BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1242
(540 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg PE=1 SV=3
Length = 3578
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 219/314 (69%), Positives = 261/314 (83%), Gaps = 16/314 (5%)
Query: 225 MSPMMFSTVLDDVCMSLKFPSNSPICHVTANTYVTLHMPSVVTVTANHQFAINRWNPDYA 284
+SPMMFS + +D+C LKF NSP+ H++ANTY L +PSVVTVTA HQFA+NRWN +Y
Sbjct: 3200 LSPMMFSAMPEDLCQMLKFYQNSPVIHISANTYPQLSLPSVVTVTAGHQFAVNRWNCNYT 3259
Query: 285 ASIQSPSYAETPGSPPGNLPLTLDPILT-HPTSNNNAPVPKRHLGDNFSQKLRVRHNCFV 343
AS+QSPSYAE+P SP N PLT+DP+L H T+NN+ +RHLGDNFSQ L++R NCFV
Sbjct: 3260 ASVQSPSYAESPQSPGSNQPLTIDPVLAVHGTNNNSNAASRRHLGDNFSQMLKIRSNCFV 3319
Query: 344 TTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLSRS 403
TTVDSRFL+ACGFWDNSFRVF+T+ T++IVQI+FGH+GVVTC++RS
Sbjct: 3320 TTVDSRFLIACGFWDNSFRVFATE---------------TAKIVQIVFGHFGVVTCMARS 3364
Query: 404 ECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAEL 463
ECNIT+DC+IASGSADCTVLLWHWNARTQSIVGE D PTPRATLTGHEQ VTSV ISAEL
Sbjct: 3365 ECNITSDCYIASGSADCTVLLWHWNARTQSIVGEGDVPTPRATLTGHEQAVTSVVISAEL 3424
Query: 464 GLVVSGSQLGPVLVHTTFGDLLRSLDPPSGFASPESVVMSREGVIVVNYERGHIAAFTMN 523
GLVVSGS GPVL+HTTFGDLLRSLDPP+ F SPE + MSREG IV+NY++G++AA+T+N
Sbjct: 3425 GLVVSGSSNGPVLIHTTFGDLLRSLDPPAEFHSPELITMSREGFIVINYDKGNVAAYTIN 3484
Query: 524 GNRLRHESHNDNLQ 537
G +LRHE+HNDNLQ
Sbjct: 3485 GKKLRHETHNDNLQ 3498
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 72/96 (75%), Positives = 81/96 (84%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + I GRTYNDLNQYP+FPWVLTNY+SK+LDLSL +NYRDLSKPIGALNPSR A
Sbjct: 2928 FEYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRA 2987
Query: 75 YFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
YFEERY SW+ + I PFHYGTHYST + LNWLVRV
Sbjct: 2988 YFEERYESWDSDTIPPFHYGTHYSTAAFTLNWLVRV 3023
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 116 NPSPSIQSPSYAETPGSPPGNLPLTLDPILT-HPTSNNNAPVPKRHLGDNFSQKLRVR 172
N + S+QSPSYAE+P SP N PLT+DP+L H T+NN+ +RHLGDNFSQ L++R
Sbjct: 3257 NYTASVQSPSYAESPQSPGSNQPLTIDPVLAVHGTNNNSNAASRRHLGDNFSQMLKIR 3314
>sp|Q8NFP9|NBEA_HUMAN Neurobeachin OS=Homo sapiens GN=NBEA PE=1 SV=3
Length = 2946
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 194/315 (61%), Gaps = 30/315 (9%)
Query: 226 SPMMFSTVLD-DVCMSLKFPSNSPICHVTANTYVTLHMPSVVTVTANHQFAINRWNPDYA 284
SP+MF + DV M LKFPSNSP+ HV ANT L +P+VVTVT + FA+NRW+ +
Sbjct: 2575 SPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWH-NTV 2633
Query: 285 ASIQSPSYAETPGSPPGNLPLTLDPILTHPTSNNNAPVPKRHLGDNFSQKLRVRHNCFVT 344
+P Y+ +LP+ +DP++ NN+ V KR + D Q +++ +CFV
Sbjct: 2634 GLRGAPGYSLDQAH---HLPIEMDPLIA-----NNSGVNKRQITDLVDQSIQINAHCFVV 2685
Query: 345 TVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLSRSE 404
T D+R++L CGFWD SFRV+ST+ T ++ QI+FGH+ VVTCL+RSE
Sbjct: 2686 TADNRYILICGFWDKSFRVYSTE---------------TGKLTQIVFGHWDVVTCLARSE 2730
Query: 405 CNITADCFIASGSADCTVLLWHWNARTQSIVGE----TDTPTPRATLTGHEQPVTSVAIS 460
I DC+I SGS D T+LLW+W+ R I+G+ +D P PRA LTGH+ V V++
Sbjct: 2731 SYIGGDCYIVSGSRDATLLLWYWSGR-HHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVC 2789
Query: 461 AELGLVVSGSQLGPVLVHTTFGDLLRSLDPPSGFASPESVVMSREGVIVVNYERGHIAAF 520
AELGLV+SG++ GP LVHT GDLLR+L+ P P + +S EG ++ YERG + F
Sbjct: 2790 AELGLVISGAKEGPCLVHTITGDLLRALEGPENCLFPRLISVSSEGHCIIYYERGRFSNF 2849
Query: 521 TMNGNRLRHESHNDN 535
++NG L ND+
Sbjct: 2850 SINGKLLAQMEINDS 2864
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 74/96 (77%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + I GRTYNDLNQYPVFPWVLTNY+S+ELDL+L N+RDLSKPIGALNP R
Sbjct: 2297 FEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAV 2356
Query: 75 YFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
++ ERY +WE + P+HY THYST L+WLVR+
Sbjct: 2357 FYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRI 2392
>sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus GN=Nbea PE=1 SV=1
Length = 2936
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 194/315 (61%), Gaps = 30/315 (9%)
Query: 226 SPMMFSTVLD-DVCMSLKFPSNSPICHVTANTYVTLHMPSVVTVTANHQFAINRWNPDYA 284
SP+MF + DV M LKFPSNSP+ HV ANT L +P+VVTVT + FA+NRW+ +
Sbjct: 2565 SPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWH-NTV 2623
Query: 285 ASIQSPSYAETPGSPPGNLPLTLDPILTHPTSNNNAPVPKRHLGDNFSQKLRVRHNCFVT 344
+P Y+ +LP+ +DP++ NN+ V KR + D Q +++ +CFV
Sbjct: 2624 GLRGAPGYSLDQAH---HLPIEMDPLIA-----NNSGVNKRQITDLVDQSIQINAHCFVV 2675
Query: 345 TVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLSRSE 404
T D+R++L CGFWD SFRV+ST+ T ++ QI+FGH+ VVTCL+RSE
Sbjct: 2676 TADNRYILICGFWDKSFRVYSTE---------------TGKLTQIVFGHWDVVTCLARSE 2720
Query: 405 CNITADCFIASGSADCTVLLWHWNARTQSIVGE----TDTPTPRATLTGHEQPVTSVAIS 460
I DC+I SGS D T+LLW+W+ R I+G+ +D P PRA LTGH+ V V++
Sbjct: 2721 SYIGGDCYIVSGSRDATLLLWYWSGR-HHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVC 2779
Query: 461 AELGLVVSGSQLGPVLVHTTFGDLLRSLDPPSGFASPESVVMSREGVIVVNYERGHIAAF 520
AELGLV+SG++ GP LVHT GDLLR+L+ P P + +S EG ++ YERG + F
Sbjct: 2780 AELGLVISGAKEGPCLVHTITGDLLRALEGPENCLFPRLISVSSEGHCIIYYERGRFSNF 2839
Query: 521 TMNGNRLRHESHNDN 535
++NG L ND+
Sbjct: 2840 SINGKLLAQMEINDS 2854
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 74/96 (77%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + I GRTYNDLNQYPVFPWVLTNY+S+ELDL+L N+RDLSKPIGALNP R
Sbjct: 2287 FEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAV 2346
Query: 75 YFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
++ ERY +WE + PFHY THYST L+WLVR+
Sbjct: 2347 FYAERYETWEEDQSPPFHYNTHYSTATSALSWLVRI 2382
>sp|P50851|LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo
sapiens GN=LRBA PE=1 SV=4
Length = 2863
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 191/318 (60%), Gaps = 34/318 (10%)
Query: 225 MSPMMFS-TVLDDVCMSLKFPSNSPICHVTANTYVTLHMPSVVTVTANHQFAINRWN--P 281
+SP+MF+ DV M LKFPSNSP+ HV ANT L P+V+TVTAN FA+N+W+ P
Sbjct: 2495 VSPLMFTDKAQQDVIMVLKFPSNSPVTHVAANTQPGLATPAVITVTANRLFAVNKWHNLP 2554
