BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12411
(161 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383854537|ref|XP_003702777.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Megachile rotundata]
Length = 1035
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 128/179 (71%), Gaps = 21/179 (11%)
Query: 1 MKKWNLEDDSDED----ENDNKD--ENGKTA-------------EEDIDPLDAFMQGVHE 41
MKKW+LEDDSDE+ +N NK+ E+G+T EE++DPLDAFM V E
Sbjct: 178 MKKWSLEDDSDEETPVVQNSNKEVKEDGETKEEVEEVKEETKGDEEEVDPLDAFMAEVQE 237
Query: 42 EMRKVNK--PAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSS 99
E+RKVNK +A+ G++ GVVIVTGV K V+K KGEL+E+NQDGLEYSS
Sbjct: 238 EVRKVNKLDSKSGKSANNGTGTGGTQSGGVVIVTGVAKNKVQKQKGELIEQNQDGLEYSS 297
Query: 100 EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
EEE E+L TAA +A+KQK+EL+KVDH+T EY PFRK FYVEVPEIARMTPEEVE YKE
Sbjct: 298 EEEGENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEAYKE 356
>gi|307202910|gb|EFN82130.1| Probable ATP-dependent RNA helicase DDX46 [Harpegnathos saltator]
Length = 1034
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 126/178 (70%), Gaps = 21/178 (11%)
Query: 1 MKKWNLEDDSDED----ENDNKD--------------ENGKTAEEDIDPLDAFMQGVHEE 42
MKKW+LEDDSDE+ +N+ K+ E K EE++DPLDAFM V EE
Sbjct: 179 MKKWSLEDDSDEETPVVQNNTKEAKEEGVKEEVEEVKEEVKDEEEEVDPLDAFMAEVQEE 238
Query: 43 MRKVNKP--AVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSE 100
+RKVNK P A+ S ++ GVVIVTGV KK ++K KGEL+E+NQDGLEYSSE
Sbjct: 239 VRKVNKLDNKAPKNAN-NGTSSATQSGGVVIVTGVAKKKIQKQKGELIEQNQDGLEYSSE 297
Query: 101 EEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
EE E+L TAA +A+KQK+EL+KVDH+T +Y PFRK FYVEVPEIARMTPEEVE YKE
Sbjct: 298 EEGENLHETAAGIANKQKRELAKVDHATTDYQPFRKSFYVEVPEIARMTPEEVEIYKE 355
>gi|340724160|ref|XP_003400452.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46-like [Bombus terrestris]
Length = 1030
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 125/179 (69%), Gaps = 21/179 (11%)
Query: 1 MKKWNLEDDSDED----ENDNKD---------------ENGKTAEEDIDPLDAFMQGVHE 41
MKKW+LEDDSDE+ +N NK+ E K EE++DPLDAFM V E
Sbjct: 173 MKKWSLEDDSDEETPVVQNSNKECKEDGETKEQAEQVKEEAKCDEEEVDPLDAFMAEVQE 232
Query: 42 EMRKVNK--PAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSS 99
E+RKVNK A+ +G++ GVVIVTGV KK V+K KGEL+E+NQDGLEYSS
Sbjct: 233 EVRKVNKLDSKGGKNANNGTGTAGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSS 292
Query: 100 EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
EEE E+L TAA +A+KQK+EL+KVDH+T EY PFRK FYVEVPEIARMT EEV+ YKE
Sbjct: 293 EEEGENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTSEEVDAYKE 351
>gi|345482984|ref|XP_001603634.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Nasonia
vitripennis]
Length = 1039
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 122/183 (66%), Gaps = 32/183 (17%)
Query: 2 KKWNLEDDSDED--------------------ENDNKDENGKTAEEDIDPLDAFMQGVHE 41
KKW+LEDDSDE+ + K E K EE+IDPLDAFM VH+
Sbjct: 181 KKWSLEDDSDEEMPIVVNKETKEEEEEEAKEENVEEKVETKKEDEEEIDPLDAFMAEVHQ 240
Query: 42 EMRKVNKPAVPTTADVKPADSGS------KPAGVVIVTGVVKKSVEKAKGELMEENQDGL 95
E+RKVNK D KP +G+ + GV+IVTGV KK V+K KGEL+E+NQDGL
Sbjct: 241 EVRKVNK------VDNKPLKTGTNCTGTGQTGGVMIVTGVAKKKVQKHKGELIEQNQDGL 294
Query: 96 EYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK 155
EYSSEEE E+L TAA +A+KQK+EL+KVDH+ +Y+PF K FY EVPEIARMTPEEVE
Sbjct: 295 EYSSEEEGENLHETAAGIANKQKRELAKVDHNATDYIPFTKAFYREVPEIARMTPEEVEL 354
Query: 156 YKE 158
YKE
Sbjct: 355 YKE 357
>gi|193683325|ref|XP_001948746.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Acyrthosiphon pisum]
Length = 985
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 119/177 (67%), Gaps = 31/177 (17%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNK------------- 48
KKWNLEDDSDE+E + EE+IDPLDAFMQGV EE+RKVNK
Sbjct: 131 KKWNLEDDSDEEEEAKNNAEKLIEEEEIDPLDAFMQGVQEEVRKVNKVDGHRSNLSEKNS 190
Query: 49 -------PAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEE 101
P V TT+ +GVVIV+GV KK +GEL+E+NQD LEYSSEE
Sbjct: 191 LNDLNQSPGVDTTS-----------SGVVIVSGVAKKKDNNTRGELIEQNQDALEYSSEE 239
Query: 102 EQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
EQEDL AA+LA+KQKKEL K+DH+ I YLPFRK+FYVEVPEI+RMT EE+EKYKE
Sbjct: 240 EQEDLNVAAASLANKQKKELPKIDHAEISYLPFRKNFYVEVPEISRMTSEEIEKYKE 296
>gi|312371167|gb|EFR19420.1| hypothetical protein AND_22552 [Anopheles darlingi]
Length = 1161
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 108/144 (75%), Gaps = 4/144 (2%)
Query: 16 DNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPT-TADVKPADSGSKPAGVVIVTG 74
D EN EE+IDPLDA+M+ V+EE+RKVNK A P +D K S GV I+TG
Sbjct: 331 DKTGENAVPEEEEIDPLDAYMRDVNEEVRKVNKLANPMPKSDGK---SSGTTGGVTIITG 387
Query: 75 VVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPF 134
V K+ E KGEL+E+NQDGLEYSSEEEQED+ TAANLA+KQKKEL+K+DHS I YLPF
Sbjct: 388 VAKQKTEAKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANKQKKELAKIDHSGINYLPF 447
Query: 135 RKDFYVEVPEIARMTPEEVEKYKE 158
RK FYVEVPEIARMT EV+ YK+
Sbjct: 448 RKLFYVEVPEIARMTQTEVDAYKK 471
>gi|157138330|ref|XP_001657248.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869525|gb|EAT33750.1| AAEL013985-PA [Aedes aegypti]
Length = 1029
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 125/158 (79%), Gaps = 5/158 (3%)
Query: 2 KKWNLEDDSDEDENDNKDE-NGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
KKW+LEDD ++DE+D KD+ N E+D+DPLDAFM+ V+EE+RKVNK +P++A +
Sbjct: 196 KKWSLEDDEEDDEDDIKDKANNNDEEDDVDPLDAFMKEVNEEVRKVNK--LPSSAPKQDG 253
Query: 61 DSGSKPAGVVIVTGVVKKSVEKAK-GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK 119
+ S +GV I+TGV KK+ E K GEL+E+NQDGLEYSSEEEQED+ TAANLA+KQKK
Sbjct: 254 KAASN-SGVTIITGVAKKNTETTKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANKQKK 312
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
EL+K+DHS I Y+PFRK FYVEVPEIA+MT EV YK
Sbjct: 313 ELAKIDHSGINYMPFRKAFYVEVPEIAKMTHAEVGVYK 350
>gi|170039965|ref|XP_001847786.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863566|gb|EDS26949.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 942
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/161 (62%), Positives = 124/161 (77%), Gaps = 10/161 (6%)
Query: 2 KKWNLEDDSDEDENDNKDENGKT-AEEDIDPLDAFMQGVHEEMRKVNK---PAVPTTADV 57
KKW+LEDD ++D++D + + E+D+DPLDAFM+ V+EE+RKVNK PA P A+
Sbjct: 108 KKWSLEDDEEDDDDDGEGKGSANDGEDDVDPLDAFMKEVNEEVRKVNKITGPA-PKAAEG 166
Query: 58 KPADSGSKPAGVVIVTGVVKKSVEKAK-GELMEENQDGLEYSSEEEQEDLTSTAANLASK 116
K A S +GV I+TGV KK+ E K GEL+E+NQDGLEYSSEEEQED+ TAANLA+K
Sbjct: 167 KAATS----SGVTIITGVAKKNTETVKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANK 222
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
QKKEL+K+DHS I YLPFRK FYVEVPEIA+MT EV+ YK
Sbjct: 223 QKKELAKIDHSGINYLPFRKVFYVEVPEIAKMTQTEVDAYK 263
>gi|350408906|ref|XP_003488552.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Bombus
impatiens]
Length = 1030
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 124/179 (69%), Gaps = 21/179 (11%)
Query: 1 MKKWNLEDDSDED----ENDNKD---------------ENGKTAEEDIDPLDAFMQGVHE 41
MKKW+LEDDSDE+ +N NK+ E K EE++DPLDAFM V E
Sbjct: 173 MKKWSLEDDSDEETPVVQNSNKECKEDGETKEQVEQVKEEAKCDEEEVDPLDAFMAEVQE 232
Query: 42 EMRKVNK--PAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSS 99
E+RKVNK A+ G++ GVVIVTGV KK V+K KGEL+E+NQDGLEYSS
Sbjct: 233 EVRKVNKLDSKGGKNANNGTGTGGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSS 292
Query: 100 EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
EEE E+L TAA +A+KQK+EL+KVDH+T EY PFRK FYVEVPEIARMT EEVE YKE
Sbjct: 293 EEEGENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTSEEVEAYKE 351
>gi|158289704|ref|XP_311375.4| AGAP010656-PA [Anopheles gambiae str. PEST]
gi|157018455|gb|EAA07045.4| AGAP010656-PA [Anopheles gambiae str. PEST]
Length = 968
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 121/160 (75%), Gaps = 7/160 (4%)
Query: 2 KKWNLEDDSDEDEND---NKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVK 58
KKW+LEDD ++DE + +K + EE+IDPLDAFM+ V+EE+RKVNK + P +
Sbjct: 201 KKWSLEDDEEDDETEDAKDKADGAAEEEEEIDPLDAFMKEVNEEVRKVNKLSNP----LP 256
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
D + +GV I+TGV K+ E KGEL+E+NQDGLEYSSEEEQED+ TAANLA+KQK
Sbjct: 257 KTDGKASSSGVTIITGVAKQKQETKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANKQK 316
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
KEL+K+DHS I Y+PFRK FYVEVPEIARMT E++ YK+
Sbjct: 317 KELAKIDHSGINYMPFRKSFYVEVPEIARMTQTEIDAYKK 356
>gi|189240548|ref|XP_973126.2| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 984
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 123/160 (76%), Gaps = 9/160 (5%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEED-IDPLDAFMQGVHEEMRKVNKPAVPTTADVKP- 59
KKW+LE+DS++++ D +++ + EE+ +DPLD +M+GV EE+RK +K D+K
Sbjct: 155 KKWSLENDSEDEDKDKEEKKEEEEEEEEVDPLDEYMKGVQEEVRKTHK------LDMKKP 208
Query: 60 -ADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+SG+K +VIVTGV K V K KGEL+E+NQDGLEYSSEEE EDL TAA++ +KQK
Sbjct: 209 KTESGNKKGALVIVTGVAKSKVNKNKGELIEQNQDGLEYSSEEEIEDLKDTAASIVNKQK 268
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
KEL+K+DH+ + YLPFRK+FYVEVPEIA+MT EEVE YKE
Sbjct: 269 KELAKIDHNMVRYLPFRKNFYVEVPEIAKMTHEEVEAYKE 308
>gi|307189252|gb|EFN73695.1| Probable ATP-dependent RNA helicase DDX46 [Camponotus floridanus]
Length = 1028
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 121/177 (68%), Gaps = 22/177 (12%)
Query: 1 MKKWNLEDDSDED----ENDNKDENGKTAEED-------------IDPLDAFMQGVHEEM 43
MKKW+LEDDSDE+ +N+ + + EE IDPLDAFM V EE+
Sbjct: 176 MKKWSLEDDSDEETPVVQNNKEAKEEGAKEEIEEVKEEVKDEEEEIDPLDAFMAEVQEEV 235
Query: 44 RKVNK--PAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEE 101
RKVNK P A+ + S VVIVTGV KK V+K KGEL+E+NQDGLEYSSEE
Sbjct: 236 RKVNKFDSKAPKNAN---NGTNSNAQSVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEE 292
Query: 102 EQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
E E+L TAA +A+KQK+EL+KVDH+T EY PFRK FYVEVPEIARMTPEEVE YKE
Sbjct: 293 EGENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEMYKE 349
>gi|270011364|gb|EFA07812.1| hypothetical protein TcasGA2_TC005373 [Tribolium castaneum]
Length = 1007
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 124/187 (66%), Gaps = 37/187 (19%)
Query: 2 KKWNLEDDSDEDENDNKDE----------NGKT------------------AEEDIDPLD 33
KKW+LE+DS EDE+ +K E NG+ EE++DPLD
Sbjct: 152 KKWSLENDS-EDEDKDKGETKEDQVEEETNGEAPPQEEKQEAKEEKKEEEEEEEEVDPLD 210
Query: 34 AFMQGVHEEMRKVNKPAVPTTADVKP--ADSGSKPAGVVIVTGVVKKSVEKAKGELMEEN 91
+M+GV EE+RK +K D+K +SG+K +VIVTGV K V K KGEL+E+N
Sbjct: 211 EYMKGVQEEVRKTHK------LDMKKPKTESGNKKGALVIVTGVAKSKVNKNKGELIEQN 264
Query: 92 QDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPE 151
QDGLEYSSEEE EDL TAA++ +KQKKEL+K+DH+ + YLPFRK+FYVEVPEIA+MT E
Sbjct: 265 QDGLEYSSEEEIEDLKDTAASIVNKQKKELAKIDHNMVRYLPFRKNFYVEVPEIAKMTHE 324
Query: 152 EVEKYKE 158
EVE YKE
Sbjct: 325 EVEAYKE 331
>gi|328786029|ref|XP_001122722.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Apis
mellifera]
Length = 1030
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 127/179 (70%), Gaps = 21/179 (11%)
Query: 1 MKKWNLEDDSDED----ENDNKD--ENGKTAEED-------------IDPLDAFMQGVHE 41
MKKW+LEDDSDE+ +N NK+ E+G+T EE +DPLDAFM V E
Sbjct: 173 MKKWSLEDDSDEETPVVQNSNKEVKEDGETKEEVEEVKEEAKDDEEEVDPLDAFMAEVQE 232
Query: 42 EMRKVNKP--AVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSS 99
E+RKVNK A+ G++ GVVIVTGV KK V+K KGEL+E+NQDGLEYSS
Sbjct: 233 EVRKVNKLDNKGGKNANNGTGTGGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSS 292
Query: 100 EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
EEE E+L TAA +A+KQK+EL+KVDH+T EY PFRK FYVEVPEIARMTPEEVE YKE
Sbjct: 293 EEEGENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEAYKE 351
>gi|380022024|ref|XP_003694855.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Apis
florea]
Length = 713
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 127/179 (70%), Gaps = 21/179 (11%)
Query: 1 MKKWNLEDDSDED----ENDNKD--ENGKTAEED-------------IDPLDAFMQGVHE 41
MKKW+LEDDSDE+ +N NK+ E+G+T EE +DPLDAFM V E
Sbjct: 173 MKKWSLEDDSDEETPVVQNSNKEVKEDGETKEEVEEVKEEAKDDEEEVDPLDAFMAEVQE 232
Query: 42 EMRKVNKP--AVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSS 99
E+RKVNK A+ G++ GVVIVTGV KK V+K KGEL+E+NQDGLEYSS
Sbjct: 233 EVRKVNKLDNKGGKNANNGTGTGGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSS 292
Query: 100 EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
EEE E+L TAA +A+KQK+EL+KVDH+T EY PFRK FYVEVPEIARMTPEEVE YKE
Sbjct: 293 EEEGENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEAYKE 351
>gi|49072840|gb|AAT51707.1| DEAD box RNA helicase [Choristoneura fumiferana]
Length = 1012
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 104/133 (78%), Gaps = 6/133 (4%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSV--EKAK 84
++IDPLDA+MQ V +E+RKVN+ V P + G+ G+VI+TG KK V +K K
Sbjct: 205 DEIDPLDAYMQEVQQEVRKVNQMDQQRGLTV-PTNGGT---GIVILTGTAKKKVSEQKNK 260
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GEL+E+NQDGLEYSSEEE ED+ TAANLASKQ+KEL+KVDHS++EY+PFRK FY EV E
Sbjct: 261 GELIEQNQDGLEYSSEEENEDIKDTAANLASKQRKELAKVDHSSLEYMPFRKAFYTEVSE 320
Query: 145 IARMTPEEVEKYK 157
+ARM+PEEVE Y+
Sbjct: 321 LARMSPEEVEAYR 333
>gi|357615888|gb|EHJ69887.1| DEAD box RNA helicase [Danaus plexippus]
Length = 992
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 112/164 (68%), Gaps = 23/164 (14%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKP------AVPTTA 55
KKW+LEDDS + + DE + PLDA+MQ V +E+RKVN+ +VPTT
Sbjct: 168 KKWSLEDDSGDVVEEKIDEEDEID-----PLDAYMQEVQQEVRKVNQLDQARGISVPTTG 222
Query: 56 DVKPADSGSKPAGVVIVTGVVKKSV--EKAKGELMEENQDGLEYSSEEEQEDLTSTAANL 113
GVVI+TG KK V +K KGEL+E+NQDGLEYSSEEE ED+ AANL
Sbjct: 223 GT----------GVVILTGTAKKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANL 272
Query: 114 ASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
ASKQ+KEL+KVDH++++Y+ FRK FY EV E+ARMTPEEVE Y+
Sbjct: 273 ASKQRKELAKVDHASLDYMSFRKAFYTEVSELARMTPEEVEAYR 316
>gi|242009038|ref|XP_002425300.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212509065|gb|EEB12562.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 1014
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 125/157 (79%), Gaps = 4/157 (2%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPAD 61
KKWNLEDDSDE+E D K E G+ +E++DPLDAFMQ V EE+R VNK + K +
Sbjct: 179 KKWNLEDDSDEEEEDKK-EAGENNDEELDPLDAFMQTVEEEVRHVNKLEIKKPG--KQGE 235
Query: 62 SGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKEL 121
G+ P G+VI+TGV KK VEK KGEL+E+NQDGLEYSSEEE EDL TA +A++QKK+L
Sbjct: 236 QGNAP-GLVILTGVAKKKVEKKKGELIEQNQDGLEYSSEEEMEDLKLTADGIANRQKKDL 294
Query: 122 SKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+KVDHSTI YLPFRK+FY+EVPEIA+MT EEVEKY+E
Sbjct: 295 AKVDHSTINYLPFRKNFYIEVPEIAKMTNEEVEKYRE 331
>gi|198470027|ref|XP_001355197.2| GA19457 [Drosophila pseudoobscura pseudoobscura]
gi|198147147|gb|EAL32254.2| GA19457 [Drosophila pseudoobscura pseudoobscura]
Length = 1243
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 96/130 (73%), Gaps = 11/130 (8%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK-SVEKAKGEL 87
IDPLDA+MQ V++EMR+VN P S+ GVVI+TGV KK S E KGEL
Sbjct: 400 IDPLDAYMQEVNKEMRRVNNFVEPP----------SQTQGVVILTGVAKKKSTESKKGEL 449
Query: 88 MEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIAR 147
+E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE++R
Sbjct: 450 IEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVSYAPFRKNFYVEVPELSR 509
Query: 148 MTPEEVEKYK 157
MTP +VEKY+
Sbjct: 510 MTPSDVEKYR 519
>gi|332031410|gb|EGI70923.1| Putative ATP-dependent RNA helicase DDX46 [Acromyrmex echinatior]
Length = 1013
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 1 MKKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNK--PAVPTTADVK 58
MKKW+LEDDSDE+ ++ E + ++ + V EE+RKVNK P A+
Sbjct: 176 MKKWSLEDDSDEETPVVQNNKETKEEGAKEEIEEVNEEVQEEVRKVNKFDGKAPKNAN-N 234
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+S S+ GVVIVTGV KK V+K KGEL+E+NQDGLEYSSEEE E+L TAA +A+KQK
Sbjct: 235 GTNSASQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLHETAAGIANKQK 294
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+EL+KVDH+T EY PFRK FYVEVPEIARMTPEEVE YKE
Sbjct: 295 RELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEVYKE 334
>gi|195397525|ref|XP_002057379.1| GJ17053 [Drosophila virilis]
gi|194147146|gb|EDW62865.1| GJ17053 [Drosophila virilis]
Length = 1244
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 94/132 (71%), Gaps = 12/132 (9%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK-G 85
+D+DPLDA+MQ V+ EMR+VN P +K GVVI+TGV KK K G
Sbjct: 399 DDVDPLDAYMQEVNREMRRVNHFVSP-----------AKAQGVVILTGVAKKKTNTVKKG 447
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
EL+E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE+
Sbjct: 448 ELIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVSYAPFRKNFYVEVPEL 507
Query: 146 ARMTPEEVEKYK 157
ARMT EV+KY+
Sbjct: 508 ARMTNSEVDKYR 519
>gi|195163860|ref|XP_002022767.1| GL14575 [Drosophila persimilis]
gi|194104790|gb|EDW26833.1| GL14575 [Drosophila persimilis]
Length = 1243
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 95/130 (73%), Gaps = 11/130 (8%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK-SVEKAKGEL 87
IDPLDA+MQ V++EMR+VN P S+ GVVI+TGV KK S E KGEL
Sbjct: 400 IDPLDAYMQEVNKEMRRVNNFVEPP----------SQTQGVVILTGVAKKKSTESKKGEL 449
Query: 88 MEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIAR 147
+E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE++R
Sbjct: 450 IEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVSYAPFRKNFYVEVPELSR 509
Query: 148 MTPEEVEKYK 157
MT +VEKY+
Sbjct: 510 MTQSDVEKYR 519
>gi|194894625|ref|XP_001978097.1| GG17877 [Drosophila erecta]
gi|190649746|gb|EDV47024.1| GG17877 [Drosophila erecta]
Length = 1222
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 101/145 (69%), Gaps = 11/145 (7%)
Query: 14 ENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVT 73
E+++K + E+DIDPLDA+MQ V+ EMR+VN P T K GVVI+T
Sbjct: 357 ESEHKSQPKDEPEDDIDPLDAYMQEVNNEMRRVNNFVNPPT----------KAQGVVILT 406
Query: 74 GVVKKSVEKAK-GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYL 132
GV KK K GEL+E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y
Sbjct: 407 GVAKKKTTTLKKGELIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYA 466
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYK 157
PFRK+FYVEVPE++RMT +VEKY+
Sbjct: 467 PFRKNFYVEVPELSRMTAGDVEKYR 491
>gi|195130219|ref|XP_002009550.1| GI15175 [Drosophila mojavensis]
gi|193908000|gb|EDW06867.1| GI15175 [Drosophila mojavensis]
Length = 1229
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 95/134 (70%), Gaps = 12/134 (8%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
+E+D+DPLDA+MQ V+ EMR+VN P +K GVVI+TGV KK K
Sbjct: 393 SEDDVDPLDAYMQEVNREMRRVNHFVSP-----------AKAQGVVILTGVAKKKTVAVK 441
Query: 85 -GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
GEL+E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS + Y PFRK+FYVEVP
Sbjct: 442 KGELIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSCVSYAPFRKNFYVEVP 501
Query: 144 EIARMTPEEVEKYK 157
E+ARMT EVEKY+
Sbjct: 502 ELARMTSSEVEKYR 515
>gi|195478796|ref|XP_002100656.1| GE17181 [Drosophila yakuba]
gi|194188180|gb|EDX01764.1| GE17181 [Drosophila yakuba]
Length = 1215
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK- 84
E+DIDPLDA+MQ V+ EMR+VN P T K GVVI+TGV KK K
Sbjct: 362 EDDIDPLDAYMQEVNNEMRRVNNFVNPPT----------KAQGVVILTGVAKKKATTLKK 411
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GEL+E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 412 GELIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPE 471
Query: 145 IARMTPEEVEKYK 157
++RMT +VEKY+
Sbjct: 472 LSRMTAGDVEKYR 484
>gi|195432312|ref|XP_002064167.1| GK20023 [Drosophila willistoni]
gi|194160252|gb|EDW75153.1| GK20023 [Drosophila willistoni]
Length = 1234
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 99/133 (74%), Gaps = 9/133 (6%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK-- 84
+DIDPLDA+MQ V+ EMR+VN V+PA S + GV+I+TGV KK ++AK
Sbjct: 386 DDIDPLDAYMQEVNNEMRRVNN-------FVQPASSTTGGQGVMILTGVAKKKTQQAKAK 438
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GEL+E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 439 GELIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVSYAPFRKNFYVEVPE 498
Query: 145 IARMTPEEVEKYK 157
++RM EV+KY+
Sbjct: 499 LSRMNSSEVDKYR 511
>gi|194763447|ref|XP_001963844.1| GF21236 [Drosophila ananassae]
gi|190618769|gb|EDV34293.1| GF21236 [Drosophila ananassae]
Length = 1211
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 99/141 (70%), Gaps = 11/141 (7%)
Query: 18 KDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVK 77
K E + E+DIDPLDA+MQ V+ EMR+VN P+ SK GV+I+TGV K
Sbjct: 356 KQEREPSPEDDIDPLDAYMQEVNNEMRRVNNFVNPS----------SKAQGVMILTGVAK 405
Query: 78 KSVEKAK-GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRK 136
K K GEL+E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK
Sbjct: 406 KKSAAVKKGELIEQNMDSLEYSSEDELEDIRDTANNLAMKHRKELAKIDHSSVSYAPFRK 465
Query: 137 DFYVEVPEIARMTPEEVEKYK 157
+FYVEVPE++RMT EVEKY+
Sbjct: 466 NFYVEVPELSRMTAAEVEKYR 486
>gi|225579808|gb|ACN94086.1| unknown [Drosophila melanogaster]
Length = 1198
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK- 84
E++IDPLDA+MQ V+ EMR+VN P PA S GVVI+TGV KK K
Sbjct: 370 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS----QGVVILTGVAKKKTTTLKK 419
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GE++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 420 GEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPE 479
Query: 145 IARMTPEEVEKYK 157
+ RMT +VEKY+
Sbjct: 480 LTRMTAADVEKYR 492
>gi|225579799|gb|ACN94078.1| unknown [Drosophila melanogaster]
Length = 1195
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK- 84
E++IDPLDA+MQ V+ EMR+VN P PA S GVVI+TGV KK K
Sbjct: 370 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS----QGVVILTGVAKKKTTTLKK 419
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GE++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 420 GEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPE 479
Query: 145 IARMTPEEVEKYK 157
+ RMT +VEKY+
Sbjct: 480 LTRMTAADVEKYR 492
>gi|24642151|ref|NP_573020.2| CG6227 [Drosophila melanogaster]
gi|7293060|gb|AAF48446.1| CG6227 [Drosophila melanogaster]
gi|54650792|gb|AAV36975.1| LD41277p [Drosophila melanogaster]
gi|220951960|gb|ACL88523.1| CG6227-PA [synthetic construct]
gi|225579871|gb|ACN94142.1| unknown [Drosophila melanogaster]
gi|225579880|gb|ACN94150.1| unknown [Drosophila melanogaster]
gi|225579907|gb|ACN94174.1| unknown [Drosophila melanogaster]
gi|225579925|gb|ACN94190.1| unknown [Drosophila melanogaster]
gi|225579943|gb|ACN94206.1| unknown [Drosophila melanogaster]
gi|225579970|gb|ACN94230.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK- 84
E++IDPLDA+MQ V+ EMR+VN P PA S GVVI+TGV KK K
Sbjct: 370 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS----QGVVILTGVAKKKTTTLKK 419
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GE++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 420 GEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPE 479
Query: 145 IARMTPEEVEKYK 157
+ RMT +VEKY+
Sbjct: 480 LTRMTAADVEKYR 492
>gi|225579790|gb|ACN94070.1| unknown [Drosophila melanogaster]
Length = 1198
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK- 84
E++IDPLDA+MQ V+ EMR+VN P PA S GVVI+TGV KK K
Sbjct: 370 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS----QGVVILTGVAKKKTTTLKK 419
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GE++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 420 GEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPE 479
Query: 145 IARMTPEEVEKYK 157
+ RMT +VEKY+
Sbjct: 480 LTRMTAADVEKYR 492
>gi|225579817|gb|ACN94094.1| unknown [Drosophila melanogaster]
Length = 1227
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK- 84
E++IDPLDA+MQ V+ EMR+VN P PA S GVVI+TGV KK K
Sbjct: 373 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS----QGVVILTGVAKKKTTTLKK 422
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GE++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 423 GEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPE 482
Query: 145 IARMTPEEVEKYK 157
+ RMT +VEKY+
Sbjct: 483 LTRMTAADVEKYR 495
>gi|225579772|gb|ACN94054.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK- 84
E++IDPLDA+MQ V+ EMR+VN P PA S GVVI+TGV KK K
Sbjct: 370 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS----QGVVILTGVAKKKTTTLKK 419
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GE++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 420 GEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPE 479
Query: 145 IARMTPEEVEKYK 157
+ RMT +VEKY+
Sbjct: 480 LTRMTAADVEKYR 492
>gi|225579763|gb|ACN94046.1| unknown [Drosophila melanogaster]
gi|225579781|gb|ACN94062.1| unknown [Drosophila melanogaster]
gi|225579826|gb|ACN94102.1| unknown [Drosophila melanogaster]
gi|225579835|gb|ACN94110.1| unknown [Drosophila melanogaster]
gi|225579853|gb|ACN94126.1| unknown [Drosophila melanogaster]
gi|225579862|gb|ACN94134.1| unknown [Drosophila melanogaster]
gi|225579889|gb|ACN94158.1| unknown [Drosophila melanogaster]
gi|225579898|gb|ACN94166.1| unknown [Drosophila melanogaster]
gi|225579916|gb|ACN94182.1| unknown [Drosophila melanogaster]
gi|225579934|gb|ACN94198.1| unknown [Drosophila melanogaster]
gi|225579952|gb|ACN94214.1| unknown [Drosophila melanogaster]
gi|225579961|gb|ACN94222.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK- 84
E++IDPLDA+MQ V+ EMR+VN P PA S GVVI+TGV KK K
Sbjct: 370 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS----QGVVILTGVAKKKTTTLKK 419
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GE++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 420 GEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPE 479
Query: 145 IARMTPEEVEKYK 157
+ RMT +VEKY+
Sbjct: 480 LTRMTAADVEKYR 492
>gi|225579844|gb|ACN94118.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK- 84
E++IDPLDA+MQ V+ EMR+VN P PA S GVVI+TGV KK K
Sbjct: 370 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS----QGVVILTGVAKKKTTTLKK 419
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GE++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 420 GEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPE 479
Query: 145 IARMTPEEVEKYK 157
+ RMT +VEKY+
Sbjct: 480 LTRMTAADVEKYR 492
>gi|195356214|ref|XP_002044575.1| GM20179 [Drosophila sechellia]
gi|194132206|gb|EDW53828.1| GM20179 [Drosophila sechellia]
Length = 1214
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 11/133 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK- 84
E++IDPLDA+MQ V+ EMR+VN P PA S GVVI+TGV KK K
Sbjct: 361 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS----QGVVILTGVAKKKTTTLKK 410
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GE++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE
Sbjct: 411 GEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPE 470
Query: 145 IARMTPEEVEKYK 157
+ RMT +VEKY+
Sbjct: 471 LTRMTAGDVEKYR 483
>gi|195060349|ref|XP_001995786.1| GH17577 [Drosophila grimshawi]
gi|193896572|gb|EDV95438.1| GH17577 [Drosophila grimshawi]
Length = 1302
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 11/125 (8%)
Query: 34 AFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK-SVEKAKGELMEENQ 92
A+MQ V++EMR+VN P K GVVI+TGV KK + + KGEL+E+N
Sbjct: 441 AYMQEVNKEMRRVNHFVTPP----------PKAQGVVILTGVAKKKTTQVKKGELIEQNM 490
Query: 93 DGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEE 152
D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE+ RMT E
Sbjct: 491 DSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVSYAPFRKNFYVEVPELGRMTNSE 550
Query: 153 VEKYK 157
V+KY+
Sbjct: 551 VDKYR 555
>gi|67459931|ref|NP_001019988.1| probable ATP-dependent RNA helicase DDX46 [Danio rerio]
gi|82277867|sp|Q4TVV3.1|DDX46_DANRE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|66473312|gb|AAY46301.1| DEAD box protein 46 [Danio rerio]
Length = 1018
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 101/161 (62%), Gaps = 7/161 (4%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEED-----IDPLDAFMQGVHEEMRKVNKPAVPTTAD 56
KKW+LEDD +E + + E + EE+ +DPLDA+M+ V EE++K N + D
Sbjct: 164 KKWSLEDDDEEQDKAAEAEESERMEEEEVGEEVDPLDAYMEEVKEEVKKFNMGTMKGAND 223
Query: 57 VKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASK 116
K S +K VV + + K KGELME +QD +EYSSEEE+ DL + +K
Sbjct: 224 KKGGMSVTKVVTVVKTKKMPHAT--KKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTK 281
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
Q+K L VDH I+Y PFRK+FYVEVPE+ARM+PEEV +Y+
Sbjct: 282 QRKVLEPVDHQKIQYEPFRKNFYVEVPELARMSPEEVSEYR 322
>gi|348527894|ref|XP_003451454.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Oreochromis niloticus]
Length = 1038
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 7/154 (4%)
Query: 8 DDSDEDENDNKDENG----KTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSG 63
+D ++ ND+KD+ +T E+DIDPLDA+M+ V +E++K N A+
Sbjct: 193 NDGKKEGNDDKDKETPMEQQTEEDDIDPLDAYMEEVKQEVKKFNIGAMKGNDKKGAMTVT 252
Query: 64 SKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSK 123
V G K KGELME +QD +EYSSEEE+ DL + +KQ+K L
Sbjct: 253 KVVTVVKTKKG---PHTHKKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKILEP 309
Query: 124 VDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
VDH+ I+Y P+RK+FYVEVPE+A+MT EEV Y+
Sbjct: 310 VDHTKIQYEPYRKNFYVEVPELAKMTTEEVNAYR 343
>gi|126632201|gb|AAI33101.1| Ddx46 protein [Danio rerio]
Length = 1032
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 84/129 (65%), Gaps = 2/129 (1%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELM 88
+DPLDA+M+ V EE++K N + D K S +K VV + + K KGELM
Sbjct: 210 VDPLDAYMEEVKEEVKKFNMGTMKGANDKKGGMSVTKVVTVVKTKKMPHAT--KKKGELM 267
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
E +QD +EYSSEEE+ DL + +KQ+K L VDH I+Y PFRK+FYVEVPE+ARM
Sbjct: 268 ENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFRKNFYVEVPELARM 327
Query: 149 TPEEVEKYK 157
+PEEV +Y+
Sbjct: 328 SPEEVSEYR 336
>gi|363739175|ref|XP_414629.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Gallus
gallus]
Length = 1028
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDEN--DNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LEDD D+DE + + E + +E++DPLDA+M+ V EE++K N +V +
Sbjct: 193 KKWSLEDDDDDDEETAEGEKEGNEVEDEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSEK 252
Query: 60 ADS-GSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
V+ T EK KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 253 KSGPTVTKVVTVVTTKKAVVETEKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 312
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+MT EEV Y+
Sbjct: 313 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYR 351
>gi|326928709|ref|XP_003210518.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Meleagris gallopavo]
Length = 1027
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDEN--DNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LEDD D+DE + + E + +E++DPLDA+M+ V EE++K N +V +
Sbjct: 192 KKWSLEDDDDDDEETAEGEKEGNEVEDEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSEK 251
Query: 60 ADS-GSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
V+ T EK KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 252 KSGPTVTKVVTVVTTKKAVVETEKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 311
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+MT EEV Y+
Sbjct: 312 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYR 350
>gi|224068070|ref|XP_002188600.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Taeniopygia
guttata]
Length = 1031
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 82/138 (59%), Gaps = 13/138 (9%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAG-------VVIVTGVVKKS 79
E++DPLDA+M+ V EE++K N VK K G V+ T
Sbjct: 223 EELDPLDAYMEEVKEEVKKFN------MRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAAE 276
Query: 80 VEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFY 139
EK KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FY
Sbjct: 277 SEKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFY 336
Query: 140 VEVPEIARMTPEEVEKYK 157
VEVPE+A+MT EEV Y+
Sbjct: 337 VEVPELAKMTQEEVNVYR 354
>gi|427793119|gb|JAA62011.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1147
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 104/197 (52%), Gaps = 43/197 (21%)
Query: 2 KKWNLEDDSDEDEN-------------------------DNKDENGKTAE---------- 26
KKW+LEDD ++D D D + KT E
Sbjct: 205 KKWSLEDDEEDDSGPPPPPLKDEPDDGPSLPSLKKKLDPDEADADTKTEEVKKEAEDKQE 264
Query: 27 ----EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAG--VVIVTGVVKKSV 80
+ IDPLDA+M G+ E++++ A+ T DV A + + A V ++ GV KK
Sbjct: 265 EEEDDGIDPLDAYMMGIQNEVKQLKDKALKT--DVGAAAAAPEKANNVVTMIVGVAKKKE 322
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
+K KGELME+N D LEYSSEEE EDL +T NL + + K+ V I Y PFRK+FY+
Sbjct: 323 DKKKGELMEQNVDALEYSSEEETEDLQTTMNNLQAGKAKKPVAVSIEDISYAPFRKNFYI 382
Query: 141 EVPEIARMTPEEVEKYK 157
EVPE+A+MTP EVE +
Sbjct: 383 EVPELAKMTPGEVETLR 399
>gi|427795059|gb|JAA62981.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1123
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 104/197 (52%), Gaps = 43/197 (21%)
Query: 2 KKWNLEDDSDEDEN-------------------------DNKDENGKTAE---------- 26
KKW+LEDD ++D D D + KT E
Sbjct: 181 KKWSLEDDEEDDSGPPPPPLKDEPDDGPSLPSLKKKLDPDEADADTKTEEVKKEAEDKQE 240
Query: 27 ----EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAG--VVIVTGVVKKSV 80
+ IDPLDA+M G+ E++++ A+ T DV A + + A V ++ GV KK
Sbjct: 241 EEEDDGIDPLDAYMMGIQNEVKQLKDKALKT--DVGAAAAAPEKANNVVTMIVGVAKKKE 298
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
+K KGELME+N D LEYSSEEE EDL +T NL + + K+ V I Y PFRK+FY+
Sbjct: 299 DKKKGELMEQNVDALEYSSEEETEDLQTTMNNLQAGKAKKPVAVSIEDISYAPFRKNFYI 358
Query: 141 EVPEIARMTPEEVEKYK 157
EVPE+A+MTP EVE +
Sbjct: 359 EVPELAKMTPGEVETLR 375
>gi|395815579|ref|XP_003781303.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Otolemur garnettii]
Length = 1031
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 101/165 (61%), Gaps = 15/165 (9%)
Query: 2 KKWNLEDDSDEDENDNKDEN-GKTAE-EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LED+ +++++ K E G E E++DPLDA+M+ V EE++K N T VK
Sbjct: 196 KKWSLEDEDEDEDDPAKAETEGSDMEGEELDPLDAYMEEVKEEVKKFN------TRSVKG 249
Query: 60 ADSGSKPAG-------VVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAAN 112
K +G V+ T +K KGELME +QD +EYSSEEE+ DL +
Sbjct: 250 GGGNEKKSGPTVTTVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTG 309
Query: 113 LASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+KQ+K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 310 YQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|427794033|gb|JAA62468.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1111
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 104/197 (52%), Gaps = 43/197 (21%)
Query: 2 KKWNLEDDSDEDEN-------------------------DNKDENGKTAE---------- 26
KKW+LEDD ++D D D + KT E
Sbjct: 203 KKWSLEDDEEDDSGPPPPPLKDEPDDGPSLPSLKKKLDPDEADADTKTEEVKKEAEDKQE 262
Query: 27 ----EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAG--VVIVTGVVKKSV 80
+ IDPLDA+M G+ E++++ A+ T DV A + + A V ++ GV KK
Sbjct: 263 EEEDDGIDPLDAYMMGIQNEVKQLKDKALKT--DVGAAAAAPEKANNVVTMIVGVAKKKE 320
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
+K KGELME+N D LEYSSEEE EDL +T NL + + K+ V I Y PFRK+FY+
Sbjct: 321 DKKKGELMEQNVDALEYSSEEETEDLQTTMNNLQAGKAKKPVAVSIEDISYAPFRKNFYI 380
Query: 141 EVPEIARMTPEEVEKYK 157
EVPE+A+MTP EVE +
Sbjct: 381 EVPELAKMTPGEVETLR 397
>gi|395815581|ref|XP_003781304.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Otolemur garnettii]
Length = 872
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 101/165 (61%), Gaps = 15/165 (9%)
Query: 2 KKWNLEDDSDEDENDNKDEN-GKTAE-EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LED+ +++++ K E G E E++DPLDA+M+ V EE++K N T VK
Sbjct: 37 KKWSLEDEDEDEDDPAKAETEGSDMEGEELDPLDAYMEEVKEEVKKFN------TRSVKG 90
Query: 60 ADSGSKPAG-------VVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAAN 112
K +G V+ T +K KGELME +QD +EYSSEEE+ DL +
Sbjct: 91 GGGNEKKSGPTVTTVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTG 150
Query: 113 LASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+KQ+K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 151 YQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 195
>gi|241618030|ref|XP_002408280.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215502947|gb|EEC12441.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 1025
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 85/132 (64%), Gaps = 5/132 (3%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E+D+DPLDA+M +H+E++++ A + S K V ++ GV KK +K KG
Sbjct: 205 EDDVDPLDAYMIDIHKEVKQLKDKAFKGNSK-----SEQKANKVTVIVGVAKKKEDKKKG 259
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
ELME+N D LEYSSEEE EDL S L + + K+ + V I Y PFRK+FY+EVPE+
Sbjct: 260 ELMEQNVDALEYSSEEEGEDLQSAMQGLQNNKAKKPATVSIEDISYAPFRKNFYIEVPEL 319
Query: 146 ARMTPEEVEKYK 157
A+MTP EVE ++
Sbjct: 320 AKMTPGEVELWR 331
>gi|149039843|gb|EDL93959.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 940
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + +E++DPLDA+M+ V EE++K N +V A + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|20806137|ref|NP_620798.1| probable ATP-dependent RNA helicase DDX46 [Rattus norvegicus]
gi|81890303|sp|Q62780.1|DDX46_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=Helicase of
117.4 kDa
gi|897915|gb|AAC52210.1| RNA helicase [Rattus norvegicus]
gi|78174325|gb|AAI07591.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 1032
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + +E++DPLDA+M+ V EE++K N +V A + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|62089534|gb|AAH92240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 1027
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + +E++DPLDA+M+ V EE++K N +V A + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGTEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|160420299|ref|NP_666087.3| probable ATP-dependent RNA helicase DDX46 [Mus musculus]
