Query psy12421
Match_columns 168
No_of_seqs 159 out of 2330
Neff 10.5
Searched_HMMs 29240
Date Fri Aug 16 18:54:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12421.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12421hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.9 6.5E-21 2.2E-25 118.5 12.8 96 55-150 11-107 (107)
2 3knb_A Titin; IG-like, titin, 99.8 1.1E-19 3.9E-24 111.4 12.7 94 55-148 3-99 (100)
3 2cqv_A MLCK, myosin light chai 99.8 1.2E-18 4.2E-23 109.1 12.9 101 56-156 6-107 (114)
4 3qp3_A Titin; I-SET IG-like, s 99.8 4.5E-18 1.5E-22 104.5 14.2 96 54-149 5-101 (103)
5 2e7c_A Myosin-binding protein 99.8 7.6E-18 2.6E-22 106.1 13.3 98 53-150 17-117 (118)
6 1g1c_A Immunoglobulin-like dom 99.8 1.5E-17 5.3E-22 101.3 14.0 93 56-148 4-98 (99)
7 3irg_B Obscurin-like protein 1 99.8 9.5E-18 3.3E-22 103.6 12.8 98 53-150 9-107 (107)
8 3puc_A Titin; I-SET IG-like do 99.8 2.5E-17 8.5E-22 100.3 14.0 94 55-148 4-98 (99)
9 1u2h_A APEG-1, aortic preferen 99.8 1.9E-17 6.4E-22 100.9 13.0 93 56-148 4-98 (99)
10 1wit_A Twitchin 18TH IGSF modu 99.8 6.9E-18 2.4E-22 101.9 10.3 89 57-146 2-92 (93)
11 2kdg_A Myotilin; immonoglobuli 99.8 1.5E-17 5.1E-22 101.5 12.0 94 56-149 4-99 (100)
12 1fhg_A Telokin; immunoglobulin 99.8 2.9E-17 9.8E-22 108.2 14.0 103 52-154 36-140 (154)
13 2dm2_A Palladin; beta-sandwich 99.7 1.2E-17 4.2E-22 103.8 9.8 99 55-153 6-107 (110)
14 2edj_A Roundabout homolog 2; K 99.7 2.4E-17 8.1E-22 100.7 10.9 94 55-150 6-100 (100)
15 2kkq_A Myotilin; unknown funct 99.7 3.7E-17 1.3E-21 102.8 11.9 99 55-153 13-114 (116)
16 3irg_A Titin; IG-like, titin, 99.7 6.5E-17 2.2E-21 98.5 12.3 93 56-148 4-99 (100)
17 2yr3_A Myosin light chain kina 99.7 1.5E-17 5.2E-22 101.4 8.8 91 54-146 8-98 (99)
18 2dm3_A KIAA0992 protein, palla 99.7 8.4E-18 2.9E-22 104.4 7.4 100 55-154 7-108 (110)
19 2eo9_A Roundabout homolog 1; b 99.7 1E-17 3.5E-22 105.5 7.8 109 55-166 6-116 (118)
20 2yuz_A Myosin-binding protein 99.7 3.3E-17 1.1E-21 100.4 9.5 93 55-151 5-98 (100)
21 2bk8_A Connectin, M1, titin he 99.7 5E-16 1.7E-20 94.3 13.9 90 60-149 4-95 (97)
22 1waa_A Titin; metal binding pr 99.7 2.8E-16 9.7E-21 94.9 12.5 89 55-148 3-92 (93)
23 3kvq_A Vascular endothelial gr 99.7 3E-17 1E-21 101.5 8.3 97 55-153 8-105 (108)
24 1nct_A Titin; cell adhesion, g 99.7 5E-17 1.7E-21 100.5 8.2 94 54-147 11-105 (106)
25 2wv3_A Neuroplastin; igcam, me 99.7 1.6E-15 5.6E-20 102.5 15.1 126 16-147 57-189 (190)
26 1gxe_A Myosin binding protein 99.7 1.5E-16 5E-21 103.1 9.3 84 64-147 25-138 (139)
27 2a38_A Titin; Z1Z2, structural 99.7 4.2E-16 1.4E-20 105.4 10.7 92 56-147 102-194 (194)
28 1wwb_X Protein (brain derived 99.7 3.2E-16 1.1E-20 96.4 9.1 81 71-151 15-101 (103)
29 2ckn_A Basic fibroblast growth 99.7 5.8E-16 2E-20 93.7 9.9 88 55-146 7-94 (95)
30 2edf_A Obscurin; beta-sandwich 99.7 7E-16 2.4E-20 94.6 9.9 94 55-153 6-100 (103)
31 3kld_A Contactin 4, axcam, BIG 99.7 8E-16 2.7E-20 114.9 12.1 125 16-148 259-383 (384)
32 2j8h_A Titin, connectin; cardi 99.7 3.2E-16 1.1E-20 106.3 8.7 128 16-148 63-197 (197)
33 3b43_A Titin; I-SET IG fold, e 99.7 2.1E-15 7.1E-20 118.0 14.1 131 17-152 349-480 (570)
34 2lu7_A Obscurin-like protein 1 99.7 9.5E-16 3.2E-20 90.9 9.4 80 64-148 3-83 (84)
35 1x44_A Myosin-binding protein 99.7 1.2E-15 4.2E-20 93.6 10.2 91 57-152 7-100 (103)
36 2yd1_A Tyrosine-protein phosph 99.7 2.5E-15 8.6E-20 103.3 12.4 95 58-154 111-206 (212)
37 2rik_A Titin; I-SET IG fold, p 99.6 1.7E-15 6E-20 108.2 11.9 126 17-147 157-283 (284)
38 2e6p_A Obscurin-like protein 1 99.6 1.4E-15 4.9E-20 93.4 9.8 93 56-153 6-102 (104)
39 3caf_A Fibroblast growth facto 99.6 1.2E-15 4.3E-20 92.9 9.3 88 57-146 4-99 (100)
40 1he7_A High affinity nerve gro 99.6 2.5E-15 8.7E-20 95.3 10.9 82 71-152 14-103 (126)
41 2yuv_A Myosin-binding protein 99.6 5.3E-15 1.8E-19 90.2 12.1 91 56-151 6-98 (100)
42 3bfo_A Mucosa-associated lymph 99.6 3.6E-15 1.2E-19 89.4 11.0 85 56-148 2-87 (91)
43 3cx2_A Myosin-binding protein 99.6 3.1E-15 1.1E-19 92.6 10.7 91 57-147 4-107 (108)
44 2r15_A Myomesin-1; sarcomeric 99.6 9.9E-15 3.4E-19 99.9 14.4 90 59-148 119-210 (212)
45 2iep_A Muscle-specific kinase 99.6 1.6E-15 5.4E-20 102.4 10.1 127 17-150 64-192 (192)
46 2dav_A SLOW MYBP-C, myosin-bin 99.6 2.5E-15 8.4E-20 95.4 10.1 97 58-154 8-118 (126)
47 3laf_A Deleted in colorectal c 99.6 1.8E-15 6.2E-20 113.0 10.7 127 17-150 277-403 (403)
48 3mtr_A N-CAM-1, NCAM-1, neural 99.6 1.1E-14 3.6E-19 100.4 13.5 100 55-155 17-119 (215)
49 4fa8_A Secreted protein BARF1; 99.6 4.7E-16 1.6E-20 106.9 6.4 119 17-141 71-195 (203)
50 2edk_A Myosin-binding protein 99.6 4.8E-16 1.6E-20 95.1 5.7 91 55-150 6-101 (101)
51 2eny_A Obscurin; beta-sandwich 99.6 1.7E-15 5.7E-20 93.4 8.1 92 56-151 7-100 (104)
52 2a38_A Titin; Z1Z2, structural 99.6 6.7E-15 2.3E-19 99.4 11.8 94 56-149 4-100 (194)
53 3lcy_A Titin; A-BAND, IG tande 99.6 1E-14 3.5E-19 98.6 12.5 99 55-153 5-104 (197)
54 2lvc_A Obscurin-like protein 1 99.6 2.7E-15 9.1E-20 90.2 8.6 85 57-146 4-91 (91)
55 2yd6_A PTPRD protein; hydrolas 99.6 8.7E-15 3E-19 100.6 12.2 94 57-150 108-206 (212)
56 3rbs_A Myomesin-1; immunoglobu 99.6 4.3E-15 1.5E-19 102.3 10.5 88 57-146 117-205 (207)
57 3b43_A Titin; I-SET IG fold, e 99.6 6.8E-15 2.3E-19 115.1 12.4 126 17-147 442-569 (570)
58 2v9t_A Roundabout homolog 1; s 99.6 1E-14 3.5E-19 91.4 10.9 94 54-149 6-110 (117)
59 2dku_A KIAA1556 protein; beta- 99.6 8.5E-15 2.9E-19 89.7 10.2 93 56-153 7-100 (103)
60 3s97_C Contactin-1; carbonic a 99.6 6.9E-15 2.4E-19 99.7 10.7 129 14-147 65-200 (201)
61 2dlt_A Myosin binding protein 99.6 3E-15 1E-19 92.3 8.1 90 55-147 6-96 (106)
62 2e6q_A Obscurin-like protein 1 99.6 2.4E-14 8.3E-19 89.1 12.2 91 56-151 7-108 (112)
63 2edh_A Obscurin; structural ge 99.6 3.5E-14 1.2E-18 88.4 12.9 91 56-152 18-109 (113)
64 2yd6_A PTPRD protein; hydrolas 99.6 2.7E-14 9.3E-19 98.1 13.5 96 54-149 3-101 (212)
65 2k1m_A Myosin-binding protein 99.6 1.3E-14 4.4E-19 87.7 10.5 86 57-147 8-94 (95)
66 1wwc_A Protein (NT-3 growth fa 99.6 8.1E-15 2.8E-19 92.1 9.9 96 53-151 4-104 (118)
67 2jll_A NCAM2, neural cell adhe 99.6 1.7E-14 6E-19 107.2 13.2 133 16-153 64-199 (389)
68 2cry_A KIN of IRRE-like protei 99.6 4E-16 1.4E-20 98.7 3.5 97 53-150 10-115 (122)
69 1cs6_A Axonin-1; neural cell a 99.6 1.7E-14 6E-19 107.1 12.7 123 17-147 259-381 (382)
70 3grw_A Fibroblast growth facto 99.6 3E-15 1E-19 104.5 7.9 92 63-154 120-224 (241)
71 1pd6_A Cardiac MYBP-C;, myosin 99.6 1.8E-14 6.1E-19 88.7 10.5 88 55-147 13-103 (104)
72 2yd1_A Tyrosine-protein phosph 99.6 8.9E-14 3.1E-18 95.5 15.0 96 55-150 4-104 (212)
73 1bih_A Hemolin; insect immunit 99.6 1.9E-14 6.5E-19 107.2 12.1 122 16-146 271-394 (395)
74 2cr3_A Basic fibroblast growth 99.6 5.7E-15 2E-19 90.0 7.6 84 65-152 11-94 (99)
75 2nzi_A Titin; IG-domain, FNIII 99.6 1.1E-14 3.7E-19 105.0 10.2 135 16-155 63-204 (305)
76 4fqp_A Poliovirus receptor; im 99.6 9.1E-15 3.1E-19 106.1 9.9 95 52-151 211-307 (313)
77 2e7b_A Obscurin; IG-like domai 99.6 7.9E-15 2.7E-19 89.9 8.1 92 55-151 6-98 (103)
78 2edn_A Myosin-binding protein 99.6 1.2E-14 4E-19 91.2 9.0 94 56-149 11-117 (118)
79 2cpc_A KIAA0657 protein; immun 99.6 4.7E-14 1.6E-18 87.7 11.8 92 56-152 9-104 (113)
80 3so5_A LIG-3, leucine-rich rep 99.6 8.4E-14 2.9E-18 85.9 12.9 94 53-146 6-111 (112)
81 3p3y_A Neurofascin; IG domains 99.6 1.7E-14 5.9E-19 107.6 11.5 125 17-148 277-403 (404)
82 2rik_A Titin; I-SET IG fold, p 99.6 1.2E-13 4E-18 98.6 15.2 97 55-151 3-100 (284)
83 2v5m_A Dscam; neurobiology SPL 99.6 1.9E-14 6.6E-19 107.0 11.5 117 16-146 271-387 (388)
84 3m45_A Cell adhesion molecule 99.6 4.1E-14 1.4E-18 87.0 11.2 95 55-150 4-108 (108)
85 2j8h_A Titin, connectin; cardi 99.6 8.1E-14 2.8E-18 94.3 13.5 96 56-151 3-101 (197)
86 1gl4_B Basement membrane-speci 99.6 3.3E-14 1.1E-18 86.3 10.4 81 63-147 16-97 (98)
87 2v44_A NCAM2, neural cell adhe 99.6 3.3E-14 1.1E-18 95.8 11.4 123 16-146 59-185 (189)
88 3lcy_A Titin; A-BAND, IG tande 99.6 5E-14 1.7E-18 95.1 12.3 128 16-148 64-196 (197)
89 2ifg_A High affinity nerve gro 99.6 2.3E-14 8E-19 105.6 11.3 126 16-150 213-347 (347)
90 4hwu_A Fibroblast growth facto 99.6 2.8E-14 9.5E-19 86.2 9.7 84 63-151 7-90 (95)
91 2v5t_A NCAM2, N-CAM 2, neural 99.6 2E-14 7E-19 96.6 9.7 126 15-147 57-187 (189)
92 1epf_A NCAM, protein (neural c 99.6 3.7E-14 1.2E-18 95.6 10.8 124 16-146 63-189 (191)
93 3ejj_X Macrophage colony-stimu 99.6 6.7E-14 2.3E-18 100.0 12.7 134 15-151 144-284 (289)
94 2yd9_A Receptor-type tyrosine- 99.6 4.1E-14 1.4E-18 102.2 11.5 96 55-150 4-102 (304)
95 2cr6_A KIAA1556 protein, obscu 99.6 1E-14 3.4E-19 91.3 7.2 92 57-152 13-106 (115)
96 3ojm_B Fibroblast growth facto 99.6 5.4E-15 1.9E-19 102.3 6.5 92 64-155 125-228 (231)
97 2nzi_A Titin; IG-domain, FNIII 99.6 8E-14 2.7E-18 100.4 12.9 96 56-151 3-101 (305)
98 2c5d_C AXL oncogene, tyrosine- 99.6 8.7E-14 3E-18 94.2 12.3 95 57-151 2-108 (195)
99 3s35_X Vascular endothelial gr 99.6 1.1E-13 3.6E-18 87.3 11.8 88 66-153 17-115 (122)
100 3rbg_A Cytotoxic and regulator 99.6 4.1E-14 1.4E-18 89.7 9.9 90 63-153 7-106 (124)
101 3qr2_A Basigin; CD147, EMMPRIN 99.6 4.1E-14 1.4E-18 91.1 10.0 86 53-138 17-116 (137)
102 1qz1_A Neural cell adhesion mo 99.6 2.1E-14 7.2E-19 102.8 9.5 96 53-148 190-290 (291)
103 2va4_A NCAM2, N-CAM 2, neural 99.6 1.1E-13 3.9E-18 93.1 12.6 126 16-147 59-192 (192)
104 3p2t_A Leukocyte immunoglobuli 99.6 1.7E-14 5.7E-19 98.1 8.4 110 56-167 4-115 (196)
105 2c5d_C AXL oncogene, tyrosine- 99.6 6.4E-14 2.2E-18 94.9 11.2 120 16-146 69-191 (195)
106 2o26_X MAST/stem cell growth f 99.5 1.9E-14 6.6E-19 103.2 9.1 130 15-150 145-290 (290)
107 2x1w_L Vascular endothelial gr 99.5 4.8E-14 1.6E-18 97.1 10.6 132 15-151 64-210 (213)
108 2dm7_A KIAA1556 protein; beta- 99.5 5.7E-14 1.9E-18 86.7 9.8 91 55-151 6-97 (108)
109 2wim_A N-CAM 2, NCAM2, neural 99.5 1.3E-14 4.4E-19 103.9 7.6 131 16-152 154-288 (291)
110 2y25_A Myomesin; structural pr 99.5 2.6E-14 8.8E-19 103.4 9.2 93 57-149 221-316 (317)
111 2v9r_A Roundabout homolog 1; p 99.5 1.2E-14 4.3E-19 99.3 7.1 96 57-154 111-208 (212)
112 3b5h_A Cervical EMMPRIN, HAB18 99.5 2.9E-13 9.7E-18 90.8 13.5 96 53-148 79-183 (184)
113 2ens_A Advanced glycosylation 99.5 8.7E-15 3E-19 88.6 5.4 84 56-147 9-94 (96)
114 2yd9_A Receptor-type tyrosine- 99.5 3.7E-14 1.3E-18 102.4 9.4 93 55-152 203-295 (304)
115 2jll_A NCAM2, neural cell adhe 99.5 2E-13 6.8E-18 101.5 13.3 95 57-152 1-103 (389)
116 1rhf_A Tyrosine-protein kinase 99.5 1E-13 3.5E-18 92.8 10.6 118 16-146 61-181 (182)
117 3jz7_A MCAR, CAR, coxsackievir 99.5 5.9E-15 2E-19 100.9 4.5 127 15-149 84-213 (214)
118 3mjg_X Beta-type platelet-deri 99.5 1.8E-13 6.1E-18 98.0 12.3 99 56-154 180-284 (289)
119 3r4d_A CEA-related cell adhesi 99.5 7.8E-14 2.7E-18 95.2 9.1 128 15-152 71-204 (208)
120 1f97_A Junction adhesion molec 99.5 3.3E-14 1.1E-18 97.1 7.1 129 15-148 65-207 (212)