Query: 282 DYAASIQSPSYAETPGSPPGNLPLTLDPILTHPTSNNNAPVPKRHLGDNFSQKLRVRHNC 341
+ ++Q Y LP+ +DP++ +N + +R + D Q ++V C
Sbjct: 2555 AHQGAVQDQPY---------QLPVEIDPLIA-----SNTGMHRRQITDLLDQSIQVHSQC 2600
Query: 342 FVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLS 401
FV T D+R++L CGFWD SFRV+STD T R++Q++FGH+ VVTCL+
Sbjct: 2601 FVITSDNRYILVCGFWDKSFRVYSTD---------------TGRLIQVVFGHWDVVTCLA 2645
Query: 402 RSECNITADCFIASGSADCTVLLWHWNARTQSIVGE--TDTPTPRATLTGHEQPVTSVAI 459
RSE I +C+I SGS D T+LLW+WN + I ++T PRA LTGH+ VT A+
Sbjct: 2646 RSESYIGGNCYILSGSRDATLLLWYWNGKCSGIGDNPGSETAAPRAILTGHDYEVTCAAV 2705
Query: 460 SAELGLVVSGSQLGPVLVHTTFGDLLRSLDPPSGFASPESVVMSREGVIVVNYERGHIAA 519
AELGLV+SGSQ GP L+H+ GDLLR+L+ P P+ + SREG V+ YE G
Sbjct: 2706 CAELGLVLSGSQEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGLFCT 2765
Query: 520 FTMNGNRLRHESHNDNLQ 537
F++NG +DN++
Sbjct: 2766 FSVNGKLQATMETDDNIR 2783
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 80/103 (77%)
Query: 8 QYPVFPEFFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGA 67
Q+ F Y + + I GR+YNDLNQYPVFPWV+TNY+S+ELDL+L TN+RDLSKPIGA
Sbjct: 2216 QHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGA 2275
Query: 68 LNPSRMAYFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
LNP R A+F ERY SWE + + FHYGTHYST +VL WL+R+
Sbjct: 2276 LNPKRAAFFAERYESWEDDQVPKFHYGTHYSTASFVLAWLLRI 2318
>sp|Q9ESE1|LRBA_MOUSE Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus
musculus GN=Lrba PE=1 SV=1
Length = 2856
Score = 262 bits (669), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 136/306 (44%), Positives = 188/306 (61%), Gaps = 36/306 (11%)
Query: 226 SPMMFS-TVLDDVCMSLKFPSNSPICHVTANTYVTLHMPSVVTVTANHQFAINRWN--PD 282
SP+MF+ DV M LKFPSNSP+ HV ANT L MP+V+TVTAN FA+N+W+ P
Sbjct: 2489 SPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLAMPAVITVTANRLFAVNKWHNLPA 2548
Query: 283 YAASIQSPSYAETPGSPPGNLPLTLDPILTHPTSNNNAPVPKRHLGDNFSQKLRVRHNCF 342
+ ++Q Y LP+ +DP++ T + +R + D Q ++V CF
Sbjct: 2549 HQGAVQDQPY---------QLPVEIDPLIACGTGTH-----RRQVTDLLDQSIQVHSQCF 2594
Query: 343 VTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLSR 402
V T D+R++L CGFWD SFRV+STD T +++Q++FGH+ VVTCL+R
Sbjct: 2595 VITSDNRYILVCGFWDKSFRVYSTD---------------TGKLIQVVFGHWDVVTCLAR 2639
Query: 403 SECNITADCFIASGSADCTVLLWHWNARTQSIVGET---DTPTPRATLTGHEQPVTSVAI 459
SE I +C+I SGS D T+LLW+WN ++ I G+ +T TPRA LTGH+ +T A+
Sbjct: 2640 SESYIGGNCYILSGSRDATLLLWYWNGKSSGI-GDNPGGETATPRAILTGHDYEITCAAV 2698
Query: 460 SAELGLVVSGSQLGPVLVHTTFGDLLRSLDPPSGFASPESVVMSREGVIVVNYERGHIAA 519
AELGLV+SGSQ GP L+H+ GDLLR+L+ P P+ + SREG V+ YE G
Sbjct: 2699 CAELGLVLSGSQEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGCFCT 2758
Query: 520 FTMNGN 525
F++NG
Sbjct: 2759 FSVNGK 2764
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 80/103 (77%)
Query: 8 QYPVFPEFFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGA 67
Q+ F Y + + I GR+YNDLNQYPVFPWV+TNY+S+ELDL+L +N+RDLSKPIGA
Sbjct: 2209 QHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGA 2268
Query: 68 LNPSRMAYFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
LNP R A+F ER+ SWE + + FHYGTHYST +VL WL+R+
Sbjct: 2269 LNPKRAAFFAERFESWEDDQVPKFHYGTHYSTASFVLAWLLRI 2311
>sp|A8XSV3|NBEA_CAEBR Putative neurobeachin homolog OS=Caenorhabditis briggsae GN=sel-2
PE=3 SV=1
Length = 2531
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 192/314 (61%), Gaps = 27/314 (8%)
Query: 221 SLRIMSPMMFSTVLDDVCMSLKFPSNSPICHVTANTYVTLHMPSVVTVTANHQFAINRWN 280
S+ M+P MF DD+CM +K+ SNSP+ ++ ANT+ L P+VV V N F++N+W+
Sbjct: 2132 SIMTMAPTMFRRHDDDLCMMMKYISNSPVVYLAANTFHQLPHPTVVGVAQNLVFSLNKWD 2191
Query: 281 PDYA-ASIQSPSYAETPGSPPGN--LPLTLDPILTHPTSNNNAPVPKRHLGDNFSQKLRV 337
Y+ S Q + + P + G LPLT DP L T+ + P+ +RHLGD F Q+L+V
Sbjct: 2192 NSYSYGSTQRSALSMDPSNVEGQVALPLTADPQLA--TAASTTPIARRHLGDAFDQRLQV 2249
Query: 338 RHNCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVV 397
+ + FVTT DS+++ ACG+ D SFR+ TD+ R + Q ++GH VV
Sbjct: 2250 QCSNFVTTTDSKYIFACGYPDYSFRIVDTDSGR---------------VRQAVYGHGDVV 2294
Query: 398 TCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGE----TDTPTPRATLTGHEQP 453
TC++RSE ++ +DC++ +GS DCTV+LWHWN T I GE + P+PR+ LTGHE
Sbjct: 2295 TCIARSETSLFSDCYVVTGSMDCTVVLWHWNGTTGFIAGEYNQPGEVPSPRSILTGHEAS 2354
Query: 454 VTSVAISAELGLVVSGSQLGPVLVHTTFGDLLRSLDPPSGFASPESVVMSREGVIVVNYE 513
++++ +SAE GLVVSG + G +L+HTT DLLR + G + + MSRE +++V ++
Sbjct: 2355 ISALCVSAEHGLVVSGCEDGVILIHTTASDLLRRI---RGHGTVTQLSMSRECILLVLFD 2411
Query: 514 RGHIAAFTMNGNRL 527
+ ++ +L
Sbjct: 2412 SKRMTTYSSTARKL 2425
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 75/96 (78%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + + GRT+NDL+QYPVFPW+LTNY S LDLS+++N+RDLSKPIGALN +R
Sbjct: 1864 FDYLMFLNTVAGRTFNDLSQYPVFPWILTNYTSDTLDLSVASNFRDLSKPIGALNEARRK 1923
Query: 75 YFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
+F +RY SW+ + + FHYGTHYST + LNWL+R+
Sbjct: 1924 FFTDRYASWDDDLVPAFHYGTHYSTPAFTLNWLLRL 1959
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 120 SIQSPSYAETPGSPPGN--LPLTLDPILTHPTSNNNAPVPKRHLGDNFSQKLRVR 172
S Q + + P + G LPLT DP L T+ + P+ +RHLGD F Q+L+V+
Sbjct: 2198 STQRSALSMDPSNVEGQVALPLTADPQLA--TAASTTPIARRHLGDAFDQRLQVQ 2250
>sp|Q19317|NBEA_CAEEL Putative neurobeachin homolog OS=Caenorhabditis elegans GN=sel-2 PE=2
SV=3
Length = 2507
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 190/324 (58%), Gaps = 27/324 (8%)
Query: 221 SLRIMSPMMFSTVLDDVCMSLKFPSNSPICHVTANTYVTLHMPSVVTVTANHQFAINRWN 280
S+ M+P MF +D+CM +K+ SNSP+ ++ ANT+ L P+VV V N F++N+W+
Sbjct: 2108 SIMSMAPTMFRRHDEDLCMMMKYISNSPVVYLAANTFHQLPQPTVVGVAQNLVFSLNKWD 2167
Query: 281 PDYA-ASIQSPSYAETPGSPPGN--LPLTLDPILTHPTSNNNAPVPKRHLGDNFSQKLRV 337
Y+ + Q + + P + G LPLT D L S PV +RHLGD F Q+L V
Sbjct: 2168 NSYSYGASQRSALSMDPSNAEGQVSLPLTADAQLASAASTT--PVARRHLGDAFDQRLTV 2225
Query: 338 RHNCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVV 397
+ + FVTT DS+F+ ACG+ D SFR+ TD+ R + Q ++GH VV