Length = 1031
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + +E++DPLDA+M+ V EE++K N +V A + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGTEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|85540944|sp|Q569Z5.2|DDX46_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
Length = 1032
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + +E++DPLDA+M+ V EE++K N +V A + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGTEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|39104531|dbj|BAC98030.2| mKIAA0801 protein [Mus musculus]
Length = 1044
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + +E++DPLDA+M+ V EE++K N +V A + K
Sbjct: 213 KKWSLEDDDDDEDDPAEAEKEGTEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEK 272
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 273 KSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 332
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 333 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 371
>gi|148709275|gb|EDL41221.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 963
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + +E++DPLDA+M+ V EE++K N +V A + K
Sbjct: 128 KKWSLEDDDDDEDDPAEAEKEGTEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEK 187
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 188 KSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 247
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 248 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 286
>gi|5410326|gb|AAD43033.1| RNA helicase [Homo sapiens]
Length = 1031
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + +E++DPLDA+M+ V EE++K N +V A + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|327278500|ref|XP_003224000.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Anolis
carolinensis]
Length = 1030
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 96/158 (60%), Gaps = 2/158 (1%)
Query: 2 KKWNLEDDSDEDEN--DNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LEDD D+DE + + E + +E++DPLDA+M+ V EE++K N +V K
Sbjct: 195 KKWSLEDDDDDDEETAEGEKEGNEIEDEELDPLDAYMEEVKEEVKKFNMRSVKGGGSEKK 254
Query: 60 ADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK 119
+ V+ T EK KGELM +QD +EYSSEEE+ DL + +K +K
Sbjct: 255 SGPTVTKVVTVVKTKKASPETEKKKGELMVNDQDAMEYSSEEEEVDLQTALTGYQTKHRK 314
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
L VDH IEY +RK+FYVEVPE+A+MT EEV Y+
Sbjct: 315 LLEPVDHGKIEYETYRKNFYVEVPELAKMTQEEVTSYR 352
>gi|432895747|ref|XP_004076142.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Oryzias
latipes]
Length = 1043
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 90/141 (63%), Gaps = 18/141 (12%)
Query: 25 AEED-IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK----- 78
AEED +DPLDA+M+ V +E++K N +D+K G+ G ++VT VV
Sbjct: 219 AEEDEVDPLDAYMEEVKQEVKKFN------MSDMK----GNDKKGAMMVTKVVTVVKTKK 268
Query: 79 --SVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRK 136
K KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH+ I+Y P+RK
Sbjct: 269 GAGTHKKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKILEPVDHAKIQYEPYRK 328
Query: 137 DFYVEVPEIARMTPEEVEKYK 157
+FYVEVPE+A+MT EEV Y+
Sbjct: 329 NFYVEVPELAKMTTEEVNAYR 349
>gi|354471891|ref|XP_003498174.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Cricetulus griseus]
Length = 1029
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 102/160 (63%), Gaps = 5/160 (3%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V A K
Sbjct: 194 KKWSLEDDDDDEDDPAEAEKEGSEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGAG-KE 252
Query: 60 ADSGSKPAGVVIVTGVVKKSVE--KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQ 117
SG VV V K V+ K KGELME +QD +EYSSEEE+ DL + +KQ
Sbjct: 253 KKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQ 312
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 313 RKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 352
>gi|86355147|dbj|BAE78808.1| DEAD-box containing Prp5-like [Pelodiscus sinensis]
Length = 350
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVK----PADSGSKPAGVVIVTGVVKKSVEKAK 84
+DPLDA+M+ V EE++K N +V + P + V EK K
Sbjct: 163 LDPLDAYMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAV---ESEKKK 219
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVPE
Sbjct: 220 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 279
Query: 145 IARMTPEEVEKYK 157
+A+MT EEV Y+
Sbjct: 280 LAKMTLEEVNVYR 292
>gi|344240362|gb|EGV96465.1| putative ATP-dependent RNA helicase DDX46 [Cricetulus griseus]
Length = 1172
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 102/160 (63%), Gaps = 5/160 (3%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V A K
Sbjct: 337 KKWSLEDDDDDEDDPAEAEKEGSEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGAG-KE 395
Query: 60 ADSGSKPAGVVIVTGVVKKSVE--KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQ 117
SG VV V K V+ K KGELME +QD +EYSSEEE+ DL + +KQ
Sbjct: 396 KKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQ 455
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 456 RKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 495
>gi|390342961|ref|XP_784902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Strongylocentrotus purpuratus]
Length = 954
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 90/142 (63%), Gaps = 18/142 (12%)
Query: 34 AFMQGVHEEMRKVNK------PAVPTTADVKPAD-SGSKPAGVVIVTGVVKKS------- 79
AFM GVH E++K+ PAV P + +G + IVTGVVKK
Sbjct: 333 AFMMGVHAEVKKIGSKDKKGPPAVEKAVKPTPGNGTGGEAPKFSIVTGVVKKKSVPVPMP 392
Query: 80 ---VEKAKGELMEENQDGLEYSSEEEQE-DLTSTAANLASKQKKELSKVDHSTIEYLPFR 135
KGELME +QD +EYSSEEE+E +L T A L K+KKEL+KVDHS I+Y P+R
Sbjct: 393 VIVTSGKKGELMENDQDAMEYSSEEEKESNLMDTMAALEQKKKKELAKVDHSKIDYPPYR 452
Query: 136 KDFYVEVPEIARMTPEEVEKYK 157
KDFYVEVPE+AR+TPEEV+K +
Sbjct: 453 KDFYVEVPELARLTPEEVDKRR 474
>gi|301612896|ref|XP_002935944.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 1049
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 85/131 (64%), Gaps = 5/131 (3%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVE--KAKGE 86
+DPLDA+M+ V EE++K N +V ++ K +G VV V K +VE K KGE
Sbjct: 226 LDPLDAYMEEVKEEVKKFNMGSVKGGSEKK---TGPTVTKVVTVMTTKKVAVETTKKKGE 282
Query: 87 LMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIA 146
LME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY +RK+FYVEVPE+A
Sbjct: 283 LMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKLLEPVDHGKIEYESYRKNFYVEVPELA 342
Query: 147 RMTPEEVEKYK 157
+MT EEV Y+
Sbjct: 343 KMTTEEVNSYR 353
>gi|301612898|ref|XP_002935945.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 1024
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 85/131 (64%), Gaps = 5/131 (3%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVE--KAKGE 86
+DPLDA+M+ V EE++K N +V ++ K +G VV V K +VE K KGE
Sbjct: 201 LDPLDAYMEEVKEEVKKFNMGSVKGGSEKK---TGPTVTKVVTVMTTKKVAVETTKKKGE 257
Query: 87 LMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIA 146
LME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY +RK+FYVEVPE+A
Sbjct: 258 LMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKLLEPVDHGKIEYESYRKNFYVEVPELA 317
Query: 147 RMTPEEVEKYK 157
+MT EEV Y+
Sbjct: 318 KMTTEEVNSYR 328
>gi|391335132|ref|XP_003741951.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Metaseiulus occidentalis]
Length = 1171
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 96/158 (60%), Gaps = 17/158 (10%)
Query: 8 DDSDEDENDNKDENGKTAEED-IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKP 66
+ + E +N+ +E + +D IDPLDAFM+G+ +++R + + A P A + P
Sbjct: 342 NGNSETQNETTEEKMEQGSDDEIDPLDAFMEGIKKQVRTIARSA-PVKA------VAAVP 394
Query: 67 AGVVIVTGVVKKSVEK--AKGELMEENQDGLEYSSEEEQEDL-----TSTAANLASKQKK 119
+ V G +K+ K AKGE+ME+NQDGLEYS E E+EDL T ++A L +K+
Sbjct: 395 SASTTVKGSGRKARGKAGAKGEVMEQNQDGLEYSDEGEEEDLQQAMDTYSSATLGKIKKQ 454
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+ + I + PFRKDFY+EVPE+A+MTP EVE +
Sbjct: 455 --TTITFDDITFQPFRKDFYIEVPELAQMTPAEVEALR 490
>gi|291387348|ref|XP_002710262.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Oryctolagus
cuniculus]
Length = 1030
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 100/160 (62%), Gaps = 5/160 (3%)
Query: 2 KKWNLEDDSDEDENDN---KDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DV 57
KKW+LEDD D++++ KD N + E++DPLDA+M+ V EE++K N +V +
Sbjct: 195 KKWSLEDDDDDEDDAAEAEKDGN-EVEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNE 253
Query: 58 KPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQ 117
K + V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ
Sbjct: 254 KKSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQ 313
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 314 RKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 353
>gi|444517226|gb|ELV11421.1| putative ATP-dependent RNA helicase DDX46 [Tupaia chinensis]
Length = 1078
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 102/161 (63%), Gaps = 7/161 (4%)
Query: 2 KKWNLEDDSDEDENDN---KDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--D 56
KKW+LEDD D++++ KD N EE +DPLDA+M+ V EE++K N +V +
Sbjct: 243 KKWSLEDDDDDEDDPAEAEKDGNEMEGEE-LDPLDAYMEEVKEEVKKFNMRSVKGGGGNE 301
Query: 57 VKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASK 116
K + +K VV V S +K KGELME +QD +EYSSEEE+ DL + +K
Sbjct: 302 KKSGPTVTKVVTVVTTKKAVADS-DKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTK 360
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
Q+K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 361 QRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 401
>gi|119582643|gb|EAW62239.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_b [Homo
sapiens]
Length = 471
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 148 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 207
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 208 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 267
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 268 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 306
>gi|417405652|gb|JAA49530.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 1033
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 197 KKWSLEDDDDDEDDPAEAEKEGNEVEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 256
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 257 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 316
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 317 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 355
>gi|402872563|ref|XP_003900179.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Papio anubis]
Length = 984
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|119582642|gb|EAW62238.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
gi|119582646|gb|EAW62242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
Length = 883
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|432117756|gb|ELK37909.1| Putative ATP-dependent RNA helicase DDX46 [Myotis davidii]
Length = 1191
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 433 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 492
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 493 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 552
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 553 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 591
>gi|348575055|ref|XP_003473305.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Cavia porcellus]
Length = 1031
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|158257008|dbj|BAF84477.1| unnamed protein product [Homo sapiens]
Length = 1032
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|355691613|gb|EHH26798.1| hypothetical protein EGK_16865 [Macaca mulatta]
Length = 1033
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|348575057|ref|XP_003473306.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Cavia porcellus]
Length = 1032
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|75061689|sp|Q5R6D8.1|DDX46_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|55731939|emb|CAH92678.1| hypothetical protein [Pongo abelii]
Length = 1032
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|23336902|tpg|DAA00076.1| TPA_exp: Prp5-like DEAD-box protein [Homo sapiens]
gi|410212896|gb|JAA03667.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212898|gb|JAA03668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212900|gb|JAA03669.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256700|gb|JAA16317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256702|gb|JAA16318.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410300506|gb|JAA28853.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410350251|gb|JAA41729.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
Length = 1032
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|410948190|ref|XP_003980824.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Felis catus]
Length = 1030
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 195 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 254
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 255 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 314
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 315 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 353
>gi|332234495|ref|XP_003266442.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Nomascus
leucogenys]
Length = 1031
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|431892646|gb|ELK03079.1| Putative ATP-dependent RNA helicase DDX46 [Pteropus alecto]
Length = 1580
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 99/165 (60%), Gaps = 15/165 (9%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N VK
Sbjct: 524 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFN------MRSVKG 577
Query: 60 ADSGSKPAGVVIVTGVVKKSV-------EKAKGELMEENQDGLEYSSEEEQEDLTSTAAN 112
K +G + V + +K KGELME +QD +EYSSEEE+ DL +
Sbjct: 578 GGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTG 637
Query: 113 LASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+KQ+K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 638 YQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 682
>gi|40788370|dbj|BAA34521.2| KIAA0801 protein [Homo sapiens]
Length = 1058
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 222 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 281
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 282 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 341
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 342 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 380
>gi|73971268|ref|XP_531911.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Canis lupus
familiaris]
gi|194219918|ref|XP_001918233.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Equus
caballus]
gi|426229554|ref|XP_004008855.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Ovis aries]
Length = 1031
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|390459218|ref|XP_002744211.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Callithrix
jacchus]
Length = 1031
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|301754307|ref|XP_002912967.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Ailuropoda melanoleuca]
Length = 1031
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|41327773|ref|NP_055644.2| probable ATP-dependent RNA helicase DDX46 [Homo sapiens]
gi|332821955|ref|XP_517939.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan
troglodytes]
gi|397518269|ref|XP_003829316.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan paniscus]
gi|116241326|sp|Q7L014.2|DDX46_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=PRP5 homolog
gi|15126766|gb|AAH12304.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapiens]
gi|119582645|gb|EAW62241.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_d [Homo
sapiens]
Length = 1031
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|344264944|ref|XP_003404549.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Loxodonta
africana]
Length = 1031
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|386781262|ref|NP_001248109.1| probable ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|380818496|gb|AFE81121.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|383423315|gb|AFH34871.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|384950636|gb|AFI38923.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
Length = 1032
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|119582644|gb|EAW62240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_c [Homo
sapiens]
Length = 1032
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 354
>gi|426350064|ref|XP_004042602.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like, partial
[Gorilla gorilla gorilla]
Length = 882
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 47 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 106
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 107 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 166
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 167 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 205
>gi|355683297|gb|AER97080.1| DEAD box polypeptide 46 [Mustela putorius furo]
Length = 842
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 99/165 (60%), Gaps = 15/165 (9%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N VK
Sbjct: 7 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFN------MRSVKG 60
Query: 60 ADSGSKPAG-------VVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAAN 112
K +G V+ T +K KGELME +QD +EYSSEEE+ DL +
Sbjct: 61 GGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTG 120
Query: 113 LASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+KQ+K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 121 YQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 165
>gi|119895518|ref|XP_586902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|297477226|ref|XP_002689237.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|296485325|tpg|DAA27440.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Bos taurus]
Length = 1031
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 255
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 256 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 315
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 316 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSLEEVNVFR 354
>gi|351708460|gb|EHB11379.1| Putative ATP-dependent RNA helicase DDX46 [Heterocephalus glaber]
Length = 1255
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAV-PTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E++DPLDA+M+ V EE++K N +V + K + V+ T +K KG
Sbjct: 494 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKG 553
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
ELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVPE+
Sbjct: 554 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPEL 613
Query: 146 ARMTPEEVEKYK 157
A+M+ EEV ++
Sbjct: 614 AKMSQEEVNVFR 625
>gi|47221754|emb|CAG08808.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1046
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPAD 61
KKW+LEDD + +E + AE+D+DPLDA+M+ V +E++K N A+
Sbjct: 173 KKWSLEDDDEGEEKEKDIPMELEAEDDVDPLDAYMEEVKQEVKKFNIGAMKGNDKKGAMT 232
Query: 62 SGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKEL 121
V G ++ K KGELME +QD +EYSSEEE+ DL + +KQ+K L
Sbjct: 233 VTKVVTVVKTKKG---PNMHKKKGELMENDQDAMEYSSEEEEVDLQTALTGFRTKQRKVL 289
Query: 122 SKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
VDH I+Y +RK+FYVEVPE+A+M+ E+V Y+
Sbjct: 290 EPVDHEKIQYESYRKNFYVEVPELAKMSQEDVNAYR 325
>gi|345327882|ref|XP_001510706.2| PREDICTED: probable ATP-dependent RNA helicase DDX46, partial
[Ornithorhynchus anatinus]
Length = 973
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 96/156 (61%), Gaps = 5/156 (3%)
Query: 2 KKWNLEDDSDEDEN---DNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVK 58
KKW+LEDD D++E KD N + +E++DPLDA+M+ V EE++K N +V +
Sbjct: 138 KKWSLEDDDDDEEEPAEGEKDGN-EVEDEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSE 196
Query: 59 PADS-GSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQ 117
V+ T EK KGELME +QD +EYSSEEE+ DL + +KQ
Sbjct: 197 KKSGPTVTKVVTVVTTKKATVESEKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQ 256
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
+K L VDH IEY P+RK+FYVEVPE+A+M+ EEV
Sbjct: 257 RKLLEPVDHGKIEYEPYRKNFYVEVPELAKMSLEEV 292
>gi|350536495|ref|NP_001233197.1| probable ATP-dependent RNA helicase DDX46 [Sus scrofa]
gi|336092215|gb|AEI00731.1| DEAD box polypeptide 46 [Sus scrofa]
Length = 1032
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 98/165 (59%), Gaps = 15/165 (9%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N VK
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEVEGEELDPLDAYMEEVKEEVKKFN------MRSVKG 249
Query: 60 ADSGSKPAGVVIVTGVVKKSV-------EKAKGELMEENQDGLEYSSEEEQEDLTSTAAN 112
K +G + V + +K KGELME +QD +EYSSEEE+ DL +
Sbjct: 250 GGGNEKKSGATVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTG 309
Query: 113 LASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+KQ+K L VDH IEY PFRK+FYVEV E+A+M+ EEV ++
Sbjct: 310 YQTKQRKLLEPVDHGKIEYEPFRKNFYVEVLELAKMSQEEVNVFR 354
>gi|410915182|ref|XP_003971066.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Takifugu
rubripes]
Length = 1040
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 81/139 (58%), Gaps = 15/139 (10%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKS----- 79
AE+D+DPLDA+M+ V +E++K N + P K + + V
Sbjct: 215 AEDDVDPLDAYMEEVKQEVKKFN---------IGPMKGNDKKGAMTVTKVVTVVKTKKGP 265
Query: 80 -VEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
K KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH I+Y +RK+F
Sbjct: 266 HTHKKKGELMENDQDAMEYSSEEEEVDLQTALTGFRTKQRKVLEPVDHEKIQYESYRKNF 325
Query: 139 YVEVPEIARMTPEEVEKYK 157
YVEVPE+A+M+ E+V Y+
Sbjct: 326 YVEVPELAKMSQEDVNAYR 344
>gi|355750194|gb|EHH54532.1| hypothetical protein EGM_15393, partial [Macaca fascicularis]
Length = 1029
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 192 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 251
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 252 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 311
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K L VDH IEY FRK+FYVEVPE+A+M+ EEV ++
Sbjct: 312 KLLEPVDHGKIEYERFRKNFYVEVPELAKMSQEEVNVFR 350
>gi|395504324|ref|XP_003756504.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Sarcophilus
harrisii]
Length = 1030
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADS-GSKPAGVVIVTGVVKKSVEKAK 84
+E++DPLDA+M+ V EE++K N +V + V+ T EK K
Sbjct: 221 DEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKATVESEKKK 280
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY P+RK+FYVEVPE
Sbjct: 281 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPYRKNFYVEVPE 340
Query: 145 IARMTPEEVEKYK 157
+A+M+ +EV ++
Sbjct: 341 LAKMSQDEVNIFR 353
>gi|403256611|ref|XP_003920960.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Saimiri
boliviensis boliviensis]
Length = 893
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA-DVK 58
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N +V + K
Sbjct: 254 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEK 313
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
+ V+ T +K KGELME +QD +EYSSEEE+ DL + +KQ+
Sbjct: 314 KSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQR 373
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPE 151
K L VDH IEY PFRK+FYVEVPE+A+M+ E
Sbjct: 374 KLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQE 406
>gi|334310946|ref|XP_001370541.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Monodelphis domestica]
Length = 1179
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADS-GSKPAGVVIVTGVVKKSVEKAK 84
+E++DPLDA+M+ V EE++K N +V + V+ T EK K
Sbjct: 370 DEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKATVESEKKK 429
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY P+RK+FYVEVPE
Sbjct: 430 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPYRKNFYVEVPE 489
Query: 145 IARMTPEEVEKYK 157
+A+M+ +EV ++
Sbjct: 490 LAKMSQDEVNIFR 502
>gi|321456211|gb|EFX67324.1| hypothetical protein DAPPUDRAFT_302036 [Daphnia pulex]
Length = 797
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 91/126 (72%), Gaps = 14/126 (11%)
Query: 36 MQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGL 95
MQ + E+RKV K DV+ SK +GV+++TGV KK+ K KGEL+E+NQD L
Sbjct: 1 MQDIQSEVRKVQK------LDVQK----SKGSGVMVMTGVAKKA-AKKKGELVEQNQDAL 49
Query: 96 EYSSEEEQEDLTSTAANLAS---KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEE 152
EYSSEEE EDL S + LA+ KQK+++ K+DH+ I Y PFRK+FYVEVP+IARMT EE
Sbjct: 50 EYSSEEESEDLASAMSGLANSNIKQKEKVFKIDHNKINYFPFRKNFYVEVPDIARMTQEE 109
Query: 153 VEKYKE 158
V++Y++
Sbjct: 110 VDEYRQ 115
>gi|256088555|ref|XP_002580396.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1544
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 23/174 (13%)
Query: 1 MKKWNLEDDSDEDENDNKDENGK--TAEEDIDPLDAFMQGVHEEM-------------RK 45
+ KWNLEDD DE++ + K+ + T ++D+DPLDA+MQ ++ ++ K
Sbjct: 665 INKWNLEDDEDEEDANKKNIQMEKPTEDDDVDPLDAYMQELNNQVSAGPETTKKDTKITK 724
Query: 46 VNKPAVPTTADVKPA--DSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQ 103
++ ++ T+ D A D KP + V+K+ +GELME N D LEYSSEEE
Sbjct: 725 QSEMSLKTSKDTDHASSDPSVKPKQQL----VIKRKRIIGRGELMESNIDELEYSSEEED 780
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+ A L K K L +DHS IEY PFRK+FYVEVPE+A+M+ E+V+ Y+
Sbjct: 781 TTIEDALAQLQKKDK--LQPIDHSKIEYFPFRKNFYVEVPELAKMSKEDVKAYR 832
>gi|256088559|ref|XP_002580398.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1476
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 23/174 (13%)
Query: 1 MKKWNLEDDSDEDENDNKDENGK--TAEEDIDPLDAFMQGVHEEM-------------RK 45
+ KWNLEDD DE++ + K+ + T ++D+DPLDA+MQ ++ ++ K
Sbjct: 597 INKWNLEDDEDEEDANKKNIQMEKPTEDDDVDPLDAYMQELNNQVSAGPETTKKDTKITK 656
Query: 46 VNKPAVPTTADVKPA--DSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQ 103
++ ++ T+ D A D KP + V+K+ +GELME N D LEYSSEEE
Sbjct: 657 QSEMSLKTSKDTDHASSDPSVKPKQQL----VIKRKRIIGRGELMESNIDELEYSSEEED 712
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+ A L K K L +DHS IEY PFRK+FYVEVPE+A+M+ E+V+ Y+
Sbjct: 713 TTIEDALAQLQKKDK--LQPIDHSKIEYFPFRKNFYVEVPELAKMSKEDVKAYR 764
>gi|256088557|ref|XP_002580397.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1500
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 23/174 (13%)
Query: 1 MKKWNLEDDSDEDENDNKDENGK--TAEEDIDPLDAFMQGVHEEM-------------RK 45
+ KWNLEDD DE++ + K+ + T ++D+DPLDA+MQ ++ ++ K
Sbjct: 621 INKWNLEDDEDEEDANKKNIQMEKPTEDDDVDPLDAYMQELNNQVSAGPETTKKDTKITK 680
Query: 46 VNKPAVPTTADVKPA--DSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQ 103
++ ++ T+ D A D KP + V+K+ +GELME N D LEYSSEEE
Sbjct: 681 QSEMSLKTSKDTDHASSDPSVKPKQQL----VIKRKRIIGRGELMESNIDELEYSSEEED 736
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+ A L K K L +DHS IEY PFRK+FYVEVPE+A+M+ E+V+ Y+
Sbjct: 737 TTIEDALAQLQKKDK--LQPIDHSKIEYFPFRKNFYVEVPELAKMSKEDVKAYR 788
>gi|260802690|ref|XP_002596225.1| hypothetical protein BRAFLDRAFT_276047 [Branchiostoma floridae]
gi|229281479|gb|EEN52237.1| hypothetical protein BRAFLDRAFT_276047 [Branchiostoma floridae]
Length = 924
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 89/130 (68%), Gaps = 6/130 (4%)
Query: 34 AFMQGVHEEMRKVNKPAVPTTADVKPADS--GSK---PAGVVIVTGVVKKSVEK-AKGEL 87
AFM + EE++++NK V +D+ GS+ V ++T V KK+ ++ A+GEL
Sbjct: 90 AFMNDIKEEVKQINKKDQERVGKVYSSDTTNGSQMETKGKVTVITAVAKKTGKREARGEL 149
Query: 88 MEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIAR 147
+E+NQD LE+SSEEE+EDL T ++ SK KK L+ VDH+ IEY PFRKDFYVEVPE+ +
Sbjct: 150 IEQNQDALEWSSEEEEEDLGQTLSSFQSKAKKLLASVDHTQIEYDPFRKDFYVEVPELQK 209
Query: 148 MTPEEVEKYK 157
++ +EV+ +
Sbjct: 210 LSEDEVKAMR 219
>gi|196012612|ref|XP_002116168.1| hypothetical protein TRIADDRAFT_30653 [Trichoplax adhaerens]
gi|190581123|gb|EDV21201.1| hypothetical protein TRIADDRAFT_30653 [Trichoplax adhaerens]
Length = 976
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 95/156 (60%), Gaps = 18/156 (11%)
Query: 2 KKWNLED-----DSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTAD 56
KKW LED ++ D + D + E+DIDPLDAFM+ ++ E+ +V D
Sbjct: 141 KKWTLEDDDDDDEAYHDSENEDDIKEEDDEDDIDPLDAFMESINSEV------SVIMIID 194
Query: 57 VKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASK 116
+ + S + VTGV KK + AKGELM +QD +EYSSEE+ + T +L K
Sbjct: 195 MLLLEIASSKR-FITVTGVAKK--KTAKGELMSNDQDAMEYSSEEDDQ----TLEDLMEK 247
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEE 152
+KK+++ VDHS I Y PF+++FYVEVPE+A+MT EE
Sbjct: 248 KKKDVNIVDHSKIYYAPFKRNFYVEVPELAKMTSEE 283
>gi|358335026|dbj|GAA28925.2| probable ATP-dependent RNA helicase DDX46, partial [Clonorchis
sinensis]
Length = 746
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 100/167 (59%), Gaps = 15/167 (8%)
Query: 3 KWNLEDDSDEDENDNKDENGK-TAEEDIDPLDAFMQGVHEEMRKVN-------KPAVPTT 54
KWNL+DD DE++ K K T E+++DPLDAFMQ V+EE++ + P T
Sbjct: 175 KWNLDDDDDEEDTSKKSAPSKQTVEDEVDPLDAFMQTVNEEVKSYSDRNQAPTSAPTPKT 234
Query: 55 ADVKPADSGSKPAGVVIVTGVVKKSVEK----AKGELMEENQDGLEYSSEEEQEDLTSTA 110
+ KP G+KP V K K KGELME N D +EYSSEEE+E L
Sbjct: 235 NEYKPL-VGTKPPAKTATPAVTSKPPLKKRIIGKGELMESNIDEMEYSSEEEEETLEDAL 293
Query: 111 ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
A+L K+K L VDHS I Y PFRK+FY+EVPE+A+M+ E+V+ Y+
Sbjct: 294 AHLQKKEK--LLPVDHSKIHYRPFRKNFYIEVPELAKMSKEDVKAYR 338
>gi|360044201|emb|CCD81748.1| unnamed protein product [Schistosoma mansoni]
Length = 1328
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 23/174 (13%)
Query: 1 MKKWNLEDDSDEDENDNKDENGK--TAEEDIDPLDAFMQGVHEEM-------------RK 45
+ KWNLEDD DE++ + K+ + T ++D+DPLDA+MQ ++ ++ K
Sbjct: 449 INKWNLEDDEDEEDANKKNIQMEKPTEDDDVDPLDAYMQELNNQVSAGPETTKKDTKITK 508
Query: 46 VNKPAVPTTADVKPA--DSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQ 103
++ ++ T+ D A D KP + V+K+ +GELME N D LEYSSEEE
Sbjct: 509 QSEMSLKTSKDTDHASSDPSVKPKQQL----VIKRKRIIGRGELMESNIDELEYSSEEED 564
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+ A L K K L +DHS IEY PFRK+FYVEVPE+A+M+ E+V+ Y+
Sbjct: 565 TTIEDALAQLQKKDK--LQPIDHSKIEYFPFRKNFYVEVPELAKMSKEDVKAYR 616
>gi|405962641|gb|EKC28298.1| Putative ATP-dependent RNA helicase DDX46 [Crassostrea gigas]
Length = 913
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 107/159 (67%), Gaps = 13/159 (8%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPAD 61
KKW+LED+ D+DE + ++++ + +E +DPLDA+MQ + E++ +K KP
Sbjct: 84 KKWSLEDEDDDDEEEVQEKSEENGDE-VDPLDAYMQDITSEVKPKDKE--------KPNG 134
Query: 62 SGSKPAG-VVIVTGVVKKSV--EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQK 118
G + G V I+T V +K V EK KGELME N D +EYSSEEE+EDL ST N+ +K+K
Sbjct: 135 EGLQSTGKVTIITAVARKKVQPEKDKGELMENNVDLMEYSSEEEEEDLESTMLNM-NKKK 193
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K+ V+H I Y FRK+FYVEVPEIARMT EEVE Y+
Sbjct: 194 KDTIVVNHDKIYYASFRKNFYVEVPEIARMTTEEVEAYR 232
>gi|391337071|ref|XP_003742897.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Metaseiulus occidentalis]
Length = 1005
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 98/160 (61%), Gaps = 12/160 (7%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPAD 61
K N++D D ++D++ + + ++IDPLDAFM+G+ +++++V++ A P+ P
Sbjct: 167 KSTNVKDKPDTIKDDSEQRMEQGSGDEIDPLDAFMEGIVKQVKRVSR-AAPSI----PVS 221
Query: 62 SGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEE----QEDLTSTAANLASKQ 117
+ S A V + +S AKGE+ME+NQDGLEYS EEE Q+ + S ++ K
Sbjct: 222 TASSNAAVPKAKKL--RSKNGAKGEVMEQNQDGLEYSDEEEEEDLQQAMDSYSSATLGKI 279
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
KK+ + + I + PFRKDFY+EVPE+ +MT EVE +
Sbjct: 280 KKQ-TTISLEDITFKPFRKDFYIEVPELHQMTAAEVEALR 318
>gi|313241110|emb|CBY33407.1| unnamed protein product [Oikopleura dioica]
Length = 847
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 12/158 (7%)
Query: 4 WNLEDDSDEDENDNKDENGKTAE------EDIDPLDAFMQGVHEEMRKVNKPAVPTTADV 57
W + +SDE+ D + + KT E ED DPLDA+M + + M K + +
Sbjct: 174 WVEDGESDEEAEDVQSQVKKTDEDKMQEDEDEDPLDAYMSNLKDSM---GKNSGIVMEEK 230
Query: 58 KPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQ 117
K A+S K + VV V K +G+L+E NQD EYSSEEE E L T + KQ
Sbjct: 231 KSAES--KVSHVVASRVVAVKPKGSGRGDLIEANQDEPEYSSEEEDETLGDTLVSWTQKQ 288
Query: 118 KKEL-SKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
+K L K+DH I Y PF+K FY EVP IA++T +EV+
Sbjct: 289 RKLLEHKIDHGQINYEPFKKTFYTEVPSIAKLTTQEVK 326
>gi|313238875|emb|CBY13871.1| unnamed protein product [Oikopleura dioica]
Length = 1036
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 12/158 (7%)
Query: 4 WNLEDDSDEDENDNKDENGKTAE------EDIDPLDAFMQGVHEEMRKVNKPAVPTTADV 57
W + +SDE+ D + + KT E ED DPLDA+M + + M K + +
Sbjct: 198 WVEDGESDEEAEDVQSQVKKTDEDKMQEDEDEDPLDAYMSNLKDSM---GKNSGIVMEEK 254
Query: 58 KPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQ 117
K A+S K + VV V K +G+L+E NQD EYSSEEE E L T + KQ
Sbjct: 255 KSAES--KVSHVVASRVVAVKPKGSGRGDLIEANQDEPEYSSEEEDETLGDTLVSWTQKQ 312
Query: 118 KKEL-SKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
+K L K+DH I Y PF+K FY EVP IA++T +EV+
Sbjct: 313 RKLLEHKIDHGQINYEPFKKTFYTEVPSIAKLTTQEVK 350
>gi|221105444|ref|XP_002161749.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Hydra
magnipapillata]
Length = 1335
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 86/130 (66%), Gaps = 8/130 (6%)
Query: 31 PLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVE-KAKGELME 89
PLDA+M+ + +++ KV T +K + S V++V V+KK+ K K E++E
Sbjct: 533 PLDAYMKSIDKQVGKV------TAKKIKKSVQRSVAETVMVVKTVIKKTENVKVKPEVIE 586
Query: 90 ENQDGLEYSSEEEQE-DLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
+NQD LEYSSEEE+ D+T+ + K+KKEL+ DH+ I Y PFR+ FYVEVPE+A+M
Sbjct: 587 QNQDALEYSSEEEESLDVTAGDFSEVRKKKKELTVADHTKIYYPPFRRAFYVEVPELAKM 646
Query: 149 TPEEVEKYKE 158
T EEV+ Y+E
Sbjct: 647 TQEEVKLYRE 656
>gi|443729238|gb|ELU15222.1| hypothetical protein CAPTEDRAFT_167508 [Capitella teleta]
Length = 1000
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 86/131 (65%), Gaps = 10/131 (7%)
Query: 24 TAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK-SVEK 82
TAEE +DPLDA+MQ V E+ K V V+ + S V I+T V KK + K
Sbjct: 195 TAEE-VDPLDAYMQEVTTEV--TTKKCV-----VENSSSNGNKGKVTIITAVAKKKNPIK 246
Query: 83 AKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEV 142
KGELM +N D LEYSSEEE+EDL T ++ +K+KKEL++VDH I Y PFRK FYVEV
Sbjct: 247 QKGELMIDNADALEYSSEEEEEDLEETMRSM-NKKKKELNQVDHDKIYYRPFRKCFYVEV 305
Query: 143 PEIARMTPEEV 153
PEIA + PEEV
Sbjct: 306 PEIANLPPEEV 316
>gi|340378427|ref|XP_003387729.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Amphimedon queenslandica]
Length = 1111
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 74/151 (49%), Gaps = 41/151 (27%)
Query: 29 IDPLDAFMQGVHEEMRKVNK-------------------PAVPTTADVKPADSGSKPAGV 69
+DPLDAFM V +E+ KVN+ V V+P D+G K
Sbjct: 287 VDPLDAFMVDVKQEVIKVNENFKQKYNKGAGDGVEKATVVTVTKVKGVEPTDAGKK---- 342
Query: 70 VIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQED--LTSTAANLASK-QKKELSKVDH 126
GEL+E +QD EYS EEE D S + + K +KK+L VDH
Sbjct: 343 ---------------GELLENDQDAAEYSDEEEGHDAEFASALSTIFKKTKKKDLPTVDH 387
Query: 127 STIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
IEY PFRKDFY EVP ++RMT EEV Y+
Sbjct: 388 RKIEYPPFRKDFYKEVPVLSRMTEEEVSMYR 418
>gi|339238901|ref|XP_003381005.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316976022|gb|EFV59375.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 964
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 22/130 (16%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSK-PAGVVIVTGVVKKSVEKAKGELM 88
DPLD FMQ VH+++R+ + PT A +GSK + VV+VT
Sbjct: 171 DPLDVFMQEVHQQIRQ-TRGIDPTAA----GGAGSKGQSKVVLVT--------------- 210
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
++N D LEYS EE+ D+ ++LA+ Q K+L +H + Y FRK+FYVEV ++A+M
Sbjct: 211 KQNADALEYSDEEQDVDIEQAISSLAA-QAKQLPITNHDKVYYRAFRKNFYVEVADLAKM 269
Query: 149 TPEEVEKYKE 158
+ EEV+ Y+E
Sbjct: 270 SQEEVDAYRE 279
>gi|395817878|ref|XP_003804109.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46 [Otolemur garnettii]
Length = 941
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 39/158 (24%)
Query: 2 KKWNLEDDSDEDENDNKD--ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW+LEDD D++++ + E + E++DPLDA+M+ V EE++K N
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGSEMEGEELDPLDAYMEEVKEEVKKFNM----------- 244
Query: 60 ADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK 119
+SV+ G N+ +YSSEEE+ DL + +KQ+K
Sbjct: 245 ------------------RSVKGGGG-----NE---KYSSEEEEVDLQTALTGYQTKQRK 278
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
L VDH IEY PFRK+FYVEVPE+A+M+ EEV ++
Sbjct: 279 LLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFR 316
>gi|224065635|ref|XP_002301895.1| predicted protein [Populus trichocarpa]
gi|222843621|gb|EEE81168.1| predicted protein [Populus trichocarpa]
Length = 1112
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 90/169 (53%), Gaps = 17/169 (10%)
Query: 2 KKWNLEDDSDEDE---------NDNKDENGKTAEEDIDPLDAFMQG-VHEEMRKVNKPAV 51
K W LE +SD++E + + +EN K EE+IDPLDAFM V E+ K+N V
Sbjct: 283 KTWTLEGESDDEEAPPTGKSETDMDLEENAKPDEEEIDPLDAFMNSMVLPEVEKLNSTLV 342
Query: 52 PTTADVKPADSGSKPAGVVIVTG-VVKKSVEKAKGELME-ENQDG----LEYSSEEEQED 105
TAD D +K + G KK K+ G ++ E+ D LE + +E+
Sbjct: 343 THTADDNKTDLKNKDKKEERINGEQRKKGSHKSLGRIVPGEDSDSDYGDLENGEDPLEEE 402
Query: 106 LTSTAANLASKQKKE-LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
K K E LS VDHS I+Y PFRK+FY+EV EI+RMTPEEV
Sbjct: 403 DDDEFMKRVKKTKAEKLSIVDHSKIDYNPFRKNFYIEVKEISRMTPEEV 451
>gi|440794934|gb|ELR16079.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 972
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 27/150 (18%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGV---------- 75
E+D+DPLDA+M G+ +E+RK+ V + +K A S S+ IVT V
Sbjct: 97 EDDVDPLDAYMTGIQQEVRKL----VTVSTVLKDAGSASRK----IVTRVEGVAPAASAP 148
