Q IP I+SGRD+IGIA TGSGKT+ F LP++ L+Q P + +GP +I+ P+
Sbjct: 203 IQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPS 262
Query: 409 RELCMQIGKEAKKFTKSLG------LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMID 462
REL Q + + + L LR GG + EQ+ +K G ++V TPGR++D
Sbjct: 263 RELARQTHGIIEYYCRLLQEDSLPPLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMD 322
Query: 463 MLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQME 522
+L ++ +L Y+ LDEADRM DMGFE + I + RQT++FSAT P++++
Sbjct: 323 LLQK---KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQ 379
Query: 523 ALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDK 582
A+ L KPI I VG +V Q V + + V++F +K
Sbjct: 380 NFAKSALVKPITINVGRAGAASLDVVQEV--EYVKEEAKMVYLLECLQKTPPPVLIFAEK 437
Query: 583 QENADSL 589
+ + D++
Sbjct: 438 KADVDAI 444
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 96/207 (46%), Positives = 136/207 (65%)
Query: 332 GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQ 391
G + + YE PTPIQAQAIPA+M+GRD++G+A+TG+GKT AF LP+L H L Q
Sbjct: 7 GFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPIL-HRLQQ 65
Query: 392 PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAE 451
E A++++PTREL QI + LR V VYGG G++ Q+ +LK GAE
Sbjct: 66 G---ERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAE 122
Query: 452 IIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV 511
++V PGR++D +A G + +L R+ +VLDEAD+MFDMGF P + R++ ++ P RQT+
Sbjct: 123 VVVACPGRLLDHIA--QGTI-DLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTL 179
Query: 512 MFSATFPRQMEALARRILNKPIEIQVG 538
+FSAT P + LA+ IL P+ +QVG
Sbjct: 180 LFSATMPIDIRTLAQDILVDPVTVQVG 206
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 463 (168.0 bits), Expect = 7.7e-44, P = 7.7e-44
Identities = 105/293 (35%), Positives = 159/293 (54%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G P P+ T+ + ++ + Y+ PTP+Q +IP +M+GRDL+ A+TG
Sbjct: 174 VEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQTG 233
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETD--G------PMAIIMSPTRELCMQIGKEAKK 421
SGKT F+ P+L PP G P ++I++PTREL QI EA+K
Sbjct: 234 SGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDEARK 293
Query: 422 FTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIV 481
F +R VYGG I Q+ +++RG +++V TPGR++D++ GR++ L + Y++
Sbjct: 294 FAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLI--ERGRIS-LVNIKYLI 350
Query: 482 LDEADRMFDMGFEPQVMRIID-----NVRPDRQTVMFSATFPRQMEALARRILNKPIEIQ 536
LDEADRM DMGFEPQ+ RI++ NV DRQT+MFSATFPR ++ LAR L + +
Sbjct: 351 LDEADRMLDMGFEPQIRRIVEGEDMPNVN-DRQTLMFSATFPRDIQMLARDFLKDYVFLS 409
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
VG + + Q V + G ++FV+ + AD+L
Sbjct: 410 VGRVGSTSENITQKVEYVEDHDKRSVLLDILHTHGTTGLTLIFVETKRMADAL 462
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 111/304 (36%), Positives = 168/304 (55%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G CP I+ ++ + + I+ ++ Y +PTP+Q AIP I RDL+ A+TG
Sbjct: 161 VEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 220
Query: 374 SGKTVAFVLPLLRHILDQPPLE-----ETDG--------PMAIIMSPTRELCMQIGKEAK 420
SG T AF+LP+L I P E + +G P++++++PTREL +QI +EA+
Sbjct: 221 SGCTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEAR 280
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF+ +R VYGG +QI +L+RG ++V TPGR++DM+ G++ L Y+
Sbjct: 281 KFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDFCKYL 337
Query: 481 VLDEADRMFDMGFEPQVMRII--DNVRPD--RQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ RI+ D + P R T+MFSATFP++++ LAR L++ I +
Sbjct: 338 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 397
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL---LFHS 593
VG + + Q V+ +VFV+ ++ ADSL LF
Sbjct: 398 VGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGRDSLTLVFVETKKGADSLENFLFQE 457
Query: 594 MDPC 597
C
Sbjct: 458 RYAC 461
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 99/236 (41%), Positives = 145/236 (61%)
Query: 322 PRPIKTWAQC-GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAF 380
P P+ ++ Q G + I+ ++K +EKP+PIQ+Q P ++SG+D IG+++TGSGKT+AF
Sbjct: 79 PPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAF 138
Query: 381 VLPLLRHILDQ-PPLEETD-----GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVY 434
+LP L HI Q E+ D P +++SPTREL QI E KK++ + G + VC+Y
Sbjct: 139 LLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYN-GYKSVCLY 197
Query: 435 GGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFE 494
GG EQ+ + G EI++ TPGR+ D+ +N G V +L VTY+VLDEADRM DMGFE
Sbjct: 198 GGGSRPEQVEACRGGVEIVIATPGRLTDL--SNDG-VISLASVTYVVLDEADRMLDMGFE 254
Query: 495 PQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVV-CKEVEQ 549
+ RI+ +RPDR + SAT+P + L + + + G + CK V Q
Sbjct: 255 VAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQ 310
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 462 (167.7 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 105/296 (35%), Positives = 166/296 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G P PI ++ + + +++ ++ + KPTP+Q ++P + +GRDL+ A+TG
Sbjct: 174 VEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTG 233
Query: 374 SGKTVAFVLPLLRH-ILDQP-PLEETDG--------PMAIIMSPTRELCMQIGKEAKKFT 423
SGKT F+ P+L + P P+ E++G P ++M+PTREL QI +E+KKF+
Sbjct: 234 SGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFS 293
Query: 424 KSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLD 483
+R VYGG I +Q+ + RG +++V TPGR+ D+L + G+V+ L + Y+VLD
Sbjct: 294 YRSWVRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLL--DRGKVS-LANIRYLVLD 350
Query: 484 EADRMFDMGFEPQVMRIIDNV-RP---DRQTVMFSATFPRQMEALARRILNKPIEIQVGG 539
EADRM DMGFEPQ+ I++ P DRQT+MFSATFPR ++ LAR L + + VG
Sbjct: 351 EADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGR 410
Query: 540 RSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFHSMD 595
+ + Q ++ + G IVF + + AD+L + D
Sbjct: 411 VGSTSENITQKILYVEDDEKKSVILDLLSA-NENGLTIVFTETKRMADNLADYLYD 465
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 461 (167.3 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 105/267 (39%), Positives = 152/267 (56%)
Query: 241 ENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMT 300
++ GL + E + A L Q+K K+D + P+R E P + M
Sbjct: 174 KSNSGLIQRLLQGTEQDKARAHELIQLQEKRAKKIDWDDV---PWR-----EKP-LEAMK 224
Query: 301 PXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAI 360
P I +KG P P++ W + G+ ++L LKK NY++P+ IQ AIP +
Sbjct: 225 PRDWRILKEDY-NISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVL 283
Query: 361 MSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETD---GPMAIIMSPTRELCMQIGK 417
+ +DLIGIA+TGSGKT AF++PL+ I PPL E++ GP A++++PTREL QI
Sbjct: 284 LQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQV 343
Query: 418 EAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRV 477
E KF + LG R V V GG EQ ++ +GA I+V TPGR++D L R+ L +
Sbjct: 344 EGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLER---RLFVLSQC 400
Query: 478 TYIVLDEADRMFDMGFEPQVMRIIDNV 504
TY+V+DEADRM DMGFE V +I+ ++
Sbjct: 401 TYVVMDEADRMLDMGFEDDVNKILSSL 427
Score = 205 (77.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 59/208 (28%), Positives = 96/208 (46%)
Query: 399 GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPG 458
GP A++++PTREL QI E KF + LG R V V GG EQ ++ +GA I+V TPG
Sbjct: 325 GPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPG 384
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEA-DRMFD------MGFEPQ---------VMRIID 502
R++D L ++ V D D F+ + P ++ +
Sbjct: 385 RLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATAN 444
Query: 503 NVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV-IVXXXXXXXX 561
+ RQT+MFSAT P ++ LA+ L +P+ + +G VEQ V ++
Sbjct: 445 SSSSRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWR 504
Query: 562 XXXXXXGIYQDQGSVIVFVDKQENADSL 589
+ +I+FV+ + N +++
Sbjct: 505 RVEEILESNRFSPPIIIFVNLKRNIEAI 532
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 466 (169.1 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 98/200 (49%), Positives = 129/200 (64%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KG P PI++W + IL+ + K Y++PTPIQ QAIP + RD+IG+A+TG
Sbjct: 378 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETG 437
Query: 374 SGKTVAFVLPLLRHILDQPPL---EETD-GPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF++PLL I P + EE+D GP AII++PTREL QI +E KF K LG+R
Sbjct: 438 SGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIR 497
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V V GG +Q L+ G EI++ TPGR+ID+L R L R TY+VLDEADRM
Sbjct: 498 TVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL---ENRYLVLSRCTYVVLDEADRMI 554
Query: 490 DMGFEPQVMRIIDNVRPDRQ 509
DMGFEP V +I++++ Q
Sbjct: 555 DMGFEPDVQKILEHMPVSNQ 574
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 466 (169.1 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 98/200 (49%), Positives = 129/200 (64%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KG P PI++W + IL+ + K Y++PTPIQ QAIP + RD+IG+A+TG
Sbjct: 379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETG 438
Query: 374 SGKTVAFVLPLLRHILDQPPL---EETD-GPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF++PLL I P + EE+D GP AII++PTREL QI +E KF K LG+R
Sbjct: 439 SGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIR 498
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V V GG +Q L+ G EI++ TPGR+ID+L R L R TY+VLDEADRM
Sbjct: 499 TVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL---ENRYLVLSRCTYVVLDEADRMI 555
Query: 490 DMGFEPQVMRIIDNVRPDRQ 509
DMGFEP V +I++++ Q
Sbjct: 556 DMGFEPDVQKILEHMPVSNQ 575
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 466 (169.1 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 98/200 (49%), Positives = 129/200 (64%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KG P PI++W + IL+ + K Y++PTPIQ QAIP + RD+IG+A+TG
Sbjct: 379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETG 438
Query: 374 SGKTVAFVLPLLRHILDQPPL---EETD-GPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF++PLL I P + EE+D GP AII++PTREL QI +E KF K LG+R
Sbjct: 439 SGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIR 498
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V V GG +Q L+ G EI++ TPGR+ID+L R L R TY+VLDEADRM
Sbjct: 499 TVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL---ENRYLVLSRCTYVVLDEADRMI 555
Query: 490 DMGFEPQVMRIIDNVRPDRQ 509
DMGFEP V +I++++ Q
Sbjct: 556 DMGFEPDVQKILEHMPVSNQ 575
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 466 (169.1 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 98/200 (49%), Positives = 129/200 (64%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KG P PI++W + IL+ + K Y++PTPIQ QAIP + RD+IG+A+TG
Sbjct: 379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETG 438
Query: 374 SGKTVAFVLPLLRHILDQPPL---EETD-GPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF++PLL I P + EE+D GP AII++PTREL QI +E KF K LG+R
Sbjct: 439 SGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIR 498
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V V GG +Q L+ G EI++ TPGR+ID+L R L R TY+VLDEADRM
Sbjct: 499 TVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL---ENRYLVLSRCTYVVLDEADRMI 555
Query: 490 DMGFEPQVMRIIDNVRPDRQ 509
DMGFEP V +I++++ Q
Sbjct: 556 DMGFEPDVQKILEHMPVSNQ 575
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 105/290 (36%), Positives = 161/290 (55%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ GK P PI ++ + + +++ +K ++ KPTP+Q +IP + GRDL+ A+TG
Sbjct: 142 VDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTG 201
Query: 374 SGKTVAFVLPLLRHILDQPPL---EETDG-------PMAIIMSPTRELCMQIGKEAKKFT 423
SGKT F+ PL + P E+ P A++++PTREL QI +EA+KFT
Sbjct: 202 SGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFT 261
Query: 424 KSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLD 483
+R VYGG I Q+ E+ RG +++V TPGR+ D+L G+V+ L + Y+VLD
Sbjct: 262 YRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLL--ERGKVS-LANIKYLVLD 318
Query: 484 EADRMFDMGFEPQVMRIIDNV-RP---DRQTVMFSATFPRQMEALARRILNKPIEIQVGG 539
EADRM DMGFEPQ+ I++ P +RQT+MFSATFP ++ LAR L+ I + VG
Sbjct: 319 EADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGR 378
Query: 540 RSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
+ + Q ++ + +G ++FV+ + AD L
Sbjct: 379 VGSTSENITQRILYVDDMDKKSALLDLLSA-EHKGLTLIFVETKRMADQL 427
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 464 (168.4 bits), Expect = 2.6e-43, P = 2.6e-43
Identities = 98/200 (49%), Positives = 129/200 (64%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KG P PI++W + IL+ + K Y++PTPIQ QAIP + RD+IG+A+TG
Sbjct: 379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETG 438
Query: 374 SGKTVAFVLPLLRHILDQPPL---EETD-GPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF++PLL I P + EE+D GP AII++PTREL QI +E KF K LG+R
Sbjct: 439 SGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIR 498
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V V GG +Q L+ G EI++ TPGR+ID+L R L R TY+VLDEADRM
Sbjct: 499 PVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL---ENRYLVLSRCTYVVLDEADRMI 555
Query: 490 DMGFEPQVMRIIDNVRPDRQ 509
DMGFEP V +I++++ Q
Sbjct: 556 DMGFEPDVQKILEHMPVSNQ 575
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 462 (167.7 bits), Expect = 4.4e-43, P = 4.4e-43
Identities = 99/203 (48%), Positives = 130/203 (64%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KG P PI+ W + + IL+ ++K Y+ PTPIQ QAIP + RD+IG+A+TG
Sbjct: 366 ITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVAETG 425
Query: 374 SGKTVAFVLPLLRHILDQPPL---EETD-GPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF++PLL I P + E++D GP AII++PTREL QI +E KF K LG+R
Sbjct: 426 SGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQQIEEETIKFGKPLGIR 485
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V V GG +Q L+ G EI++ TPGR+ID+L R L R TY+VLDEADRM
Sbjct: 486 TVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL---ENRYLVLSRCTYVVLDEADRMI 542
Query: 490 DMGFEPQVMRIID-----NVRPD 507
DMGFEP V +I++ N +PD
Sbjct: 543 DMGFEPDVQKILEYIPVTNQKPD 565
Score = 221 (82.9 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 69/218 (31%), Positives = 101/218 (46%)
Query: 395 EETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIV 454
+ GP AII++PTREL QI +E KF K LG+R V V GG +Q L+ G EI++
Sbjct: 451 DSDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVI 510
Query: 455 CTPGRMIDMLAANSGRVTNLRRVTYIVLDEA-DRMFDMGFEPQVMRI-IDNVRPD----- 507
TPGR+ID+L ++ V D D F+ + + I + N +PD
Sbjct: 511 ATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDDAE 570
Query: 508 ----------------RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV 551
RQTVMF+AT P +E LAR L +P + +G + VEQ V
Sbjct: 571 DPEKMMQNFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKV 630
Query: 552 IVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
I+ + +I+FV++++ D L
Sbjct: 631 ILMSEGEKRKKLLEVLASGFEP-PIIIFVNQKKGCDVL 667
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 119/354 (33%), Positives = 186/354 (52%)
Query: 247 EYSSEEEQEDLTSTAAN----LASKQKKELSKVDH----STIEYLPFRKDF-YVEVPEIA 297
EY ++ ED+ S L K+K+E SK+ + + P + Y E P I
Sbjct: 116 EYICDKTDEDVCSLECKAKHLLQVKEKEEKSKLSNPQKADSEPESPLNASYVYKEHPFIL 175
Query: 298 RMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAI 357
+ GI V+G+ RPI + C + + + LKK YE PTPIQ Q I
Sbjct: 176 NLQEDQIENLKQQL-GILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMI 234