Sbjct: 2226 QCSNFVTTTDSKFIFACGYPDYSFRIVDTDSGR---------------VRQAVYGHGDVV 2270
Query: 398 TCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGE----TDTPTPRATLTGHEQP 453
TC++RSE ++ +DC++ +GS DCTV+LWHWN T I GE + P+PR+ LTGHE
Sbjct: 2271 TCIARSETSLFSDCYVVTGSMDCTVVLWHWNGTTGFIAGEYNQPGEVPSPRSILTGHEAS 2330
Query: 454 VTSVAISAELGLVVSGSQLGPVLVHTTFGDLLRSLDPPSGFASPESVVMSREGVIVVNYE 513
++++ +SAE GLVVSG + G +L+HTT DLLR + G + MSRE +++ ++
Sbjct: 2331 ISALCVSAEHGLVVSGCEDGVILIHTTSSDLLRRI---RGHGIVTQLSMSRECILLSLFD 2387
Query: 514 RGHIAAFTMNGNRLRHESHNDNLQ 537
+ ++ +L +D ++
Sbjct: 2388 SKRMVTYSATAKKLDEVLVDDKIE 2411
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 75/96 (78%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + + GRT+NDL+QYPVFPW+LTNY S LDLS+++N+RDLSKPIGAL+ +R
Sbjct: 1840 FDYLMFLNTVAGRTFNDLSQYPVFPWILTNYTSDTLDLSVASNFRDLSKPIGALSEARRK 1899
Query: 75 YFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
+F +RY SW+ + + FHYGTHYST + LNWL+RV
Sbjct: 1900 FFNDRYTSWDDDQVPAFHYGTHYSTPAFTLNWLLRV 1935
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 101 VYVLN-WLVRVPIGALNPSPSIQSPSYAETPGSPPGNLPLTLDPILTHPTSNNNAPVPKR 159
V+ LN W GA S PS AE S LPLT D L S PV +R
Sbjct: 2160 VFSLNKWDNSYSYGASQRSALSMDPSNAEGQVS----LPLTADAQLASAASTT--PVARR 2213
Query: 160 HLGDNFSQKLRVR 172
HLGD F Q+L V+
Sbjct: 2214 HLGDAFDQRLTVQ 2226
>sp|Q55DM1|LVSA_DICDI BEACH domain-containing protein lvsA OS=Dictyostelium discoideum
GN=lvsA PE=4 SV=2
Length = 3619
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 69/103 (66%), Gaps = 7/103 (6%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + + GR+YNDL QYPVFPWVL++Y+S+ELD+ YRDLSKP+GAL SR
Sbjct: 2995 FQYLMHLNTLAGRSYNDLTQYPVFPWVLSDYESEELDIDDPKVYRDLSKPMGALEESRAQ 3054
Query: 75 YFEERYNSWEHE-------NIKPFHYGTHYSTGVYVLNWLVRV 110
F ER+ +W+ + + FHYGTHYS+ VL +L+R+
Sbjct: 3055 KFRERFENWDDQEPNEHGHKVPKFHYGTHYSSAAIVLYYLIRL 3097
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 20/109 (18%)
Query: 379 YGVVTSRIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGET 438
Y + + + + GH G +TC+S S I SGS D T ++W N
Sbjct: 3376 YNLKRFSLAKRLSGHTGSITCVSASR----PYSIIVSGSDDRTCIIWDLNRLCYV----- 3426
Query: 439 DTPTPRATLTGHEQPVTSVAISAELGLVV--SGSQLGPVLVHTTFGDLL 485
+L HE P++ + I G +V SG+ + V+T G+LL
Sbjct: 3427 ------RSLDAHEGPISCIGIHDTTGEIVVCSGTTIS---VYTVNGELL 3466
>sp|P25356|BPH1_YEAST Beige protein homolog 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=BPH1 PE=4 SV=2
Length = 2167
Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/99 (49%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F+Y + I ++ GR++NDL QYPVFPWV+ +Y+S LDL YRDLSKP+GA + R
Sbjct: 1568 FYYLLSINILAGRSFNDLTQYPVFPWVIADYESNVLDLENPKTYRDLSKPMGAQSEKRKL 1627
Query: 75 YFEERYN---SWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
F ERY S E+ + PFHYGTHYS+ + V ++L+R+
Sbjct: 1628 QFIERYEALASLENADSAPFHYGTHYSSAMIVSSYLIRL 1666
>sp|Q54U63|LVSC_DICDI BEACH domain-containing protein lvsC OS=Dictyostelium discoideum
GN=lvsC PE=4 SV=2
Length = 2491
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 68/96 (70%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + I GRTYNDL QYPVFPWV+ +Y S LDL+ + +RDLSKPIGALN R+
Sbjct: 1851 FDYLMTLNTIAGRTYNDLTQYPVFPWVIADYTSPVLDLNKAETFRDLSKPIGALNEKRLE 1910
Query: 75 YFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
F++RY S++ I F+YG+HYS+ VL +L+R+
Sbjct: 1911 IFKDRYESFDDPVIPKFYYGSHYSSAGIVLFYLIRL 1946
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 37/241 (15%)
Query: 292 YAETPGSPPGNLPLTLDPILTHPTSNNNAPVPKRHLGDNFSQKLRVRHNCFVTTVDSRFL 351
+ TP LDP + KR +G F+ + + NCF T D R++
Sbjct: 2184 FPSTPNDKISPFTFELDP----------SSTTKRRIGLPFANDVTISPNCFAITSDGRYV 2233
Query: 352 LACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLSRSECNITADC 411
++C WDNSF++ D+A +++Q + H VTCLS + T
Sbjct: 2234 ISCAHWDNSFKLSFVDSA---------------KLIQSVVKHKDTVTCLSLASDGQT--- 2275
Query: 412 FIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQ 471
+ +GS D TV++W A T P L GH+ +T V ++ L + +SGS+
Sbjct: 2276 -LITGSKDTTVMVWRI-ATTNKSGAPKFNDVPDHILYGHDDEITCVDVNVGLDISISGSK 2333
Query: 472 LGPVLVHT-TFGDLLRSLDPPSGFASPESVV-MSREGVIVVNYERGH--IAAFTMNGNRL 527
G ++H G+ +RS+ P SP S++ +S +G IV+ Y + I +++NG L
Sbjct: 2334 DGTCIIHNLKHGEYVRSIYLPR--QSPISLIAISNQGYIVI-YSQADLMIYLYSINGGLL 2390
Query: 528 R 528
+
Sbjct: 2391 K 2391
>sp|Q54PP7|LVSF_DICDI BEACH domain-containing protein lvsF OS=Dictyostelium discoideum
GN=lvsF PE=4 SV=1
Length = 1154
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 8 QYPVFPEFFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGA 67
Q + + Y + + + GRT+NDL QYPVFPW++ +Y S LDL+ + +RDLSKPIGA
Sbjct: 405 QNGIISNYDYLLYLNNLAGRTFNDLTQYPVFPWIIADYQSTTLDLNRNETFRDLSKPIGA 464
Query: 68 LNPSRMAYFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVR 109
LNP+R+A F++RY+ + K F YGTHYST YVL +LVR
Sbjct: 465 LNPTRLATFQDRYHQIPDDQPK-FLYGTHYSTPAYVLYFLVR 505
Score = 40.0 bits (92), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 342 FVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLS 401
F + D ++++ G WDN+ V+S N I Y + GH V+CL
Sbjct: 908 FQLSKDEKYII-IGSWDNNIYVYSVGNGSI------SYSIP---------GHSDAVSCLK 951
Query: 402 RSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISA 461
NI + SGS D +V +W + ++ + TP A + + S+ IS+
Sbjct: 952 LHNNNI-----LVSGSWDSSVKVWRTHRQSNGAISIEKTPI--ADFVDSDTEIRSIDISS 1004
Query: 462 ELGLVVSGSQLGPVLVHTTFGDLL 485
+ +GS G + F DLL
Sbjct: 1005 NGTIFCAGSSDG----YLYFYDLL 1024
>sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus
GN=Wdfy3 PE=1 SV=1
Length = 3508
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + + GR+YNDL QYPVFPW+L++YDS+E+DL+ +R+L+KP+GA R+A
Sbjct: 2688 FQYLMHLNTLAGRSYNDLMQYPVFPWILSDYDSEEVDLTNPKTFRNLAKPMGAQTDERLA 2747
Query: 75 YFEERYNSWEHENIK--PFHYGTHYSTGVYVLNWLVRV 110
+++RY WE N + +HYGTHYS+ + V ++LVR+
Sbjct: 2748 QYKKRYKDWEDPNGETPAYHYGTHYSSAMIVASYLVRM 2785
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 386 IVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPRA 445
