Your job contains 1 sequence.
>psy12411
MKKWNLEDDSDEDENDNKDENGKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA
DSGSKPAGVVIVTGVVKKSVEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKE
LSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYKEVDN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12411
(161 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030631 - symbol:CG6227 species:7227 "Drosophila m... 315 7.4e-27 1
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 300 2.3e-25 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 292 1.6e-24 1
UNIPROTKB|D6RJA6 - symbol:DDX46 "Probable ATP-dependent R... 278 7.2e-24 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 284 1.2e-23 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 284 1.2e-23 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 284 1.2e-23 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 279 3.9e-23 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 278 5.0e-23 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 278 5.0e-23 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 276 8.2e-23 1
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 191 1.2e-13 1
TAIR|locus:2074899 - symbol:AT3G09620 species:3702 "Arabi... 170 1.6e-11 1
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 139 4.1e-10 2
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 148 2.6e-09 1
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 120 4.5e-09 2
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 124 5.1e-09 2
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 108 3.6e-08 2
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 129 3.8e-07 1
DICTYBASE|DDB_G0275443 - symbol:helB1 "putative RNA splic... 129 4.6e-07 1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 125 9.3e-07 1
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 124 1.0e-06 1
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 123 1.1e-06 1
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 123 1.6e-06 1
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 123 1.6e-06 1
SGD|S000000441 - symbol:PRP5 "RNA helicase in the DEAD-bo... 99 3.5e-06 2
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 115 1.1e-05 1
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 115 1.1e-05 1
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 114 1.4e-05 1
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 114 1.4e-05 1
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 114 1.4e-05 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 114 1.5e-05 1
CGD|CAL0005725 - symbol:PRP5 species:5476 "Candida albica... 112 2.2e-05 1
UNIPROTKB|Q5ADL0 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 112 2.2e-05 1
GENEDB_PFALCIPARUM|PFE0430w - symbol:PFE0430w "ATP-depend... 107 0.00014 1
UNIPROTKB|Q8I416 - symbol:PFE0430w "ATP-dependent RNA Hel... 107 0.00014 1
WB|WBGene00008119 - symbol:C46F11.4 species:6239 "Caenorh... 104 0.00014 1
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 315 (115.9 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 66/132 (50%), Positives = 85/132 (64%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAKG 85
E++IDPLDA+MQ V+ EMR+VN P PA S KG
Sbjct: 370 EDEIDPLDAYMQEVNNEMRRVNNFVNP------PAKS---QGVVILTGVAKKKTTTLKKG 420
Query: 86 ELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEI 145
E++E+N D LEYSSE+E ED+ TA NLA K +KEL+K+DHS++ Y PFRK+FYVEVPE+
Sbjct: 421 EVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPEL 480
Query: 146 ARMTPEEVEKYK 157
RMT +VEKY+
Sbjct: 481 TRMTAADVEKYR 492
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 300 (110.7 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 62/131 (47%), Positives = 82/131 (62%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAKGE 86
E++DPLDA+M+ V EE++K N + D K S +K K KGE
Sbjct: 211 EEVDPLDAYMEEVKEEVKKFNMGTMKGANDKKGGMSVTKVVTVVKTKKMPHAT--KKKGE 268