Query: 358 PAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGK 417
P + GRD++ A TGSGKT AF+LP++ L E+ P A+I++PTREL +QI +
Sbjct: 235 PVGLLGRDILASADTGSGKTAAFLLPVIMRALF-----ESKTPSALILTPTRELAIQIER 289
Query: 418 EAKKFTKSLG-LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 476
+AK+ L ++ V + GG + Q+ L++ ++I+ TPGR++D++ +S L
Sbjct: 290 QAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSS---VELCG 346
Query: 477 VTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQ 536
V +V+DEAD M MGF+ QV+ I++N+ D QT++ SAT P +E LA ++L+ P+ I
Sbjct: 347 VKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRII 406
Query: 537 VGGRSVVCKEVEQHVI-VXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
G +++ C V Q ++ V + V+VFVD + AD L
Sbjct: 407 TGEKNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL 460
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 119/354 (33%), Positives = 186/354 (52%)
Query: 247 EYSSEEEQEDLTSTAAN----LASKQKKELSKVDH----STIEYLPFRKDF-YVEVPEIA 297
EY ++ ED+ S L K+K+E SK+ + + P + Y E P I
Sbjct: 116 EYICDKTDEDVCSLECKAKHLLQVKEKEEKSKLSNPQKADSEPESPLNASYVYKEHPFIL 175
Query: 298 RMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAI 357
+ GI V+G+ RPI + C + + + LKK YE PTPIQ Q I
Sbjct: 176 NLQEDQIENLKQQL-GILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMI 234
Query: 358 PAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGK 417
P + GRD++ A TGSGKT AF+LP++ L E+ P A+I++PTREL +QI +
Sbjct: 235 PVGLLGRDILASADTGSGKTAAFLLPVIMRALF-----ESKTPSALILTPTRELAIQIER 289
Query: 418 EAKKFTKSLG-LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 476
+AK+ L ++ V + GG + Q+ L++ ++I+ TPGR++D++ +S L
Sbjct: 290 QAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSS---VELCG 346
Query: 477 VTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQ 536
V +V+DEAD M MGF+ QV+ I++N+ D QT++ SAT P +E LA ++L+ P+ I
Sbjct: 347 VKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRII 406
Query: 537 VGGRSVVCKEVEQHVI-VXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
G +++ C V Q ++ V + V+VFVD + AD L
Sbjct: 407 TGEKNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL 460
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 117/354 (33%), Positives = 181/354 (51%)
Query: 246 LEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEY-LPFRKDFYVEVPEIARMTPXXX 304
+E EE++ + S A A EL+K I+Y P + + + P R
Sbjct: 102 VEKQLREEEKIMESIAQQKALMGVAELAK----GIQYEQPIKTAW--KPPRYIREMSEEE 155
Query: 305 XXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGR 364
I V+G+ PI+++ + K IL+ L + + PTPIQ Q +P +++GR
Sbjct: 156 REAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGR 215
Query: 365 DLIGIAKTGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTRELCMQIGKEAKK 421
DLIGIA TGSGKT+ FVLP++ L+Q P E +GP +I+ P+REL Q + +
Sbjct: 216 DLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQH 275
Query: 422 FTKSL---GLRVV--CV-YGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 475
++K L G+ + C+ GG +SE + + RG I+V TPGR++DML ++ L
Sbjct: 276 YSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDML---DKKILTLD 332
Query: 476 RVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEI 535
Y+ +DEADRM DMGFE V I + RQT++FSAT P++++ AR L KP+ I
Sbjct: 333 MCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTI 392
Query: 536 QVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
VG V Q V + + V++F +K+++ D +
Sbjct: 393 NVGRAGAASMNVTQQV--EYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCI 444
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 120/366 (32%), Positives = 182/366 (49%)
Query: 233 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 292
K K E +E+ E +EE++ L S A A KE++K I Y K +
Sbjct: 95 KEKAEARKESAK--EKQLKEEEKILESVAEGRALMSVKEMAK----GITYDDPIKTSWTP 148
Query: 293 VPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPI 352
+ M+ I V+G G P PIK++ + IL LKK+ PTPI
Sbjct: 149 PRYVLSMSEERHERVRKKYH-ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPI 207
Query: 353 QAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTR 409
Q Q IP I+SGRD+IGIA TGSGKT+ F LP++ L+Q P + +GP +I+ P+R
Sbjct: 208 QIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSR 267
Query: 410 ELCMQIGKEAKKFTKSLG------LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDM 463
EL Q + + + L LR GG + EQ+ ++ G ++V TPGR++D+
Sbjct: 268 ELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDL 327
Query: 464 LAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 523
L ++ +L Y+ LDEADRM DMGFE + I + RQT++FSAT P++++
Sbjct: 328 LQK---KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQN 384
Query: 524 LARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQ 583
A+ L KP+ I VG +V Q V + + V++F +K+
Sbjct: 385 FAKSALVKPVTINVGRAGAASLDVIQEV--EYVKEEAKMVYLLECLQKTPPPVLIFAEKK 442
Query: 584 ENADSL 589
+ D++
Sbjct: 443 ADVDAI 448
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 120/366 (32%), Positives = 182/366 (49%)
Query: 233 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 292
K K E +E+ E +EE++ L S A A KE++K I Y K +
Sbjct: 95 KEKAEARKESAK--EKQLKEEEKILESVAEGRALMSVKEMAK----GITYDDPIKTSWTP 148
Query: 293 VPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPI 352
+ M+ I V+G G P PIK++ + IL LKK+ PTPI
Sbjct: 149 PRYVLSMSEERHERVRKKYH-ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPI 207
Query: 353 QAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTR 409
Q Q IP I+SGRD+IGIA TGSGKT+ F LP++ L+Q P + +GP +I+ P+R
Sbjct: 208 QIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSR 267
Query: 410 ELCMQIGKEAKKFTKSLG------LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDM 463
EL Q + + + L LR GG + EQ+ ++ G ++V TPGR++D+
Sbjct: 268 ELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDL 327
Query: 464 LAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 523
L ++ +L Y+ LDEADRM DMGFE + I + RQT++FSAT P++++
Sbjct: 328 LQK---KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQN 384
Query: 524 LARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQ 583
A+ L KP+ I VG +V Q V + + V++F +K+
Sbjct: 385 FAKSALVKPVTINVGRAGAASLDVIQEV--EYVKEEAKMVYLLECLQKTPPPVLIFAEKK 442
Query: 584 ENADSL 589
+ D++
Sbjct: 443 ADVDAI 448
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 120/366 (32%), Positives = 182/366 (49%)
Query: 233 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 292
K K E +E+ E +EE++ L S A A KE++K I Y K +
Sbjct: 113 KEKAEARKESAK--EKQLKEEEKILESVAEGRALMSVKEMAK----GITYDDPIKTSWTP 166
Query: 293 VPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPI 352
+ M+ I V+G G P PIK++ + IL LKK+ PTPI
Sbjct: 167 PRYVLSMSEERHERVRKKYH-ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPI 225
Query: 353 QAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTR 409
Q Q IP I+SGRD+IGIA TGSGKT+ F LP++ L+Q P + +GP +I+ P+R
Sbjct: 226 QIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSR 285
Query: 410 ELCMQIGKEAKKFTKSLG------LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDM 463
EL Q + + + L LR GG + EQ+ ++ G ++V TPGR++D+
Sbjct: 286 ELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDL 345
Query: 464 LAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 523
L ++ +L Y+ LDEADRM DMGFE + I + RQT++FSAT P++++
Sbjct: 346 LQK---KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQN 402
Query: 524 LARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQ 583
A+ L KP+ I VG +V Q V + + V++F +K+
Sbjct: 403 FAKSALVKPVTINVGRAGAASLDVIQEV--EYVKEEAKMVYLLECLQKTPPPVLIFAEKK 460
Query: 584 ENADSL 589
+ D++
Sbjct: 461 ADVDAI 466
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 120/366 (32%), Positives = 182/366 (49%)
Query: 233 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 292
K K E +E+ E +EE++ L S A A KE++K I Y K +
Sbjct: 95 KEKAEARKESAK--EKQLKEEEKILESVAEGRALMSVKEMAK----GITYDDPIKTSWTP 148
Query: 293 VPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPI 352
+ M+ I V+G G P PIK++ + IL LKK+ PTPI
Sbjct: 149 PRYVLSMSEERHERVRKKYH-ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPI 207
Query: 353 QAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTR 409
Q Q IP I+SGRD+IGIA TGSGKT+ F LP++ L+Q P + +GP +I+ P+R
Sbjct: 208 QIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSR 267
Query: 410 ELCMQIGKEAKKFTKSLG------LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDM 463
EL Q + + + L LR GG + EQ+ ++ G ++V TPGR++D+
Sbjct: 268 ELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDL 327
Query: 464 LAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 523
L ++ +L Y+ LDEADRM DMGFE + I + RQT++FSAT P++++
Sbjct: 328 LQK---KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQN 384
Query: 524 LARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQ 583
A+ L KP+ I VG +V Q V + + V++F +K+
Sbjct: 385 FAKSALVKPVTINVGRAGAASLDVIQEV--EYVKEEAKMVYLLECLQKTPPPVLIFAEKK 442
Query: 584 ENADSL 589
+ D++
Sbjct: 443 ADVDAI 448
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 102/293 (34%), Positives = 162/293 (55%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G G P+ + ++ +L +K Y +PTP+Q +IP + SGRDL+ A+TG
Sbjct: 158 VEVSG-GDIEPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTG 216
Query: 374 SGKTVAFVLPLLRHILDQ-P---PLEETDG---------PMAIIMSPTRELCMQIGKEAK 420
SGKT F+ P+L D+ P P+++ G P +I++PTREL QI +E++
Sbjct: 217 SGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESR 276
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
KF +R VYGG I QI ++ +G +++ TPGR++D++ + GR++ L + ++
Sbjct: 277 KFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLI--DRGRIS-LANIKFL 333
Query: 481 VLDEADRMFDMGFEPQVMRIIDNVR----PDRQTVMFSATFPRQMEALARRILNKPIEIQ 536
VLDEADRM DMGFEPQ+ I++ +RQT+MFSATFPR ++ LAR L + +
Sbjct: 334 VLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLS 393
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
VG + + Q V+ +G ++FV+ + AD+L
Sbjct: 394 VGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTL 446
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 453 (164.5 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 95/244 (38%), Positives = 145/244 (59%)
Query: 318 GKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKT 377
G+ P PI T+ + + K ++D L ++ +KP+PIQ Q +P I+SGRD+IGIA TGSGKT
Sbjct: 214 GEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKT 273
Query: 378 VAFVLPLLRHILDQP---PLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSL----G--- 427
+ F LP++ L++ P+ + +GP +I+ P+REL Q FT +L G
Sbjct: 274 LVFTLPMVLFALEEECKLPIIQGEGPFGLILCPSRELARQTYDLVNSFTNALHKNGGHPQ 333
Query: 428 LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADR 487
LR + GG + EQ K+G +I+ TPGR++D+L N ++ N + Y+ LDEADR
Sbjct: 334 LRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLL--NKKKI-NFKLCKYLGLDEADR 390
Query: 488 MFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEV 547
+ D+GFE + ++DN RQT++FSAT P++++ AR L P+E+ VG V
Sbjct: 391 LIDLGFEDDIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVEVNVGRAGAANLNV 450
Query: 548 EQHV 551
Q V
Sbjct: 451 TQEV 454
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 451 (163.8 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 120/366 (32%), Positives = 182/366 (49%)
Query: 233 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 292
K K E +E+ E +EE++ L S A A KE++K I Y K +
Sbjct: 122 KEKAEARKESAK--EKQLKEEEKILESVAEGRALMSVKEMAK----GITYDDPIKTSWTP 175
Query: 293 VPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPI 352
+ M+ I V+G G P PIK++ + IL LKK+ PTPI
Sbjct: 176 PRYVLSMSEERHERVRKKYH-ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPI 234
Query: 353 QAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTR 409
Q Q IP I+SGRD+IGIA TGSGKT+ F LP++ L+Q P + +GP +I+ P+R
Sbjct: 235 QIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSR 294
Query: 410 ELCMQIGKEAKKFTKSLG------LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDM 463
EL Q + + + L LR GG + EQ+ ++ G ++V TPGR++D+
Sbjct: 295 ELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDL 354
Query: 464 LAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 523
L ++ +L Y+ LDEADRM DMGFE + I + RQT++FSAT P++++
Sbjct: 355 LQK---KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQN 411
Query: 524 LARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQ 583
A+ L KP+ I VG +V Q V + + V++F +K+
Sbjct: 412 FAKSALVKPVTINVGRAGAASLDVIQEV--EYVKEEAKMVYLLECLQKTPPPVLIFAEKK 469
Query: 584 ENADSL 589
+ D++
Sbjct: 470 ADVDAI 475
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 120/366 (32%), Positives = 183/366 (50%)
Query: 233 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 292
K K E +E+ E +EE++ L S A A KE++K I Y K +
Sbjct: 95 KEKAEARKESAK--EKQLKEEEKILESVAEGRALMSVKEMAK----GITYDDPIKTSWTP 148
Query: 293 VPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPI 352
+ M+ I V+G G P PIK++ + + IL LKK+ PTPI
Sbjct: 149 PRYVLSMSEERHERVRKKYH-ILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPI 207
Query: 353 QAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTR 409
Q Q IP I+SGRD+IGIA TGSGKT+ F LP++ L+Q P + +GP +I+ P+R
Sbjct: 208 QIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSR 267
Query: 410 ELCMQIGKEAKKFTKSLG------LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDM 463
EL Q + + + L LR GG + EQ+ ++ G ++V TPGR++D+
Sbjct: 268 ELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDL 327
Query: 464 LAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 523
L ++ +L Y+ LDEADRM DMGFE + I + RQT++FSAT P++++
Sbjct: 328 LQK---KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQN 384
Query: 524 LARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQ 583
A+ L KP+ I VG +V Q V + + V++F +K+
Sbjct: 385 FAKSALVKPVTINVGRAGAASLDVIQEV--EYVKEEAKMVYLLECLQKTPPPVLIFAEKK 442
Query: 584 ENADSL 589
+ D++
Sbjct: 443 ADVDAI 448
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 97/245 (39%), Positives = 148/245 (60%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + + Y KPTP+Q +P I +GRDL+ A+TG
Sbjct: 169 VDVSGTNLPAAIMTFEEAKLCESLENNISRSGYVKPTPVQKYGLPIISAGRDLMACAQTG 228
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L+ ++ E P A+I++PTREL QI +EA+KF+ +R
Sbjct: 229 SGKTAAFLLPILQQLMADGVAASRFSEIQEPEAVIVAPTRELINQIYQEARKFSFGTCVR 288
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V VYGG Q+ E+++G ++ TPGR++DM+ G+V L +V ++VLDEADRM
Sbjct: 289 PVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIGR--GKV-GLSKVRHLVLDEADRML 345
Query: 490 DMGFEPQVMRIIDNV----RPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGFEP + R++ + + +RQT+MFSATFP ++ LA L + + VG C
Sbjct: 346 DMGFEPDMRRLVGSPGMPSKEERQTLMFSATFPEDIQRLAADFLKVDYLFVAVGVVGGAC 405
Query: 545 KEVEQ 549
+VEQ
Sbjct: 406 TDVEQ 410
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 120/366 (32%), Positives = 182/366 (49%)
Query: 233 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 292
K K E +E+ E +EE++ L S A A KE++K I Y K +
Sbjct: 95 KEKAEARKESAK--EKQLKEEEKILESVAEGRALMSVKEMAK----GITYDDPIKTSWTP 148
Query: 293 VPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPI 352
+ M+ I V+G G P PIK++ + IL LKK+ PTPI
Sbjct: 149 PRYVLSMSEERHERVRKKYH-ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPI 207
Query: 353 QAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTR 409
Q Q IP I+SGRD+IGIA TGSGKT+ F LP++ L+Q P + +GP +I+ P+R
Sbjct: 208 QIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSR 267