121 2iep_A Muscle-specific kinase 99.5 4.4E-14 1.5E-18 95.2 7.4 95 55-151 5-102 (192)
122 2d3v_A Leukocyte immunoglobuli 99.5 8.3E-14 2.8E-18 94.7 8.2 110 56-167 4-115 (196)
123 2va4_A NCAM2, N-CAM 2, neural 99.5 3.1E-13 1.1E-17 90.9 10.9 94 57-152 2-98 (192)
124 1vca_A VCAM-D1,2, human vascul 99.5 3.6E-13 1.2E-17 92.2 11.2 104 60-167 3-107 (202)
125 1f2q_A High affinity immunoglo 99.5 1.6E-13 5.4E-18 91.7 9.1 122 15-151 51-174 (176)
126 1itb_B Type 1 interleukin-1 re 99.5 6.3E-14 2.1E-18 101.5 7.5 94 55-148 206-314 (315)
127 2ec8_A MAST/stem cell growth f 99.5 2.7E-13 9.1E-18 104.8 11.4 132 16-152 274-415 (524)
128 1z9m_A GAPA225; nectin-like, I 99.5 2.7E-13 9.3E-18 88.1 9.7 92 61-153 42-143 (145)
129 3oq3_B IFN-alpha/beta binding 99.5 8.1E-14 2.8E-18 101.9 8.0 130 14-150 88-226 (329)
130 3k0w_A Mucosa-associated lymph 99.5 1.8E-13 6.3E-18 94.5 9.1 85 57-149 118-203 (218)
131 1rhf_A Tyrosine-protein kinase 99.5 2.3E-13 7.8E-18 91.1 9.2 96 57-152 2-101 (182)
132 3sgj_C Human FCG3A receptor; r 99.5 2.6E-13 8.8E-18 93.1 9.5 126 15-155 54-181 (204)
133 1epf_A NCAM, protein (neural c 99.5 8.8E-13 3E-17 88.8 12.0 96 57-152 2-103 (191)
134 3qs9_E FL cytokine receptor; i 99.5 4.9E-14 1.7E-18 109.5 6.3 124 17-151 292-417 (527)
135 3qs7_E FL cytokine receptor; i 99.5 5.7E-14 1.9E-18 106.4 6.4 128 16-154 291-420 (423)
136 3ojm_B Fibroblast growth facto 99.5 3.5E-13 1.2E-17 93.1 9.9 94 55-150 13-114 (231)
137 3uto_A Twitchin; kinase, muscl 99.5 1.4E-12 4.9E-17 102.2 14.4 93 54-146 479-572 (573)
138 2ny1_B T-cell surface glycopro 99.5 2.7E-13 9.2E-18 91.1 9.0 114 17-152 70-183 (184)
139 3kld_A Contactin 4, axcam, BIG 99.5 3E-13 1E-17 100.9 10.1 92 57-151 204-297 (384)
140 1qz1_A Neural cell adhesion mo 99.5 3E-13 1E-17 96.7 9.7 130 16-152 63-197 (291)
141 2wv3_A Neuroplastin; igcam, me 99.5 8.4E-13 2.9E-17 89.0 11.3 91 56-152 2-95 (190)
142 3u83_A Poliovirus receptor-rel 99.5 2.6E-13 9E-18 98.8 9.4 97 52-153 226-325 (331)
143 2eo1_A OBSCN protein, cDNA FLJ 99.5 3.3E-13 1.1E-17 82.4 8.4 80 66-150 20-100 (102)
144 3v2a_R Vascular endothelial gr 99.5 4.7E-15 1.6E-19 119.1 0.0 136 17-155 627-763 (772)
145 2v5t_A NCAM2, N-CAM 2, neural 99.5 5.6E-13 1.9E-17 89.5 10.2 93 57-151 2-98 (189)
146 2gi7_A GPVI protein; IG-like d 99.5 3.6E-13 1.2E-17 90.7 9.2 103 54-167 5-109 (184)
147 4fom_A Poliovirus receptor-rel 99.5 3.4E-14 1.2E-18 102.7 4.3 97 52-152 206-304 (308)
148 2fbo_J V1V2;, variable region- 99.5 1.5E-13 5.1E-18 96.3 7.4 127 15-145 90-249 (250)
149 1ry7_B FGFR-3, fibroblast grow 99.4 6E-14 2.1E-18 102.4 5.1 89 64-152 229-331 (334)
150 2v44_A NCAM2, neural cell adhe 99.4 2.7E-12 9.3E-17 86.3 12.8 93 59-152 4-99 (189)
151 2vr9_A Roundabout 1, ROBO; imm 99.4 4.4E-13 1.5E-17 92.1 8.6 90 57-148 108-206 (217)
152 3dmk_A DOWN syndrome cell adhe 99.4 1.3E-12 4.4E-17 105.9 12.3 97 55-151 427-529 (816)
153 3p3y_A Neurofascin; IG domains 99.4 4.9E-13 1.7E-17 99.7 9.0 134 14-151 170-314 (404)
154 3laf_A Deleted in colorectal c 99.4 6.2E-13 2.1E-17 99.2 9.5 134 14-151 176-314 (403)
155 1e07_A Carcinoembryonic antige 99.4 1.7E-12 5.7E-17 102.7 12.3 118 16-148 521-640 (642)
156 2ec8_A MAST/stem cell growth f 99.4 7.7E-13 2.6E-17 102.2 10.2 151 14-167 167-329 (524)
157 1nbq_A JAM, junctional adhesio 99.4 2.6E-14 8.8E-19 97.4 1.7 125 15-142 68-201 (209)
158 1fnl_A Low affinity immunoglob 99.4 1E-12 3.6E-17 87.6 9.5 79 63-148 94-174 (175)
159 4fa8_A Secreted protein BARF1; 99.4 2.7E-13 9.2E-18 93.1 6.7 86 66-151 2-108 (203)
160 2y23_A Myomesin; structural pr 99.4 1.5E-12 5E-17 93.9 10.7 88 57-147 222-311 (312)
161 4dkd_C Macrophage colony-stimu 99.4 1.4E-12 4.8E-17 93.3 10.5 136 15-153 144-286 (292)
162 1uct_A Immunoglobulin alpha FC 99.4 2.6E-13 8.7E-18 94.1 6.3 112 54-167 6-121 (218)
163 3o4o_C Interleukin-1 receptor 99.4 5E-13 1.7E-17 97.8 7.9 111 55-167 16-136 (339)
164 1ry7_B FGFR-3, fibroblast grow 99.4 1.3E-13 4.6E-18 100.6 4.8 84 67-150 133-218 (334)
165 4i0k_A CD276 antigen; immunogl 99.4 6.8E-13 2.3E-17 91.4 8.1 133 15-152 72-210 (222)
166 4dep_C Interleukin-1 receptor 99.4 2.1E-13 7.2E-18 100.1 5.8 81 66-149 129-218 (349)
167 3bp6_B Programmed cell death 1 99.4 2.9E-13 1E-17 92.1 6.1 81 68-149 114-194 (202)
168 1ugn_A LIR1, leukocyte immunog 99.4 1.6E-12 5.6E-17 88.3 9.6 118 14-137 57-182 (198)
169 2vr9_A Roundabout 1, ROBO; imm 99.4 2.9E-12 9.9E-17 88.0 10.9 94 55-148 7-106 (217)
170 3zyj_A Leucine-rich repeat-con 99.4 1.1E-12 3.8E-17 99.7 9.6 96 55-153 339-438 (440)
171 3sbw_C Programmed cell death 1 99.4 1.1E-12 3.8E-17 90.3 8.6 130 16-151 81-214 (222)
172 3vh8_G Killer cell immunoglobu 99.4 2.2E-12 7.4E-17 93.7 10.3 148 14-167 73-234 (316)
173 1bih_A Hemolin; insect immunit 99.4 4.6E-13 1.6E-17 99.7 6.8 93 54-148 3-99 (395)
174 3rjd_A High affinity immunoglo 99.4 1.6E-12 5.5E-17 91.5 9.2 101 60-167 85-186 (262)
175 1oll_A NK receptor; immune sys 99.4 1.1E-12 3.7E-17 88.7 7.9 109 57-167 4-114 (188)
176 3dmk_A DOWN syndrome cell adhe 99.4 1.4E-12 4.9E-17 105.6 9.9 128 17-151 679-812 (816)
177 2ocw_A Polymeric-immunoglobuli 99.4 3.5E-12 1.2E-16 99.7 11.6 127 17-150 408-548 (585)
178 1ugn_A LIR1, leukocyte immunog 99.4 1.2E-13 4.1E-18 94.0 2.8 108 56-167 4-116 (198)
179 3ry4_A Low affinity immunoglob 99.4 2E-12 7E-17 85.5 8.7 117 15-146 51-169 (170)
180 3p2t_A Leukocyte immunoglobuli 99.4 1.2E-12 4E-17 88.9 7.5 116 15-136 58-179 (196)
181 3grw_A Fibroblast growth facto 99.4 5.2E-12 1.8E-16 87.9 10.9 92 56-149 10-109 (241)
182 4frw_A Poliovirus receptor-rel 99.4 9.1E-13 3.1E-17 89.9 6.8 127 16-147 80-210 (218)
183 4f80_A Butyrophilin subfamily 99.4 6.2E-13 2.1E-17 92.1 5.9 89 66-154 127-219 (226)
184 2d3v_A Leukocyte immunoglobuli 99.4 7.6E-13 2.6E-17 89.9 6.2 117 15-137 58-181 (196)
185 3k0w_A Mucosa-associated lymph 99.4 3.4E-12 1.2E-16 88.0 9.6 88 55-150 16-104 (218)
186 2wim_A N-CAM 2, NCAM2, neural 99.4 1.1E-11 3.6E-16 88.6 12.4 95 56-151 3-100 (291)
187 3o4o_C Interleukin-1 receptor 99.4 2.6E-13 9E-18 99.2 4.1 84 67-150 130-222 (339)
188 3bp6_B Programmed cell death 1 99.4 9.4E-12 3.2E-16 84.6 11.6 91 63-153 8-108 (202)
189 1f97_A Junction adhesion molec 99.4 2.4E-12 8.3E-17 87.7 8.4 93 58-154 2-109 (212)
190 3khq_A B-cell antigen receptor 99.4 4.4E-12 1.5E-16 81.4 9.0 92 58-151 18-120 (133)
191 1vca_A VCAM-D1,2, human vascul 99.4 8.7E-13 3E-17 90.3 5.8 86 67-152 101-201 (202)
192 2ghw_B Anti-SARS SCFV antibody 99.4 3.9E-12 1.3E-16 89.1 9.1 91 57-147 135-241 (247)
193 2v9r_A Roundabout homolog 1; p 99.4 7.9E-12 2.7E-16 85.2 10.4 96 55-150 7-111 (212)
194 1oll_A NK receptor; immune sys 99.4 2E-12 6.9E-17 87.3 7.4 112 15-135 57-172 (188)
195 3sgj_C Human FCG3A receptor; r 99.4 2.9E-12 9.9E-17 87.8 8.2 98 56-167 6-104 (204)
196 3qs7_E FL cytokine receptor; i 99.3 6.7E-12 2.3E-16 95.1 10.7 92 59-150 50-141 (423)
197 2id5_A Lingo-1, leucine rich r 99.3 2.1E-12 7.1E-17 98.9 7.8 82 64-147 392-476 (477)
198 1cs6_A Axonin-1; neural cell a 99.3 4.5E-12 1.5E-16 94.1 9.4 93 56-150 3-101 (382)
199 1uct_A Immunoglobulin alpha FC 99.3 1.6E-12 5.5E-17 90.0 6.5 126 16-149 65-199 (218)
200 2v5m_A Dscam; neurobiology SPL 99.3 5.2E-12 1.8E-16 93.8 9.7 94 56-151 2-105 (388)
201 3rbs_A Myomesin-1; immunoglobu 99.3 1.1E-11 3.6E-16 85.3 10.6 84 58-144 4-91 (207)
202 2y25_A Myomesin; structural pr 99.3 4.3E-12 1.5E-16 91.6 8.9 91 55-148 5-97 (317)
203 1e07_A Carcinoembryonic antige 99.3 7.4E-12 2.5E-16 98.9 10.9 138 15-167 342-483 (642)
204 3oq3_B IFN-alpha/beta binding 99.3 5.1E-12 1.7E-16 92.3 9.3 84 63-146 234-328 (329)
205 1itb_B Type 1 interleukin-1 re 99.3 2.2E-12 7.7E-17 93.3 7.3 118 15-138 62-189 (315)
206 3umt_A SCFV heavy chain and li 99.3 3.7E-12 1.3E-16 89.9 8.1 95 57-151 138-248 (256)
207 3nl4_L Antigen binding fragmen 99.3 7.8E-12 2.7E-16 85.6 9.4 91 58-148 2-110 (213)
208 3uzq_A Anti-dengue MAB 4E11; d 99.3 2.5E-12 8.4E-17 90.7 6.9 98 56-153 132-249 (253)
209 1gsm_A Madcam-1, mucosal addre 99.3 3.1E-11 1.1E-15 83.1 12.0 83 67-154 17-101 (210)
210 2ocw_A Polymeric-immunoglobuli 99.3 9E-12 3.1E-16 97.3 10.2 144 16-167 291-458 (585)
211 3zyi_A Leucine-rich repeat-con 99.3 1.6E-12 5.6E-17 99.1 5.6 96 55-154 350-449 (452)
212 2rcj_C Light chain; immunoglob 99.3 7.6E-12 2.6E-16 96.6 9.4 95 55-150 217-318 (523)
213 2gi7_A GPVI protein; IG-like d 99.3 1.5E-12 5.1E-17 87.7 4.8 113 15-136 52-168 (184)
214 1hng_A CD2; T lymphocyte adhes 99.3 6.8E-13 2.3E-17 88.9 3.0 65 72-146 110-174 (176)
215 1sy6_A T-cell surface glycopro 99.3 3E-12 1E-16 87.8 6.1 73 70-146 126-202 (204)
216 1nkr_A P58-CL42 KIR; inhibitor 99.3 6.8E-12 2.3E-16 85.5 7.8 110 56-167 7-123 (201)
217 1z7z_I Intercellular adhesion 99.3 2.6E-12 8.9E-17 97.4 6.0 116 16-148 328-449 (450)
218 1fnl_A Low affinity immunoglob 99.3 1E-11 3.5E-16 82.8 8.1 82 56-148 6-88 (175)
219 1dr9_A B7-1 (CD80), T lymphocy 99.3 3.9E-11 1.3E-15 81.4 11.1 125 14-144 64-197 (201)
220 1f3r_B FV antibody fragment; I 99.3 1.1E-12 3.7E-17 92.9 3.3 91 60-150 142-247 (257)
221 1nqb_A Single-chain antibody f 99.3 1.1E-11 3.8E-16 87.7 8.6 131 16-148 80-233 (256)
222 2pet_A Lutheran blood group gl 99.3 4.4E-12 1.5E-16 87.7 6.3 117 14-134 76-211 (231)
223 1jhl_L IGG1-kappa D11.15 FV (l 99.3 3.6E-11 1.2E-15 74.1 9.7 76 60-135 4-94 (108)
224 1z7z_I Intercellular adhesion 99.3 8.3E-12 2.8E-16 94.6 7.8 80 56-137 84-167 (450)
225 1pko_A Myelin oligodendrocyte 99.3 2.2E-10 7.6E-15 73.6 13.4 88 63-150 12-123 (139)
226 3mj6_A Junctional adhesion mol 99.3 5.9E-12 2E-16 89.1 6.5 87 64-150 125-239 (268)
227 4dep_C Interleukin-1 receptor 99.3 5.2E-13 1.8E-17 98.0 0.9 92 57-148 224-333 (349)
228 1p6f_A NKP46, natural cytotoxi 99.3 1.6E-11 5.5E-16 86.4 8.3 129 15-152 60-195 (242)
229 3d9a_L Light chain of hyhel10 99.3 3E-11 1E-15 82.7 9.4 89 60-148 4-108 (213)
230 3ejj_X Macrophage colony-stimu 99.3 1.6E-11 5.5E-16 87.6 8.2 128 14-148 50-181 (289)
231 1p6f_A NKP46, natural cytotoxi 99.3 1.8E-11 6.1E-16 86.1 8.3 111 55-167 5-117 (242)
232 3mj8_L Stimulatory hamster ant 99.3 2.6E-12 9.1E-17 88.0 3.8 122 17-142 72-207 (213)
233 3mj8_L Stimulatory hamster ant 99.3 4.7E-11 1.6E-15 81.7 10.1 83 66-148 9-109 (213)
234 2xot_A Amphoterin-induced prot 99.3 3.3E-11 1.1E-15 89.4 9.9 82 64-150 253-339 (361)
235 3qs9_E FL cytokine receptor; i 99.3 2.7E-11 9.3E-16 94.2 9.7 110 53-167 225-342 (527)
236 3juy_B 3B3 single chain varian 99.3 3.4E-11 1.1E-15 85.0 9.3 80 57-136 149-244 (256)
237 1f2q_A High affinity immunoglo 99.3 6.7E-12 2.3E-16 83.7 5.4 81 56-147 3-84 (176)
238 3gkz_A Anti-methamphetamine si 99.3 2.6E-11 8.8E-16 85.6 8.6 95 57-151 141-252 (257)
239 2wng_A Tyrosine-protein phosph 99.2 2.1E-11 7E-16 88.8 8.2 109 58-167 4-133 (327)
240 1moe_A Anti-CEA MAB T84.66; an 99.2 2.4E-11 8.4E-16 84.7 8.1 91 59-149 3-113 (240)
241 2if7_A SLAM family member 6; N 99.2 3.1E-11 1.1E-15 81.9 8.2 112 14-142 69-186 (193)