Query: 76 ----VKKSVEKAKGELM---EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHST 128
K+ V GE +E+QD E ++ E+E ++ A+K+K+E+ VDHS
Sbjct: 149 AVQQNKQQVRSKLGERFYADDEDQDWSELAAPVEEE--SALDKAAAAKKKREIPVVDHSK 206
Query: 129 IEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
I Y+PFRKD Y+EVPE+ +MT E+V +Y+
Sbjct: 207 IAYIPFRKDLYIEVPELKKMTKEDVVQYRR 236
>gi|224083374|ref|XP_002307002.1| predicted protein [Populus trichocarpa]
gi|222856451|gb|EEE93998.1| predicted protein [Populus trichocarpa]
Length = 895
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 25 AEEDIDPLDAFMQG-VHEEMRKVNKPAVPTTADVKPADSGSKPAG-VVIVTGVVKKSVEK 82
+E+IDPLDAFM V E+ +N V TAD ADS K I G KK K
Sbjct: 98 GDEEIDPLDAFMNSMVLPEVEMLNNAVVTQTADDNKADSKKKDKNDEGINGGQRKKGSHK 157
Query: 83 AKGELM-----EENQDGLEYSS-EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRK 136
+ G ++ + + LE S E ED + + ++LS VDHS I+Y PFRK
Sbjct: 158 SLGRIIPGEDSDSDHGDLENSEVPLEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYSPFRK 217
Query: 137 DFYVEVPEIARMTPEEVEKYKEV 159
+FY+EV EI RMTPEEV Y+++
Sbjct: 218 NFYIEVKEILRMTPEEVTAYRKL 240
>gi|156389356|ref|XP_001634957.1| predicted protein [Nematostella vectensis]
gi|156222046|gb|EDO42894.1| predicted protein [Nematostella vectensis]
Length = 794
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 67/94 (71%), Gaps = 6/94 (6%)
Query: 70 VIVTGVVKKS--VEKA--KGELMEENQDGLEYSSEEEQEDLTS--TAANLASKQKKELSK 123
VI VVKK EK+ KGELME + D +EYSSEEE+E+ T A +K+KKEL
Sbjct: 26 VITHVVVKKPEVTEKSEKKGELMEGDIDAMEYSSEEEKEEEDLESTYAGYKTKKKKELQP 85
Query: 124 VDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
VDH T+ Y PFRKDFYVEVPE+A+MTPEE ++++
Sbjct: 86 VDHKTVVYQPFRKDFYVEVPELAKMTPEETDEFR 119
>gi|449525702|ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
42-like [Cucumis sativus]
Length = 1098
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 21 NGKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPTTAD-----VKPADSGSKPAGVVIVTG 74
G A+++IDPLDAFM V E+ K+NK VPT D +K D S +G
Sbjct: 311 GGDAADDEIDPLDAFMNSMVLPEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRR 370
Query: 75 VVKKSVEKA-KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE-LSKVDHSTIEYL 132
+ KS+ + GE + + LE + +++ K K E LS VDHS ++Y
Sbjct: 371 ISNKSMGRIIPGEDSDTDYGDLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQ 430
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYK 157
PFRK+FY+EV EI+RMT EEV Y+
Sbjct: 431 PFRKNFYIEVKEISRMTLEEVAAYR 455
>gi|449439147|ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
[Cucumis sativus]
Length = 1118
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 21 NGKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPTTAD-----VKPADSGSKPAGVVIVTG 74
G A+++IDPLDAFM V E+ K+NK VPT D +K D S +G
Sbjct: 311 GGDAADDEIDPLDAFMNSMVLPEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRR 370
Query: 75 VVKKSVEKA-KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE-LSKVDHSTIEYL 132
+ KS+ + GE + + LE + +++ K K E LS VDHS ++Y
Sbjct: 371 ISNKSMGRIIPGEDSDTDYGDLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQ 430
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYK 157
PFRK+FY+EV EI+RMT EEV Y+
Sbjct: 431 PFRKNFYIEVKEISRMTLEEVAAYR 455
>gi|449439149|ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
[Cucumis sativus]
Length = 1040
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 8/146 (5%)
Query: 21 NGKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPTTAD-----VKPADSGSKPAGVVIVTG 74
G A+++IDPLDAFM V E+ K+NK VPT D +K D S +G
Sbjct: 233 GGDAADDEIDPLDAFMNSMVLPEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRR 292
Query: 75 VVKKSVEKA-KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE-LSKVDHSTIEYL 132
+ KS+ + GE + + LE + +++ K K E LS VDHS ++Y
Sbjct: 293 ISNKSMGRIIPGEDSDTDYGDLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQ 352
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYKE 158
PFRK+FY+EV EI+RMT EEV Y++
Sbjct: 353 PFRKNFYIEVKEISRMTLEEVAAYRK 378
>gi|357445503|ref|XP_003593029.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
gi|355482077|gb|AES63280.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
Length = 1148
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 14/147 (9%)
Query: 22 GKTAEEDIDPLDAFMQG-VHEEMRKVNKP---AVPTTA-DVKPADSGSKPAGVVIVTGVV 76
G AE++IDPLDAFM V E+ K+N A P A D+ P D G++ G
Sbjct: 375 GAPAEDEIDPLDAFMNSMVLPEVEKLNNAVNSAPPDKASDLNPKDKGAESRN----GGQS 430
Query: 77 KKSVEKAKGELMEENQDGLEYSSEEEQ-----EDLTSTAANLASKQKKELSKVDHSTIEY 131
+K K+ G ++ + +Y+ E + ED + + ++LS VDHS I+Y
Sbjct: 431 RKGSNKSIGRIIPGEESDSDYADPEVEGDPLDEDDDEFMKRVKKTKAEKLSIVDHSKIDY 490
Query: 132 LPFRKDFYVEVPEIARMTPEEVEKYKE 158
+PFRK+FY+EV E+++MT EEV Y++
Sbjct: 491 IPFRKNFYIEVKEVSKMTVEEVAFYRK 517
>gi|324502742|gb|ADY41204.1| ATP-dependent RNA helicase DDX46 [Ascaris suum]
Length = 973
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 94/168 (55%), Gaps = 32/168 (19%)
Query: 2 KKWNLEDDSDEDE-----NDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTAD 56
+KW L+++ D+DE E K E++IDPLDA+M V++E+R A +D
Sbjct: 151 RKWTLDNEEDDDEIPPTEQTEIKEEKKEEEDEIDPLDAYMSEVNKEVR-----ATKYGSD 205
Query: 57 VKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQE------DLTSTA 110
+G A +V++ + +E KGE++E +E+E E D+ A
Sbjct: 206 ----QAGESKARIVVIK--TETGIEPNKGEIIE---------AEDEMEQVVDDFDIEKAA 250
Query: 111 ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
++L ++ ++L + DHS + Y PFRKDFYVE E+A+MT +EV++Y+E
Sbjct: 251 SSLIAR-GRQLPQTDHSKVYYRPFRKDFYVETAELAKMTKKEVDQYRE 297
>gi|356497367|ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
max]
Length = 1104
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 22 GKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPTTAD----VKPADSGSKPAGVVIVTGVV 76
G +E+IDPLDAFM V E+ K+N + +D VKP D G+
Sbjct: 326 GAPEDEEIDPLDAFMNSMVLPEVEKLNNAVTSSLSDKAIDVKPKDKGNGQN----RGAQS 381
Query: 77 KKSVEKAKGELMEENQDGLEYSSEEEQED-LTSTAANLASKQKK----ELSKVDHSTIEY 131
+K K+ G ++ + +Y+ +E ++D L + KK +LS VDHS I+Y
Sbjct: 382 RKGSNKSIGRIIPGEESDSDYADDEVEKDPLDEDDDEFMKRVKKTKAEKLSLVDHSKIDY 441
Query: 132 LPFRKDFYVEVPEIARMTPEEVEKYK 157
PF+K+FY+EV EI++MTPEE Y+
Sbjct: 442 EPFKKNFYIEVKEISKMTPEEAAVYR 467
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 71/144 (49%), Gaps = 29/144 (20%)
Query: 17 NKDENGKTAEEDIDPLDAFMQG-VHEEMRKVNKPAV-PTTADVKPADSGSKPAGVVIVTG 74
N DE G +E+IDPLDAFM V E+ K+N AV PT+ V P++ G
Sbjct: 365 NGDE-GADGDEEIDPLDAFMNSMVLPEVEKLNNAAVSPTSNAVVPSEDSDSDYG------ 417
Query: 75 VVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE-LSKVDHSTIEYLP 133
LE + + +E+ K K E LS VDHS I+Y P
Sbjct: 418 -------------------DLENNEDPLEEEDDDEFMKRVKKTKAERLSIVDHSKIDYKP 458
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
FRK+FY+EV E ARMTPEE+ Y+
Sbjct: 459 FRKNFYIEVKESARMTPEEIAAYR 482
>gi|15218071|ref|NP_173516.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA helicases [Arabidopsis thaliana]
gi|332191919|gb|AEE30040.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 1166
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 24/151 (15%)
Query: 21 NGKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPTTAD-------VKPADSGSKPAGVVIV 72
+G EE+IDPLDAFM V E+ K A P + + +SG +P
Sbjct: 372 DGAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRP------ 425
Query: 73 TGVVKKSVEKAKGELMEENQDGLEYS--SEEEQEDLTSTAANLASKQKK----ELSKVDH 126
KK KA G +++ +YS ++ L + KK +LS VDH
Sbjct: 426 ----KKGFNKALGRIIQGEDSDSDYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDH 481
Query: 127 STIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
S IEY PFRK+FY+EV +I+RMT EEV Y+
Sbjct: 482 SKIEYEPFRKNFYIEVKDISRMTQEEVNTYR 512
>gi|145323964|ref|NP_001077571.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|332191920|gb|AEE30041.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 828
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 75/152 (49%), Gaps = 24/152 (15%)
Query: 21 NGKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPTTAD-------VKPADSGSKPAGVVIV 72
+G EE+IDPLDAFM V E+ K A P + + +SG +P
Sbjct: 34 DGAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRP------ 87
Query: 73 TGVVKKSVEKAKGELMEENQDGLEYS--SEEEQEDLTSTAANLASKQKK----ELSKVDH 126
KK KA G +++ +YS ++ L + KK +LS VDH
Sbjct: 88 ----KKGFNKALGRIIQGEDSDSDYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDH 143
Query: 127 STIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
S IEY PFRK+FY+EV +I+RMT EEV Y++
Sbjct: 144 SKIEYEPFRKNFYIEVKDISRMTQEEVNTYRK 175
>gi|242080401|ref|XP_002444969.1| hypothetical protein SORBIDRAFT_07g002100 [Sorghum bicolor]
gi|241941319|gb|EES14464.1| hypothetical protein SORBIDRAFT_07g002100 [Sorghum bicolor]
Length = 946
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 42/184 (22%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTA-------------------EEDIDPLDAFMQGVHEE 42
KKW LE + ++E D D G + EE+IDPLDAFM
Sbjct: 179 KKWTLEGEDSDEEADGTDLGGSSVMDVDFNNGGNATSGPTDADEEEIDPLDAFM------ 232
Query: 43 MRKVNKPAVPTTADVK--PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEY--- 97
N +P A ++ A S PA V KK ++K G +M+ + +Y
Sbjct: 233 ----NTMVLPEVAMLERNAASVDSVPAS----NAVAKKGLKKGTGRIMQGDDSDSDYEDV 284
Query: 98 ----SSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
+ E ED + + ++L VDHS I+Y PF+K+FY+E +I MT EEV
Sbjct: 285 GDDVGAGLEDEDDEEFMKRVKKTKMEKLGVVDHSKIDYQPFQKNFYIEAKDIREMTSEEV 344
Query: 154 EKYK 157
Y+
Sbjct: 345 AVYR 348
>gi|255578793|ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1173
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 26 EEDIDPLDAFMQG-VHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
+E+IDPLDAFM V E+ K+N + T D + K +KK K+
Sbjct: 373 DEEIDPLDAFMNSMVLPEVEKLNNAVITETVDENKVELKKKKEEGNEGE-KLKKGSNKSL 431
Query: 85 GELMEENQDGLEYSSEE------EQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
G ++ +Y E + ED + + ++LS VDHS I+Y PFRK+F
Sbjct: 432 GRIIPGEDSDSDYGDLENDEGPLDDEDDDEFMKRVKKTKAEKLSVVDHSKIDYKPFRKNF 491
Query: 139 YVEVPEIARMTPEEVEKYK 157
Y+EV EI+RM PEEV Y+
Sbjct: 492 YIEVKEISRMAPEEVAAYR 510
>gi|356538821|ref|XP_003537899.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
max]
Length = 1107
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 22 GKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPTTA----DVKPADSGSKPAGVVIVTGVV 76
G +E+IDPLDAFM V E+ K+N + + DVKP D G++ V
Sbjct: 329 GAPEDEEIDPLDAFMNSMVLPEVEKLNNAVTSSLSGKAIDVKPKDKGNEQNRGAQSRKVS 388
Query: 77 KKSVEKAKGELMEENQDGLEYSSEEEQED-LTSTAANLASKQKK----ELSKVDHSTIEY 131
KS+ G ++ + +Y+ +E ++D L + KK +LS VDHS I Y
Sbjct: 389 NKSI----GRIIPGEESDSDYADDEVEKDPLDEDDDEFMKRVKKTKAEKLSLVDHSKIVY 444
Query: 132 LPFRKDFYVEVPEIARMTPEEVEKYK 157
PF+K+FY+EV E+++MTPEE Y+
Sbjct: 445 EPFKKNFYIEVKEVSKMTPEESAVYR 470
>gi|326426645|gb|EGD72215.1| DEAD box ATP-dependent RNA helicase [Salpingoeca sp. ATCC 50818]
Length = 1054
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME 89
DPLDAFMQ V E+ K+ D K + + G++ +S +GE +
Sbjct: 181 DPLDAFMQSVDTEVTKIK------AQDAKRMRTHK-------MLGILGQS---KRGEKIS 224
Query: 90 ENQDGLEYS----SEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+ +G +Y EEEQ + KQ +EL DH+ IEY FRK FYVEVPEI
Sbjct: 225 DANEGFDYPLSDEEEEEQAGQPKYWSGYTPKQPRELGVPDHAKIEYEDFRKSFYVEVPEI 284
Query: 146 ARMTPEEVEKYK-EVDN 161
RM+ +EV + + E++N
Sbjct: 285 KRMSDQEVAQLRFELEN 301
>gi|198435916|ref|XP_002130991.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
[Ciona intestinalis]
Length = 1150
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 74/132 (56%), Gaps = 17/132 (12%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVE-KAKGELM 88
DPLDAFM + + NK S V +T V KS + K KGELM
Sbjct: 354 DPLDAFMMDLTQNKNDTNK-------------SEKDGPQVSRITSVASKSNKGKVKGELM 400
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLAS--KQKKEL-SKVDHSTIEYLPFRKDFYVEVPEI 145
E N D +EYSSEEE+E L S + + +Q K+L + +DHS I Y FRK+FYVEVPE+
Sbjct: 401 EGNMDAMEYSSEEEEESLDSAFSKFQTNRQQPKKLETTIDHSKIPYENFRKNFYVEVPEL 460
Query: 146 ARMTPEEVEKYK 157
A +T E+VE +
Sbjct: 461 AALTTEQVEAMR 472
>gi|242080665|ref|XP_002445101.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
gi|241941451|gb|EES14596.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
Length = 1062
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 34/191 (17%)
Query: 2 KKWNLEDDSDEDENDNKD-----ENGKTA--------------------EEDIDPLDAFM 36
KKW L+ + ++E D +D ENG E++IDPLDAFM
Sbjct: 231 KKWTLDGEESDEEGDKEDGKKDEENGGAGDMDVDLPNGDGDANGGAGMEEDEIDPLDAFM 290
Query: 37 QG-VHEEMRKVNKPAVP--TTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME--EN 91
V E+ K+ A TTA AD + + +V+ KK KA G +M+ ++
Sbjct: 291 NSMVLPEVAKLESAAAAMDTTAPGAGADDKNGKSSKDVVSNGDKKGSRKAIGRIMQGDDS 350
Query: 92 QDGLEYSSEEEQEDLTSTAANLASKQKK----ELSKVDHSTIEYLPFRKDFYVEVPEIAR 147
+ + + ++ + + KK +L+ VDHS I+Y PFRK+FY+EV +I++
Sbjct: 351 ESDYDDADDDGAGEDDEDDEEFIKRVKKTKAEKLAIVDHSKIDYQPFRKNFYIEVKDISK 410
Query: 148 MTPEEVEKYKE 158
MT EEV +Y++
Sbjct: 411 MTSEEVVEYRK 421
>gi|413917331|gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 1065
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 15 NDNKDENG--KTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPT-TADVKPADSGSKPAGVV 70
+ N D NG + E++IDPLDAFM V E+ K+ AV TA AD + +
Sbjct: 271 SGNGDANGGAEMEEDEIDPLDAFMNSMVLPEVAKLESAAVAMDTAPAAGADGKNGKSSKD 330
Query: 71 IVTGVVKKSVEKAKGELME--ENQDGLEYSSEEEQEDLTSTAANLASKQKK----ELSKV 124
+++ KK KA G +M+ ++ + + ++ + + KK +L+ V
Sbjct: 331 VISNGDKKGSRKATGRIMQGDDSDSDYDDADDDGAGEDDEDDEEFIKRVKKTKAEKLAIV 390
Query: 125 DHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
DHS I+Y PFRK+FY+EV +I +MT EEV Y++
Sbjct: 391 DHSKIDYQPFRKNFYIEVKDITKMTSEEVVDYRK 424
>gi|308453523|ref|XP_003089473.1| hypothetical protein CRE_13197 [Caenorhabditis remanei]
gi|308240199|gb|EFO84151.1| hypothetical protein CRE_13197 [Caenorhabditis remanei]
Length = 514
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 18/128 (14%)
Query: 31 PLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEE 90
PLDAFM + ++ K K +SG K +GVV + + ++ EK KG+L+E
Sbjct: 189 PLDAFMAEISKKNAK------------KSGNSGQKSSGVVTI--IQEEKPEKEKGQLLE- 233
Query: 91 NQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTP 150
N+D ++ ++ D+ + AA+L K + L+ DHS + Y F+K+FY+E EI RM+
Sbjct: 234 NEDNMDMVIDDF--DIETAAASLCHKGRM-LAATDHSKVYYRKFKKNFYIETEEIKRMSK 290
Query: 151 EEVEKYKE 158
EV+ Y++
Sbjct: 291 AEVKAYRD 298
>gi|297845068|ref|XP_002890415.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
gi|297336257|gb|EFH66674.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
Length = 827
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 21 NGKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPTTAD-------VKPADSGSKPAGVVIV 72
+G EE+IDPLDAFM V E+ K++ A P + + +S +P
Sbjct: 34 DGAADEEEIDPLDAFMNTMVLPEVEKLSNGAPPPAVNDGILDSKMNGKESDDQP------ 87
Query: 73 TGVVKKSVEKAKGELMEENQDGLEYS--SEEEQEDLTSTAANLASKQKK----ELSKVDH 126
KK KA G +++ +YS ++ L + KK +LS VDH
Sbjct: 88 ----KKGFNKALGRIIQGEDSDSDYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDH 143
Query: 127 STIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
S IEY PFRK+FY+EV +I+RMT EEV Y++
Sbjct: 144 SKIEYEPFRKNFYIEVKDISRMTQEEVNTYRK 175
>gi|396462816|ref|XP_003836019.1| hypothetical protein LEMA_P053600.1 [Leptosphaeria maculans JN3]
gi|312212571|emb|CBX92654.1| hypothetical protein LEMA_P053600.1 [Leptosphaeria maculans JN3]
Length = 1194
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 65/135 (48%), Gaps = 38/135 (28%)
Query: 19 DENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK 78
D+ G ED+DPLDA+M AD+ A G PAG
Sbjct: 421 DDAGAEEAEDVDPLDAYM------------------ADLNDAQPG--PAG---------- 450
Query: 79 SVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
GE M N D + E EDL + A A K+KKE+ VDH+ +EY PFRKDF
Sbjct: 451 -----PGEPMF-NDDLEPEQTSVEAEDLLALRA--ARKKKKEVPIVDHAKVEYEPFRKDF 502
Query: 139 YVEVPEIARMTPEEV 153
Y E EI++MTPEEV
Sbjct: 503 YTEPAEISQMTPEEV 517
>gi|341900203|gb|EGT56138.1| hypothetical protein CAEBREN_02977 [Caenorhabditis brenneri]
Length = 982
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 18/129 (13%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME 89
DPLDAFM+G+ + K K A + K +G IVT V ++ E KG+L+E
Sbjct: 187 DPLDAFMKGISAQNAK------------KAAQNVPKKSG--IVTIVQEEKPEPEKGQLLE 232
Query: 90 ENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMT 149
N+D ++ ++ D+ + AA+L K + L+ DHS + Y F+K+FY+E EI +MT
Sbjct: 233 -NEDNMDIVIDDF--DIETAAASLCHKGRM-LAATDHSKVYYRKFKKNFYIETEEIKKMT 288
Query: 150 PEEVEKYKE 158
EV+ Y+E
Sbjct: 289 KAEVKAYRE 297
>gi|25395997|pir||H88637 protein F53H1.1 [imported] - Caenorhabditis elegans
Length = 646
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 32/171 (18%)
Query: 2 KKWNLEDDSDEDENDNKDE-----NGKTAEEDI---------DPLDAFMQGVHEEMRKVN 47
K WNLED+ DEDE D K+E N EE + DPLDAFM+
Sbjct: 135 KPWNLEDEDDEDEFDIKNEGISEENPVKMEEKVEKMDTDDEEDPLDAFMK---------- 184
Query: 48 KPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLT 107
+ T K +S K +G IVT V ++ E KG+++E N+D ++ ++ D+
Sbjct: 185 --EIATKNAKKTGNSTQKASG--IVTIVQEEKPEPEKGQVLE-NEDNMDMVIDDF--DIE 237
Query: 108 STAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ AA+L K + L++ DHS + Y F+K+FY+E EI RMT EV+ Y+E
Sbjct: 238 TAAASLCHKGRM-LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYRE 287
>gi|402591636|gb|EJW85565.1| DEAD box RNA helicase [Wuchereria bancrofti]
Length = 952
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 94/159 (59%), Gaps = 17/159 (10%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEED--IDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW L+++ +++E+ ++ K +E+D +DPLDAFM V++E+R + ++
Sbjct: 133 KKWTLDNEEEDEESTPQEIEKKESEDDDEVDPLDAFMSEVNKEVR-------ASKYGLEQ 185
Query: 60 ADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK 119
+ G A +V++ ++E KGE++E + + D+ A++L +K +
Sbjct: 186 NNEGK--ARIVVIKS--DANLEPKKGEIIEAEDEIEPVIDDF---DIEKAASSLIAK-GR 237
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+L + DHS + Y PFRK+FYVE E+A++T +EV++Y+E
Sbjct: 238 QLPQTDHSKVYYRPFRKNFYVETAELAKITKKEVDEYRE 276
>gi|86570094|ref|NP_001033411.1| Protein F53H1.1 [Caenorhabditis elegans]
gi|351063534|emb|CCD71734.1| Protein F53H1.1 [Caenorhabditis elegans]
Length = 970
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 32/171 (18%)
Query: 2 KKWNLEDDSDEDENDNKDE-----NGKTAEEDI---------DPLDAFMQGVHEEMRKVN 47
K WNLED+ DEDE D K+E N EE + DPLDAFM+
Sbjct: 135 KPWNLEDEDDEDEFDIKNEGISEENPVKMEEKVEKMDTDDEEDPLDAFMK---------- 184
Query: 48 KPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLT 107
+ T K +S K +G IVT V ++ E KG+++E N+D ++ ++ D+
Sbjct: 185 --EIATKNAKKTGNSTQKASG--IVTIVQEEKPEPEKGQVLE-NEDNMDMVIDDF--DIE 237
Query: 108 STAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ AA+L K + L++ DHS + Y F+K+FY+E EI RMT EV+ Y+E
Sbjct: 238 TAAASLCHKGRM-LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYRE 287
>gi|224064557|ref|XP_002301515.1| predicted protein [Populus trichocarpa]
gi|222843241|gb|EEE80788.1| predicted protein [Populus trichocarpa]
Length = 807
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 8 DDSDEDENDNKDE----NGKTAEEDIDPLDAFMQGVHEEMR---------KVNKPAVPTT 54
D+ D D+ND E NG AE IDPLDAFM+G+HEEMR KV +
Sbjct: 49 DNIDYDDNDAAKESAENNGSAAE--IDPLDAFMEGIHEEMRAAPPPKAKEKVERYKDDDD 106
Query: 55 ADVKPADS---GSKPAGVVIVTGVVKKSV---EKAKGELMEENQDGLEYSSEEEQEDLTS 108
+ P +S K G+ + ++ E+ + LEY S++
Sbjct: 107 EEDDPMESFLRAKKDLGLTLAADALRAGYDSDEEVYAAAKAVDAGMLEYDSDDNPV---- 162
Query: 109 TAANLASKQKKE-LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKY 156
+ K+K E + +DH +IEY PF KDFY E P I+ M+ ++V +Y
Sbjct: 163 ----VVDKKKIEPIQALDHGSIEYEPFSKDFYEESPSISEMSEQDVAEY 207
>gi|312066551|ref|XP_003136324.1| RNA helicase [Loa loa]
gi|307768519|gb|EFO27753.1| RNA helicase [Loa loa]
Length = 952
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 92/158 (58%), Gaps = 16/158 (10%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEED-IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
KKW L+++ +++E+ ++ K +++D IDPLDAFM V++E+R +K + + K
Sbjct: 134 KKWTLDNEEEDEESTPQEIEKKESDDDEIDPLDAFMSEVNKEVR-ASKYGLEQNNEGK-- 190
Query: 61 DSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE 120
V IV ++E KGE++E + + D+ A++L +K ++
Sbjct: 191 --------VRIVVIKSDANLEPKKGEIIEAEDEIEPVIDDF---DIEKAASSLIAK-GRQ 238
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
L + DHS + Y PFRK+FYVE E+A++T +EV++Y+E
Sbjct: 239 LPQTDHSKVYYRPFRKNFYVETAELAKITKKEVDEYRE 276
>gi|390601156|gb|EIN10550.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 966
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 29/137 (21%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E+++DPLDAFM G+ EE++KVN+ D+K A G+ P+ ++++
Sbjct: 165 EDEVDPLDAFMTGIKEEVKKVNE------EDIKKA--GAAPS-------------QQSRV 203
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAAN--------LASKQKKELSKVDHSTIEYLPFRKD 137
L + +D +E +E Q++L T N +KK+L+ VDHS ++Y PFRK+
Sbjct: 204 RLDDGTEDNVEDFAEGVQDELDQTELNPEDILALAAKKAKKKDLATVDHSRVQYEPFRKE 263
Query: 138 FYVEVPEIARMTPEEVE 154
FY+ P+IA MT E+ E
Sbjct: 264 FYIAPPDIAAMTDEDAE 280
>gi|255548421|ref|XP_002515267.1| hypothetical protein RCOM_1346600 [Ricinus communis]
gi|223545747|gb|EEF47251.1| hypothetical protein RCOM_1346600 [Ricinus communis]
Length = 791
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 22/165 (13%)
Query: 8 DDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--------DVKP 59
D ++E+EN K+ NG ++IDPLDAFM+G+HEEM+ P A D P
Sbjct: 52 DYAEENEN-AKESNGAEENDEIDPLDAFMEGIHEEMKAAPPPKAKDKAEKYRDDEDDNDP 110
Query: 60 ADS---GSKPAGVVIVTGVVKK---SVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANL 113
+S K G+ + + S E+ + LEY S++ L
Sbjct: 111 MESFLKAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGLLEYDSDD-------NPVVL 163
Query: 114 ASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
K+ + + +DHS I+Y PF KDFY E P I+ M+ ++V +Y++
Sbjct: 164 DRKKIEPIPPLDHSLIDYEPFNKDFYEEKPSISGMSEQDVAEYRK 208
>gi|357130377|ref|XP_003566825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like
[Brachypodium distachyon]
Length = 1045
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 7 EDDSDEDENDNKDENGKTA--------EEDIDPLDAFMQG-VHEEMRKV-NKPAVPTTAD 56
E+ SD D NG A E+DIDPLDAFM V E+ K+ N A +A
Sbjct: 239 ENHSDTSAMDVNLPNGGNAANSGADMEEDDIDPLDAFMNSMVLPEVAKLENSTAFVGSAP 298
Query: 57 VKPADSGSKPAGVVIVTGVVKKSVEKAKGELME------ENQDGLEYSSEEEQEDLTSTA 110
+D + + + KK KA G +M+ + D + + ED
Sbjct: 299 AASSDDKNDKGMKDTTSNLDKKRPIKAMGRIMQGDDSDSDYDDADNDEAGSDDEDDAEFI 358
Query: 111 ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
+ + ++L VDHS I+Y PFRK+FY+EV +I RM+ E+V Y+++
Sbjct: 359 KRVKKTKAEKLVIVDHSKIDYQPFRKNFYIEVKDITRMSAEDVASYRKL 407
>gi|143456125|sp|Q0J7Y8.2|RH45_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 45
Length = 947
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 32/188 (17%)
Query: 2 KKWNL------EDDSDEDENDNKDENGKTA----------------EEDIDPLDAFMQG- 38
KKW L E+ ED + +D+ G TA E++IDPLDAFM
Sbjct: 83 KKWTLDGEESDEEGYKEDSQNAEDDGGITADLPSEVNDANVAAPMEEDEIDPLDAFMSSM 142
Query: 39 VHEEMRKVNKPAVPTTADVKPADSGSKPAGVV--IVTGVVKKSVEKAKGELMEENQDGLE 96
V E+ K+ + AV + + ++ G K V+ KK +KA G +M+ + +
Sbjct: 143 VLPEVAKL-ETAVASMESMPASNMGDKNGKSAKDAVSNGDKKGQKKAMGRIMQGDDSDSD 201
Query: 97 YSSEEEQ------EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTP 150
Y +++ ED + + ++L+ VDHS IEY PFRK+ Y+EV +I MT
Sbjct: 202 YDDDDDDEGGSKDEDDEEFMKRVKKTKVEKLAIVDHSKIEYQPFRKNLYIEVKDITMMTG 261
Query: 151 EEVEKYKE 158
EEV Y++
Sbjct: 262 EEVATYRK 269
>gi|324502886|gb|ADY41264.1| ATP-dependent RNA helicase DDX46 [Ascaris suum]
Length = 784
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 26/125 (20%)
Query: 43 MRKVNKPAVPTTADVKPADSGSKPAG---VVIVTGVVKKSVEKAKGELMEENQDGLEYSS 99
M +VNK +V+ GS AG IV + +E KGE++E +
Sbjct: 1 MSEVNK-------EVRATKYGSDQAGESKARIVVIKTETGIEPNKGEIIE---------A 44
Query: 100 EEEQE------DLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
E+E E D+ A++L ++ ++L + DHS + Y PFRKDFYVE E+A+MT +EV
Sbjct: 45 EDEMEQVVDDFDIEKAASSLIAR-GRQLPQTDHSKVYYRPFRKDFYVETAELAKMTKKEV 103
Query: 154 EKYKE 158
++Y+E
Sbjct: 104 DQYRE 108
>gi|168053931|ref|XP_001779387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669185|gb|EDQ55777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 29/172 (16%)
Query: 7 EDDSDEDEN-DNKDENGKTA-------EEDIDPLDAFMQGVHEEMRKVN---KPAV---- 51
EDD E EN N+DEN ++++DPLDAFM+G+HEE++K +P V
Sbjct: 54 EDDGRESENFRNRDENNNAGSGAVPDNDDEVDPLDAFMEGIHEEVKKAPVKPRPIVEELE 113
Query: 52 -----PTTADVKPA-DSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQED 105
P + +K D+G A + G A + ++ Q +EY S++
Sbjct: 114 DDEDDPMESFLKARRDAGLSLAAEALHAGYDTDEEVYAAAKAVDNGQ--IEYDSDD---- 167
Query: 106 LTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+ L K+ + L+ +DH+ ++Y F KDFY E I+ MT EEV Y+
Sbjct: 168 --NAIVTLEKKKIEALAPLDHNDVDYEKFSKDFYEESDSISGMTEEEVAAYR 217
>gi|440799028|gb|ELR20089.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 682
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 9 DSDEDENDNKDE-NGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPA 67
D+ E+ N+ K AE+++DPLDAFM+G+H+ ++K +KPA + + A
Sbjct: 54 DAKEEPNEEKQNVEAADAEDEVDPLDAFMEGIHDTVKK------EKAGIIKPAQTKALVA 107
Query: 68 GVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHS 127
+ + E E +G + ++ D K+ + L+ +DHS
Sbjct: 108 EFEEEDPLESFMKHMKEKEKEEREGNGDDVDDDDLDYDSDDNPLVERKKEIEALAPLDHS 167
Query: 128 TIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
I Y F++DFYVE E+ RMT EV Y+++
Sbjct: 168 QIHYESFKRDFYVEPEEVTRMTEAEVHDYRQM 199
>gi|330934418|ref|XP_003304540.1| hypothetical protein PTT_17169 [Pyrenophora teres f. teres 0-1]
gi|311318781|gb|EFQ87363.1| hypothetical protein PTT_17169 [Pyrenophora teres f. teres 0-1]
Length = 1166
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 39/136 (28%)
Query: 19 DENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK 78
D+N E+DIDPLDAFM + E N P+
Sbjct: 405 DQNAGAEEDDIDPLDAFMADLAEPQPTHNAPS---------------------------- 436
Query: 79 SVEKAKGELMEENQ-DGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKD 137
GE M ++ + +E S +E D+ A A K+KKE+ VDH +EY PFRK+
Sbjct: 437 ------GEAMFADELEPIEMSVADE--DINQLRA--AKKKKKEVITVDHEKVEYEPFRKN 486
Query: 138 FYVEVPEIARMTPEEV 153
FY E EI++M PEEV
Sbjct: 487 FYTEPAEISQMKPEEV 502
>gi|268573988|ref|XP_002641971.1| Hypothetical protein CBG16678 [Caenorhabditis briggsae]
Length = 972
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 18/133 (13%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
++D DPL+A+M + + K +K V + IVT + ++ EK KG
Sbjct: 176 DDDEDPLEAYMAQISSQNAKKSKNPVNQISG--------------IVTIIQEEKPEKEKG 221
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+++E N+D ++ ++ D+ + AA+L K + L++ DHS + Y F+K+FY+E EI
Sbjct: 222 QVLE-NEDNMDMVIDDF--DIETAAASLCHKGRM-LAQTDHSKVYYRKFKKNFYIETAEI 277
Query: 146 ARMTPEEVEKYKE 158
+MT EV+ Y+E
Sbjct: 278 QKMTKAEVKAYRE 290
>gi|320163352|gb|EFW40251.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 1073
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKY-KEVDN 161
EDL A N+ +K KKEL VDHS I Y F K+FY EVPE+ARMT EV++Y +E++N
Sbjct: 299 EDLQEKARNVTAK-KKELGAVDHSKIVYPEFSKNFYKEVPELARMTELEVKQYRRELEN 356
>gi|110739876|dbj|BAF01843.1| putative RNA helicase [Arabidopsis thaliana]
Length = 632
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 74/149 (49%), Gaps = 19/149 (12%)
Query: 20 ENG--KTAEED-IDPLDAFMQG-VHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGV 75
ENG + A+ED IDPLDAFM V E+ K++ + D K K G
Sbjct: 205 ENGGDRAADEDEIDPLDAFMNTMVLPEVEKLSNIVIDGILDFK---MNGKETG-----DQ 256
Query: 76 VKKSVEKAK-GELMEENQDGLEYS--SEEEQEDLTSTAANLASKQKK----ELSKVDHST 128
KK KA G +++ +YS ++ L + KK +LS VDHS
Sbjct: 257 AKKGFNKAALGRIIQGEDSDSDYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSK 316
Query: 129 IEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
IEY PFRK+FY+EV +I+RMT + V Y+
Sbjct: 317 IEYEPFRKNFYIEVKDISRMTQDAVNAYR 345
>gi|168059277|ref|XP_001781630.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666944|gb|EDQ53586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1072
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 19/148 (12%)
Query: 21 NGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGV----- 75
NG EE+IDPLDAFM + P V +T V+ SKP +V +G
Sbjct: 324 NGMEEEEEIDPLDAFMN-------SITIPEVSSTDAVELDAPESKP--IVAKSGSGKGQD 374
Query: 76 ----VKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE-LSKVDHSTIE 130
VK++ G +M + E + E ++ K K E L+ VDHS I+
Sbjct: 375 NVKPVKRNNRNTLGRIMPGDDSASEDEDDGEGDEDDDEFLKRVKKTKAEKLAIVDHSKIQ 434
Query: 131 YLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Y FRK+FY+EV EI+RMT E E Y++
Sbjct: 435 YPSFRKNFYIEVKEISRMTKAEAEAYRK 462
>gi|15232722|ref|NP_187573.1| DEAD-box ATP-dependent RNA helicase 45 [Arabidopsis thaliana]
gi|75337164|sp|Q9SF41.1|RH45_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 45
gi|6682258|gb|AAF23310.1|AC016661_35 putative RNA helicase [Arabidopsis thaliana]
gi|332641267|gb|AEE74788.1| DEAD-box ATP-dependent RNA helicase 45 [Arabidopsis thaliana]
Length = 989
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 23/151 (15%)
Query: 20 ENG--KTAEED-IDPLDAFMQG-VHEEMRKVNKPAVPTTADVK--PADSGSKPAGVVIVT 73
ENG + A+ED IDPLDAFM V E+ K++ + D K ++G +
Sbjct: 239 ENGGDRAADEDEIDPLDAFMNTMVLPEVEKLSNIVIDGILDFKMNGKETGDQ-------- 290
Query: 74 GVVKKSVEKAK-GELMEENQDGLEYS--SEEEQEDLTSTAANLASKQKK----ELSKVDH 126
KK KA G +++ +YS ++ L + KK +LS VDH
Sbjct: 291 --AKKGFNKAALGRIIQGEDSDSDYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDH 348
Query: 127 STIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
S IEY PFRK+FY+EV +I+RMT + V Y+
Sbjct: 349 SKIEYEPFRKNFYIEVKDISRMTQDAVNAYR 379
>gi|356505639|ref|XP_003521597.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 782
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E++IDPLDAFM+G+HEEMR P KP + ++ + K
Sbjct: 82 EDEIDPLDAFMEGIHEEMRAAPPP--------KPKEKAEDRYRDDEDDDPMESFLMAKKD 133
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLAS---------------KQKKELSKVDHSTIE 130
+ D L + ++E + A A K+ + + +DHS+I+
Sbjct: 134 LGLTLASDALHAGYDSDEEVYAAAKAVDAGMIEYDSDDNPIVIDKKKIEPIPALDHSSID 193
Query: 131 YLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Y PF KDFY E P I+ M+ ++V +Y++
Sbjct: 194 YEPFTKDFYEETPSISGMSEQDVSEYRK 221
>gi|426198422|gb|EKV48348.1| hypothetical protein AGABI2DRAFT_191977 [Agaricus bisporus var.
bisporus H97]
Length = 1063
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 72/143 (50%), Gaps = 29/143 (20%)
Query: 24 TAEED-IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEK 82
AEED +DPLDAFM GV EE++KVN D++ +I T ++ V
Sbjct: 258 VAEEDEVDPLDAFMSGVKEEVKKVN------LEDMQK----------MITTNGLQSRVRL 301
Query: 83 AKGELMEENQDGLEYSSEEEQEDLTSTAAN--------LASKQKKELSKVDHSTIEYLPF 134
+ DG+E E ++L +T N +KKEL+ VDHS I Y PF
Sbjct: 302 DD----QMGDDGVEAEVEGTVDELDATELNPEDILALAAKKAKKKELATVDHSRIHYEPF 357
Query: 135 RKDFYVEVPEIARMTPEEVEKYK 157
RK+FYV P+IA MT +E E +
Sbjct: 358 RKEFYVPPPDIAHMTDDEAELLR 380
>gi|115474897|ref|NP_001061045.1| Os08g0159900 [Oryza sativa Japonica Group]
gi|75328149|sp|Q84UQ1.1|RH42_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|29467560|dbj|BAC66730.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|37806159|dbj|BAC99664.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|113623014|dbj|BAF22959.1| Os08g0159900 [Oryza sativa Japonica Group]
gi|218200507|gb|EEC82934.1| hypothetical protein OsI_27901 [Oryza sativa Indica Group]
gi|222639953|gb|EEE68085.1| hypothetical protein OsJ_26125 [Oryza sativa Japonica Group]
Length = 1049
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 33/162 (20%)
Query: 15 NDNKDENGKTA--EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVV-- 70
N + NG A E++IDPLDAFM N +P A ++ S PA V
Sbjct: 262 NGGDNANGANAMDEDEIDPLDAFM----------NSMVLPEVAKLE-----SMPAANVDD 306
Query: 71 --------IVTGVVKKSVEKAKGELME------ENQDGLEYSSEEEQEDLTSTAANLASK 116
VT KK +K G +++ + D + E ED +
Sbjct: 307 KNDKSAKDAVTNGDKKGPKKVMGRIIQGEDSDSDYADDEDDEGGSEDEDDEEFMKRVKKT 366
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ ++L+ VDHS I+Y PFRK+FY+EV +I +M EEV Y++
Sbjct: 367 KAEKLAIVDHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRK 408
>gi|409079813|gb|EKM80174.1| hypothetical protein AGABI1DRAFT_57683 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 864
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 72/143 (50%), Gaps = 29/143 (20%)
Query: 24 TAEED-IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEK 82
AEED +DPLDAFM GV EE++KVN D++ +I T ++ V
Sbjct: 59 VAEEDEVDPLDAFMSGVKEEVKKVN------LEDMQK----------MITTNGLQSRVRL 102
Query: 83 AKGELMEENQDGLEYSSEEEQEDLTSTAAN--------LASKQKKELSKVDHSTIEYLPF 134
+ DG+E E ++L +T N +KKEL+ VDHS I Y PF
Sbjct: 103 DD----QMGDDGVEAEVEGTVDELDATELNPEDILALAAKKAKKKELATVDHSRIHYEPF 158
Query: 135 RKDFYVEVPEIARMTPEEVEKYK 157
RK+FYV P+IA MT +E E +
Sbjct: 159 RKEFYVPPPDIAHMTDDEAELLR 181
>gi|326524209|dbj|BAJ97115.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 764
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 26/153 (16%)
Query: 20 ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADS------------GSKPA 67
E GK +++IDPLDAFM + EE+R P ++PADS K A
Sbjct: 54 EGGKAEDDEIDPLDAFMAEIQEEIRAPPPPP--KPEALRPADSDEDDDPMESFLRAKKDA 111
Query: 68 GVVIVTGVVKKSV---EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE-LSK 123
G+ + V+ E+ + +EY S++ + K+K E +
Sbjct: 112 GLTLAADVMNAGYNSDEEVYAAAKAVDAGMMEYDSDDN--------PIVVDKRKIEPIPP 163
Query: 124 VDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKY 156
+DHSTIEY PF KDFY E P ++ M+ EEV Y
Sbjct: 164 LDHSTIEYEPFTKDFYEEKPSVSGMSVEEVADY 196
>gi|147821303|emb|CAN74586.1| hypothetical protein VITISV_041989 [Vitis vinifera]
Length = 771
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 5 NLED-DSDEDENDNKDENGKTAEED-------IDPLDAFMQGVHEEMRKVNKPAVPTTAD 56
N ED D D + D+KDE+G+ A IDPLDAFM+G+HEEMR P V A+
Sbjct: 43 NYEDHDLDNIDYDDKDEHGEVAGGGGEVDDGEIDPLDAFMEGIHEEMRAPPPPKVVEKAE 102
Query: 57 VK-------PADS---GSKPAGVVIVTGVVKKSV---EKAKGELMEENQDGLEYSSEEEQ 103
P +S K G+ + V+ E+ + +EY S++
Sbjct: 103 KYVDDDEDDPMESFLRAKKDTGLALAADVMHAGYDSDEEVYAAAKAVDAGLIEYDSDD-- 160
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
L K+ + + +DHS+IEY PF KDFY E I+ MT ++V +Y++
Sbjct: 161 -----NPIVLDKKKIEPIPALDHSSIEYEPFNKDFYEEKDSISGMTEQDVTEYRK 210
>gi|428174215|gb|EKX43112.1| hypothetical protein GUITHDRAFT_159806 [Guillardia theta CCMP2712]
Length = 1097
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 18/134 (13%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME 89
DPL+A+M+ V+ E++++ + ++V DS ++ + S + K ME
Sbjct: 285 DPLEAYMKSVNSEVKQLEEVDKKRMSNVVDMDS-------ILKMNKNQGSANQGKSRSME 337
Query: 90 ENQDGLEYSSEEEQ------EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
GL E E E+L KQ L VDHS + Y+PFR++FY+EVP
Sbjct: 338 ----GLGVRMEVEDSIPDLDEELKRKNEEFDIKQWN-LRPVDHSQMNYVPFRRNFYIEVP 392
Query: 144 EIARMTPEEVEKYK 157
EIA+MT +EV+ Y+
Sbjct: 393 EIAKMTDDEVKDYR 406
>gi|85001021|ref|XP_955229.1| RNA helicase [Theileria annulata strain Ankara]
gi|65303375|emb|CAI75753.1| RNA helicase, putative [Theileria annulata]
Length = 976
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 84 KGELMEENQDGLEYSSEEEQEDLTSTAAN-----------LASKQKKELSKVDHSTIEYL 132
K +++E + +GLE +++ D T + + KKEL +VDH+ IEYL
Sbjct: 266 KSKIIEYDDEGLERCFSDDEYDPTKVSMGGPEYIELLPKIIKGGGKKELPRVDHTKIEYL 325
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYKEVDN 161
PFRK+FYV+V I M EV+ ++ +
Sbjct: 326 PFRKNFYVQVSSITNMGEHEVDAFRRANG 354
>gi|307110891|gb|EFN59126.1| hypothetical protein CHLNCDRAFT_137938 [Chlorella variabilis]
Length = 1343
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 35/40 (87%)
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
++L VDH+ I+Y PFR++FY+EVPE+ARM+ EEVE+Y++
Sbjct: 390 EKLVAVDHAAIQYPPFRRNFYIEVPELARMSGEEVEEYRK 429
>gi|255940232|ref|XP_002560885.1| Pc16g05440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585508|emb|CAP93214.1| Pc16g05440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1162
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 27/157 (17%)
Query: 5 NLEDDSDEDENDNKDENGKTAE----EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
N DD +E+ N + E E++DPLDAFM G+ + + P TT
Sbjct: 369 NHNDDVHMEESTNVQADSTPMEVDDAEEVDPLDAFMAGLQD-----STPPERTTG----- 418
Query: 61 DSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE 120
T KK+ ++ + ++ + +E+ ED+ + AA K+K+E
Sbjct: 419 -----------ATFAKKKTNQQPEAMFGDDEDVDVTAVGDEKAEDVLALAA--IKKKKRE 465
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+ +DH+ IEY PFRK+FY E +A MT EEV +
Sbjct: 466 MPDIDHTKIEYEPFRKEFYTEPSHLAEMTEEEVASLR 502
>gi|225437591|ref|XP_002277419.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Vitis vinifera]
gi|297743992|emb|CBI36962.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 5 NLED-DSDEDENDNKDENGKTAEED-------IDPLDAFMQGVHEEMRKVNKPAVPTTAD 56
N ED D D + D+KDE+G+ A IDPLDAFM+G+HEEMR P + A+
Sbjct: 43 NYEDHDLDNIDYDDKDEHGEVAGGGGEVDDGEIDPLDAFMEGIHEEMRAPPPPKLVEKAE 102
Query: 57 VK-------PADS---GSKPAGVVIVTGVVKKSV---EKAKGELMEENQDGLEYSSEEEQ 103
P +S K G+ + V+ E+ + +EY S++
Sbjct: 103 KYVDDDEDDPMESFLRAKKDTGLALAADVMHAGYDSDEEVYAAAKAVDAGLIEYDSDD-- 160
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
L K+ + + +DHS+IEY PF KDFY E I+ MT ++V +Y++
Sbjct: 161 -----NPIVLDKKKIEPIPALDHSSIEYEPFNKDFYEEKDSISGMTEQDVTEYRK 210
>gi|170589285|ref|XP_001899404.1| KIAA0801 protein [Brugia malayi]
gi|158593617|gb|EDP32212.1| KIAA0801 protein, putative [Brugia malayi]
Length = 964
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 94/170 (55%), Gaps = 28/170 (16%)
Query: 2 KKWNLEDDSDEDENDNKDENGKTAEED--IDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
KKW L+++ +++E+ ++ K +E+D +DPLDAFM V +E+R + ++
Sbjct: 134 KKWTLDNEEEDEESTPQEIEKKESEDDDEVDPLDAFMSEVSKEVR-------ASKYGLEQ 186
Query: 60 ADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK 119
+ G A +V++ V ++E KGE++E + + D+ A++L +K +
Sbjct: 187 NNEGK--ARIVVIKSDV--NLEPKKGEIIEAEDEIEPVIDDF---DIEKAASSLIAK-GR 238
Query: 120 ELSKVDHST-----------IEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+L + DHS + Y PFRK+FYVE E+A++T +EV++Y+E
Sbjct: 239 QLPQTDHSKATTFQDLYCIFVYYRPFRKNFYVETAELAKITKKEVDEYRE 288
>gi|297833724|ref|XP_002884744.1| hypothetical protein ARALYDRAFT_317764 [Arabidopsis lyrata subsp.