Query: 410 ELCMQIGKEAKKFTKSLG------LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDM 463
EL Q + + + L LR GG + EQ+ ++ G ++V TPGR++D+
Sbjct: 268 ELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDL 327
Query: 464 LAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 523
L ++ +L Y+ LDEADRM DMGFE + I + RQT++FSAT P++++
Sbjct: 328 LQK---KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQN 384
Query: 524 LARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQ 583
A+ L KP+ I VG +V Q V + + V++F +K+
Sbjct: 385 FAKSALVKPVTINVGRAGAASLDVIQEV--EYVKEEAKMVYLLECLQKTPPPVLIFAEKK 442
Query: 584 ENADSL 589
+ D++
Sbjct: 443 ADVDAI 448
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 452 (164.2 bits), Expect = 3.1e-42, P = 3.1e-42
Identities = 113/301 (37%), Positives = 167/301 (55%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + K Y K TPIQ +IP I++GRDL+ A+TG
Sbjct: 274 VEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTG 333
Query: 374 SGKTVAFVLPLLRHIL----DQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ + + P AII++PTREL QI +A+KF+ +R
Sbjct: 334 SGKTAAFLLPILAHLMVKGVESSAFQTLKEPEAIIVAPTRELINQIYLDARKFSYGTCVR 393
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + + ++ G I+ TPGR++D++ +T LR Y+VLDEADRM
Sbjct: 394 PVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKEKIGLTKLR---YLVLDEADRML 450
Query: 490 DMGFEPQVMRIIDNV----RPDRQTVMFSATFPRQMEALARRILNKP--IEIQVGGRSVV 543
DMGF + ++ + + +RQT+MFSATFP +++LAR IL KP + + VG
Sbjct: 451 DMGFREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREIL-KPDYLFVVVGQVGGA 509
Query: 544 CKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGS--VIVFVDKQENADSLLFHSMDPCLEFL 601
C +VEQ VI I Q+ GS +VFV ++ AD F + C E +
Sbjct: 510 CSDVEQMVIEVDEFGKKDKLME---ILQEIGSERTMVFVKTKKKAD---FIATFLCQEKV 563
Query: 602 P 602
P
Sbjct: 564 P 564
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 104/279 (37%), Positives = 154/279 (55%)
Query: 313 GIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKT 372
GI V+G+G PRPI + CG + + LK YE PTPIQ Q IP + GRD++ A T
Sbjct: 191 GITVRGRGVPRPIVDFEHCGFPEALNRNLKASGYEVPTPIQMQMIPVGLLGRDVLASADT 250
Query: 373 GSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLG-LRVV 431
GSGKT AF+LP++ L Q + P ++++PTREL +QI ++AK+ L LR
Sbjct: 251 GSGKTAAFLLPVILRALSQ-----SKSPSGLVLTPTRELAIQIERQAKELMSGLPCLRTA 305
Query: 432 CVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDM 491
+ GG Q L++ ++I+ TPGR++D++ S L + +V+DEAD M M
Sbjct: 306 LLVGGLPAPPQRHRLRQRIQVIIATPGRLLDIIKQRS---VELGSIKIVVVDEADTMLKM 362
Query: 492 GFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV 551
GF+ QV+ +++ + D QTV+ SAT P +E LA ++L P+ I G R++ C V Q V
Sbjct: 363 GFQQQVLDVLEQLPHDCQTVLASATIPASVEQLACQLLRDPVAITAGERNLPCPSVRQIV 422
Query: 552 I-VXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
+ V + V+VFVD + AD L
Sbjct: 423 LWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL 461
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 98/247 (39%), Positives = 143/247 (57%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I V G P PIK + + +LD LK++ +PTPIQ Q +P I++GRD+IGIA TG
Sbjct: 134 IIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTG 193
Query: 374 SGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSL---G 427
SGKT+ FVLP++ L + P+ +GP+ +I+ P+REL Q + ++F L G
Sbjct: 194 SGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAG 253
Query: 428 ---LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDE 484
LR + GG + Q+ +KRG I+V TPGR+ DMLA +L Y+ LDE
Sbjct: 254 YPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKK---MSLDACRYLTLDE 310
Query: 485 ADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVC 544
ADR+ D+GFE + + D+ + RQT++FSAT P +++ AR L KP+ + VG
Sbjct: 311 ADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAAN 370
Query: 545 KEVEQHV 551
+V Q V
Sbjct: 371 LDVIQEV 377
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 95/248 (38%), Positives = 148/248 (59%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP I++GRDL+ A+TG
Sbjct: 256 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 315
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 316 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 375
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + I ++ +G I+ TPGR++D++ L+++ Y+VLDEADRM
Sbjct: 376 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQIKYLVLDEADRML 432
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT+MFSATFP +++ LA L + + VG C
Sbjct: 433 DMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGAC 492
Query: 545 KEVEQHVI 552
++V+Q V+
Sbjct: 493 RDVQQTVL 500
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 116/328 (35%), Positives = 169/328 (51%)
Query: 233 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 292
K K E +E+ E +EE++ L S A A KE++K I Y K +
Sbjct: 94 KEKAEARKESAK--EKQLKEEEKILESVAEGRALMSVKEMAK----GITYDDPIKTSWTP 147
Query: 293 VPEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPI 352
+ M+ I V+G G P PIK++ + + IL LKK+ PTPI
Sbjct: 148 PRYVLSMSEERHERVRKKYH-ILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPI 206
Query: 353 QAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTR 409
Q Q IP I+SGRD+IGIA TGSGKT+ F LP++ L+Q P + +GP +I+ P+R
Sbjct: 207 QIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSR 266
Query: 410 ELCMQIGKEAKKFTKSLG------LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDM 463
EL Q + + + L L GG + EQ+ ++ G I+V TPGR++D+
Sbjct: 267 ELARQTHGILEYYCRLLQEDSSPLLHCALCIGGVSLKEQMETMRHGVHIMVATPGRLMDL 326
Query: 464 LAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 523
L ++ +L Y+ LDEADRM DMGFE + I + RQT++FSAT P++++
Sbjct: 327 LQK---KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQN 383
Query: 524 LARRILNKPIEIQVGGRSVVCKEVEQHV 551
A+ L KP+ I VG +V Q V
Sbjct: 384 FAKSALVKPVTINVGRAGAASLDVIQEV 411
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 93/220 (42%), Positives = 132/220 (60%)
Query: 332 GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQ 391
G++ +IL +L K Y PTPIQ QAIP ++ GRD++G+A+TG+GKT+AF P+L +
Sbjct: 13 GLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDRLSRN 72
Query: 392 PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAE 451
G ++++PTREL QI + L LRVV V GG I QI +L+RGA
Sbjct: 73 ASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQLERGAH 132
Query: 452 IIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV 511
I+V TPGR+ID++ R +L +V ++LDEAD+M D+GF + I NV RQT+
Sbjct: 133 ILVATPGRLIDLMEQ---RAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPSKRQTL 189
Query: 512 MFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV 551
FSAT P+ +E+LA L P E+ V + +EQ V
Sbjct: 190 FFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRV 229
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 90/227 (39%), Positives = 146/227 (64%)
Query: 324 PIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLP 383
P K + G+S+ +L A++ + YE P+PIQAQAIPA++SGRD++ A+TG+GKT F LP
Sbjct: 5 PTK-FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLP 63
Query: 384 LLRHILDQPPLE-ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQ 442
LL+ + + ++ A+I++PTREL QI + + + K L L + V+GG I+ Q
Sbjct: 64 LLQRLSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQ 123
Query: 443 ISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIID 502
I+ L++G +++V TPGR++D+ N R ++ +LDEADRM DMGF + +++
Sbjct: 124 IARLRQGVDVLVATPGRLLDLY--NQ-RAVKFSQLEVFILDEADRMLDMGFIRDIKKLMT 180
Query: 503 NVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
+ DRQ ++FSATF ++ ALA+ ++N P+EI V + ++V Q
Sbjct: 181 ALPKDRQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQ 227
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 450 (163.5 bits), Expect = 5.4e-42, P = 5.4e-42
Identities = 102/283 (36%), Positives = 160/283 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP I++GRDL+ A+TG
Sbjct: 277 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 336
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 337 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 396
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + I ++ +G I+ TPGR++D++ LR+V Y+VLDEADRM
Sbjct: 397 AVVIYGGTQLGYSIRQIVQGCNILCATPGRLMDIIGKEK---IGLRQVKYLVLDEADRML 453
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT+MFSATFP +++ LA L + + VG C
Sbjct: 454 DMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGAC 513
Query: 545 KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
++V+Q ++ D+ ++ VFV+ ++ AD
Sbjct: 514 RDVQQTILQVGQYSKREKLVEILRSIGDERTM-VFVETKKKAD 555
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 449 (163.1 bits), Expect = 5.5e-42, P = 5.5e-42
Identities = 101/283 (35%), Positives = 160/283 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP I++GRDL+ A+TG
Sbjct: 256 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 315
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 316 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 375
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + I ++ +G I+ TPGR++D++ L+++ Y+VLDEADRM
Sbjct: 376 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQIKYLVLDEADRML 432
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT+MFSATFP +++ LA L + + VG C
Sbjct: 433 DMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGAC 492
Query: 545 KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
++V+Q V+ D+ ++ VFV+ ++ AD
Sbjct: 493 RDVQQTVLQVGQFSKREKLVEILRNIGDERTM-VFVETKKKAD 534
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 449 (163.1 bits), Expect = 6.0e-42, P = 6.0e-42
Identities = 94/246 (38%), Positives = 144/246 (58%)
Query: 346 YEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIM 405
+ P+PIQAQ+ P M RD++ IAKTGSGKT+ +++P H L + + GP +++
Sbjct: 249 FSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMH-LQRIHNDSRMGPTILVL 307
Query: 406 SPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLA 465
SPTREL QI EA KF KS + C+YGG Q+ E++RG +I+V TPGR+ D+L
Sbjct: 308 SPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILE 367
Query: 466 ANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALA 525
R++ L +V+Y+VLDEADRM DMGFEPQ+ +I++ V RQT+M++AT+P+++ +A
Sbjct: 368 MK--RIS-LHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIA 424
Query: 526 RRILNKPIEIQVGG--RSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQ 583
+L P ++ +G V K + Q + V + +I+F +
Sbjct: 425 ADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTK 484
Query: 584 ENADSL 589
D L
Sbjct: 485 RMCDQL 490
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 449 (163.1 bits), Expect = 6.2e-42, P = 6.2e-42
Identities = 99/248 (39%), Positives = 145/248 (58%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P+ I T+ + G+ + + K Y KPTP+Q IP I +GRDL+ A+TG
Sbjct: 265 VDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTPVQKHGIPIISAGRDLMACAQTG 324
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L+ + E P AII++PTREL QI EA+KF +R
Sbjct: 325 SGKTAAFLLPILQRFMTDGVAASKFSEIQEPEAIIVAPTRELINQIYLEARKFAYGTCVR 384
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V VYGG I E+ +G ++ TPGR+ D++ G++ L +V Y+VLDEADRM
Sbjct: 385 PVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGR--GKI-GLSKVRYLVLDEADRML 441
Query: 490 DMGFEPQVMRIIDNV----RPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGFEP++ +++ + + +RQT+MFSAT+P ++ +A L I + VG C
Sbjct: 442 DMGFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAADFLKVDYIFLAVGVVGGAC 501
Query: 545 KEVEQHVI 552
+VEQ V+
Sbjct: 502 SDVEQTVV 509
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 88/225 (39%), Positives = 146/225 (64%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
+++ G+S + A+ +Q Y+ P+PIQAQAIPA+++G+D++ A+TG+GKT F LPLL
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+L + ++ A++++PTREL Q+G+ + + K L LR V+GG I+ QI++L
Sbjct: 62 -LLAKGHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKL 120
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
+ G +++V TPGR++D++ N+ + L +VLDEADRM DMGF + +I+ +
Sbjct: 121 RHGVDVLVATPGRLLDLVQQNAVKFNQLE---ILVLDEADRMLDMGFIRDIKKILALLPA 177
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV 551
RQ +MFSATF ++ LA+ ++N P+EI V R+ V+Q +
Sbjct: 178 KRQNLMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWI 222
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 449 (163.1 bits), Expect = 6.7e-42, P = 6.7e-42
Identities = 101/283 (35%), Positives = 160/283 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP I++GRDL+ A+TG
Sbjct: 276 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 335
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 336 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 395
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + I ++ +G I+ TPGR++D++ L+++ Y+VLDEADRM
Sbjct: 396 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQIKYLVLDEADRML 452
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT+MFSATFP +++ LA L + + VG C
Sbjct: 453 DMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGAC 512
Query: 545 KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
++V+Q V+ D+ ++ VFV+ ++ AD
Sbjct: 513 RDVQQTVLQVGQFSKREKLVEILRNIGDERTM-VFVETKKKAD 554
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 448 (162.8 bits), Expect = 8.7e-42, P = 8.7e-42
Identities = 101/283 (35%), Positives = 160/283 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP I++GRDL+ A+TG
Sbjct: 277 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 336
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 337 SGKTAAFLLPILAHMMHDGITASCFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 396
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + I ++ +G I+ TPGR++D++ L+++ Y+VLDEADRM
Sbjct: 397 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQIKYLVLDEADRML 453
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT+MFSATFP +++ LA L + + VG C
Sbjct: 454 DMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGAC 513
Query: 545 KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
++V+Q V+ D+ ++ VFV+ ++ AD
Sbjct: 514 RDVQQTVLQVGQFSKREKLVEILRNIGDERTM-VFVETKKKAD 555
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 117/354 (33%), Positives = 185/354 (52%)
Query: 247 EYSSEEEQEDLTSTAAN----LASKQKKELSKVD--H--STIEYLPFRKDF-YVEVPEIA 297
EY ++ ED+ S L K+K+E K+ H ++ P + Y E P I
Sbjct: 117 EYICDKTDEDVCSLECKAKHLLQVKEKEERLKLSAPHKANSEPESPLNTLYVYKEHPFIL 176
Query: 298 RMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAI 357
+ GI V+G+ RPI + CG + + LK YE PTPIQ Q I
Sbjct: 177 NLQEDQIENLKRQL-GIVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMI 235
Query: 358 PAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGK 417
P + GRD++ A TGSGKT AF+LP++ L E+ P A+I++PTREL +QI
Sbjct: 236 PVGLLGRDVLASADTGSGKTAAFLLPVITRALC-----ESKTPSALILTPTRELAIQIEN 290
Query: 418 EAKKFTKSLG-LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 476
+AK+ L ++ V + GG + Q+ L++ ++I+ TPGR++D++ +S + ++
Sbjct: 291 QAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIK- 349
Query: 477 VTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQ 536
+V+DEAD M MGF+ QV+ I+++V D QT++ SAT P +E LA ++L+ P+ I
Sbjct: 350 --IVVVDEADTMLKMGFQQQVLDILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRII 407
Query: 537 VGGRSVVCKEVEQHVI-VXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
G +++ C V Q ++ V + V+VFVD + AD L
Sbjct: 408 TGEKNLPCSSVRQIILWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL 461