242 2znx_A SCFV; fluorotryptohpan, 99.2 5.5E-11 1.9E-15 83.3 9.4 92 59-150 3-110 (242)
243 1jbj_A CD3 epsilon and gamma e 99.2 6.7E-12 2.3E-16 84.7 4.5 61 69-138 119-179 (186)
244 3u83_A Poliovirus receptor-rel 99.2 2.2E-11 7.5E-16 88.6 7.6 132 15-151 92-233 (331)
245 2rcj_C Light chain; immunoglob 99.2 2.5E-11 8.4E-16 93.8 8.3 126 16-144 71-210 (523)
246 3r4d_A CEA-related cell adhesi 99.2 6E-11 2.1E-15 80.7 9.3 103 62-167 4-126 (208)
247 2p1y_A Bispecific alpha/beta T 99.2 1.3E-11 4.4E-16 86.0 6.0 77 59-135 129-222 (238)
248 1q9r_B S25-2 FAB (IGG1K) heavy 99.2 1.4E-11 4.7E-16 85.1 6.1 125 16-144 82-219 (222)
249 4dkd_C Macrophage colony-stimu 99.2 1.1E-11 3.7E-16 88.6 5.7 125 16-148 52-181 (292)
250 3jz7_A MCAR, CAR, coxsackievir 99.2 3.2E-11 1.1E-15 82.1 7.8 91 64-154 7-126 (214)
251 3rjd_A High affinity immunoglo 99.2 5.8E-11 2E-15 83.5 9.1 82 57-149 1-83 (262)
252 3esu_F Antibody 14B7* light ch 99.2 5.2E-11 1.8E-15 83.5 8.8 91 58-148 5-111 (250)
253 1nbq_A JAM, junctional adhesio 99.2 1.2E-11 4.2E-16 84.0 5.3 94 57-154 4-112 (209)
254 3d9a_L Light chain of hyhel10 99.2 3.9E-12 1.3E-16 87.1 2.8 122 16-142 72-207 (213)
255 1eaj_A Coxsackie virus and ade 99.2 4E-11 1.4E-15 75.2 7.2 89 60-148 8-125 (126)
256 1qok_A MFE-23 recombinant anti 99.2 6.3E-11 2.2E-15 84.9 9.1 91 57-148 162-268 (282)
257 3s96_B 3B5H10 FAB light chain; 99.2 9.3E-11 3.2E-15 80.4 9.6 89 59-148 3-116 (218)
258 1mqk_L Antibody 7E2 FV fragmen 99.2 1.5E-10 5.2E-15 72.7 9.7 90 60-149 4-110 (120)
259 1svz_A Immunoglobulin;, single 99.2 5.9E-11 2E-15 83.2 8.6 91 59-149 3-114 (247)
260 2q20_A VK1 O18/O8 germline lig 99.2 1.5E-10 5E-15 71.5 9.4 77 58-134 4-95 (109)
261 3pv7_A B7-H6, IG-like domain-c 99.2 6.9E-11 2.4E-15 82.8 8.9 124 17-146 84-224 (248)
262 1wio_A CD4, T-cell surface gly 99.2 1.9E-11 6.4E-16 90.3 6.2 84 65-148 184-293 (363)
263 1lk3_L 9D7 light chain; antige 99.2 8.9E-11 3.1E-15 80.2 9.1 85 64-148 7-107 (210)
264 3r06_A Anti-mouse CD3epsilon a 99.2 1.4E-10 4.7E-15 79.3 10.0 89 58-146 2-106 (213)
265 2o26_X MAST/stem cell growth f 99.2 1.7E-11 5.7E-16 87.8 5.6 122 15-147 57-182 (290)
266 3eow_R Poliovirus receptor; im 99.2 4.6E-11 1.6E-15 82.3 7.6 125 15-145 78-209 (221)
267 2qsq_A Carcinoembryonic antige 99.2 1.7E-10 5.7E-15 71.6 9.2 84 63-148 6-109 (111)
268 3r08_E T-cell surface glycopro 99.2 9.7E-12 3.3E-16 72.7 3.3 60 64-133 6-66 (82)
269 2y23_A Myomesin; structural pr 99.2 1.4E-10 4.8E-15 83.5 10.1 86 57-142 106-196 (312)
270 1q0x_L FAB 9B1, light chain; a 99.2 2.6E-11 9E-16 82.9 6.0 85 56-140 114-207 (212)
271 3auv_A SC-DSFV derived from th 99.2 6.9E-11 2.4E-15 84.4 8.3 93 57-149 12-120 (276)
272 3q0h_A T cell immunoreceptor w 99.2 3.6E-10 1.2E-14 70.7 10.6 88 63-153 9-113 (117)
273 2r15_A Myomesin-1; sarcomeric 99.2 2.8E-10 9.6E-15 77.5 10.9 79 69-147 14-94 (212)
274 3ry4_A Low affinity immunoglob 99.2 5.4E-11 1.9E-15 78.6 7.1 82 57-149 4-86 (170)
275 2zg1_A Sialic acid-binding IG- 99.2 3.6E-11 1.2E-15 82.3 6.4 117 16-144 83-209 (214)
276 2fbo_J V1V2;, variable region- 99.2 4.1E-11 1.4E-15 83.7 6.8 87 63-150 8-133 (250)
277 2gjj_A A21 single-chain antibo 99.2 9.1E-11 3.1E-15 83.4 8.6 94 57-150 5-120 (264)
278 2c1o_A IGK-C protein; FAB frag 99.2 1.1E-10 3.8E-15 82.0 9.1 92 57-148 38-150 (254)
279 3vh8_G Killer cell immunoglobu 99.2 1.9E-11 6.3E-16 88.7 5.1 110 53-167 20-134 (316)
280 1hng_A CD2; T lymphocyte adhes 99.2 6.9E-11 2.4E-15 79.1 7.5 82 67-151 6-102 (176)
281 3fku_X Neutralizing antibody F 99.2 7.1E-11 2.4E-15 84.6 8.0 93 57-150 140-252 (280)
282 2ifg_A High affinity nerve gro 99.2 1.2E-11 4E-16 91.2 4.0 97 54-151 155-252 (347)
283 1lk3_L 9D7 light chain; antige 99.2 1.5E-11 5.1E-16 84.2 4.2 83 56-138 110-202 (210)
284 2e27_L Anti-ciguatoxin antibod 99.2 2.5E-10 8.4E-15 71.7 9.4 77 58-134 4-95 (119)
285 1xau_A B- and T-lymphocyte att 99.2 5.1E-10 1.8E-14 67.9 10.0 82 67-148 24-116 (122)
286 2xzc_L FAB A.17 light chain; i 99.2 2E-11 6.8E-16 83.9 4.5 84 56-139 113-206 (216)
287 3tv3_L PGT128 light chain, IG 99.2 2E-11 6.8E-16 83.5 4.5 124 16-142 69-205 (211)
288 1nkr_A P58-CL42 KIR; inhibitor 99.2 1.4E-10 4.8E-15 78.9 8.6 112 16-135 64-184 (201)
289 2oz4_A Intercellular adhesion 99.2 1.4E-10 4.9E-15 82.0 8.9 97 58-167 101-201 (265)
290 3udw_C Poliovirus receptor; PV 99.2 2.8E-10 9.5E-15 70.7 9.2 85 66-150 9-118 (118)
291 3v2a_R Vascular endothelial gr 99.2 2.7E-10 9.2E-15 91.5 11.4 96 58-153 224-331 (772)
292 3u6r_L Antibody 1:7 (light cha 99.2 3.6E-10 1.2E-14 73.2 9.9 95 60-154 3-112 (143)
293 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.2 1.7E-10 5.7E-15 81.5 8.8 82 56-138 136-236 (256)
294 1i8k_A Epidermal growth factor 99.2 1.9E-10 6.6E-15 70.7 7.9 75 60-134 4-93 (107)
295 2wng_A Tyrosine-protein phosph 99.1 7.6E-11 2.6E-15 85.8 7.1 86 53-140 218-311 (327)
296 3nl4_L Antigen binding fragmen 99.1 7.3E-11 2.5E-15 80.7 6.6 113 16-132 72-198 (213)
297 4hwn_A FC receptor-like A; FCR 99.1 1.9E-10 6.5E-15 71.0 7.9 73 56-136 7-84 (108)
298 2oz4_A Intercellular adhesion 99.1 3.5E-10 1.2E-14 80.0 10.3 94 67-167 13-114 (265)
299 2gki_A Nuclease; anti-DNA anti 99.1 1.4E-10 4.9E-15 83.5 8.3 96 57-152 159-276 (291)
300 1qfw_M FV, antibody (anti beta 99.1 2.3E-10 7.7E-15 70.5 8.1 75 60-134 4-93 (108)
301 2x1w_L Vascular endothelial gr 99.1 4.1E-11 1.4E-15 82.3 5.2 82 64-148 14-101 (213)
302 1mju_H Immunoglobulin MS6-12; 99.1 3.8E-11 1.3E-15 83.4 5.0 135 16-154 80-223 (227)
303 3s96_B 3B5H10 FAB light chain; 99.1 3.6E-11 1.2E-15 82.5 4.8 123 17-142 77-214 (218)
304 1wio_A CD4, T-cell surface gly 99.1 5.1E-11 1.8E-15 88.0 5.9 118 14-153 66-183 (363)
305 4gos_A V-SET domain-containing 99.1 3.2E-10 1.1E-14 71.8 8.8 87 62-148 10-120 (125)
306 1c1e_H Catalytic antibody 1E9 99.1 2.3E-11 7.9E-16 83.7 3.6 125 16-144 80-216 (219)
307 4f80_A Butyrophilin subfamily 99.1 1.8E-09 6E-14 74.6 13.1 84 65-148 12-119 (226)
308 1qgc_4 Protein (immunoglobulin 99.1 2.1E-10 7.2E-15 86.5 9.1 89 60-148 221-338 (438)
309 3tv3_L PGT128 light chain, IG 99.1 2.9E-10 9.8E-15 77.7 8.7 80 66-147 9-105 (211)
310 3sob_L Antibody light chain; b 99.1 1.3E-09 4.4E-14 75.5 12.0 92 57-148 24-131 (237)
311 3d9a_H Heavy chain of hyhel10 99.1 4.4E-11 1.5E-15 81.8 4.5 121 16-141 79-207 (210)
312 1f3r_B FV antibody fragment; I 99.1 5.9E-10 2E-14 78.7 10.4 88 63-150 6-125 (257)
313 3auv_A SC-DSFV derived from th 99.1 2E-10 7E-15 81.9 8.1 75 60-134 137-235 (276)
314 1jbj_A CD3 epsilon and gamma e 99.1 8.4E-11 2.9E-15 79.3 5.7 70 68-147 10-80 (186)
315 1b6u_A KIR2DL3, P58 killer cel 99.1 1.7E-10 5.8E-15 81.9 7.5 110 56-167 6-122 (257)
316 4fmk_A Poliovirus receptor-rel 99.1 2.3E-10 7.9E-15 78.2 8.0 129 15-148 83-219 (225)
317 2vsd_A CHIR AB1; immune system 99.1 1.4E-10 4.7E-15 71.2 6.0 75 57-135 5-79 (105)
318 3omz_A Human vdelta1 gamma del 99.1 7.7E-11 2.6E-15 83.3 5.5 93 57-149 2-119 (259)
319 1h5b_A Murine T cell receptor 99.1 6.3E-10 2.1E-14 69.0 9.0 76 60-136 4-95 (113)
320 1zox_A CLM-1; IG-superfamily, 99.1 1.1E-09 3.8E-14 67.8 10.1 88 63-150 7-112 (113)
321 3mjg_X Beta-type platelet-deri 99.1 3.8E-11 1.3E-15 85.8 3.7 80 63-148 6-90 (289)
322 4ffy_L DENV1-E111 single chain 99.1 7.9E-10 2.7E-14 70.0 9.4 92 59-150 3-114 (126)
323 1qgc_4 Protein (immunoglobulin 99.1 9.8E-11 3.4E-15 88.3 6.0 123 16-142 76-211 (438)
324 2pet_A Lutheran blood group gl 99.1 7.6E-11 2.6E-15 81.4 4.9 90 63-154 6-120 (231)
325 1nfd_E H57 FAB; complex (immun 99.1 3E-12 1E-16 87.7 -2.2 84 55-138 111-202 (212)
326 2ywz_A NEW antigen receptor va 99.1 1.6E-09 5.3E-14 67.1 10.4 75 60-134 3-88 (111)
327 2d9c_A Signal-regulatory prote 99.1 1.6E-09 5.5E-14 69.3 10.8 94 59-152 10-125 (136)
328 1hnf_A CD2; T lymphocyte adhes 99.1 2E-10 6.7E-15 77.4 6.6 106 14-144 65-177 (182)
329 3sob_L Antibody light chain; b 99.1 6E-11 2.1E-15 82.3 4.2 122 17-142 96-230 (237)
330 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.1 9.6E-10 3.3E-14 77.5 10.3 91 58-148 4-116 (256)
331 3ux9_B SCFV antibody; five hel 99.1 7.2E-10 2.4E-14 78.0 9.5 73 63-135 140-236 (256)
332 2if7_A SLAM family member 6; N 99.1 3.2E-10 1.1E-14 76.8 7.4 86 64-152 5-110 (193)
333 4fom_A Poliovirus receptor-rel 99.1 3.8E-11 1.3E-15 86.6 3.0 130 16-150 75-212 (308)
334 3b5h_A Cervical EMMPRIN, HAB18 99.1 6.8E-10 2.3E-14 74.1 9.0 90 67-167 8-99 (184)
335 2ghw_B Anti-SARS SCFV antibody 99.1 5.4E-10 1.9E-14 78.2 8.8 87 63-149 8-120 (247)
336 3pv7_A B7-H6, IG-like domain-c 99.1 6.1E-10 2.1E-14 78.0 9.1 89 64-152 10-122 (248)
337 1q0x_L FAB 9B1, light chain; a 99.1 1.1E-09 3.7E-14 74.9 10.1 84 64-147 7-109 (212)
338 4dzb_B Vbeta2 (MAIT T cell rec 99.1 4.7E-10 1.6E-14 78.4 8.3 78 59-136 3-101 (246)
339 2p1y_A Bispecific alpha/beta T 99.1 3.7E-10 1.3E-14 78.5 7.7 90 60-150 3-116 (238)
340 4fqp_A Poliovirus receptor; im 99.1 2E-10 6.8E-15 83.1 6.6 131 16-150 80-217 (313)
341 3bkj_L WO2 IGG2A FAB fragment 99.1 8.4E-10 2.9E-14 77.6 9.6 93 56-148 33-146 (252)
342 1i3g_L Antibody FV fragment; a 99.1 7.2E-10 2.5E-14 68.6 8.2 77 58-134 5-96 (111)
343 3rrq_A Protein PD-1, programme 99.1 7E-10 2.4E-14 70.6 8.3 91 61-151 5-118 (129)
344 1xt5_A Variable region-contain 99.1 4.9E-10 1.7E-14 71.4 7.6 86 62-148 9-133 (135)
345 2d9q_B Granulocyte colony-stim 99.1 2.2E-10 7.6E-15 83.2 6.7 94 63-156 6-105 (313)
346 1c1e_H Catalytic antibody 1E9 99.1 1E-09 3.5E-14 75.4 9.7 86 63-148 6-119 (219)
347 1ccz_A Protein (CD58); LFA-3, 99.1 2.1E-10 7.2E-15 76.4 5.9 81 66-151 4-97 (171)
348 2v5y_A Receptor-type tyrosine- 99.1 4.8E-10 1.6E-14 90.1 9.0 99 56-155 164-267 (731)
349 1i1r_A GP130, interleukin-6 re 99.1 2.2E-09 7.5E-14 77.5 11.6 91 62-155 9-109 (303)
350 3juy_B 3B3 single chain varian 99.1 8E-10 2.7E-14 77.9 9.1 79 56-134 5-107 (256)
351 2c1o_A IGK-C protein; FAB frag 99.1 2.3E-10 7.9E-15 80.4 6.1 118 16-138 114-245 (254)
352 4frw_A Poliovirus receptor-rel 99.1 1.1E-09 3.7E-14 74.4 9.2 84 64-147 6-115 (218)
353 1nfd_E H57 FAB; complex (immun 99.1 3E-10 1E-14 77.6 6.4 71 64-134 6-91 (212)
354 3ux9_B SCFV antibody; five hel 99.1 6.8E-10 2.3E-14 78.1 8.3 86 65-150 10-115 (256)
355 3r06_A Anti-mouse CD3epsilon a 99.1 3.2E-10 1.1E-14 77.5 6.4 119 16-138 72-203 (213)
356 3s97_C Contactin-1; carbonic a 99.0 1.8E-10 6E-15 77.7 5.0 76 63-140 14-94 (201)
357 2j6e_L IGM, FAB light chain; a 99.0 4.1E-11 1.4E-15 83.2 1.8 87 56-142 134-229 (234)
358 2dru_A Chimera of CD48 antigen 99.0 3.2E-10 1.1E-14 76.2 6.1 61 72-143 115-176 (180)
359 1moe_A Anti-CEA MAB T84.66; an 99.0 8.9E-10 3E-14 76.7 8.5 116 16-133 76-219 (240)
360 1j05_L T84.66 antibody, anti-C 99.0 5.3E-10 1.8E-14 69.1 6.5 75 60-134 4-97 (111)
361 1b6u_A KIR2DL3, P58 killer cel 99.0 1.4E-10 4.9E-15 82.2 4.4 128 16-151 63-204 (257)
362 1qok_A MFE-23 recombinant anti 99.0 1.4E-09 4.7E-14 77.9 9.6 91 60-150 29-148 (282)
363 2yc1_B Single chain antibody f 99.0 2.5E-09 8.4E-14 69.5 9.9 93 57-149 16-124 (146)
364 2zg1_A Sialic acid-binding IG- 99.0 1.2E-09 4E-14 74.6 8.8 103 63-167 6-139 (214)