lyrata]
gi|297330584|gb|EFH61003.1| hypothetical protein ARALYDRAFT_317764 [Arabidopsis lyrata subsp.
lyrata]
Length = 930
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 42/180 (23%)
Query: 2 KKWNLEDDSDE----------DENDNK------DENGKTAEEDIDPLDAFMQG-VHEEMR 44
K W LE +SD+ D D K +G EE+IDPLDA+M V E+
Sbjct: 161 KAWTLEGESDDEVKSELDMDFDGGDAKMVDLESGGDGPEEEEEIDPLDAYMNSKVLPEVE 220
Query: 45 KVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEE-- 102
K+ ++ T D + K+ + K+ G +++ +YS +
Sbjct: 221 KLRSSSL-ETGDQQ------------------KEGLNKSLGRIIQGEDSDSDYSEPKSDD 261
Query: 103 ----QEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ED + + ++LS VDHS IEY PFRK+FY+EV +I+RMT + V Y++
Sbjct: 262 DPSLEEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQDVVNAYRK 321
>gi|270012072|gb|EFA08520.1| hypothetical protein TcasGA2_TC006173 [Tribolium castaneum]
Length = 702
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 18/136 (13%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGE 86
+D DPLDA+M G+ ++M K KP S S+P GV + ++ VE++
Sbjct: 94 DDDDPLDAYMAGIEKQM-KSEKPG-----------SSSQPTGVR--NDLEEEDVEESYYR 139
Query: 87 LMEENQD-GLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVEV 142
MEEN + GL EE + + +KK L +DHSTIEY PF K+FY E
Sbjct: 140 YMEENPNAGLAPVEEELDLEYDEDGNPIPPDKKKIIDPLPPIDHSTIEYKPFEKNFYNEH 199
Query: 143 PEIARMTPEEVEKYKE 158
PEIA ++ ++V + ++
Sbjct: 200 PEIASLSNKQVAELRK 215
>gi|167522064|ref|XP_001745370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776328|gb|EDQ89948.1| predicted protein [Monosiga brevicollis MX1]
Length = 498
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/47 (57%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK-EVDN 161
+Q+KEL+ DH+ I+Y FRK FY EV +IARMT EEV++YK E++N
Sbjct: 1 RQQKELTVPDHAQIQYDSFRKAFYTEVSDIARMTEEEVDQYKAEMEN 47
>gi|409049919|gb|EKM59396.1| hypothetical protein PHACADRAFT_249858 [Phanerochaete carnosa
HHB-10118-sp]
Length = 851
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 20/135 (14%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVK---KSVEK 82
E+D+DPLDAFM GV EE++KVN D+K D V V V+ + ++
Sbjct: 58 EDDVDPLDAFMSGVKEEVKKVN------LEDMKKMD--------VNVASRVRLDERMADE 103
Query: 83 AKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEV 142
E+ D L+ ++E ED+ + AA +KK+L+ +DHS I Y PFRK+FY+
Sbjct: 104 PGEEVEGPEPDELD-TTELNPEDILALAAK--KARKKDLATIDHSRINYEPFRKEFYIAP 160
Query: 143 PEIARMTPEEVEKYK 157
P++A MT EE + +
Sbjct: 161 PDVAAMTDEEADLLR 175
>gi|189239856|ref|XP_974261.2| PREDICTED: similar to CG6418 CG6418-PB [Tribolium castaneum]
Length = 699
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 18/136 (13%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGE 86
+D DPLDA+M G+ ++M K KP S S+P GV + ++ VE++
Sbjct: 94 DDDDPLDAYMAGIEKQM-KSEKPG-----------SSSQPTGVR--NDLEEEDVEESYYR 139
Query: 87 LMEENQD-GLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVEV 142
MEEN + GL EE + + +KK L +DHSTIEY PF K+FY E
Sbjct: 140 YMEENPNAGLAPVEEELDLEYDEDGNPIPPDKKKIIDPLPPIDHSTIEYKPFEKNFYNEH 199
Query: 143 PEIARMTPEEVEKYKE 158
PEIA ++ ++V + ++
Sbjct: 200 PEIASLSNKQVAELRK 215
>gi|328766962|gb|EGF77014.1| hypothetical protein BATDEDRAFT_645, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 589
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVD 160
+KK++ VDHS I Y PFRKDFYVE PE+A MT EEV++ K +D
Sbjct: 2 KKKDIVPVDHSRINYEPFRKDFYVEPPELANMTAEEVDQ-KRID 44
>gi|189188996|ref|XP_001930837.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187972443|gb|EDU39942.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1165
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 39/136 (28%)
Query: 19 DENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK 78
D++ E+DIDPLDAFM ++E N P+
Sbjct: 404 DQHTGAEEDDIDPLDAFMADLNEPQPSRNAPS---------------------------- 435
Query: 79 SVEKAKGELMEENQ-DGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKD 137
GE M ++ + +E S +E D+ A K+K+E+ VDH +EY PFRK+
Sbjct: 436 ------GEAMFADELEPIEMSVADE--DINQLRA--VKKKKREVITVDHEKVEYEPFRKN 485
Query: 138 FYVEVPEIARMTPEEV 153
FY E EI++M PEEV
Sbjct: 486 FYTEPAEISQMKPEEV 501
>gi|336386298|gb|EGO27444.1| hypothetical protein SERLADRAFT_354747 [Serpula lacrymans var.
lacrymans S7.9]
Length = 914
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E+ +DPLDA+M GV EE++KVN D+K SG + V + + + E
Sbjct: 92 EDAVDPLDAYMTGVKEEVKKVN------AEDLKKMASGLGSSRVRLDERMAEDGTEDVNE 145
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
++E+ D +++ ED+ + AA +KK+L+ VDHS I+Y PFRK+FY P+I
Sbjct: 146 AVVEDELD----ATDLNPEDILALAAK--KAKKKDLAAVDHSRIQYEPFRKEFYAPPPDI 199
Query: 146 ARMT 149
A MT
Sbjct: 200 AAMT 203
>gi|302815317|ref|XP_002989340.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
gi|300142918|gb|EFJ09614.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
Length = 653
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 44/163 (26%)
Query: 20 ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKS 79
ENG E+++DPLDAFM+G+HEE+ ++ P GSKP+ +
Sbjct: 25 ENG---EDEVDPLDAFMEGIHEEVSRIPTP-------------GSKPSRIQEEEEEEDDP 68
Query: 80 VEKAKGELMEENQD-GLEYSSE------EEQEDLTSTA---------------ANLASKQ 117
+E ++ +D GL ++E + E++ + A A + + +
Sbjct: 69 MET----FLKARRDAGLSLAAEALHAGYDSDEEVYAAARAVEKGMVDYDSDDNAIITADR 124
Query: 118 KK--ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
KK L+ +DHS ++Y PF KDFY E I+ ++ E+V Y++
Sbjct: 125 KKIDPLAPLDHSQLQYAPFDKDFYEEDASISGLSEEDVTSYRQ 167
>gi|391348261|ref|XP_003748366.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Metaseiulus
occidentalis]
Length = 748
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 19/158 (12%)
Query: 4 WNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSG 63
WN DEDE K ++++ DPLDAFM + ++M+K +KP T K + G
Sbjct: 80 WN----EDEDETPQKQARDDDSDDEEDPLDAFMADLSKDMKKQDKPKDTT----KTSKRG 131
Query: 64 SKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAAN----LASKQKK 119
I + + E++ + M+EN + E++ + N L SK
Sbjct: 132 -------IRDDIEAEDDEESYYKFMKENPLAGTAADEDDLDLEYDEDGNPIAPLKSKWID 184
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
L +DHS I+Y PF K+FY E PEI+ +T +EV+K +
Sbjct: 185 PLPAIDHSLIQYQPFEKNFYDEHPEISNLTADEVQKLR 222
>gi|71027833|ref|XP_763560.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68350513|gb|EAN31277.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 894
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVDN 161
KKEL +VDHS I+YLPFRK+FYV+V I M EV+ +++ +
Sbjct: 360 KKELPRVDHSKIDYLPFRKNFYVQVSSITNMGEHEVDAFRKANG 403
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVD 160
K K+EL +VDH+ IEY+PF+K+FYV+V I M+ EV+ +++ +
Sbjct: 286 KSKRELPRVDHTKIEYMPFKKNFYVQVSSITNMSEHEVDAFRKAN 330
>gi|392568072|gb|EIW61246.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 830
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 32/140 (22%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
++D+DPLDAFM GV EE++KVN D+K + TG + G
Sbjct: 37 DDDVDPLDAFMSGVKEEVKKVN------LEDMKKLNH----------TGHL--------G 72
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAAN--------LASKQKKELSKVDHSTIEYLPFRKD 137
++E+ D + S E ++L +T N +KK+++ VDHS + Y PFRK+
Sbjct: 73 VRLDEHGDDQDDESRPEVDELDATELNPEDILALAAKKARKKDMAAVDHSKVPYEPFRKE 132
Query: 138 FYVEVPEIARMTPEEVEKYK 157
FYV P+IA MT E+ + +
Sbjct: 133 FYVPPPDIAEMTDEDADLLR 152
>gi|255088653|ref|XP_002506249.1| predicted protein [Micromonas sp. RCC299]
gi|226521520|gb|ACO67507.1| predicted protein [Micromonas sp. RCC299]
Length = 1063
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EED+DPL+AFM + V P VK D G K V G+V++ +
Sbjct: 247 EEDVDPLEAFMAANDSKPANVGLARPP----VKRDDGGVKGGRAVKKIGLVRRFFDADSD 302
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVD------HSTIEYLPFRKDFY 139
G S + + A A KQ+ +SK D H +I+Y PFRK+FY
Sbjct: 303 GGDSSESGGGADSDTDGAG--SDDDAEWARKQQSRMSKADKLGVADHDSIDYPPFRKNFY 360
Query: 140 VEVPEIARMTPEEVEKYK 157
+E EIARMT EV++ +
Sbjct: 361 IESYEIARMTKAEVKELR 378
>gi|294658221|ref|XP_002770738.1| DEHA2F04466p [Debaryomyces hansenii CBS767]
gi|218511822|sp|Q6BML1.2|PRP5_DEBHA RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|202952969|emb|CAR66268.1| DEHA2F04466p [Debaryomyces hansenii CBS767]
Length = 913
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 101 EEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
++Q+D+ S+ N ++K+L VDH+ I+Y PFRKDFY E EI+++ EEV +
Sbjct: 242 QKQQDILSSKLNRLQNKQKQLDDVDHNQIQYHPFRKDFYTEPTEISKLPEEEVANLR 298
>gi|302798402|ref|XP_002980961.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
gi|300151500|gb|EFJ18146.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
Length = 653
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 41/158 (25%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
E+++DPLDAFM+G+HEE+ ++ P GSKP+ + +E
Sbjct: 27 GEDEVDPLDAFMEGIHEEVSRIPTP-------------GSKPSRIQEEEEEEDDPMET-- 71
Query: 85 GELMEENQD-GLEYSSE------EEQEDLTSTA---------------ANLASKQKK--E 120
++ +D GL ++E + E++ + A A + + +KK
Sbjct: 72 --FLKARRDAGLSLAAEALHAGYDSDEEVYAAARAVEKGMVDYDSDDNAIITADRKKIDP 129
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
L+ +DHS ++Y PF KDFY E I+ ++ E+V Y++
Sbjct: 130 LAPLDHSQLQYAPFDKDFYEEDASISGLSEEDVTSYRQ 167
>gi|425774421|gb|EKV12728.1| DEAD/DEAH box RNA helicase [Penicillium digitatum PHI26]
gi|425783591|gb|EKV21433.1| DEAD/DEAH box RNA helicase [Penicillium digitatum Pd1]
Length = 1076
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 25/132 (18%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGE 86
E+IDPLDAFM + + S P I KK+ +
Sbjct: 308 EEIDPLDAFMAELQD----------------------STPPERTIGATFAKKTTHQRPEA 345
Query: 87 LMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+ +++D + +E+ ED+ + AA K+K+E+ +DH+ I+Y PFRK+FY E +
Sbjct: 346 MFGDDEDVDVTAVGDEKAEDVLALAA--IKKKKREMPDIDHTKIDYEPFRKEFYTEPSNL 403
Query: 146 ARMTPEEVEKYK 157
A MT EEV +
Sbjct: 404 AEMTEEEVANLR 415
>gi|345566862|gb|EGX49802.1| hypothetical protein AOL_s00076g686 [Arthrobotrys oligospora ATCC
24927]
Length = 1086
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 63/134 (47%), Gaps = 31/134 (23%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EEDIDPLDAFM + +TA TGV K A
Sbjct: 329 EEDIDPLDAFMSNIA------------STA-----------------TGVPKPQKGPALA 359
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
E M + D + + +D+ + A+ K+KKEL VDHS ++Y PFRK FYVE E+
Sbjct: 360 EAMFGDDDDNLTAIVNDPDDILAMASK--MKKKKELPTVDHSKVQYEPFRKSFYVEPAEL 417
Query: 146 ARMTPEEVEKYKEV 159
A M+ +EV + V
Sbjct: 418 ADMSTQEVNDLRLV 431
>gi|428671738|gb|EKX72653.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 942
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVD 160
K K+EL +VDHS I+YLPF K+FYV+V I M EV+ +++ +
Sbjct: 287 KTKRELPRVDHSKIDYLPFNKNFYVQVSAITAMKEHEVDAFRKTN 331
>gi|384485449|gb|EIE77629.1| hypothetical protein RO3G_02333 [Rhizopus delemar RA 99-880]
Length = 1089
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
ED+ + AA ++K+++ VDHS IEY FRKDFY+E PE+ MTP++V+
Sbjct: 384 EDIIAYAAKKV--KRKDIAPVDHSKIEYEDFRKDFYIEPPELREMTPDQVD 432
>gi|357112553|ref|XP_003558073.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like
[Brachypodium distachyon]
Length = 767
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 20 ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKP----------AGV 69
E GK +E+IDPLDAFM + EE+R P P + +D P AG+
Sbjct: 54 EGGKAEDEEIDPLDAFMAEIQEEIRAPPPPPKPEALRLGDSDEDDDPMESFLRAKKDAGL 113
Query: 70 VIVTGVVKKSV---EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE-LSKVD 125
+ V+ E+ + +EY S++ + K+K E + +D
Sbjct: 114 ALAADVMNAGYNSDEEVYAAAKAVDAGMMEYDSDDN--------PIVVDKRKIEPIPPLD 165
Query: 126 HSTIEYLPFRKDFYVEVPEIARMTPEEVEKY 156
HSTIEY F KDFY E P I+ M EEV Y
Sbjct: 166 HSTIEYESFNKDFYEEKPSISGMNAEEVADY 196
>gi|440294337|gb|ELP87354.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba invadens
IP1]
Length = 714
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 104 EDLTSTAANLASKQKK--ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVD 160
EDLT L +KK EL +VDH TI YLP K YVEVP++ R+T EV++ + V+
Sbjct: 59 EDLTQYKDELTQIKKKRLELLEVDHKTINYLPLVKGLYVEVPDVTRLTDNEVKEIRRVE 117
>gi|299747858|ref|XP_001837294.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coprinopsis
cinerea okayama7#130]
gi|298407711|gb|EAU84911.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coprinopsis
cinerea okayama7#130]
Length = 1081
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 23/138 (16%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+IDPLDAFM V EE++KVN D + + + P G K ++ G
Sbjct: 283 EEEIDPLDAFMSEVKEEVKKVN------MQDAQKMLNSNGP-------GRSKIRLDDRMG 329
Query: 86 ELMEENQDGLEYSSEE------EQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFY 139
+ E + D E + +E ED+ + AA A K++ + VDHS ++Y PFRK+FY
Sbjct: 330 D--EGSDDEQEAAPDELDATDLNPEDILALAAKKAKKKELAV--VDHSKVQYEPFRKEFY 385
Query: 140 VEVPEIARMTPEEVEKYK 157
+ P+IA MT +E E +
Sbjct: 386 IPPPDIASMTEDEAELLR 403
>gi|339232568|ref|XP_003381401.1| ATP-dependent RNA helicase DDX42 [Trichinella spiralis]
gi|316979810|gb|EFV62545.1| ATP-dependent RNA helicase DDX42 [Trichinella spiralis]
Length = 741
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 5 NLED-DSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSG 63
NLED D E N+ + G +++++DPLDAFM V ++ ++ + ++ K
Sbjct: 31 NLEDTDEAESNFSNQHKGGSNSDDEVDPLDAFMADVEKQAKRDKEISIENAKHSKVEKLT 90
Query: 64 SKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTA--ANLASKQKKE- 120
S G T + + +++ +E+N+D L SE E+ED N K+ K
Sbjct: 91 SSKLGR---TDIEDEDEQESYFNWVEQNKDKLGKISEVEEEDDLEYDEEGNPIYKKCKYI 147
Query: 121 --LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
L +DHS I+Y PF K+FY+E +IA++T +V + +E
Sbjct: 148 DPLPPIDHSKIDYEPFEKNFYIEHADIAKLTQPQVNELRE 187
>gi|412990813|emb|CCO18185.1| predicted protein [Bathycoccus prasinos]
Length = 1225
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 114 ASKQKKELSKVD------HSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
A+KQK +LSK D HS I+Y PFRK+FY+E E+++MT EEV++ +
Sbjct: 416 AAKQKAKLSKADKLGAVVHSDIDYPPFRKNFYIEAYEMSKMTKEEVKELR 465
>gi|367020544|ref|XP_003659557.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
gi|347006824|gb|AEO54312.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
Length = 993
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 36/158 (22%)
Query: 9 DSDEDENDNKDENGKTA-----EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADS- 62
DS + KDE A +ED+DPLDAFM AD++ S
Sbjct: 211 DSGAPNGEAKDEKAAPAPSMDVDEDVDPLDAFM------------------ADLEQTGSA 252
Query: 63 ---GSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK 119
G KPA ++ KG E ++ E +Q D + A A K++K
Sbjct: 253 GGLGPKPA---------RQEQNGGKGFEPEAYFSDDDFGYEADQADPAAILAMAAKKKRK 303
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
++ +D+S IE P RK+F+VE E+++MT EE + +
Sbjct: 304 DIPTIDYSKIELNPIRKNFWVEPQELSQMTEEEAAELR 341
>gi|451998973|gb|EMD91436.1| hypothetical protein COCHEDRAFT_1101623 [Cochliobolus
heterostrophus C5]
Length = 1058
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 59/135 (43%), Gaps = 37/135 (27%)
Query: 19 DENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK 78
DE E++IDPLDAFM + E P S P+G +
Sbjct: 297 DETAGAEEDEIDPLDAFMADLTE-----------------PQPSRGAPSGQAMFAD---- 335
Query: 79 SVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
E E E QD LE + K+KKE++ VDH +EY PFRK F
Sbjct: 336 --ELEPVETSVEAQDLLELRAA--------------KKKKKEVATVDHDKVEYEPFRKSF 379
Query: 139 YVEVPEIARMTPEEV 153
Y E E+++MTPEEV
Sbjct: 380 YTEPLEVSQMTPEEV 394
>gi|449484206|ref|XP_004156816.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
24-like [Cucumis sativus]
Length = 774
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 26/146 (17%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGEL- 87
IDPLDAFM+G+HEEM+ P D D P +S +AK ++
Sbjct: 83 IDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDDEEDPM----------ESFLRAKKDVG 132
Query: 88 MEENQDGLEYSSEEEQEDLTSTAA------------NLASKQKKE---LSKVDHSTIEYL 132
+ D L + ++E + A N+ +KK+ + +DHS+I+Y
Sbjct: 133 LTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKXEPIPSLDHSSIDYE 192
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYKE 158
PF KDFY E I+ M+ EEV +Y++
Sbjct: 193 PFNKDFYEEKASISGMSEEEVSEYRK 218
>gi|452989114|gb|EME88869.1| hypothetical protein MYCFIDRAFT_114276, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1111
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 33/138 (23%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
+ED+DPLDAFM + E + +P+ +P
Sbjct: 355 DEDVDPLDAFMNNLEEVPERRPQPSAAKRGTREP-------------------------- 388
Query: 86 ELMEENQDGLEYSS-EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
L +E+ DG + + + EDL N A ++KKE+ VDHS I+Y FRK+FY E E
Sbjct: 389 RLFDED-DGPDLDAVGDNPEDLL----NPARRKKKEIPAVDHSKIDYESFRKNFYNESIE 443
Query: 145 IARMTPEEVEKYK-EVDN 161
++ MT ++V + E+DN
Sbjct: 444 VSEMTEDDVTTLRAELDN 461
>gi|449469020|ref|XP_004152219.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Cucumis
sativus]
Length = 777
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 26/146 (17%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGEL- 87
IDPLDAFM+G+HEEM+ P D D P +S +AK ++
Sbjct: 80 IDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDDEEDPM----------ESFLRAKKDVG 129
Query: 88 MEENQDGLEYSSEEEQEDLTSTAA------------NLASKQKKELSKV---DHSTIEYL 132
+ D L + ++E + A N+ +KK++ + DHS+I+Y
Sbjct: 130 LTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPSLDHSSIDYE 189
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYKE 158
PF KDFY E I+ M+ EEV +Y++
Sbjct: 190 PFNKDFYEEKASISGMSEEEVSEYRK 215
>gi|452848275|gb|EME50207.1| hypothetical protein DOTSEDRAFT_68922 [Dothistroma septosporum
NZE10]
Length = 936
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 36/147 (24%)
Query: 19 DENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK 78
D N +E++DPLDAFM + + M + P +
Sbjct: 165 DPNQMELDEEVDPLDAFMSDLGQSMERAPAP----------------------------R 196
Query: 79 SVEKA--KGELMEENQDGLEYSS-EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFR 135
S+ K +G + + DG + + + EDL S ++KKE+ VDHS IEY R
Sbjct: 197 SIGKRANRGTQLFDEDDGPDLDAVGDNPEDLLSNP----KRKKKEVPNVDHSKIEYETIR 252
Query: 136 KDFYVEVPEIARMTPEEVEKYK-EVDN 161
K+FY E E+A M+ E+V+K + ++DN
Sbjct: 253 KNFYNESIEMAEMSQEDVDKLRADLDN 279
>gi|402078084|gb|EJT73433.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1218
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 23/134 (17%)
Query: 24 TAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKA 83
T E+D+DPLDAFM + E PA + + GSKPA +
Sbjct: 461 TVEDDVDPLDAFMADLEE-------PATSARSKLAKTAGGSKPAPIP------------- 500
Query: 84 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
E + D S E D + A A ++KKE+ K+D+S ++ RK+F+VE
Sbjct: 501 --EAYFSDDDDFA-SGAAEDPDAKTLLALTAKRKKKEIPKIDYSKLDLGVIRKNFWVEPS 557
Query: 144 EIARMTPEEVEKYK 157
E++ M+ EV + +
Sbjct: 558 ELSEMSEAEVAELR 571
>gi|451848387|gb|EMD61693.1| hypothetical protein COCSADRAFT_163118 [Cochliobolus sativus
ND90Pr]
Length = 1132
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 61/138 (44%), Gaps = 43/138 (31%)
Query: 19 DENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTG---V 75
DE E++IDPLDAFM + E P S P+G +
Sbjct: 371 DETVGAEEDEIDPLDAFMADLTE-----------------PQPSRGAPSGQAMFADELEP 413
Query: 76 VKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFR 135
V+ SVE QD LE + K+KKE++ VDH +EY PFR
Sbjct: 414 VETSVEA---------QDLLELRAA--------------KKKKKEVATVDHDKVEYEPFR 450
Query: 136 KDFYVEVPEIARMTPEEV 153
K FY E E+++MTPEEV
Sbjct: 451 KSFYTEPLEVSQMTPEEV 468
>gi|258570243|ref|XP_002543925.1| hypothetical protein UREG_03442 [Uncinocarpus reesii 1704]
gi|237904195|gb|EEP78596.1| hypothetical protein UREG_03442 [Uncinocarpus reesii 1704]
Length = 1206
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 25/132 (18%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+IDPLDAFM G+ + + A P+ + K + S +P + G
Sbjct: 446 EEEIDPLDAFMSGLKDSV-----AAKPSKSRTKTSKSKQEPEAIF--------------G 486
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+ + N ++ E +D + A +++KK+L V+H ++Y PFRK+FY E ++
Sbjct: 487 DEDDVNLKAMDL----EADDFLAIANK--TRKKKDLPSVNHEKMDYEPFRKNFYTEPVDL 540
Query: 146 ARMTPEEVEKYK 157
A + EEV +
Sbjct: 541 AELNEEEVAALR 552
>gi|18407327|ref|NP_566099.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
gi|75318047|sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|16323192|gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|20196880|gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|21700913|gb|AAM70580.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|330255734|gb|AEC10828.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
Length = 760
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 27/148 (18%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGE 86
++IDPLDAFM+G+H+EM+ P P + D P +S KAK +
Sbjct: 76 DEIDPLDAFMEGIHQEMKSAPPPK-PKEKLERYKDDDDDPV----------ESYLKAKKD 124
Query: 87 L-MEENQDGLEYSSEEEQEDLTSTAA--------------NLASKQKKE-LSKVDHSTIE 130
L + D L ++E + A + K+K E ++ +DHS+I+
Sbjct: 125 LGLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNPIVVDKRKIEPITALDHSSID 184
Query: 131 YLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Y P KDFY E+ I+ MT +E Y++
Sbjct: 185 YEPINKDFYEELESISGMTEQETTDYRQ 212
>gi|388580695|gb|EIM21008.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 969
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 18/125 (14%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME 89
DPLDAFM GV EE+ +VN+ +D K G+KP V + + E
Sbjct: 214 DPLDAFMSGVKEEVTRVNE------SDKK--RMGTKPNTVT--------AARLDDDDDDE 257
Query: 90 ENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMT 149
E + E S+ ED+ + AA+ ++KE++ DHS ++Y PFRK FY EI ++
Sbjct: 258 EEEQKEEDVSKMSAEDILALAASRV--KRKEVAVTDHSKVDYEPFRKSFYNPPSEIQNLS 315
Query: 150 PEEVE 154
E+ E
Sbjct: 316 EEDAE 320
>gi|340503944|gb|EGR30445.1| hypothetical protein IMG5_131890 [Ichthyophthirius multifiliis]
Length = 399
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
Query: 84 KGELM-------EENQDGLEYSSEEEQ-EDLTSTAANLASKQKKELSKVDHSTIEYLPFR 135
+G LM EENQ+ Y ++ EQ ED A QKK L +V++ + + +PFR
Sbjct: 145 RGALMSDEEVAQEENQEIENYENQGEQKEDYLERIKREA--QKKNLKQVEYKSEDLVPFR 202
Query: 136 KDFYVEVPEIARMTPEEVEKYKE 158
KDFY+E EI ++T +EV++Y+E
Sbjct: 203 KDFYIESKEIRQITEQEVKQYRE 225
>gi|326476402|gb|EGE00412.1| Pre-mRNA-processing ATP-dependent RNA helicase prp5 [Trichophyton
tonsurans CBS 112818]
Length = 1182
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 26/129 (20%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELM 88
IDPLDAFM + + ++P + VKP+ S +++ +
Sbjct: 428 IDPLDAFMSDLKQST------SIPKQS-VKPSSS----------------KLQQPEAMFG 464
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
+EN ++ E E +DL + A SK+KK++ V+HS I Y PFRK+FY E ++A +
Sbjct: 465 DENDINMD-PVEPEADDLFALANK--SKRKKDIPPVNHSKINYEPFRKNFYTEPVDLAGL 521
Query: 149 TPEEVEKYK 157
T EV +
Sbjct: 522 TEAEVTNIR 530
>gi|414866472|tpg|DAA45029.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 766
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 22/166 (13%)
Query: 6 LEDDSDEDENDNKDENGKT-AEEDIDPLDAFMQGVHEEMRKVN--------KPAVPTTAD 56
DD+ D + GK EE++DPLDAFM + EE+R + +
Sbjct: 43 FSDDAPSDAQASTAVEGKAENEEEMDPLDAFMAEIQEEIRAPPPPPKPEALRRTDSDDDE 102
Query: 57 VKPADS---GSKPAGVVIVTGVVKKSV---EKAKGELMEENQDGLEYSSEEEQEDLTSTA 110
P +S K AG+ + V++ E+ + +EY S++
Sbjct: 103 DDPVESFLRAKKDAGLTLAADVMRAGYDSDEEVYAAAKAVDAGMMEYDSDD-------NP 155
Query: 111 ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKY 156
+ K+ + + +DHSTIEY F KDFY E P I+ M+ +EV Y
Sbjct: 156 IVIDKKKIEPIPALDHSTIEYDAFTKDFYEEKPSISGMSDQEVTDY 201
>gi|452821200|gb|EME28233.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 1145
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 123 KVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
KVDHS Y+ F+K+FY+E PEIA+M+ E+V +Y+
Sbjct: 381 KVDHSKYNYIHFKKNFYIEAPEIAKMSWEDVHEYR 415
>gi|281207155|gb|EFA81338.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1157
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME 89
DPLDAFM + + NK AD +G A G ++ K + +E
Sbjct: 382 DPLDAFMNQLMKSNNNTNK------AD----GNGGNGATTAAANGNGNGTIVLMKAKRLE 431
Query: 90 ENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMT 149
DG E EEE ED + K K+EL DHS+I+Y F K+FY+EVP ++ MT
Sbjct: 432 ---DGDEADFEEESEDENEQEKEV-KKGKRELLSTDHSSIDYPAFEKNFYIEVPTLSNMT 487
Query: 150 PEEVEKYK 157
EV Y+
Sbjct: 488 DTEVLDYR 495
>gi|119173770|ref|XP_001239279.1| DEAD/DEAH box RNA helicase [Coccidioides immitis RS]
gi|118597491|sp|Q1DHB2.1|PRP5_COCIM RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|392869485|gb|EJB11830.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coccidioides
immitis RS]
Length = 1197
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 31/135 (22%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+IDPLDAFM G+ + V + +K+V K K
Sbjct: 435 EEEIDPLDAFMSGLKDS--------------------------VTVDASKYRKNVSKPKQ 468
Query: 86 E--LMEENQDGLEYSSEE-EQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEV 142
E + ++D ++ + + E +D + + +++KK+L V+H TI+Y PFRK FY E
Sbjct: 469 EPEAIFGDEDDVDLKAMDFEADDFLAITSK--TRKKKDLPTVNHETIDYEPFRKSFYTEP 526
Query: 143 PEIARMTPEEVEKYK 157
++A + EEV +
Sbjct: 527 VDLAELNDEEVAALR 541
>gi|260947074|ref|XP_002617834.1| hypothetical protein CLUG_01293 [Clavispora lusitaniae ATCC 42720]
gi|238847706|gb|EEQ37170.1| hypothetical protein CLUG_01293 [Clavispora lusitaniae ATCC 42720]
Length = 896
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
KELS VDH +++Y+PFRKDFY E ++ +T EEVE+ +
Sbjct: 241 KELSVVDHDSVDYMPFRKDFYQESQSVSDLTEEEVEELR 279
>gi|297828467|ref|XP_002882116.1| hypothetical protein ARALYDRAFT_483908 [Arabidopsis lyrata subsp.
lyrata]
gi|297327955|gb|EFH58375.1| hypothetical protein ARALYDRAFT_483908 [Arabidopsis lyrata subsp.
lyrata]
Length = 739
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 26/149 (17%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
+++IDPLDAFM+G+H+EM+ P + D P +S KAK
Sbjct: 75 DDEIDPLDAFMEGIHQEMKSAPPPKPKEKLERYKDDEDDDPV----------ESFLKAKK 124
Query: 86 EL-MEENQDGLEYSSEEEQEDLTSTAA--------------NLASKQKKE-LSKVDHSTI 129
+L + D L ++E + A + K+K E + +DHS+I
Sbjct: 125 DLGLTLAADALNAGYNSDEEVYAAAKAVDAGMLEYDSDDNPIVVDKRKIEPIPALDHSSI 184
Query: 130 EYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+Y P KDFY EV I+ M+ +E Y++
Sbjct: 185 DYEPINKDFYEEVESISGMSEQETSDYRQ 213
>gi|395324143|gb|EJF56589.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1073
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 20/126 (15%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSV-EKAK 84
+++IDPLDAFM GV EE++KVN D+K + TG + + E
Sbjct: 282 DDEIDPLDAFMSGVKEEVKKVN------LEDLKKMKT----------TGSLGVRLDEPGA 325
Query: 85 GELMEENQDGLEY-SSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
E E+ D E +++ ED+ + AA +KK+L+ VDHS + Y PFRK+FYV P
Sbjct: 326 DEGDEQGPDPDELDATDLNPEDILALAAK--KAKKKDLAAVDHSRVAYEPFRKEFYVAPP 383
Query: 144 EIARMT 149
++A MT
Sbjct: 384 DVAEMT 389
>gi|453089161|gb|EMF17201.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1160
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 33/142 (23%)
Query: 21 NGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSV 80
N +ED+DPLDAFM + ++ R A+P + + D P G+V V
Sbjct: 388 NAMAVDEDVDPLDAFMNTLEDQPRSRGH-ALPNKREPQLFDEDDGP-GLVAVG------- 438
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
++ EDL + KKE+ VDHS +EY F K+FY
Sbjct: 439 --------------------DDPEDLLRGGGK---RNKKEILPVDHSKVEYEDFAKNFYR 475
Query: 141 EVPEIARMTPEEVEKYK-EVDN 161
E E+A MT +EV + E+DN
Sbjct: 476 ESVEVAEMTEKEVATLRAELDN 497
>gi|302665308|ref|XP_003024266.1| hypothetical protein TRV_01617 [Trichophyton verrucosum HKI 0517]
gi|291188313|gb|EFE43655.1| hypothetical protein TRV_01617 [Trichophyton verrucosum HKI 0517]
Length = 1171
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 26/133 (19%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
AEE+IDPLDAFM + + + VKP+ S +++ +
Sbjct: 414 AEEEIDPLDAFMSDLKQSTSTPKQ-------SVKPSSS----------------KLQQPE 450
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
+EN ++ E + +D + A SK+KK++ V+HS I Y PFRK+FY E +
Sbjct: 451 AMFGDENDINMD-PVEPDADDFFALANK--SKRKKDIPTVNHSKINYEPFRKNFYTEPVD 507
Query: 145 IARMTPEEVEKYK 157
+A ++ EV +
Sbjct: 508 LAGLSEAEVANIR 520
>gi|413955931|gb|AFW88580.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 768
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 6 LEDDSDEDENDNKDENGKT-AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSG- 63
DD+ D +GK +E+IDPLDAFM + EE+R P ++ ADSG
Sbjct: 43 FSDDAPSDAPAGTAVDGKAEHDEEIDPLDAFMAEIQEEIRAPPPPP--KAEALRRADSGD 100
Query: 64 ------------SKPAGVVIVTGVVKK---SVEKAKGELMEENQDGLEYSSEEEQEDLTS 108
K AG+ + ++ S E+ + +EY S++
Sbjct: 101 DEDDPVESFLRAKKDAGLTLAADAMRAGYDSDEEVYAAAKAVDAGMMEYDSDD------- 153
Query: 109 TAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKY 156
+ K + + +DHSTIEY F KDFY E P I+ M+ +EV Y
Sbjct: 154 NPIVVDKKTIEPIPALDHSTIEYDTFTKDFYEEKPSISGMSDQEVADY 201
>gi|443926925|gb|ELU45471.1| DEAD/DEAH box RNA helicase [Rhizoctonia solani AG-1 IA]
Length = 1540
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 80/159 (50%), Gaps = 24/159 (15%)
Query: 5 NLE-DDSDEDENDNKDENGKT----AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
NLE +D DE E D T EE+ DPLDAFM GV EE++KVN
Sbjct: 742 NLEAEDDDEPEPMQIDSTNPTPAVEEEEEEDPLDAFMSGVKEEVKKVN------------ 789
Query: 60 ADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEY-SSEEEQEDLTSTAANLASKQK 118
A+ + AG G+ + E + +EE +D E ++E ED+ + AA A K+
Sbjct: 790 AEDRKRMAGNGEQLGITAEDAE----DDVEETRDVDELDATELRPEDILALAAKKAKKKD 845
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+ VDH I+Y PFRK FY P++A MT +E + +
Sbjct: 846 LAV--VDHDKIKYEPFRKAFYHPPPDVAAMTDDEADLLR 882
>gi|342319919|gb|EGU11864.1| Pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Rhodotorula
glutinis ATCC 204091]
Length = 1534
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+D+ + AA K+ +EL+ DHS I+YLPFRK FY PE+A ++ EE + +
Sbjct: 504 QDILALAAKKV-KKGRELAVPDHSKIDYLPFRKAFYTAPPEVASLSQEETDALR 556
>gi|115452607|ref|NP_001049904.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|122247124|sp|Q10MH8.1|RH24_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|108707754|gb|ABF95549.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|113548375|dbj|BAF11818.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|215737377|dbj|BAG96306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 770
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADS------------GSKPAGVVIVT 73
EE+IDPLDAFM + EE+R ++ ADS K +G+ +
Sbjct: 65 EEEIDPLDAFMAEIQEEIRAPPPAP--KPEALRRADSDDEDDPVESFLRAKKDSGLALAA 122
Query: 74 GVVKK---SVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE-LSKVDHSTI 129
+ S E+ + +EY S++ + K+K E + +DHSTI
Sbjct: 123 DAMHAGYDSDEEVYAAAKAVDAGMMEYDSDDN--------PIVVDKKKIEPIPPLDHSTI 174
Query: 130 EYLPFRKDFYVEVPEIARMTPEEVEKY 156
EY PF KDFY E P ++ M+ +EV Y
Sbjct: 175 EYEPFNKDFYEEKPSVSGMSEQEVADY 201
>gi|326482407|gb|EGE06417.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
equinum CBS 127.97]
Length = 1182
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 26/129 (20%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELM 88
IDPLDAFM + + + P + VKP+ S +++ +
Sbjct: 428 IDPLDAFMSDLKQST------STPKQS-VKPSSS----------------KLQQPEAMFG 464
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
+EN ++ E E +DL + A SK+KK++ V+HS I Y PFRK+FY E ++A +
Sbjct: 465 DENDINMD-PVEPEADDLFALANK--SKRKKDIPTVNHSKINYEPFRKNFYTEPVDLAGL 521
Query: 149 TPEEVEKYK 157
T EV +
Sbjct: 522 TEAEVTNIR 530
>gi|159475485|ref|XP_001695849.1| hypothetical protein CHLREDRAFT_118630 [Chlamydomonas reinhardtii]
gi|158275409|gb|EDP01186.1| predicted protein [Chlamydomonas reinhardtii]
Length = 710
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMT 149
+L VDHSTI+Y PFRK+FY+EV E+ R+T
Sbjct: 1 KLVAVDHSTIDYPPFRKNFYIEVTELTRLT 30
>gi|242041163|ref|XP_002467976.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
gi|241921830|gb|EER94974.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
Length = 766
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 24/167 (14%)
Query: 6 LEDDSDEDENDNKDENGKTAE-EDIDPLDAFMQGVHEEMRKVN--------KPAVPTTAD 56
DD+ D + GK + E+IDPLDAFM + EE+R + A +
Sbjct: 43 FSDDAPSDAPASTAVEGKAEDDEEIDPLDAFMAEIQEEIRAPPPPPKPEALRRADSDDDE 102
Query: 57 VKPADS---GSKPAGVVIVTGVVKKSV---EKAKGELMEENQDGLEYSSEEEQEDLTSTA 110
P +S K AG+ + ++ E+ + +EY S++
Sbjct: 103 DDPVESFLRAKKDAGLTLAADAMRAGYDSDEEVYAAAKAVDAGMMEYDSDDN-------- 154
Query: 111 ANLASKQKKE-LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKY 156
+ K+K E + +DHSTIEY F KDFY E P I+ M+ +EV Y
Sbjct: 155 PIVVDKKKIEPIPALDHSTIEYDAFTKDFYEEKPSISGMSDQEVADY 201
>gi|255079594|ref|XP_002503377.1| predicted protein [Micromonas sp. RCC299]
gi|226518643|gb|ACO64635.1| predicted protein [Micromonas sp. RCC299]
Length = 489
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 123 KVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
+VDHS IEY F +DFYVE PEI+ M P+ VE
Sbjct: 2 RVDHSRIEYGDFNRDFYVEAPEISSMAPDAVE 33
>gi|315042594|ref|XP_003170673.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Arthroderma
gypseum CBS 118893]
gi|311344462|gb|EFR03665.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Arthroderma
gypseum CBS 118893]
Length = 1183
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 25/133 (18%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
A+ED+DPLDAFM + + + P ++K + S +++ +
Sbjct: 425 ADEDVDPLDAFMSNLKQST------STPKQKNIKTSSS----------------KLQQPE 462
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
+EN ++ E E +D + A SK+KK++ V+HS + Y FRK+FY E +
Sbjct: 463 AMFGDENDINMD-PVEPETDDFFALANK--SKRKKDIPTVNHSKVNYESFRKNFYTEPVD 519
Query: 145 IARMTPEEVEKYK 157
+A +T EV +
Sbjct: 520 LAGLTEAEVANIR 532
>gi|380491708|emb|CCF35128.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 1206
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 28/133 (21%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E+D+DPLDAFM AD+ +D+ +KP G K S K
Sbjct: 460 EDDVDPLDAFM------------------ADL--SDAKAKPTGH-------KASTSSKKA 492
Query: 86 ELMEENQDGLEYSSE-EEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
+ E EY+ + E+ +D + A A ++KK++ VD+S ++ P RK+F+VE E
Sbjct: 493 QEPEAYFSDDEYAFKTEDGKDPNAVLAMAAKRKKKDIPTVDYSKLDLHPIRKNFWVEPAE 552
Query: 145 IARMTPEEVEKYK 157
+A +T EE + +
Sbjct: 553 LAALTEEEANELR 565
>gi|357511395|ref|XP_003625986.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355501001|gb|AES82204.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 775
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 27/147 (18%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVP-TTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGEL 87
IDPLDAFM+G+HEEM+ P D D P +S +AK +L
Sbjct: 79 IDPLDAFMEGIHEEMKSAPPPKPKEKVEDRYKDDLEDDPM----------ESFLRAKKDL 128
Query: 88 -MEENQDGLEYSSEEEQEDLTSTAA---------------NLASKQKKELSKVDHSTIEY 131
+ D L + ++E + A L K+ + ++ +DH+ I+Y
Sbjct: 129 GLTLASDALHAGYDSDEEVYAAAKAVDAGLIDYDSDDNPIVLDKKKIEPIAPLDHNEIDY 188
Query: 132 LPFRKDFYVEVPEIARMTPEEVEKYKE 158
PF KDFY E P I+ M+ ++V Y++
Sbjct: 189 EPFNKDFYEESPSISGMSEQDVIDYRK 215
>gi|226494636|ref|NP_001147596.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
gi|195612416|gb|ACG28038.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
Length = 768
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 22/166 (13%)
Query: 6 LEDDSDEDENDNKDENGKT-AEEDIDPLDAFMQGVHEEMRKVN--------KPAVPTTAD 56
DD+ D +GK +E+IDPLDAFM + EE+R + A +
Sbjct: 43 FSDDAPSDAPAGTAVDGKAEHDEEIDPLDAFMAEIQEEIRAPPPPPKAEALRRADSDDDE 102
Query: 57 VKPADS---GSKPAGVVIVTGVVKKSV---EKAKGELMEENQDGLEYSSEEEQEDLTSTA 110
P +S K AG+ + ++ E+ + +EY S++
Sbjct: 103 DDPVESFLRAKKDAGLTLAADAMRAGYDSDEEVYAAAKAVDAGMMEYDSDD-------NP 155
Query: 111 ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKY 156
+ K + + +DHSTIEY F KDFY E P I+ M+ +EV Y
Sbjct: 156 IVVDKKTIEPIPALDHSTIEYDTFTKDFYEEKPSISGMSDQEVADY 201
>gi|167379102|ref|XP_001734993.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903186|gb|EDR28830.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 104 EDLTSTAANLAS--KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
EDLT LA K+K EL VDH I+Y P K YVEVP+I ++T EEV++ +
Sbjct: 60 EDLTDYKDELAQIKKKKLELLDVDHKNIQYEPIHKALYVEVPDIKKLTKEEVKEIR 115
>gi|327351907|gb|EGE80764.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1205
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 24/132 (18%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+ DPLDAFM G+ E +A + A +G T K + K +
Sbjct: 447 EEETDPLDAFMSGLAE------------SAAAQDARNG---------TNFSKLKLPKPEA 485
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+E+ L+ E + L T+ +++KK+L ++H + Y PFRKDFY E ++
Sbjct: 486 IFGDEDDVDLKAIDPEADDFLAITSK---ARKKKDLPPINHEKMNYEPFRKDFYTEPVDL 542
Query: 146 ARMTPEEVEKYK 157
+ +T EEV +
Sbjct: 543 SELTDEEVAALR 554
>gi|239613405|gb|EEQ90392.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis ER-3]
Length = 1197
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 24/132 (18%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+ DPLDAFM G+ E +A + A +G T K + K +
Sbjct: 439 EEETDPLDAFMSGLAE------------SAAAQDARNG---------TNFSKLKLPKPEA 477
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+E+ L+ E + L T+ +++KK+L ++H + Y PFRKDFY E ++
Sbjct: 478 IFGDEDDVDLKAIDPEADDFLAITSK---ARKKKDLPPINHEKMNYEPFRKDFYTEPVDL 534
Query: 146 ARMTPEEVEKYK 157
+ +T EEV +
Sbjct: 535 SELTDEEVAALR 546
>gi|261194749|ref|XP_002623779.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis SLH14081]
gi|239588317|gb|EEQ70960.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis SLH14081]
Length = 1197
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 24/132 (18%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+ DPLDAFM G+ E +A + A +G T K + K +
Sbjct: 439 EEETDPLDAFMSGLAE------------SAAAQDARNG---------TNFSKFKLPKPEA 477
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+E+ L+ E + L T+ +++KK+L ++H + Y PFRKDFY E ++
Sbjct: 478 IFGDEDDVDLKAIDPEADDFLAITSK---ARKKKDLPPINHEKMNYEPFRKDFYTEPVDL 534
Query: 146 ARMTPEEVEKYK 157
+ +T EEV +
Sbjct: 535 SELTDEEVAALR 546
>gi|407041039|gb|EKE40492.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 716
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 104 EDLTSTAANLAS--KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVD 160
EDL LA K+K EL VDH I+Y P K YVEVP+I ++T EEV++ + V+
Sbjct: 60 EDLADYKDELAQIKKKKLELLDVDHKNIQYEPIHKALYVEVPDIKKLTKEEVKEIRRVE 118
>gi|302502646|ref|XP_003013284.1| hypothetical protein ARB_00469 [Arthroderma benhamiae CBS 112371]
gi|291176847|gb|EFE32644.1| hypothetical protein ARB_00469 [Arthroderma benhamiae CBS 112371]
Length = 1181
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 26/129 (20%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELM 88
IDPLDAFM + + + A P+++ ++ +P E G+
Sbjct: 405 IDPLDAFMSDLKQSTSTPKQSAKPSSSKLQ------QP--------------EAMFGDEN 444
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
+ N D +E E +D + A SK+KK++ V+HS I Y PFRK+FY E ++A +
Sbjct: 445 DINMDPVE----PEADDFFALANK--SKRKKDIPTVNHSKINYEPFRKNFYTEPVDLAGL 498
Query: 149 TPEEVEKYK 157
T EV +
Sbjct: 499 TEAEVANIR 507
>gi|156083314|ref|XP_001609141.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796391|gb|EDO05573.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 994
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 29/160 (18%)
Query: 28 DIDPLDAFMQGVHEEMRK-VNKPAVPTTADVKPADSGSKPAGVVI--------------- 71
D+DPL+ +MQ + +E K + + + D D V +
Sbjct: 218 DVDPLEFYMQNILKESEKDIQQVQLDPIIDPNAIDHSDVGKSVTLDEIMAMSHEEEQTDE 277
Query: 72 -----VTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTA-----ANLASKQKKEL 121
V+++ K + ++ +E D SS+E++ + S ++ + E+
Sbjct: 278 QQEKEFVSVLRR---KTRKDVKKEGHDDGVISSDEDKPEPNSNVDYSELFKGTTRSRIEM 334
Query: 122 SKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVDN 161
KVDHSTI+Y PF+K+FYV++ I M EVE +++ +
Sbjct: 335 PKVDHSTIDYQPFKKNFYVQISAITAMKEHEVEAFRKANG 374
>gi|358054949|dbj|GAA99016.1| hypothetical protein E5Q_05705 [Mixia osmundae IAM 14324]
Length = 1170
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 15/127 (11%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
+++IDPLDAFM GV E++++VN +D+ + G+ P V + + + +
Sbjct: 405 DDEIDPLDAFMTGVTEQVKQVN------ASDIARSLGGAPPPKEETVMNLDEDAGDDDGE 458
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
E + GL ED+ + AA +KK+L+ VDHS I+Y FRK FY PEI
Sbjct: 459 P-DEYEKAGLR------PEDILALAAK--KLKKKDLAPVDHSRIKYESFRKAFYHPPPEI 509
Query: 146 ARMTPEE 152
A MT EE
Sbjct: 510 AAMTEEE 516
>gi|116207046|ref|XP_001229332.1| hypothetical protein CHGG_02816 [Chaetomium globosum CBS 148.51]
gi|118597490|sp|Q2HAD8.1|PRP5_CHAGB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|88183413|gb|EAQ90881.1| hypothetical protein CHGG_02816 [Chaetomium globosum CBS 148.51]
Length = 1064
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 23/128 (17%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
+ED+DPLDAFM + + +VP K A G +P
Sbjct: 303 DEDVDPLDAFMADLEQTGSAGGIGSVPARQKQK-AGKGFEP------------------- 342
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
E + D Y EE++ D +S A + K+KK++ +D+S IE RK+F+VE E+
Sbjct: 343 EAYFSDDD---YGYEEDKADPSSILAMASKKKKKDIPTIDYSKIELNQIRKNFWVEPQEL 399
Query: 146 ARMTPEEV 153
++MT +++
Sbjct: 400 SQMTEDDI 407
>gi|302835930|ref|XP_002949526.1| hypothetical protein VOLCADRAFT_59325 [Volvox carteri f.
