RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12414
(71 letters)
>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain,
signaling protein, structural genomics, joint CE
structural genomics, JCSG; 1.50A {Homo sapiens} PDB:
1jwo_A
Length = 98
Score = 99 bits (250), Expect = 9e-30
Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
WFHGKIS + A L P EDGLFLVRES P D+ +CV F V HYRV +++ HLTID
Sbjct: 7 WFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTID 66
Query: 60 DEEFFENLAQLV 71
+ FF NL +V
Sbjct: 67 EAVFFCNLMDMV 78
>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*
Length = 138
Score = 100 bits (251), Expect = 1e-29
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
W+ G + R AES+LA + DG FLVR+ +F + + + +V+H ++ E I
Sbjct: 28 WYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRIT 87
Query: 60 DEEFFENLAQLV 71
+++ F L +LV
Sbjct: 88 EKKAFRGLTELV 99
>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced,
ATP-binding, cell membrane, cytoplasm, membrane,
nucleotide-binding, phosphoprotein; 1.31A {Homo
sapiens} PDB: 3eac_A
Length = 106
Score = 99.6 bits (249), Expect = 1e-29
Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV + KVEHYR+ Y + L+ID
Sbjct: 10 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSID 69
Query: 60 DEEFFENLAQLV 71
+E +FENL QLV
Sbjct: 70 EEVYFENLMQLV 81
>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 99.6 bits (249), Expect = 2e-29
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
WF G + R+ ++LL G +L+RE + F + + F +V+H +V K+ + I
Sbjct: 18 WFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHIT 77
Query: 60 DEEFFENLAQLV 71
+ + F++L +LV
Sbjct: 78 EAKKFDSLLELV 89
>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding
domain, protein tyrosine kinase, signal transduction,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 95.4 bits (238), Expect = 8e-28
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHLTI 58
W+HG +SR AE LL+ +G FLVRES + P + + +E +V HYR+ + + +
Sbjct: 18 WYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYV 77
Query: 59 DDEEFFENLAQLV 71
E F LA+LV
Sbjct: 78 TAESRFSTLAELV 90
>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding
protein, antibody mimic, protein-protein SH2 domain,
ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB:
3uyo_A 3t04_A 1ab2_A
Length = 112
Score = 94.6 bits (236), Expect = 1e-27
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHLTI 58
W+HG +SR AE LL+ +G FLVRES + P + + +E +V HYR+ + L +
Sbjct: 7 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 66
Query: 59 DDEEFFENLAQLV 71
E F LA+LV
Sbjct: 67 SSESRFNTLAELV 79
>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain,
protein protein interactions, PTR residues, HYDR
peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB:
3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A
Length = 109
Score = 94.3 bits (235), Expect = 2e-27
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
WFH I+ AE+LL + DG FL R S + P DF + V V H +++ + +
Sbjct: 9 WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDL 68
Query: 59 DDEEFFENLAQLV 71
E F LA+LV
Sbjct: 69 YGGEKFATLAELV 81
>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 111
Score = 92.3 bits (230), Expect = 1e-26
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
W+ G +SR+ A++ L + G+FLVR+S+ P D+ + V S+V HY +
Sbjct: 21 WYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKI 80
Query: 60 DEEFFENLAQLV 71
++ F++L L+
Sbjct: 81 GDQEFDHLPALL 92
>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide,
peptide binding protein; HET: PTR; 1.80A {Mus musculus}
SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*
Length = 100
Score = 91.5 bits (228), Expect = 2e-26
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
WFH +SR AE+LL K+ G F++R S + P DF + V E V+H++V
Sbjct: 11 WFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFL 70
Query: 60 DEEFFENLAQLV 71
E F +L +LV
Sbjct: 71 WTEKFPSLNKLV 82
>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform;
adapter protein, signaling protein; 2.00A {Mus
musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*
Length = 111
Score = 91.6 bits (228), Expect = 2e-26
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 1 WFHGKISRETAESLL---APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHL 56
WFHG +SR A L+ G+FLVR+S + + F+ K +H R+ A
Sbjct: 11 WFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQ 70
Query: 57 TIDDEEFFENLAQLV 71
F+++ ++
Sbjct: 71 CRVQHLHFQSIFDML 85
>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator,
P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 119
Score = 91.6 bits (228), Expect = 3e-26
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
WFHGKIS++ A +LL + FLVR S N P D+ + ++ +++ + +
Sbjct: 18 WFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFM 77
Query: 59 DDEEFFENLAQLV 71
++ ++ ++
Sbjct: 78 MGGRYYNSIGDII 90
>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6
(PTK6/BRK), SRC homology 2(S domain, solution
structure, backbone dynamics, transferase; NMR {Homo
sapiens} SCOP: d.93.1.1
Length = 100
Score = 90.7 bits (226), Expect = 3e-26
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
WF G ISR A L G FL+R S D+ + V V HY++ L
Sbjct: 4 WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRL 63
Query: 57 TIDDEEFFENLAQLV 71
+++ F +L +LV
Sbjct: 64 HLNEAVSFLSLPELV 78
>2dly_A FYN-related kinase; BRK family kinase, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 121
Score = 91.2 bits (227), Expect = 5e-26
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
WF G I R AE L + + G FL+RES + DF + V E V+HYR++ E
Sbjct: 18 WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGF 77
Query: 57 TIDDEEFFENLAQLV 71
+ + F L + V
Sbjct: 78 FLTRRKVFSTLNEFV 92
>1jyr_A Growth factor receptor-bound protein 2; receptor binding,
regulatory, inhibitor, signaling protein-I complex;
HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB:
1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A*
1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*
Length = 96
Score = 89.5 bits (223), Expect = 1e-25
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
WF GKI R AE +L+ + DG FL+RES + P DF + V F + V+H++V A
Sbjct: 5 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 64
Query: 59 DDEEFFENLAQLV 71
F +L +LV
Sbjct: 65 LWVVKFNSLNELV 77
>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain,
phosphotyrosine binding, signaling protein, signaling
protein-antagonist complex; HET: PTR; 1.60A {Homo
sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A*
3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A*
2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A*
1fyr_A* ...