365 3gkz_A Anti-methamphetamine si 99.0 2.5E-09 8.5E-14 75.3 10.7 90 60-149 11-127 (257)
366 3mj6_A Junctional adhesion mol 99.0 5.4E-10 1.9E-14 78.9 7.2 90 58-147 6-121 (268)
367 1za6_B IGG heavy chain; immuno 99.0 1.1E-09 3.6E-14 80.5 8.8 86 63-148 6-115 (344)
368 1dee_B IGM RF 2A2; FAB-IBP com 99.0 2.2E-09 7.6E-14 74.2 9.7 87 56-142 125-221 (223)
369 3nfj_J T cell receptor beta ch 99.0 6.2E-09 2.1E-13 72.7 12.1 76 59-134 3-96 (245)
370 1pz5_B Heavy chain of FAB (SYA 99.0 2.9E-10 9.8E-15 78.3 5.2 122 16-143 82-216 (220)
371 2q87_A CMRF35-H antigen; all-b 99.0 1.3E-09 4.6E-14 67.1 7.7 86 65-150 4-108 (110)
372 1svz_A Immunoglobulin;, single 99.0 7.6E-10 2.6E-14 77.5 7.4 75 60-134 130-228 (247)
373 2xzc_L FAB A.17 light chain; i 99.0 1.2E-09 4.2E-14 74.8 8.1 85 64-148 7-110 (216)
374 1nqb_A Single-chain antibody f 99.0 2.2E-09 7.5E-14 75.8 9.3 88 63-150 6-122 (256)
375 4fmk_A Poliovirus receptor-rel 99.0 7.7E-10 2.6E-14 75.5 6.7 84 66-149 10-121 (225)
376 1igy_B IGG1 intact antibody MA 99.0 3.6E-10 1.2E-14 85.5 5.5 127 16-144 79-211 (434)
377 2aw2_A B and T lymphocyte atte 99.0 1.7E-08 5.8E-13 60.6 11.4 82 67-148 21-110 (120)
378 1op3_H FAB 2G12, heavy chain; 99.0 2.8E-09 9.5E-14 73.7 9.6 86 63-148 6-123 (225)
379 2coq_A NEW antigen receptor va 99.0 4.5E-09 1.5E-13 64.6 9.5 74 60-133 3-87 (108)
380 3sbw_C Programmed cell death 1 99.0 4E-09 1.4E-13 72.3 10.3 88 65-153 9-120 (222)
381 3nl4_H Antigen binding fragmen 99.0 4.8E-09 1.6E-13 71.9 10.6 85 63-147 5-114 (215)
382 4gjt_B Poliovirus receptor-rel 99.0 2.7E-09 9.2E-14 67.2 8.6 86 64-149 7-118 (123)
383 1ccz_A Protein (CD58); LFA-3, 99.0 6.7E-10 2.3E-14 74.0 6.1 109 14-144 59-167 (171)
384 1eeq_A Kappa-4 immunoglobulin 99.0 2.3E-09 7.9E-14 66.5 8.1 75 60-134 4-99 (114)
385 1hxm_B Gamma-delta T-cell rece 99.0 5E-09 1.7E-13 73.3 10.7 77 58-134 2-102 (242)
386 3kg5_A B-cell antigen receptor 99.0 6.2E-09 2.1E-13 66.6 10.2 94 59-153 20-124 (134)
387 3d9a_H Heavy chain of hyhel10 99.0 1.8E-09 6.1E-14 73.8 8.1 84 63-147 6-112 (210)
388 3moq_A NEW antigen receptor va 99.0 7.6E-09 2.6E-13 65.5 10.3 78 59-136 2-90 (126)
389 2fbj_H IGA-kappa J539 FAB (hea 99.0 1E-09 3.5E-14 75.8 6.7 83 56-139 122-212 (220)
390 1pew_A JTO2, A lambda-6 type i 99.0 2E-09 7E-14 66.2 7.4 71 64-134 7-94 (109)
391 3esu_F Antibody 14B7* light ch 99.0 6E-10 2E-14 78.1 5.6 76 58-133 132-231 (250)
392 2znx_A SCFV; fluorotryptohpan, 99.0 1.8E-09 6.1E-14 75.5 7.8 78 61-138 126-228 (242)
393 3liz_H 4C3 monoclonal antibody 99.0 9.2E-10 3.1E-14 77.6 6.3 127 17-147 81-219 (253)
394 2fbj_H IGA-kappa J539 FAB (hea 99.0 8.5E-09 2.9E-13 71.1 11.0 86 63-148 6-118 (220)
395 1hnf_A CD2; T lymphocyte adhes 99.0 1.4E-09 4.9E-14 73.2 6.8 81 66-149 8-105 (182)
396 1dn0_B IGM-kappa cold agglutin 99.0 4.6E-09 1.6E-13 73.1 9.7 129 16-147 79-226 (232)
397 1x9q_A SCFV, 4M5.3 anti-fluore 99.0 1.8E-09 6E-14 76.7 7.5 94 56-149 14-128 (268)
398 4ei6_B Vbeta16 XV19 type II na 99.0 2.7E-09 9.3E-14 74.5 8.3 75 58-133 3-97 (245)
399 1hzh_H IGG, immunoglobulin hea 99.0 3E-10 1E-14 86.4 3.6 90 56-146 131-227 (457)
400 1nko_A Sialic acid binding IG- 99.0 5.6E-09 1.9E-13 66.4 8.9 92 61-152 10-131 (132)
401 3bkj_L WO2 IGG2A FAB fragment 98.9 2.4E-10 8.2E-15 80.4 2.4 83 56-138 149-241 (252)
402 1neu_A Myelin P0 protein; stru 98.9 3.9E-09 1.3E-13 66.1 7.8 87 64-150 6-121 (124)
403 1sq2_N Novel antigen receptor; 98.9 7E-09 2.4E-13 64.3 8.8 75 60-134 3-88 (113)
404 2h32_A Immunoglobulin IOTA cha 98.9 2.4E-09 8.3E-14 67.8 6.8 92 64-155 7-122 (126)
405 2j6e_L IGM, FAB light chain; a 98.9 7E-10 2.4E-14 76.8 4.7 78 58-136 21-115 (234)
406 3bae_H WO2 IGG2A FAB fragment 98.9 2.2E-09 7.4E-14 74.4 7.1 87 56-143 129-221 (228)
407 1dlf_L Anti-dansyl immunoglobu 98.9 5.6E-09 1.9E-13 64.7 8.3 75 60-134 4-98 (113)
408 1dr9_A B7-1 (CD80), T lymphocy 98.9 2.1E-09 7.2E-14 72.8 6.9 83 67-150 4-108 (201)
409 1q9r_B S25-2 FAB (IGG1K) heavy 98.9 4.3E-09 1.5E-13 72.4 8.5 86 63-148 6-122 (222)
410 2oyp_A Hepatitis A virus cellu 98.9 2.1E-09 7.2E-14 65.8 6.2 82 66-147 3-107 (109)
411 1u3h_A T-cell receptor alpha-c 98.5 9.1E-11 3.1E-15 72.6 0.0 73 62-134 4-93 (110)
412 3bqu_C 3H6 FAB light chain; be 98.9 7.3E-10 2.5E-14 76.8 4.6 118 16-137 94-224 (233)
413 2ny1_B T-cell surface glycopro 98.9 2.6E-10 8.9E-15 76.3 2.2 70 67-136 5-92 (184)
414 3omz_A Human vdelta1 gamma del 98.9 8.4E-10 2.9E-14 77.9 4.9 78 57-134 136-231 (259)
415 3r0n_A Poliovirus receptor-rel 98.9 5.6E-09 1.9E-13 65.9 8.3 83 64-146 9-128 (128)
416 3bqu_C 3H6 FAB light chain; be 98.9 2.7E-10 9.1E-15 79.0 2.2 81 57-137 23-118 (233)
417 3bae_H WO2 IGG2A FAB fragment 98.9 4E-09 1.4E-13 73.1 8.2 74 63-136 6-104 (228)
418 2rgs_A I, IG gamma-2B heavy ch 98.9 6.8E-10 2.3E-14 76.6 4.2 84 55-138 7-102 (218)
419 2or8_A Hepatitis A virus cellu 98.9 4.2E-09 1.4E-13 65.3 7.4 83 66-148 6-111 (116)
420 1n26_A IL-6 receptor alpha cha 98.9 1.7E-09 5.9E-14 79.0 6.4 83 67-154 16-99 (325)
421 1ncn_A T lymphocyte activation 98.9 7.1E-09 2.4E-13 63.8 8.2 75 67-143 4-100 (110)
422 2jju_A Signal regulatory prote 98.9 1.1E-08 3.8E-13 64.7 9.3 75 61-135 7-97 (127)
423 1dee_B IGM RF 2A2; FAB-IBP com 98.9 1.3E-08 4.3E-13 70.4 10.2 86 63-148 6-121 (223)
424 3m8o_H Immunoglobulin A1 heavy 98.9 5.5E-09 1.9E-13 71.9 8.3 118 17-139 83-214 (221)
425 1za6_B IGG heavy chain; immuno 98.9 7.4E-10 2.5E-14 81.3 4.1 121 16-140 80-209 (344)
426 3o3u_N Maltose-binding peripla 98.9 7.8E-10 2.7E-14 86.5 4.4 86 67-154 376-475 (581)
427 3uzq_A Anti-dengue MAB 4E11; d 98.9 3.9E-09 1.3E-13 74.2 7.5 88 61-148 5-117 (253)
428 2ptt_A CD48 antigen; CD244, CD 98.9 5.5E-09 1.9E-13 64.3 7.3 81 65-148 11-108 (110)
429 1tvd_A T cell receptor, ES204 98.9 9.6E-09 3.3E-13 63.9 8.4 74 61-134 4-98 (116)
430 3umt_A SCFV heavy chain and li 98.9 9.2E-09 3.1E-13 72.4 9.2 86 63-148 8-121 (256)
431 2wbj_D OB TCR; transmembrane, 98.9 8.9E-09 3E-13 73.5 9.2 78 57-134 24-122 (279)
432 2wqr_A IG epsilon chain C regi 98.9 7.4E-10 2.5E-14 80.6 3.6 83 55-137 217-309 (323)
433 2gjj_A A21 single-chain antibo 98.9 6.9E-09 2.4E-13 73.6 8.5 72 63-134 144-239 (264)
434 1pz5_B Heavy chain of FAB (SYA 98.9 8.4E-09 2.9E-13 70.9 8.5 86 63-148 6-120 (220)
435 3bp6_A Programmed cell death p 98.9 5.1E-08 1.7E-12 60.7 11.4 88 61-148 3-113 (117)
436 1x9q_A SCFV, 4M5.3 anti-fluore 98.9 6.7E-09 2.3E-13 73.7 8.1 73 62-134 156-254 (268)
437 1c5d_H Monoclonal antibody aga 98.9 7.4E-09 2.5E-13 71.1 8.1 86 63-148 6-117 (215)
438 4i0k_A CD276 antigen; immunogl 98.9 2.5E-10 8.4E-15 78.5 0.6 100 67-167 5-126 (222)
439 2xqy_G A13-D6.3 monoclonal ant 98.9 1.1E-08 3.7E-13 72.6 8.8 86 63-148 12-124 (261)
440 1mju_H Immunoglobulin MS6-12; 98.9 1.3E-08 4.5E-13 70.5 8.9 86 63-148 6-116 (227)
441 3nl4_H Antigen binding fragmen 98.9 6.1E-10 2.1E-14 76.4 2.0 125 17-145 77-211 (215)
442 1oaq_L Light chain; antibody, 98.9 1.9E-08 6.6E-13 62.9 8.6 85 66-150 9-112 (120)
443 2vol_A Murine IGG FC; FC, zinc 98.9 2.8E-09 9.5E-14 72.8 5.1 85 53-137 105-197 (207)
444 2yz1_A Tyrosine-protein phosph 98.9 1.5E-08 5.1E-13 63.3 8.0 77 59-135 9-101 (120)
445 1olz_A Semaphorin 4D; developm 98.8 3E-09 1E-13 84.5 5.7 99 65-167 541-645 (663)
446 3bik_B Programmed cell death p 98.8 1.2E-07 4.2E-12 60.5 12.1 91 60-150 12-125 (134)
447 2nms_A CMRF35-like-molecule 1; 98.8 9.3E-08 3.2E-12 60.2 11.3 91 64-154 9-117 (124)
448 1nez_G T-cell surface glycopro 98.8 3.5E-08 1.2E-12 62.6 9.3 79 56-134 3-107 (128)
449 4dzb_B Vbeta2 (MAIT T cell rec 98.8 5.5E-10 1.9E-14 78.1 1.0 122 16-139 78-222 (246)
450 3fku_X Neutralizing antibody F 98.8 1.2E-08 4E-13 73.0 7.9 74 60-134 4-101 (280)
451 2edo_A CD48 antigen; beta-sand 98.8 3.2E-09 1.1E-13 66.7 4.2 86 66-153 13-115 (121)
452 1igt_B IGG2A intact antibody - 98.8 2.1E-09 7.1E-14 81.4 3.9 124 16-144 80-215 (444)
453 2dru_A Chimera of CD48 antigen 98.8 1.1E-08 3.6E-13 68.7 6.9 83 66-151 8-107 (180)
454 3q5y_A TCR N15 beta; IG, T cel 98.8 2.4E-08 8.2E-13 69.5 8.9 74 59-133 4-96 (240)
455 3bn9_D E2 FAB heavy chain; ant 98.8 2.2E-08 7.6E-13 70.9 8.8 74 63-136 6-103 (257)
456 3pl6_D MBP peptide / T-cell re 98.8 2.6E-08 8.8E-13 70.5 9.1 90 58-148 27-138 (268)
457 1iga_A IGA1; immunoglobulin; N 98.8 3.9E-08 1.3E-12 75.2 10.6 84 54-137 346-443 (475)
458 2or7_A T-cell immunoglobulin a 98.8 1.5E-08 5.2E-13 62.8 6.9 86 64-149 4-111 (115)
459 1op3_H FAB 2G12, heavy chain; 98.8 3.7E-09 1.3E-13 73.1 4.3 82 57-139 128-216 (225)
460 1hzh_H IGG, immunoglobulin hea 98.8 2.7E-08 9.1E-13 75.7 9.4 74 63-136 6-103 (457)
461 3kgr_A LAIR-1, hlair1, leukocy 98.8 3E-08 1E-12 60.7 7.9 91 56-148 8-103 (106)
462 2otu_A FV light chain variable 98.8 8.4E-08 2.9E-12 59.5 9.9 72 64-135 8-99 (115)
463 3eow_R Poliovirus receptor; im 98.8 1.4E-09 4.8E-14 74.8 1.8 88 66-153 8-120 (221)
464 1iga_A IGA1; immunoglobulin; N 98.8 4.9E-08 1.7E-12 74.7 10.6 87 62-148 6-122 (475)
465 1bec_A 14.3.D T cell antigen r 98.8 5.6E-08 1.9E-12 67.7 10.0 74 61-135 3-95 (238)
466 2qhl_A Novel immune-type recep 98.8 7.4E-09 2.5E-13 63.9 4.9 71 64-134 6-98 (111)
467 2rgs_A I, IG gamma-2B heavy ch 98.8 1.4E-09 4.7E-14 75.0 1.7 85 53-137 113-205 (218)
468 3t0v_A Immunoglobulin variable 98.8 4.3E-08 1.5E-12 61.7 8.5 77 58-135 2-95 (123)
469 2i24_N NEW antigen receptor PB 98.8 7.4E-08 2.5E-12 60.5 9.5 74 60-133 3-87 (121)
470 3q5y_A TCR N15 beta; IG, T cel 98.8 5.6E-09 1.9E-13 72.7 4.6 120 16-137 76-213 (240)
471 1c5d_H Monoclonal antibody aga 98.8 9.2E-09 3.1E-13 70.6 5.6 123 16-142 79-210 (215)
472 1ypz_E T cell receptor delta, 98.8 6.7E-08 2.3E-12 66.1 9.9 74 61-135 5-94 (207)
473 2gki_A Nuclease; anti-DNA anti 98.8 4.7E-08 1.6E-12 70.3 9.5 74 62-135 27-124 (291)
474 2vol_A Murine IGG FC; FC, zinc 98.8 5.4E-09 1.8E-13 71.4 4.4 70 69-138 15-94 (207)
475 2xqy_G A13-D6.3 monoclonal ant 98.8 8.3E-09 2.8E-13 73.2 5.4 125 16-144 86-221 (261)
476 3m8o_H Immunoglobulin A1 heavy 98.8 5.6E-08 1.9E-12 66.8 9.2 85 63-147 6-118 (221)
477 1fo0_B Protein (BM3.3 T cell r 98.8 1.7E-08 5.9E-13 62.4 6.0 74 60-134 4-96 (112)
478 2atp_B T-cell surface glycopro 98.8 3.2E-08 1.1E-12 61.3 7.1 71 63-133 4-100 (115)
479 3qhz_H Human monoclonal antibo 98.8 3.6E-09 1.2E-13 73.5 3.0 91 55-146 130-227 (232)
480 2hp4_A T-cell surface glycopro 98.7 5E-08 1.7E-12 60.5 7.9 75 60-134 3-99 (114)
481 2z35_A T-cell receptor alpha-c 98.7 4E-08 1.4E-12 60.6 7.4 71 62-132 5-92 (112)
482 1igt_B IGG2A intact antibody - 98.7 5.9E-08 2E-12 73.4 9.7 86 63-148 6-118 (444)
483 3pl6_D MBP peptide / T-cell re 98.7 4.1E-09 1.4E-13 74.6 3.1 120 16-137 101-241 (268)
484 1fo0_A Protein (BM3.3 T cell r 98.7 5.5E-08 1.9E-12 60.4 7.8 72 62-133 5-95 (116)
485 3qib_D 2B4 beta chain; IG doma 98.7 7.8E-08 2.7E-12 68.1 9.5 76 58-134 28-123 (270)
486 1dn0_B IGM-kappa cold agglutin 98.7 9.9E-08 3.4E-12 66.3 9.6 71 63-133 6-99 (232)