nagariensis]
gi|300265353|gb|EFJ49545.1| hypothetical protein VOLCADRAFT_59325 [Volvox carteri f.
nagariensis]
Length = 722
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 109 TAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMT-PEEVEKYKEVD 160
T+ L+ +K L VDHSTI Y PFRK+FY+EV E+ ++ E E KE+D
Sbjct: 9 TSGKLSKGEK--LVAVDHSTINYAPFRKNFYIEVAELTKLNDAERAELRKEMD 59
>gi|291241720|ref|XP_002740759.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Saccoglossus kowalevskii]
Length = 1091
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
Query: 131 YLPFRKDFYVEVPEIARMTPEEVEKYK-EVDN 161
Y PFR+DFYVEVPEIA+MT E+V Y+ E++N
Sbjct: 380 YPPFRRDFYVEVPEIAKMTEEDVISYRAELEN 411
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 7 EDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVN 47
E+ DEDE K E K ++D+DPLDAFMQGV++E+R++N
Sbjct: 322 ENGKDEDE---KMETKKEEDDDVDPLDAFMQGVNDEVRQIN 359
>gi|328869186|gb|EGG17564.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 923
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 42/193 (21%)
Query: 3 KWNLEDDSDEDENDNKDE-------------NGKTAEEDIDPLDAFMQGV---------- 39
KWNLED+ ED N + K E+D DPLDA+M +
Sbjct: 238 KWNLEDEDQEDTNAAAAAAAAAAAAKAAAAASSKMEEDDEDPLDAYMNQLAKKEYQQTQQ 297
Query: 40 ---------------HEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
++ ++ N+ TT + S P I G + K
Sbjct: 298 KQEQIKQQNEQLQEQLKQQQEKNENGDNTTTVAMDTAAASPPIKTTITIG----PISIPK 353
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GE++ + + E++ E + + K KKE+ DHS +Y+ F+KDFYVEVP
Sbjct: 354 GEVLGNDGELDGEEEEDDDEGIENGEEKEVKKGKKEILSTDHSKEDYIEFQKDFYVEVPT 413
Query: 145 IARMTPEEVEKYK 157
++ MT EV+ Y+
Sbjct: 414 LSNMTETEVKDYR 426
>gi|19075356|ref|NP_587856.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces pombe 972h-]
gi|48474674|sp|Q9P7C7.1|PRP11_SCHPO RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp11
gi|7380876|emb|CAB85446.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces pombe]
Length = 1014
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 35/161 (21%)
Query: 2 KKWNLEDDSD----EDENDNKDENGKTAEED-IDPLDAFMQGVHEEMRKVNKPAVPTTAD 56
++ NLED + ED +E + EED +DPLDA+M + V TT
Sbjct: 270 RRMNLEDYQELWDQEDRGMLGNEQAASMEEDEVDPLDAYMASL-----------VGTTDT 318
Query: 57 VKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASK 116
++P ++ T V+ + N D SE +E+ A
Sbjct: 319 IRPG---------LLNTEVIDPNA----------NDDERMVISETLEEEENLLALAAKRS 359
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+KK++ VDHS I Y F+KDFYVE E+ ++P EV++ +
Sbjct: 360 KKKDVITVDHSKINYEDFKKDFYVEPEELKNLSPAEVDELR 400
>gi|303324443|ref|XP_003072209.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240111919|gb|EER30064.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 1197
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 31/135 (22%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+IDPLDAFM G+ + V + +K+V K K
Sbjct: 435 EEEIDPLDAFMSGLKDS--------------------------VTVDASKYRKNVSKPKQ 468
Query: 86 E--LMEENQDGLEYSSEE-EQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEV 142
E + ++D ++ + + E +D + + +++KK+L V+H I+Y PFRK FY E
Sbjct: 469 EPEAIFGDEDDVDLKAMDFEADDFLAITSK--TRKKKDLPTVNHEKIDYEPFRKSFYTEP 526
Query: 143 PEIARMTPEEVEKYK 157
++A + EEV +
Sbjct: 527 VDLAELNDEEVAALR 541
>gi|378729404|gb|EHY55863.1| hypothetical protein HMPREF1120_03978 [Exophiala dermatitidis
NIH/UT8656]
Length = 1216
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 24/141 (17%)
Query: 22 GKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVE 81
G+ ED+DPLDAFMQ + E D K SK KS +
Sbjct: 447 GQAENEDVDPLDAFMQELQPER------------DTKSFGQKSK-----------AKSRQ 483
Query: 82 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 141
+ L ++ ++ +++ S A+ A K+KK++ V+H+ ++Y PFR++FY E
Sbjct: 484 QEPEALFSDDDVDFTAVDDDNPDNILSLASANAKKKKKDIPTVNHAKMQYEPFRRNFYSE 543
Query: 142 VPEIARMTPEEVEKYK-EVDN 161
E+A T E+V + E+DN
Sbjct: 544 PIEMAEWTEEDVAALRMELDN 564
>gi|427788695|gb|JAA59799.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 870
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 11 DEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVV 70
DE ++ K +N +EED PLDA+M + +++ K +KP++ + ++ SK
Sbjct: 105 DEQQHREKQQNSSDSEED--PLDAYMADIQKKLEK-DKPSISKNSKTPEKETKSKDELKG 161
Query: 71 IVTGVVKKSVEKAKGELMEEN----QDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDH 126
+ + + E++ +EEN D + E E ++ + A + SK L +DH
Sbjct: 162 VRDDIENEDDEESYYRYIEENPNAGADKDDSDVELEYDEDGNPIAPVKSKYIDPLPPIDH 221
Query: 127 STIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
STIEY F K+FYVE EIA ++ EV++ +
Sbjct: 222 STIEYKEFTKNFYVEHEEIAALSDAEVDQLR 252
>gi|302922639|ref|XP_003053509.1| hypothetical protein NECHADRAFT_74731 [Nectria haematococca mpVI
77-13-4]
gi|256734450|gb|EEU47796.1| hypothetical protein NECHADRAFT_74731 [Nectria haematococca mpVI
77-13-4]
Length = 1201
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 36/132 (27%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E+D+DPLDAFM AD+K + VKK + +K
Sbjct: 482 EDDVDPLDAFM------------------ADLKQTE--------------VKKPAKTSKT 509
Query: 86 ELMEENQDGL---EYS-SEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 141
+ ++E + EY+ ++EE D + A A ++KK++ +D++ +E P RK+F+VE
Sbjct: 510 QKVQEPEAYFSDDEYNFNKEENGDPNALLAMTAKRKKKDIPTIDYTKVEIQPIRKNFWVE 569
Query: 142 VPEIARMTPEEV 153
E++++T EV
Sbjct: 570 PAELSQLTETEV 581
>gi|449549675|gb|EMD40640.1| hypothetical protein CERSUDRAFT_80293 [Ceriporiopsis subvermispora
B]
Length = 877
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 30/135 (22%)
Query: 31 PLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEE 90
PLDAFM GV EE++KVN D+K + G V+ A E+
Sbjct: 93 PLDAFMSGVKEEVKKVN------LEDLKKMKTNG--------NGRVRLDNAAA-----ED 133
Query: 91 NQDGLEYSSEEEQEDLTSTAAN--------LASKQKKELSKVDHSTIEYLPFRKDFYVEV 142
N D +E E ++L +T N +KK+L+ +DHS I+Y PFRK+FY
Sbjct: 134 NYDDVE---GPEVDELDATDLNPEDILALAAKKAKKKDLAAIDHSRIKYEPFRKEFYTAP 190
Query: 143 PEIARMTPEEVEKYK 157
P+IA MT +E + +
Sbjct: 191 PDIAEMTDDEADLLR 205
>gi|320037247|gb|EFW19185.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coccidioides
posadasii str. Silveira]
Length = 853
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 31/135 (22%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+IDPLDAFM G+ + V + +K+V K K
Sbjct: 91 EEEIDPLDAFMSGLKDS--------------------------VTVDASKYRKNVSKPKQ 124
Query: 86 E--LMEENQDGLEYSSEE-EQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEV 142
E + ++D ++ + + E +D + + +++KK+L V+H I+Y PFRK FY E
Sbjct: 125 EPEAIFGDEDDVDLKAMDFEADDFLAITSK--TRKKKDLPTVNHEKIDYEPFRKSFYTEP 182
Query: 143 PEIARMTPEEVEKYK 157
++A + EEV +
Sbjct: 183 VDLAELNDEEVAALR 197
>gi|448100355|ref|XP_004199330.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
gi|359380752|emb|CCE82993.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
Length = 900
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
Query: 113 LASKQKK------ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
L+SK KK EL+ V+HS I+Y PFRKDFY E EIA MT EV+
Sbjct: 235 LSSKLKKFHNKEIELNDVNHSEIDYKPFRKDFYKEPKEIADMTEAEVD 282
>gi|340521284|gb|EGR51519.1| predicted protein [Trichoderma reesei QM6a]
Length = 1247
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 27/145 (18%)
Query: 9 DSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAG 68
+S E D D +G+ +EDIDPLDAFM G+ +++ +V P
Sbjct: 479 ESQEAPADAMDVDGE--DEDIDPLDAFMDGL-QQIEEVKNP------------------- 516
Query: 69 VVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHST 128
V T + KK E + D ++ + +QE + A ++KK++ VD+S
Sbjct: 517 -VKTTSIAKKQQEPE----AYFSDDDYAFNEQGDQEADAALLAIANKRKKKDIPTVDYSK 571
Query: 129 IEYLPFRKDFYVEVPEIARMTPEEV 153
++ P RK+F+VE E++ ++ EV
Sbjct: 572 LDLQPIRKNFWVEPAELSNLSEAEV 596
>gi|302815223|ref|XP_002989293.1| hypothetical protein SELMODRAFT_129678 [Selaginella moellendorffii]
gi|300142871|gb|EFJ09567.1| hypothetical protein SELMODRAFT_129678 [Selaginella moellendorffii]
Length = 209
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+L+ VDH+ + Y FRKDFY EV EI RM+ E+V Y++
Sbjct: 80 KLAVVDHTKVPYTSFRKDFYKEVKEIQRMSKEDVTAYRK 118
>gi|290972392|ref|XP_002668937.1| predicted protein [Naegleria gruberi]
gi|284082475|gb|EFC36193.1| predicted protein [Naegleria gruberi]
Length = 898
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 21 NGKTAEEDIDPLDAFMQGVHEEMRKVNKP-------AVPTTADVKPADSGSKPAGVVI-- 71
N ++++ D L+ +M +H E+++ KP D+ ++ ++ V+
Sbjct: 230 NTNMSDDEDDDLEKYMSSIHSELKQSEKPKEIDNGTLSNENTDLNSSEIRNQKGQVLFSD 289
Query: 72 -VTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIE 130
V S AK ++ N +GL + + KK+L +VDHS +E
Sbjct: 290 DTDDVDLDSYFIAKDDITNRNLEGL---------------SEFQKQSKKDLKQVDHSKME 334
Query: 131 YLPFRKDFYVEVPEIARMTPEEV-EKYKEVDN 161
YLPFRK+F++ E A M+ ++ E KE+ N
Sbjct: 335 YLPFRKNFFIVPREYANMSENDIAELRKEMGN 366
>gi|327292871|ref|XP_003231133.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
rubrum CBS 118892]
gi|326466763|gb|EGD92216.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
rubrum CBS 118892]
Length = 1180
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 26/129 (20%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELM 88
+DPLDAFM + + + P + VKP+ S +++ +
Sbjct: 427 VDPLDAFMSDLKQST------STPKQS-VKPSSS----------------KLQQPEAIFG 463
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
+EN ++ E E +D + A SK+KK++ V+HS I Y PFRK+FY E ++A +
Sbjct: 464 DENDINMD-PVEPEADDFFALANK--SKRKKDIPTVNHSKINYEPFRKNFYTEPVDLAGL 520
Query: 149 TPEEVEKYK 157
T EV +
Sbjct: 521 TEAEVANIR 529
>gi|256052028|ref|XP_002569581.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646171|emb|CCD59155.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 840
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEK-----AK 84
DPLD FM G++EE+R ++ T K ++S K + GV + +E+ +
Sbjct: 149 DPLDQFMAGINEEVRTLHSGEKSVT---KESNSKGKKSTKGDGKGV-RDDIEQEDEIESY 204
Query: 85 GELMEEN-QDGLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFYV 140
MEEN GL EEE + + N+ +KK L +DHS I Y PF K+FYV
Sbjct: 205 LRFMEENPHLGLPGDDEEEVYEYDADG-NIIGTEKKTIDPLPPIDHSMINYAPFAKNFYV 263
Query: 141 EVPEIARM 148
E EI+ +
Sbjct: 264 EHVEISSL 271
>gi|345487283|ref|XP_001603249.2| PREDICTED: ATP-dependent RNA helicase DDX42-like [Nasonia
vitripennis]
Length = 793
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 13 DENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIV 72
+E+ NK++ + ++ + DPLDAFM G+ E+ + P+V + K I
Sbjct: 99 EEHINKNKKKEDSDSEEDPLDAFMAGIESEIERTKAPSVEDRKEEKTKG---------IR 149
Query: 73 TGVVKKSVEKAKGELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHST 128
+ + E++ MEEN + GL +++ + +A +KKE L +DHS
Sbjct: 150 ADIDGEDDEESYYRYMEENPNAGLHLDDSDQEIEYDEDGNPIAPLKKKEIDPLPPIDHSV 209
Query: 129 IEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
I Y PF K+FY +IA + +++++ ++
Sbjct: 210 IPYEPFEKNFYNVHEDIANLNKQQIDELRK 239
>gi|296807861|ref|XP_002844269.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Arthroderma
otae CBS 113480]
gi|238843752|gb|EEQ33414.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Arthroderma
otae CBS 113480]
Length = 1183
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELM 88
IDPLDAFM +D+K S K G+ + + + E G+
Sbjct: 429 IDPLDAFM------------------SDLKQNTSTPKQKGIK-SSNLKHQQPEAIFGDEN 469
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
+ N D +E E ED + A+ SK+KKE+ ++HS + Y PFRK FY E ++A +
Sbjct: 470 DINMDPIE----PEAEDFLALASK--SKRKKEIPSINHSKMNYEPFRKAFYTEPVDLAGL 523
Query: 149 TPEEVEKYK 157
+ EV +
Sbjct: 524 SEAEVANIR 532
>gi|448104053|ref|XP_004200189.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
gi|359381611|emb|CCE82070.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
Length = 900
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
Query: 113 LASKQKK------ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
L+SK KK EL+ V+HS I+Y PFRKDFY E EIA MT E++
Sbjct: 235 LSSKLKKFQNKEIELNDVNHSEIDYKPFRKDFYKEPKEIADMTEAEID 282
>gi|213405989|ref|XP_002173766.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces japonicus
yFS275]
gi|212001813|gb|EEB07473.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces japonicus
yFS275]
Length = 1056
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 34/153 (22%)
Query: 7 EDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKP 66
EDD + D G + + ++DPLDA+M
Sbjct: 321 EDDDSAMDTDGAAVPGNSHDNEVDPLDAYM------------------------------ 350
Query: 67 AGVVIVTGVVKKSVEKAKGELMEENQDGL--EYSSEEEQEDLTSTAANLASKQKKELSKV 124
A + VT VV+ + A+ ++D L + ++ E+E++ + AA +KK+ V
Sbjct: 351 ASLEGVTDVVRPGLLNAEVVDGTNDEDDLYEQSTTLAEEENILALAAK--RMKKKDFITV 408
Query: 125 DHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
DHS I Y FRK+FYVE E+ +++ EEV++ +
Sbjct: 409 DHSKINYEDFRKNFYVEPEELKKLSLEEVDELR 441
>gi|449305030|gb|EMD01037.1| hypothetical protein BAUCODRAFT_82013 [Baudoinia compniacensis UAMH
10762]
Length = 853
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 97 YSSEEEQEDLTSTAANL-------ASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMT 149
+++ +++ DL + N A ++KKE+ VDHS IEY PFRK FY E E++ +T
Sbjct: 118 FNNSDDEADLDAVGQNTDDILAIAAKRKKKEIPTVDHSKIEYEPFRKAFYNESVELSDLT 177
Query: 150 PEEVEKYK-EVDN 161
++ + + E+DN
Sbjct: 178 EDDTDMLRAELDN 190
>gi|212542881|ref|XP_002151595.1| DEAD/DEAH box RNA helicase [Talaromyces marneffei ATCC 18224]
gi|210066502|gb|EEA20595.1| DEAD/DEAH box RNA helicase [Talaromyces marneffei ATCC 18224]
Length = 1207
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 27/131 (20%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELM 88
IDPLDAFM G+ E KP+ + +K A S ++ + + M
Sbjct: 452 IDPLDAFMSGLTE------KPSFKKPSIIKSAKS------------------KQQQPQAM 487
Query: 89 EENQDGLEYSS--EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIA 146
++D ++ S+ + +D + AAN +K+KK++ VDH+ EY PFRK FY E ++A
Sbjct: 488 FGDEDDIDMSAVAHGDTDDFLAIAAN-KAKKKKDIPTVDHAKAEYEPFRKSFYTEPLDLA 546
Query: 147 RMTPEEVEKYK 157
+MT EEV +
Sbjct: 547 QMTEEEVASLR 557
>gi|367042554|ref|XP_003651657.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
gi|346998919|gb|AEO65321.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
Length = 1193
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EED+DPLDAFM + T V GSKP K S KG
Sbjct: 434 EEDVDPLDAFMADLEH---------TGTAGGV-----GSKPP---------KPSQNAKKG 470
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
E +Y E + D S A A K+KK++ VD+S IE P RK+F+VE E+
Sbjct: 471 FEPEAYFSEDDYGFEADNADPASILAMAAKKKKKDIPTVDYSKIELNPIRKNFWVEPQEL 530
Query: 146 ARMTPEEV 153
++MT EE
Sbjct: 531 SQMTEEEA 538
>gi|358335302|dbj|GAA53830.1| ATP-dependent RNA helicase DDX42 [Clonorchis sinensis]
Length = 557
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 31 PLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEE 90
PLD +M+ + EE+R ++ KPA +K I + ++ ++ MEE
Sbjct: 148 PLDKYMENIEEEVRTLDYAPPNKPGSKKPAKGNTKG----IRDDIEQEDAVESYLRFMEE 203
Query: 91 NQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVEVPEIAR 147
N + +EE+ N+ +KK L VDHS I+Y PF K+FY+E EI
Sbjct: 204 NPHLGLHMDDEEEAYEYDAEGNIIGTEKKMIDPLPPVDHSVIKYAPFAKNFYIEHEEITN 263
Query: 148 MTPEEVEKYKE 158
++ V + +E
Sbjct: 264 LSEANVAELRE 274
>gi|310790963|gb|EFQ26496.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 1112
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 28/133 (21%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E+D+DPLDAFM AD+ +D+ ++P V+ K V++ +
Sbjct: 366 EDDVDPLDAFM------------------ADL--SDTKAQP--TVLQASTSSKKVQEPEA 403
Query: 86 ELMEENQDGLEYSSE-EEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
+++ Y+ + E+ +D + A A ++KK++ VD+S ++ P RK+F+VE E
Sbjct: 404 YFSDDD-----YALKTEDGKDPNAVLAMAAKRKKKDIPTVDYSKLDLHPIRKNFWVEPAE 458
Query: 145 IARMTPEEVEKYK 157
+A +T EE + +
Sbjct: 459 LAALTEEEANELR 471
>gi|294875381|ref|XP_002767294.1| RNA helicase-1, putative [Perkinsus marinus ATCC 50983]
gi|239868857|gb|EER00012.1| RNA helicase-1, putative [Perkinsus marinus ATCC 50983]
Length = 1227
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQ---KKELSKVDHSTIEYLPFRKDFYVEVPEI 145
E+N+ + E +++D++ + +KQ KKEL VDHS IEY P +K+ Y +V EI
Sbjct: 407 EKNKTAIVVKPEIKEDDISRMSYFELAKQFVSKKELPPVDHSKIEYYPIKKNLYKQVREI 466
Query: 146 ARMTPEEVEKYKE 158
+ M EV + ++
Sbjct: 467 SNMPEHEVAQLRQ 479
>gi|429848197|gb|ELA23711.1| pre-mRNA-processing atp-dependent rna helicase prp5 [Colletotrichum
gloeosporioides Nara gc5]
Length = 1165
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 28/124 (22%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E+++DPLDAFM + D KP KPA T K V++ +
Sbjct: 446 EDEVDPLDAFMADL----------------DTKP-----KPAAPKASTS--SKKVQEPEA 482
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+++ Y+ + E +D + A A ++KK++ +D+S ++ P RK+F+VE E+
Sbjct: 483 YFSDDD-----YAFKAEDKDANAILAMAAKRKKKDIPTIDYSKLDLQPIRKNFWVEPAEL 537
Query: 146 ARMT 149
A +T
Sbjct: 538 AALT 541
>gi|356572801|ref|XP_003554554.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 768
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 34 AFMQGVHEEMRKVNKP------AVPTTADVKPADS---GSKPAGVVIVTGVVKKSV---E 81
AFM+G+HEEMR P D P +S K G+ + + + E
Sbjct: 81 AFMEGIHEEMRAAPPPKEKAEDRYRDDEDDDPLESFLKAKKDLGLTLASDALHAGYDSDE 140
Query: 82 KAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 141
+ + +EY S++ + K+ + + +DHS+I+Y PF KDFY E
Sbjct: 141 EVYAAAKAVDAGMIEYDSDDN-------PIVIDKKKIEPIPALDHSSIDYEPFNKDFYEE 193
Query: 142 VPEIARMTPEEVEKYKE 158
P I+ M+ ++V +Y++
Sbjct: 194 TPSISGMSEQDVSEYRK 210
>gi|224086197|ref|XP_002193200.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Taeniopygia guttata]
Length = 923
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS IEY PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDE 220
Query: 142 VPEIARMTPEEV 153
EI +TP++V
Sbjct: 221 HEEITSLTPQQV 232
>gi|326934003|ref|XP_003213086.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Meleagris
gallopavo]
Length = 944
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS IEY PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDE 220
Query: 142 VPEIARMTPEEV 153
EI +TP++V
Sbjct: 221 HEEITSLTPQQV 232
>gi|71896321|ref|NP_001026097.1| ATP-dependent RNA helicase DDX42 [Gallus gallus]
gi|82194905|sp|Q5F485.1|DDX42_CHICK RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|60098437|emb|CAH65049.1| hypothetical protein RCJMB04_2e15 [Gallus gallus]
Length = 944
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS IEY PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDE 220
Query: 142 VPEIARMTPEEV 153
EI +TP++V
Sbjct: 221 HEEITSLTPQQV 232
>gi|225559706|gb|EEH07988.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
capsulatus G186AR]
Length = 1201
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 24/132 (18%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+ DPLDAFM G+ E A G T K + K +
Sbjct: 441 EEETDPLDAFMSGLAESA---------------AAQHGRNK------TNFSKSQLSKPEA 479
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+E+ ++ E + L T+ ++KK+L V+H + Y PFRK+FY E ++
Sbjct: 480 IFGDEDDIDMKAIDPEADDFLAITSKG---RKKKDLPPVNHEKMNYEPFRKNFYTEPVDL 536
Query: 146 ARMTPEEVEKYK 157
A +T EEV +
Sbjct: 537 AELTEEEVAALR 548
>gi|345319068|ref|XP_003430097.1| PREDICTED: ATP-dependent RNA helicase DDX42, partial
[Ornithorhynchus anatinus]
Length = 717
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS IEY PF K+FY E
Sbjct: 139 GVVPEEEEDNLEYDSD----------GNPIAPSKKVIDPLPPIDHSEIEYPPFEKNFYNE 188
Query: 142 VPEIARMTPEEV 153
EI+ +TP++V
Sbjct: 189 HEEISGLTPQQV 200
>gi|242767802|ref|XP_002341440.1| DEAD/DEAH box RNA helicase [Talaromyces stipitatus ATCC 10500]
gi|218724636|gb|EED24053.1| DEAD/DEAH box RNA helicase [Talaromyces stipitatus ATCC 10500]
Length = 1175
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 24/129 (18%)
Query: 29 IDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELM 88
IDPLDAFM G+ E+ +S KP+ +T K +++ +
Sbjct: 420 IDPLDAFMSGLAEK------------------NSFKKPS----MTKSAKSKLQQPEAIFG 457
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
+E+ + + + +D + A +K+KK++ VDH+ EY PFRK FY E ++A+M
Sbjct: 458 DEDDIDMSAVAHGDTDDFLAIANK--AKKKKDIPTVDHTKTEYEPFRKSFYTEPLDLAQM 515
Query: 149 TPEEVEKYK 157
T E+V +
Sbjct: 516 TEEDVASLR 524
>gi|240280856|gb|EER44360.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Ajellomyces
capsulatus H143]
Length = 1200
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 24/132 (18%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+ DPLDAFM G+ E A G T K + K +
Sbjct: 439 EEETDPLDAFMSGLAESA---------------AAQHGRNK------TNFSKSKLSKPEA 477
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+E+ ++ E + L T+ ++KK+L V+H + Y PFRK+FY E ++
Sbjct: 478 IFGDEDDIDMKAIDPEADDFLAITSKG---RKKKDLPPVNHEKMNYEPFRKNFYTEPVDL 534
Query: 146 ARMTPEEVEKYK 157
A +T EEV +
Sbjct: 535 AELTEEEVAALR 546
>gi|361130681|gb|EHL02431.1| putative Pre-mRNA-processing ATP-dependent RNA helicase prp5
[Glarea lozoyensis 74030]
Length = 1084
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 29/130 (22%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGE 86
+++DPLDA+M + + A PT TG KS K + +
Sbjct: 329 DEVDPLDAYMDAMGDPF------AAPTN------------------TGFFNKSQGKIRQQ 364
Query: 87 LMEE--NQDGLEYSS-EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
E D +E + E + +D+ + A+ S++KKEL +++S I+ PFRK+FY E
Sbjct: 365 EPEALFGDDDVELKAIEADPDDILAMASK--SRKKKELPTINYSKIDLEPFRKNFYTEPA 422
Query: 144 EIARMTPEEV 153
E+A MT E+
Sbjct: 423 ELADMTETEL 432
>gi|430814732|emb|CCJ28079.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 1017
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 113 LASKQ--KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
LA K+ K+EL +DHS I+Y RK+FYVE E+A M+ E+V Y+
Sbjct: 261 LAQKKLKKRELPNIDHSKIQYEHIRKNFYVEPHELAEMSEEKVNDYR 307
>gi|322799398|gb|EFZ20748.1| hypothetical protein SINV_08125 [Solenopsis invicta]
Length = 764
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 26/163 (15%)
Query: 1 MKKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
MKK +DDSD +E D LDAFM G+ E+++ N A +
Sbjct: 99 MKKSATKDDSDSEE---------------DTLDAFMAGIDAEVKRNNCAA-------QRG 136
Query: 61 DSGSKPAGVVIVTGVVKKSVEKAKGELMEEN-QDGLEYSSEEEQEDLTSTAANLASKQKK 119
D+ + I + + E++ MEEN GL+ +++ + +A +KK
Sbjct: 137 DNHKEDKSKGIRADIDGEDDEESYYRYMEENPTAGLQQEESDQEIEYDEDGNPIAPPKKK 196
Query: 120 E---LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
E L +DHS IEY PF K+FY EIA ++ ++++ K+
Sbjct: 197 EIDPLPPIDHSEIEYEPFEKNFYNVHEEIASLSKQQIDDLKKT 239
>gi|325089715|gb|EGC43025.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Ajellomyces
capsulatus H88]
Length = 1199
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 24/132 (18%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+ DPLDAFM G+ E A G T K + K +
Sbjct: 439 EEETDPLDAFMSGLAESA---------------AAQHGRNK------TNFSKSKLSKPEA 477
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+E+ ++ E + L T+ ++KK+L V+H + Y PFRK+FY E ++
Sbjct: 478 IFGDEDDIDMKAIDPEADDFLAITSKG---RKKKDLPPVNHEKMNYEPFRKNFYTEPVDL 534
Query: 146 ARMTPEEVEKYK 157
A +T EEV +
Sbjct: 535 AELTEEEVAALR 546
>gi|334322878|ref|XP_003340311.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Monodelphis
domestica]
Length = 730
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GMVQEEEEDNLEYDSD----------GNPIAPSKKVIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP++V
Sbjct: 221 HEEITSLTPQQV 232
>gi|224002607|ref|XP_002290975.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972751|gb|EED91082.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 681
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
+KKEL VDH++IEYL RK+ Y+ +A+++P EV
Sbjct: 3 KKKELRAVDHASIEYLTVRKNLYIVPQSLAKLSPLEV 39
>gi|340992734|gb|EGS23289.1| hypothetical protein CTHT_0009560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1198
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 32/136 (23%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE++DPLDAFM + + TA+ + +VK+S +A+
Sbjct: 452 EEELDPLDAFMANLEQT----------NTAEDR----------------MVKRSQAQAEK 485
Query: 86 ELMEE----NQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 141
+ E + D +Y E E D ++ A A K+KK++ +D+S IE P RK+F+VE
Sbjct: 486 KAFEPEAYFSDD--DYGYEAENADPSAILAMAAKKKKKDIPTIDYSKIELNPVRKNFWVE 543
Query: 142 VPEIARMTPEEVEKYK 157
E+A+MT EEV + +
Sbjct: 544 PQELAQMTEEEVAELR 559
>gi|395532890|ref|XP_003768499.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Sarcophilus harrisii]
Length = 943
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GMVQEEEEDNLEYDSD----------GNPIAPSKKVIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP++V
Sbjct: 221 HEEITSLTPQQV 232
>gi|403418136|emb|CCM04836.1| predicted protein [Fibroporia radiculosa]
Length = 1002
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 25/133 (18%)
Query: 31 PLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEE 90
PLDAFM GV EE++KVN D+K S + + LM+E
Sbjct: 213 PLDAFMSGVKEEVKKVN------MEDLKKLKVNSNGSA-------------RLDSNLMDE 253
Query: 91 NQDGLEYSSEEEQEDLTST------AANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
D E ++ D T A +KK+L+ VDH+ + Y FRK+FY+ P+
Sbjct: 254 GPDDAAEGPEIDELDATDLNPEDILALAAKKAKKKDLAAVDHTRVHYELFRKEFYIAPPD 313
Query: 145 IARMTPEEVEKYK 157
+A M+ EE + +
Sbjct: 314 VAAMSDEEADLLR 326
>gi|222624792|gb|EEE58924.1| hypothetical protein OsJ_10575 [Oryza sativa Japonica Group]
Length = 696
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKY 156
K+ + + +DHSTIEY PF KDFY E P ++ M+ +EV Y
Sbjct: 87 KKIEPIPPLDHSTIEYEPFNKDFYEEKPSVSGMSEQEVADY 127
>gi|118359808|ref|XP_001013142.1| CLN3 protein [Tetrahymena thermophila]
gi|89294909|gb|EAR92897.1| CLN3 protein [Tetrahymena thermophila SB210]
Length = 1138
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 113 LASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ K + L +VDHS+I+Y F K+FY E P+I ++T ++VEK ++
Sbjct: 1 MKKKNFQLLEQVDHSSIKYEAFTKNFYQEHPDITKLTEQQVEKIRK 46
>gi|225682788|gb|EEH21072.1| pre-mRNA-processing ATP-dependent RNA helicase prp5
[Paracoccidioides brasiliensis Pb03]
Length = 1203
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME 89
DPLDAFM G+ E P +G A K S K + E +
Sbjct: 458 DPLDAFMSGLTES---------------DPTQNGRSGA---------KFSKSKQQPEAIF 493
Query: 90 ENQDGLEYSS-EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
++D ++ ++ + E +D + + +++KK+L V+H + Y PFRK FY E ++A +
Sbjct: 494 GDEDDVDMNAIDPEADDFLAITSK--ARKKKDLPLVNHEKMNYEPFRKAFYAEPVDLAGL 551
Query: 149 TPEEVEKYK 157
T EEV +
Sbjct: 552 TEEEVAALR 560
>gi|221483330|gb|EEE21649.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii GT1]
gi|221507816|gb|EEE33403.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 550
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVD 160
+L +VD TI+ +PF K+FYVE P +A M+ EE E+ + +
Sbjct: 74 KLQRVDWKTIDLVPFEKNFYVEHPAVANMSAEEAERIRRAN 114
>gi|237839461|ref|XP_002369028.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211966692|gb|EEB01888.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
Length = 550
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVD 160
+L +VD TI+ +PF K+FYVE P +A M+ EE E+ + +
Sbjct: 74 KLQRVDWKTIDLVPFEKNFYVEHPAVANMSAEEAERIRRAN 114
>gi|68075491|ref|XP_679664.1| ATP-dependent RNA helicase [Plasmodium berghei strain ANKA]
gi|56500462|emb|CAH94307.1| ATP-dependent RNA helicase, putative [Plasmodium berghei]
Length = 1312
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Query: 100 EEEQEDLTSTAANLA-------------SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIA 146
E+EQ +L ++ NL+ K K+ +V+H I+YLP +K+ YV+V EI
Sbjct: 481 EKEQNELDDSSINLSEDSEYNCETNTLKKKINKKFLQVNHDEIDYLPIKKNVYVQVSEIT 540
Query: 147 RMTPEEVEKYK 157
MT ++VE ++
Sbjct: 541 NMTEKDVEMFR 551
>gi|398411885|ref|XP_003857276.1| hypothetical protein MYCGRDRAFT_33937 [Zymoseptoria tritici IPO323]
gi|339477161|gb|EGP92252.1| hypothetical protein MYCGRDRAFT_33937 [Zymoseptoria tritici IPO323]
Length = 1145
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK-EVDN 161
++KE+ DHS + Y RK FY E EIA MT E+VEK + E+DN
Sbjct: 439 KRKEVPNTDHSKVNYEEIRKKFYAESAEIADMTTEDVEKMRAELDN 484
>gi|226290234|gb|EEH45718.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5
[Paracoccidioides brasiliensis Pb18]
Length = 1079
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME 89
DPLDAFM G+ E P +G A K S K + E +
Sbjct: 347 DPLDAFMSGLTES---------------DPTQNGRSGA---------KFSKSKQQPEAIF 382
Query: 90 ENQDGLEYSS-EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
++D ++ ++ + E +D + + +++KK+L V+H + Y PFRK FY E ++A +
Sbjct: 383 GDEDDVDMNAIDPEADDFLAITSK--ARKKKDLPLVNHEKMNYEPFRKAFYAEPVDLAGL 440
Query: 149 TPEEVEKYK 157
T EEV +
Sbjct: 441 TEEEVAALR 449
>gi|392576479|gb|EIW69610.1| hypothetical protein TREMEDRAFT_71685 [Tremella mesenterica DSM
1558]
Length = 1152
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 22/127 (17%)
Query: 31 PLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEE 90
PLDAFM+ +E+RK N AD+ GV + + + K + EE
Sbjct: 367 PLDAFMRENVQEVRKTNV-----------ADAKRLGLGVTALEPESEDDEPEIKSKAQEE 415
Query: 91 NQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTP 150
E+ E L AA+ +KK+L DHS I+Y PFRK FY E+ M
Sbjct: 416 M---------EKAEALLQLAAS--KSRKKDLPPPDHSKIDYEPFRKAFYNPPVEVLEMNE 464
Query: 151 EEVEKYK 157
EE E +
Sbjct: 465 EETEMVR 471
>gi|50548003|ref|XP_501471.1| YALI0C05368p [Yarrowia lipolytica]
gi|74660055|sp|Q6CCZ1.1|PRP5_YARLI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|49647338|emb|CAG81772.1| YALI0C05368p [Yarrowia lipolytica CLIB122]
Length = 974
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 36/149 (24%)
Query: 10 SDEDENDNKDENGKTAE-EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAG 68
S + + ++NG +E ++DPLDA+M + +PTT V ADS
Sbjct: 247 SQSEAKNASEKNGAASEPAEVDPLDAYMSSL----------TLPTTTSVSIADS------ 290
Query: 69 VVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHST 128
+E + E D LE S++ DL+ A ++KE++ VDHS
Sbjct: 291 ---------TPLENLN---VWEQVDTLE-KSQDPTLDLS------ALSKRKEIAIVDHSK 331
Query: 129 IEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
Y FR+ FYVE E+A MT E + +
Sbjct: 332 QVYEDFRRQFYVESSELADMTEAETNELR 360
>gi|150863984|ref|XP_001382645.2| pre-mRNA processing RNA-helicase [Scheffersomyces stipitis CBS
6054]
gi|158514823|sp|A3LQ55.2|PRP5_PICST RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|149385240|gb|ABN64616.2| pre-mRNA processing RNA-helicase [Scheffersomyces stipitis CBS
6054]
Length = 875
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 100 EEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+++QE L+S L + +K+L +DHST+ Y FRK+FY E EI T E+VE +
Sbjct: 199 KKQQELLSSKFQKL--QNEKQLETIDHSTMNYSDFRKNFYQEPSEIQNWTAEQVESIR 254
>gi|336272585|ref|XP_003351049.1| hypothetical protein SMAC_04353 [Sordaria macrospora k-hell]
gi|380090816|emb|CCC04986.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1190
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 18 KDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVK 77
+D ++++DPLDAFM G+ + + V T D G+ P
Sbjct: 422 QDSTAMDVDDEVDPLDAFMAGLEQT---ASSEEVQTKIDTLAEKKGNTPP---------- 468
Query: 78 KSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKD 137
E + D Y E + D TS A + K+KK++ +D+S ++ P RK+
Sbjct: 469 --------EAYFSDDD---YGYEADGTDPTSILAMASKKKKKDIPTIDYSKLDLNPIRKN 517
Query: 138 FYVEVPEIARMT 149
F+VE E+++M+
Sbjct: 518 FWVEPYELSQMS 529
>gi|170091070|ref|XP_001876757.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648250|gb|EDR12493.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 661
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 124 VDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
VDH + Y PFRK+FY+ P+IA MT EE E
Sbjct: 29 VDHGRVRYEPFRKEFYIPPPDIAAMTEEEAE 59
>gi|154332507|ref|XP_001562070.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059518|emb|CAM37096.1| putative ATP-dependent DEAD/H RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 868
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 115 SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK-YKEVDN 161
+K+ ++L+ VDHS + Y P R DFYV P++ +T +E+ KE+D
Sbjct: 171 AKKLRQLAYVDHSQMHYAPIRTDFYVVPPDMTNLTADEMRALLKELDG 218
>gi|358417495|ref|XP_003583658.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
[Bos taurus]
gi|359077050|ref|XP_003587506.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
[Bos taurus]
Length = 947
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|444726996|gb|ELW67506.1| ATP-dependent RNA helicase DDX42 [Tupaia chinensis]
Length = 939
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 67 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 116
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 117 HEEITNLTPQQL 128
>gi|148702333|gb|EDL34280.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_b [Mus
musculus]
Length = 1012
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 254 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 303
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 304 HEEITNLTPQQL 315
>gi|426238255|ref|XP_004013070.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Ovis aries]
Length = 948
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|157838001|ref|NP_082350.3| ATP-dependent RNA helicase DDX42 [Mus musculus]
gi|123796460|sp|Q810A7.3|DDX42_MOUSE RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|74146847|dbj|BAE41388.1| unnamed protein product [Mus musculus]
Length = 929
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|74152734|dbj|BAE42635.1| unnamed protein product [Mus musculus]
Length = 929
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|417405318|gb|JAA49373.1| Putative rna helicase [Desmodus rotundus]
Length = 933
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|402900734|ref|XP_003913323.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Papio
anubis]
gi|402900736|ref|XP_003913324.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Papio
anubis]
Length = 937
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GMVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|344285247|ref|XP_003414374.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Loxodonta africana]
Length = 934
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|393215693|gb|EJD01184.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 868
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 124 VDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
VDHS I Y PFRK+FY PEIA MT EE + +
Sbjct: 150 VDHSRIVYEPFRKEFYRAPPEIAEMTDEEADLLR 183
>gi|148702332|gb|EDL34279.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_a [Mus
musculus]
Length = 927
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 169 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 218
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 219 HEEITNLTPQQL 230
>gi|291406357|ref|XP_002719521.1| PREDICTED: DEAD box polypeptide 42 protein [Oryctolagus cuniculus]
Length = 935
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|387763217|ref|NP_001248484.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|355568823|gb|EHH25104.1| hypothetical protein EGK_08866 [Macaca mulatta]
gi|355754284|gb|EHH58249.1| hypothetical protein EGM_08053 [Macaca fascicularis]
gi|380809324|gb|AFE76537.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|383415577|gb|AFH31002.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|384945118|gb|AFI36164.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
Length = 937
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GMVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|395826079|ref|XP_003786247.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Otolemur garnettii]
Length = 936
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|345804940|ref|XP_537598.3| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
isoform 1 [Canis lupus familiaris]
Length = 934
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|157817897|ref|NP_001100529.1| ATP-dependent RNA helicase DDX42 [Rattus norvegicus]
gi|149054552|gb|EDM06369.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (predicted) [Rattus
norvegicus]
Length = 929
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|281351661|gb|EFB27245.1| hypothetical protein PANDA_013938 [Ailuropoda melanoleuca]
Length = 940
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 176 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 225
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 226 HEEITNLTPQQL 237
>gi|410981498|ref|XP_003997105.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Felis catus]
Length = 934
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|133777033|gb|AAH43036.4| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Mus musculus]
Length = 810
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 52 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 101