Query: 87 LMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIA 146
LME +QD +EYSSEEE+ DL + +KQ+K L VDH I+Y PFRK+FYVEVPE+A
Sbjct: 269 LMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFRKNFYVEVPELA 328
Query: 147 RMTPEEVEKYK 157
RM+PEEV +Y+
Sbjct: 329 RMSPEEVSEYR 339
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 292 (107.8 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 62/134 (46%), Positives = 84/134 (62%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTT--ADVKPADSGSKPAXXXXXXXXXXXXXEKA 83
+E++DPLDA+M+ V EE++K N +V ++ K + +K EK
Sbjct: 221 DEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSEKKSGPTVTK-VVTVVTTKKAVVETEKK 279
Query: 84 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVP
Sbjct: 280 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 339
Query: 144 EIARMTPEEVEKYK 157
E+A+MT EEV Y+
Sbjct: 340 ELAKMTQEEVNVYR 353
>UNIPROTKB|D6RJA6 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0005730
EMBL:CH471062 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:Hs.406549 HGNC:HGNC:18681 ChiTaRS:DDX46 EMBL:AC006077
EMBL:AC010301 IPI:IPI00967303 SMR:D6RJA6 Ensembl:ENST00000507392
Uniprot:D6RJA6
Length = 471
Score = 278 (102.9 bits), Expect = 7.2e-24, P = 7.2e-24
Identities = 59/133 (44%), Positives = 82/133 (61%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 84
E++DPLDA+M+ V EE++K N +V + K + +K +K K
Sbjct: 175 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 233
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVPE
Sbjct: 234 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 293
Query: 145 IARMTPEEVEKYK 157
+A+M+ EEV ++
Sbjct: 294 LAKMSQEEVNVFR 306
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 60/134 (44%), Positives = 84/134 (62%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKA 83
+E++DPLDA+M+ V EE++K N +V A + K + +K +K
Sbjct: 222 DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTK-VVTVVTTKKAVVDADKK 280
Query: 84 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVP
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 340
Query: 144 EIARMTPEEVEKYK 157
E+A+M+ EEV ++
Sbjct: 341 ELAKMSQEEVNVFR 354
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 60/134 (44%), Positives = 84/134 (62%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKA 83
+E++DPLDA+M+ V EE++K N +V A + K + +K +K
Sbjct: 222 DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTK-VVTVVTTKKAVVDADKK 280
Query: 84 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVP
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 340
Query: 144 EIARMTPEEVEKYK 157
E+A+M+ EEV ++
Sbjct: 341 ELAKMSQEEVNVFR 354
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 60/134 (44%), Positives = 84/134 (62%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKA 83
+E++DPLDA+M+ V EE++K N +V A + K + +K +K
Sbjct: 222 DEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTK-VVTVVTTKKAVVDADKK 280
Query: 84 KGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVP 143
KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVP
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVP 340
Query: 144 EIARMTPEEVEKYK 157
E+A+M+ EEV ++
Sbjct: 341 ELAKMSQEEVNVFR 354
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 279 (103.3 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 61/139 (43%), Positives = 84/139 (60%)
Query: 22 GKTAE-EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXX 78
G E E++DPLDA+M+ V EE++K N +V + K + +K
Sbjct: 217 GNEVEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVV 275
Query: 79 XXEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDF 138
+K KGELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+F
Sbjct: 276 DSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNF 335
Query: 139 YVEVPEIARMTPEEVEKYK 157
YVEVPE+A+M+ EEV ++
Sbjct: 336 YVEVPELAKMSQEEVNVFR 354