487 1hxm_B Gamma-delta T-cell rece 98.7 4E-09 1.4E-13 73.8 2.3 77 68-146 143-227 (242)
488 3o3u_N Maltose-binding peripla 98.7 2.8E-08 9.6E-13 77.7 7.2 117 14-137 431-566 (581)
489 3tv3_H PGT128 heavy chain, IG 98.7 6.6E-09 2.2E-13 72.6 3.2 91 55-146 138-235 (239)
490 1p4b_L Antibody variable light 98.7 5.2E-08 1.8E-12 62.4 7.2 70 66-135 14-101 (135)
491 3to4_D NKT vbeta2 (mouse varia 98.7 3.3E-08 1.1E-12 69.5 6.4 74 62-136 6-98 (253)
492 4ei6_B Vbeta16 XV19 type II na 98.7 8.2E-09 2.8E-13 72.0 3.1 120 16-137 77-219 (245)
493 1sy6_A T-cell surface glycopro 98.7 1E-08 3.4E-13 70.1 3.1 56 69-133 15-70 (204)
494 3noi_A Natural cytotoxicity tr 98.7 6.7E-08 2.3E-12 60.4 6.6 72 63-134 13-103 (120)
495 3qib_D 2B4 beta chain; IG doma 98.7 8.1E-09 2.8E-13 73.2 2.6 121 16-138 102-245 (270)
496 4esk_A LAIR-1, mlair1, leukocy 98.6 2.7E-07 9.3E-12 56.1 8.7 85 57-146 9-99 (102)
497 4ety_A LAIR-1, mlair1, leukocy 98.6 1.3E-07 4.3E-12 59.1 7.3 88 57-149 9-102 (118)
498 1l6x_A Immunoglobulin gamma-1 98.6 5.4E-08 1.9E-12 66.3 6.1 81 58-138 2-94 (207)
499 1hkf_A NKP44, NK cell activati 98.6 5E-07 1.7E-11 56.7 10.0 74 62-135 15-107 (122)
500 3r8b_B G5-8, enterotoxin type 98.6 9.5E-07 3.2E-11 55.6 11.3 76 59-134 7-101 (125)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.87 E-value=6.5e-21 Score=118.45 Aligned_cols=96 Identities=28% Similarity=0.478 Sum_probs=84.1
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-CeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..||.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+... ++.+...++...|.|.++...|+|.|+|.|.|
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 46899999999999999999999999999999999999999998763 44444556667899999999999999999999
Q ss_pred CCcceEEEEEEEEeeCC
Q psy12421 134 KHGTDETNCVVIVESEE 150 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p 150 (168)
..|....++.|.|.++|
T Consensus 91 ~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCEEEEEEEEEEEcCC
Confidence 99999999999998764
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.84 E-value=1.1e-19 Score=111.44 Aligned_cols=94 Identities=21% Similarity=0.486 Sum_probs=82.4
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC---CeEEEecCCEEEEEEccCCCCCCeEEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
..||.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+... ++.+...++..+|.|.++...|+|.|+|.|
T Consensus 3 ~~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 3knb_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEE
Confidence 35788888888899999999999999999999999999999998653 355555666778999999999999999999
Q ss_pred EeCCcceEEEEEEEEee
Q psy12421 132 TNKHGTDETNCVVIVES 148 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v~~ 148 (168)
.|..|....++.|.|..
T Consensus 83 ~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 83 GNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EECCCEEEEEEEEEEEE
Confidence 99999999999998864
No 3
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.81 E-value=1.2e-18 Score=109.05 Aligned_cols=101 Identities=17% Similarity=0.343 Sum_probs=86.9
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .++.+........|.|.++...|+|.|+|.|.|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 578888888889999999999999999999999999999988765 3455554455668999999999999999999999
Q ss_pred CcceEEEEEEEEeeCCCchhhh
Q psy12421 135 HGTDETNCVVIVESEEESKEQQ 156 (168)
Q Consensus 135 ~g~~~~~~~l~v~~~p~~~~~~ 156 (168)
.|.....+.|.|.+.|.++..+
T Consensus 86 ~g~~~~~~~l~V~~~p~~P~~p 107 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDKPDPPAGT 107 (114)
T ss_dssp SCEEECCEEEEEECSCSCCCCC
T ss_pred CCcEEEEEEEEEECCCCCCCCC
Confidence 9999999999999887766543
No 4
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.80 E-value=4.5e-18 Score=104.46 Aligned_cols=96 Identities=29% Similarity=0.588 Sum_probs=83.8
Q ss_pred ccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 54 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
+..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .++.+....+...|.|.++...|+|.|.|.|.
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 84 (103)
T 3qp3_A 5 LDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCT 84 (103)
T ss_dssp TCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEE
Confidence 34578898888899999999999999999999999999999998865 34555555666789999999999999999999
Q ss_pred eCCcceEEEEEEEEeeC
Q psy12421 133 NKHGTDETNCVVIVESE 149 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~ 149 (168)
|..|.....+.|.|...
T Consensus 85 N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 85 NYKGEASDYATLDVTGG 101 (103)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred eCCCcEEEEEEEEEECC
Confidence 99999999999988754
No 5
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=7.6e-18 Score=106.08 Aligned_cols=98 Identities=21% Similarity=0.319 Sum_probs=82.8
Q ss_pred cccCCCeEEee---cCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEE
Q psy12421 53 TVESAPNFTFL---LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 53 ~~~~~p~~~~~---~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 129 (168)
.+..+|.|... .....+.+|+.+.|.|.+.|.|.|.+.|++++..+...+..+........|.|.++...|+|.|+|
T Consensus 17 ~v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 96 (118)
T 2e7c_A 17 EIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYEL 96 (118)
T ss_dssp CCSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEE
T ss_pred eeccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEE
Confidence 34456777542 456789999999999999999999999999999987555555556666679999999999999999
Q ss_pred EEEeCCcceEEEEEEEEeeCC
Q psy12421 130 VATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 130 ~a~n~~g~~~~~~~l~v~~~p 150 (168)
.|.|..|.....+.|.|.+.|
T Consensus 97 ~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 97 SVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEECSSCEECCEEEEEEECCC
T ss_pred EEEeCCCeEEEEEEEEEEcCC
Confidence 999999999999999998765
No 6
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.78 E-value=1.5e-17 Score=101.26 Aligned_cols=93 Identities=23% Similarity=0.374 Sum_probs=79.9
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC-eEE-EecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD-YSM-SYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
.+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ... ....+...|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 46888888888999999999999999999999999999999887543 222 2245666899999999999999999999
Q ss_pred CCcceEEEEEEEEee
Q psy12421 134 KHGTDETNCVVIVES 148 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~ 148 (168)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999999888888864
No 7
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.78 E-value=9.5e-18 Score=103.62 Aligned_cols=98 Identities=28% Similarity=0.463 Sum_probs=82.5
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-CeEEEecCCEEEEEEccCCCCCCeEEEEEE
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
....+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ++.+...+....|.|.++...|+|.|.|.|
T Consensus 9 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 88 (107)
T 3irg_B 9 DQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp -CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEE
Confidence 3456889988888899999999999999999999999999999988653 344444555668999999999999999999
Q ss_pred EeCCcceEEEEEEEEeeCC
Q psy12421 132 TNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v~~~p 150 (168)
.|..|.....+.|.|.++|
T Consensus 89 ~n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 89 RNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EETTEEEEEEEEEEEEC--
T ss_pred EcCCCcEEEEEEEEEEcCC
Confidence 9999999999999988754
No 8
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.77 E-value=2.5e-17 Score=100.28 Aligned_cols=94 Identities=24% Similarity=0.476 Sum_probs=82.0
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .++.+....+...|.|.++...|+|.|.|.|.|
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 83 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKN 83 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEe
Confidence 4578888888889999999999999999999999999999998865 445555556666899999999999999999999
Q ss_pred CCcceEEEEEEEEee
Q psy12421 134 KHGTDETNCVVIVES 148 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~ 148 (168)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 84 SAGSVSSSCKLTIKA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEeEEEEEEEEe
Confidence 999998888888763
No 9
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.77 E-value=1.9e-17 Score=100.89 Aligned_cols=93 Identities=20% Similarity=0.451 Sum_probs=79.6
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC--eEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD--YSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... +.....++...|.|.++...|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 47888888888999999999999999999999999999999886532 3333345556799999999999999999999
Q ss_pred CCcceEEEEEEEEee
Q psy12421 134 KHGTDETNCVVIVES 148 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~ 148 (168)
..|.....+.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999998888888864
No 10
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.76 E-value=6.9e-18 Score=101.86 Aligned_cols=89 Identities=28% Similarity=0.352 Sum_probs=75.8
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--RELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+.... ..........|.|.++...|+|.|+|.|.|.
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 80 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL-LVDAKSSTTSIFFPSAKRADSGNYKLKVKNE 80 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS-EEEEETTEEEEECTTBCGGGCEEEEEEEEET
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE-EEEecCCEEEEEECCCChhcCEEEEEEEEcC
Confidence 577776777788999999999999999999999999999 7776543 3334455568999999999999999999999
Q ss_pred CcceEEEEEEEE
Q psy12421 135 HGTDETNCVVIV 146 (168)
Q Consensus 135 ~g~~~~~~~l~v 146 (168)
.|.....+.|.|
T Consensus 81 ~G~~~~~~~l~V 92 (93)
T 1wit_A 81 LGEDEAIFEVIV 92 (93)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCeEEEEEEEEE
Confidence 999888888876
No 11
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.76 E-value=1.5e-17 Score=101.50 Aligned_cols=94 Identities=24% Similarity=0.455 Sum_probs=79.5
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC--eEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD--YSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... .......+...|.|.++...|+|.|+|.|.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 46777777788899999999999999999999999999998876532 2333455556899999999999999999999
Q ss_pred CCcceEEEEEEEEeeC
Q psy12421 134 KHGTDETNCVVIVESE 149 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~ 149 (168)
..|.....+.|.|...