Length = 117
Score = 89.3 bits (222), Expect = 2e-25
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
WF GKI R AE +L+ + DG FL+RES + P DF + V F + V+H++V A
Sbjct: 8 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 67
Query: 59 DDEEFFENLAQLV 71
F +L +LV
Sbjct: 68 LWVVKFNSLNELV 80
>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit;
transferase, polymorphism, UBL conjugation,
phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo
sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A
1oo4_A* 2pna_A 2pnb_A
Length = 120
Score = 88.9 bits (221), Expect = 3e-25
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRES-TNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
W+ G ISRE L DG FLVR++ T D+ + + + ++ +++
Sbjct: 13 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGF 72
Query: 59 DDEEFFENLAQLV 71
D F ++ +L+
Sbjct: 73 SDPLTFSSVVELI 85
>3pqz_A Growth factor receptor-bound protein 7; SH2, binds
phosphotyrosine, tyrosine kinases, cytoplasmic, P
binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A*
2qms_A
Length = 117
Score = 88.5 bits (220), Expect = 4e-25
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA--- 54
WFHG+ISRE ++ L+ DGLFLVRES PQ F + +C KV+HY + E
Sbjct: 16 WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGR 75
Query: 55 -HLTIDD-EEFFENLAQLV 71
+ ++DD + F +L QLV
Sbjct: 76 LYFSMDDGQTRFTDLLQLV 94
>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2
domain, signaling protein; 2.30A {Homo sapiens}
Length = 126
Score = 88.6 bits (220), Expect = 5e-25
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEA--- 54
WFH KISR+ A+ L+ DG+FLVR+S + P+ F + + K++H+++ E
Sbjct: 28 WFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGE 87
Query: 55 --HLTIDDEEFFENLAQLV 71
H D F +L QLV
Sbjct: 88 MFHTLDDGHTRFTDLIQLV 106
>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma
2; SH2, phosphoinositide phospholipase C, PLC-gamma-2,
phospholipase C-gamma-2; NMR {Rattus norvegicus}
Length = 124
Score = 88.1 bits (219), Expect = 8e-25
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 1 WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
W++ ++SR AE +L DG FL+R+ + + KV+H R+ H +
Sbjct: 21 WYYDRLSRGEAEDMLMRIPRDGAFLIRKREG-TDSYAITFRARGKVKHCRINRDGRHFVL 79
Query: 59 DDEEFFENLAQLV 71
+FE+L +LV
Sbjct: 80 GTSAYFESLVELV 92
>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen,
growth regulation, transforming protein, alternative
initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB:
1tce_A*
Length = 104
Score = 86.9 bits (216), Expect = 1e-24
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
WFHGK+SR AE+LL + +G FLVREST P + + + +H + E +
Sbjct: 9 WFHGKLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTK 66
Query: 60 DEEFFENLAQLV 71
D FE+++ L+
Sbjct: 67 DHR-FESVSHLI 77
>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain,
phosphotyrosine binding domain, protein tyrosine
kinase, signal transduction; NMR {Homo sapiens}
Length = 119
Score = 87.3 bits (217), Expect = 1e-24
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHLT 57
W HG I+R AE LL+ +DG FLVR S + + + +CV + + V YR+ ++ T
Sbjct: 12 WNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFT 71
Query: 58 IDDEE-----FFENLAQLV 71
+ E FF L QL+
Sbjct: 72 VQASEGVSMRFFTKLDQLI 90
>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: d.93.1.1
Length = 119
Score = 86.6 bits (215), Expect = 2e-24
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKE--AHLTI 58
WFHG ISRE AE+LL + G FL+R S + + +S H+ VK + +
Sbjct: 18 WFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIP 77
Query: 59 DDEEFFENLAQLV 71
++ +L LV
Sbjct: 78 GEKVAHTSLDALV 90
>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine
signal transduction lymphocyte, signaling protein; HET:
PTR; 2.15A {Mus musculus} SCOP: d.93.1.1
Length = 103
Score = 86.2 bits (214), Expect = 3e-24
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRV------KYK 52
++HG +++ E+LL DG FL+R+S + P +CV F+ V YR+ Y+
Sbjct: 5 YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYR 64
Query: 53 EAHLTIDDEEFFENLAQLV 71
F NL +LV
Sbjct: 65 IETDAHTPRTIFPNLQELV 83
>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling
protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB:
3m7f_A
Length = 105
Score = 85.0 bits (211), Expect = 7e-24
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-- 55
WFHG+ISRE + ++ DGLFL+R+S + P+ F + +C K++++++ E
Sbjct: 7 WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQ 66
Query: 56 --LTIDD-EEFFENLAQLV 71
++DD F +L QLV
Sbjct: 67 TFFSLDDGNTKFSDLIQLV 85
>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex
(phosphotransferase/receptor), phosphotransferase, SH2
domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1
PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A
Length = 112
Score = 85.0 bits (211), Expect = 9e-24
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-LTI 58
W G +R AE+LL K DG FLVRES+ + V + +V+H +
Sbjct: 12 WNVGSSNRNKAENLLRGKRDGTFLVRESSK-QGCYACSVVVDGEVKHCVINKTATGYGFA 70
Query: 59 DDEEFFENLAQLV 71
+ + +L +LV
Sbjct: 71 EPYNLYSSLKELV 83
>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain,
phosphorylation, binding specificity; HET: PTR MPD;
1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*
Length = 102
Score = 84.6 bits (210), Expect = 1e-23
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1 WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
W++G ++R AE L +G FL+R+S + P DF + + K +H++V+ + I
Sbjct: 7 WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI 66
Query: 59 DDEEFFENLAQLV 71
F + +LV
Sbjct: 67 GQRR-FHTMDELV 78
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 90.9 bits (226), Expect = 1e-23
Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
WFHGKI+RE AE LL P E GLFLVRESTN+P D+ +CV E KVEHYR+ Y + L+ID
Sbjct: 82 WFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSID 141
Query: 60 DEEFFENLAQLV 71
+E +FENL QLV
Sbjct: 142 EEVYFENLMQLV 153
>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2
domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1
d.93.1.1 PDB: 1csy_A* 1csz_A*
Length = 254
Score = 88.0 bits (218), Expect = 2e-23
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
+F G I+RE AE L DGL+L+R+S N+ F + V K HY ++
Sbjct: 7 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTY 66
Query: 57 TIDDEEFFENLAQLV 71
I + A L
Sbjct: 67 AIAGGRTHASPADLC 81
Score = 82.7 bits (204), Expect = 2e-21
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
WFHGKISRE +E ++ K +G FL+R N + +C+ E KV HYR+ K L
Sbjct: 160 WFHGKISREESEQIVLIGSKTNGKFLIRARDN-NGSYALCLLHEGKVLHYRIDKDKTGKL 218
Query: 57 TIDDEEFFENLAQLV 71
+I + + F+ L QLV
Sbjct: 219 SIPEGKKFDTLWQLV 233
>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development,
SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding,
nucleus, phosphoprotein; NMR {Homo sapiens}
Length = 116
Score = 84.3 bits (209), Expect = 2e-23
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
W+HG I R A+ LL K+ G FLVRES P ++ + V + + H+ ++Y + +
Sbjct: 19 WYHGAIPRIEAQELL--KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFE 76
Query: 60 DEEFFENLAQLV 71
F N+ QL+
Sbjct: 77 GTG-FSNIPQLI 87
>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70,
tyrosine kinase, transferase; HET: PTR; 1.90A {Homo
sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A
Length = 254
Score = 87.3 bits (216), Expect = 3e-23
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
+F+G ISR AE L A DGLFL+R+ + + + + + H+ ++
Sbjct: 8 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 67
Query: 57 TIDDEEFFENLAQLV 71
I + A+L
Sbjct: 68 AIAGGKAHCGPAELC 82
Score = 85.0 bits (210), Expect = 2e-22
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHL 56
W+H ++RE AE L + DG FL+R + + + + V HY + K
Sbjct: 161 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKY 219
Query: 57 TIDDEEFFENLAQLV 71
I + F+ L QLV
Sbjct: 220 CIPEGTKFDTLWQLV 234
>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein
binding/transferase complex; HET: PTR; NMR {Homo
sapiens} SCOP: d.93.1.1
Length = 109
Score = 83.4 bits (206), Expect = 5e-23
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
W+ G++SR+ A +LL + G+FLVR+S+ P D+ + V S+V HY + +
Sbjct: 2 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 61
Query: 60 -----------------DEEFFENLAQLV 71
++ F++L L+
Sbjct: 62 PSPAQPPPGVSPSRLRIGDQEFDSLPALL 90
>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal
transduction inhibitor, KIT regula phosphotyrosine,
signaling protein; HET: PTR; 1.45A {Homo sapiens}
Length = 141
Score = 84.1 bits (208), Expect = 5e-23
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
W+ G I+R AE LA DG FLVR+S++ + K H R+++ +
Sbjct: 26 WYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFY 85
Query: 60 ---DEEFFENLAQLV 71
D E ++ L+
Sbjct: 86 EQPDVEGHTSIVDLI 100
>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine
kinase, signal transduction, peptide recognition,
signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1
PDB: 1d1z_A 1d4w_A* 1m27_A*
Length = 104
Score = 82.8 bits (205), Expect = 7e-23
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV------KYK 52
+HGKISRET E LL A DG +L+R+S + P + +CV + + YRV +
Sbjct: 6 VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWS 65
Query: 53 EAHLTIDDEEFFENLAQLV 71
+ +F + L+
Sbjct: 66 AETAPGVHKRYFRKIKNLI 84
>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex,