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 278 (102.9 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 59/133 (44%), Positives = 82/133 (61%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 84
E++DPLDA+M+ V EE++K N +V + K + +K +K K
Sbjct: 223 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 281
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVPE
Sbjct: 282 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 341
Query: 145 IARMTPEEVEKYK 157
+A+M+ EEV ++
Sbjct: 342 LAKMSQEEVNVFR 354
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 278 (102.9 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 59/133 (44%), Positives = 82/133 (61%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 84
E++DPLDA+M+ V EE++K N +V + K + +K +K K
Sbjct: 223 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 281
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVPE
Sbjct: 282 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 341
Query: 145 IARMTPEEVEKYK 157
+A+M+ EEV ++
Sbjct: 342 LAKMSQEEVNVFR 354
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 276 (102.2 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 59/133 (44%), Positives = 82/133 (61%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTA--DVKPADSGSKPAXXXXXXXXXXXXXEKAK 84
E++DPLDA+M+ V EE++K N +V + K + +K +K K
Sbjct: 223 EELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTK-VVTVVTTKKAVVDSDKKK 281
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPE 144
GELME +QD +EYSSEEE+ DL + +KQ+K L VDH IEY PFRK+FYVEVPE
Sbjct: 282 GELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPE 341
Query: 145 IARMTPEEVEKYK 157
+A+M+ EEV ++
Sbjct: 342 LAKMSLEEVNVFR 354
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 191 (72.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 57/148 (38%), Positives = 75/148 (50%)
Query: 22 GKTAEEDIDPLDAFMQG-VHEEMRKVNKPAVPT-----TADVKP--ADSGSKPAXXXXXX 73
G EE+IDPLDAFM V E+ K A P T D K +SG +P
Sbjct: 373 GAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRPKKGFNKA 432
Query: 74 XXXXXXXEKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLP 133
E + + E D + S +E+ E+ +K +K LS VDHS IEY P
Sbjct: 433 LGRIIQGEDSDSDYSEPKNDD-DPSLDEDDEEFMKRVKK--TKAEK-LSLVDHSKIEYEP 488
Query: 134 FRKDFYVEVPEIARMTPEEVEKY-KEVD 160
FRK+FY+EV +I+RMT EEV Y KE++
Sbjct: 489 FRKNFYIEVKDISRMTQEEVNTYRKELE 516
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 170 (64.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 49/144 (34%), Positives = 74/144 (51%)
Query: 23 KTAEED-IDPLDAFMQG-VHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 80
+ A+ED IDPLDAFM V E+ K++ + D K +G +
Sbjct: 244 RAADEDEIDPLDAFMNTMVLPEVEKLSNIVIDGILDFKM--NGKETGDQAKKGFNKAALG 301
Query: 81 EKAKGELMEENQDGLEYSSEEE---QEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKD 137
+GE + + D E S+++ ED + + ++LS VDHS IEY PFRK+
Sbjct: 302 RIIQGE--DSDSDYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKN 359
Query: 138 FYVEVPEIARMTPEEVEKY-KEVD 160
FY+EV +I+RMT + V Y KE++
Sbjct: 360 FYIEVKDISRMTQDAVNAYRKELE 383
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 139 (54.0 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
E KG+++E N+D ++ ++ D+ + AA+L K + L++ DHS + Y F+K+FY+
Sbjct: 214 EPEKGQVLE-NEDNMDMVIDDF--DIETAAASLCHKGRM-LAQTDHSKVYYRKFKKNFYI 269
Query: 141 EVPEIARMTPEEVEKYKE 158
E EI RMT EV+ Y+E
Sbjct: 270 ETEEIRRMTKAEVKAYRE 287
Score = 43 (20.2 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 26 EEDIDPLDAFMQGV 39
+++ DPLDAFM+ +
Sbjct: 173 DDEEDPLDAFMKEI 186
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 148 (57.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 41/138 (29%), Positives = 64/138 (46%)
Query: 27 EDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAKGE 86
++IDPLDAFM+G+H+EM+ P P + D P A
Sbjct: 76 DEIDPLDAFMEGIHQEMKSAPPPK-PKEKLERYKDDDDDPVESYLKAKKDLGLTLAADAL 134
Query: 87 LMEENQDGLEYSSEEEQE----DLTSTAANLA-SKQKKE-LSKVDHSTIEYLPFRKDFYV 140
N D Y++ + + D S + K+K E ++ +DHS+I+Y P KDFY