+ Q + GH VTC + S A I SGS D T ++W N +
Sbjct: 3101 LKQALLGHTDTVTCATAS----LAYHIIVSGSRDRTCIIWDLNKLS-----------FLT 3145
Query: 446 TLTGHEQPVTSVAISAELGLVVS 468
L GH PV+++ I+ G +VS
Sbjct: 3146 QLRGHRAPVSALCINELTGDIVS 3168
>sp|Q6ZNJ1|NBEL2_HUMAN Neurobeachin-like protein 2 OS=Homo sapiens GN=NBEAL2 PE=1 SV=2
Length = 2754
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + I GRTYNDL+QYPVFPWVL +Y S LDLS +RDLSKPIG +NP
Sbjct: 2076 FEYLMQLNTIAGRTYNDLSQYPVFPWVLQDYVSPTLDLSNPAVFRDLSKPIGVVNPKHAQ 2135
Query: 75 YFEERYNSWEH--ENIKPFHYGTHYSTGVYVLNWLVRV 110
E+Y S+E I FHYGTHYS V+++L+RV
Sbjct: 2136 LVREKYESFEDPAGTIDKFHYGTHYSNAAGVMHYLIRV 2173
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 24/178 (13%)
Query: 337 VRHNCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGV 396
V D + L + G WD S RV + +++ + H VVT
Sbjct: 2460 VSGQALAVAPDGKLLFSGGHWDGSLRVTALPRGKLLSQLSCHLDVVT------------- 2506
Query: 397 VTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTS 456
CL+ C I ++ SGS D T ++W + VG P P L GH V+
Sbjct: 2507 --CLALDTCGI----YLISGSRDTTCMVWRLLHQGGLSVGLA--PKPVQVLYGHGAAVSC 2558
Query: 457 VAISAELGLVVSGSQLGPVLVHTT-FGDLLRSLDPPSG-FASPE-SVVMSREGVIVVN 511
VAIS EL + VSGS+ G V++HT G + +L P F P + + EG IVV
Sbjct: 2559 VAISTELDMAVSGSEDGTVIIHTVRRGQFVAALRPLGATFPGPIFHLALGSEGQIVVQ 2616
>sp|Q6ZQA0|NBEL2_MOUSE Neurobeachin-like protein 2 OS=Mus musculus GN=Nbeal2 PE=2 SV=2
Length = 2742
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + I GRTYNDL+QYPVFPWVL +Y S LDLS +RDLSKPIG +NP
Sbjct: 2064 FEYLMQLNTIAGRTYNDLSQYPVFPWVLQDYVSPVLDLSNPAVFRDLSKPIGVVNPKHAQ 2123
Query: 75 YFEERYNSWEH--ENIKPFHYGTHYSTGVYVLNWLVRV 110
E+Y S+E I FHYGTHYS V+++L+RV
Sbjct: 2124 LVREKYESFEDPAGTIDKFHYGTHYSNAAGVMHYLIRV 2161
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 337 VRHNCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGV 396
V D + L + G WD S RV S R++ + SR H +
Sbjct: 2448 VSAQALAVAPDGKLLFSGGHWDGSLRVTSLPRGRLLNQL--------SR-------HLDI 2492
Query: 397 VTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTS 456
VTCL+ C I ++ SGS D T ++W QS + P P L GH V+
Sbjct: 2493 VTCLALDTCGI----YLISGSRDTTCMVWRL--LQQSGLSAGLAPKPVQVLYGHVAAVSC 2546
Query: 457 VAISAELGLVVSGSQLGPVLVHTT-FGDLLRSLDPPSG-FASPES-VVMSREGVIVVN 511
VAIS EL + VSGS+ G V++HT G + +L PP P S + + EG IVV
Sbjct: 2547 VAISTELDMAVSGSEDGTVIIHTVRRGQFVAALRPPGATLPGPISHLALGAEGQIVVQ 2604
>sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens
GN=WDFY3 PE=1 SV=2
Length = 3526
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + + GR+YNDL QYPVFPW+L +YDS+E+DL+ +R+L+KP+GA R+A
Sbjct: 2706 FQYLMHLNTLAGRSYNDLMQYPVFPWILADYDSEEVDLTNPKTFRNLAKPMGAQTDERLA 2765
Query: 75 YFEERYNSWEHENIK--PFHYGTHYSTGVYVLNWLVRV 110
+++RY WE N + +HYGTHYS+ + V ++LVR+
Sbjct: 2766 QYKKRYKDWEDPNGETPAYHYGTHYSSAMIVASYLVRM 2803
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Query: 383 TSRIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPT 442
T + Q + GH VTC + S A I SGS D T ++W N +
Sbjct: 3116 TVTLKQALLGHTDTVTCATAS----LAYHIIVSGSRDRTCIIWDLNKLS----------- 3160
Query: 443 PRATLTGHEQPVTSVAISAELGLVVS 468
L GH PV+++ I+ G +VS
Sbjct: 3161 FLTQLRGHRAPVSALCINELTGDIVS 3186
>sp|Q7LKZ7|BPH1_SCHPO Beige protein homolog 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=lvs1 PE=1 SV=2
Length = 2609
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y ++ + GRTYNDL QYPVFPWV+ +Y SKELDL+ YR+ KP+GA +P R +
Sbjct: 1930 FNYLQIVNTLAGRTYNDLTQYPVFPWVIADYTSKELDLNNPKTYRNFCKPMGAQHPERES 1989
Query: 75 YFEERYN---SWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
F ERY+ +PFHYGTHYS+ + V ++L+R+
Sbjct: 1990 QFNERYDLLLGLNDSQQQPFHYGTHYSSAMIVCSYLIRL 2028
>sp|E7FAW3|NBEL2_DANRE Neurobeachin-like protein 2 OS=Danio rerio GN=nbeal2 PE=1 SV=1
Length = 2801
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + I GRTYNDL+QYPVFPWVL +Y S ELDL +RDLSKPIG +NP
Sbjct: 2122 FEYLMQLNTIAGRTYNDLSQYPVFPWVLCDYTSAELDLDDPAVFRDLSKPIGVVNPRHAQ 2181
Query: 75 YFEERYNSWEH--ENIKPFHYGTHYSTGVYVLNWLVR 109
E+Y S+E I FHYGTHYS V+++++R
Sbjct: 2182 NVREKYESFEDPTGTIDKFHYGTHYSNAAGVMHYMIR 2218
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 127/285 (44%), Gaps = 54/285 (18%)
Query: 265 VVTVTANHQFAINRWNPDYAASIQSPSYAETPGSPPGNLPLTLDPILTHPTSNNNAPVPK 324
+VTV+AN + W P Y +I + T DP +++P + +
Sbjct: 2452 LVTVSANGMIGTHSWLP-YDKNIAN------------YFTFTRDPSVSNPKT-------Q 2491
Query: 325 RHLGDNFSQKLRVRHNCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTS 384
R L FS + + V + D R L + G WD S RV A++V
Sbjct: 2492 RFLSGPFSPGVEMGSQVLVVSSDGRLLFSGGHWDCSLRVTMLGKAKLV-----------G 2540
Query: 385 RIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPR 444
RI + H VVTCL+ C I ++ SGS D T ++W Q +P P
Sbjct: 2541 RICR----HIDVVTCLALDLCGI----YLISGSRDTTCMVWQ--VLQQGGFSSGLSPRPI 2590
Query: 445 ATLTGHEQPVTSVAISAELGLVVSGSQLGPVLVHTT-FGDLLRSLDPP--SGFASP-ESV 500
L GH+Q VT VAIS EL + +SGS+ G V+VH+ G L +L PP + ++P +
Sbjct: 2591 QVLCGHDQEVTCVAISTELDMAISGSKDGTVIVHSVRRGQYLWTLRPPCENCVSAPVAQL 2650
Query: 501 VMSREGVIVVN---------YERGHIAAFTMNGNRLRHESHNDNL 536
+ EG IV+ ER + +++NG L E+ ++ +
Sbjct: 2651 EVGMEGHIVMQTVLEGRSAGKERYALHVYSVNGTLLASETLDEKI 2695
>sp|Q6ZS30|NBEL1_HUMAN Neurobeachin-like protein 1 OS=Homo sapiens GN=NBEAL1 PE=2 SV=3
Length = 2694
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y I I + GRTYNDL QYPVFPW+L +Y S+ELDL+ +RDLSKPIG +N
Sbjct: 2015 FDYLIQINTMAGRTYNDLAQYPVFPWILQDYTSEELDLNNPAVFRDLSKPIGVVNEKNAK 2074
Query: 75 YFEERYNSWEH--ENIKPFHYGTHYSTGVYVLNWLVRV 110
E+Y ++E I FHYGTHYS V+++L+RV
Sbjct: 2075 AMREKYENFEDPMGTIDKFHYGTHYSNSAGVMHYLIRV 2112
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 321 PVPKRHLGDNFSQKLRVRHNCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYG 380
P +R + +F+ L + FV + D++ L + G+WDNS +V S +I+
Sbjct: 2383 PKTQRSINGSFAPGLEITSKLFVVSHDAKLLFSAGYWDNSIQVMSLTKGKII-------- 2434
Query: 381 VVTSRIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDT 440
S I++ H +VTCL+ C I + SGS D T ++W + VG