immune system; HET: PTR; NMR {Homo sapiens} SCOP:
d.93.1.1 PDB: 1ka7_A
Length = 128
Score = 82.5 bits (204), Expect = 1e-22
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV------KYK 52
+HGKISRET E LL A DG +L+R+S + P + +CV + + YRV +
Sbjct: 6 VYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWS 65
Query: 53 EAHLTIDDEEFFENLAQLV 71
+ +F + L+
Sbjct: 66 AETAPGVHKRYFRKIKNLI 84
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 86.4 bits (214), Expect = 4e-22
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKY-KEAHLTI 58
W+HG +SR AE LL+ +G FLVRES + P + + +E +V HYR+ + L +
Sbjct: 107 WYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYV 166
Query: 59 DDEEFFENLAQLV 71
E F LA+LV
Sbjct: 167 SSESRFNTLAELV 179
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5-
triphosphate, wortmannin, H1047R, ATP-binding, disease
mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB:
3hiz_B 2rd0_B 4a55_B* 3mtt_A
Length = 373
Score = 85.3 bits (210), Expect = 7e-22
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRES-TNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
W+ G ISRE L DG FLVR++ T D+ + + + ++ +++
Sbjct: 12 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGF 71
Query: 59 DDEEFFENLAQLV 71
D F ++ +L+
Sbjct: 72 SDPLTFSSVVELI 84
Score = 71.0 bits (173), Expect = 1e-16
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEA-HLTID 59
W G +R AE+LL K DG FLVRES+ V + +V+H + + +
Sbjct: 303 WNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGFAE 362
Query: 60 DEEFFENLAQL 70
+ +L +L
Sbjct: 363 PYNLYSSLKEL 373
>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; 2.50A {Mus musculus}
Length = 138
Score = 81.0 bits (200), Expect = 8e-22
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 1 WFHGKI-SRETAESLL------APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK 52
WFH K+ SR +AE LL +DG FLVRES FP D+ + +V+H R++
Sbjct: 24 WFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRST 83
Query: 53 E----AHLTIDDEEFFENLAQLV 71
+ D F ++ L+
Sbjct: 84 MENGVMKYYLTDNLTFNSIYALI 106
>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction,
peptide complex, complex (proto-oncogene/early
protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1
PDB: 1aou_F*
Length = 106
Score = 79.6 bits (197), Expect = 9e-22
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFES-----KVEHYRVKY- 51
W+ GK+ R+ AE L G FL+RES + + + V+HY+++
Sbjct: 7 WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 66
Query: 52 KEAHLTIDDEEFFENLAQLV 71
I FE L QLV
Sbjct: 67 DNGGYYITTRAQFETLQQLV 86
>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide);
HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB:
1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A*
1cwd_L* 1cwe_A*
Length = 105
Score = 79.6 bits (197), Expect = 1e-21
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 1 WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESK-----VEHYRVKY- 51
WF +SR+ AE L G FL+RES + F + V + V+HY+++
Sbjct: 6 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65
Query: 52 KEAHLTIDDEEFFENLAQLV 71
I F L +LV
Sbjct: 66 DNGGFYISPRITFPGLHELV 85
>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 125
Score = 79.6 bits (197), Expect = 1e-21
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCF------ESKVEHYRVKY- 51
W+H I+R AE LL + ++G F+VR+S + + + V E+ ++HY++K
Sbjct: 18 WYHRNITRNQAEHLLRQESKEGAFIVRDSRH-LGSYTISVFMGARRSTEAAIKHYQIKKN 76
Query: 52 KEAHLTIDDEEFFENLAQLV 71
+ + F+++ +L+
Sbjct: 77 DSGQWYVAERHAFQSIPELI 96
>1blj_A P55 BLK protein tyrosine kinase; signal transduction,
transferase, phosphotransferase, phosphorylation; NMR
{Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A
Length = 114
Score = 78.5 bits (194), Expect = 3e-21
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCV----CFESKVEHYRV-KYK 52
WF ISR+ AE L + G FL+RES + F + V V+HY++
Sbjct: 14 WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73
Query: 53 EAHLTIDDEEFFENLAQLV 71
I F L LV
Sbjct: 74 NGGYYISPRITFPTLQALV 92
>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor,
growth regulation, signal transduction, SH2 domain,
nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1
d.93.1.1
Length = 187
Score = 80.7 bits (199), Expect = 3e-21
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
+ G + + AE+LL K +G FL+R+S F + S+ H R++ + + D
Sbjct: 36 CYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFD 95
Query: 60 DEEF----FENLAQLV 71
+ ++ L+
Sbjct: 96 AHDPCVFHSPDITGLL 111
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 83.1 bits (205), Expect = 8e-21
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYK-EAHL 56
+F+G ISR AE L A DGLFL+R+ + + + + + H+ ++ +
Sbjct: 10 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 69