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 117/354 (33%), Positives = 185/354 (52%)
Query: 247 EYSSEEEQEDLTSTAAN----LASKQKKELSKVD--H--STIEYLPFRKDF-YVEVPEIA 297
EY ++ ED+ S L K+K+E K+ H ++ P + Y E P I
Sbjct: 117 EYICDKTDEDVCSLECKAKHLLQVKEKEERLKLSAPHKANSEPESPLNTLYVYKEHPFIL 176
Query: 298 RMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAI 357
+ GI V+G+ RPI + CG + + LK YE PTPIQ Q I
Sbjct: 177 NLQEDQIENLKRQL-GIVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMI 235
Query: 358 PAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGK 417
P + GRD++ A TGSGKT AF+LP++ L E+ P A+I++PTREL +QI
Sbjct: 236 PVGLLGRDVLASADTGSGKTAAFLLPVITRALC-----ESKTPSALILTPTRELAIQIEN 290
Query: 418 EAKKFTKSLG-LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 476
+AK+ L ++ V + GG + Q+ L++ ++I+ TPGR++D++ +S + ++
Sbjct: 291 QAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIK- 349
Query: 477 VTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQ 536
+V+DEAD M MGF+ QV+ I+++V D QT++ SAT P +E LA ++L+ P+ I
Sbjct: 350 --IVVVDEADTMLKMGFQQQVLDILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRII 407
Query: 537 VGGRSVVCKEVEQHVI-VXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
G +++ C V Q ++ V + V+VFVD + AD L
Sbjct: 408 TGEKNLPCSSVRQIILWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL 461
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 418 (152.2 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 86/217 (39%), Positives = 137/217 (63%)
Query: 323 RPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVL 382
RP+ ++ + I + K + KPTPIQA A P ++SG+D++G+A+TGSGKT AF +
Sbjct: 111 RPLLSFDYLSLDSSIQAEISK--FPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGV 168
Query: 383 PLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQ 442
P + H+++ ++ G +++SPTREL QI T +G++ CVYGG EQ
Sbjct: 169 PAISHLMND---QKKRGIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQ 225
Query: 443 ISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRII- 501
+LK+ ++++V TPGR++D+L S +L +V Y+VLDEADRM + GFE + II
Sbjct: 226 RIQLKK-SQVVVATPGRLLDLLQEGS---VDLSQVNYLVLDEADRMLEKGFEEDIKNIIR 281
Query: 502 DNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVG 538
+ RQT+MF+AT+P+++ LA +N PI++ +G
Sbjct: 282 ETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
Score = 38 (18.4 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 20/94 (21%), Positives = 35/94 (37%)
Query: 232 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTI-EYLPFRKDFY 290
+K K E E + + E++ + TS A+ Q + L+ + S I EY +
Sbjct: 43 KKHKKEKKGEKEVEVPEKESEKKPEPTSAVASEFYVQSEALTSLPQSDIDEYFK-ENEIA 101
Query: 291 VEVPEIARMTPXXXXXXXXXXXGIRVKGKGCPRP 324
VE + P I+ + P+P
Sbjct: 102 VEDSLDLALRPLLSFDYLSLDSSIQAEISKFPKP 135
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 442 (160.7 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 99/283 (34%), Positives = 159/283 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP +++GRDL+ A+TG
Sbjct: 250 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 309
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 310 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 369
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT I ++ +G I+ TPGR++D++ L++V Y+VLDEADRM
Sbjct: 370 AVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRML 426
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT++FSATFP +++ LA L + + VG C
Sbjct: 427 DMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGAC 486
Query: 545 KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
++V+Q ++ D+ ++ VFV+ ++ AD
Sbjct: 487 RDVQQSILQVGQYSKREKLVEILRNIGDERTM-VFVETKKKAD 528
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 444 (161.4 bits), Expect = 2.5e-41, P = 2.5e-41
Identities = 102/283 (36%), Positives = 158/283 (55%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP I GRDL+ A+TG
Sbjct: 278 VEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTG 337
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 338 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 397
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + I ++ +G I+ TPGR++D++ LR+V Y+VLDEADRM
Sbjct: 398 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEK---IGLRQVKYLVLDEADRML 454
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT+MFSATFP +++ LA L + + VG C
Sbjct: 455 DMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGAC 514
Query: 545 KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
++V+Q ++ D+ ++ VFV+ ++ AD
Sbjct: 515 RDVQQTILQVGQYSKREKLVEILRNIGDERTM-VFVETKKKAD 556
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 444 (161.4 bits), Expect = 2.5e-41, P = 2.5e-41
Identities = 102/283 (36%), Positives = 158/283 (55%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP I GRDL+ A+TG
Sbjct: 278 VEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTG 337
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 338 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 397
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + I ++ +G I+ TPGR++D++ LR+V Y+VLDEADRM
Sbjct: 398 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEK---IGLRQVKYLVLDEADRML 454
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT+MFSATFP +++ LA L + + VG C
Sbjct: 455 DMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGAC 514
Query: 545 KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
++V+Q ++ D+ ++ VFV+ ++ AD
Sbjct: 515 RDVQQTILQVGQYSKREKLVEILRNIGDERTM-VFVETKKKAD 556
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 101/282 (35%), Positives = 161/282 (57%)
Query: 313 GIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKT 372
GI V+G+ RPI + CG + + LKK YE PTPIQ Q IP + GRD++ A T
Sbjct: 190 GISVQGQDVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADT 249
Query: 373 GSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLG-LRVV 431
GSGKT AF+LP++ + ++T P A+I++PTREL +QI ++AK+ L ++ V
Sbjct: 250 GSGKTAAFLLPVIIRAFSE---DKT--PSALILTPTRELAIQIERQAKELMSGLPRMKTV 304
Query: 432 CVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDM 491
+ GG + Q+ L++ ++I+ TPGR++D++ +S +L + +V+DEAD M M
Sbjct: 305 LLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSS---VSLSGIKIVVVDEADTMLKM 361
Query: 492 GFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV 551
GF+ QV+ ++++ D QT++ SAT P +E L ++L+ P+ I G +++ C V Q +
Sbjct: 362 GFQQQVLDVLEHTPGDCQTILVSATIPDSIEQLTDQLLHNPVRIITGDKNLPCASVRQII 421
Query: 552 IVXXXXXXXXXXXXXXGIYQDQG----SVIVFVDKQENADSL 589
+ I DQ V+VFVD + AD L
Sbjct: 422 LWVEDPAKKKKLFE---ILNDQKLFKPPVLVFVDCKLGADLL 460
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 442 (160.7 bits), Expect = 3.9e-41, P = 3.9e-41
Identities = 94/245 (38%), Positives = 146/245 (59%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP I++GRDL+ A+TG
Sbjct: 274 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 333
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 334 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 393
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + I ++ +G I+ TPGR++D++ L+++ Y+VLDEADRM
Sbjct: 394 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQIKYLVLDEADRML 450
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT+MFSATFP +++ LA L + + VG C
Sbjct: 451 DMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGAC 510
Query: 545 KEVEQ 549
++V+Q
Sbjct: 511 RDVQQ 515
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 439 (159.6 bits), Expect = 7.1e-41, P = 7.1e-41
Identities = 98/283 (34%), Positives = 159/283 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP +++GRDL+ A+TG
Sbjct: 249 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 308
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 309 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 368
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + ++ +G I+ TPGR++D++ L++V Y+VLDEADRM
Sbjct: 369 AVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRML 425
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT++FSATFP +++ LA L + + VG C
Sbjct: 426 DMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGAC 485
Query: 545 KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
++V+Q ++ D+ ++ VFV+ ++ AD
Sbjct: 486 RDVQQTILQVGQYSKREKLVEILRNIGDERTM-VFVETKKKAD 527
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 439 (159.6 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 100/296 (33%), Positives = 163/296 (55%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ G P+PI ++ + + I + +K Y++PTP+Q +IPA+ GRDL+ A+TG
Sbjct: 219 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 278
Query: 374 SGKTVAFVLPLLRHILDQPP------LEETDG-----PMAIIMSPTRELCMQIGKEAKKF 422
SGKT AF++PL+ IL P + + G P A+++SPTREL +QI E++KF
Sbjct: 279 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 338
Query: 423 TKSLGLRVVCVYGGT-GISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIV 481
+ +YGG +QI +L+ G I++ TPGR+ID++ + G + + Y+V
Sbjct: 339 AYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVM--DQGLI-GMEGCRYLV 395
Query: 482 LDEADRMFDMGFEPQVMRIID-NVRPDRQ---TVMFSATFPRQMEALARRILNKP-IEIQ 536
LDEADRM DMGFEPQ+ +I++ N P ++ T MFSATFP++++ LA+ L + + +
Sbjct: 396 LDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLA 455
Query: 537 VGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSLLFH 592
VG + + Q ++ D +VFV+ + A L ++
Sbjct: 456 VGRVGSTSENIMQKIVWVEEDEKRSYLMDLLDATGDSSLTLVFVETKRGASDLAYY 511
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 96/255 (37%), Positives = 145/255 (56%)
Query: 336 KILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLE 395
+IL A+ Y+K TPIQ QAIPAI G+D++ A+TG+GKT AF LP+L+ +++ P
Sbjct: 11 EILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQKMVENPSET 70
Query: 396 ETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVC 455
+I++PTREL Q+ + + ++K L V+ +YGG + Q +LKRGA+IIV
Sbjct: 71 LKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLKRGADIIVA 130
Query: 456 TPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSA 515
TPGR+++ L A + +L V ++VLDEADRM DMGF + +I+ V RQ ++FSA
Sbjct: 131 TPGRLLEHLTACN---LSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQNLLFSA 187
Query: 516 TFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXXGIYQDQGS 575
TF ++ LA ++ KP I ++ V Q V G Q
Sbjct: 188 TFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRELLSELIGKKNWQ-Q 246
Query: 576 VIVFVDKQENADSLL 590
V+VF ++ AD+L+
Sbjct: 247 VLVFTATRDAADTLV 261
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 439 (159.6 bits), Expect = 7.8e-41, P = 7.8e-41
Identities = 93/248 (37%), Positives = 147/248 (59%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP +++GRDL+ A+TG
Sbjct: 261 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 320
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 321 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 380
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT I ++ +G I+ TPGR++D++ L++V Y+VLDEADRM
Sbjct: 381 AVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRML 437
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT++FSATFP +++ LA L + + VG C
Sbjct: 438 DMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGAC 497
Query: 545 KEVEQHVI 552
++V+Q ++
Sbjct: 498 RDVQQSIL 505
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 439 (159.6 bits), Expect = 7.8e-41, P = 7.8e-41
Identities = 93/248 (37%), Positives = 147/248 (59%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q +IP +++GRDL+ A+TG
Sbjct: 261 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 320
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ +E P II++PTREL QI EA+KF+ +R
Sbjct: 321 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 380
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT I ++ +G I+ TPGR++D++ L++V Y+VLDEADRM
Sbjct: 381 AVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRML 437
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF P++ ++I + RQT++FSATFP +++ LA L + + VG C
Sbjct: 438 DMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGAC 497
Query: 545 KEVEQHVI 552
++V+Q ++
Sbjct: 498 RDVQQSIL 505
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 95/234 (40%), Positives = 145/234 (61%)
Query: 323 RPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVL 382
RPI ++ Q ++ I L K ++KPTPIQ+ + P ++SG+D+IG+A+TGSGKT AF +
Sbjct: 152 RPILSFDQVQLTSAITSKLSK--FDKPTPIQSVSWPFLLSGKDVIGVAETGSGKTFAFGV 209
Query: 383 PLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQ 442
P + +I+ T + +SPTREL +QI + T G+ V VYGG +Q
Sbjct: 210 PAINNIITTG---NTKTLSVLCISPTRELALQIYDNLIELTADSGVNCVAVYGGVSKDDQ 266
Query: 443 ISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIID 502
I ++K A ++V TPGR++D++ N G + NL +V Y+VLDEADRM + GFE + II
Sbjct: 267 IRKIKT-ANVVVATPGRLVDLI--NDGAI-NLGKVNYLVLDEADRMLEKGFEEDIKTIIS 322
Query: 503 NV-RPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVC--KEVEQHVIV 553
N +RQT+MF+AT+P+++ LA +N P+++ VG R + K + Q V V
Sbjct: 323 NTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANKRITQVVEV 376
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 105/300 (35%), Positives = 160/300 (53%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ + G P P+ + + ++ + + K Y K TP+Q +IP I +GRDL+ A+TG
Sbjct: 155 VEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTG 214
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP++ ++ ++ P II++PTREL QI EA+KF +R
Sbjct: 215 SGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYGTCIR 274
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT I ++ +G I+ TPGR++D++ G+++ L V Y+VLDEADRM
Sbjct: 275 PVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDII--EKGKIS-LVEVKYLVLDEADRML 331
Query: 490 DMGFEPQVMRIIDNVR-PD---RQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF + ++I P RQT+MFSATFP +++ LA L I + +G C
Sbjct: 332 DMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGAC 391
Query: 545 KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGS--VIVFVDKQENADSLLFHSMDPCLEFLP 602
+V+Q+++ I Q G +VFVD ++ AD L C E LP
Sbjct: 392 SDVQQNILQVPRLSKRDKLIE---ILQSTGGERTMVFVDTKKKADYLAAFL---CQENLP 445
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 105/300 (35%), Positives = 160/300 (53%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ + G P P+ + + ++ + + K Y K TP+Q +IP I +GRDL+ A+TG
Sbjct: 155 VEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTG 214
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP++ ++ ++ P II++PTREL QI EA+KF +R
Sbjct: 215 SGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYGTCIR 274
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT I ++ +G I+ TPGR++D++ G+++ L V Y+VLDEADRM
Sbjct: 275 PVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDII--EKGKIS-LVEVKYLVLDEADRML 331
Query: 490 DMGFEPQVMRIIDNVR-PD---RQTVMFSATFPRQMEALARRILNKP-IEIQVGGRSVVC 544
DMGF + ++I P RQT+MFSATFP +++ LA L I + +G C
Sbjct: 332 DMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGAC 391
Query: 545 KEVEQHVIVXXXXXXXXXXXXXXGIYQDQGS--VIVFVDKQENADSLLFHSMDPCLEFLP 602
+V+Q+++ I Q G +VFVD ++ AD L C E LP
Sbjct: 392 SDVQQNILQVPRLSKRDKLIE---ILQSTGGERTMVFVDTKKKADYLAAFL---CQENLP 445
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 92/229 (40%), Positives = 143/229 (62%)
Query: 325 IKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPL 384
+K + + G+S+ L++ + TPIQ +AIP I+SG+D+IG AKTG+GKT+AFVLP+
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 385 LRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKF-TKSLGLRVVCVYGGTGISEQI 443