Sbjct: 135 NAGYNSDEEVYAAAKAVDAGMLDYDSDDNPIVVDKRKIEPITALDHSSIDYEPINKDFYE 194
Query: 141 EVPEIARMTPEEVEKYKE 158
E+ I+ MT +E Y++
Sbjct: 195 ELESISGMTEQETTDYRQ 212
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 120 (47.3 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 89 EENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
+E+ + E + ED + A+ +K+KK++ VDH+ +EY PFR+ FY E ++A+M
Sbjct: 457 DEHDVSMTAVGEGDAEDFLAIASK--AKKKKDIPTVDHNKVEYEPFRRKFYTEPSDLAQM 514
Query: 149 TPEEVEKYK-EVD 160
+ EE + E+D
Sbjct: 515 SEEEAANLRLELD 527
Score = 54 (24.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 26 EEDIDPLDAFMQGVHE 41
EE++DPLDAFM + E
Sbjct: 418 EEELDPLDAFMSELAE 433
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 37 QGVHEEMRKVNKPAVPT----TADVKPADSGSK 65
+G + R+ + PA+PT T D K A+ +K
Sbjct: 146 RGAEPKSREASTPAIPTRTGPTDDEKRAERLAK 178
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 124 (48.7 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 91 NQDGLEYSSE--EEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARM 148
N D SE EE+E+L + AA SK KK++ VDHS I Y F+KDFYVE E+ +
Sbjct: 334 NDDERMVISETLEEEENLLALAAK-RSK-KKDVITVDHSKINYEDFKKDFYVEPEELKNL 391
Query: 149 TPEEVEKYK 157
+P EV++ +
Sbjct: 392 SPAEVDELR 400
Score = 48 (22.0 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKP 59
E+++DPLDA+M + + +P + T + P
Sbjct: 299 EDEVDPLDAYMASLVGTTDTI-RPGLLNTEVIDP 331
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 108 (43.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 98 SSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYVEVPEIARMTPEEVEKYK 157
+S +E D + A A ++KKE+ +D+S ++ +P RK+F+VE E++ MT EV + +
Sbjct: 301 ASTKEGVDAKAIMAMAAKRKKKEIPTIDYSKLDIVPVRKNFWVEPYELSEMTEAEVAELR 360
Query: 158 -EVD 160
E+D
Sbjct: 361 LELD 364
Score = 56 (24.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 23 KTAEEDIDPLDAFMQGVHE-EMRKVNKPAVPTTADVK 58
K ++++DPLDAFM + E +KP V T + K
Sbjct: 249 KEDDDEVDPLDAFMADLTEPSFGPASKP-VKTLSSAK 284
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 129 (50.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPA-DSGSKPAXXXXXXXXXXXXXEK-- 82
+++IDPLDAFM+ V+ + N ++ + + S +K
Sbjct: 148 DDEIDPLDAFMENVNAQAAIDNSKSIEKGQQQQQSLKSKRDDIDNEDDEEIFYKLRQKQL 207
Query: 83 AKGELMEENQDGLEYSSEEEQE---DLTSTAANLASKQKK---ELSKVDHSTIEYLPFRK 136
A ++ D ++YSS ++ + D + N SK K+ L +DHS EY+ F K
Sbjct: 208 ANKSSKQQQDDDVDYSSLDDDDGYFDDEESLKNGQSKGKRIIEPLPPIDHSKEEYIEFNK 267
Query: 137 DFYVEVPEIARMTPEEV-EKYKEVD 160
FY E P+IA +T E+V E K +D
Sbjct: 268 IFYEEHPDIANLTEEQVFEIRKNLD 292
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 129 (50.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
+K+K M ++ + LE SE E + T K KKE+ DH++I+Y F+K+FY+
Sbjct: 420 KKSKTSQMIDDDEKLEEESEGEDDGKDKTI----KKGKKEMLHTDHTSIKYAEFQKNFYI 475
Query: 141 EVPEIARMTPEEVEKYK 157
EVP +A MT EV ++
Sbjct: 476 EVPVLANMTETEVLDFR 492
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 125 (49.1 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 47/136 (34%), Positives = 61/136 (44%)
Query: 22 GKTAEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXE 81
G + ED DPLDAFM V ++ K + V D S S+ +
Sbjct: 108 GGSDSED-DPLDAFMAEVEDQAAK-DDGQVRVCHDYISI-SFSR----GIRDDIEEEDDQ 160
Query: 82 KAKGELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 137
+A M EN GL EEE+ D S +A KK L +DHS I+Y PF K+
Sbjct: 161 EAYFRYMAENPTAGLTQEEEEEEVDYDSDGNPIAPTTKKIIMPLPPIDHSEIDYSPFEKN 220
Query: 138 FYVEVPEIARMTPEEV 153
FY E EI+ +T EV
Sbjct: 221 FYNEHEEISSLTGAEV 236
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 124 (48.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 35/137 (25%), Positives = 63/137 (45%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAK 84
++ D DPL+ FM G+++++ K + P KP E++
Sbjct: 128 SDSDEDPLEQFMAGINQQVEKEKRQQAP------------KPPTQAVRGDIDDEDDEESY 175
Query: 85 GELMEENQD-GLEYSSEEEQEDLTSTAANLASKQKKE---LSKVDHSTIEYLPFRKDFYV 140