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9999999999988754
No 12
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.76 E-value=2.9e-17 Score=108.19 Aligned_cols=103 Identities=23% Similarity=0.475 Sum_probs=84.2
Q ss_pred ecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-CeEEEe-cCCEEEEEEccCCCCCCeEEEE
Q psy12421 52 ETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-DYSMSY-SDGVVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 52 ~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C 129 (168)
..+..+|.|...+....+..|+.+.|.|.+.|.|.|.+.|++++..+... ++.+.. ..+...|.|.++...|+|.|+|
T Consensus 36 ~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 115 (154)
T 1fhg_A 36 EKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTC 115 (154)
T ss_dssp CCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEE
T ss_pred ccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEE
Confidence 34556899998888999999999999999999999999999999988664 333332 3445689999999999999999
Q ss_pred EEEeCCcceEEEEEEEEeeCCCchh
Q psy12421 130 VATNKHGTDETNCVVIVESEEESKE 154 (168)
Q Consensus 130 ~a~n~~g~~~~~~~l~v~~~p~~~~ 154 (168)
.|.|..|.....+.|.|..+|....
T Consensus 116 ~a~N~~G~~~~~~~l~V~~~p~~~~ 140 (154)
T 1fhg_A 116 KAVNSLGEATCTAELLVETMGKEGE 140 (154)
T ss_dssp EEEETTEEEEEEEEEEEECC-----
T ss_pred EEEECCCeEEEEEEEEEeCcCcCCC
Confidence 9999999999999999988775544
No 13
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=1.2e-17 Score=103.78 Aligned_cols=99 Identities=22% Similarity=0.484 Sum_probs=83.8
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC--CCeEEEec-CCEEEEEEccCCCCCCeEEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK--RDYSMSYS-DGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~--~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
..+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .++.+... ++...|.|.++...|+|.|+|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 4578888888888999999999999999999999999999988764 33444333 45567999999999999999999
Q ss_pred EeCCcceEEEEEEEEeeCCCch
Q psy12421 132 TNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
.|..|.....+.|.|...+..+
T Consensus 86 ~N~~g~~~~~~~l~V~~~~~~P 107 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAVNSGP 107 (110)
T ss_dssp ECTTCCEEECCCEEEECCSCCS
T ss_pred EECCCeEEEEEEEEEECCCCCC
Confidence 9999999888999998877654
No 14
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=2.4e-17 Score=100.70 Aligned_cols=94 Identities=23% Similarity=0.397 Sum_probs=79.3
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ........++ .|.|.++...|+|.|+|.|.|
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~n 83 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQG--TLQIKNLRISDTGTYTCVATS 83 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTC--CEEEESCCTTTCCEEEEEEEC
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCC--EEEEccCCcccCEEEEEEEEc
Confidence 4688998888889999999999999999999999999999987763 2222233344 699999999999999999999
Q ss_pred CCcceEEEEEEEEeeCC
Q psy12421 134 KHGTDETNCVVIVESEE 150 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p 150 (168)
..|.....+.|.|.++|
T Consensus 84 ~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 84 SSGETSWSAVLDVTESG 100 (100)
T ss_dssp SSCCCBCCEEEEEESCC
T ss_pred CCCCEEEEEEEEEecCC
Confidence 99999889999887654
No 15
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.75 E-value=3.7e-17 Score=102.76 Aligned_cols=99 Identities=25% Similarity=0.416 Sum_probs=84.0
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC--CCeEEEec-CCEEEEEEccCCCCCCeEEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK--RDYSMSYS-DGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~--~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .++.+... .+...|.|.++...|+|.|+|.|
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 4578888888999999999999999999999999999999998864 34444333 34557999999999999999999
Q ss_pred EeCCcceEEEEEEEEeeCCCch
Q psy12421 132 TNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
.|..|.....+.|.|..+|..+
T Consensus 93 ~N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 93 VNEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp EETTEEEEEEEEEEEECCSCCC
T ss_pred EcCCCeEEEEEEEEEeCCCCCC
Confidence 9999999999999998876543
No 16
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.74 E-value=6.5e-17 Score=98.46 Aligned_cols=93 Identities=22% Similarity=0.485 Sum_probs=79.2
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC---CCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK---RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .++.+........|.|.++...|+|.|+|.|.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 467777777778899999999999999999999999999998853 34555555555689999999999999999999
Q ss_pred eCCcceEEEEEEEEee
Q psy12421 133 NKHGTDETNCVVIVES 148 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~ 148 (168)
|..|.....+.|.|..
T Consensus 84 n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEEEEEEEEEEe
Confidence 9999988888888764
No 17
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=101.37 Aligned_cols=91 Identities=30% Similarity=0.546 Sum_probs=77.5
Q ss_pred ccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 54 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
+..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+....... ..+...|.|.++...|+|.|.|.|.|
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~N 85 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC--EAGVAELHIQDALPEDHGTYTCLAEN 85 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEE--ETTEEEEEECSCCTTCCBCEEEEEEC
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEe--eCCeEEEEECCCChhhCEEEEEEEEE
Confidence 3467888888888999999999999999999999999999998776544322 34455899999999999999999999
Q ss_pred CCcceEEEEEEEE
Q psy12421 134 KHGTDETNCVVIV 146 (168)
Q Consensus 134 ~~g~~~~~~~l~v 146 (168)
..|.....+.|.|
T Consensus 86 ~~g~~~~~~~l~V 98 (99)
T 2yr3_A 86 ALGQVSCSAWVTV 98 (99)
T ss_dssp SSCEEEEECCEEE
T ss_pred CCCeEEEEEEEEE
Confidence 9999888877766
No 18
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=8.4e-18 Score=104.43 Aligned_cols=100 Identities=24% Similarity=0.458 Sum_probs=84.3
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC-eE-EEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD-YS-MSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
..+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... .. ....++...|.|.++...|+|.|+|.|.
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 457899888888999999999999999999999999999998776532 22 2333445689999999999999999999
Q ss_pred eCCcceEEEEEEEEeeCCCchh
Q psy12421 133 NKHGTDETNCVVIVESEEESKE 154 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~p~~~~ 154 (168)
|..|.....+.|.|..+|..+.
T Consensus 87 n~~g~~~~~~~l~V~~~p~~P~ 108 (110)
T 2dm3_A 87 NRAGQNSFSLELVVAAKESGPS 108 (110)
T ss_dssp CSSCEEEECCEEEEECCCCSSS
T ss_pred CCCCEEEEEEEEEEeCCCCCCC
Confidence 9999999999999988776653
No 19
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=1e-17 Score=105.45 Aligned_cols=109 Identities=21% Similarity=0.320 Sum_probs=87.2
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC--CCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK--RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .++. ...++ .|.|.++..+|+|.|+|.|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~-~~~~~--~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIK-QLENG--VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEE-EEETT--EEEEESCCGGGCCCEEEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEE-EccCC--EEEEccCCcCCCEEEEEEEE
Confidence 4578888888889999999999999999999999999999987753 2333 23455 79999999999999999999
Q ss_pred eCCcceEEEEEEEEeeCCCchhhhhhhhhcccCC
Q psy12421 133 NKHGTDETNCVVIVESEEESKEQQELAHNFLYSG 166 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g 166 (168)
|..|.....+.|.|...+.+........-.+.+|
T Consensus 83 n~~g~~~~~~~l~V~~~~~p~~~~~~~~~~~~~G 116 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPS 116 (118)
T ss_dssp CSSCEEEEECCEEEECCSCCCCCCCCCCCCCCCC
T ss_pred cCCCcEEEEEEEEEEeCCCCccCCCCCCCccCCC
Confidence 9999998889999987765544444444444444
No 20
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=3.3e-17 Score=100.39 Aligned_cols=93 Identities=16% Similarity=0.180 Sum_probs=78.8
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+|.|...+.+..+.+|+++.|.|.+ .|.|.+.|+|+|..+.. .++.+...+..+.|.|.++..+|+|.|+|.|.|
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 346788888889999999999999999 79999999999999865 445555556667899999999999999999999
Q ss_pred CCcceEEEEEEEEeeCCC
Q psy12421 134 KHGTDETNCVVIVESEEE 151 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~ 151 (168)
. ....++.|.|.++|.
T Consensus 83 ~--~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 83 Y--NVTLPAKVHVISGPS 98 (100)
T ss_dssp S--CCCEEEEEEEECCSC
T ss_pred C--CeeEEEEEEEeCCCC
Confidence 8 556778888888765
No 21
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.72 E-value=5e-16 Score=94.27 Aligned_cols=90 Identities=26% Similarity=0.484 Sum_probs=76.3
Q ss_pred EEeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcc
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT 137 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 137 (168)
+...+.+..+.+|+.+.|.|.+.|. |.|.+.|++++..+.. .++.+...++...|.|.++...|+|.|.|.|.|..|.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGE 83 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCe
Confidence 3445667889999999999999997 9999999999998865 3455545666678999999999999999999999999
Q ss_pred eEEEEEEEEeeC
Q psy12421 138 DETNCVVIVESE 149 (168)
Q Consensus 138 ~~~~~~l~v~~~ 149 (168)
....+.|.|.+.
T Consensus 84 ~~~~~~l~V~~~ 95 (97)
T 2bk8_A 84 DSSYAELFVKGV 95 (97)
T ss_dssp EEEEEEEEETTT
T ss_pred EeEEEEEEEEec
Confidence 999888888653
No 22
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.72 E-value=2.8e-16 Score=94.93 Aligned_cols=89 Identities=17% Similarity=0.146 Sum_probs=73.8
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+|.|...+.+..+.+|+++.|.|.+.+ +.|.+.|+|+|..+.. .++.+...+..+.|.|.++..+|+|.|+|.|.|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 35788888999999999999999999976 5688999999999865 455555566667899999999999999999987
Q ss_pred CCcceEEEEEEEEee
Q psy12421 134 KHGTDETNCVVIVES 148 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~ 148 (168)
. ..++.|.|.+
T Consensus 82 ~----~~sa~L~V~~ 92 (93)
T 1waa_A 82 T----KSAANLKVKE 92 (93)
T ss_dssp E----EEEEEEEEEC
T ss_pred C----cEEEEEEEEc
Confidence 4 4566777754
No 23
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.72 E-value=3e-17 Score=101.55 Aligned_cols=97 Identities=26% Similarity=0.520 Sum_probs=69.2
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-CeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+... ........+ .|.|.++..+|+|.|.|.|.|
T Consensus 8 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~a~n 85 (108)
T 3kvq_A 8 RVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNR--NLTIRRVRKEDEGLYTCQACS 85 (108)
T ss_dssp ---CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTT--EEEECSCCGGGCEEEEEEEC-
T ss_pred cCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCc--EEEEeecCcccCEEEEEEEEe
Confidence 45788887888899999999999999999999999999999877653 333332333 799999999999999999999
Q ss_pred CCcceEEEEEEEEeeCCCch
Q psy12421 134 KHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~~~ 153 (168)
..|.....+.|.|...+..+
T Consensus 86 ~~g~~~~~~~l~V~~~~~~~ 105 (108)
T 3kvq_A 86 VLGCAKVEAFFIIEGAQEKT 105 (108)
T ss_dssp ---CEEEEEEEEEEC-----
T ss_pred CCCceEEEEEEEEeCCCccc
Confidence 99999999999998876544
No 24
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.70 E-value=5e-17 Score=100.55 Aligned_cols=94 Identities=21% Similarity=0.385 Sum_probs=80.7
Q ss_pred ccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 54 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
...+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .++.+........|.|.++...|+|.|+|.|.
T Consensus 11 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 11 TTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp SSCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCB
T ss_pred CCCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEE
Confidence 34678898899999999999999999999999999999999987754 34455444455689999999999999999999
Q ss_pred eCCcceEEEEEEEEe
Q psy12421 133 NKHGTDETNCVVIVE 147 (168)
Q Consensus 133 n~~g~~~~~~~l~v~ 147 (168)
|..|....++.|.|.
T Consensus 91 N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 91 NSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CSSCBCCEEEEEEEC
T ss_pred eCCCeEEEEEEEEEE
Confidence 999998888888774
No 25
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.69 E-value=1.6e-15 Score=102.45 Aligned_cols=126 Identities=22% Similarity=0.269 Sum_probs=94.2
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEe--
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK-- 93 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-- 93 (168)
.+.+.++...|.|. |. +.+.+. ..........+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++
T Consensus 57 ~L~i~~~~~~d~G~--Y~---C~~~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~ 130 (190)
T 2wv3_A 57 EYRINKPRAEDSGE--YH---CVYHFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKE 130 (190)
T ss_dssp EEEESSCCGGGCEE--EE---EEEEET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEE
T ss_pred EEEEecCCcccCEE--EE---EEEEeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcC
Confidence 45566777777555 42 233332 22222333455678999888888889999999999999999999999999
Q ss_pred CCEECC----CCCeEEEecCCEEEEEEccCC-CCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 94 GNRELS----KRDYSMSYSDGVVSMEIIDCK-PEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 94 ~~~~~~----~~~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
++..+. ..++.+........|.|.++. ..|+|.|+|.|.|..|....++.|.|.
T Consensus 131 ~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 131 NGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp TTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 777653 344555545555679999999 799999999999999999988888775
No 26
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.69 E-value=1.5e-16 Score=103.12 Aligned_cols=84 Identities=25% Similarity=0.335 Sum_probs=69.9
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCeeEEEeCC----------------------------EECC--CCCeEEEecCCEEE
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN----------------------------RELS--KRDYSMSYSDGVVS 113 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~----------------------------~~~~--~~~~~~~~~~~~~~ 113 (168)
+.+..+.+|+++.|.|.+.|.|.|.+.|+|++ ..+. ..++.+...+....
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 44578899999999999999999999999998 4442 23444444555568
Q ss_pred EEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 114 MEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 114 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
|.|.++...|+|.|+|.|.|..|....++.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999999988888875
No 27
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.68 E-value=4.2e-16 Score=105.38 Aligned_cols=92 Identities=29% Similarity=0.526 Sum_probs=78.7
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
.+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+.. ..+.+...+....|.|.++...|+|.|+|.|.|.
T Consensus 102 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 181 (194)
T 2a38_A 102 APPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNS 181 (194)
T ss_dssp EEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEET
T ss_pred CCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeC
Confidence 577777777788899999999999999999999999999998865 3444555556667999999999999999999999
Q ss_pred CcceEEEEEEEEe
Q psy12421 135 HGTDETNCVVIVE 147 (168)
Q Consensus 135 ~g~~~~~~~l~v~ 147 (168)
.|.....+.|.|.
T Consensus 182 ~g~~~~~~~l~V~ 194 (194)
T 2a38_A 182 VGRATSTAELLVQ 194 (194)
T ss_dssp TEEEEEEEEEEEC
T ss_pred CCceEEEEEEEEC
Confidence 9998888888763
No 28
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.68 E-value=3.2e-16 Score=96.42 Aligned_cols=81 Identities=16% Similarity=0.317 Sum_probs=66.4
Q ss_pred cCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeE-E--EecC-C--EEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 71 VRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYS-M--SYSD-G--VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 71 ~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~-~--~~~~-~--~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
.+..+.|.|.+.|.|.|.+.|++++..+...... . ...+ . ...|.|.++..+|+|.|+|.|.|..|....++.|
T Consensus 15 ~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l 94 (103)
T 1wwb_X 15 SDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISA 94 (103)
T ss_dssp CCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred ECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEE
Confidence 5778999999999999999999999988765422 1 1111 1 2249999999999999999999999999999999
Q ss_pred EEeeCCC
Q psy12421 145 IVESEEE 151 (168)
Q Consensus 145 ~v~~~p~ 151 (168)
.|.+.|.