Sbjct: 2435 ---SHIIR----HMDIVTCLATDYCGI----HLISGSRDTTCMIWQITQQGGVPVGLASK 2483
Query: 441 PTPRATLTGHEQPVTSVAISAELGLVVSGSQLGPVLVHT-TFGDLLRSLDPP---SGFAS 496
P L GH V SV IS EL + VSGS+ G V++HT G +R+L PP S F +
Sbjct: 2484 PF--QILYGHTNEVLSVGISTELDMAVSGSRDGTVIIHTIQKGQYMRTLRPPCESSLFLT 2541
Query: 497 PESVVMSREGVIVVN---------YERGHIAAFTMNGNRL 527
++ +S EG IVV ++ + F++NG L
Sbjct: 2542 IPNLAISWEGHIVVYSSTEEKTTLKDKNALHLFSINGKYL 2581
>sp|Q55AV3|LVSD_DICDI BEACH domain-containing protein lvsD OS=Dictyostelium discoideum
GN=lvsD PE=4 SV=2
Length = 2967
Score = 102 bits (254), Expect = 7e-21, Method: Composition-based stats.
Identities = 49/95 (51%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + I GRTYNDLNQYPVFPW++ + S L+++ + YRDLSKPIGALNP+R+
Sbjct: 2225 FEYLMTLNTIAGRTYNDLNQYPVFPWIIGDNSSNTLNINDQSIYRDLSKPIGALNPTRLE 2284
Query: 75 YFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVR 109
F ER+ E I F YGTHYS+ V+ +L+R
Sbjct: 2285 LFMERWTQCPAE-IPAFMYGTHYSSSGSVMFFLMR 2318
Score = 35.8 bits (81), Expect = 0.79, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 347 DSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIV-QIIFGHYGVVTCLSRSEC 405
+SR LL G D + + + +++V H +T + + G GV L +
Sbjct: 2628 NSRVLLTSGKCDYTLHIVHGEGSKLVTGSINHKSPITCIVYDEYQCGRLGVGGVLIEQKV 2687
Query: 406 NITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGL 465
I +GS D T ++W + ++QS + + P L GH +T +AI+ +
Sbjct: 2688 -------IVTGSDDSTAIVWEYE-QSQS---DHHSIKPIHILRGHNFGITCIAINKANDI 2736
Query: 466 VVSGSQLGPVLVHT-TFGDLLRSLDPPS 492
++ S+ G V VH+ G +S+ P+
Sbjct: 2737 CLTASKDGKVNVHSLKKGTFFKSIQHPN 2764
>sp|Q86JF2|LVSB_DICDI BEACH domain-containing protein lvsB OS=Dictyostelium discoideum
GN=lvsB PE=4 SV=1
Length = 4118
Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 68/103 (66%)
Query: 8 QYPVFPEFFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGA 67
Q + F Y + + + GR++NDL QYP+FP++L +Y+S+ LDL +RD +KP+GA
Sbjct: 3507 QSGLISNFEYLMHLNTLAGRSFNDLTQYPIFPFILRDYESEVLDLENPNTFRDFTKPMGA 3566
Query: 68 LNPSRMAYFEERYNSWEHENIKPFHYGTHYSTGVYVLNWLVRV 110
+P R+ F E+YN N KP+HYG+HYS VL++LVR+
Sbjct: 3567 QDPKRLEKFIEKYNDLLEMNEKPYHYGSHYSNIGSVLHFLVRL 3609
Score = 35.0 bits (79), Expect = 1.4, Method: Composition-based stats.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 40/208 (19%)
Query: 284 AASIQSPSYAETPGS------PPGN----LPLTLDPILTHPTS-------NNNAPVPKRH 326
AA Q SY +TP P N + LT D I T P +P+
Sbjct: 3759 AAVAQIHSYGQTPKQIFTKPHPKKNWSKTIRLTQDSIFTKPERLTSYIMFQYRSPIGSIT 3818
Query: 327 LGDNFSQKLRVRHNCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRI 386
+ ++ S + + + D+ ++ G WD + RV S D +++ II V+ I
Sbjct: 3819 IAND-SSPIHLTPQRILFFPDNNKSISWGHWDQNLRVNSIDTGKVLSII----EVLNDDI 3873
Query: 387 VQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGET---DTPTP 443
+ G +T R F+ G+A TV +W +I+ D +
Sbjct: 3874 I------CGDITKNGR--------LFVTGGTAG-TVKVWKRCNNDGTIMTRKERGDNLSL 3918
Query: 444 RATLTGHEQPVTSVAISAELGLVVSGSQ 471
+TL GH + V +S E ++VSGS+
Sbjct: 3919 WSTLYGHTNSILCVTVSQEYSIIVSGSK 3946
>sp|Q54RQ8|LVSE_DICDI BEACH domain-containing protein lvsE OS=Dictyostelium discoideum
GN=lvsE PE=4 SV=1
Length = 2192
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + I GRTYND++QYPVFP ++++Y S+ LDL+ S ++RDLSKP+GALN R+
Sbjct: 1527 FEYLMSLNTIAGRTYNDISQYPVFPQIISDYKSEFLDLNDSRSFRDLSKPMGALNQQRLD 1586
Query: 75 YFEERYNSWEHEN---IKPFHYGTHYSTGVYVLNWLVRV 110
+RY S + + PF YG+HYS V + VR+
Sbjct: 1587 TLIKRYQSMQSAQDPTMPPFLYGSHYSNFGIVAYYQVRL 1625
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 54/299 (18%)
Query: 241 LKFPSNSPICHVTANTYVTLHMPSVVTVTANHQFAINRWNPDYAASIQSPSYAETPGSPP 300
LK S+ P+ H+++ + VV V + A+N++ P SP
Sbjct: 1861 LKTKSSLPLVHISSCQDSDI----VVLVYRDGVMAVNQFVP----------------SPN 1900
Query: 301 GNLPLTLDPILTHPTSNNNAPVPKRHLGDNF-SQKLRVRHNCFVTTVDSRFLLACGFWDN 359
GNLP T D T T ++ + F S + NCF T D +F+ +C WD+
Sbjct: 1901 GNLPFTFDIDKTLST------YKEKQIDTLFMSDSVTCISNCFAITPDGKFMFSCATWDS 1954
Query: 360 SFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLSRSECNITADCFIASGSAD 419
F+ + N R+ ++ H+ +VTC+S + A+ S+D
Sbjct: 1955 VFKCSNIQNGRVHRLYRDF--------------HHDMVTCISLG----SNGKHFATASSD 1996
Query: 420 CTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQLGPVLVHT 479
T+L+ WN I P+ R L H++PV + I+ E L+ SGS +++H+
Sbjct: 1997 TTILV--WNDVDHLIKDSKAKPSYR--LCSHDEPVHCLDINEEWDLIASGSMDKKLILHS 2052
Query: 480 T-FGDLLRSLDPPSGFASPESVVMSREGVIVVNY-ERGHIAAFTMNGNRLRHESHNDNL 536
G RS+ + E V +S G +++Y + + NG L+ + ++ +
Sbjct: 2053 LGKGHYQRSMIHN---GAVEIVKISTVGQTIISYCSMSFLYVHSFNGKLLKIQQSDEKI 2108
>sp|O35242|FAN_MOUSE Protein FAN OS=Mus musculus GN=Nsmaf PE=2 SV=2
Length = 920
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 5/97 (5%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
+ Y + + + R+ NDL+QYPVFPW++++Y S ELDLS +RDLSKP+GALN R+
Sbjct: 313 YQYLLHLNNLADRSCNDLSQYPVFPWIISDYSSPELDLSNPATFRDLSKPVGALNAERLE 372
Query: 75 YFEERYNSWEHENIKP-FHYGTHYSTGVYVLNWLVRV 110
RY E +P F YG+HYS+ YVL +LVR+
Sbjct: 373 RLLTRY----QEMPEPRFMYGSHYSSPGYVLFYLVRI 405
>sp|Q92636|FAN_HUMAN Protein FAN OS=Homo sapiens GN=NSMAF PE=1 SV=2
Length = 917
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
+ Y + + + R+ NDL+QYPVFPW++ +Y S ELDLS +RDLSKP+GALN R+
Sbjct: 313 YQYLLHLNNLADRSCNDLSQYPVFPWIIHDYSSSELDLSNPGTFRDLSKPVGALNKERLE 372
Query: 75 YFEERYNSWEHENIKP-FHYGTHYSTGVYVLNWLVRV 110
RY E +P F YG+HYS+ YVL +LVR+
Sbjct: 373 RLLTRY----QEMPEPKFMYGSHYSSPGYVLFYLVRI 405
>sp|Q9TTK4|LYST_BOVIN Lysosomal-trafficking regulator OS=Bos taurus GN=LYST PE=1 SV=1
Length = 3796
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 12/109 (11%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSR-- 72
F Y + GR++NDL QYPVFP++L +Y S+ LDLS + YR+LSKPI +
Sbjct: 3138 FEYLTHLNKHAGRSFNDLMQYPVFPFILADYVSETLDLSDPSVYRNLSKPIAVQYKEKED 3197
Query: 73 -----MAYFEERYNSWEHEN-----IKPFHYGTHYSTGVYVLNWLVRVP 111
Y EE Y E+ ++P+HYG+HYS VL++LVR+P
Sbjct: 3198 RYVDTYKYLEEEYRKGAREDDPMPPVQPYHYGSHYSNSGTVLHFLVRMP 3246
>sp|Q6ZS81|WDFY4_HUMAN WD repeat- and FYVE domain-containing protein 4 OS=Homo sapiens