Query: 57 TIDDEEFFENLAQLV 71
I + A+L
Sbjct: 70 AIAGGKAHCGPAELC 84
Score = 73.8 bits (181), Expect = 1e-17
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRV-KYKEAHL 56
W+H ++RE AE L + DG FL+R + + + + V HY + + K
Sbjct: 163 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKY 221
Query: 57 TIDDEEFFENLAQLV 71
I + F+ L QLV
Sbjct: 222 CIPEGTKFDTLWQLV 236
>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2
domain, signal transduction inhibitor nuclear protein;
1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1
Length = 169
Score = 78.3 bits (193), Expect = 1e-20
Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
W+ G ++ A+ L +G FL+R+S++ + V + + R++Y++ +D
Sbjct: 19 WYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLD 78
Query: 60 DEEF-------FENLAQLV 71
F+++ L+
Sbjct: 79 SIICVKSKLKQFDSVVHLI 97
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 81.5 bits (202), Expect = 2e-20
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDD 60
W+HG I R LL G FLVRES + + V ++ H+ ++ + +L +
Sbjct: 15 WYHGAIPRAEVAELL--VHSGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLD-NLYRLE 71
Query: 61 EEFFENLAQLV 71
E F ++ L+
Sbjct: 72 GEGFPSIPLLI 82
>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain,
phosphotyrosine binding domain, protein tyrosine
kinase, signal transduction; NMR {Homo sapiens}
Length = 110
Score = 76.5 bits (189), Expect = 2e-20
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCF------ESKVEHYRVKY- 51
WF G ISR +E LL K ++G F+VR S+ + + + + V+HY V
Sbjct: 13 WFAGNISRSQSEQLLRQKGKEGAFMVRNSSQ-VGMYTVSLFSKAVNDKKGTVKHYHVHTN 71
Query: 52 KEAHLTIDDEEFFENLAQLV 71
E L + + F+++ +L+
Sbjct: 72 AENKLYLAENYCFDSIPKLI 91
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene
homolog (avian)- signaling protein; NMR {Homo sapiens}
PDB: 2lqw_A*
Length = 303
Score = 79.7 bits (195), Expect = 4e-20
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
W+ G +SR+ A++ L + G+FLVR+S+ P D+ + V S+V HY +
Sbjct: 14 WYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKI 73
Query: 60 DEEFFENLAQLV 71
++ F++L L+
Sbjct: 74 GDQEFDHLPALL 85
>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase;
NMR {Homo sapiens}
Length = 125
Score = 75.8 bits (187), Expect = 5e-20
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFES------KVEHYRVKY- 51
W+ ++R AE LL + ++G F+VR+S+ + + V +S + HY V
Sbjct: 13 WYSKHMTRSQAEQLLKQEGKEGGFIVRDSSK-AGKYTVSVFAKSTGDPQGVIRHYVVCST 71
Query: 52 KEAHLTIDDEEFFENLAQLV 71
++ + ++ F + +L+
Sbjct: 72 PQSQYYLAEKHLFSTIPELI 91
>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2
subdomain, PEST motif, protein complex, cytokine
regulator; HET: PTR; NMR {Mus musculus}
Length = 164
Score = 76.9 bits (189), Expect = 6e-20
Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
++ ++ A LL+ + G FL+R+S++ F + V +S ++ R++ + ++
Sbjct: 25 FYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQ 84
Query: 60 DEEF-------FENLAQLV 71
+ F+ + +LV
Sbjct: 85 SDPRSTQPVPRFDCVLKLV 103
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase,
phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus
musculus}
Length = 302
Score = 78.9 bits (194), Expect = 8e-20
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAH-LTI 58
W+ GKI+R AE +L+ K DG FL+RES+ + V + +H +
Sbjct: 196 WYVGKINRTQAEEMLSGKRDGTFLIRESSQ-RGCYACSVVVDGDTKHCVIYRTATGFGFA 254
Query: 59 DDEEFFENLAQLV 71
+ + +L +LV
Sbjct: 255 EPYNLYGSLKELV 267
>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2
domain, feline sarcoma oncogene, structural genomics;
NMR {Homo sapiens} PDB: 2dcr_A
Length = 114
Score = 74.3 bits (183), Expect = 2e-19
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTIDD 60
W+HG I R LL G FLVRES + + V ++ H+ ++ + ++
Sbjct: 18 WYHGAIPRAEVAELL--VHSGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLDNLYRLEG 75
Query: 61 EEFFENLAQLV 71
E F ++ L+
Sbjct: 76 EG-FPSIPLLI 85
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2,
signal transduction, adapter molecule, signaling
protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A
2eyv_A 2eyw_A
Length = 230
Score = 76.9 bits (188), Expect = 2e-19
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
W+ G++SR+ A +LL + G+FLVR+S+ P D+ + V S+V HY + +
Sbjct: 15 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 74
Query: 60 DEEFFEN 66
Sbjct: 75 PSPAQPP 81
>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition,
tandem SH2 domains, A analog, ATP-binding,
craniosynostosis, disease mutation; HET: PTR DVT ACP;
2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A*
Length = 226
Score = 75.7 bits (186), Expect = 5e-19
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
W+H ++R AE +L DG FLVR+ P + + E K++H RV+ +E +