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 102 HEEITNLTPQQL 113
>gi|194216767|ref|XP_001501051.2| PREDICTED: ATP-dependent RNA helicase DDX42 [Equus caballus]
Length = 935
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|296201782|ref|XP_002748184.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Callithrix jacchus]
Length = 934
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|66819701|ref|XP_643509.1| hypothetical protein DDB_G0275443 [Dictyostelium discoideum AX4]
gi|74897315|sp|Q553B1.1|DDX46_DICDI RecName: Full=ATP-dependent RNA helicase ddx46; AltName:
Full=ATP-dependent RNA helicase helB1; AltName:
Full=DEAD box protein 46
gi|60471516|gb|EAL69472.1| hypothetical protein DDB_G0275443 [Dictyostelium discoideum AX4]
Length = 1151
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
E+ DH++I+Y F+K+FY+EVP +A MT EV ++
Sbjct: 455 EMLHTDHTSIKYAEFQKNFYIEVPVLANMTETEVLDFR 492
>gi|301778305|ref|XP_002924562.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Ailuropoda
melanoleuca]
Length = 935
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|26340024|dbj|BAC33675.1| unnamed protein product [Mus musculus]
Length = 810
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 52 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 101
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 102 HEEITNLTPQQL 113
>gi|351704433|gb|EHB07352.1| ATP-dependent RNA helicase DDX42 [Heterocephalus glaber]
Length = 935
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 172 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 221
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 222 HEEITNLTPQQL 233
>gi|340053803|emb|CCC48097.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma vivax Y486]
Length = 926
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 115 SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK-YKEVDN 161
+K+ ++L VDHSTI Y+P +K+FY+ P++ + +E++K KE+D
Sbjct: 225 AKRLRKLQYVDHSTINYVPIQKEFYISPPDVKDLDADEMKKLLKELDG 272
>gi|169607499|ref|XP_001797169.1| hypothetical protein SNOG_06807 [Phaeosphaeria nodorum SN15]
gi|182676401|sp|Q0UN57.2|PRP5_PHANO RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|160701425|gb|EAT85458.2| hypothetical protein SNOG_06807 [Phaeosphaeria nodorum SN15]
Length = 1184
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 61/135 (45%), Gaps = 36/135 (26%)
Query: 19 DENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK 78
D+N E+D+DPLDAFM AD+ S+ A
Sbjct: 424 DDNAGAEEDDVDPLDAFM------------------ADLSVPQQPSRAA----------- 454
Query: 79 SVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
+GE M N D + E EDL + A K+KKE+ ++H +EY PFRKDF
Sbjct: 455 ----PQGETMF-NDDLEPEQTAVEGEDLLALRAA--KKKKKEVPTINHEKVEYEPFRKDF 507
Query: 139 YVEVPEIARMTPEEV 153
Y E EI +M+ E+V
Sbjct: 508 YTEPAEITQMSAEDV 522
>gi|431908881|gb|ELK12473.1| ATP-dependent RNA helicase DDX42 [Pteropus alecto]
Length = 927
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 162 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 211
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 212 HEEITSLTPQQL 223
>gi|354479437|ref|XP_003501916.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Cricetulus griseus]
gi|344243071|gb|EGV99174.1| ATP-dependent RNA helicase DDX42 [Cricetulus griseus]
Length = 928
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 170 GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNE 219
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 220 HEEITSLTPQQL 231
>gi|403303756|ref|XP_003942489.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403303758|ref|XP_003942490.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 933
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|206725493|ref|NP_001126368.1| ATP-dependent RNA helicase DDX42 [Pongo abelii]
Length = 942
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|75061727|sp|Q5R7D1.1|DDX42_PONAB RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|55731230|emb|CAH92329.1| hypothetical protein [Pongo abelii]
Length = 942
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|343475012|emb|CCD13485.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 930
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK-YKEVDN 161
K+ ++L VDHSTIEY P +K+FYV P++ + EE++ +E+D
Sbjct: 232 KRLRKLKYVDHSTIEYSPIQKEFYVTPPDVKGLRAEELKTLLRELDG 278
>gi|426347141|ref|XP_004041217.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Gorilla
gorilla gorilla]
gi|426347143|ref|XP_004041218.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Gorilla
gorilla gorilla]
Length = 938
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|342181179|emb|CCC90657.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma congolense
IL3000]
Length = 930
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK-YKEVDN 161
K+ ++L VDHSTIEY P +K+FYV P++ + EE++ +E+D
Sbjct: 232 KRLRKLKYVDHSTIEYSPIQKEFYVTPPDVKGLRAEELKTLLRELDG 278
>gi|114669830|ref|XP_001147818.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 7 [Pan
troglodytes]
gi|114669832|ref|XP_001147880.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 8 [Pan
troglodytes]
gi|397480220|ref|XP_003811385.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Pan
paniscus]
gi|397480222|ref|XP_003811386.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Pan
paniscus]
gi|410223570|gb|JAA09004.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410223572|gb|JAA09005.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410254498|gb|JAA15216.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410294570|gb|JAA25885.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410294572|gb|JAA25886.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410338913|gb|JAA38403.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410338915|gb|JAA38404.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
Length = 938
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|51258614|gb|AAH78667.1| DDX42 protein, partial [Homo sapiens]
Length = 919
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 152 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 201
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 202 HEEITNLTPQQL 213
>gi|332243110|ref|XP_003270725.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Nomascus leucogenys]
Length = 938
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|45446743|ref|NP_031398.2| ATP-dependent RNA helicase DDX42 [Homo sapiens]
gi|45446747|ref|NP_987095.1| ATP-dependent RNA helicase DDX42 [Homo sapiens]
gi|74750541|sp|Q86XP3.1|DDX42_HUMAN RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42; AltName: Full=RNA helicase-like protein;
Short=RHELP; AltName: Full=RNA helicase-related protein;
Short=RNAHP; AltName: Full=SF3b DEAD box protein;
AltName: Full=Splicing factor 3B-associated 125 kDa
protein; Short=SF3b125
gi|29420431|dbj|BAC66466.1| RNA helicase-related protein [Homo sapiens]
gi|62205357|gb|AAH93081.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Homo sapiens]
gi|119614683|gb|EAW94277.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_b [Homo
sapiens]
gi|168277556|dbj|BAG10756.1| ATP-dependent RNA helicase DDX42 [synthetic construct]
Length = 938
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 171 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 220
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 221 HEEITNLTPQQL 232
>gi|119614684|gb|EAW94278.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_c [Homo
sapiens]
Length = 936
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 169 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 218
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 219 HEEITNLTPQQL 230
>gi|15930131|gb|AAH15505.1| DDX42 protein [Homo sapiens]
gi|23336904|tpg|DAA00077.1| TPA_exp: SF3b125 DEAD-box protein [Homo sapiens]
gi|158259277|dbj|BAF85597.1| unnamed protein product [Homo sapiens]
Length = 819
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 52 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 101
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 102 HEEITNLTPQQL 113
>gi|303274675|ref|XP_003056653.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461005|gb|EEH58298.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1177
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 50/180 (27%)
Query: 26 EEDIDPLDAFM---------------------------------------QGVHEEMRKV 46
+ED+DPLDAFM G + + +
Sbjct: 288 DEDVDPLDAFMAANEKKATALAAAALAEPPRPTPIPRPTPIVGGLLVKNSSGFLKGL-TI 346
Query: 47 NKPAVPTTA---------DVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEY 97
+P + A K G K AGVV S + ++ ++
Sbjct: 347 KRPVGSSAAVSKLAKKAPGAKSGRGGGKSAGVVARRFFDADSDASSSSSGDSDSDADVKA 406
Query: 98 SSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
SS+++ E + SK K L DH++I+Y PFRK+FY+E EIA++T E+ ++ +
Sbjct: 407 SSDDDDEAWARKQKSKLSKADK-LGLADHASIDYAPFRKNFYIESYEIAKLTKEQTKELR 465
>gi|119614682|gb|EAW94276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_a [Homo
sapiens]
Length = 828
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 61 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 110
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 111 HEEITNLTPQQL 122
>gi|392593094|gb|EIW82420.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 715
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 124 VDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
VDHS I Y PFRK+FY+ P+IA M+ EE + +
Sbjct: 74 VDHSRINYEPFRKEFYIPPPDIAAMSDEEADLLR 107
>gi|348677782|gb|EGZ17599.1| hypothetical protein PHYSODRAFT_300617 [Phytophthora sojae]
Length = 841
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 94 GLEYSSEEEQEDLTSTAANL---------ASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GL +++ E++ +TA L A K + L+ +DHST+ Y PFR++FY E
Sbjct: 50 GLSSGNDDSDEEVYATAKQLDDADAPDEMAKKVMEVLAPIDHSTVRYEPFRRNFYSLHSE 109
Query: 145 IARMTPEEVEKYK 157
+ ++ +EV K +
Sbjct: 110 TSSLSNQEVAKLR 122
>gi|443713646|gb|ELU06388.1| hypothetical protein CAPTEDRAFT_205408, partial [Capitella teleta]
Length = 235
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 24 TAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVV-KKSVEK 82
TAEE +DPLDA+MQ V E+ K V ++ SK V I+T V KK+ K
Sbjct: 164 TAEE-VDPLDAYMQEVTTEV-TTKKCVVENSSSNGNNGDSSKKGKVTIITAVAKKKNPIK 221
Query: 83 AKGELMEENQDGLE 96
KGELM +N D LE
Sbjct: 222 QKGELMIDNADALE 235
>gi|313231677|emb|CBY08790.1| unnamed protein product [Oikopleura dioica]
Length = 863
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 8 DDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPA 67
D + E N+ + G E++IDPLDAFM V+ +++K V SKP
Sbjct: 68 DPFNPTEEQNQAQAGGDDEDEIDPLDAFM-AVNNAKAEIDKKNV----------GKSKPK 116
Query: 68 GVVIVTGVVKKSVEKAKGELMEENQD---GLEYSSEEEQEDLTSTAANLASKQKKE---L 121
+ + KK E+ + ++ N + ++ EE E++T A+K KKE L
Sbjct: 117 QKALRQDIEKKDSEEQFYDYIKANPNAGKAFTHTEEEAGEEITYDEYGNATKVKKEIDPL 176
Query: 122 SKVDHSTIEYLPFRKDFY 139
+ HS IEY F+K+FY
Sbjct: 177 PAICHSEIEYPSFQKNFY 194
>gi|405969088|gb|EKC34097.1| ATP-dependent RNA helicase DDX42 [Crassostrea gigas]
Length = 788
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
L VDHS I+Y PF K+FYVE +IA++ P EV++ ++
Sbjct: 244 LPPVDHSDIDYGPFVKNFYVEHEDIAKLQPNEVDELRK 281
>gi|328876634|gb|EGG24997.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 806
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+L+K+D+STIE F K+FY E E++ M+ +EV +Y+E
Sbjct: 345 KLNKIDYSTIELTKFEKNFYKEDSEVSAMSQDEVRQYRE 383
>gi|82595021|ref|XP_725673.1| RNA helicase [Plasmodium yoelii yoelii 17XNL]
gi|23480764|gb|EAA17238.1| similar to RNA helicases, putative [Plasmodium yoelii yoelii]
Length = 1381
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 113 LASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
L K K+ +V+H I+YLP +K+ YV+V EI M+ ++VE ++
Sbjct: 555 LKKKINKKFLQVNHDEIDYLPIKKNVYVQVSEITNMSEKDVEMFR 599
>gi|322695045|gb|EFY86860.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Metarhizium
acridum CQMa 102]
Length = 1161
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 96 EYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
EY+ + EQ+ + A ++KK++ VD+S I+ +P RK+F+VE E++ +T EE+
Sbjct: 455 EYNFDSEQKGDSDILAIANKRKKKDIPTVDYSKIDLVPVRKNFWVEPAELSALTEEEL 512
>gi|389631667|ref|XP_003713486.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Magnaporthe
oryzae 70-15]
gi|152032666|sp|A4RN46.1|PRP5_MAGO7 RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|351645819|gb|EHA53679.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Magnaporthe
oryzae 70-15]
Length = 1012
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 23/144 (15%)
Query: 14 ENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVT 73
+ D+ D + K ++++DPLDAFM + E PA SKP + T
Sbjct: 240 QTDSMDVDTKEDDDEVDPLDAFMADLTEP-------------SFGPA---SKP----VKT 279
Query: 74 GVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLP 133
K + + ++++ G +S +E D + A A ++KKE+ +D+S ++ +P
Sbjct: 280 LSSAKVLPTPEAYFSDDDEFG---ASTKEGVDAKAIMAMAAKRKKKEIPTIDYSKLDIVP 336
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
RK+F+VE E++ MT EV + +
Sbjct: 337 VRKNFWVEPYELSEMTEAEVAELR 360
>gi|3435312|gb|AAC32396.1| RNA helicase-related protein [Homo sapiens]
Length = 709
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS I+Y PF K+FY E
Sbjct: 52 GVVQEEEEDNLEYDSD----------GNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNE 101
Query: 142 VPEIARMTPEEV 153
EI +TP+++
Sbjct: 102 HEEITNLTPQQL 113
>gi|241172335|ref|XP_002410726.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215494955|gb|EEC04596.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 658
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 111 ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
A + SK L +DHSTI Y F K+FY E EIA ++PEEV+ +
Sbjct: 119 APVKSKYIDPLPPIDHSTISYKEFTKNFYQEHEEIAALSPEEVDALR 165
>gi|298712625|emb|CBJ48650.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 694
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
K+ + L VDHS IEY PFRK FY P++AR+ EV++ +
Sbjct: 121 KKIEALPPVDHSQIEYEPFRKVFYELHPDMARLNAWEVKQLR 162
>gi|327275873|ref|XP_003222696.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Anolis
carolinensis]
Length = 924
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
G + EE +D LEY S+ N + KK L +DHS IEY PF K+F+ E
Sbjct: 171 GVVPEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFHEE 220
Query: 142 VPEIARMTPEEV 153
EI +TP++V
Sbjct: 221 HEEITSLTPQQV 232
>gi|440463671|gb|ELQ33225.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Magnaporthe
oryzae Y34]
gi|440481910|gb|ELQ62446.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Magnaporthe
oryzae P131]
Length = 1230
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 23/144 (15%)
Query: 14 ENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVT 73
+ D+ D + K ++++DPLDAFM AD+ G PA + T
Sbjct: 458 QTDSMDVDTKEDDDEVDPLDAFM------------------ADLTEPSFG--PASKPVKT 497
Query: 74 GVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLP 133
K + + ++++ G +S +E D + A A ++KKE+ +D+S ++ +P
Sbjct: 498 LSSAKVLPTPEAYFSDDDEFG---ASTKEGVDAKAIMAMAAKRKKKEIPTIDYSKLDIVP 554
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
RK+F+VE E++ MT EV + +
Sbjct: 555 VRKNFWVEPYELSEMTEAEVAELR 578
>gi|261328385|emb|CBH11362.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 948
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV-EKYKEVDN 161
K+ ++L VDHSTIEY P +K+FYV P++ + E+ E KE+D
Sbjct: 251 KRLRKLHYVDHSTIEYPPIQKEFYVSPPDVRGLDAGELKELLKELDG 297
>gi|72389470|ref|XP_845030.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62176713|gb|AAX70813.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei]
gi|70801564|gb|AAZ11471.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 948
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV-EKYKEVDN 161
K+ ++L VDHSTIEY P +K+FYV P++ + E+ E KE+D
Sbjct: 251 KRLRKLHYVDHSTIEYPPIQKEFYVSPPDVRGLDAGELKELLKELDG 297
>gi|353238668|emb|CCA70607.1| related to RNA helicase [Piriformospora indica DSM 11827]
Length = 1042
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 40/165 (24%)
Query: 5 NLEDDSDEDENDNKDENGKTAEEDID------PLDAFMQGVHEEMRKVNKPAVPTTADVK 58
NLE D+DE K T + D+D PLDAFM GV +E+ V+ AD K
Sbjct: 226 NLEAADDDDEVTEK----PTVQMDVDEEEEEDPLDAFMSGVIQEVHHVDG------ADGK 275
Query: 59 PADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTS------TAAN 112
K+S A+ + E+N+ +S ++ D T+ A
Sbjct: 276 ------------------KQSRLGARVDDGEDNEPAAAQTSVVDEIDATNLNPEEIMALA 317
Query: 113 LASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+KK+++ VDHS + Y PFRK FY P+IA MT ++ E +
Sbjct: 318 AKKIKKKDVAVVDHSKVTYEPFRKAFYHPTPDIAEMTEQDAENLR 362
>gi|118401955|ref|XP_001033297.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89287645|gb|EAR85634.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 1357
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
QKKEL +D++ E F+K+FY+E EI++MT +EV+ Y+E
Sbjct: 637 QKKELKPIDYNEDELEHFQKNFYIESKEISQMTEDEVKIYRE 678
>gi|350296822|gb|EGZ77799.1| Pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Neurospora
tetrasperma FGSC 2509]
Length = 1195
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 29/127 (22%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
++++DPLDAFM G+ + TA + +S SK EK KG
Sbjct: 436 DDEVDPLDAFMAGLEQ------------TASGE--ESHSK----------ADTLTEKKKG 471
Query: 86 ELMEE---NQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEV 142
+ E + D +Y E + D TS A + K+KK++ +D+S ++ P RK+F+VE
Sbjct: 472 NIPPEAYFSDD--DYGYEADGTDPTSILAMASKKKKKDIPTIDYSKLDLNPIRKNFWVEP 529
Query: 143 PEIARMT 149
E++ M+
Sbjct: 530 YELSHMS 536
>gi|163915660|gb|AAI57684.1| LOC100135374 protein [Xenopus (Silurana) tropicalis]
Length = 898
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
G + EE +D LEY S+ + A + L +DH+ IEY PF K+FY E E
Sbjct: 123 GLVPEEEEDNLEYDSD------GNPIAPTTKRIIDPLPPIDHTEIEYTPFEKNFYEEHEE 176
Query: 145 IARMTPEEVEKYKE 158
I TP+++ + +
Sbjct: 177 ITSQTPQQITELRH 190
>gi|294943505|ref|XP_002783894.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239896718|gb|EER15690.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 135
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
KKEL VDHS IEY P +K+ Y +V EI+ M EV + ++
Sbjct: 13 KKELPPVDHSKIEYYPIKKNLYKQVREISNMPEHEVAQLRQ 53
>gi|389747348|gb|EIM88527.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 688
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 124 VDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
VDHS + Y PFRK+FY+ P+IA MT EE + +
Sbjct: 46 VDHSRMSYEPFRKEFYMPPPDIAAMTDEEADLLR 79
>gi|336464722|gb|EGO52962.1| hypothetical protein NEUTE1DRAFT_150386 [Neurospora tetrasperma
FGSC 2508]
Length = 1193
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 96 EYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK 155
+Y E + D TS A + K+KK++ +D+S ++ P RK+F+VE E++ M+ E+ +
Sbjct: 481 DYGYEADGTDPTSILAMASKKKKKDIPTIDYSKLDLNPIRKNFWVEPYELSHMSEGELAE 540
Query: 156 YK 157
+
Sbjct: 541 LR 542
>gi|301612200|ref|XP_002935570.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Xenopus (Silurana)
tropicalis]
Length = 943
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
G + EE +D LEY S+ + A + L +DH+ IEY PF K+FY E E
Sbjct: 168 GLVPEEEEDNLEYDSD------GNPIAPTTKRIIDPLPPIDHTEIEYTPFEKNFYEEHEE 221
Query: 145 IARMTPEEVEKYKE 158
I TP+++ + +
Sbjct: 222 ITSQTPQQITELRH 235
>gi|115491279|ref|XP_001210267.1| hypothetical protein ATEG_00181 [Aspergillus terreus NIH2624]
gi|121743211|sp|Q0D1K3.1|PRP5_ASPTN RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|114197127|gb|EAU38827.1| hypothetical protein ATEG_00181 [Aspergillus terreus NIH2624]
Length = 1181
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 24/132 (18%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
EE+IDPLDAFM + E P TT G+K K ++ +
Sbjct: 424 EEEIDPLDAFMSELVE-----TAPPKKTT--------GAK---------FSKAKEQQPEA 461
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
+EN + E + +D + A +K+KK++ KVDH+ +EY PFRK FY E ++
Sbjct: 462 IFGDENDPDITAVGEGDADDFLAIANK--AKKKKDIPKVDHAKMEYEPFRKKFYTEPSDL 519
Query: 146 ARMTPEEVEKYK 157
A+M+ E+ +
Sbjct: 520 AQMSEGELASLR 531
>gi|238881065|gb|EEQ44703.1| hypothetical protein CAWG_02982 [Candida albicans WO-1]
Length = 514
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE-VDN 161
+DL ST + KEL +DHS Y FRK FY E E++ ++ E+VE ++ +DN
Sbjct: 222 QDLISTKLTKLQNKGKELQSIDHSQENYQEFRKVFYREAYELSALSDEQVELIRQDLDN 280
>gi|145350640|ref|XP_001419709.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579941|gb|ABO98002.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 723
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 114 ASKQKKELSK------VDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
A KQ +LSK V+H I+Y P +K+FY+E EIA MT EV++ +
Sbjct: 50 AKKQTAKLSKTERLGTVNHDEIDYEPVKKNFYIEAKEIASMTKAEVKQLR 99
>gi|443706339|gb|ELU02447.1| hypothetical protein CAPTEDRAFT_155002 [Capitella teleta]
Length = 806
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 18/130 (13%)
Query: 31 PLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVE-----KAKG 85
PL+AFM G+ + ++ + V T A K D G V++ +E ++
Sbjct: 75 PLEAFMAGIEKTVKTQDTKKVKTEAKSKTTDRG------------VREDIEGEDELESYM 122
Query: 86 ELMEENQDGLEYSSEEEQE-DLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
MEEN + EE E D K L +DH IEY F K+FY PE
Sbjct: 123 RYMEENPNAGILDDEENVEYDEDGNPITADKKVIDPLPDIDHHEIEYEKFTKNFYDPHPE 182
Query: 145 IARMTPEEVE 154
I+ +TPE+V
Sbjct: 183 ISSLTPEKVH 192
>gi|322708721|gb|EFZ00298.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Metarhizium
anisopliae ARSEF 23]
Length = 1245
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 96 EYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
EY+ + EQ+ A ++KK++ VD+S I+ +P RK+F+VE E++ +T EE+
Sbjct: 539 EYNFDSEQKGDPDILAIANKRKKKDIPTVDYSKIDLVPVRKNFWVEPAELSALTEEEL 596
>gi|301118572|ref|XP_002907014.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262108363|gb|EEY66415.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 2091
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
++KKE+ VDHS + Y+ F+K FYV EI ++ EEVE ++V
Sbjct: 1432 QKKKEIKPVDHSKMNYISFQKKFYVVPKEIKDLSDEEVEAQRKV 1475
>gi|384498823|gb|EIE89314.1| hypothetical protein RO3G_14025 [Rhizopus delemar RA 99-880]
Length = 674
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 93 DGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEE 152
D L+ + ED +S+A K+ + LS+VDH TIEYLP K+FY E +IA + E
Sbjct: 170 DRLDKQMYDSDEDNSSSAP--VKKEIEPLSRVDHGTIEYLPIEKNFYEEHQDIAALDDER 227
Query: 153 VE 154
V+
Sbjct: 228 VK 229
>gi|70952047|ref|XP_745218.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56525472|emb|CAH79770.1| hypothetical protein PC000484.03.0 [Plasmodium chabaudi chabaudi]
Length = 435
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 123 KVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+V+H I+YLP +K+ YV+V EI MT ++VE +++
Sbjct: 303 QVNHDEIDYLPIKKNVYVQVSEITNMTDKDVEMFRK 338
>gi|68472255|ref|XP_719923.1| hypothetical protein CaO19.6831 [Candida albicans SC5314]
gi|68472490|ref|XP_719806.1| hypothetical protein CaO19.14123 [Candida albicans SC5314]
gi|74656514|sp|Q5ADL0.1|PRP5_CANAL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|46441642|gb|EAL00938.1| hypothetical protein CaO19.14123 [Candida albicans SC5314]
gi|46441768|gb|EAL01063.1| hypothetical protein CaO19.6831 [Candida albicans SC5314]
Length = 884
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE-VDN 161
+DL ST + KEL +DHS Y FRK FY E E++ ++ E+VE ++ +DN
Sbjct: 222 QDLISTKLTKLQNKGKELQSIDHSQENYQEFRKVFYREAYELSALSDEQVELIRQDLDN 280
>gi|320590111|gb|EFX02556.1| dead deah box RNA helicase [Grosmannia clavigera kw1407]
Length = 1178
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 38/139 (27%)
Query: 24 TAEEDIDPLDAFMQGVHEE-----MRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK 78
+ ++++DPLDAFM + RKV KPA A D
Sbjct: 415 STDDNVDPLDAFMADLSHAPDPSTRRKVKKPAAEPEAYFSDDD----------------- 457
Query: 79 SVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
+ + Q+G+ D S A ++KK++ +D+S +E P RK+F
Sbjct: 458 -------DYFSKAQNGI---------DTKSILAMATKRKKKDIPTIDYSKMELTPIRKNF 501
Query: 139 YVEVPEIARMTPEEVEKYK 157
+VE E++ +T EV + +
Sbjct: 502 WVEPHELSELTEAEVAELR 520
>gi|397646742|gb|EJK77411.1| hypothetical protein THAOC_00764 [Thalassiosira oceanica]
Length = 418
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+K+EL VDH ++EYL RK+ Y +A + PEEV +
Sbjct: 209 KKRELRSVDHGSVEYLAVRKNLYTVPRSLAGLGPEEVAARR 249
>gi|428163290|gb|EKX32369.1| hypothetical protein GUITHDRAFT_121478 [Guillardia theta CCMP2712]
Length = 348
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
Query: 24 TAEEDIDPLDAFMQGVHEEMRKVNKPAV---------PTTADVKPADSGSKPAGVVIVTG 74
A+ D+DPLDAFM E+M+K + V P TA + + A V+
Sbjct: 7 AADLDVDPLDAFMATNAEKMKKPTQSKVDRFQDEEDDPETAYMLALEKKKAEAAKGSVS- 65
Query: 75 VVKKSV--------EKAKGELMEENQDG----LEYSSEEEQEDLTSTAANLASKQKKEL- 121
VV S+ E+ +GE E + Y++ + T T +EL
Sbjct: 66 VVSASIGNEDADSDEEGRGESAEGRKLTRLLLAVYATARAISNATRTVIPSLKTAMEELD 125
Query: 122 SKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
VDHS ++Y PF K FY E PEI M+ EV + ++
Sbjct: 126 GSVDHSKMDYKPFEKCFYEEDPEIFAMSEAEVIQLRK 162
>gi|348665957|gb|EGZ05785.1| hypothetical protein PHYSODRAFT_533185 [Phytophthora sojae]
Length = 2125
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
++KKE+ VDHS + YL F+K FYV EI ++ EEVE
Sbjct: 1466 QKKKEIKPVDHSKMNYLAFQKKFYVVPKEIKDLSEEEVE 1504
>gi|344231977|gb|EGV63856.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 809
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 103 QEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Q D+ S+ +++K L VDHS+I+Y PFR+ FY E ++ +E+ K ++
Sbjct: 164 QNDILSSKLKKLQEREKALETVDHSSIDYKPFRRVFYKPPKEFESLSSDEITKIRQ 219
>gi|70938627|ref|XP_739964.1| ATP-dependent RNA helicase [Plasmodium chabaudi chabaudi]
gi|56517342|emb|CAH87733.1| ATP-dependent RNA helicase, putative [Plasmodium chabaudi chabaudi]
Length = 506
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 123 KVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+V+H I+YLP +K+ YV+V EI MT ++VE +++
Sbjct: 20 QVNHDEIDYLPIKKNVYVQVSEITNMTDKDVEMFRK 55
>gi|85118552|ref|XP_965469.1| hypothetical protein NCU02696 [Neurospora crassa OR74A]
gi|74662807|sp|Q7SH33.1|PRP5_NEUCR RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp-5
gi|28927278|gb|EAA36233.1| hypothetical protein NCU02696 [Neurospora crassa OR74A]
gi|38567223|emb|CAE76515.1| related to RNA helicase [Neurospora crassa]
Length = 1194
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 96 EYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMT 149
+Y E + D TS A + K+KK++ +D+S ++ P RK+F+VE E++ M+
Sbjct: 482 DYGYEADGTDPTSILAMASKKKKKDIPTIDYSKLDLNPIRKNFWVEPYELSHMS 535
>gi|432867546|ref|XP_004071236.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oryzias latipes]
Length = 903
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 22 GKTAEEDIDPLDAFMQGVH----EEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVK 77
G ++ + DPLDAFM V ++M+K+ + A+ I + +
Sbjct: 103 GGGSDSEDDPLDAFMAEVESQAAQDMQKLEEKEKEKKANKG------------IRDDIEE 150
Query: 78 KSVEKAKGELMEEN-QDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLP 133
+ ++A M EN GL EEE D S + S KK L +DHS I+Y P
Sbjct: 151 EDEQEAYFRYMAENPTAGLTQEEEEENIDYDSDGNPIPSTTKKIILPLPPIDHSEIDYPP 210
Query: 134 FRKDFYVEVPEIARMTPEEVEKYKE 158
F K+FY E E++ +T +V + ++
Sbjct: 211 FEKNFYNEHEELSSLTGSQVVELRQ 235
>gi|325179839|emb|CCA14242.1| Os08g0159900 putative [Albugo laibachii Nc14]
Length = 1173
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 115 SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+++KK++ VDHS IEY+PF+K YV EI + +EV++ +
Sbjct: 512 AQKKKDIKPVDHSKIEYVPFQKKLYVTPREIKDLADDEVQELR 554
>gi|408391854|gb|EKJ71221.1| hypothetical protein FPSE_08584 [Fusarium pseudograminearum CS3096]
Length = 1192
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 42/135 (31%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E+D+DPLDAFM AD+K D V++ + +
Sbjct: 441 EDDVDPLDAFM------------------ADLKQTD--------------VRRPTKTSTT 468
Query: 86 ELMEENQDGLEYSSEEEQE-------DLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
+ ++E + Y S++E + D ++ A A ++KK++ +D+S IE P RK+F
Sbjct: 469 QKIQEPE---AYFSDDEYDFNKKDEGDASALLAITAKRKKKDIPTIDYSKIEIEPIRKNF 525
Query: 139 YVEVPEIARMTPEEV 153
+ E E++ +T EV
Sbjct: 526 WHEPAELSLLTEAEV 540
>gi|147904944|ref|NP_001086205.1| MGC84147 protein [Xenopus laevis]
gi|49522819|gb|AAH74323.1| MGC84147 protein [Xenopus laevis]
Length = 450
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
G + EE +D LEY S+ + A + L +DH+ IEY PF K+FY E E
Sbjct: 168 GLVPEEEEDNLEYDSD------GNPIAPTTKRIIDPLPPIDHTEIEYPPFEKNFYEEHEE 221
Query: 145 IARMTPEEV 153
I TP+++
Sbjct: 222 ITSQTPQQI 230
>gi|156391127|ref|XP_001635620.1| predicted protein [Nematostella vectensis]
gi|156222716|gb|EDO43557.1| predicted protein [Nematostella vectensis]
Length = 518
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 115 SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
SK + L +VDHS I+Y PF K+FY E PEI + + +E++ ++
Sbjct: 47 SKIIEPLPRVDHSEIDYKPFNKNFYEEHPEITKQSKQEIDDLRK 90
>gi|354545573|emb|CCE42301.1| hypothetical protein CPAR2_808500 [Candida parapsilosis]
Length = 863
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 98 SSEEEQEDLTSTA-ANLA--SKQKKELSKVDHSTIEYLPFRKDFYVEVP-EIARMTPEEV 153
S EEE DL S LA + KEL +DHS I YL F+KDFY +VP E++ M+ +E+
Sbjct: 196 SIEEEDTDLQSLIDLKLAKLNNTTKELKDIDHSQISYLSFKKDFY-KVPFELSSMSEDEI 254
>gi|346322147|gb|EGX91746.1| DEAD/DEAH box RNA helicase [Cordyceps militaris CM01]
Length = 1216
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
AE+D+DPLDAFM + ++ K P +T VKK E
Sbjct: 455 AEDDVDPLDAFMDDLQQKEVKRRPPKKTST---------------------VKKLPEPE- 492
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
+N G Y ++ D ++ A ++KK++ VD+S I+ P RK+F+ E E
Sbjct: 493 -AYFSDNDYG--YEVDKNAADASAVLAMTNKRKKKDIPTVDYSKIDIQPIRKNFWAEPVE 549
Query: 145 IARMTPEEV 153
++ + EV
Sbjct: 550 LSELNEAEV 558
>gi|383857449|ref|XP_003704217.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Megachile
rotundata]
Length = 774
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME 89
DPLDAFM G+ E++K N A D K S A + + E++ ME
Sbjct: 113 DPLDAFMAGIDAEVKKNNYEAQLAEDDRKEDKSKGFRADIDC------EDDEESYYRYME 166
Query: 90 EN-QDGLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFYVEVPEI 145
EN GL+ +++ + +A +KKE L +DHS I+Y F K+FY EI
Sbjct: 167 ENPTAGLQQEESDQEIEYDEDGNPIAPPKKKEIDPLPPIDHSEIQYESFEKNFYNVHDEI 226
Query: 146 ARMTPEEVE 154
A ++ ++++
Sbjct: 227 ASLSKQQID 235
>gi|307204462|gb|EFN83169.1| ATP-dependent RNA helicase DDX42 [Harpegnathos saltator]
Length = 770
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 30 DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELME 89
DPLDAFM G+ E+++ N A DV + SK + + E++ ME
Sbjct: 113 DPLDAFMAGIDAEVKRNNSLA---QCDVDRKEDKSKG----FRADIDGEDDEESYYRYME 165
Query: 90 EN-QDGLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFYVEVPEI 145
EN GL+ +++ D +A +KKE L + HS I+Y F K+FY EI
Sbjct: 166 ENPTAGLQQEESDQEIDYDEDGNPIAPLKKKEIDPLPPIGHSKIDYESFEKNFYNVHEEI 225
Query: 146 ARMTPEEVEKYKE 158
A + ++V+ ++
Sbjct: 226 ANLNKQQVDNLRK 238
>gi|325185113|emb|CCA19605.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 711
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
Q + L +DH+ IEY F+K+FY+ EIA MT ++V+ +
Sbjct: 126 QMEVLQALDHTKIEYEAFQKNFYIPAAEIASMTTDQVKTLR 166
>gi|344301469|gb|EGW31781.1| hypothetical protein SPAPADRAFT_155409 [Spathaspora passalidarum
NRRL Y-27907]
Length = 839
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 102 EQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV-EKYKEVD 160
+Q+ L ++ L +K KEL +DH+ Y PFRK FY + E+ +T E++ E KE+
Sbjct: 184 KQQKLLTSLTKLQTK-GKELKPIDHTLETYAPFRKSFYQQPYELQMLTQEQISEIRKELG 242
Query: 161 N 161
N
Sbjct: 243 N 243
>gi|119495979|ref|XP_001264763.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|143359979|sp|A1D373.1|PRP5_NEOFI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|119412925|gb|EAW22866.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 1193
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
AEE++DPLDAFM + E P TT G++ K ++ +
Sbjct: 431 AEEEVDPLDAFMSELAE-----TAPPKKTT--------GAR---------FAKAKEQQPE 468
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
+E+ L E + +D + A +K+KK++ VDH +EY PFRK FY E
Sbjct: 469 AMFGDEHDVDLTAVGEGDADDFLAIANK--AKKKKDIPAVDHEKMEYEPFRKKFYTEPSN 526
Query: 145 IARMTPEEVEKYK 157
+A MT EE +
Sbjct: 527 LAEMTDEEAASLR 539
>gi|410903051|ref|XP_003965007.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Takifugu
rubripes]
Length = 872
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 22 GKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVE 81
G ++ + DPLDAFM V + K D++ + K + I + ++ +
Sbjct: 100 GGGSDSEDDPLDAFMAEVENQAAK----------DMRKLEEKEKKSAKGIRDDIEEEDEQ 149
Query: 82 KAKGELMEEN-QDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 137
+A M EN GL EE+ D S + S KK L +DHS I+Y PF K+
Sbjct: 150 EAYFRYMAENPTAGLTLEEEEDNIDYDSDGNPIPSTTKKIILPLPPIDHSEIDYPPFEKN 209
Query: 138 FYVEVPEIARMTPEEVEKYKE 158
FY E E++ + +V + ++
Sbjct: 210 FYNEHEELSSLNGTQVVELRQ 230
>gi|195493240|ref|XP_002094331.1| GE20258 [Drosophila yakuba]
gi|194180432|gb|EDW94043.1| GE20258 [Drosophila yakuba]
Length = 789
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
++ D DPL+ FM G+++++ K + P KP I + + E++
Sbjct: 128 SDSDEDPLEQFMAGINQQVEKEKRQQAP------------KPPTQAIRGDIDDEDDEESY 175
Query: 85 GELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFYV 140
M+EN + GL +++ + +A +KK+ L + HS IEY PF K+FY
Sbjct: 176 YRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPTIYHSEIEYEPFEKNFYT 235
Query: 141 EVPEIARMTPEEVEKYKE 158
+ +IA + E+V + +
Sbjct: 236 QHDDIAALDEEQVRELRR 253
>gi|46108284|ref|XP_381200.1| hypothetical protein FG01024.1 [Gibberella zeae PH-1]
Length = 1227
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 42/135 (31%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E+D+DPLDAFM AD+K D V++ + +
Sbjct: 476 EDDVDPLDAFM------------------ADLKQTD--------------VRQPTKTSTT 503
Query: 86 ELMEENQDGLEYSSEEEQE-------DLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
+ ++E + Y S++E + D ++ A A ++KK++ +D+S IE P RK+F
Sbjct: 504 QKIQEPE---AYFSDDEYDFNKKDEGDASALLAITAKRKKKDIPTIDYSKIEIEPIRKNF 560
Query: 139 YVEVPEIARMTPEEV 153
+ E E++ +T EV
Sbjct: 561 WHEPAELSLLTEAEV 575
>gi|410516921|sp|Q4IP34.2|PRP5_GIBZE RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
Length = 1207
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 42/135 (31%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
E+D+DPLDAFM AD+K D V++ + +
Sbjct: 456 EDDVDPLDAFM------------------ADLKQTD--------------VRQPTKTSTT 483
Query: 86 ELMEENQDGLEYSSEEEQE-------DLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
+ ++E + Y S++E + D ++ A A ++KK++ +D+S IE P RK+F
Sbjct: 484 QKIQEPE---AYFSDDEYDFNKKDEGDASALLAITAKRKKKDIPTIDYSKIEIEPIRKNF 540
Query: 139 YVEVPEIARMTPEEV 153
+ E E++ +T EV
Sbjct: 541 WHEPAELSLLTEAEV 555
>gi|440632990|gb|ELR02909.1| hypothetical protein GMDG_01131 [Geomyces destructans 20631-21]
Length = 1194
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
EE+Q G + + E ED+ + + + ++KK+L ++++ ++ PFRK+FY E E+A M
Sbjct: 478 EEDQAG---TLDSEPEDILAMVSKV--RKKKDLPVINYAKLDLAPFRKNFYTEPAELAGM 532
Query: 149 T 149
T
Sbjct: 533 T 533
>gi|159131126|gb|EDP56239.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus A1163]
Length = 1211
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
AEE++DPLDAFM + E P TT G++ K ++ +
Sbjct: 449 AEEEVDPLDAFMSELAE-----TAPPKKTT--------GAR---------FTKAKDQQPE 486
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
+E+ L E + +D + A +K+KK++ VDH +EY PFRK FY E
Sbjct: 487 AMFGDEHDVDLTAVGEGDADDFLAIANK--AKKKKDIPTVDHEKMEYEPFRKKFYTEPSN 544
Query: 145 IARMTPEEVEKYK 157
+A MT EE +
Sbjct: 545 LAEMTDEEAASLR 557
>gi|70995215|ref|XP_752371.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus Af293]
gi|74672743|sp|Q4WT99.1|PRP5_ASPFU RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|66850006|gb|EAL90333.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus Af293]
Length = 1211
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
AEE++DPLDAFM + E P TT G++ K ++ +
Sbjct: 449 AEEEVDPLDAFMSELAE-----TAPPKKTT--------GAR---------FTKAKDQQPE 486
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
+E+ L E + +D + A +K+KK++ VDH +EY PFRK FY E
Sbjct: 487 AMFGDEHDVDLTAVGEGDADDFLAIANK--AKKKKDIPTVDHEKMEYEPFRKKFYTEPSN 544
Query: 145 IARMTPEEVEKYK 157
+A MT EE +
Sbjct: 545 LAEMTDEEAASLR 557
>gi|347841781|emb|CCD56353.1| similar to pre-mRNA-processing ATP-dependent RNA helicase PRP5