L I P E+ A+I++PTREL +QI E KK + + V+ +YGG +++Q+
Sbjct: 64 LEKI--DP---ESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQL 118
Query: 444 SELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDN 503
+LK I+V TPGR++D + + ++NL + IVLDEAD+M GF + I+D
Sbjct: 119 RKLKGNTHIVVATPGRLLDHIRRETIDLSNL---STIVLDEADQMLYFGFLYDIEDILDE 175
Query: 504 VRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
+QT++FSAT P+ ++ LA+R +++P IQV V +EQ VI
Sbjct: 176 TPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVI 224
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 83/222 (37%), Positives = 137/222 (61%)
Query: 328 WAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRH 387
++Q G+ ++ A+ + Y+ PTPIQ QAIP+I++G++++ A+TG+GKT +FVLPLL
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 388 ILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELK 447
D P + +II++PTREL +Q+ + ++ K L L + +YGG + Q L
Sbjct: 63 FADAPKIRPKR-VRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLI 121
Query: 448 RGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPD 507
G +++V TPGR++DM R V+ +VLDEADRM DMGF + II+ +
Sbjct: 122 EGVDLLVATPGRLLDMYTQ---RAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQ 178
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
RQ ++FSAT +Q++ALA+ + IEI++ ++ +++Q
Sbjct: 179 RQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQ 220
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 92/229 (40%), Positives = 143/229 (62%)
Query: 325 IKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPL 384
+K + + G+S+ L++ + TPIQ +AIP I+SG+D+IG AKTG+GKT+AFVLP+
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 385 LRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKF-TKSLGLRVVCVYGGTGISEQI 443
L I P E+ A+I++PTREL +QI E KK + + V+ +YGG +++Q+
Sbjct: 64 LEKI--DP---ESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQL 118
Query: 444 SELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDN 503
+LK I+V TPGR++D + + ++NL + IVLDEAD+M GF + I+D
Sbjct: 119 RKLKGNTHIVVATPGRLLDHIRRETIDLSNL---STIVLDEADQMLYFGFLYDIEDILDE 175
Query: 504 VRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
+QT++FSAT P+ ++ LA+R +++P IQV V +EQ VI
Sbjct: 176 TPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVI 224
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 87/217 (40%), Positives = 132/217 (60%)
Query: 335 KKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPL 394
+ I+D + + Y++PTPIQ + IPA+++G DL+GIA+TG+GKT AF LP++
Sbjct: 11 ESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKID 70
Query: 395 EETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIV 454
+ ++I++PTREL QI + ++ LGL+ VYGG G Q+ ++ G +I+V
Sbjct: 71 IKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILV 130
Query: 455 CTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFS 514
TPGR++D++ +G + N + + VLDEAD M DMGF V II + RQT++FS
Sbjct: 131 ATPGRLLDLI--ETGDI-NFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFS 187
Query: 515 ATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV 551
AT P ++E LA IL P +IQ+ +V V Q V
Sbjct: 188 ATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSV 224
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 83/222 (37%), Positives = 137/222 (61%)
Query: 328 WAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRH 387
++Q G+ ++ A+ + Y+ PTPIQ QAIP+I++G++++ A+TG+GKT +FVLPLL
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 388 ILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELK 447
D P + +II++PTREL +Q+ + ++ K L L + +YGG + Q L
Sbjct: 63 FADAPKIRPKR-VRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLI 121
Query: 448 RGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPD 507
G +++V TPGR++DM R V+ +VLDEADRM DMGF + II+ +
Sbjct: 122 EGVDLLVATPGRLLDMYTQ---RAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQ 178
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
RQ ++FSAT +Q++ALA+ + IEI++ ++ +++Q
Sbjct: 179 RQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQ 220
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 105/312 (33%), Positives = 171/312 (54%)
Query: 247 EYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKD-FYVEVPEIARMTPXXXX 305
EY +E +D+ S L KQ L +VD + + P + FYV P +
Sbjct: 39 EYICDETNDDVCS----LECKQAL-LRRVDSARV--FPATDECFYVRDPG----SSSHDA 87
Query: 306 XXXXXXXGIRVKGKGC--PRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSG 363
I V+G+G P P+ T+ CG+ K+L L+ Y+ PTPIQ QAIPA ++G
Sbjct: 88 QLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTG 147
Query: 364 RDLIGIAKTGSGKTVAFVLPLLRHIL---DQPPLEETDGPMAIIMSPTRELCMQIGKEAK 420
+ L+ A TGSGKT +F++P++ + P ++ P+A++++PTRELC+Q+ +AK
Sbjct: 148 KSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAK 207
Query: 421 KFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYI 480
K L + V GG +S Q+ +++G E+I+ TPGR++D+L+ ++ + N+ +T+
Sbjct: 208 MLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNI--MTF- 264
Query: 481 VLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGR 540
VLDE D M GF QVM+I + Q ++FSAT R++E + + + I + +G
Sbjct: 265 VLDEVDCMLQRGFRDQVMQIFQALSQP-QVLLFSATISREVEKVGGSLAKEIILVSIGNP 323
Query: 541 SVVCKEVEQHVI 552
+ K V Q I
Sbjct: 324 NKPNKAVNQLAI 335
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 95/247 (38%), Positives = 140/247 (56%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I V G+ P PIK + +L LK + PTPIQ Q +P ++SGRD+IGIA TG
Sbjct: 85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTG 144
Query: 374 SGKTVAFVLPLLRHILDQP---PLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSL---G 427
SGKT+ FVLP++ L + P+ +GP+A+++ P+REL Q ++F SL G
Sbjct: 145 SGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDG 204
Query: 428 ---LRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDE 484
LR + GG + Q+ +K+G I+V TPGR+ D+LA + R +T LDE
Sbjct: 205 YPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLT---LDE 261
Query: 485 ADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVC 544
ADR+ D+GFE + + D+ + RQT++FSAT P +++ A L KP+ + VG
Sbjct: 262 ADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAAN 321
Query: 545 KEVEQHV 551
+V Q V
Sbjct: 322 LDVIQEV 328
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 424 (154.3 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 84/230 (36%), Positives = 140/230 (60%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
++A G+S+ ++ A++ Y +PTP+Q +AIPA++ GRDL+ A+TG+GKT F LP+L
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 387 HILDQ--PPLEETDGPM---AIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISE 441
+ P + GP ++++PTREL Q+ + K + + L C++GG G++
Sbjct: 62 RLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMNP 121
Query: 442 QISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRII 501
Q+ + RG +++V PGR++D+ A G V +L V +VLDEADRM DMGF V +++
Sbjct: 122 QVQAMSRGVDVLVACPGRLLDL--AGQGSV-DLSHVEILVLDEADRMLDMGFVHDVKKVL 178
Query: 502 DNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV 551
+ RQ ++FSATF + +LA ++L+ P I+V + + +EQ V
Sbjct: 179 ARLPAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRV 228
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 94/218 (43%), Positives = 136/218 (62%)
Query: 323 RPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVL 382
RPI +++ S K L A + PT IQ+ P + +GRD+IGIA+TGSGKT+AF L
Sbjct: 71 RPIISFSFLPPSNKDLYA-PLDGFASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGL 129
Query: 383 PLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQ 442
P L+ +LD +++ P+A+++SPTREL MQI + KF + + ++V C++GG EQ
Sbjct: 130 PCLKKVLDLKTKQKSCRPLAVVISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQ 189
Query: 443 ISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIID 502
LK A ++V TPGR+ D+ N G + +L RV Y+VLDEADRM D GFE + II
Sbjct: 190 REALKSAA-VVVATPGRLKDL--QNDGSL-DLGRVKYLVLDEADRMLDKGFEQDIKDIIS 245
Query: 503 NVRPD-RQTVMFSATFPRQMEALARRILNKPIEIQVGG 539
+ RQTVMF+AT+P + LA + P+ + +GG
Sbjct: 246 PMPVSKRQTVMFTATWPPIVRNLASTFMTSPVTVTIGG 283
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 90/269 (33%), Positives = 158/269 (58%)
Query: 325 IKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPL 384
+ ++A+ G+ + + L + Y PTP+QA IPA++SGRD++ A TGSGKT AF LPL
Sbjct: 8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPL 67
Query: 385 LRHILDQPPLEETDGPM-AIIMSPTRELCMQIGKEAKKFTKSLG--LRVVCVYGGTGISE 441
L+ + + +++ G + +++ PTREL Q+ + L++V +GG ++
Sbjct: 68 LQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 442 QISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRII 501
Q+ L+ GA+++V TPGR++D+LA+N+ ++T +V+ VLDEADRM +GF ++ +++
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLT---QVSAFVLDEADRMLSLGFTEELEQVL 184
Query: 502 DNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXX 561
+ +QT++FSATFP ++ AL ++L++P+E + +S +EQ VI
Sbjct: 185 AALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHL--QSEQESTIEQRVITVNREQKTA 242
Query: 562 XXXXXXGIYQDQGS-VIVFVDKQENADSL 589
I Q Q S ++FV + + L
Sbjct: 243 LLAHL--IKQHQWSQALIFVSAKNTCNHL 269
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 90/269 (33%), Positives = 158/269 (58%)
Query: 325 IKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPL 384
+ ++A+ G+ + + L + Y PTP+QA IPA++SGRD++ A TGSGKT AF LPL
Sbjct: 8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPL 67
Query: 385 LRHILDQPPLEETDGPM-AIIMSPTRELCMQIGKEAKKFTKSLG--LRVVCVYGGTGISE 441
L+ + + +++ G + +++ PTREL Q+ + L++V +GG ++
Sbjct: 68 LQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 442 QISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRII 501
Q+ L+ GA+++V TPGR++D+LA+N+ ++T +V+ VLDEADRM +GF ++ +++
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLT---QVSAFVLDEADRMLSLGFTEELEQVL 184
Query: 502 DNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXX 561
+ +QT++FSATFP ++ AL ++L++P+E + +S +EQ VI
Sbjct: 185 AALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHL--QSEQESTIEQRVITVNREQKTA 242
Query: 562 XXXXXXGIYQDQGS-VIVFVDKQENADSL 589
I Q Q S ++FV + + L
Sbjct: 243 LLAHL--IKQHQWSQALIFVSAKNTCNHL 269
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 113/358 (31%), Positives = 180/358 (50%)
Query: 236 GELMEENQDGLEYSSEEEQEDLTSTAANLASK--QKKELSKVDHSTIEYLPFRKDFYVEV 293
GE + + D S E + L + A+ K K + +T Y +++D +
Sbjct: 85 GEYICDKTDNDICSLECKAAHLAAVCADFGDKLFNNKNTPESSENTKSY-SYKQDAF--- 140
Query: 294 PEIARMTPXXXXXXXXXXXGIRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQ 353
I+ +T + V + C RP+ + C + LK YE PTP+Q
Sbjct: 141 --ISELTEEQIERVKAELGIVSVGTEVC-RPVIEFQHCRFPTVLERNLKAAGYEAPTPVQ 197
Query: 354 AQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCM 413
Q +P ++GRD+I A TGSGKTVAF+LP++ L Q P +I++PTREL +
Sbjct: 198 MQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRAL-QSESASPSCPACLILTPTRELAI 256
Query: 414 QIGKEAKKFTKSL-GLRVVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVT 472
QI ++AK+ + L +R + GG + Q+ LK +I++ TPGR++++L + ++
Sbjct: 257 QIEEQAKELMRGLPNMRTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLEILKQKAVQLD 316
Query: 473 NLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKP 532
++R V V+DEAD M MGF+ QV+ I++ V D QT++ SAT P + LA R+ + P
Sbjct: 317 HVRTV---VVDEADTMLKMGFQQQVLDILEQVPEDHQTLLTSATIPTGTQQLAERLTHDP 373
Query: 533 IEIQVGGRSVVCKEVEQHVI-VXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
+ I +G ++ C V Q V+ V Q V+VFVD + AD L
Sbjct: 374 VTITIGQKNQPCANVRQIVLWVEEPSKKKKLFEILNDEKLYQPPVVVFVDCKLGADLL 431
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 383 (139.9 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 71/141 (50%), Positives = 101/141 (71%)
Query: 398 DGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEIIVCTP 457
DGP+ ++++PTREL Q+ + A ++ ++ L+ C+YGG QI +L+RG EI + TP
Sbjct: 87 DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATP 146
Query: 458 GRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATF 517
GR+ID L G+ TNLRR TY+VLDEADRM DMGFEPQ+ +I+D +RPDRQT+M+SAT+
Sbjct: 147 GRLIDFLEC--GK-TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 203
Query: 518 PRQMEALARRILNKPIEIQVG 538
P+++ LA L I I +G
Sbjct: 204 PKEVRQLAEDFLKDYIHINIG 224
Score = 54 (24.1 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 280 IEYLP-FRKDFYVEVPEIARMTPXXXXXXXXXXXGIRVKGKG 320
++ LP F K+FY E P++AR T I V+G G
Sbjct: 48 LDELPKFEKNFYQEHPDLARRTAQEVETYRRSKE-ITVRGDG 88
>CGD|CAL0003464 [details] [associations]
symbol:orf19.5991 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003464 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003
EMBL:AACQ01000004 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_723054.1
RefSeq:XP_723201.1 STRING:Q5ANB2 GeneID:3635229 GeneID:3635325
KEGG:cal:CaO19.13412 KEGG:cal:CaO19.5991 KO:K14808 Uniprot:Q5ANB2
Length = 908
Score = 430 (156.4 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 86/222 (38%), Positives = 140/222 (63%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
++A G++K IL + K+ Y++PTPIQ + IP IM GRD++G+A+TGSGKT AFVLPL+
Sbjct: 100 SFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIE 159
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+ + P G A+I+SP+REL +Q K+ K+F+ L+ + + GG + E S++
Sbjct: 160 RLKSRQP----GGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKM 215
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
+IIVCTPGR + + +L V YIV DEADR+F+MGF Q+ ++ ++
Sbjct: 216 MTKPDIIVCTPGRFLHLKVEMQ---YDLMTVQYIVFDEADRLFEMGFAEQLNELLASLPS 272
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVE 548
+RQ+++FSAT PR + A+ L P+ +++ S + +++
Sbjct: 273 NRQSLLFSATLPRSLVDFAKAGLTNPVLVRLDAESKISDQLQ 314
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 86/218 (39%), Positives = 137/218 (62%)
Query: 332 GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQ 391
G+S IL A++++ Y P+PIQ QAIPA+++G+D++ A+TG+GKT F LP+L +L +
Sbjct: 7 GLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILE-LLAK 65
Query: 392 PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAE 451
P + A+I++PTREL QI + + L L+ V+GG I+ Q+ + +GA+
Sbjct: 66 GPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGAD 125
Query: 452 IIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV 511
I+V TPGR++D+ N+ + L +VLDEADRM DMGF + +I+ + RQ +
Sbjct: 126 ILVATPGRLMDLYNQNAVKFDQLE---ILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 512 MFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
+FSATF ++ LA+ ++N P+EI V + + VEQ
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ 220
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 86/218 (39%), Positives = 137/218 (62%)
Query: 332 GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQ 391
G+S IL A++++ Y P+PIQ QAIPA+++G+D++ A+TG+GKT F LP+L +L +
Sbjct: 7 GLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILE-LLAK 65
Query: 392 PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAE 451
P + A+I++PTREL QI + + L L+ V+GG I+ Q+ + +GA+
Sbjct: 66 GPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGAD 125
Query: 452 IIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV 511
I+V TPGR++D+ N+ + L +VLDEADRM DMGF + +I+ + RQ +
Sbjct: 126 ILVATPGRLMDLYNQNAVKFDQLE---ILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 512 MFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
+FSATF ++ LA+ ++N P+EI V + + VEQ
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ 220
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 422 (153.6 bits), Expect = 2.4e-39, P = 2.4e-39