Sbjct: 124 WYHASLTRAQAEHMLMRVPRDGAFLVRKRNE-PNSYAISFRAEGKIKHCRVQ-QEGQTVM 181
Query: 59 DDEEFFENLAQLV 71
F++L L+
Sbjct: 182 LGNSEFDSLVDLI 194
Score = 70.3 bits (172), Expect = 5e-17
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 1 WFHGKIS-----RETAESLLAP------KEDGLFLVRESTNFPQDF-MCVCFESKVEHYR 48
WFHGK+ R AE LL DG FLVRES F D+ + KV+H R
Sbjct: 6 WFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCR 65
Query: 49 VKYKEA----HLTIDDEEFFENLAQLV 71
+ ++ + D F++L L+
Sbjct: 66 IHSRQDAGTPKFFLTDNLVFDSLYDLI 92
>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS
proline, domain swapped dimer, SH transferase; HET:
CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A
1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B
Length = 118
Score = 71.6 bits (176), Expect = 2e-18
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 1 WFHGKISRETAESLL-APKEDGLFLVRESTNFPQDF-MCVCFESK------VEHYRVKY- 51
W++ ISR+ AE LL ++G F+VR+S P + + V ++ ++HY +K
Sbjct: 11 WYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKET 69
Query: 52 --KEAHLTIDDEEFFENLAQLV 71
+ ++ F+++ L+
Sbjct: 70 NDSPKRYYVAEKYVFDSIPLLI 91
>3maz_A Signal-transducing adaptor protein 1; modular domain,
phosphotyrosine, specificity, cytoplasm,
phosphoprotein, SH2 domain, signaling protein; HET:
PTR; 1.90A {Homo sapiens}
Length = 125
Score = 71.4 bits (175), Expect = 3e-18
Identities = 15/78 (19%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFE---SKVEHYRVKYKEAH 55
+SR+ A +L G ++R ++ +++ + + E +++HY+V +
Sbjct: 17 ACFYTVSRKEATEMLQKNPSLGNMILRPGSD-SRNYSITIRQEIDIPRIKHYKVMSVGQN 75
Query: 56 LTIDDEE--FFENLAQLV 71
TI+ E+ NL ++
Sbjct: 76 YTIELEKPVTLPNLFSVI 93
>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide
complex, cytokine regulator; HET: PTR; 2.00A {Mus
musculus}
Length = 152
Score = 71.9 bits (176), Expect = 4e-18
Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
++ ++ A LL+ + G FL+R+S++ F + V +S ++ R++ + ++
Sbjct: 36 FYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQ 95
Query: 60 DEEF-------FENLAQLV 71
+ F+ + +LV
Sbjct: 96 SDPRSTQPVPRFDXVLKLV 114
>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 126
Score = 70.6 bits (172), Expect = 7e-18
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLL------APKEDGLFLVRESTNFPQDFMCV--CFESKVEHYRVKYK 52
F E L +DGL+ +R S+ + V +KV +YR+ K
Sbjct: 19 VFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEK 78
Query: 53 EAHLTIDDEEFFENLAQLV 71
++ ++ E F ++ +V
Sbjct: 79 DSKFYLEGEVLFVSVGSMV 97
>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell
adapter containing SH2 domain protein; NMR {Mus
musculus}
Length = 141
Score = 70.3 bits (172), Expect = 1e-17
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF---MCVCFESKVEHYRVKYKEAH- 55
W+ G R++AE L +DG FL+R+S+ + F +V + V++ EA
Sbjct: 25 WYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATK 84
Query: 56 -----LTIDDEEFFENLAQLV 71
+ EE+F ++ ++V
Sbjct: 85 QYALGKKKNGEEYFGSVVEIV 105
>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1,
solution structure, cell junctio membrane, hydrolase,
membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A
Length = 131
Score = 69.2 bits (169), Expect = 3e-17
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 19/90 (21%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCV----------------CFESKV 44
W+ +SR+ A +LL K+ G FL+R+S +F + E V
Sbjct: 22 WYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLV 81
Query: 45 EHYRVKYKEAHLTI---DDEEFFENLAQLV 71
H+ ++ + I E +F +L+ LV
Sbjct: 82 RHFLIETGPKGVKIKGCPSEPYFGSLSALV 111
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 69.9 bits (171), Expect = 3e-16
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 1 WFHGKISRETAESLLAP--KEDGLFLVRESTNFPQDF-MCVCFE-----SKVEHYRV-KY 51
W+ GKI+R +E LL G FLVRES + + V V+HY++ K
Sbjct: 150 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 209
Query: 52 KEAHLTIDDEEFFENLAQLV 71
I F +L QLV
Sbjct: 210 DSGGFYITSRTQFNSLQQLV 229
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3,
signaling protein; NMR {Homo sapiens} PDB: 2l3s_A
2l3p_A 2l3q_A 2ggr_A
Length = 304
Score = 69.6 bits (169), Expect = 3e-16
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTID 59
W+ G++SR+ A +LL + G+FLVR+S+ P D+ + V S+V HY + +
Sbjct: 13 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 72
Query: 60 DEEFFEN 66
Sbjct: 73 PSPAQPP 79
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 69.7 bits (171), Expect = 3e-16
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 1 WFHGKISRETAESLLAPKED--GLFLVRESTNFPQDF-MCVCFES-----KVEHYRVKY- 51
WF ISR+ AE L + G F++R+S + + V V+HY+++
Sbjct: 72 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 131
Query: 52 KEAHLTIDDEEFFENLAQLV 71
I F L +LV