M+EN + GL +++ + +A +KK+ L + HS IEY PF K+FY
Sbjct: 176 YRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFEKNFYT 235
Query: 141 EVPEIARMTPEEVEKYK 157
+ +IA + E+V + +
Sbjct: 236 QHDDIAALDDEQVRELR 252
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/134 (29%), Positives = 56/134 (41%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADS--GSKPAXXXXXXXXXXXXXEK 82
++ D DPL+AFM V ++ + K + K A
Sbjct: 104 SDSDDDPLEAFMAEVEDQAARDMKRLEDKDKEKKNAKGIRDDIEEEDDQEAYFRYMAENP 163
Query: 83 AKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFY 139
G + EE +D LEY S+ N + KK L +DHS IEY PF K+FY
Sbjct: 164 TAGVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFY 213
Query: 140 VEVPEIARMTPEEV 153
E EI +TP++V
Sbjct: 214 DEHEEITSLTPQQV 227
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 123 (48.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/134 (29%), Positives = 56/134 (41%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADS--GSKPAXXXXXXXXXXXXXEK 82
++ D DPL+AFM V ++ + K + K A
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEDKDKEKKNAKGIRDDIEEEDDQEAYFRYMAENP 168
Query: 83 AKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFY 139
G + EE +D LEY S+ N + KK L +DHS IEY PF K+FY
Sbjct: 169 TAGVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFY 218
Query: 140 VEVPEIARMTPEEV 153
E EI +TP++V
Sbjct: 219 DEHEEITSLTPQQV 232
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 123 (48.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 42/132 (31%), Positives = 58/132 (43%)
Query: 25 AEEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXXEKAK 84
++ D DPL+AFM E + N A ++ D K A E A
Sbjct: 109 SDSDDDPLEAFMA---ESVE--NDQAARDMKRLEDKDKEKKNAKGIRDDIEEEDDQE-AY 162
Query: 85 GELMEENQD-GLEYSSEEEQEDLTSTAANLASKQK--KELSKVDHSTIEYLPFRKDFYVE 141
M EN G+ EE+ + S +A +K L +DHS IEY PF K+FY E
Sbjct: 163 FRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDE 222
Query: 142 VPEIARMTPEEV 153
EI +TP++V
Sbjct: 223 HEEITSLTPQQV 234
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 99 (39.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 84 KGELMEENQDGLEY--SSEEEQEDLT--STAANLAS-KQKKELSKVDHSTIEYLPFRKDF 138
+G++++ E + +E+ ED T S A +A K KK + ++ +S E PF+K+F
Sbjct: 159 RGDILDVEDQLFELGGTDDEDVEDNTDNSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNF 218
Query: 139 YVEVPEIARMTPEEVEKYK-EVDN 161
Y+E ++ M+ EVE+ + +DN
Sbjct: 219 YIESETVSSMSEMEVEELRLSLDN 242
Score = 44 (20.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNK 48
+ + DPLD FM + EE +K
Sbjct: 132 DNEKDPLDEFMTSLKEEKMSNSK 154
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 115 (45.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/133 (28%), Positives = 60/133 (45%)
Query: 25 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 80
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
A G + EE +D LEY S+ + T K L +DHS I+Y PF K+FY
Sbjct: 168 PTA-GVVQEEEEDNLEYDSDGNP--IAPT-----KKIIDPLPPIDHSEIDYPPFEKNFYN 219
Query: 141 EVPEIARMTPEEV 153
E EI +TP+++
Sbjct: 220 EHEEITNLTPQQL 232
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 115 (45.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/133 (28%), Positives = 60/133 (45%)
Query: 25 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 80
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQETYFRYMAEN 167
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
A G + EE +D LEY S+ + T K L +DHS I+Y PF K+FY
Sbjct: 168 PTA-GVVQEEEEDNLEYDSDGNP--IAPT-----KKIIDPLPPIDHSEIDYPPFEKNFYN 219
Query: 141 EVPEIARMTPEEV 153
E EI +TP+++
Sbjct: 220 EHEEITNLTPQQL 232
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 25 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 80
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 137
A G + EE +D LEY S+ N + KK L +DHS I+Y PF K+
Sbjct: 168 PTA-GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKN 216
Query: 138 FYVEVPEIARMTPEEV 153
FY E EI +TP+++