Identities = 89/224 (39%), Positives = 140/224 (62%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+A G+ IL+AL YEKP+PIQA+ IP +++GRD++G+A+TGSGKT AF LPLL+
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSL-GLRVVCVYGGTGISEQISE 445
+ LD P L+ P ++++PTREL +Q+ + F+K + G+ VV +YGG Q+
Sbjct: 67 N-LD-PELK---APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRA 121
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVR 505
L++G +I+V TPGR++D L + +L +++ +VLDEAD M MGF V I+ +
Sbjct: 122 LRQGPQIVVGTPGRLLDHLKRGT---LDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIP 178
Query: 506 PDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
QT +FSAT P + + RR + +P E+++ ++ Q
Sbjct: 179 EGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQ 222
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 421 (153.3 bits), Expect = 2.8e-39, P = 2.8e-39
Identities = 84/230 (36%), Positives = 139/230 (60%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
++A G+S+ ++ A++ Y +PTP+Q +AIPA++ GRDL+ A+TG+GKT F LP+L
Sbjct: 2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 387 HILDQ--PPLEETDGPM---AIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISE 441
+ P + GP ++++PTREL Q+ K + + L C++GG G++
Sbjct: 62 RLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMNP 121
Query: 442 QISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRII 501
Q+ + RG +++V PGR++D+ A G V +L V +VLDEADRM DMGF V +++
Sbjct: 122 QVQAMARGVDVLVACPGRLLDL--AGQGSV-DLSHVEILVLDEADRMLDMGFVHDVKKVL 178
Query: 502 DNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHV 551
+ RQ ++FSATF + + LA ++L+ P I+V + + +EQ V
Sbjct: 179 ARLPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRV 228
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 375 (137.1 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 81/187 (43%), Positives = 122/187 (65%)
Query: 333 VSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHIL-DQ 391
+++ +L +KK NY+K TPIQ ++ IM+ DLIG+A+TGSGKT ++LP++ H+L +
Sbjct: 369 LNELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLIND 428
Query: 392 PP----LEETDG-----------PMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGG 436
PP E+ + P+ +I++PTREL +QI +AKKF G++ V +YGG
Sbjct: 429 PPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGG 488
Query: 437 TGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQ 496
I Q+S L +GA+IIV TPGR+ D+L G++ L T++VLDEADRM DMGF PQ
Sbjct: 489 NNIKTQLSNLDKGADIIVATPGRLNDIL--EKGKI-KLFLTTFLVLDEADRMLDMGFSPQ 545
Query: 497 VMRIIDN 503
+ I+++
Sbjct: 546 IRSIVND 552
Score = 79 (32.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXX 567
RQT+MFSATF ++++ LA+ L K + VG + ++Q+++
Sbjct: 581 RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNLL 640
Query: 568 GIYQDQGSVIVFVDKQENAD 587
+ G I+FV+ + AD
Sbjct: 641 A-ENNNGLTILFVETKRKAD 659
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 375 (137.1 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 81/187 (43%), Positives = 122/187 (65%)
Query: 333 VSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHIL-DQ 391
+++ +L +KK NY+K TPIQ ++ IM+ DLIG+A+TGSGKT ++LP++ H+L +
Sbjct: 369 LNELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLIND 428
Query: 392 PP----LEETDG-----------PMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGG 436
PP E+ + P+ +I++PTREL +QI +AKKF G++ V +YGG
Sbjct: 429 PPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGG 488
Query: 437 TGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQ 496
I Q+S L +GA+IIV TPGR+ D+L G++ L T++VLDEADRM DMGF PQ
Sbjct: 489 NNIKTQLSNLDKGADIIVATPGRLNDIL--EKGKI-KLFLTTFLVLDEADRMLDMGFSPQ 545
Query: 497 VMRIIDN 503
+ I+++
Sbjct: 546 IRSIVND 552
Score = 79 (32.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXXX 567
RQT+MFSATF ++++ LA+ L K + VG + ++Q+++
Sbjct: 581 RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNLL 640
Query: 568 GIYQDQGSVIVFVDKQENAD 587
+ G I+FV+ + AD
Sbjct: 641 A-ENNNGLTILFVETKRKAD 659
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 94/229 (41%), Positives = 137/229 (59%)
Query: 324 PIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLP 383
PI + + VS K+ + LK NY++PTPIQA P +++GRD++GIA+TGSGKTVAF +P
Sbjct: 165 PILQFDELDVSAKLREGLK--NYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIP 222
Query: 384 LLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQI 443
L+++ + P +++SPTREL +Q + + L+ V VYGG SEQ
Sbjct: 223 ALQYLNGLS--DNKSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQA 280
Query: 444 SELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDN 503
K A +I+ TPGR++D++ N G + + +V Y+VLDEADRM D GFE + II +
Sbjct: 281 RAAKN-ASVIIGTPGRLLDLI--NDGSI-DCSQVGYLVLDEADRMLDTGFEQDIRNIISH 336
Query: 504 VRPD------RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKE 546
PD RQTV FSAT+P + ALA L P++I +G + +
Sbjct: 337 T-PDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQ 384
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 92/264 (34%), Positives = 147/264 (55%)
Query: 333 VSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP 392
+S IL+A+ Y KPT IQ +AIP +++G+D+I A+TG+GKT +FVLPLL + Q
Sbjct: 8 LSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQLNSQ- 66
Query: 393 PLEETDGPM------AIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+ET + A+I+ PTREL +Q+ ++ K L + + +YGG EQ L
Sbjct: 67 -YKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQKQRL 125
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
G +I+V TPGR++DM RV + + +VLDEADRM DMGF + +II+ +
Sbjct: 126 IWGVDILVATPGRLLDM---THQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLPE 182
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXX 566
RQ ++FSAT ++ LA+R ++KP+EI +G ++EQ ++
Sbjct: 183 HRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKANKSALLSHI 242
Query: 567 XGIYQDQGSVIVFVDKQENADSLL 590
Q+ ++F++ + A L+
Sbjct: 243 ITT-QNWQQALIFIETKHGAAKLV 265
>DICTYBASE|DDB_G0292992 [details] [associations]
symbol:helA "putative RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292992 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000199 KO:K14808 HSSP:P10081 EMBL:X81822
RefSeq:XP_629281.1 ProteinModelPortal:Q54CD8 STRING:Q54CD8
EnsemblProtists:DDB0215372 GeneID:8629004 KEGG:ddi:DDB_G0292992
OMA:RLPKDGH ProtClustDB:CLSZ2429315 Uniprot:Q54CD8
Length = 1091
Score = 415 (151.1 bits), Expect = 9.7e-39, Sum P(2) = 9.7e-39
Identities = 84/200 (42%), Positives = 129/200 (64%)
Query: 333 VSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQP 392
++K +L A+ K+ + PTPIQ ++IP I+ G D++G+A+TGSGKT AFV+P+++ + D
Sbjct: 237 LTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQKLGDH- 295
Query: 393 PLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAEI 452
T G A+I+SPTREL +Q K K F++ LR + + GG + +Q ++L R +I
Sbjct: 296 --STTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDI 353
Query: 453 IVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVM 512
I+ TPGR++ L +G +L +V YIV DEADR+F+MGF Q+ I+ + +RQT++
Sbjct: 354 IIATPGRLMHHLL-ETGM--SLSKVQYIVFDEADRLFEMGFNEQLTEILSKLSENRQTLL 410
Query: 513 FSATFPRQMEALARRILNKP 532
FSAT P + R LN P
Sbjct: 411 FSATLPSLLVDFVRAGLNNP 430
Score = 38 (18.4 bits), Expect = 9.7e-39, Sum P(2) = 9.7e-39
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 241 ENQDGLEYSSEEEQEDLTSTAANLASKQKKELSK 274
+N+ L+ S+E + + + S QK LSK
Sbjct: 10 KNKGNLKKSNESQNDYMKGKKLETKSYQKALLSK 43
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 419 (152.6 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 103/286 (36%), Positives = 158/286 (55%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V G P I T+ + + + + + + K Y K TP+Q IP I++GRDL+ A+TG
Sbjct: 254 VEVSGHDAPPAILTFEETDLCQTLNNDITKAGYTKLTPVQKYGIPIILAGRDLMACAQTG 313
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L H++ ++ P II++PTREL QI EA+KF+ +R
Sbjct: 314 SGKTAAFLLPILAHMMRDGVTASRFKDQQEPECIIVAPTRELINQIFLEARKFSFGTCVR 373
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V +YGGT + I ++ +G I+ TPGR++D++ L ++ Y+VLDEADRM
Sbjct: 374 PVVIYGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKEK---IGLGQIRYLVLDEADRML 430
Query: 490 DMGFEPQVMRIID----NVRPDRQTVMFSATFPR-QMEALARRIL-NKPI-EIQVGGRSV 542
DMGF P++ ++I + RQT+MFSATFPR + A L N I + VG
Sbjct: 431 DMGFGPEMKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWAGEFLKNLTICLVAVGQVGG 490
Query: 543 VCKEVEQHVI-VXXXXXXXXXXXXXXGIYQDQGSVIVFVDKQENAD 587
C +V+Q V+ V I +++ +VFV+ ++ AD
Sbjct: 491 ACSDVQQTVLQVGQYSKREKLVEILRNIGEER--TMVFVETKKKAD 534
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 389 (142.0 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 77/223 (34%), Positives = 137/223 (61%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
TW G+++ + A + ++ P+ IQ +AIP + G+D+IG+A+TGSGKT AF LP+L
Sbjct: 62 TWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILH 121
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+L+ P A++++PTREL QIG++ + +G++ V GG + Q +L
Sbjct: 122 ALLENPQRY-----FALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQL 176
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
+ II+ TPGR++D L G NL+ + Y+V+DEADR+ +M FE ++ +I+ +
Sbjct: 177 AKKPHIIIATPGRLVDHLENMKG--FNLKAIKYLVMDEADRILNMDFEVELDKILKVLPR 234
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
+R+T +FSAT ++++ L R L P++++V + ++++Q
Sbjct: 235 ERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQ 277
Score = 39 (18.8 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 232 EKAKGELMEENQDGLEYSSEEEQED 256
E+ + + +E +D SEEEQED
Sbjct: 8 EQTQLQTSDEEED---LGSEEEQED 29
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 84/226 (37%), Positives = 138/226 (61%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+A G+++ IL A+ + Y PTPIQ +AIP I+ G D+ G+A+TG+GKT AFVLP+++
Sbjct: 5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQ 64
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+ P +I+ PTREL Q+ + +K+ K L L + + GG EQ + L
Sbjct: 65 RL--STGRARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLL 122
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
+RG ++++ TPGR++D + G++ + V +++DEADRM DMGF P + +I +
Sbjct: 123 QRGVDVLIATPGRLMDQF--DRGKLL-MMGVETLIIDEADRMLDMGFIPDIEKICAKLPA 179
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
+RQT++FSATFP ++ LA+ P +I+V + + + Q V+
Sbjct: 180 NRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVV 225
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 91/265 (34%), Positives = 144/265 (54%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
+++Q G+S ++ + + Y+KPT IQ QAIP I+ GRDLI A+TG+GKT +FVLP+L
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
L Q + A+I+ PTREL MQ+ ++ +++ K GL+ + V+GG Q L
Sbjct: 62 K-LRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL 120
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
G +++V TPGR++D+ R + +VLDEADRM DMGF + +IID +
Sbjct: 121 IDGVDVLVATPGRLMDLYGQ---RAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPS 177
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXX 566
+ Q ++FSAT R++ LA+ + P EI + + Q +I
Sbjct: 178 EVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHL 237
Query: 567 XGIYQ-DQGSVIVFVDKQENADSLL 590
Q DQ ++F++ + A L+
Sbjct: 238 INEQQWDQA--LIFIETKHGAAKLV 260
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 91/265 (34%), Positives = 144/265 (54%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
+++Q G+S ++ + + Y+KPT IQ QAIP I+ GRDLI A+TG+GKT +FVLP+L
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
L Q + A+I+ PTREL MQ+ ++ +++ K GL+ + V+GG Q L
Sbjct: 62 K-LRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL 120
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
G +++V TPGR++D+ R + +VLDEADRM DMGF + +IID +
Sbjct: 121 IDGVDVLVATPGRLMDLYGQ---RAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPS 177
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXXXX 566
+ Q ++FSAT R++ LA+ + P EI + + Q +I
Sbjct: 178 EVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHL 237
Query: 567 XGIYQ-DQGSVIVFVDKQENADSLL 590
Q DQ ++F++ + A L+
Sbjct: 238 INEQQWDQA--LIFIETKHGAAKLV 260
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 82/228 (35%), Positives = 145/228 (63%)
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
KT+ + GV ++ +A +K ++ PTPIQ +AIP +++ RD+IG+A+TGSGKT AF LP++
Sbjct: 46 KTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVI 105
Query: 386 RHILDQPPLEETDGPM-AIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQIS 444
+ + + P P A++++PTREL QI ++ + S+G+R V + GG + Q
Sbjct: 106 QELWNNP------SPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAV 159
Query: 445 ELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNV 504
L + ++VCTPGR++D L G +L+ + Y+++DEADR+ DM F P + +I+ +
Sbjct: 160 ALSKKPHVLVCTPGRLMDHLENTKG--FSLKNLKYLIMDEADRLLDMDFGPIIDKILKII 217
Query: 505 RPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGR-SVVCKEVEQHV 551
+R+T++FSAT ++E L R L++P+ + V + S V +++++
Sbjct: 218 PHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYL 265
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 97/255 (38%), Positives = 149/255 (58%)
Query: 337 ILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLEE 396
I+ A+ YE+P+ IQ Q+IP I++G D+IG A+TG+GKT AF LP+L H +D P E
Sbjct: 17 IVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPIL-HRID-PSKRE 74
Query: 397 TDGPMAIIMSPTRELCMQIGKEAKKFTKSL-GLRVVCVYGGTGISEQISELKRGAEIIVC 455
P A+I++PTREL +Q+ + + K + G+ VV VYGG + Q+ ++ GA+I+V
Sbjct: 75 ---PQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQIVVA 131
Query: 456 TPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPD-RQTVMFS 514
TPGR+ D L + +V L V ++VLDEAD M +GF + +I P+ RQTV+FS
Sbjct: 132 TPGRLCDHLRRDE-KV--LATVNHLVLDEADEMLKLGFMDD-LEVIFKAMPETRQTVLFS 187
Query: 515 ATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ-HVIVXXXXXXXXXXXXXXGIYQDQ 573
AT P+ + A+A R L P +++ ++ +EQ H++V +D
Sbjct: 188 ATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHADQKTSAVLSLLE--VEDF 245
Query: 574 GSVIVFV-DKQENAD 587
++I+FV KQ D
Sbjct: 246 DALIMFVRTKQATLD 260
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 415 (151.1 bits), Expect = 6.7e-38, P = 6.7e-38
Identities = 87/234 (37%), Positives = 138/234 (58%)
Query: 315 RVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGS 374
R KGK + G+++ +L A+ K+ ++ PTPIQ + IP ++ GRD++G+A+TGS
Sbjct: 58 RTKGKKGNGKASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGS 117
Query: 375 GKTVAFVLPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVY 434
GKT AFV+P++ H+ + L ++ A+I+SP REL +Q K K F+K LR V +
Sbjct: 118 GKTAAFVIPMIEHL--KSTLANSN-TRALILSPNRELALQTVKVVKDFSKGTDLRSVAIV 174
Query: 435 GGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFE 494
GG + EQ S L +I+V TPGR + + L + Y+V DEADR+F+MGF
Sbjct: 175 GGVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMK---LELSSIEYVVFDEADRLFEMGFA 231
Query: 495 PQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVE 548
Q+ I+ + RQT++FSAT PR + A+ L P+ +++ S V +++
Sbjct: 232 AQLTEILHALPTSRQTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQ 285
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 408 (148.7 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 86/256 (33%), Positives = 144/256 (56%)
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
+T+ + G+S+ +L AL + YEKPTPIQ+ +I +M+G+D++G A+TG+GKT AF LPLL
Sbjct: 6 RTFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLL 65
Query: 386 RHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSL-GLRVVCVYGGTGISEQIS 444