Sbjct: 132 DNGGFYISPRSTFSTLQELV 151
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 64.4 bits (157), Expect = 3e-14
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 1 WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFE-----SKVEHYRVK-Y 51
W+ GKI+R +E LL E G FLVRES + + V V+HY+++
Sbjct: 67 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 126
Query: 52 KEAHLTIDDEEFFENLAQLV 71
I F +L QLV
Sbjct: 127 DSGGFYITSRTQFNSLQQLV 146
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3
domain, structural genomics center for structural
genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A*
1x27_A*
Length = 175
Score = 57.8 bits (139), Expect = 2e-12
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 1 WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDF-MCVCFESK-----VEHYRVKY- 51
WF +SR+ AE L G FL+RES + F + V + V+HY+++
Sbjct: 76 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 135
Query: 52 KEAHLTIDDEEFFENLAQLV 71
I F L +LV
Sbjct: 136 DNGGFYISPRITFPGLHELV 155
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction
adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1
d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Length = 217
Score = 57.0 bits (137), Expect = 5e-12
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAP-KEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
WF GKI R AE +L+ + DG FL+RES + P DF + V F + V+H++V A
Sbjct: 60 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 119
Query: 59 DDEEFFENLAQLV 71
F +L +LV
Sbjct: 120 LWVVKFNSLNELV 132
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 56.8 bits (137), Expect = 1e-11
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
WFH I+ AE+LL + DG FL R S + P D + V V H +++ + +
Sbjct: 6 WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDL 65
Query: 59 DDEEFFENLAQLV 71
E F LA+LV
Sbjct: 66 YGGEKFATLAELV 78
Score = 43.3 bits (102), Expect = 8e-07
Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF 35
WFHG +S + AE LL K + G FLVRES + P DF
Sbjct: 112 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDF 147
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein
tyrosine phosphatase, SHP-1, signaling, hydrolase;
2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 56.4 bits (136), Expect = 1e-11
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
WFH +S AE+LL + G FL R S DF + V +V H R++ +
Sbjct: 4 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 63
Query: 59 DDEEFFENLAQLV 71
E F L +LV
Sbjct: 64 YGGEKFATLTELV 76
Score = 28.3 bits (63), Expect = 0.16
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF 35
W+HG +S AE+LL K E FLVRES + P DF
Sbjct: 110 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDF 145
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 56.5 bits (136), Expect = 2e-11
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTI 58
WFH +S AE+LL + G FL R S DF + V +V H R++ +
Sbjct: 4 WFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDL 63
Query: 59 DDEEFFENLAQLV 71
E F L +LV
Sbjct: 64 YGGEKFATLTELV 76
Score = 27.6 bits (61), Expect = 0.24
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF 35
W+HG +S AE+LL K E FLVRES + P DF
Sbjct: 110 WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDF 145
>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine
binding domain, protein tyrosine kinase, signal
transduction, structural genomics; NMR {Homo sapiens}
Length = 118
Score = 51.7 bits (123), Expect = 1e-10
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 1 WFHGKISRETAESLLAPK-EDGLFLVRESTNFPQDF-MCVCFESK----VEHYRVKYKEA 54
K+SR A+ LL E G L+R S + + V HY+VK +
Sbjct: 23 SCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGP 82
Query: 55 HLTIDDEE--FFENLAQLV 71
ID E+ +L +V
Sbjct: 83 KYVIDVEQPFSCTSLDAVV 101
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC,
gtpas activation, metal-binding, phorbol-ester binding,
SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Length = 463
Score = 50.3 bits (120), Expect = 2e-09
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 2 FHGKISRETAESLLAPKEDGLFLVRESTNFPQDF-MCVCFESKVEHYRVKYKEAHLTIDD 60
FHG ISRE A+ LL +G +L+RES P + + + F S+ ++R+ Y H
Sbjct: 54 FHGMISREAADQLLI-VAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFV--G 110
Query: 61 EEFFENLAQLV 71
E+ FE++ LV
Sbjct: 111 EKRFESIHDLV 121
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.01A {Caenorhabditis elegans}
Length = 174
Score = 48.2 bits (114), Expect = 6e-09
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 1 WFHGKISRETAESLLAPKE--DGLFLVRESTNFPQDFMCVCFE----SKVEHYRVKYKE 53
++ +SRE A LL + G FL+R+S+ P ++ E + V HY ++ E
Sbjct: 14 FYFPGMSREEAHKLLGEPQVSIGTFLMRDSSR-PGEYSLTVREADEGNAVCHYLIERGE 71