GN=WDFY4 PE=1 SV=3
Length = 3184
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSRMA 74
F Y + + GRT ND QYPVFPWVL +Y S+ L+L+ +RDLSKP+GA R
Sbjct: 2550 FEYLMYLNTAAGRTCNDYMQYPVFPWVLADYTSETLNLANPKIFRDLSKPMGAQTKERKL 2609
Query: 75 YFEERYNSWEH---ENIKPFHYGTHYSTGVYVLNWLVRVP 111
F +R+ E + HY THYS+ + V ++LVR+P
Sbjct: 2610 KFIQRFKEVEKTEGDMTVQCHYYTHYSSAIIVASYLVRMP 2649
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 385 RIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPR 444
R+ Q ++GH VTCL+ S + SGS DCT +LW + D T
Sbjct: 2973 RLRQALYGHTQAVTCLAAS----VTFSLLVSGSQDCTCILW-----------DLDHLTHV 3017
Query: 445 ATLTGHEQPVTSVAISAELGLVVS 468
L H + ++++ IS G +VS
Sbjct: 3018 TRLPAHREGISAITISDVSGTIVS 3041
>sp|P97412|LYST_MOUSE Lysosomal-trafficking regulator OS=Mus musculus GN=Lyst PE=1 SV=1
Length = 3788
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 12/109 (11%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSR-- 72
F Y + GR++NDL QYPVFP++L++Y S+ LDL+ + YR+LSKPI +
Sbjct: 3130 FEYLTHLNKHAGRSFNDLMQYPVFPFILSDYVSETLDLNDPSIYRNLSKPIAVQYKEKED 3189
Query: 73 -----MAYFEERYNSWEHEN-----IKPFHYGTHYSTGVYVLNWLVRVP 111
Y EE Y E+ ++P+HYG+HYS VL++LVR+P
Sbjct: 3190 RYVDTYKYLEEEYRKGAREDDPMPPVQPYHYGSHYSNSGTVLHFLVRMP 3238
>sp|Q99698|LYST_HUMAN Lysosomal-trafficking regulator OS=Homo sapiens GN=LYST PE=1 SV=3
Length = 3801
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 15 FFYFIVICLITGRTYNDLNQYPVFPWVLTNYDSKELDLSLSTNYRDLSKPIGALNPSR-- 72
F Y + GR++NDL QYPVFP++L +Y S+ LDL+ YR+LSKPI +
Sbjct: 3143 FEYLTHLNKHAGRSFNDLMQYPVFPFILADYVSETLDLNDLLIYRNLSKPIAVQYKEKED 3202
Query: 73 -----MAYFEERYNSWEHEN-----IKPFHYGTHYSTGVYVLNWLVRVP 111
Y EE Y E+ ++P+HYG+HYS VL++LVR+P
Sbjct: 3203 RYVDTYKYLEEEYRKGAREDDPMPPVQPYHYGSHYSNSGTVLHFLVRMP 3251
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 43/147 (29%)
Query: 349 RFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVT------------------------- 383
R +LA G +D + R+++ + V ++ GH VT
Sbjct: 283 RNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNYRT 342
Query: 384 SRIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTP 443
S + I+ GH V CL+ + SGSADCTV LWH++
Sbjct: 343 SECISILHGHTDSVLCLTFDST------LLVSGSADCTVKLWHFSG------------GK 384
Query: 444 RATLTGHEQPVTSVAISAELGLVVSGS 470
R TL GH PV SV I + GLV+SGS
Sbjct: 385 RITLRGHTGPVNSVRIIRDRGLVLSGS 411
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 19/100 (19%)
Query: 346 VDSRFLLACGFWDNSFRVFSTDNARIVQIIFGH----YGVVTSRIVQIIFGHYGVVTCLS 401
DSR L +C D + + + + + V +FGH + + + I H GVV
Sbjct: 443 ADSR-LFSCSL-DGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWE 500
Query: 402 RSECNIT-------------ADCFIASGSADCTVLLWHWN 428
EC T DC + SGS D + LW +N
Sbjct: 501 ACECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLWLFN 540
>sp|Q8SQS4|TAF5_ENCCU Transcription initiation factor TFIID subunit 5 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=TAF5 PE=1 SV=1
Length = 556
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 19/107 (17%)
Query: 353 ACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLSRSECNITADCF 412
A F NS +F+ + V++ + + T+ +V+I GH VTC+ S C F
Sbjct: 411 AVKFHPNSSYLFTGSSDHRVRM----HDISTASVVRIFCGHTDTVTCMDVSHCGK----F 462
Query: 413 IASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAI 459
+ASGS D TVLL W+ ++ ++G+ GHE V SV+
Sbjct: 463 LASGSKDRTVLL--WDIQSSKLLGK---------YVGHENTVFSVSF 498
>sp|Q9P7I3|MDV1_SCHPO Mitochondrial division protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mdv1 PE=3 SV=1
Length = 651
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 29/163 (17%)
Query: 317 NNNAPVPKRHLGDNFSQKLRVRHNCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIF 376
N + V + ++ N ++ + H+ ++T++D + + F +T + ++
Sbjct: 310 NTESSVNQNYIVGNLVKQFQA-HSEYITSLD---------FSHPFGTLATASTDKTVKVW 359
Query: 377 GHYGVVTSRIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHW--------N 428
GVV + + GH V+CL+ D FIA+GS D TV LW+ N
Sbjct: 360 DMAGVV---YLGSLKGHSDYVSCLA------IQDSFIATGSMDTTVRLWNLDNDVLHKDN 410
Query: 429 ARTQSIVGETDTPTPRAT--LTGHEQPVTSVAISAELGLVVSG 469
+S+ D P AT LT H PVT++A+S++ L+
Sbjct: 411 PVEESLNSPPDQPVDNATNVLTSHTAPVTALALSSDDVLITGA 453
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 66/160 (41%), Gaps = 35/160 (21%)
Query: 351 LLACGFWDNSFRVFSTDNARIVQIIFGHYGVV-TSRIVQ----IIFGHYGVVTCLSRSE- 404
LL G DN+ +V+S D+ + + GH G V TS+I Q I+ G + R+E
Sbjct: 270 LLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWRAED 329
Query: 405 ---------------CNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTG 449
C A+ + +GS DCT+ +W + +T TL G
Sbjct: 330 GFLLHTLQGHTSTVRCMAMANTTLVTGSRDCTLRVW-----------DIETGLHVRTLQG 378
Query: 450 HEQPVTSVAISAELGLVVSGSQLGPVLVHTTF-GDLLRSL 488
H+ V V +VVSG V + F G LR+L
Sbjct: 379 HQAAVRCVQFDG--NIVVSGGYDFTVKIWDAFSGKCLRTL 416
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 32/154 (20%)
Query: 336 RVRHNCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYG 395
R+ N F + DS+ +++C + ++V++ + V + R V+ + GH
Sbjct: 148 RLGINEFSWSSDSKLIVSC------------SDDKLVKV----FDVSSGRCVKTLKGHTN 191
Query: 396 VVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVT 455
V C C + IASGS D T+ +W AR + + ++ GHE PV+
Sbjct: 192 YVFCC----CFNPSGTLIASGSFDETIRIW--CARNGNTI---------FSIPGHEDPVS 236
Query: 456 SVAISAELGLVVSGSQLGPVLV-HTTFGDLLRSL 488
SV + + + SGS G V + +T G +++L
Sbjct: 237 SVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTL 270
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 412 FIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQ 471
+A+G DC V +W N P +LTGH P+ S+ ISA+ L+V+GSQ
Sbjct: 35 LLATGGDDCRVNVWSVNK-----------PNCVMSLTGHTTPIESLQISAKEELIVAGSQ 83
Query: 472 LGPVLV-HTTFGDLLRSL 488
G + V +LR+L
Sbjct: 84 SGSIRVWDLEAAKILRTL 101
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 27/145 (18%)
Query: 357 WDNSFR-VFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLSRSECNIT-ADCFIA 414
W + R V S + + ++I + +VTSR+ + + GH V C CN +