+ Q P ++++PTREL +Q+ + + K + V+ +YGG + +Q++
Sbjct: 66 NKVTSQTT------PQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLN 119
Query: 445 ELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNV 504
LKRG ++IV TPGR++D + + ++ L+ +VLDEAD M MGF + I+++
Sbjct: 120 ALKRGPQVIVGTPGRVMDHMRRGTLKLETLQA---LVLDEADEMLKMGFIDDIEWILEHT 176
Query: 505 RPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXXXXXX 564
P RQ +FSAT P Q++ +A + L I + +EQ +
Sbjct: 177 PPQRQLALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHNKLEALV 236
Query: 565 XXXGIYQDQGSVIVFV 580
+ +G +I+FV
Sbjct: 237 RVLEVENTEG-IIIFV 251
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 89/228 (39%), Positives = 137/228 (60%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+A + ++L A+ YE PT IQA IPA+M+G D++G+A+TG+GKT AF +P+L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLG-LRVVCVYGGTGISEQISE 445
I D + P A+++ PTREL +Q+ + ++ L L V+ +YGG+ + Q++
Sbjct: 74 KI-DIT----SKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAG 128
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVT-NLRRVTYIVLDEADRMFDMGFEPQVMRIIDNV 504
L+RGA+++V TPGRMID L R T +L RV ++VLDEAD M MGF V RI+
Sbjct: 129 LRRGAQVVVGTPGRMIDHLE----RATLDLSRVDFLVLDEADEMLTMGFADDVERILSET 184
Query: 505 RPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
+Q +FSAT P + L+ + L+ P E+ ++ V + + Q I
Sbjct: 185 PEYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYI 232
>WB|WBGene00022378 [details] [associations]
symbol:Y94H6A.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0040010 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:FO081810
GeneID:177054 KEGG:cel:CELE_Y94H6A.5 UCSC:Y94H6A.5a CTD:177054
NextBio:895136 RefSeq:NP_741347.2 ProteinModelPortal:Q688Z4
SMR:Q688Z4 STRING:Q688Z4 PRIDE:Q688Z4 EnsemblMetazoa:Y94H6A.5b
WormBase:Y94H6A.5b InParanoid:Q688Z4 ArrayExpress:Q688Z4
Uniprot:Q688Z4
Length = 871
Score = 414 (150.8 bits), Expect = 9.2e-38, P = 9.2e-38
Identities = 80/210 (38%), Positives = 131/210 (62%)
Query: 328 WAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRH 387
W Q G+ + A++K+ + +PTPIQ + IP IM G+D++ +++TGSGKT AFV+P+L+
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 388 ILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELK 447
+ + +T G A+++SPTREL +Q K K+ + GLR C+ GG I EQ S +
Sbjct: 86 LKRR----DTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIH 141
Query: 448 RGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPD 507
+I++ TPGR++ ++ R L V Y+V DEADR+F+MGF+ Q+ + +
Sbjct: 142 ENPDILLATPGRLLHVIVEMDLR---LSYVQYVVFDEADRLFEMGFQDQLTETLKRIPES 198
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQV 537
RQT++FSAT P+ + A+ L P+ +++
Sbjct: 199 RQTLLFSATLPKMLVDFAKAGLTDPMLVRL 228
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 407 (148.3 bits), Expect = 9.5e-38, P = 9.5e-38
Identities = 94/266 (35%), Positives = 144/266 (54%)
Query: 329 AQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHI 388
A G+S +I+ ALK + EK PIQ + M GRD+IG A+TG+GKT+AF +P++ I
Sbjct: 119 ADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 178
Query: 389 LD-QPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELK 447
+ P ++++PTREL Q+ KE ++ SL +C+YGGT I +Q+ EL
Sbjct: 179 IKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLD--TICLYGGTPIGQQMRELN 236
Query: 448 RGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPD 507
G ++ V TPGR+ID++ + NL V ++VLDEAD+M +GF V I+ +
Sbjct: 237 YGIDVAVGTPGRIIDLMKRGA---LNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAK 293
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRS--VVCKEVEQHVIVXXXXXXXXXXXX 565
RQ++MFSAT P + +L ++ LN P+ I + G S + + + I
Sbjct: 294 RQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGP 353
Query: 566 XXGIYQDQGSVIVFVDKQENADSLLF 591
+ G IVF + +AD L F
Sbjct: 354 LVKEHGKGGKCIVFTQTKRDADRLAF 379
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 410 (149.4 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 92/248 (37%), Positives = 149/248 (60%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
+ V GK P I T+ + + + + + + Y K TP+Q +IP IM+GRDL+ A+TG
Sbjct: 262 VDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTG 321
Query: 374 SGKTVAFVLPLLRHILDQ----PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLR 429
SGKT AF+LP+L +++++ + P AII++PTREL QI +A+KF+ +R
Sbjct: 322 SGKTAAFLLPILSYMMNEGITASQYLQLQEPEAIIIAPTRELINQIYLDARKFSYGTCVR 381
Query: 430 VVCVYGGTGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF 489
V VYGG + ++++G I+ TPGR++D+++ ++ LR Y+VLDEADRM
Sbjct: 382 PVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVSKEKIGLSKLR---YLVLDEADRML 438
Query: 490 DMGFEPQVMRIIDN----VRPDRQTVMFSATFPRQMEALARRIL-NKPIEIQVGGRSVVC 544
DMGF P++ +++ + RQT+MFSAT+P ++ LA L ++ + + VG C
Sbjct: 439 DMGFAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVGGAC 498
Query: 545 KEVEQHVI 552
+V Q V+
Sbjct: 499 SDVAQTVL 506
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 85/227 (37%), Positives = 136/227 (59%)
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
KT+ GV+ + +A + + KPT IQ +AIP + GRD+IG+A+TGSGKT AF LP+L
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 386 RHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISE 445
+L+ P A++++PTREL QI ++ + S+G++ + GG Q
Sbjct: 84 NALLETP-----QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA 138
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVR 505
L + II+ TPGR+ID L G NLR + Y+V+DEADR+ +M FE +V +I+ +
Sbjct: 139 LAKKPHIIIATPGRLIDHLENTKG--FNLRALKYLVMDEADRILNMDFETEVDKILKVIP 196
Query: 506 PDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
DR+T +FSAT ++++ L R L P++ V + ++++Q+ I
Sbjct: 197 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 87/223 (39%), Positives = 135/223 (60%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ + G+S +L +++ +E+ TPIQA+ IP + G+D+IG A+TG+GKT AF LPLL
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+ E G I+++PTREL +Q+G+E K K +R++ +YGG I+ QI L
Sbjct: 63 KV--DTHKESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
K+ IIV TPGR++D + + R+ N+ V VLDEAD M +MGF + I+ +V
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETV---VLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
QT++FSAT P + +A R + +P I+V + V ++Q
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQ 217
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 87/223 (39%), Positives = 135/223 (60%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ + G+S +L +++ +E+ TPIQA+ IP + G+D+IG A+TG+GKT AF LPLL
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+ E G I+++PTREL +Q+G+E K K +R++ +YGG I+ QI L
Sbjct: 63 KV--DTHKESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
K+ IIV TPGR++D + + R+ N+ V VLDEAD M +MGF + I+ +V
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETV---VLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
QT++FSAT P + +A R + +P I+V + V ++Q
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQ 217
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 87/223 (39%), Positives = 135/223 (60%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ + G+S +L +++ +E+ TPIQA+ IP + G+D+IG A+TG+GKT AF LPLL
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+ E G I+++PTREL +Q+G+E K K +R++ +YGG I+ QI L
Sbjct: 63 KV--DTHKESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
K+ IIV TPGR++D + + R+ N+ V VLDEAD M +MGF + I+ +V
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETV---VLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
QT++FSAT P + +A R + +P I+V + V ++Q
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQ 217
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 87/223 (39%), Positives = 135/223 (60%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ + G+S +L +++ +E+ TPIQA+ IP + G+D+IG A+TG+GKT AF LPLL
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+ E G I+++PTREL +Q+G+E K K +R++ +YGG I+ QI L
Sbjct: 63 KV--DTHKESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
K+ IIV TPGR++D + + R+ N+ V VLDEAD M +MGF + I+ +V
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETV---VLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
QT++FSAT P + +A R + +P I+V + V ++Q
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQ 217
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 87/223 (39%), Positives = 135/223 (60%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ + G+S +L +++ +E+ TPIQA+ IP + G+D+IG A+TG+GKT AF LPLL
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+ E G I+++PTREL +Q+G+E K K +R++ +YGG I+ QI L
Sbjct: 63 KV--DTHKESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
K+ IIV TPGR++D + + R+ N+ V VLDEAD M +MGF + I+ +V
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETV---VLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
QT++FSAT P + +A R + +P I+V + V ++Q
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQ 217
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 87/223 (39%), Positives = 135/223 (60%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ + G+S +L +++ +E+ TPIQA+ IP + G+D+IG A+TG+GKT AF LPLL
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+ E G I+++PTREL +Q+G+E K K +R++ +YGG I+ QI L
Sbjct: 63 KV--DTHKESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
K+ IIV TPGR++D + + R+ N+ V VLDEAD M +MGF + I+ +V
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETV---VLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
QT++FSAT P + +A R + +P I+V + V ++Q
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQ 217
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 87/223 (39%), Positives = 135/223 (60%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ + G+S +L +++ +E+ TPIQA+ IP + G+D+IG A+TG+GKT AF LPLL
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+ E G I+++PTREL +Q+G+E K K +R++ +YGG I+ QI L
Sbjct: 63 KV--DTHKESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
K+ IIV TPGR++D + + R+ N+ V VLDEAD M +MGF + I+ +V
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETV---VLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
QT++FSAT P + +A R + +P I+V + V ++Q
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQ 217
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 82/227 (36%), Positives = 136/227 (59%)
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
K++A+ GVS+ + DA ++ + KP+ IQ A+P + G+D+IG+A+TGSGKT AF +P+L
Sbjct: 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
Query: 386 RHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISE 445
+ +LD P ++++PTREL QIG++ + +GL + GG ++ Q
Sbjct: 104 QSLLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMA 158
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVR 505
L R IIV TPGR++D L G NL+ + ++++DEADR+ +M FE ++ +I+ +
Sbjct: 159 LARRPHIIVATPGRLVDHLENTKG--FNLKALKFLIMDEADRILNMDFEVELDKILKVIP 216
Query: 506 PDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
+R+T +FSAT +++ L R L P + V R ++QH I
Sbjct: 217 RERRTYLFSATMTKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYI 263
>SGD|S000002189 [details] [associations]
symbol:DBP10 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=IGI;IPI] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002189
GO:GO:0005524 GO:GO:0005730 EMBL:BK006938 GO:GO:0003723
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:Z71781 GO:GO:0000463 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:HLKVEMN OrthoDB:EOG4JWZP1 EMBL:Z74079 PIR:S67564
RefSeq:NP_010253.2 ProteinModelPortal:Q12389 SMR:Q12389
DIP:DIP-6387N IntAct:Q12389 MINT:MINT-613064 STRING:Q12389
PaxDb:Q12389 PeptideAtlas:Q12389 EnsemblFungi:YDL031W GeneID:851530
KEGG:sce:YDL031W CYGD:YDL031w GeneTree:ENSGT00550000075100
NextBio:968920 Genevestigator:Q12389 GermOnline:YDL031W
GO:GO:0000466 Uniprot:Q12389
Length = 995
Score = 388 (141.6 bits), Expect = 1.8e-37, Sum P(2) = 1.8e-37
Identities = 77/217 (35%), Positives = 130/217 (59%)
Query: 332 GVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQ 391
G+SK +L+ +K++ + +PTPIQ + IP I+ RD++G+A+TGSGKT AF+LP++ +
Sbjct: 143 GLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKLKSH 202
Query: 392 PPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKRGAE 451
G A+I+SP+REL MQ K F + LR V + GG + EQ + +
Sbjct: 203 ---SGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPD 259
Query: 452 IIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTV 511
+I+ TPGR + + + +L+ V Y+V DEADR+F+MGF+ Q+ ++ ++ RQT+
Sbjct: 260 VIIATPGRFLHLKVEMN---LDLKSVEYVVFDEADRLFEMGFQEQLNELLASLPTTRQTL 316
Query: 512 MFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVE 548
+FSAT P + + L P+ +++ + V + +E
Sbjct: 317 LFSATLPNSLVDFVKAGLVNPVLVRLDAETKVSENLE 353
Score = 52 (23.4 bits), Expect = 1.8e-37, Sum P(2) = 1.8e-37
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 243 QDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKD 288
QD +EYSS+EE+ A +KK+ SK + + L D
Sbjct: 58 QDVIEYSSDEEEGVNNKKKAENKDIKKKKNSKKEIAAFPMLEMSDD 103
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 402 (146.6 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 81/220 (36%), Positives = 142/220 (64%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KGK P P++ W + ++ K++ + + YE+PT +Q +IP + RD++G+A+TG
Sbjct: 156 ITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETG 215
Query: 374 SGKTVAFVLPLLRHIL--DQPPLEE---TDGPMAIIMSPTRELCMQIGKEAKKFTKSLGL 428
SGKT+AF++P+L +IL D+ L+ ++ P+ +I++PTREL +QI KEA+KF K LG
Sbjct: 216 SGKTLAFLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFCKKLGY 275
Query: 429 RVVCVYGGTGISEQISELKR-GAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADR 487
+V+ + GG + I+++ + G +IV TPGR++D + ++ +L + +V+DEADR
Sbjct: 276 QVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIER---KIVDLSKCYCLVMDEADR 332
Query: 488 MFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARR 527
M DMGFE + +++D + ++Q S+T ++ L +R
Sbjct: 333 MIDMGFEKDLNKVLDKLPTEKQ---LSSTIDGRIFHLEKR 369
Score = 246 (91.7 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 56/167 (33%), Positives = 95/167 (56%)
Query: 400 PMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKR-GAEIIVCTPG 458
P+ +I++PTREL +QI KEA+KF K LG +V+ + GG + I+++ + G +IV TPG
Sbjct: 247 PVGLILAPTRELALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPG 306
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQ--------- 509
R++D + ++ +L + +V+DEADRM DMGFE + +++D + ++Q
Sbjct: 307 RLVDSIER---KIVDLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRI 363
Query: 510 -------TVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
T+MF+AT +E L ++ L P + +GG + Q
Sbjct: 364 FHLEKRSTMMFTATISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQ 410
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 402 (146.6 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 81/220 (36%), Positives = 142/220 (64%)
Query: 314 IRVKGKGCPRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 373
I KGK P P++ W + ++ K++ + + YE+PT +Q +IP + RD++G+A+TG
Sbjct: 156 ITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETG 215
Query: 374 SGKTVAFVLPLLRHIL--DQPPLEE---TDGPMAIIMSPTRELCMQIGKEAKKFTKSLGL 428
SGKT+AF++P+L +IL D+ L+ ++ P+ +I++PTREL +QI KEA+KF K LG
Sbjct: 216 SGKTLAFLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFCKKLGY 275
Query: 429 RVVCVYGGTGISEQISELKR-GAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADR 487
+V+ + GG + I+++ + G +IV TPGR++D + ++ +L + +V+DEADR