[Botryotinia fuckeliana]
Length = 1179
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 115 SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
+++KK++ +++S ++ PFRK+FY E E+A MT E+
Sbjct: 494 ARKKKDIPTINYSALDLPPFRKNFYTEPTELAEMTEAEI 532
>gi|154315049|ref|XP_001556848.1| hypothetical protein BC1G_04866 [Botryotinia fuckeliana B05.10]
gi|160419161|sp|A6RW79.1|PRP5_BOTFB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
Length = 1151
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 115 SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
+++KK++ +++S ++ PFRK+FY E E+A MT E+
Sbjct: 494 ARKKKDIPTINYSALDLPPFRKNFYTEPTELAEMTEAEI 532
>gi|164656240|ref|XP_001729248.1| hypothetical protein MGL_3715 [Malassezia globosa CBS 7966]
gi|159103138|gb|EDP42034.1| hypothetical protein MGL_3715 [Malassezia globosa CBS 7966]
Length = 885
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 38/156 (24%)
Query: 9 DSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAG 68
D++ED ++ N TA+ DPLDA+MQ + E++ + + G
Sbjct: 111 DTEEDSR-SRAVNEATAD---DPLDAYMQELESEVQ-------------RESHEHGHDGG 153
Query: 69 VVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEE-------QEDLTSTAANLASKQKKEL 121
+ ++ G EE ++G E ++++ ED+ + A +KK L
Sbjct: 154 LEVLMGDD------------EEPREGTETHADDDVDIDSIRAEDILALAHR--GSKKKHL 199
Query: 122 SKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
VDH+ I Y PFRK FY EIA M+ + E+ +
Sbjct: 200 PAVDHAAIAYEPFRKAFYHAPDEIASMSSADAERLR 235
>gi|348509262|ref|XP_003442169.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oreochromis
niloticus]
Length = 909
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 20 ENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKS 79
++G ++ + DPLDAFM V + K K + K A I + ++
Sbjct: 102 QSGGGSDSEDDPLDAFMAEVENQAAKDMKKLEEKEKEKKSAKG--------IRDDIEEED 153
Query: 80 VEKAKGELMEEN-QDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFR 135
++A M EN GL EEE D S + S KK L +DHS I+Y PF
Sbjct: 154 EQEAYFRYMAENPTAGLTQEEEEENIDYDSDGNPIPSTTKKIIMPLPPIDHSEIDYPPFE 213
Query: 136 KDFYVEVPEIARMTPEEV 153
K+FY E E++ +T +V
Sbjct: 214 KNFYEEHEELSSLTGTQV 231
>gi|302696669|ref|XP_003038013.1| hypothetical protein SCHCODRAFT_43190 [Schizophyllum commune H4-8]
gi|300111710|gb|EFJ03111.1| hypothetical protein SCHCODRAFT_43190, partial [Schizophyllum
commune H4-8]
Length = 674
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 125 DHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
DHS ++Y PFRK+FY+ P+IA MT +E + +
Sbjct: 30 DHSRMKYEPFRKEFYIPPPDIASMTDDEADLLR 62
>gi|321252102|ref|XP_003192288.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|317458756|gb|ADV20501.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
Length = 1063
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
+KK+L DHS I+Y PFRK FYV E+ M EE E
Sbjct: 336 RKKDLPPPDHSKIDYEPFRKAFYVPPVEVLEMDEEEAE 373
>gi|167525138|ref|XP_001746904.1| p68DDX5 RNA helicase [Monosiga brevicollis MX1]
gi|163774684|gb|EDQ88311.1| p68DDX5 RNA helicase [Monosiga brevicollis MX1]
Length = 487
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
L VD +E PF KDFYVE PE A T E+V+ ++
Sbjct: 8 LRSVDWKQVELTPFTKDFYVEHPETAAQTDEDVQNFR 44
>gi|58263430|ref|XP_569125.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108386|ref|XP_777144.1| hypothetical protein CNBB3750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819236|sp|P0CQ99.1|PRP5_CRYNB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|338819237|sp|P0CQ98.1|PRP5_CRYNJ RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|50259829|gb|EAL22497.1| hypothetical protein CNBB3750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223775|gb|AAW41818.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1072
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
+KK+L DHS I+Y PFRK FYV E+ M EE E
Sbjct: 345 RKKDLPPPDHSKIDYEPFRKAFYVPPVEVLEMDEEEAE 382
>gi|194868558|ref|XP_001972305.1| GG13958 [Drosophila erecta]
gi|190654088|gb|EDV51331.1| GG13958 [Drosophila erecta]
Length = 786
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
++ D DPL+ FM G+++++ K + P KP + + + E++
Sbjct: 126 SDSDDDPLEQFMAGINQQVEKEKRQQAP------------KPPTQAVRGDIDDEDDEESY 173
Query: 85 GELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFYV 140
M+EN + GL +++ + +A +KK+ L + HS IEY PF K+FY
Sbjct: 174 YRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPTIYHSEIEYEPFEKNFYT 233
Query: 141 EVPEIARMTPEEVEKYKEV 159
+ +IA + E+V + +
Sbjct: 234 QHDDIAALDEEQVRELRRT 252
>gi|294886917|ref|XP_002771918.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239875718|gb|EER03734.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 521
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
L D S I+ F K+FY+E P+++R+TPEEV+ +
Sbjct: 62 LHSQDWSHIQLTKFEKNFYIEHPDVSRLTPEEVDNIR 98
>gi|401410444|ref|XP_003884670.1| hypothetical protein NCLIV_050680 [Neospora caninum Liverpool]
gi|325119088|emb|CBZ54640.1| hypothetical protein NCLIV_050680 [Neospora caninum Liverpool]
Length = 578
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVD 160
+L +VD ++ +PF K+FYVE P +A M+ EE ++ + +
Sbjct: 72 KLQRVDWKAVDLVPFEKNFYVEHPAVASMSTEEADRIRRAN 112
>gi|195552710|ref|XP_002076525.1| GD17585 [Drosophila simulans]
gi|194202136|gb|EDX15712.1| GD17585 [Drosophila simulans]
Length = 786
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
++ D DPL+ FM G+++++ K + P KP + + + E++
Sbjct: 125 SDSDEDPLEQFMAGINQQVEKEKRQQAP------------KPPTQAVRGDIDDEDDEESY 172
Query: 85 GELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFYV 140
M+EN + GL +++ + +A +KK+ L + HS IEY PF K+FY
Sbjct: 173 YRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFEKNFYT 232
Query: 141 EVPEIARMTPEEVEKYKEV 159
+ +IA + E+V + +
Sbjct: 233 QHDDIAALDEEQVRELRRT 251
>gi|342887883|gb|EGU87311.1| hypothetical protein FOXB_02187 [Fusarium oxysporum Fo5176]
Length = 1214
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 105 DLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
D + A A ++KK++ +D+S IE P RK+F+VE E++ +T EV
Sbjct: 514 DANALLAMTAKRKKKDIPAIDYSKIEIEPIRKNFWVEPAELSLLTEAEV 562
>gi|403339941|gb|EJY69232.1| hypothetical protein OXYTRI_10149 [Oxytricha trifallax]
Length = 1032
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 84 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSK--------VDHSTIEYLPFR 135
K E+M + D E + + QE L NL ++ +++ K +DH+ IEY F
Sbjct: 177 KDEVMSDGIDDSEQALLDRQEALLDGNGNLDYEKLRQMEKKGIQALNTLDHTQIEYDSFE 236
Query: 136 KDFYVEVPEIARMTPEEV 153
K+FY E P+I M+ E+V
Sbjct: 237 KNFYQEHPDITAMSFEDV 254
>gi|24662330|ref|NP_648413.1| CG6418 [Drosophila melanogaster]
gi|7294797|gb|AAF50131.1| CG6418 [Drosophila melanogaster]
gi|16769458|gb|AAL28948.1| LD32732p [Drosophila melanogaster]
gi|220946788|gb|ACL85937.1| CG6418-PB [synthetic construct]
Length = 791
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
++ D DPL+ FM G+++++ K + P KP + + + E++
Sbjct: 128 SDSDEDPLEQFMAGINQQVEKEKRQQAP------------KPPTQAVRGDIDDEDDEESY 175
Query: 85 GELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFYV 140
M+EN + GL +++ + +A +KK+ L + HS IEY PF K+FY
Sbjct: 176 YRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFEKNFYT 235
Query: 141 EVPEIARMTPEEVEKYKEV 159
+ +IA + E+V + +
Sbjct: 236 QHDDIAALDDEQVRELRRT 254
>gi|67521618|ref|XP_658870.1| hypothetical protein AN1266.2 [Aspergillus nidulans FGSC A4]
gi|74657573|sp|Q5BDW4.1|PRP5_EMENI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|40746703|gb|EAA65859.1| hypothetical protein AN1266.2 [Aspergillus nidulans FGSC A4]
gi|259488412|tpe|CBF87827.1| TPA: Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC
3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BDW4]
[Aspergillus nidulans FGSC A4]
Length = 1173
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
++ VDH+ +EY PFR+ FY E ++A+M+ EE +
Sbjct: 486 DIPTVDHNKVEYEPFRRKFYTEPSDLAQMSEEEAANLR 523
>gi|391865375|gb|EIT74659.1| RNA helicase [Aspergillus oryzae 3.042]
Length = 1186
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 6 LEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSK 65
+ D S++ D + N + EE++DPLDAFM + E K A A KP
Sbjct: 410 MSDASNQKAPDKMEVNAQE-EEEVDPLDAFMSELAESA-PPKKTAGAKFAKAKP------ 461
Query: 66 PAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVD 125
++ + +EN + + + +D + A +K+KK++ VD
Sbjct: 462 ---------------QQPEALFGDENDMDMTAVGDGDADDFLAIANK--AKKKKDIPTVD 504
Query: 126 HSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
H +EY PFRK FY E ++A M+ EE +
Sbjct: 505 HKKVEYEPFRKKFYTEPSDLAAMSEEEAASLR 536
>gi|170047345|ref|XP_001851185.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167869774|gb|EDS33157.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 579
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 115 SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
S K+L K++ S +E +PF+KDFY E P I + +V+++ E
Sbjct: 146 SMDGKQLQKINWSKMELVPFKKDFYREHPAIKNRSSRDVDRFLE 189
>gi|350426308|ref|XP_003494399.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus impatiens]
Length = 774
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 25/163 (15%)
Query: 1 MKKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
MKK ++DSD +E DPLDAFM G+ E+++ N A + K
Sbjct: 99 MKKSTSKEDSDSEE---------------DPLDAFMAGIDAEVKRNNYEAQLAEDERKEE 143
Query: 61 DSGSKPAGVVIVTGVVKKSVEKAKGELMEEN-QDGLEYSSEEEQEDLTSTAANLASKQKK 119
S A + + E++ MEEN GL+ +++ D +A +KK
Sbjct: 144 KSKGFRADID------GEDDEESYYRYMEENPTAGLQQEESDQEIDYDEDGNPIAPPKKK 197
Query: 120 E---LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
+ L VDHS I+Y F K+FY EIA ++ ++++ K+
Sbjct: 198 DIDPLPPVDHSEIKYESFEKNFYNVHDEIANLSKQQIDDLKKT 240
>gi|241953695|ref|XP_002419569.1| pre-mRNA-processing ATP-dependent RNA helicase, putative [Candida
dubliniensis CD36]
gi|223642909|emb|CAX43164.1| pre-mRNA-processing ATP-dependent RNA helicase, putative [Candida
dubliniensis CD36]
Length = 873
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE-VDN 161
++L ST + KEL +DHS Y FRK FY E E++ ++ E+VE ++ +DN
Sbjct: 210 QELISTKLTKLQNKGKELQSIDHSHENYQEFRKVFYNETYELSSLSNEQVELIRQDLDN 268
>gi|407926275|gb|EKG19243.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 1029
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 29/133 (21%)
Query: 19 DENGKTAEEDI---DPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGV 75
D+ T ED+ DPLDAFM +N A P A
Sbjct: 267 DQVDATTHEDVEEPDPLDAFMS-------DLNSIAAPKKA-----------------PKT 302
Query: 76 VKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFR 135
+ K+ +K L +++D E ++E + ED+ + A K K + +VDHS + Y R
Sbjct: 303 MSKTGQKEPVALYSDDEDLREAAAESDPEDVLAMATK--KKAKSTIGQVDHSKMNYQDVR 360
Query: 136 KDFYVEVPEIARM 148
+FY E E+A M
Sbjct: 361 FNFYTEPQELAEM 373
>gi|255732942|ref|XP_002551394.1| hypothetical protein CTRG_05692 [Candida tropicalis MYA-3404]
gi|240131135|gb|EER30696.1| hypothetical protein CTRG_05692 [Candida tropicalis MYA-3404]
Length = 880
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 104 EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK-EVDN 161
++L S+ + KEL +DH+ Y P RK FY E E++ ++PE+V + E+DN
Sbjct: 217 QNLISSKLTKLQNKGKELQSIDHAQENYEPVRKSFYQEPYELSSLSPEDVITMRQELDN 275
>gi|331214536|ref|XP_003319949.1| hypothetical protein PGTG_00861 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309298939|gb|EFP75530.1| hypothetical protein PGTG_00861 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1329
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 27/139 (19%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
+E++DPLDA+M GV +E+ KVN D K + G KK +E+
Sbjct: 514 QEEVDPLDAYMSGVTDEVTKVN-------------DRDKKKMNQLAAGG--KKVLEEDDE 558
Query: 86 ELMEENQDGLEYSSEEE-------QEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
E+ Q G SE+E ED+ + AA +KK+L+ VDH I Y PFRK F
Sbjct: 559 HNDEDEQAG---GSEDEIDKTNLRPEDIMALAA--KKLKKKDLAPVDHQKITYEPFRKAF 613
Query: 139 YVEVPEIARMTPEEVEKYK 157
Y E+ M+ E+ E +
Sbjct: 614 YHPPAEVEEMSDEQAENIR 632
>gi|340500096|gb|EGR26997.1| hypothetical protein IMG5_203370 [Ichthyophthirius multifiliis]
Length = 661
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
K K L K DHS ++Y F K+FY+E P+I + ++EK K+
Sbjct: 246 KNFKLLDKFDHSKVKYQQFTKNFYIEHPDIQSLQQTQIEKIKK 288
>gi|308807515|ref|XP_003081068.1| DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
gi|116059530|emb|CAL55237.1| DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
Length = 1030
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+L KV+H I+Y P +KDFY+E EI+ MT + +
Sbjct: 275 KLGKVNHDEIDYEPVKKDFYIESKEISSMTKAQTRALR 312
>gi|307109616|gb|EFN57854.1| hypothetical protein CHLNCDRAFT_6836, partial [Chlorella
variabilis]
Length = 461
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
L+ ++H I Y F KDFY E P+IA +T +V +Y+
Sbjct: 10 LAALEHDGIAYSEFNKDFYEEAPDIAALTHAQVAEYRR 47
>gi|124506095|ref|XP_001351645.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
gi|23504573|emb|CAD51452.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
Length = 1490
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 112 NLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
N K K+L +V+H I+Y+P +K+ YV+V EI M +V+ +++
Sbjct: 660 NGMKKMNKKLLEVNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRK 706
>gi|198432373|ref|XP_002121386.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
[Ciona intestinalis]
Length = 727
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 33/149 (22%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP-ADSGSKPAGVVIVTGVVKKSVEKA- 83
EED DPL+AFM G+ +E+ +NK A T + K D G V+ +E+
Sbjct: 96 EED-DPLEAFMAGIQQEVTTLNKKAEITEKEEKQKTDRG------------VRDDLEELD 142
Query: 84 --------------KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTI 129
G++ +++D +EY +E+ + + N K L V HS I
Sbjct: 143 SEELYYKYMDENPDAGKMFLDDEDPVEY--DEDGNPIQTIVPN--KKMIDPLPVVYHSEI 198
Query: 130 EYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+Y PF K+FY E EI +T + V+ +
Sbjct: 199 DYPPFEKNFYREHDEIKSLTNDGVDSLRR 227
>gi|169781778|ref|XP_001825352.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Aspergillus
oryzae RIB40]
gi|91207409|sp|Q2U2J6.1|PRP5_ASPOR RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|83774094|dbj|BAE64219.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1186
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
++ VDH +EY PFRK FY E ++A M+ EE +
Sbjct: 499 DIPTVDHKKVEYEPFRKKFYTEPSDLAAMSEEEAASLR 536
>gi|147904603|ref|NP_001080569.1| ATP-dependent RNA helicase DDX42 [Xenopus laevis]
gi|82209788|sp|Q7ZY47.1|DDX42_XENLA RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|27696431|gb|AAH43977.1| Ddx42-prov protein [Xenopus laevis]
Length = 947
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
G + EE +D LEY S+ + A + L +DH+ IEY PF K+FY E
Sbjct: 167 GLVPEEEEDNLEYDSD------GNPIAPTTKRIIDPLPPIDHTEIEYPPFEKNFYEEHEA 220
Query: 145 IARMTPEEVEKYKE 158
I TP+++ + +
Sbjct: 221 ITSQTPQQITELRH 234
>gi|66805957|ref|XP_636700.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
gi|74896924|sp|Q54IV3.1|DDX42_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx42; AltName:
Full=DEAD box protein 42
gi|60465098|gb|EAL63199.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
Length = 986
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 14 ENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVT 73
E+D+K++N + +++IDPLDAFM+ V+ + N ++ + + +
Sbjct: 137 ESDSKNQN-EDEDDEIDPLDAFMENVNAQAAIDNSKSIEKGQQQQQSLKSKRDDIDNEDD 195
Query: 74 GVVKKSVEK---AKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK------ELSKV 124
+ + + A ++ D ++YSS ++ + +L + Q K L +
Sbjct: 196 EEIFYKLRQKQLANKSSKQQQDDDVDYSSLDDDDGYFDDEESLKNGQSKGKRIIEPLPPI 255
Query: 125 DHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
DHS EY+ F K FY E P+IA +T E+V
Sbjct: 256 DHSKEEYIEFNKIFYEEHPDIANLTEEQV 284
>gi|170595924|ref|XP_001902572.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158589680|gb|EDP28579.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 658
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
L +DH+T+EY PF K+FY E +I MT +V
Sbjct: 83 LQSIDHTTVEYAPFNKNFYHEHEQIKSMTSIKV 115
>gi|401881497|gb|EJT45796.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 2479]
gi|406696503|gb|EKC99788.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 1120
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 38/156 (24%)
Query: 9 DSDEDENDN-KDENGKTA-------EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
D DE+E+D K E G A EE+ DPLDAFM+ +E++ VN
Sbjct: 304 DGDENEDDVVKVEAGADADSKMDVDEEEEDPLDAFMRQNAQEVKSVN------------- 350
Query: 61 DSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASK--QK 118
V + ++ E ++ + D + EE+ LA+ +K
Sbjct: 351 ---------------VSDAKKQGYAEELDSDDDVEVRNKAEEELAKAEALLQLAASKTRK 395
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
K+L DH I+Y PFR++FY E+ M EE E
Sbjct: 396 KDLPTPDHDAIDYEPFRRNFYTAPAEVLDMDEEEAE 431
>gi|393246045|gb|EJD53554.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 849
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 124 VDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
VDHS I Y PFRK FY P++A M+ EE + +
Sbjct: 133 VDHSKINYEPFRKAFYHPPPDVAEMSEEEADLLR 166
>gi|340723638|ref|XP_003400196.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus
terrestris]
Length = 774
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Query: 1 MKKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
MKK ++DSD +E DPLDAFM G+ E+++ N A + K
Sbjct: 99 MKKSTSKEDSDSEE---------------DPLDAFMAGIDAEVKRNNYEAQLAEDERKEE 143
Query: 61 DSGSKPAGVVIVTGVVKKSVEKAKGELMEEN-QDGLEYSSEEEQEDLTSTAANLASKQKK 119
S A + + E++ MEEN GL+ +++ D +A +KK
Sbjct: 144 KSKGFRADID------GEDDEESYYRYMEENPTAGLQQEESDQEIDYDEDGNPIAPPKKK 197
Query: 120 E---LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
+ L VDHS I+Y F K+FY EIA + ++++ K+
Sbjct: 198 DIDPLPPVDHSEIKYESFEKNFYNVHDEIANLNKQQIDDLKKT 240
>gi|332025702|gb|EGI65860.1| ATP-dependent RNA helicase DDX42 [Acromyrmex echinatior]
Length = 752
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 26/163 (15%)
Query: 1 MKKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
MKK +DDSD +E D LDAFM G+ E+++ T +
Sbjct: 99 MKKSATKDDSDSEE---------------DTLDAFMAGIDAEVKR-------NTYAAQRG 136
Query: 61 DSGSKPAGVVIVTGVVKKSVEKAKGELMEEN-QDGLEYSSEEEQEDLTSTAANLASKQKK 119
D+ + + + E++ MEEN GL+ +++ + +A +KK
Sbjct: 137 DNRKEDKSKGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQEIEYDEDGNPIAPPKKK 196
Query: 120 E---LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
E L +DHS IEY F K+FY EIA ++ ++++ K+
Sbjct: 197 EIDPLPAIDHSEIEYESFEKNFYNVHEEIASLSKQQIDDLKKT 239
>gi|294893710|ref|XP_002774608.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239880001|gb|EER06424.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 520
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
L D S I+ F K+FY+E P ++R+TPEEV+ +
Sbjct: 57 LHSQDWSHIQLTKFEKNFYIEHPNVSRLTPEEVDNIR 93
>gi|156094444|ref|XP_001613259.1| ATP-dependent RNA helicase [Plasmodium vivax Sal-1]
gi|148802133|gb|EDL43532.1| ATP-dependent RNA helicase, putative [Plasmodium vivax]
Length = 1341
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 112 NLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
N K K+L +V+ +EYLP +K+ YV+V EI M +V+ +++
Sbjct: 606 NALKKTNKKLLQVNRDQVEYLPIKKNIYVQVSEITNMKESDVDLFRK 652
>gi|299471751|emb|CBN76972.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1339
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 115 SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEE 152
S +KKEL VDHS I Y+ RK+ Y+ +P+ M EE
Sbjct: 677 SMKKKELKPVDHSKISYISLRKNLYI-IPKALAMASEE 713
>gi|313221076|emb|CBY31906.1| unnamed protein product [Oikopleura dioica]
Length = 604
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 17/138 (12%)
Query: 8 DDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPA 67
D + E N+ + G E++IDPLDAFM V+ ++K +V ++S K
Sbjct: 68 DPFNPTEEQNQAKAGGDDEDEIDPLDAFM-AVNNAKAAIDK------KNVGKSNSKQK-- 118
Query: 68 GVVIVTGVVKKSVEKAKGELMEENQDG---LEYSSEEEQEDLTSTAANLASKQKKE---L 121
+ + KK E+ + ++ N + ++ EE E++T A+K KKE L
Sbjct: 119 --ALRQDIEKKDSEEQFYDYIKANPNAGKAFTHTEEEAGEEITYDEYGNATKVKKEIDPL 176
Query: 122 SKVDHSTIEYLPFRKDFY 139
+ HS IEY F+K+FY
Sbjct: 177 PAISHSEIEYPSFQKNFY 194
>gi|238498592|ref|XP_002380531.1| DEAD/DEAH box RNA helicase [Aspergillus flavus NRRL3357]
gi|220693805|gb|EED50150.1| DEAD/DEAH box RNA helicase [Aspergillus flavus NRRL3357]
Length = 1201
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
++ VDH +EY PFRK FY E ++A M+ EE +
Sbjct: 514 DIPTVDHKKVEYEPFRKKFYTEPSDLAAMSEEEAASLR 551
>gi|301101090|ref|XP_002899634.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262103942|gb|EEY61994.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 456
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 113 LASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+A K + L+ +DHST+ Y PFRK FY E + +EV +
Sbjct: 1 MAKKVMEVLTPIDHSTVTYEPFRKSFYSAHSETCALKAQEVANLR 45
>gi|225442260|ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
gi|297743075|emb|CBI35942.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYKE 158
PF K+FYVE P +A M+ +EVE+Y+E
Sbjct: 59 PFEKNFYVESPAVAAMSEKEVEQYRE 84
>gi|121701983|ref|XP_001269256.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143359917|sp|A1CQA9.1|PRP5_ASPCL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|119397399|gb|EAW07830.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 1192
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
++ V+H +EY PFRK FY E +A+MT EE +
Sbjct: 502 DIPTVNHEKVEYEPFRKKFYTEPSNLAQMTDEEAASLR 539
>gi|71652834|ref|XP_815066.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70880092|gb|EAN93215.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 628
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK 155
K+ ++L VDHSTI+Y RK+FYV P++ + +E+++
Sbjct: 243 KRLRKLQYVDHSTIQYPHIRKEFYVAPPDVKDLDADELKR 282
>gi|380022612|ref|XP_003695134.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX42-like [Apis florea]
Length = 772
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 25/158 (15%)
Query: 1 MKKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
MKK ++DSD +E DPLDAFM G+ E++K N A + K
Sbjct: 99 MKKSTPKEDSDSEE---------------DPLDAFMAGIDAEVKKNNYEAQLAEDERKEE 143
Query: 61 DSGSKPAGVVIVTGVVKKSVEKAKGELMEEN-QDGLEYSSEEEQEDLTSTAANLASKQKK 119
S A + + E++ MEEN GL+ +++ + +A +KK
Sbjct: 144 KSKGFRADID------GEDDEESYYRYMEENPTAGLQQEESDQEIEYDEDGNPIAIPKKK 197
Query: 120 E---LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
E L +DHS I+Y F K+FY EIA + ++V+
Sbjct: 198 EIDPLPPIDHSEIQYESFEKNFYNVHDEIANLNKQQVD 235
>gi|71423512|ref|XP_812486.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70877271|gb|EAN90635.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 948
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK 155
K+ ++L VDHSTI+Y RK+FYV P++ + +E+++
Sbjct: 247 KRLRKLQYVDHSTIQYPHIRKEFYVAPPDVKDLDADELKR 286
>gi|171680181|ref|XP_001905036.1| hypothetical protein [Podospora anserina S mat+]
gi|170939717|emb|CAP64943.1| unnamed protein product [Podospora anserina S mat+]
Length = 1221
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 29/149 (19%)
Query: 12 EDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVI 71
E E+ +N +E+IDPLDAFM + ++ VP++ SKP G
Sbjct: 440 EKEDPTPADNAMDVDEEIDPLDAFMADLEQK--------VPSSG------ISSKPNG--- 482
Query: 72 VTGVVKKSVEKAKGELMEENQDGLE---YSSEEEQEDLTSTAANLASKQKKELSKVDHST 128
++A G+ E + Y E ++ D +S A A K+KK++ +D+S
Sbjct: 483 ---------DQANGKKAFEPEAYYSDDNYGYEADKADPSSILAMAAKKKKKDIPVIDYSK 533
Query: 129 IEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+E RK+F+VE ++++MT EE + +
Sbjct: 534 LELNKIRKNFWVEPLDLSQMTEEEANELR 562
>gi|71003590|ref|XP_756461.1| hypothetical protein UM00314.1 [Ustilago maydis 521]
gi|46096066|gb|EAK81299.1| hypothetical protein UM00314.1 [Ustilago maydis 521]
Length = 594
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 111 ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+NL S L VD +++ +PF K+FYVE P ++ + EV++Y+
Sbjct: 71 SNLGSN----LGAVDWNSVNLVPFEKNFYVEDPRVSNRSDSEVQQYR 113
>gi|221057183|ref|XP_002259729.1| ATP-dependent RNA helicase [Plasmodium knowlesi strain H]
gi|193809801|emb|CAQ40505.1| ATP-dependent RNA helicase, putative [Plasmodium knowlesi strain H]
Length = 1354
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 111 ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
N+ K K+ +V+ +EYLP +K+ YV+V EI M +V+ +++
Sbjct: 556 TNVLKKTNKKFLQVNREEVEYLPIKKNIYVQVSEITNMKDSDVDLFRK 603
>gi|66522071|ref|XP_624210.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Apis mellifera]
Length = 772
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 25/158 (15%)
Query: 1 MKKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA 60
MKK ++DSD +E DPLDAFM G+ E++K N A + K
Sbjct: 99 MKKSTPKEDSDSEE---------------DPLDAFMAGIDAEVKKNNYEAQLAEDERKEE 143
Query: 61 DSGSKPAGVVIVTGVVKKSVEKAKGELMEEN-QDGLEYSSEEEQEDLTSTAANLASKQKK 119
S A + + E++ MEEN GL+ +++ + +A +KK
Sbjct: 144 KSKGFRADID------GEDDEESYYRYMEENPTAGLQQEESDQEIEYDEDGNPIAIPKKK 197
Query: 120 E---LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVE 154
E L +DHS I+Y F K+FY EIA + ++V+
Sbjct: 198 EIDPLPPIDHSEIQYESFEKNFYNVHDEIANLNKQQVD 235
>gi|407396183|gb|EKF27384.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 952
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK 155
K+ ++L VDHSTI+Y RK+FYV P++ + +E+++
Sbjct: 251 KRLRKLQYVDHSTIQYPHIRKEFYVAPPDVKDLDADELKR 290
>gi|183231239|ref|XP_650493.2| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|169802550|gb|EAL45107.2| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 722
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 104 EDLTSTAANLAS--KQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
EDL LA K+K EL VDH I+Y P K YVEVP+I
Sbjct: 66 EDLADYKDELAQIKKKKLELLDVDHKNIQYEPIHKALYVEVPDI 109
>gi|449703830|gb|EMD44199.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica KU27]
Length = 722
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 104 EDLTSTAANLAS--KQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
EDL LA K+K EL VDH I+Y P K YVEVP+I
Sbjct: 66 EDLADYKDELAQIKKKKLELLDVDHKNIQYEPIHKALYVEVPDI 109
>gi|402589428|gb|EJW83360.1| hypothetical protein WUBG_05727 [Wuchereria bancrofti]
Length = 373
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMT 149
L +DH+T+EY PF K+FY E +I MT
Sbjct: 218 LQSIDHTTVEYAPFNKNFYHEHEQIKSMT 246
>gi|399217255|emb|CCF73942.1| unnamed protein product [Babesia microti strain RI]
Length = 530
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 109 TAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
+++NL + L+ VD + +PF K+FYVE P+I+ MT + VE+++ +
Sbjct: 58 SSSNLGGR----LTIVDWKSENLVPFEKNFYVEHPKISAMTHQRVEEFRRL 104
>gi|148906344|gb|ABR16327.1| unknown [Picea sitchensis]
Length = 504
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 20/26 (76%)
Query: 132 LPFRKDFYVEVPEIARMTPEEVEKYK 157
+PF K+FYVE P IA MT +EV +Y+
Sbjct: 57 IPFEKNFYVETPGIASMTEDEVREYR 82
>gi|400601996|gb|EJP69621.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 1195
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 96 EYSSEEEQEDLTSTA--ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
+Y E +Q D ++A A ++KKE+ VD+S I+ P RK+F+VE E++ + EV
Sbjct: 475 DYGYEVDQNDADASAVLAMTNKRKKKEIPTVDYSKIDIQPIRKNFWVEPVELSELNETEV 534
Query: 154 EKYK 157
+ +
Sbjct: 535 AELR 538
>gi|332798300|ref|YP_004459799.1| hypothetical protein TepRe1_0289 [Tepidanaerobacter acetatoxydans
Re1]
gi|438001231|ref|YP_007270974.1| hypothetical protein TEPIRE1_3210 [Tepidanaerobacter acetatoxydans
Re1]
gi|332696035|gb|AEE90492.1| hypothetical protein TepRe1_0289 [Tepidanaerobacter acetatoxydans
Re1]
gi|432178025|emb|CCP24998.1| hypothetical protein TEPIRE1_3210 [Tepidanaerobacter acetatoxydans
Re1]
Length = 409
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 32 LDAFMQGVHEEMRKVNKPAVPTTADVKPAD 61
+ AFMQGV+E+M K+ P +PTT + P D
Sbjct: 184 MAAFMQGVNEDMIKLGIPPIPTTLGMAPLD 213
>gi|389584246|dbj|GAB66979.1| ATP-dependent RNA helicase [Plasmodium cynomolgi strain B]
Length = 1410
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 112 NLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
N K K++ +V+ +EYLP +K+ YV+V EI M +V+ +++
Sbjct: 568 NALKKTNKKMLQVNRDQVEYLPIKKNIYVQVSEITNMKESDVDLFRK 614
>gi|67594781|ref|XP_665880.1| ATP-dependent RNA helicase [Cryptosporidium hominis TU502]
gi|54656740|gb|EAL35651.1| ATP-dependent RNA helicase [Cryptosporidium hominis]
Length = 794
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 113 LASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVDN 161
L+ +KK + +++H I Y P K++Y EV EI ++ EV+ + +N
Sbjct: 12 LSLDKKKRIPEINHEVINYPPIIKNYYKEVNEIKKLKQHEVDHIRITNN 60
>gi|149242263|ref|XP_001526437.1| hypothetical protein LELG_02995 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032665|sp|A5E058.1|PRP5_LODEL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|146450560|gb|EDK44816.1| hypothetical protein LELG_02995 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 994
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVP-EIARMTPEEVEKYK-EVDN 161
KEL ++DH++IEY FRK FY +VP E++ M E++ + E+DN
Sbjct: 331 KELKEIDHTSIEYPKFRKHFY-QVPFEMSTMDNRELDMLRLELDN 374
>gi|407832745|gb|EKF98571.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 948
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEK 155
K+ ++L VDHST++Y RK+FYV P++ + +E+++
Sbjct: 247 KRLRKLQYVDHSTVQYPHIRKEFYVAPPDVKDLDADELKR 286
>gi|300120116|emb|CBK19670.2| unnamed protein product [Blastocystis hominis]
Length = 607
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 129 IEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ Y+P RKDFYVE P I +MT +E++ ++
Sbjct: 1 MNYIPIRKDFYVESPLITKMTDKEIDDIRD 30
>gi|326792152|ref|YP_004309973.1| hypothetical protein Clole_3079 [Clostridium lentocellum DSM 5427]
gi|326542916|gb|ADZ84775.1| Abortive infection protein [Clostridium lentocellum DSM 5427]
Length = 640
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 12 EDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVI 71
E E++ D N +TA ++ L+A EE ++K A+ AD++ ADS SKPA V+
Sbjct: 374 EQESNQVDLN-QTAIINLKDLEA-----TEEQEDLSKTAIIKVADLEAADSNSKPAKKVV 427
Query: 72 VT--GVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTI 129
+ GVV K E+ E G E+ S +Q T ++ S Q ++ + + + +
Sbjct: 428 DSKEGVVTKFKEEPSYMNHLERSLG-EFESIYKQITPTDPPIDILSFQGEKFNALVTNGM 486
Query: 130 EYLPFRKDFYVE 141
YLP Y++
Sbjct: 487 RYLPMNVPEYLK 498
>gi|367010490|ref|XP_003679746.1| hypothetical protein TDEL_0B04060 [Torulaspora delbrueckii]
gi|359747404|emb|CCE90535.1| hypothetical protein TDEL_0B04060 [Torulaspora delbrueckii]
Length = 847
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 85 GELMEENQDGLEYSSEEE-----QEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFY 139
GEL+EE+ + LE S +E+ ED A K KK++ ++ S + PFRK+FY
Sbjct: 162 GELLEEDGNDLELSGQEDDFDQRNEDDARYARMAKLKSKKKVREMQFSQDDLEPFRKNFY 221
Query: 140 VEVPEIARMTPEEVEKYK 157
++ E+ M+ E ++ +
Sbjct: 222 LQSDELNNMSESEAQELR 239
>gi|449265651|gb|EMC76814.1| putative ATP-dependent RNA helicase DDX17, partial [Columba livia]
Length = 481
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 132 LP-FRKDFYVEVPEIARMTPEEVEKYKE 158
LP F K+FYVE PE+AR+TP EVE+ +
Sbjct: 31 LPKFEKNFYVEHPEVARLTPYEVEELRR 58
>gi|115533344|ref|NP_001041194.1| Protein NHR-110, isoform a [Caenorhabditis elegans]
gi|373219694|emb|CCD69584.1| Protein NHR-110, isoform a [Caenorhabditis elegans]
Length = 326
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 51 VPTTAD----VKPADSGS----KPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEE 102
+P T + + P S S K + + ++ +VKK+V K M N D S
Sbjct: 28 IPNTVESQLCISPLVSFSNRREKSSKCIDISQIVKKAVAKLLNPAMIRNID-----STSN 82
Query: 103 QEDLTSTAANLASKQKKELSKVDHSTIEY 131
E LTS NL S QK+ + K+DH T+ +
Sbjct: 83 LEQLTSGFKNLQSGQKENIPKIDHITLAH 111
>gi|365987862|ref|XP_003670762.1| hypothetical protein NDAI_0F02010 [Naumovozyma dairenensis CBS 421]
gi|343769533|emb|CCD25519.1| hypothetical protein NDAI_0F02010 [Naumovozyma dairenensis CBS 421]
Length = 888
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 85 GELMEENQDGLEYSSEEEQ-------EDLTSTAANLASKQKKELSKVDHSTIEYLPFRKD 137
G++M+E+ D + S E+ E+ A K KK +S++ ++ E PF+K
Sbjct: 189 GDVMDEDDDQTKLSDEQATLADDKNLEENARYAKITKRKTKKFVSEIQYNAAELEPFQKQ 248
Query: 138 FYVEVPEIARMTPEEVEKYK 157
FYVE EI +M+ EVE+ +
Sbjct: 249 FYVEPEEIKQMSSAEVEELR 268
>gi|195326619|ref|XP_002030023.1| GM24798 [Drosophila sechellia]
gi|194118966|gb|EDW41009.1| GM24798 [Drosophila sechellia]
Length = 786
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNK---PAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEK 82
+ D DPL+ FM G+++++ K + P PT A + + + E+
Sbjct: 126 DSDEDPLEQFMAGINQQVEKEKRQQAPKAPTQA---------------VRGDIDDEDDEE 170
Query: 83 AKGELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDF 138
+ M+EN + GL +++ + +A +KK+ L + HS IEY PF K+F
Sbjct: 171 SYYRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFEKNF 230
Query: 139 YVEVPEIARMTPEEVEKYKEV 159
Y + +IA + E+V + +
Sbjct: 231 YTQHDDIAALDEEQVRELRRT 251
>gi|300123567|emb|CBK24839.2| unnamed protein product [Blastocystis hominis]
Length = 818
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 20/135 (14%)
Query: 5 NLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGS 64
N++ + DE + EN + ++++DPLD +MQ + ++++ ++ +
Sbjct: 49 NIDINQDELSKNACGENNQDEQDEMDPLDLYMQEIDTKLKQEAASRKAANQEIMEEEDTD 108
Query: 65 KPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKV 124
+ +E + E E+ G+ Y + + +T A NL + ++E+S
Sbjct: 109 -----------YNQLIEGERNE-APEDTSGIIYDEDGNPKKITKVAINLVTAIQREVS-- 154
Query: 125 DHSTIEYLPFRKDFY 139
Y P +KDFY
Sbjct: 155 ------YPPLKKDFY 163
>gi|326911972|ref|XP_003202329.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Meleagris gallopavo]
Length = 645
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EVE+ +
Sbjct: 39 FEKNFYVEHPEVARLTPYEVEELR 62
>gi|302318882|ref|NP_001032894.2| ATP-dependent RNA helicase DDX42 [Danio rerio]
Length = 908
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
L +DHS I+Y PF K+FY E EI+ +T EV
Sbjct: 202 LPPIDHSEIDYSPFEKNFYNEHEEISSLTGAEV 234
>gi|28396073|gb|AAO39199.1| nuclear receptor NHR-110 [Caenorhabditis elegans]
Length = 412
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 51 VPTTAD----VKPADSGS----KPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEE 102
+P T + + P S S K + + ++ +VKK+V K M N D S
Sbjct: 114 IPNTVESQLCISPLVSFSNRREKSSKCIDISQIVKKAVAKLLNPAMIRNID-----STSN 168
Query: 103 QEDLTSTAANLASKQKKELSKVDHSTIEY 131
E LTS NL S QK+ + K+DH T+ +
Sbjct: 169 LEQLTSGFKNLQSGQKENIPKIDHITLAH 197
>gi|195330800|ref|XP_002032091.1| GM23704 [Drosophila sechellia]
gi|194121034|gb|EDW43077.1| GM23704 [Drosophila sechellia]
Length = 699
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
+K+KG E N E S + DLT T + A+ K ++ + P K+FY
Sbjct: 172 DKSKGSSYEFNPPSSE--SNNDNGDLTGTI-DWAALNKASIAATAARWSKCPPLTKNFYK 228
Query: 141 EVPEIARMTPEEVEKYKEVDN 161
E PE+A +T E+E+ +E +N
Sbjct: 229 EAPEVANLTKSEIERIREENN 249
>gi|260783339|ref|XP_002586733.1| hypothetical protein BRAFLDRAFT_248039 [Branchiostoma floridae]
gi|229271857|gb|EEN42744.1| hypothetical protein BRAFLDRAFT_248039 [Branchiostoma floridae]
Length = 433
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 130 EYLP-FRKDFYVEVPEIARMTPEEVEKYKEVDN 161
E+ P +K+FY E P +A MTPEEVE++++ +N
Sbjct: 25 EHCPQIKKNFYFEDPGVANMTPEEVEEFRKANN 57
>gi|115533346|ref|NP_001041195.1| Protein NHR-110, isoform b [Caenorhabditis elegans]
gi|373219695|emb|CCD69585.1| Protein NHR-110, isoform b [Caenorhabditis elegans]
Length = 424
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 51 VPTTAD----VKPADSGS----KPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEE 102
+P T + + P S S K + + ++ +VKK+V K M N D S
Sbjct: 126 IPNTVESQLCISPLVSFSNRREKSSKCIDISQIVKKAVAKLLNPAMIRNID-----STSN 180
Query: 103 QEDLTSTAANLASKQKKELSKVDHSTIEY 131
E LTS NL S QK+ + K+DH T+ +
Sbjct: 181 LEQLTSGFKNLQSGQKENIPKIDHITLAH 209
>gi|15221998|ref|NP_175911.1| DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana]
gi|75333448|sp|Q9C718.1|RH20_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 20
gi|12321578|gb|AAG50841.1|AC073944_8 ethylene-responsive RNA helicase, putative [Arabidopsis thaliana]
gi|17065338|gb|AAL32823.1| Unknown protein [Arabidopsis thaliana]
gi|22136216|gb|AAM91186.1| unknown protein [Arabidopsis thaliana]
gi|332195071|gb|AEE33192.1| DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana]
Length = 501
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYKEV 159
PF K+FYVE P +A MT EVE+Y+++
Sbjct: 58 PFEKNFYVESPAVAAMTDTEVEEYRKL 84
>gi|297847866|ref|XP_002891814.1| hypothetical protein ARALYDRAFT_474570 [Arabidopsis lyrata subsp.