T Consensus 95 ~V~~~P~ 101 (103)
T 1wwb_X 95 HFMGWPG 101 (103)
T ss_dssp CCSCCCC
T ss_pred EECCCCC
Confidence 9987764
No 29
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.67 E-value=5.8e-16 Score=93.72 Aligned_cols=88 Identities=22% Similarity=0.397 Sum_probs=73.3
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
..+|.|...+....+.+|+.+.|.|.+.|.| |.+.|++++..+...... ...++ .|.|.++...|+|.|.|.|.|.
T Consensus 7 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~-~~~~~--~L~i~~~~~~D~G~Y~C~a~n~ 82 (95)
T 2ckn_A 7 AQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRT-RITGE--EVEVRDSIPADSGLYACVTSSP 82 (95)
T ss_dssp SCSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSE-EECSS--EEEESSCCGGGSEEEEEEEEET
T ss_pred CCCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCE-EEeCC--EEEECCCChHHCEEEEEEeccC
Confidence 3567777778888999999999999999987 899999999887653322 22344 7999999999999999999999
Q ss_pred CcceEEEEEEEE
Q psy12421 135 HGTDETNCVVIV 146 (168)
Q Consensus 135 ~g~~~~~~~l~v 146 (168)
.|.....+.|.|
T Consensus 83 ~g~~~~~~~l~V 94 (95)
T 2ckn_A 83 SGSDTTYFSVNV 94 (95)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 999888887776
No 30
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=7e-16 Score=94.63 Aligned_cols=94 Identities=19% Similarity=0.359 Sum_probs=78.4
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..||.|...+.+..+.+|+.+.|.|.+.+ |.+.+.|++++..+.. .++.+...+....|.|.++...|+|.|+|.|.|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 45788888888899999999999999987 8889999999988755 345555555566899999999999999999998
Q ss_pred CCcceEEEEEEEEeeCCCch
Q psy12421 134 KHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~~~ 153 (168)
....+.|.|..+|..+
T Consensus 85 ----~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 85 ----SKSTASLHVEEKASGP 100 (103)
T ss_dssp ----CEEEEEEEECCCSSSS
T ss_pred ----CCcEEEEEEeCCCCCC
Confidence 3677888888777654
No 31
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.67 E-value=8e-16 Score=114.86 Aligned_cols=125 Identities=22% Similarity=0.304 Sum_probs=94.8
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN 95 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~ 95 (168)
.|.+.++...|.|. | .+...+............+..+|.+...+.+..+..|+.+.|.|.+.|.|.|.+.|++++
T Consensus 259 ~L~I~~v~~~D~G~--Y---~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g 333 (384)
T 3kld_A 259 ILEIPNFQQEDAGS--Y---ECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNG 333 (384)
T ss_dssp EEEECSCCGGGCEE--E---EEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETT
T ss_pred EEEECCCChhhCEE--E---EEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECC
Confidence 45566777777555 3 233334333333333334456788888888889999999999999999999999999999
Q ss_pred EECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 96 RELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
..+....... ..++ .|.|.++..+|+|.|+|.|.|..|...+++.|.|..
T Consensus 334 ~~l~~~~~~~-~~~~--~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 334 DPLLTRDRIQ-IEQG--TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp EECCCBTTEE-EETT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EECCCCccEE-EeCC--EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 9886533222 2445 799999999999999999999999999999998853
No 32
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.66 E-value=3.2e-16 Score=106.28 Aligned_cols=128 Identities=17% Similarity=0.202 Sum_probs=88.1
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEE-----eecCCeEEecCCcEEEEEEEeccCCCeeE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFT-----FLLRPRVMQVRQTCKLLCCLSGKPPPTVK 90 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-----~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 90 (168)
.+.+.++...|.+. |.|. +.+............+..+|.+. ..+....+.+|+.+.|.|.+.|.|.|.+.
T Consensus 63 ~L~i~~~~~~d~G~--Y~C~---~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 137 (197)
T 2j8h_A 63 QLIIASVTDDDATV--YQVR---ATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVIT 137 (197)
T ss_dssp EEEECSCCGGGCSE--EEEE---EEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEE
T ss_pred EEEECcCCHHhCEE--EEEE---EEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEE
Confidence 46666777777665 4322 22222111121222222333332 22344678889999999999999999999
Q ss_pred EEeCCEECCC-CCeEEEecCCEEEEEEcc-CCCCCCeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 91 WYKGNRELSK-RDYSMSYSDGVVSMEIID-CKPEDSGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 91 W~~~~~~~~~-~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
|++++..+.. .++.+........|.|.+ +...|+|.|+|.|.|..|.....+.|.|.+
T Consensus 138 W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 138 WQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp EEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 9999988754 344444455556899999 999999999999999999998888888753
No 33
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.66 E-value=2.1e-15 Score=118.02 Aligned_cols=131 Identities=22% Similarity=0.322 Sum_probs=101.5
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR 96 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~ 96 (168)
|.+.++...|.|. | .+...+............+..+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 349 L~i~~v~~~D~G~--Y---~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~ 423 (570)
T 3b43_A 349 LEMYNLSVEDSGD--Y---TCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKR 423 (570)
T ss_dssp EEEESCCGGGCEE--E---EEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTE
T ss_pred EEECCCCcccCEE--E---EEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCE
Confidence 4455666677554 4 3344444443333344566778999888888889999999999999999999999999999
Q ss_pred ECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCc
Q psy12421 97 ELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 97 ~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 152 (168)
.+.. .++.+...+....|.|.++...|+|.|+|.|.|..|.....+.|.|..+|..
T Consensus 424 ~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~ 480 (570)
T 3b43_A 424 ELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRF 480 (570)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEE
T ss_pred ECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcc
Confidence 8865 3455555555568999999999999999999999999999999998876643
No 34
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.66 E-value=9.5e-16 Score=90.85 Aligned_cols=80 Identities=25% Similarity=0.410 Sum_probs=65.3
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
+.+..+.+|+.+.|.|.+.+ |.|.+.|+|+|..+.. .++.+...++...|.|.++...|+|.|+|.| |....++
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----~n~~~~a 77 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDA----PQDSRIF 77 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEEC----TTTCEEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEE----CCEEEEE
Confidence 34577889999999999866 9999999999999876 4455555666678999999999999999987 4456677
Q ss_pred EEEEee
Q psy12421 143 VVIVES 148 (168)
Q Consensus 143 ~l~v~~ 148 (168)
.|.|.+
T Consensus 78 ~l~V~e 83 (84)
T 2lu7_A 78 LVSVEE 83 (84)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 787765
No 35
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.66 E-value=1.2e-15 Score=93.59 Aligned_cols=91 Identities=19% Similarity=0.281 Sum_probs=74.4
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC---CeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
|+.|...+.+..+.+|+++.|.|.+.+ |.+.+.|++++..+... ++.+...+....|.|.++..+|+|.|+|.|.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 344777788889999999999999988 77999999999988653 44555555666899999999999999999987
Q ss_pred CCcceEEEEEEEEeeCCCc
Q psy12421 134 KHGTDETNCVVIVESEEES 152 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~~ 152 (168)
....+.|.|...|.+
T Consensus 86 ----~~~~~~l~V~~~p~p 100 (103)
T 1x44_A 86 ----GQSSAKLSVDLKSGP 100 (103)
T ss_dssp ----EEEEEEEEEECCCSC
T ss_pred ----CcEEEEEEEeCCCCC
Confidence 566778888877654
No 36
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.65 E-value=2.5e-15 Score=103.25 Aligned_cols=95 Identities=28% Similarity=0.520 Sum_probs=76.6
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcc
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT 137 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 137 (168)
|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+..........++ .|.|.++...|+|.|+|.|.|..|.
T Consensus 111 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~ 188 (212)
T 2yd1_A 111 PVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDG--FLQIENSREEDQGKYECVAENSMGT 188 (212)
T ss_dssp CEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETT--EEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCC--eEEEccCChhhCEEEEEEeecCCCc
Confidence 78887787888999999999999999999999999999988653222233455 7999999999999999999999999
Q ss_pred eEEE-EEEEEeeCCCchh
Q psy12421 138 DETN-CVVIVESEEESKE 154 (168)
Q Consensus 138 ~~~~-~~l~v~~~p~~~~ 154 (168)
.... +.|.|......+.
T Consensus 189 ~~s~~~~l~V~~~~~~~~ 206 (212)
T 2yd1_A 189 EHSKATNLYVKVRRVGTK 206 (212)
T ss_dssp EECCCEEEEEEC---C--
T ss_pred eeEEEEEEEEEecccccc
Confidence 8765 7899987765544
No 37
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.65 E-value=1.7e-15 Score=108.15 Aligned_cols=126 Identities=22% Similarity=0.321 Sum_probs=93.6
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR 96 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~ 96 (168)
+.+.++...|.+. | .+.+.+............+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 157 L~i~~~~~~d~G~--Y---~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~ 231 (284)
T 2rik_A 157 LEMYNLSVEDSGD--Y---TCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKR 231 (284)
T ss_dssp EEECSCCGGGCEE--E---EEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTE
T ss_pred EEECCCCcccCEE--E---EEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCE
Confidence 3344555556443 3 2233333332223333455567888777777889999999999999999999999999999
Q ss_pred ECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 97 ELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 97 ~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
.+.. ..+.+...+....|.|.++...|+|.|+|.|.|..|.....+.|.|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 232 ELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 8765 34555555556689999999999999999999999999999888875
No 38
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=1.4e-15 Score=93.37 Aligned_cols=93 Identities=19% Similarity=0.312 Sum_probs=74.6
Q ss_pred CCCeEEeecCC---eEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEE
Q psy12421 56 SAPNFTFLLRP---RVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 56 ~~p~~~~~~~~---~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
.+|.+...+.. ..+.+|+.+.|.|.+.+.|.+ +.|++++..+.. .++.+...+....|.|.++...|+|.|+|.+
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 84 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT 84 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEEC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEE
Confidence 45666666666 688999999999999999999 999999998865 3455555566668999999999999999999
Q ss_pred EeCCcceEEEEEEEEeeCCCch
Q psy12421 132 TNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
.|..+ .+.|.|.++|.++
T Consensus 85 ~n~~~----~~~l~V~~~P~pp 102 (104)
T 2e6p_A 85 EGVSA----FFGVTVQDPSGPS 102 (104)
T ss_dssp SSCCC----CEEEEEECCCCSS
T ss_pred CCceE----EEEEEEcCCCCCc
Confidence 98743 5677777776543
No 39
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.65 E-value=1.2e-15 Score=92.90 Aligned_cols=88 Identities=28% Similarity=0.518 Sum_probs=70.2
Q ss_pred CCeEEeec----CCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC----eEEEecCCEEEEEEccCCCCCCeEEE
Q psy12421 57 APNFTFLL----RPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD----YSMSYSDGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 57 ~p~~~~~~----~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~----~~~~~~~~~~~l~i~~~~~~d~G~Y~ 128 (168)
+|.|...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ........ .|.|.++...|+|.|+
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~ 81 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHW--SLIMESVVPSDKGNYT 81 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGT--EEEECSCCGGGCEEEE
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeE--EEEEccCCcCCCEEEE
Confidence 56665433 34678899999999999999999999999999875421 22222333 7999999999999999
Q ss_pred EEEEeCCcceEEEEEEEE
Q psy12421 129 CVATNKHGTDETNCVVIV 146 (168)
Q Consensus 129 C~a~n~~g~~~~~~~l~v 146 (168)
|.|.|..|.....+.|.|
T Consensus 82 C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 82 CVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEEETTEEEEEEEEEEE
T ss_pred EEEEeCCCEEEEEEEEEE
Confidence 999999999888888776
No 40
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.65 E-value=2.5e-15 Score=95.25 Aligned_cols=82 Identities=12% Similarity=0.281 Sum_probs=67.7
Q ss_pred cCCcEEEEEEEeccCCCeeEEEeCCEECCCCCe-EEEecC-------CEEEEEEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 71 VRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDY-SMSYSD-------GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 71 ~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~-~~~~~~-------~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
.+..+.|.|.+.|.|.|.+.|+|+|..+..... ...... ....|.|.++...|+|.|+|.|.|..|...+++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 567899999999999999999999999976442 222111 134799999999999999999999999999999
Q ss_pred EEEEeeCCCc
Q psy12421 143 VVIVESEEES 152 (168)
Q Consensus 143 ~l~v~~~p~~ 152 (168)
.|.|...|..
T Consensus 94 ~l~v~~~P~~ 103 (126)
T 1he7_A 94 MAAFMDNPFE 103 (126)
T ss_dssp EECCCSCTTS
T ss_pred EEEEEcCCCC
Confidence 9998877754
No 41
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.65 E-value=5.3e-15 Score=90.22 Aligned_cols=91 Identities=24% Similarity=0.422 Sum_probs=76.2
Q ss_pred CCCeEEeecCC-eEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 56 SAPNFTFLLRP-RVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 56 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
.+|.|...+.+ ..+.+|+++.|.|.+. .|.|.+.|++++..+.. .++.+...+....|.|.++..+|+|.|.|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 47888877777 6788999999999998 69999999999988755 4555555566668999999999999999999
Q ss_pred CCcceEEEEEEEEeeCCC
Q psy12421 134 KHGTDETNCVVIVESEEE 151 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~ 151 (168)
|....++.|.|.++|.
T Consensus 83 --g~~~~~~~l~V~~~P~ 98 (100)
T 2yuv_A 83 --GDEKCSTELFVRSGPS 98 (100)
T ss_dssp --TTEEEEEEEEECCSCC
T ss_pred --CCceEEEEEEEecCCC
Confidence 7778888999987763
No 42
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.64 E-value=3.6e-15 Score=89.43 Aligned_cols=85 Identities=19% Similarity=0.350 Sum_probs=70.6
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
.++.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... .. .|.|.++...|+|.|.|.|.|..
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~------~~--~L~i~~v~~~d~G~Y~C~a~n~~ 73 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET------KK--LYMVPYVDLEHQGTYWCHVYNDR 73 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC------SS--EEEESSCCGGGCEEEEEEEECSS
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC------CC--eEEECCCCHHhCEEEEEEEEcCC
Confidence 35677778888899999999999999999999999999998876532 12 79999999999999999999999
Q ss_pred cceE-EEEEEEEee
Q psy12421 136 GTDE-TNCVVIVES 148 (168)
Q Consensus 136 g~~~-~~~~l~v~~ 148 (168)
|... ..+.|.|.+
T Consensus 74 g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 74 DSQDSKKVEIIIDE 87 (91)
T ss_dssp CEEECCCEEEEEC-
T ss_pred CCEEeeeEEEEEeh
Confidence 9754 456666643
No 43
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.64 E-value=3.1e-15 Score=92.60 Aligned_cols=91 Identities=22% Similarity=0.354 Sum_probs=71.0
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCC---CeeEEEeCCEEC-C---CCCeEEEe---c---CCEEEEEEccCCCCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPP---PTVKWYKGNREL-S---KRDYSMSY---S---DGVVSMEIIDCKPED 123 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~---p~i~W~~~~~~~-~---~~~~~~~~---~---~~~~~l~i~~~~~~d 123 (168)
.|.|...+.+..+.+|+++.|.|.+.|.|. |.+.|+|++... . ..++.+.. . .....|.|.+++.+|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 467777888889999999999999999998 999999987321 1 11222211 0 113479999999999
Q ss_pred CeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 124 SGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 124 ~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
+|.|.|.|.|..|...+.+.|.|.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999999999998875
No 44
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.64 E-value=9.9e-15 Score=99.89 Aligned_cols=90 Identities=26% Similarity=0.435 Sum_probs=74.3
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-CeEEEec-CCEEEEEEccCCCCCCeEEEEEEEeCCc
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-DYSMSYS-DGVVSMEIIDCKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 136 (168)
.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ++.+... ++...|.|.++...|.|.|+|.|.|..|
T Consensus 119 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g 198 (212)
T 2r15_A 119 VLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYG 198 (212)
T ss_dssp EEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred ccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCC
Confidence 3333444578899999999999999999999999999988653 3444433 4556899999999999999999999999
Q ss_pred ceEEEEEEEEee
Q psy12421 137 TDETNCVVIVES 148 (168)
Q Consensus 137 ~~~~~~~l~v~~ 148 (168)
.....+.|.|..