Sbjct: 137 WSSDSRCVVSASDDKTLKI----FEIVTSRMTKTLKGHNNYVFC-----CNFNPQSSLVV 187
Query: 415 SGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQLGP 474
SGS D +V +W + T TL H PV++V+ + + L+ SGS G
Sbjct: 188 SGSFDESVRIW-----------DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL 236
Query: 475 VLV-HTTFGDLLRSL----DPPSGF 494
V + T G +++L +PP F
Sbjct: 237 VRIWDTANGQCIKTLVDDENPPVAF 261
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 40/148 (27%)
Query: 351 LLACGFWDNSFRVFSTDNARIVQIIF---------------GHYGVVTS----------- 384
L+A G +D R++ T N + ++ + G Y + ++
Sbjct: 227 LIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFS 286
Query: 385 --RIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPT 442
+ ++ GH C+ + ++T +I SGS DC + + WN +T+ IV
Sbjct: 287 KGKTLKQYTGHENSKYCI-FANFSVTGGKWIISGSEDCKIYI--WNLQTREIV------- 336
Query: 443 PRATLTGHEQPVTSVAISAELGLVVSGS 470
L GH QPV + ++ SG+
Sbjct: 337 --QCLEGHTQPVLASDCHPVQNIIASGA 362
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 34/182 (18%)
Query: 311 LTHPTSNNNAPVPKRHLGDNFSQKLRVRHNCFVTTVDSRFLLACGFWDNSFRVFSTDNAR 370
L +SN N GD L +R CF + D + LLA G D R++ R
Sbjct: 236 LIDESSNENKDDNTTASGD-----LYIRSVCF--SPDGK-LLATGAEDKLIRIWDLSTKR 287
Query: 371 IVQIIFGHYGVVTS--------RIVQIIFGHYGVVTCLSRSECNITADC----------- 411
I++I+ GH + S R+V + L S+C++T
Sbjct: 288 IIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSP 347
Query: 412 ---FIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVS 468
IA+GS D TV + W++ T +V D+ GHE V SVA S + S
Sbjct: 348 DGKLIAAGSLDRTVRV--WDSTTGFLVERLDSGNENG--NGHEDSVYSVAFSNNGEQIAS 403
Query: 469 GS 470
GS
Sbjct: 404 GS 405
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 413 IASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQ 471
IASGS D TV LWH ++ T T GH+ V SV + + ++SGS+
Sbjct: 401 IASGSLDRTVKLWHLEGKSDK------KSTCEVTYIGHKDFVLSVCCTPDNEYILSGSK 453
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 34/182 (18%)
Query: 311 LTHPTSNNNAPVPKRHLGDNFSQKLRVRHNCFVTTVDSRFLLACGFWDNSFRVFSTDNAR 370
L +SN N GD L +R CF + D + LLA G D R++ R
Sbjct: 237 LIDESSNENKDDNTTASGD-----LYIRSVCF--SPDGK-LLATGAEDKLIRIWDLSTKR 288
Query: 371 IVQIIFGHYGVVTS--------RIVQIIFGHYGVVTCLSRSECNITADC----------- 411
I++I+ GH + S R+V + L S+C++T
Sbjct: 289 IIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSP 348
Query: 412 ---FIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVS 468
IA+GS D TV + W++ T +V D+ GHE V SVA S + S
Sbjct: 349 DGKLIAAGSLDRTVRV--WDSTTGFLVERLDSGNENG--NGHEDSVYSVAFSNNGEQIAS 404
Query: 469 GS 470
GS
Sbjct: 405 GS 406
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 413 IASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQ 471
IASGS D TV LWH ++ T T GH+ V SV + + ++SGS+
Sbjct: 402 IASGSLDRTVKLWHLEGKSDK------KSTCEVTYIGHKDFVLSVCCTPDNEYILSGSK 454
>sp|Q9FLX9|NLE1_ARATH Notchless protein homolog OS=Arabidopsis thaliana GN=NLE1 PE=2 SV=1
Length = 473
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 370 RIVQIIFGHYGVV----TSRIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLW 425
+++ I++ V +R Q I GH V C+S S +ASGS D TV LW
Sbjct: 81 KVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQ----LASGSGDTTVRLW 136
Query: 426 HWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQLGPV 475
+ T TP T GH+ V +VA S + +VSGS+ G +
Sbjct: 137 -----------DLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEI 175
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 40.0 bits (92), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 412 FIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQ 471
+A+G DC V LW N P +LTGH PV SV ++ L+V+GSQ
Sbjct: 35 LLATGGDDCRVNLWSIN-----------KPNCIMSLTGHTSPVESVRLNTPEELIVAGSQ 83
Query: 472 LGPVLV-HTTFGDLLRSL 488
G + V +LR+L
Sbjct: 84 SGSIRVWDLEAAKILRTL 101
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 412 FIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQ 471
+A+G DC V LW N P +LTGH PV SV ++ L+V+GSQ
Sbjct: 35 LLATGGDDCRVNLWSIN-----------KPNCIMSLTGHTSPVESVRLNTPEELIVAGSQ 83
Query: 472 LGPVLV-HTTFGDLLRSL 488
G + V +LR+L
Sbjct: 84 SGSIRVWDLEAAKILRTL 101
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 26/142 (18%)
Query: 363 VFSTDNARIVQI----IFGHYGVVTSRIVQIIFGHYGVVTCLSRSECNITA-DCFIASGS 417
+S+D++R+V + V + + ++ + GH V C CN I SGS
Sbjct: 90 AWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFC-----CNFNPPSNLIISGS 144
Query: 418 ADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQLGPVLV 477
D TV +W E T TL+ H PV++V + L+VSGS G +
Sbjct: 145 FDETVKIW-----------EVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRI 193
Query: 478 -HTTFGDLLRSL----DPPSGF 494
G L++L +PP F
Sbjct: 194 WDAASGQCLKTLVDDDNPPVSF 215
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 379 YGVVTSRIVQIIFGHYGVVTCLSRSECNIT-ADCFIASGSADCTVLLWHWNARTQSIVGE 437
Y V T ++ + + GH V C CN + SGS D +V +W + RT V
Sbjct: 148 YEVPTVKMAKTLKGHTNYVFC-----CNFNPQSSLVVSGSFDESVRIW--DVRTGMCV-- 198
Query: 438 TDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQLGPVLV-HTTFGDLLRSL----DPPS 492
TL H PV++V+ + + L+ SGS G V + T G +++L +PP
Sbjct: 199 -------KTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPV 251
Query: 493 GF 494
F
Sbjct: 252 AF 253
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 35/117 (29%)
Query: 385 RIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWH------------------ 426
+++ I GH ++ + S C F+ + SAD TV +W+
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGK----FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVN 125
Query: 427 ---WNARTQSIVGETDTPTPR----------ATLTGHEQPVTSVAISAELGLVVSGS 470
W+A ++SIV +D T + TL GH V + + LVVSGS
Sbjct: 126 DFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGS 182
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 26/142 (18%)
Query: 363 VFSTDNARIVQI----IFGHYGVVTSRIVQIIFGHYGVVTCLSRSECNITA-DCFIASGS 417
+S+D++R+V + + + + ++ + GH V C CN I SGS
Sbjct: 90 AWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFC-----CNFNPPSNLIISGS 144