lyrata]
gi|297337656|gb|EFH68073.1| hypothetical protein ARALYDRAFT_474570 [Arabidopsis lyrata subsp.
lyrata]
Length = 501
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYKEV 159
PF K+FYVE P +A MT EVE+Y+++
Sbjct: 58 PFEKNFYVESPTVAAMTDTEVEEYRKL 84
>gi|449481826|ref|XP_002195734.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Taeniopygia
guttata]
Length = 655
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EVE+ +
Sbjct: 49 FEKNFYVEHPEVARLTPYEVEELR 72
>gi|357126556|ref|XP_003564953.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like
[Brachypodium distachyon]
Length = 496
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVEVP +A MT +EVE Y+
Sbjct: 53 FEKNFYVEVPSVAGMTADEVEAYR 76
>gi|345308872|ref|XP_003428757.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17-like [Ornithorhynchus anatinus]
Length = 842
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EVE+ +
Sbjct: 243 FEKNFYVEHPEVARLTPYEVEELR 266
>gi|118082784|ref|XP_416260.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Gallus
gallus]
Length = 655
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EVE+ +
Sbjct: 49 FEKNFYVEHPEVARLTPYEVEELR 72
>gi|388851757|emb|CCF54563.1| related to RNA helicase [Ustilago hordei]
Length = 1171
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 30 DPLDAFMQGVHEEMRKVN---KPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGE 86
DPLDAFM V ++ +VN + T+ D + +KP V++ E E
Sbjct: 356 DPLDAFMSTVKSQVAQVNAEDRRKAGTSGDA--SSKTNKPKAVILGQDDSDDEAEDPDEE 413
Query: 87 LMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIA 146
L E ++ G+ EDL + AA +KKEL+ VDH++++Y PF K FY EI
Sbjct: 414 LDELDRVGVA------TEDLLAIAAK--KVKKKELATVDHASVDYEPFCKVFYHPPAEIE 465
Query: 147 RMTPE 151
M+ E
Sbjct: 466 DMSEE 470
>gi|328875962|gb|EGG24326.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 806
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
L+ +DHS IEY F K FY E EI+ +TPE V + +
Sbjct: 278 LAALDHSKIEYEEFDKCFYEEHAEISALTPERVFQLRR 315
>gi|386765194|ref|NP_001246938.1| Rm62, isoform J [Drosophila melanogaster]
gi|383292518|gb|AFH06257.1| Rm62, isoform J [Drosophila melanogaster]
Length = 458
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ VD S + PF+K+FY E P +A +P EV++Y+E
Sbjct: 87 MRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYRE 122
>gi|386765196|ref|NP_001246939.1| Rm62, isoform K [Drosophila melanogaster]
gi|383292519|gb|AFH06258.1| Rm62, isoform K [Drosophila melanogaster]
Length = 485
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Q + VD S + PF+K+FY E P +A +P EV++Y+E
Sbjct: 83 QDLPMRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYRE 122
>gi|448520725|ref|XP_003868348.1| Prp5 pre-mRNA processing RNA-helicase [Candida orthopsilosis Co
90-125]
gi|380352688|emb|CCG25444.1| Prp5 pre-mRNA processing RNA-helicase [Candida orthopsilosis]
Length = 857
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 83 AKGELMEENQDGLEYSSEEEQEDLTSTAANLASK--QKKELSKVDHSTIEYLPFRKDFYV 140
A G L E + + S +E D+ + + +K KEL +DHS + Y PFRK+FY
Sbjct: 180 ANGALFEIQTNSTDDESADEDIDIQALIDSKLAKLNTTKELKDIDHSQVSYPPFRKNFY- 238
Query: 141 EVP-EIARMT 149
+VP E++ M+
Sbjct: 239 KVPFELSLMS 248
>gi|386765200|ref|NP_001246941.1| Rm62, isoform M [Drosophila melanogaster]
gi|383292521|gb|AFH06260.1| Rm62, isoform M [Drosophila melanogaster]
Length = 478
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ VD S + PF+K+FY E P +A +P EV++Y+E
Sbjct: 87 MRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYRE 122
>gi|195572651|ref|XP_002104309.1| GD18514 [Drosophila simulans]
gi|194200236|gb|EDX13812.1| GD18514 [Drosophila simulans]
Length = 713
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
+++KG E N E S+ + DLT T + A+ K ++ + P K+FY
Sbjct: 186 DRSKGSSYEFNPPSSE--SKNDNGDLTGTI-DWAALNKASIAATAARWSKCPPLTKNFYK 242
Query: 141 EVPEIARMTPEEVEKYKEVDN 161
E PE+A +T E+E+ +E +N
Sbjct: 243 EAPEVANLTKSEIERIREENN 263
>gi|386765198|ref|NP_001246940.1| Rm62, isoform L [Drosophila melanogaster]
gi|383292520|gb|AFH06259.1| Rm62, isoform L [Drosophila melanogaster]
Length = 473
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ VD S + PF+K+FY E P +A +P EV++Y+E
Sbjct: 87 MRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYRE 122
>gi|157126121|ref|XP_001654546.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108873390|gb|EAT37615.1| AAEL010402-PA [Aedes aegypti]
Length = 741
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 21/26 (80%)
Query: 136 KDFYVEVPEIARMTPEEVEKYKEVDN 161
K+FY E+PE+A MTPEEV +++ +N
Sbjct: 274 KNFYNELPEVANMTPEEVSEFRCANN 299
>gi|324504040|gb|ADY41744.1| ATP-dependent RNA helicase DDX42 [Ascaris suum]
Length = 808
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
L +DHS I Y PF K+FY E +IA M+ +V
Sbjct: 220 LPAIDHSAINYQPFNKNFYHEHEQIAAMSALKV 252
>gi|125979227|ref|XP_001353646.1| GA19578 [Drosophila pseudoobscura pseudoobscura]
gi|54642411|gb|EAL31160.1| GA19578 [Drosophila pseudoobscura pseudoobscura]
Length = 812
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 20/145 (13%)
Query: 25 AEEDIDPLDAFMQGVHEEMRK------VNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK 78
++ D DPL+ FM G+++++ K +P T ++ G +
Sbjct: 126 SDSDEDPLEQFMAGINQQVEKEKVRAATQQPKTTTAPQLEKGVRGDI----------DDE 175
Query: 79 SVEKAKGELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPF 134
E++ MEEN + GL +++ + +A +KK+ L + HS IEY PF
Sbjct: 176 DDEESYYRYMEENPNAGLRDDGSDQEIEYDEDGNPIAPPKKKDIDPLPTIYHSEIEYEPF 235
Query: 135 RKDFYVEVPEIARMTPEEVEKYKEV 159
K+FY EIA + E V + +
Sbjct: 236 EKNFYTAHEEIASLDEEGVRELRHT 260
>gi|346979464|gb|EGY22916.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
dahliae VdLs.17]
Length = 1182
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMT 149
++KKE+ VD+S IE+ P RK+F+ E E++ +T
Sbjct: 518 RRKKEIPIVDYSKIEFEPVRKNFWTEPAELSTLT 551
>gi|195171504|ref|XP_002026545.1| GL21821 [Drosophila persimilis]
gi|194111461|gb|EDW33504.1| GL21821 [Drosophila persimilis]
Length = 812
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 20/145 (13%)
Query: 25 AEEDIDPLDAFMQGVHEEMRK------VNKPAVPTTADVKPADSGSKPAGVVIVTGVVKK 78
++ D DPL+ FM G+++++ K +P T ++ G +
Sbjct: 126 SDSDEDPLEQFMAGINQQVEKEKVRAATQQPKTTTAPQLEKGVRGDI----------DDE 175
Query: 79 SVEKAKGELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPF 134
E++ MEEN + GL +++ + +A +KK+ L + HS IEY PF
Sbjct: 176 DDEESYYRYMEENPNAGLRDDGSDQEIEYDEDGNPIAPPKKKDIDPLPTIYHSEIEYEPF 235
Query: 135 RKDFYVEVPEIARMTPEEVEKYKEV 159
K+FY EIA + E V + +
Sbjct: 236 EKNFYTAHEEIASLDEEGVRELRHT 260
>gi|50927797|gb|AAH79483.1| Ddx42 protein [Danio rerio]
Length = 402
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 88 MEENQD-GLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVEVP 143
M EN GL EEE+ D S +A KK L +DHS I+Y PF K+FY E
Sbjct: 165 MAENPTAGLTQEEEEEEVDYDSDGNPIAPTTKKIIMPLPPIDHSEIDYSPFEKNFYNEHE 224
Query: 144 EIARMTPEEV 153
EI+ +T EV
Sbjct: 225 EISSLTGAEV 234
>gi|221482438|gb|EEE20786.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
Length = 1544
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
KK+L VDH Y P +K+ Y++V EI M EV+ ++
Sbjct: 916 KKQLPTVDHEASAYPPIKKNLYIQVKEITCMKDHEVDALRKT 957
>gi|221504486|gb|EEE30159.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 1544
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
KK+L VDH Y P +K+ Y++V EI M EV+ ++
Sbjct: 916 KKQLPTVDHEASAYPPIKKNLYIQVKEITCMKDHEVDALRKT 957
>gi|401397534|ref|XP_003880077.1| hypothetical protein NCLIV_005180 [Neospora caninum Liverpool]
gi|325114486|emb|CBZ50042.1| hypothetical protein NCLIV_005180 [Neospora caninum Liverpool]
Length = 1855
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
KK+L VDH Y P +K+ Y++V EI M EV+ ++
Sbjct: 891 KKQLPTVDHEASAYPPIKKNLYIQVKEITCMKDHEVDALRKT 932
>gi|237841393|ref|XP_002369994.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211967658|gb|EEB02854.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 1544
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 118 KKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEV 159
KK+L VDH Y P +K+ Y++V EI M EV+ ++
Sbjct: 916 KKQLPTVDHEASAYPPIKKNLYIQVKEITCMKDHEVDALRKT 957
>gi|91206542|sp|Q4PHU9.2|DBP2_USTMA RecName: Full=ATP-dependent RNA helicase DBP2
Length = 552
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
L VD +++ +PF K+FYVE P ++ + EV++Y+
Sbjct: 77 LGAVDWNSVNLVPFEKNFYVEDPRVSNRSDSEVQQYR 113
>gi|449019241|dbj|BAM82643.1| p68 RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 645
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 98 SSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
S E ++ + S ANL+ + + +D+ +PF ++FY E PE+A +PE V ++
Sbjct: 124 SRGETRDRMGSLGANLSDIDWTQANNLDN----LVPFERNFYQEHPEVAGRSPEHVASFR 179
Query: 158 E 158
+
Sbjct: 180 Q 180
>gi|302414752|ref|XP_003005208.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
albo-atrum VaMs.102]
gi|261356277|gb|EEY18705.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
albo-atrum VaMs.102]
Length = 1145
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 116 KQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMT 149
++KKE+ VD+S IE+ P RK+F+ E E++ +T
Sbjct: 460 RRKKEIPIVDYSKIEFEPVRKNFWTEPAELSALT 493
>gi|268568676|ref|XP_002640316.1| Hypothetical protein CBG12861 [Caenorhabditis briggsae]
Length = 213
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 87 LMEENQDGLEYSSEEEQEDLTSTA--ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
L+EE+Q+ LEY + +D+T A++ +KQ K+L KV T++Y RK E+
Sbjct: 112 LLEEDQNTLEYQIHQFLKDVTVYVWNAHIFTKQVKDLPKVYFITLDYFK-RKAESEEMKH 170
Query: 145 IARMTPEEVEKY 156
+ +M P ++ Y
Sbjct: 171 LVQMVPILLQTY 182
>gi|195069805|ref|XP_001997032.1| GH23229 [Drosophila grimshawi]
gi|193906224|gb|EDW05091.1| GH23229 [Drosophila grimshawi]
Length = 649
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEK-A 83
+E D DPL+ FM G+++++ K A A + S S P V G + ++ +
Sbjct: 142 SESDEDPLEQFMAGINQQVEKEKVRA----ATEQQQKSSSAPLEKKGVRGDIDDEDDEES 197
Query: 84 KGELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFY 139
MEEN + GL + + D +A +KK+ L + HS IEY PF ++FY
Sbjct: 198 YYRYMEENPNAGLRDEGSDPEIDYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFERNFY 257
Query: 140 VEVPEIARMTPEEVEKYKE 158
+IA++ ++V + +
Sbjct: 258 TPHEDIAQLDEDQVRELRR 276
>gi|24644485|ref|NP_731033.1| Rm62, isoform C [Drosophila melanogaster]
gi|24644487|ref|NP_731034.1| Rm62, isoform F [Drosophila melanogaster]
gi|45551833|ref|NP_731035.2| Rm62, isoform B [Drosophila melanogaster]
gi|10727151|gb|AAG22212.1| Rm62, isoform F [Drosophila melanogaster]
gi|23175947|gb|AAN14332.1| Rm62, isoform C [Drosophila melanogaster]
gi|25012758|gb|AAN71471.1| RE68337p [Drosophila melanogaster]
gi|45446365|gb|AAF51926.2| Rm62, isoform B [Drosophila melanogaster]
gi|220950572|gb|ACL87829.1| Rm62-PB [synthetic construct]
Length = 578
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Q + VD S + PF+K+FY E P +A +P EV++Y+E
Sbjct: 86 QDLPMRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYRE 125
>gi|157127270|ref|XP_001654897.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|157127276|ref|XP_001654900.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108872965|gb|EAT37190.1| AAEL010787-PA [Aedes aegypti]
gi|108872968|gb|EAT37193.1| AAEL010787-PD [Aedes aegypti]
Length = 594
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 115 SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ + K L K++ S ++ PF+KDFY E P I + +VE++ E
Sbjct: 60 TMESKPLQKINWSKMQLSPFKKDFYREHPAIKNRSQRDVERFLE 103
>gi|56201870|dbj|BAD73320.1| putative ethylene-responsive RNA helicase [Oryza sativa Japonica
Group]
Length = 521
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE P +A MT EEVE Y+
Sbjct: 51 FEKNFYVESPSVAGMTEEEVEAYR 74
>gi|24644481|ref|NP_731031.1| Rm62, isoform D [Drosophila melanogaster]
gi|281361218|ref|NP_001163528.1| Rm62, isoform H [Drosophila melanogaster]
gi|23175946|gb|AAN14331.1| Rm62, isoform D [Drosophila melanogaster]
gi|51092049|gb|AAT94438.1| RE56857p [Drosophila melanogaster]
gi|272476832|gb|ACZ94826.1| Rm62, isoform H [Drosophila melanogaster]
Length = 575
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Q + VD S + PF+K+FY E P +A +P EV++Y+E
Sbjct: 83 QDLPMRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYRE 122
>gi|24644483|ref|NP_731032.1| Rm62, isoform E [Drosophila melanogaster]
gi|320542448|ref|NP_001189182.1| Rm62, isoform I [Drosophila melanogaster]
gi|10727150|gb|AAF51927.2| Rm62, isoform E [Drosophila melanogaster]
gi|257286223|gb|ACV53058.1| LP18603p [Drosophila melanogaster]
gi|318068719|gb|ADV37273.1| Rm62, isoform I [Drosophila melanogaster]
Length = 578
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Q + VD S + PF+K+FY E P +A +P EV++Y+E
Sbjct: 86 QDLPMRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYRE 125
>gi|8444|emb|CAA37037.1| unnamed protein product [Drosophila melanogaster]
Length = 575
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Q + VD S + PF+K+FY E P +A +P EV++Y+E
Sbjct: 83 QDLPMRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYRE 122
>gi|157119649|ref|XP_001653435.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875244|gb|EAT39469.1| AAEL008738-PA [Aedes aegypti]
Length = 911
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYKE 158
PF KDFYV P + TPEEV+ ++E
Sbjct: 188 PFEKDFYVPHPNVMARTPEEVQAFRE 213
>gi|195343855|ref|XP_002038506.1| GM10578 [Drosophila sechellia]
gi|194133527|gb|EDW55043.1| GM10578 [Drosophila sechellia]
Length = 724
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Q + VD S + PF+K+FY E P +A +P EV++Y+E
Sbjct: 231 QDLPMRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYRE 270
>gi|403283252|ref|XP_003933040.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Saimiri
boliviensis boliviensis]
Length = 823
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 261 FEKNFYVEHPEVARLTPYEVDELR 284
>gi|428183429|gb|EKX52287.1| hypothetical protein GUITHDRAFT_161357 [Guillardia theta CCMP2712]
Length = 593
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
K++SK D + F+K+FY E P++A ++PEEV+ E
Sbjct: 76 KDISKEDWKKWDLPVFQKNFYKEHPQVAALSPEEVQSITE 115
>gi|24644479|ref|NP_524243.2| Rm62, isoform A [Drosophila melanogaster]
gi|30923187|sp|P19109.3|DDX17_DROME RecName: Full=ATP-dependent RNA helicase p62
gi|23175945|gb|AAG22213.2| Rm62, isoform A [Drosophila melanogaster]
gi|41058179|gb|AAR99134.1| RE11923p [Drosophila melanogaster]
Length = 719
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
Q + VD S + PF+K+FY E P +A +P EV++Y+E
Sbjct: 227 QDLPMRPVDFSNLA--PFKKNFYQEHPNVANRSPYEVQRYRE 266
>gi|281424916|ref|ZP_06255829.1| DEAD/DEAH box helicase [Prevotella oris F0302]
gi|281400760|gb|EFB31591.1| DEAD/DEAH box helicase [Prevotella oris F0302]
Length = 744
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 31 PLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGS---KPAGVVIVTGVVKKSVEKAKGEL 87
PLDA +Q RK K P + D+ K AGV+ T V K +E+ +G +
Sbjct: 533 PLDALLQRFGRVNRKREKGICPCYVFKERNDADKYIYKNAGVIERTLEVLKQIEQDEGGI 592
Query: 88 MEENQ----DGLEYS--SEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVE 141
++EN+ + Y SEEEQED + +K+L +++S F K F +
Sbjct: 593 IQENKLQALIDVVYPCWSEEEQEDFSMIKTLFEDYVEKDLRPLEYSAEREEEFYKQFDDK 652
Query: 142 VPEIARMTPE 151
A + PE
Sbjct: 653 KVIPAALVPE 662
>gi|294892441|ref|XP_002774065.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239879269|gb|EER05881.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 674
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 121 LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
L ++ + + RK+FYVE P +A MTPEEV++ +
Sbjct: 158 LIPINWQDTQLVELRKNFYVEDPRVAAMTPEEVDQVR 194
>gi|426227120|ref|XP_004007674.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Ovis aries]
Length = 774
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 173 FEKNFYVEHPEVARLTPYEVDELR 196
>gi|307191879|gb|EFN75298.1| Probable ATP-dependent RNA helicase DDX5 [Harpegnathos saltator]
Length = 627
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 43 MRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEE 102
M +N+ + P + + D G G + G+ + + +G ++ S
Sbjct: 1 MMHINEDSKPDMFN-RDRDQGRSRRGSAVRGGISRGGSDNGRGHIVSR-------FSTRG 52
Query: 103 QEDLTSTAANLASKQKKE-LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
+ +++ +L KQ L +V+ P RKDFYVE P + + EEV +++E
Sbjct: 53 RGSVSNVRGSLKGKQPGGGLRRVNWDLRSLEPLRKDFYVEHPAVRNRSKEEVSQFRE 109
>gi|194381202|dbj|BAG64169.1| unnamed protein product [Homo sapiens]
Length = 420
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 132 LP-FRKDFYVEVPEIARMTPEEVEKYKE 158
LP F K+FYVE PE+AR+TP EV++ +
Sbjct: 40 LPKFEKNFYVEHPEVARLTPYEVDELRR 67
>gi|157127274|ref|XP_001654899.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108872967|gb|EAT37192.1| AAEL010787-PB [Aedes aegypti]
Length = 434
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
K L K++ S ++ PF+KDFY E P I + +VE++ E
Sbjct: 64 KPLQKINWSKMQLSPFKKDFYREHPAIKNRSQRDVERFLE 103
>gi|255572963|ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 505
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYKE 158
PF K+FYVE P +A M+ EVE+Y++
Sbjct: 58 PFEKNFYVESPSVAAMSEREVEEYRQ 83
>gi|157127272|ref|XP_001654898.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108872966|gb|EAT37191.1| AAEL010787-PC [Aedes aegypti]
Length = 473
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 119 KELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKE 158
K L K++ S ++ PF+KDFY E P I + +VE++ E
Sbjct: 64 KPLQKINWSKMQLSPFKKDFYREHPAIKNRSQRDVERFLE 103
>gi|405118430|gb|AFR93204.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Cryptococcus
neoformans var. grubii H99]
Length = 1071
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 117 QKKELSKVDHSTIEYLPFRKDFYV 140
+KK+L DHS I+Y PFRK FYV
Sbjct: 344 RKKDLPPPDHSKIDYEPFRKAFYV 367
>gi|441617835|ref|XP_004088478.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 2
[Nomascus leucogenys]
Length = 420
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 132 LP-FRKDFYVEVPEIARMTPEEVEKYKE 158
LP F K+FYVE PE+AR+TP EV++ +
Sbjct: 40 LPKFEKNFYVEHPEVARLTPYEVDELRR 67
>gi|268569148|ref|XP_002640445.1| Hypothetical protein CBG08499 [Caenorhabditis briggsae]
Length = 203
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 87 LMEENQDGLEYSSEEEQEDLTSTA--ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
L+EE+Q+ LEY + +D+T A++ +KQ K+L KV T++Y RK E+
Sbjct: 96 LLEEDQNTLEYQIHQFLKDVTVYVWNAHVFTKQVKDLPKVYFITLDYFK-RKAESEEMKH 154
Query: 145 IARMTPEEVEKY 156
+ +M P ++ Y
Sbjct: 155 LVQMVPILLQTY 166
>gi|338721130|ref|XP_001916530.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Equus
caballus]
Length = 793
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 192 FEKNFYVEHPEVARLTPYEVDELR 215
>gi|156053343|ref|XP_001592598.1| hypothetical protein SS1G_06839 [Sclerotinia sclerotiorum 1980]
gi|160419162|sp|A7ENE0.1|PRP5_SCLS1 RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|154704617|gb|EDO04356.1| hypothetical protein SS1G_06839 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1114
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 26/39 (66%)
Query: 115 SKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
+++KK++ ++++ + PFRK+FY E E+ MT E+
Sbjct: 423 ARKKKDIPTINYANLNLPPFRKNFYTEPAELVDMTEAEI 461
>gi|195021550|ref|XP_001985416.1| GH17046 [Drosophila grimshawi]
gi|193898898|gb|EDV97764.1| GH17046 [Drosophila grimshawi]
Length = 811
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEK-A 83
+E D DPL+ FM G+++++ K A A + S S P V G + ++ +
Sbjct: 142 SESDEDPLEQFMAGINQQVEKEKVRA----ATEQQQKSSSAPLEKKGVRGDIDDEDDEES 197
Query: 84 KGELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFY 139
MEEN + GL + + D +A +KK+ L + HS IEY PF ++FY
Sbjct: 198 YYRYMEENPNAGLRDEGSDPEIDYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFERNFY 257
Query: 140 VEVPEIARMTPEEVEKYKEV 159
+IA++ ++V + +
Sbjct: 258 TPHEDIAQLDEDQVRELRRT 277
>gi|126339554|ref|XP_001367967.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Monodelphis domestica]
Length = 772
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 173 FEKNFYVEHPEVARLTPYEVDELR 196
>gi|328849200|gb|EGF98385.1| hypothetical protein MELLADRAFT_22529 [Melampsora larici-populina
98AG31]
Length = 815
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 15/132 (11%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKG 85
+EDIDPLDA+M V +E+ KVN A + + G K V ++ E+ +
Sbjct: 14 DEDIDPLDAYMSAVTDEVSKVNASDQQRMAQL---NQGRK---------VFEEDEEEEEE 61
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
E + + D +E + ED+ + AA +KK+L+ VDHS I+Y FRK FY E+
Sbjct: 62 EPVVASDDEIE-KTNLRPEDILALAA--KKLKKKDLAPVDHSKIDYESFRKAFYHPPAEV 118
Query: 146 ARMTPEEVEKYK 157
M+ EE E +
Sbjct: 119 EDMSEEEAENIR 130
>gi|66359622|ref|XP_626989.1| Prp5p C terminal KH. eIF4A-1-family RNA SFII helicase
[Cryptosporidium parvum Iowa II]
gi|46228440|gb|EAK89310.1| Prp5p C terminal KH. eIF4A-1-family RNA SFII helicase
[Cryptosporidium parvum Iowa II]
Length = 934
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 86 ELMEENQDGLEYSSEEEQED--------LTSTAANLASKQKKELSKVDHSTIEYLPFRKD 137
EL ++ D E ++ + + L+ L+ +KK + +++H I Y P K+
Sbjct: 111 ELSDQEDDHSEREDDQNESNSLGHMNPSLSKIEELLSLDKKKRIPEINHEVINYPPIIKN 170
Query: 138 FYVEVPEIARMTPEEVEKYKEVDN 161
+Y EV EI ++ EV+ + +N
Sbjct: 171 YYKEVNEIKKLKQHEVDHIRITNN 194
>gi|268569154|ref|XP_002640446.1| Hypothetical protein CBG08500 [Caenorhabditis briggsae]
Length = 214
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 87 LMEENQDGLEYSSEEEQEDLTSTA--ANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
L+EE+Q+ LEY + +D+T A++ +KQ K+L KV T++Y RK E+
Sbjct: 113 LLEEDQNTLEYQIHQFLKDVTVYVWNAHVFTKQVKDLPKVYFITLDYFK-RKAESEEMKH 171
Query: 145 IARMTPEEVEKY 156
+ +M P ++ Y
Sbjct: 172 LVQMVPILLQTY 183
>gi|358400668|gb|EHK49994.1| hypothetical protein TRIATDRAFT_161675, partial [Trichoderma
atroviride IMI 206040]
Length = 1258
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 34/131 (25%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGE 86
E+IDPL+AFM +++++ +P + K SV K K E
Sbjct: 504 EEIDPLEAFM----DDLKQTETTKIP----------------------LKKASVTKKKQE 537
Query: 87 ---LMEENQDGLEYSSEEEQEDLTSTAANLASKQKK-ELSKVDHSTIEYLPFRKDFYVEV 142
E+ +Y+ E++ + +ASK+KK ++ VD+S I+ P RK+F+VE
Sbjct: 538 PEAYFSED----DYAFEDQADPNADALLTIASKRKKKDIPSVDYSKIDLQPIRKNFWVEP 593
Query: 143 PEIARMTPEEV 153
E+ ++ +V
Sbjct: 594 AELNTLSEADV 604
>gi|343959846|dbj|BAK63780.1| probable ATP-dependent RNA helicase DDX17 [Pan troglodytes]
Length = 642
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 43 FEKNFYVEHPEVARLTPYEVDELR 66
>gi|119580646|gb|EAW60242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_b [Homo
sapiens]
Length = 418
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYKE 158
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELRR 75
>gi|74145393|dbj|BAE36146.1| unnamed protein product [Mus musculus]
Length = 418
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYKE 158
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELRR 75
>gi|410055921|ref|XP_003953938.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 1 [Pan
troglodytes]
Length = 642
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 43 FEKNFYVEHPEVARLTPYEVDELR 66
>gi|395538171|ref|XP_003771058.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Sarcophilus
harrisii]
Length = 699
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 100 FEKNFYVEHPEVARLTPYEVDELR 123
>gi|402226174|gb|EJU06234.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 734
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 124 VDHSTIEYLPFRKDFYVEVPEIARMTPEEV 153
VDH+ I Y FRK+FY E PEIA M E V
Sbjct: 71 VDHAKIAYESFRKEFYHEPPEIADMDEEGV 100
>gi|332231227|ref|XP_003264799.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 1
[Nomascus leucogenys]
Length = 644
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 43 FEKNFYVEHPEVARLTPYEVDELR 66
>gi|301757526|ref|XP_002914626.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17-like [Ailuropoda melanoleuca]
Length = 775
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 174 FEKNFYVEHPEVARLTPYEVDELR 197
>gi|335287568|ref|XP_003126098.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Sus
scrofa]
Length = 652
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|198282005|ref|NP_001095463.1| probable ATP-dependent RNA helicase DDX17 [Bos taurus]
gi|154757449|gb|AAI51649.1| DDX17 protein [Bos taurus]
gi|296487004|tpg|DAA29117.1| TPA: DEAD box polypeptide 17 [Bos taurus]
Length = 650
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|440903013|gb|ELR53727.1| Putative ATP-dependent RNA helicase DDX17, partial [Bos grunniens
mutus]
Length = 731
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 130 FEKNFYVEHPEVARLTPYEVDELR 153
>gi|52545677|emb|CAH10627.2| hypothetical protein [Homo sapiens]
Length = 652
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|355784988|gb|EHH65839.1| hypothetical protein EGM_02689, partial [Macaca fascicularis]
Length = 731
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 130 FEKNFYVEHPEVARLTPYEVDELR 153
>gi|395819770|ref|XP_003783252.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Otolemur
garnettii]
Length = 652
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|147784285|emb|CAN70592.1| hypothetical protein VITISV_026736 [Vitis vinifera]
Length = 115
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 133 PFRKDFYVEVPEIARMTPEEVEKYKE 158
PF K+FYVE P +A M+ +EVE+Y+E
Sbjct: 59 PFEKNFYVESPAVAAMSEKEVEQYRE 84
>gi|32880087|gb|AAP88874.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 17, 72kDa [synthetic
construct]
gi|61372130|gb|AAX43789.1| DEAD box polypeptide 17 [synthetic construct]
gi|61372139|gb|AAX43790.1| DEAD box polypeptide 17 [synthetic construct]
Length = 651
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|355683242|gb|AER97060.1| DEAD box polypeptide 17 [Mustela putorius furo]
Length = 730
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 132 FEKNFYVEHPEVARLTPYEVDELR 155
>gi|351699283|gb|EHB02202.1| Putative ATP-dependent RNA helicase DDX17 [Heterocephalus glaber]
Length = 650
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|345777025|ref|XP_860668.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 11
[Canis lupus familiaris]
gi|431905181|gb|ELK10228.1| Putative ATP-dependent RNA helicase DDX17 [Pteropus alecto]
Length = 652
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|444717657|gb|ELW58482.1| putative ATP-dependent RNA helicase DDX17 [Tupaia chinensis]
Length = 653
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 52 FEKNFYVEHPEVARLTPYEVDELR 75
>gi|348569510|ref|XP_003470541.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Cavia
porcellus]
Length = 407
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYKE 158
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELRR 75
>gi|410965551|ref|XP_004001562.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17 [Felis catus]
Length = 650
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|40068491|ref|NP_951061.1| probable ATP-dependent RNA helicase DDX17 isoform 2 [Mus musculus]
gi|354505333|ref|XP_003514725.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Cricetulus
griseus]
gi|26333513|dbj|BAC30474.1| unnamed protein product [Mus musculus]
gi|148672699|gb|EDL04646.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_b [Mus
musculus]
Length = 407
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYKE 158
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELRR 75
>gi|242051719|ref|XP_002455005.1| hypothetical protein SORBIDRAFT_03g002860 [Sorghum bicolor]
gi|241926980|gb|EES00125.1| hypothetical protein SORBIDRAFT_03g002860 [Sorghum bicolor]
Length = 488
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE P +A MT EEVE Y+
Sbjct: 51 FEKNFYVESPSVAGMTEEEVEAYR 74
>gi|297261056|ref|XP_001092491.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Macaca
mulatta]
gi|297708870|ref|XP_002831174.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Pongo abelii]
gi|1592565|gb|AAC50787.1| DEAD-box protein p72 [Homo sapiens]
gi|119580650|gb|EAW60246.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_f [Homo
sapiens]
Length = 650
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|390458842|ref|XP_002743821.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Callithrix
jacchus]
Length = 652
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|387542724|gb|AFJ71989.1| putative ATP-dependent RNA helicase DDX17 isoform 3 [Macaca
mulatta]
Length = 731
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 130 FEKNFYVEHPEVARLTPYEVDELR 153
>gi|387540018|gb|AFJ70636.1| putative ATP-dependent RNA helicase DDX17 isoform 1 [Macaca
mulatta]
Length = 729
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 130 FEKNFYVEHPEVARLTPYEVDELR 153
>gi|291389880|ref|XP_002711450.1| PREDICTED: DEAD box polypeptide 17 [Oryctolagus cuniculus]
Length = 835
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 234 FEKNFYVEHPEVARLTPYEVDELR 257
>gi|148613856|ref|NP_001091974.1| probable ATP-dependent RNA helicase DDX17 isoform 3 [Homo sapiens]
Length = 731
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 130 FEKNFYVEHPEVARLTPYEVDELR 153
>gi|397501955|ref|XP_003821639.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Pan paniscus]
gi|402884232|ref|XP_003905591.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Papio anubis]
gi|410055919|ref|XP_525595.4| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 2 [Pan
troglodytes]
gi|426394473|ref|XP_004063520.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Gorilla
gorilla gorilla]
gi|47678395|emb|CAG30318.1| DDX17 [Homo sapiens]
gi|109451124|emb|CAK54423.1| DDX17 [synthetic construct]
gi|109451702|emb|CAK54722.1| DDX17 [synthetic construct]
gi|119580647|gb|EAW60243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_c [Homo
sapiens]
gi|208967743|dbj|BAG72517.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [synthetic construct]
Length = 652
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|38201710|ref|NP_006377.2| probable ATP-dependent RNA helicase DDX17 isoform 1 [Homo sapiens]
gi|380865374|sp|Q92841.2|DDX17_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX17; AltName:
Full=DEAD box protein 17; AltName: Full=DEAD box protein
p72; AltName: Full=RNA-dependent helicase p72
gi|110611789|gb|AAH00595.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Homo sapiens]
Length = 729
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 130 FEKNFYVEHPEVARLTPYEVDELR 153
>gi|93587673|ref|NP_001035277.1| probable ATP-dependent RNA helicase DDX17 isoform 4 [Mus musculus]
gi|76364169|sp|Q501J6.1|DDX17_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX17; AltName:
Full=DEAD box protein 17
gi|63146347|gb|AAH96036.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Mus musculus]
Length = 650
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|40068493|ref|NP_951062.1| probable ATP-dependent RNA helicase DDX17 isoform 1 [Mus musculus]
gi|74181626|dbj|BAE30078.1| unnamed protein product [Mus musculus]
gi|74220643|dbj|BAE31531.1| unnamed protein product [Mus musculus]
gi|148672698|gb|EDL04645.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_a [Mus
musculus]
Length = 652
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|355563672|gb|EHH20234.1| hypothetical protein EGK_03044 [Macaca mulatta]
Length = 800
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 219 FEKNFYVEHPEVARLTPYEVDELR 242
>gi|154757438|gb|AAI51769.1| DDX17 protein [Bos taurus]
Length = 341
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYKE 158
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELRR 75
>gi|149065924|gb|EDM15797.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_a [Rattus
norvegicus]
gi|344257977|gb|EGW14081.1| putative ATP-dependent RNA helicase DDX17 [Cricetulus griseus]
Length = 652
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELR 74
>gi|38566035|gb|AAH62910.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Mus musculus]
Length = 407
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYKE 158
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELRR 75
>gi|143361556|sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 20
Length = 494
Score = 35.4 bits (80), Expect = 8.9, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE P +A MT EEVE Y+
Sbjct: 51 FEKNFYVESPSVAGMTEEEVEAYR 74
>gi|317030312|ref|XP_001392304.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Aspergillus
niger CBS 513.88]
gi|143359932|sp|A2QQA8.2|PRP5_ASPNC RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
Length = 1180
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
++ VDH +EY FRK FY E ++A+M+ EE +
Sbjct: 492 DIPAVDHKKVEYETFRKKFYTEPSDLAQMSDEEAASLR 529
>gi|134076811|emb|CAK39865.1| unnamed protein product [Aspergillus niger]
Length = 1191
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
++ VDH +EY FRK FY E ++A+M+ EE +
Sbjct: 503 DIPAVDHKKVEYETFRKKFYTEPSDLAQMSDEEAASLR 540
>gi|67971318|dbj|BAE02001.1| unnamed protein product [Macaca fascicularis]
Length = 304
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYKE 158
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELRR 75
>gi|62088770|dbj|BAD92832.1| DEAD box polypeptide 17 isoform p82 variant [Homo sapiens]
Length = 737
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYK 157
F K+FYVE PE+AR+TP EV++ +
Sbjct: 132 FEKNFYVEHPEVARLTPYEVDELR 155
>gi|358372963|dbj|GAA89564.1| pre-mRNA-processing ATP-dependent RNA helicase Prp5 [Aspergillus
kawachii IFO 4308]
Length = 1178
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
++ VDH +EY FRK FY E ++A+M+ EE +
Sbjct: 490 DIPTVDHKKVEYESFRKKFYTEPSDLAQMSDEEAASLR 527
>gi|350629482|gb|EHA17855.1| hypothetical protein ASPNIDRAFT_55865 [Aspergillus niger ATCC 1015]
Length = 1198
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
++ VDH +EY FRK FY E ++A+M+ EE +
Sbjct: 510 DIPAVDHKKVEYETFRKKFYTEPSDLAQMSDEEAASLR 547
>gi|195127173|ref|XP_002008043.1| GI12051 [Drosophila mojavensis]
gi|193919652|gb|EDW18519.1| GI12051 [Drosophila mojavensis]
Length = 797
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 26/148 (17%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAK 84
++ D DPL+ FM G+ +++ K V+ D P V + KK V
Sbjct: 126 SDSDEDPLEQFMAGIKQQVEK---------EKVRATD----PQQKTNVAPLEKKGVRGDI 172
Query: 85 G---------ELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEY 131
MEEN + G+ +++ D +A +KK+ L + HS IEY
Sbjct: 173 DDEDDEESYYRYMEENPNAGMRDEGSDQEIDYDEDGNPIAPPKKKDIDPLPPIYHSEIEY 232
Query: 132 LPFRKDFYVEVPEIARMTPEEVEKYKEV 159
PF ++FY +IA++ E+V + +
Sbjct: 233 EPFERNFYTPHEDIAQLNEEQVRELRHT 260
>gi|193573502|ref|XP_001943796.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Acyrthosiphon
pisum]
Length = 737
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 31 PLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAGVVIVTGVVKKSVEKAKGELMEE 90
PLDAFM+G+ +E++K + + I + ++ +E++ MEE
Sbjct: 105 PLDAFMEGLEKEVKKAKTSGKKEKKEDEKG----------IRQDIEEEDIEESYYRYMEE 154
Query: 91 N-QDGLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFYVEVPEIA 146
N GL + + + D +A +KKE L +DHS I+Y F K+FY EI+
Sbjct: 155 NPTAGLVDETSDIEIDYDEDGNPIAPPKKKEIDPLPPIDHSLIKYKSFEKNFYTPHNEIS 214
Query: 147 RMTPEEVEKYKE 158
+T ++V + ++
Sbjct: 215 SLTVDKVIQLRK 226
>gi|218187683|gb|EEC70110.1| hypothetical protein OsI_00766 [Oryza sativa Indica Group]
Length = 470
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 132 LP-FRKDFYVEVPEIARMTPEEVEKYKE 158
LP F K+FYVE P +A MT EEVE Y+
Sbjct: 50 LPRFEKNFYVESPSVAGMTEEEVEAYRR 77
>gi|443895251|dbj|GAC72597.1| RNA helicase [Pseudozyma antarctica T-34]
Length = 1151
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 120 ELSKVDHSTIEYLPFRKDFYVEVPEIARMTPE 151
EL+ VDHS ++Y PFRK FY EI M+ E
Sbjct: 422 ELAIVDHSAVDYEPFRKVFYHPPAEIDDMSEE 453
>gi|226506900|ref|NP_001142117.1| uncharacterized protein LOC100274281 [Zea mays]
gi|194704910|gb|ACF86539.1| unknown [Zea mays]
gi|194707190|gb|ACF87679.1| unknown [Zea mays]
gi|414875847|tpg|DAA52978.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 494
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 132 LP-FRKDFYVEVPEIARMTPEEVEKYKE 158
LP F K+FYVE P +A MT EEVE Y+
Sbjct: 48 LPRFEKNFYVESPAVAGMTEEEVEAYRR 75
>gi|119580649|gb|EAW60245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_e [Homo
sapiens]
Length = 334
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 134 FRKDFYVEVPEIARMTPEEVEKYKE 158
F K+FYVE PE+AR+TP EV++ +
Sbjct: 51 FEKNFYVEHPEVARLTPYEVDELRR 75
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.302 0.124 0.332
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,658,981,991
Number of Sequences: 23463169
Number of extensions: 112464436
Number of successful extensions: 682041
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 1263
Number of HSP's that attempted gapping in prelim test: 674369
Number of HSP's gapped (non-prelim): 6244
length of query: 161
length of database: 8,064,228,071
effective HSP length: 123
effective length of query: 38
effective length of database: 9,473,225,580
effective search space: 359982572040
effective search space used: 359982572040
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 71 (32.0 bits)