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.52A {Caenorhabditis elegans}
Length = 308
Score = 46.7 bits (110), Expect = 5e-08
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 1 WFHGKISRETAESLL--APKEDGLFLVRESTNFPQDF-MCVCFESK---VEHYRV 49
++ +SRE A LL G FL+R+S+ P ++ + V + V HY +
Sbjct: 43 FYFPGMSREEAHKLLGEPQVSIGTFLMRDSSR-PGEYSLTVREADEGNAVCHYLI 96
>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal
transduction, transducer, transcription factor; HET:
PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1
b.2.5.5 d.93.1.1 PDB: 1uus_A*
Length = 473
Score = 45.0 bits (105), Expect = 2e-07
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFES----KVEHYRVKYKEAHL 56
+G + R+ L ++ G F++R S P F +++HY V+ +
Sbjct: 353 IIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTAA 412
Query: 57 TIDD-EEFFENLAQLV 71
+F +Q V
Sbjct: 413 AKKTFPDFLSEHSQFV 428
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched
library, clone:9530076O17...; SH3_1 domain; NMR {Mus
musculus}
Length = 109
Score = 34.0 bits (78), Expect = 9e-04
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1 WFHGKISRETAESLL 15
W+ GK+ R+ AES
Sbjct: 92 WYFGKMGRKDAESGP 106
>1y1u_A Signal transducer and activator of transcription; STAT,
DNA-binding, SH2 domain, transcription REGU signaling
protein; 3.21A {Mus musculus}
Length = 585
Score = 33.6 bits (76), Expect = 0.002
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRESTNFPQDFMCVCFESKVEHYRVKYKEAHLTID 59
G ++++ A LL K DG FL+R S + + ++ + + T D
Sbjct: 466 AILGFVNKQQAHDLLINKPDGTFLLRFSDSEIGGI-TIAWKFDSPDRNLWNLKPFTTRD 523
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex,
cytokine activation, complex (transcription factor/DNA),
transcription/DNA complex; HET: DNA PTR; 2.25A {Mus
musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Length = 596
Score = 32.5 bits (73), Expect = 0.006
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRES 28
+ G IS+E ++L+ K G FL+R S
Sbjct: 458 YIMGFISKERERAILSTKPPGTFLLRFS 485
>1bf5_A Signal transducer and activator of transcription 1-alpha/beta;
complex (SH2 domain/DNA), SH2 domain, transcription
factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP:
a.47.1.1 b.2.5.5 d.93.1.1
Length = 575
Score = 31.8 bits (71), Expect = 0.010
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVREST 29
G IS+E +LL ++ G FL+R S
Sbjct: 442 CIMGFISKERERALLKDQQPGTFLLRFSE 470
>1yvl_A Signal transducer and activator of transcription 1-alpha/beta;
signaling protein; HET: PTR; 3.00A {Homo sapiens}
Length = 683
Score = 30.6 bits (68), Expect = 0.029
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 1 WFHGKISRETAESLLAPKEDGLFLVRES 28
G IS+E +LL ++ G FL+R S
Sbjct: 577 CIMGFISKERERALLKDQQPGTFLLRFS 604
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET:
07J; 2.80A {Homo sapiens}
Length = 382
Score = 29.3 bits (66), Expect = 0.078
Identities = 2/29 (6%), Positives = 10/29 (34%), Gaps = 1/29 (3%)
Query: 44 VEHYRVK-YKEAHLTIDDEEFFENLAQLV 71
+ +Y + + + + +F +
Sbjct: 1 MGYYHHHHHHDYDIPTTENLYFNGMGYYH 29
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding,
signaling, HCK SH3 domain, PR binding; 3.45A {Homo
sapiens}
Length = 90
Score = 24.3 bits (53), Expect = 2.4
Identities = 5/19 (26%), Positives = 7/19 (36%)
Query: 1 WFHGKISRETAESLLAPKE 19
G+ R AE + K
Sbjct: 66 SGGGRHRRRQAERMSQIKR 84
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics,
nysgxrc T18, GTPase, PSI, protein structure initiative;
HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8
Length = 282
Score = 25.0 bits (55), Expect = 2.4
Identities = 5/25 (20%), Positives = 11/25 (44%)
Query: 45 EHYRVKYKEAHLTIDDEEFFENLAQ 69
E + +Y + D E F+ + +
Sbjct: 219 ERLKERYGLDEIPEDIAELFDAIGE 243
>1e7l_A GP49, recombination endonuclease VII; resolvase, holliday
junction, DNAse; HET: SO4; 1.32A {Bacteriophage T4}
SCOP: a.140.4.1 d.4.1.5 PDB: 2qnc_A* 1en7_A 1e7d_A
2qnf_A*
Length = 157
Score = 24.0 bits (51), Expect = 5.7
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 37 CVCFESKVEHYRVKYKEAHLTIDDEEFFENLAQ 69
C E +++H + +D E+ ENL
Sbjct: 61 CDAAEGQMKHKFNRSGLKGQGVDYLEWLENLLT 93
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.137 0.418
Gapped
Lambda K H
0.267 0.0533 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,051,069
Number of extensions: 46422
Number of successful extensions: 331
Number of sequences better than 10.0: 1
Number of HSP's gapped: 195
Number of HSP's successfully gapped: 92
Length of query: 71
Length of database: 6,701,793
Length adjustment: 41
Effective length of query: 30
Effective length of database: 5,557,032
Effective search space: 166710960
Effective search space used: 166710960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.9 bits)