Sbjct: 217 FYNEHEEITNLTPQQL 232
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 25 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 80
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 137
A G + EE +D LEY S+ N + KK L +DHS I+Y PF K+
Sbjct: 168 PTA-GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKN 216
Query: 138 FYVEVPEIARMTPEEV 153
FY E EI +TP+++
Sbjct: 217 FYNEHEEITNLTPQQL 232
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 25 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 80
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 137
A G + EE +D LEY S+ N + KK L +DHS I+Y PF K+
Sbjct: 168 PTA-GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKN 216
Query: 138 FYVEVPEIARMTPEEV 153
FY E EI +TP+++
Sbjct: 217 FYNEHEEITNLTPQQL 232
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 25 AEEDIDPLDAFMQGVHEE----MRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX 80
++ D DPL+AFM V ++ M+++ + +VK +
Sbjct: 109 SDSDDDPLEAFMAEVEDQAARDMKRLEEKD-KERKNVKGIRDDIEEEDDQEAYFRYMAEN 167
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKD 137
A G + EE +D LEY S+ N + KK L +DHS I+Y PF K+
Sbjct: 168 PTA-GVVQEEEEDNLEYDSD----------GNPIAPSKKIIDPLPPIDHSEIDYPPFEKN 216
Query: 138 FYVEVPEIARMTPEEV 153
FY E EI +TP+++
Sbjct: 217 FYNEHEEITNLTPQQL 232
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 112 (44.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
EK + + + E E +DL ST + KEL +DHS Y FRK FY
Sbjct: 199 EKENDDYGGDGDEEDESDEESRLQDLISTKLTKLQNKGKELQSIDHSQENYQEFRKVFYR 258
Query: 141 EVPEIARMTPEEVEKYKE-VDN 161
E E++ ++ E+VE ++ +DN
Sbjct: 259 EAYELSALSDEQVELIRQDLDN 280
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 112 (44.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 81 EKAKGELMEENQDGLEYSSEEEQEDLTSTAANLASKQKKELSKVDHSTIEYLPFRKDFYV 140
EK + + + E E +DL ST + KEL +DHS Y FRK FY
Sbjct: 199 EKENDDYGGDGDEEDESDEESRLQDLISTKLTKLQNKGKELQSIDHSQENYQEFRKVFYR 258
Query: 141 EVPEIARMTPEEVEKYKE-VDN 161
E E++ ++ E+VE ++ +DN
Sbjct: 259 EAYELSALSDEQVELIRQDLDN 280
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
Identities = 23/82 (28%), Positives = 44/82 (53%)
Query: 83 AKGELMEENQDGLEYSSEEEQEDLTSTAANL------ASKQKKELSKVDHSTIEYLPFRK 136
+K + + D SS++ + L+S + L K K+L +V+H I+Y+P +K
Sbjct: 625 SKNKKQNKGSDASFSSSDDTDDKLSSNKSELNYEENGMKKMNKKLLEVNHDEIDYIPIKK 684
Query: 137 DFYVEVPEIARMTPEEVEKYKE 158
+ YV+V EI M +V+ +++
Sbjct: 685 NIYVQVKEITNMKDSDVDMFRK 706
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
Identities = 23/82 (28%), Positives = 44/82 (53%)
Query: 83 AKGELMEENQDGLEYSSEEEQEDLTSTAANL------ASKQKKELSKVDHSTIEYLPFRK 136
+K + + D SS++ + L+S + L K K+L +V+H I+Y+P +K
Sbjct: 625 SKNKKQNKGSDASFSSSDDTDDKLSSNKSELNYEENGMKKMNKKLLEVNHDEIDYIPIKK 684
Query: 137 DFYVEVPEIARMTPEEVEKYKE 158
+ YV+V EI M +V+ +++
Sbjct: 685 NIYVQVKEITNMKDSDVDMFRK 706
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 104 (41.7 bits), Expect = 0.00014, P = 0.00014
Identities = 34/140 (24%), Positives = 63/140 (45%)
Query: 26 EEDIDPLDAFMQGVHEEMRKVNKPAVPTTADVKPADSGSKPAXXXXXXXXXXXXX-EKAK 84
+++ D LDAFM G+ ++ K + D K P+ +++
Sbjct: 116 DDEEDELDAFMAGIEKQASSDKKVSEQKEKDRKEGKDTEDPSKKGLGRADIDEEDMQESL 175
Query: 85 GELMEENQDGLEYSSEEEQEDLTSTAANLASKQKK---ELSKVDHSTIEYLPFRKDFYVE 141
+ MEE ++ ++ +++EQ + N+ KK L +DHS I+Y F K+FY E
Sbjct: 176 FKFMEEYKE--KHENDDEQLEYDEDG-NIIWSWKKVIDPLPDIDHSQIQYQKFNKNFYEE 232
Query: 142 VPEIARMTPEEVEKYKEVDN 161
+I R+ +V + + N
Sbjct: 233 HEDIKRLHYMDVIRLQNTMN 252
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.304 0.124 0.335 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 161 131 0.00091 102 3 11 23 0.41 32
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 512 (54 KB)
Total size of DFA: 117 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.98u 0.10s 18.08t Elapsed: 00:00:05
Total cpu time: 17.98u 0.10s 18.08t Elapsed: 00:00:05
Start: Thu Aug 15 14:43:47 2013 End: Thu Aug 15 14:43:52 2013