Sbjct: 276 QVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIER---KIVDLSKCYCLVMDEADR 332
Query: 488 MFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARR 527
M DMGFE + +++D + ++Q S+T ++ L +R
Sbjct: 333 MIDMGFEKDLNKVLDKLPTEKQ---LSSTIDGRIFHLEKR 369
Score = 246 (91.7 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 56/167 (33%), Positives = 95/167 (56%)
Query: 400 PMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELKR-GAEIIVCTPG 458
P+ +I++PTREL +QI KEA+KF K LG +V+ + GG + I+++ + G +IV TPG
Sbjct: 247 PVGLILAPTRELALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPG 306
Query: 459 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQ--------- 509
R++D + ++ +L + +V+DEADRM DMGFE + +++D + ++Q
Sbjct: 307 RLVDSIER---KIVDLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRI 363
Query: 510 -------TVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
T+MF+AT +E L ++ L P + +GG + Q
Sbjct: 364 FHLEKRSTMMFTATISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQ 410
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 83/227 (36%), Positives = 136/227 (59%)
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
KT+ GV+ + +A + + KPT IQ +AIP + GRD+IG+A+TGSGKT AF LP+L
Sbjct: 26 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 85
Query: 386 RHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISE 445
+L+ P A++++PTREL QI ++ + S+G++ + GG Q
Sbjct: 86 NALLETP-----QRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 140
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVR 505
L + I++ TPGR+ID L G NLR + Y+V+DEADR+ +M FE +V +I+ +
Sbjct: 141 LAKKPHIVIATPGRLIDHLENTKG--FNLRALKYLVMDEADRILNMDFETEVDKILKVIP 198
Query: 506 PDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
DR+T +FSAT ++++ L R L P++ V + ++++Q+ +
Sbjct: 199 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 245
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 83/227 (36%), Positives = 136/227 (59%)
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
KT+ GV+ + +A + + KPT IQ +AIP + GRD+IG+A+TGSGKT AF LP+L
Sbjct: 23 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 82
Query: 386 RHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISE 445
+L+ P A++++PTREL QI ++ + S+G++ + GG Q
Sbjct: 83 NALLETP-----QRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 137
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVR 505
L + I++ TPGR+ID L G NLR + Y+V+DEADR+ +M FE +V +I+ +
Sbjct: 138 LAKKPHIVIATPGRLIDHLENTKG--FNLRALKYLVMDEADRILNMDFETEVDKILKVIP 195
Query: 506 PDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
DR+T +FSAT ++++ L R L P++ V + ++++Q+ +
Sbjct: 196 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 242
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 83/227 (36%), Positives = 136/227 (59%)
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
KT+ GV+ + +A + + KPT IQ +AIP + GRD+IG+A+TGSGKT AF LP+L
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 386 RHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISE 445
+L+ P A++++PTREL QI ++ + S+G++ + GG Q
Sbjct: 84 NALLETP-----QRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 138
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVR 505
L + I++ TPGR+ID L G NLR + Y+V+DEADR+ +M FE +V +I+ +
Sbjct: 139 LAKKPHIVIATPGRLIDHLENTKG--FNLRALKYLVMDEADRILNMDFETEVDKILKVIP 196
Query: 506 PDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
DR+T +FSAT ++++ L R L P++ V + ++++Q+ +
Sbjct: 197 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 243
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 83/227 (36%), Positives = 136/227 (59%)
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
KT+ GV+ + +A + + KPT IQ +AIP + GRD+IG+A+TGSGKT AF LP+L
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 386 RHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISE 445
+L+ P A++++PTREL QI ++ + S+G++ + GG Q
Sbjct: 84 NALLETP-----QRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 138
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVR 505
L + I++ TPGR+ID L G NLR + Y+V+DEADR+ +M FE +V +I+ +
Sbjct: 139 LAKKPHIVIATPGRLIDHLENTKG--FNLRALKYLVMDEADRILNMDFETEVDKILKVIP 196
Query: 506 PDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
DR+T +FSAT ++++ L R L P++ V + ++++Q+ +
Sbjct: 197 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 243
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 83/227 (36%), Positives = 136/227 (59%)
Query: 326 KTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLL 385
KT+ GV+ + +A + + KPT IQ +AIP + GRD+IG+A+TGSGKT AF LP+L
Sbjct: 50 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 109
Query: 386 RHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISE 445
+L+ P A++++PTREL QI ++ + S+G++ + GG Q
Sbjct: 110 NALLETP-----QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA 164
Query: 446 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVR 505
L + I++ TPGR+ID L G NLR + Y+V+DEADR+ +M FE +V +I+ +
Sbjct: 165 LAKKPHIVIATPGRLIDHLENTKG--FNLRALKYLVMDEADRILNMDFETEVDKILKVIP 222
Query: 506 PDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVI 552
DR+T +FSAT ++++ L R L P++ V + ++++Q+ +
Sbjct: 223 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 269
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 87/274 (31%), Positives = 163/274 (59%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+A+ G++ + AL + + PT +Q AIPAI++GRDL+ +++TGSGKT AF LPLL+
Sbjct: 18 TFAELGLNAALRKALPTR-LKHPTRVQQLAIPAILAGRDLLALSQTGSGKTFAFGLPLLQ 76
Query: 387 HILDQPPLEETDG------PMAIIMSPTRELCMQIGKE----AKKFTKSLGLRVVCVYGG 436
+ Q ++ T P+A+++ PTREL +Q+ + A + + S L + + GG
Sbjct: 77 ILWQQIAVQTTAKSVPAAKPLALVLVPTRELALQVSEALHALASQLSTSAPLNIQLLCGG 136
Query: 437 TGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQ 496
+ +Q+++L +++V TPGR++D+ + +L + ++VLDEADR+ +MGF P
Sbjct: 137 VALEQQLADLSAKPQLVVATPGRLLDLCTQSH---ISLDAIKHLVLDEADRLLEMGFWPD 193
Query: 497 VMRIIDNVRPDRQTVMFSATFPRQMEALARRIL-NKPIEIQVGGRSVVCKEVEQHVIVXX 555
+ +++ + +QT++FSAT P +++LA ++L N P++++ R+ V E+E+ + +
Sbjct: 194 MQKLMAMMPKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIEEQLYLVN 253
Query: 556 XXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
YQ V+VF+ +++AD++
Sbjct: 254 KGSKAQALIALLKQYQ-WPQVLVFISARDDADAI 286
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 90/270 (33%), Positives = 151/270 (55%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ + G+ +L L + Y +PTPIQA+AIP++ +GRDLI A TGSGKT F LP+L+
Sbjct: 9 TFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQ 68
Query: 387 HILDQ--PPLEETDGPMA--IIMSPTRELCMQIGKEAKKFTKSLG--LRVVCVYGGTGIS 440
+ + + + G +++ PTREL Q+ K + ++ + V+GG ++
Sbjct: 69 KLREDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSVN 128
Query: 441 EQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRI 500
Q+ L+ G +I+V TPGR++D++++N+ L +V +VLDEADRM +GF ++ +
Sbjct: 129 IQMLALRGGVDILVATPGRLLDLISSNA---IKLDKVKTLVLDEADRMLSLGFTEELTAL 185
Query: 501 IDNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVXXXXXXX 560
+ +QT++FSATFP Q+ L + +LN PIEIQ+ +S + Q V
Sbjct: 186 LALTPKKKQTLLFSATFPEQVTTLTQELLNNPIEIQL--QSADASTLVQRVFTVNKGEKT 243
Query: 561 XXXXXXXGIYQDQG-SVIVFVDKQENADSL 589
I Q+Q ++FV+ + + + L
Sbjct: 244 AVLAHL--IQQEQWRQALIFVNAKHHCEHL 271
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 87/274 (31%), Positives = 163/274 (59%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+A+ G++ + AL + + PT +Q AIPAI++GRDL+ +++TGSGKT AF LPLL+
Sbjct: 18 TFAELGLNAALRKALPTR-LKHPTRVQQLAIPAILAGRDLLALSQTGSGKTFAFGLPLLQ 76
Query: 387 HILDQPPLEETDG------PMAIIMSPTRELCMQIGKE----AKKFTKSLGLRVVCVYGG 436
+ Q ++ T P+A+++ PTREL +Q+ + A + + S L + + GG
Sbjct: 77 ILWQQIAVQTTAKSVPAAKPLALVLVPTRELALQVSEALHALASQLSTSAPLNIQLLCGG 136
Query: 437 TGISEQISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQ 496
+ +Q+++L +++V TPGR++D+ + +L + ++VLDEADR+ +MGF P
Sbjct: 137 VALEQQLADLSAKPQLVVATPGRLLDLCTQSH---ISLDAIKHLVLDEADRLLEMGFWPD 193
Query: 497 VMRIIDNVRPDRQTVMFSATFPRQMEALARRIL-NKPIEIQVGGRSVVCKEVEQHVIVXX 555
+ +++ + +QT++FSAT P +++LA ++L N P++++ R+ V E+E+ + +
Sbjct: 194 MQKLMAMMPKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIEEQLYLVN 253
Query: 556 XXXXXXXXXXXXGIYQDQGSVIVFVDKQENADSL 589
YQ V+VF+ +++AD++
Sbjct: 254 KGSKAQALIALLKQYQ-WPQVLVFISARDDADAI 286
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 402 (146.6 bits), Expect = 4.0e-37, P = 4.0e-37
Identities = 89/266 (33%), Positives = 147/266 (55%)
Query: 329 AQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHI 388
++ G+S +I+ AL + EK PIQ + M GRD+IG A+TG+GKT+AF +P++ I
Sbjct: 107 SELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 166
Query: 389 LDQPPLEETD-GPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELK 447
+ P+ ++++PTREL Q+ KE ++ SL +C+YGGT I +Q+ +L
Sbjct: 167 IKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLD--TICLYGGTPIGQQMRQLD 224
Query: 448 RGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPD 507
G ++ V TPGR+ID++ + NL V ++VLDEAD+M +GF V I++ +
Sbjct: 225 YGVDVAVGTPGRVIDLMKRGA---LNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEK 281
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRS--VVCKEVEQHVIVXXXXXXXXXXXX 565
RQ++MFSAT P + +L ++ LN P+ + + G S + + + I+
Sbjct: 282 RQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGP 341
Query: 566 XXGIYQDQGSVIVFVDKQENADSLLF 591
+ G IVF + +AD L +
Sbjct: 342 LVTEHAKGGKCIVFTQTKRDADRLSY 367
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 372 (136.0 bits), Expect = 4.7e-37, Sum P(2) = 4.7e-37
Identities = 80/228 (35%), Positives = 129/228 (56%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ GV +I+DA K + KP IQ ++IP + GRD+IG+A+TGSGKT AFV+P+L+
Sbjct: 120 TFESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQ 179
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
+L+ P G + ++PTREL QI + ++G++ + GG Q L
Sbjct: 180 KLLEAP-----QGLFCLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGGIDSMSQSLAL 234
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
+ ++V +PGR++ L G NLR + Y ++DEADR+F FE +V I+ +
Sbjct: 235 AKKPHVVVGSPGRVLHHLEHTKG--FNLRSIKYFIMDEADRLFSADFEEEVNNILKVIPK 292
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGR-SVVCKEVEQHVIV 553
+R T +FSAT ++ L R L P+++QV + V ++Q++ V
Sbjct: 293 ERNTYLFSATMTSKVAKLQRASLVNPVKVQVASKYQTVDTLLQQYLFV 340
Score = 44 (20.5 bits), Expect = 4.7e-37, Sum P(2) = 4.7e-37
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 232 EKAKGELMEE--NQDGLEYSSEEEQEDLTSTAANLASKQ-KKELSKVDHSTIEYL 283
++ K E+ E ++D L EEE++++ N K+ ++E K ++ T E L
Sbjct: 71 KEIKKEIKNEELDEDSL-LEKEEEEKEIEEFINNTNQKKSEEEEKKYENVTFESL 124
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 82/219 (37%), Positives = 132/219 (60%)
Query: 322 PRPIKTWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFV 381
P P K++ + G+ ++ +A + Y+ PTPIQ+QAIP + GRD+IG+A+TGSGKT AF
Sbjct: 42 PAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFA 101
Query: 382 LPLLRHILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISE 441
LP+L+ +++ P +T ++++PTREL QI + + ++G+R + GG +
Sbjct: 102 LPMLQALMEAP---QT--LFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVA 156
Query: 442 QISELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRII 501
Q L + IIV TPGR++D L G +LR + Y+ +DEADR+ DM F + +II
Sbjct: 157 QSIALGKKPHIIVATPGRLLDHLENTKG--FSLRNLKYLAIDEADRLLDMDFGESLDKII 214
Query: 502 DNVRPDRQTVMFSATFPRQMEALARRILNKPIEIQVGGR 540
+ R T +FSAT ++E+L R L+ P+ + V +
Sbjct: 215 RILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSSK 253
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 85/223 (38%), Positives = 133/223 (59%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ +S + A+K+ +E+ TPIQAQ IP ++ +D+IG A+TG+GKT AF +PL+
Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
I P E+ AI+++PTREL +Q+ +E K + RV+ +YGG I QI L
Sbjct: 64 KI--NP---ESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRAL 118
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
K+ IIV TPGR++D + + R L+ V +VLDEAD M +MGF + I+ NV
Sbjct: 119 KKNPHIIVGTPGRLLDHI---NRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPA 175
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
+ QT++FSAT P ++ +A R + P ++V + + ++Q
Sbjct: 176 EHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQ 218
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 83/226 (36%), Positives = 135/226 (59%)
Query: 328 WAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRH 387
+++ ++ K+L A+++ YE PTPIQA AIP + GRD++GIA+TG+GKT +F LP++
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMIT- 62
Query: 388 ILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISELK 447
+L + P ++++ PTREL Q+ + +TK L L + GG EQ + +
Sbjct: 63 LLARGRARARM-PRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALID 121
Query: 448 RGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPD 507
RG ++++ TPGR++D G++ L V +V+DEADRM DMGF P + RI
Sbjct: 122 RGVDVLIATPGRLLDHF--ERGKLL-LTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFT 178
Query: 508 RQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIV 553
RQT+ FSAT ++E + L+ P I+V ++ + +EQ V++
Sbjct: 179 RQTLFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVL 224
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 83/223 (37%), Positives = 133/223 (59%)
Query: 327 TWAQCGVSKKILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLR 386
T+ +S ++ A+ + +E+ TPIQAQ IP +S +D+IG A+TG+GKT AF +PL+
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 387 HILDQPPLEETDGPMAIIMSPTRELCMQIGKEAKKFTKSLGLRVVCVYGGTGISEQISEL 446
I P E+ AI+++PTREL +Q+ +E K + +V+ +YGG I QI L
Sbjct: 64 KI--NP---ESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRAL 118
Query: 447 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRP 506
K+ IIV TPGR++D + + R L V +V+DEAD M +MGF + I+ NV
Sbjct: 119 KKNPNIIVGTPGRLLDHI---NRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPS 175
Query: 507 DRQTVMFSATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQ 549
+ QT++FSAT P ++ +A R + +P ++V + + ++Q
Sbjct: 176 EHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQ 218
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 88/216 (40%), Positives = 134/216 (62%)
Query: 336 KILDALKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFVLPLLRHILDQPPLE 395
++L+ L Y + TPIQAQ++PAI++G D+IG KTGSGKT AF L LL LD
Sbjct: 11 ELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK-LDVKRFR 69
Query: 396 ETDGPMAIIMSPTRELCMQIGKEAKKFTKSL-GLRVVCVYGGTGISEQISELKRGAEIIV 454
+++ PTREL Q+ +E + + + ++V+ + GG + QI L+ GA IIV
Sbjct: 70 I----QTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIV 125
Query: 455 CTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFS 514
TPGR++D L N ++NL +VLDEADRM +MGF+PQ+ II+ +RQT++FS
Sbjct: 126 GTPGRIVDHLDRNRLDLSNLNM---LVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFS 182
Query: 515 ATFPRQMEALARRILNKPIEIQVGGRSVVCKEVEQH 550
ATFP Q++++A++I+ P+ ++ +EQH
Sbjct: 183 ATFPEQIQSIAKQIMYNPVMVKAAVTHEK-NTIEQH 217
WARNING: HSPs involving 626 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 615 446 0.00091 118 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 876
No. of states in DFA: 612 (65 KB)
Total size of DFA: 251 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 38.31u 0.09s 38.40t Elapsed: 00:00:08
Total cpu time: 38.38u 0.09s 38.47t Elapsed: 00:00:12
Start: Thu Aug 15 14:42:19 2013 End: Thu Aug 15 14:42:31 2013
WARNINGS ISSUED: 2