Query: 418 ADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQLGPVLV 477
D TV +W E T TL+ H PV++V + L+VSGS G +
Sbjct: 145 FDETVKIW-----------EVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRI 193
Query: 478 -HTTFGDLLRSL----DPPSGF 494
G L++L +PP F
Sbjct: 194 WDAASGQCLKTLVDDDNPPVSF 215
>sp|O74319|TAF73_SCHPO Transcription initiation factor TFIID subunit taf73
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf73 PE=1 SV=1
Length = 642
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 394 YGVVTCLSRSECNITAD--CFIASGSADCTVLLWH-WNARTQSIVGETDTPTPRATLTGH 450
Y + LS C +D A G AD ++ L+ N Q +VG + P +++L GH
Sbjct: 343 YTMHNTLSAVNCAAFSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGH 402
Query: 451 EQPVTSVAISAELGLVVSGSQLG 473
+PV V+IS + ++S S+ G
Sbjct: 403 TRPVFGVSISPQKEFILSCSEDG 425
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 412 FIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQ 471
+A+G DC V LW N P +LTGH PV SV + L+V+GSQ
Sbjct: 35 LVATGGDDCRVNLWSVN-----------KPNCIMSLTGHTTPVESVRFNNAEELIVAGSQ 83
Query: 472 LGPVLV-HTTFGDLLRSL 488
G + V +LR+L
Sbjct: 84 SGSLRVWDLEAAKILRTL 101
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 412 FIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQ 471
+A+G DC V LW N P +LTGH PV SV + L+V+GSQ
Sbjct: 35 LVATGGDDCRVHLWSVN-----------KPNCIMSLTGHTTPVESVRFNNSEELIVAGSQ 83
Query: 472 LGPVLV-HTTFGDLLRSL 488
G + + +LR+L
Sbjct: 84 SGSLRIWDLEAAKILRTL 101
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 59/159 (37%), Gaps = 45/159 (28%)
Query: 340 NCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVV----------------- 382
NC RF+ G +D + +V++T V + GH VV
Sbjct: 99 NCAFNKSGDRFIT--GSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGDKIVTGS 156
Query: 383 -----------TSRIVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNART 431
T ++ + GH + CLS + IA+GS D T LW
Sbjct: 157 FDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNP----QSTIIATGSMDNTAKLW------ 206
Query: 432 QSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGS 470
+ +T RATL GH + S+ + L+V+GS
Sbjct: 207 -----DVETGQERATLAGHRAEIVSLGFNTGGDLIVTGS 240
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 51/126 (40%), Gaps = 24/126 (19%)
Query: 364 FSTDNARIVQIIFGH----YGVVTSRIVQIIFGHYGVVTCLSRSECNITADCFIASGSAD 419
F+T IV F H + V T + V ++ GH G V S ++ N A + SGS D
Sbjct: 229 FNTGGDLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEV---SSTQFNY-AGTLVVSGSID 284
Query: 420 CTVLLWHWNARTQSIVGETDTPTPR--ATLTGHEQPVTSVAISAELGLVVSGSQLGPV-L 476
CT LW D + R + GH V VA A +VS S G L
Sbjct: 285 CTSRLW-------------DVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARL 331
Query: 477 VHTTFG 482
HT G
Sbjct: 332 YHTLTG 337
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 30/130 (23%)
Query: 351 LLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQIIFGHYGVVTCLSRSECNITAD 410
LLA G+ D S R++S + ++ + GH G VT+ + F G +
Sbjct: 73 LLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTT----MTFNRLGNI------------- 115
Query: 411 CFIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGS 470
+ SGS D V++W + T + L GH +TSV + +++ S
Sbjct: 116 --LVSGSKDTEVIVW-----------DIITESGLFRLRGHRDQITSVKLLERSNHLITSS 162
Query: 471 QLGPVLVHTT 480
+ G + + T
Sbjct: 163 KDGFIKIWDT 172
>sp|Q0D0X6|LIS1_ASPTN Nuclear distribution protein nudF OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=nudF PE=3 SV=1
Length = 446
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 21/84 (25%)
Query: 413 IASGSADCTVLLWHWNARTQSIVGETDTPTPRATLTGHEQPVTSVAISAELGLVVSGSQL 472
+ASGS DCT+ +W W +GE + TL GH + V+ + G Q
Sbjct: 130 LASGSEDCTIKIWDWE------LGELER-----TLKGHMRGVSGLDF---------GGQK 169
Query: 473 GPVLVHTTFGDL-LRSLDPPSGFA 495
G L+ + GDL ++ DP +A
Sbjct: 170 GHTLLASCSGDLTIKLWDPSKDYA 193
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 75/184 (40%), Gaps = 37/184 (20%)
Query: 330 NFSQKLRVRHNCFVTTVDSRFLLACGFWDNSFRVFSTDNARIVQIIFGHYGVVTSRIVQI 389
+ + L +R CF + D ++L A G D RV+ + SR ++
Sbjct: 340 DLTGDLYIRSVCF--SPDGKYL-ATGAEDKLIRVWD----------------IQSRTIRN 380
Query: 390 IF-GHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPRATLT 448
F GH + L S T IASGS D TV LW ET T ++
Sbjct: 381 TFHGHEQDIYSLDFSRDGRT----IASGSGDRTVRLWDI---------ETGQNTSVLSI- 426
Query: 449 GHEQPVTSVAISAELGLVVSGSQLGPVLVHTTFGDLLRSLDPPSGFA-SPESVVMSREGV 507
E VT+VAIS + V +GS V V G L L+ P G S SV S +G
Sbjct: 427 --EDGVTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPDGHKDSVYSVAFSPDGR 484
Query: 508 IVVN 511
+V+
Sbjct: 485 NLVS 488
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 444 RATLTGHEQPVTSVAISAELGLVVSGSQLGPVLVHTTFGDLLRSLDPPSGFASPESVVMS 503
+ LTGH VTSVAIS+ L+ S S+ G V + T G+ LR +G S V S
Sbjct: 553 KNVLTGHRDGVTSVAISSHKNLIASASRDGTVHLWTPQGEFLREFTGHTG--SIYRVDFS 610
Query: 504 REGVIVVNYERGH-IAAFTMNGNRLRH-ESHNDNL 536
G I + + + ++GN L+ + H D++
Sbjct: 611 PNGKIFATAGQDQTVKIWDLDGNLLQTLKGHQDSV 645
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 386 IVQIIFGHYGVVTCLSRSECNITADCFIASGSADCTVLLWHWNARTQSIVGETDTPTPRA 445
++Q + GH V +S S +AS S D TV LWHW + G+T A
Sbjct: 634 LLQTLKGHQDSVYSVSFSPDG----EILASTSRDRTVRLWHWRS------GKT-----LA 678
Query: 446 TLTGHEQPVTSVAISAELGLVVSGSQLGPVLVHTTFGDLLRSLDPPS 492
L GH + V S + +VS + G + + G+L+R P
Sbjct: 679 VLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDLDGNLIRQFGLPE 725
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,142,268
Number of Sequences: 539616
Number of extensions: 9454078
Number of successful extensions: 25610
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 237
Number of HSP's that attempted gapping in prelim test: 24947
Number of HSP's gapped (non-prelim): 762
length of query: 540
length of database: 191,569,459
effective HSP length: 122
effective length of query: 418
effective length of database: 125,736,307
effective search space: 52557776326
effective search space used: 52557776326
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)