T Consensus 199 ~~~~~~~l~V~~ 210 (212)
T 2r15_A 199 SETSDFTVSVFI 210 (212)
T ss_dssp EEEEEEEEEEEC
T ss_pred cEEEEEEEEEEc
Confidence 999898888864
No 45
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.64 E-value=1.6e-15 Score=102.37 Aligned_cols=127 Identities=24% Similarity=0.295 Sum_probs=91.2
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcc-eeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPL-QITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN 95 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~ 95 (168)
+.+.++...|.|. |. +.+.+.... ........+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++
T Consensus 64 L~i~~~~~~d~G~--Y~---C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~ 138 (192)
T 2iep_A 64 LTILSVEDSDDGI--YC---CTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGD 138 (192)
T ss_dssp EEESSCCGGGCEE--EE---EEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETT
T ss_pred EEEcCCCcccCeE--EE---EEEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCC
Confidence 5566677777554 42 233332222 12222234456788877777888999999999999999999999999999
Q ss_pred EECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceE-EEEEEEEeeCC
Q psy12421 96 RELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE-TNCVVIVESEE 150 (168)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~p 150 (168)
..+...........+ .|.|.++...|+|.|+|.|.|..|... ..+.|.|..+|
T Consensus 139 ~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 139 SALRENSRIAVLESG--SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp EECCCCSSEEECTTS--CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEccCCCcEEEecCC--cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 988764433333444 699999999999999999999999874 46788887654
No 46
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=2.5e-15 Score=95.36 Aligned_cols=97 Identities=20% Similarity=0.338 Sum_probs=74.8
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEecc---CCCeeEEEeCCEEC----CCCCeEEE--ecC----CEEEEEEccCCCCCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGK---PPPTVKWYKGNREL----SKRDYSMS--YSD----GVVSMEIIDCKPEDS 124 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~---p~p~i~W~~~~~~~----~~~~~~~~--~~~----~~~~l~i~~~~~~d~ 124 (168)
|.|...+++..+.+|+.+.|.|.+.|. |.|.+.|||+.... ...++.+. ... ....|.|.++...|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 456677888999999999999999875 89999999974211 01233321 111 135799999999999
Q ss_pred eEEEEEEEeCCcceEEEEEEEEee-CCCchh
Q psy12421 125 GEYKCVATNKHGTDETNCVVIVES-EEESKE 154 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~l~v~~-~p~~~~ 154 (168)
|.|+|.|.|..|...+.+.|.|.. ++..+.
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~~~~~~p~ 118 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHESTGTTPN 118 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEECCCCSCCC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEecCCCCCe
Confidence 999999999999999999999998 555444
No 47
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.63 E-value=1.8e-15 Score=112.99 Aligned_cols=127 Identities=23% Similarity=0.280 Sum_probs=95.2
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR 96 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~ 96 (168)
+.+.++...|.+. | .+.+.+............+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 277 L~i~~~~~~d~G~--Y---~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~ 351 (403)
T 3laf_A 277 LLISNVTDDDSGT--Y---TCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGD 351 (403)
T ss_dssp EEECSCCGGGCEE--E---EEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTE
T ss_pred EEEeCCCHHHCEE--E---EEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCE
Confidence 4555566666544 3 2233333332233333344567888888888889999999999999999999999999999
Q ss_pred ECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCC
Q psy12421 97 ELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 97 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
.+..........++ .|.|.++...|+|.|+|.|.|..|....++.|.|.++|
T Consensus 352 ~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 352 VVIPSDYFQIVGGS--NLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp ECCCSSSEEEETTT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred ECCCCCcEEEecCc--cEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 88665444344445 79999999999999999999999999999999987754
No 48
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.63 E-value=1.1e-14 Score=100.40 Aligned_cols=100 Identities=16% Similarity=0.311 Sum_probs=83.8
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC---CeEEEecCCEEEEEEccCCCCCCeEEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
..+|.| ..+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+... ++.+........|.|.++...|+|.|.|.|
T Consensus 17 ~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 17 MYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp CEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEE
T ss_pred ecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEE
Confidence 456777 4666788999999999999999999999999999988653 344444455668999999999999999999
Q ss_pred EeCCcceEEEEEEEEeeCCCchhh
Q psy12421 132 TNKHGTDETNCVVIVESEEESKEQ 155 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v~~~p~~~~~ 155 (168)
.|..|.....+.|.|...|..+..
T Consensus 96 ~n~~g~~~~~~~l~v~~~P~~p~~ 119 (215)
T 3mtr_A 96 VNRIGQESLEFILVQADTPSSPSI 119 (215)
T ss_dssp ECSSCEEEEEEEEEECCCCCCCEE
T ss_pred EECCCceEEEEEEEECCCCCCCcc
Confidence 999999999999999887776543
No 49
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.63 E-value=4.7e-16 Score=106.93 Aligned_cols=119 Identities=11% Similarity=0.053 Sum_probs=80.3
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR 96 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~ 96 (168)
|.+.+++..|.|. |.| .+.+............+..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 71 L~I~~v~~~D~G~--Y~C---~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~ 145 (203)
T 4fa8_A 71 LVVTAANISHDGN--YLC---RMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEG 145 (203)
T ss_dssp EEESSCCGGGCEE--EEE---EEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC--
T ss_pred EEEccCCHHHCeE--EEE---EEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCe
Confidence 5566677778665 432 33343333333333455567788777777888899999999999999999999998765
Q ss_pred ECCC-----CCeEEEecCC-EEEEEEccCCCCCCeEEEEEEEeCCcceEEE
Q psy12421 97 ELSK-----RDYSMSYSDG-VVSMEIIDCKPEDSGEYKCVATNKHGTDETN 141 (168)
Q Consensus 97 ~~~~-----~~~~~~~~~~-~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 141 (168)
.+.. .++. ...++ ...+.+.++..+|+|.|+|.|.|..|..+..
T Consensus 146 ~~~~~~~~~~r~~-~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 146 VEPAPTAANGGVM-KEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp ----------CCE-ECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred eecCcccccceEE-EeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 4421 2222 22333 3346667899999999999999999987753
No 50
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=4.8e-16 Score=95.13 Aligned_cols=91 Identities=19% Similarity=0.294 Sum_probs=73.7
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-----CeEEEecCCEEEEEEccCCCCCCeEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-----DYSMSYSDGVVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-----~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 129 (168)
..+|.|...+.+..+.+|+++.|.|.+.+.| +.+.|++++..+... ++.+...+....|.|.++..+|+|.|+|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 84 (101)
T 2edk_A 6 SGPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQV 84 (101)
T ss_dssp CCCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEE
T ss_pred cCCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEE
Confidence 3567888888889999999999999999988 999999999887653 4455555666689999999999999999
Q ss_pred EEEeCCcceEEEEEEEEeeCC
Q psy12421 130 VATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 130 ~a~n~~g~~~~~~~l~v~~~p 150 (168)
.|.| ....+.|.|.++|
T Consensus 85 ~a~n----~~~~~~l~V~~~P 101 (101)
T 2edk_A 85 ITNG----GQCEAELIVEEKQ 101 (101)
T ss_dssp ECSS----CEECCBEEEECCC
T ss_pred EEcC----CcEEEEEEEeCCC
Confidence 9987 3445667776553
No 51
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=1.7e-15 Score=93.36 Aligned_cols=92 Identities=15% Similarity=0.282 Sum_probs=75.4
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCC-CeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPP-PTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
.+|.|...+.+..+.+|+++.|.|.+.+.|. +.+.|+|++..+.. .++.+...+....|.|.++..+|+|.|+|.|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~- 85 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVR- 85 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEET-
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEEC-
Confidence 4567777888899999999999999998775 48999999988754 45555556666789999999999999999874
Q ss_pred CCcceEEEEEEEEeeCCC
Q psy12421 134 KHGTDETNCVVIVESEEE 151 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~ 151 (168)
....++.|.|.++|.
T Consensus 86 ---~~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 86 ---GLTSKASLIVRERSG 100 (104)
T ss_dssp ---TEEEEECEEEECCCS
T ss_pred ---CeeEEEEEEEeCCCc
Confidence 456788899988764
No 52
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.62 E-value=6.7e-15 Score=99.42 Aligned_cols=94 Identities=30% Similarity=0.503 Sum_probs=80.9
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC---CeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
.+|.|...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+... .+.+...++...|.|.++...|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 4688888888899999999999999999999999999999877643 3455556667789999999999999999999
Q ss_pred eCCcceEEEEEEEEeeC
Q psy12421 133 NKHGTDETNCVVIVESE 149 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~ 149 (168)
|..|.......|.|...
T Consensus 84 n~~~~~~~~~~l~v~~~ 100 (194)
T 2a38_A 84 NGSGQATSTAELLVKAE 100 (194)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred cCCceEeEEEEEEEccC
Confidence 99998888888888753
No 53
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.62 E-value=1e-14 Score=98.57 Aligned_cols=99 Identities=27% Similarity=0.567 Sum_probs=84.0
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..+.+...+....|.|.++...|+|.|+|.+.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 4678888888899999999999999999999999999999988755 444555556666899999999999999999999
Q ss_pred CCcceEEEEEEEEeeCCCch
Q psy12421 134 KHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~~~ 153 (168)
..|.......|.|...|...
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~ 104 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFH 104 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEcCCCCC
Confidence 99998888888887665443
No 54
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.62 E-value=2.7e-15 Score=90.24 Aligned_cols=85 Identities=18% Similarity=0.320 Sum_probs=64.6
Q ss_pred CCeEEeecCCeE--EecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 57 APNFTFLLRPRV--MQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 57 ~p~~~~~~~~~~--~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
||.|.....+.. +.+|+.+.|.|.+.+ |.|.+.|+|+|..+.. .++.+...++.+.|.|.++..+|+|.|+|.|.|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 455554444443 357999999999866 8899999999998865 445666667777899999999999999999855
Q ss_pred CCcceEEEEEEEE
Q psy12421 134 KHGTDETNCVVIV 146 (168)
Q Consensus 134 ~~g~~~~~~~l~v 146 (168)
...++.|.|
T Consensus 83 ----~~~~~~ltV 91 (91)
T 2lvc_A 83 ----ECAYFTVTI 91 (91)
T ss_dssp ----CEEEEEEEC
T ss_pred ----eEEEEEEEC
Confidence 455555543
No 55
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.62 E-value=8.7e-15 Score=100.61 Aligned_cols=94 Identities=26% Similarity=0.499 Sum_probs=74.1
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC----CeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR----DYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
.|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+... ++..........|.|.++...|+|.|+|.|.
T Consensus 108 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 187 (212)
T 2yd6_A 108 FPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVAT 187 (212)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEE
Confidence 377877777888999999999999999999999999999988642 3333334445689999999999999999999
Q ss_pred eCCcceEE-EEEEEEeeCC
Q psy12421 133 NKHGTDET-NCVVIVESEE 150 (168)
Q Consensus 133 n~~g~~~~-~~~l~v~~~p 150 (168)
|..|.... .+.|.|...+
T Consensus 188 N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 188 NSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp ETTEEEECCCEEEEEEC--
T ss_pred CCCCccccccccEEEEecc
Confidence 99998654 5667776554
No 56
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.62 E-value=4.3e-15 Score=102.33 Aligned_cols=88 Identities=22% Similarity=0.461 Sum_probs=73.7
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
+|.|...+ +..+.+|+.+.|.|.+.|. |.|.+.|+|++..+..... +....+...|.|.++..+|+|.|+|.|.|..
T Consensus 117 ~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 194 (207)
T 3rbs_A 117 GPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK-HDFKDGICTLLITEFSKKDAGIYEVILKDDR 194 (207)
T ss_dssp SSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCC-CCCSSEEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCc-eEcCCCEEEEEECCCCcccCEEEEEEEEcCC
Confidence 78887666 4788899999999999998 9999999999998865332 2223445579999999999999999999999
Q ss_pred cceEEEEEEEE
Q psy12421 136 GTDETNCVVIV 146 (168)
Q Consensus 136 g~~~~~~~l~v 146 (168)
|...+++.|..
T Consensus 195 G~~~~~~~L~~ 205 (207)
T 3rbs_A 195 GKDKSRLKLVD 205 (207)
T ss_dssp EEEEEEEEECC
T ss_pred CEEEEEEEEec
Confidence 99999888764
No 57
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.61 E-value=6.8e-15 Score=115.11 Aligned_cols=126 Identities=21% Similarity=0.350 Sum_probs=96.3
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR 96 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~ 96 (168)
+.+.++...|.|. | .+...+............+..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 442 L~i~~v~~~D~G~--Y---~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~ 516 (570)
T 3b43_A 442 IHILNVDSADIGE--Y---QCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKG 516 (570)
T ss_dssp EEECSCCGGGCEE--E---EEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTE
T ss_pred EEECCCChhhCEE--E---EEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCe
Confidence 3455566666444 3 3444454444444444566789999988888889999999999999999999999999986
Q ss_pred ECCC--CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 97 ELSK--RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 97 ~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
.+.. .+..+...++...|.|.++...|+|.|+|.|.|..|...+++.|.|.
T Consensus 517 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 517 EIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp ECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred EeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 5532 33444444556689999999999999999999999999999998875
No 58
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.61 E-value=1e-14 Score=91.41 Aligned_cols=94 Identities=24% Similarity=0.453 Sum_probs=71.0
Q ss_pred ccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC-----eEEEecCCEEEEEEc-----cCCCCC
Q psy12421 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD-----YSMSYSDGVVSMEII-----DCKPED 123 (168)
Q Consensus 54 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-----~~~~~~~~~~~l~i~-----~~~~~d 123 (168)
+..+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ......++ .+.+. ++...|
T Consensus 6 ~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~v~~~D 83 (117)
T 2v9t_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSG--SLFFLRIVHGRKSRPD 83 (117)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTS--CEEESSCCCBTTBCSS
T ss_pred ccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCC--cEEEEEEEeCCCCcCc
Confidence 3568899888888999999999999999999999999999999876431 12233333 23333 457899
Q ss_pred CeEEEEEEEeCCcceEE-EEEEEEeeC
Q psy12421 124 SGEYKCVATNKHGTDET-NCVVIVESE 149 (168)
Q Consensus 124 ~G~Y~C~a~n~~g~~~~-~~~l~v~~~ 149 (168)
+|.|.|.|.|..|...+ .+.|.+...
T Consensus 84 ~G~Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 84 EGVYVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEC--
T ss_pred CEEEEEEEEeCccceEeeeEEEEhhhh
Confidence 99999999999998755 556666543
No 59
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=8.5e-15 Score=89.71 Aligned_cols=93 Identities=24% Similarity=0.335 Sum_probs=77.6
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
.+|.|...+.+..+.+|+++.|.|. .+.|.|.+.|++++..+.. .++.+...+....|.|.++..+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~---- 81 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD---- 81 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----
Confidence 4677877888899999999999999 5889999999999988765 345555556667899999999999999997
Q ss_pred CcceEEEEEEEEeeCCCch
Q psy12421 135 HGTDETNCVVIVESEEESK 153 (168)
Q Consensus 135 ~g~~~~~~~l~v~~~p~~~ 153 (168)
.|.....+.|.|...|.++
T Consensus 82 ~g~~~~~~~l~V~~~p~~p 100 (103)
T 2dku_A 82 IGQAQSRAQLLVQGRRSGP 100 (103)
T ss_dssp CSSCBCCEEEEEECSCCCC
T ss_pred eCCceEEEEEEEeCccCCC
Confidence 6777778889998877654
No 60
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.61 E-value=6.9e-15 Score=99.72 Aligned_cols=129 Identities=20% Similarity=0.268 Sum_probs=91.6
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccceecc-----CcceeeEee--ecccCCCeEEeecCCeEEecCCcEEEEEEEeccCC
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQVRRR-----EPLQITFWQ--ETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPP 86 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 86 (168)
...+.+.++...|.+. |.|........ ....+.+.. .....+|.+...+....+..|+.+.|.|.+.|.|.
T Consensus 65 ~~~L~i~~v~~~d~G~--Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 142 (201)
T 3s97_C 65 NGNLYIANVEASDKGN--YSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV 142 (201)
T ss_dssp TCCEEESSCCGGGCEE--EEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESC
T ss_pred CCeEEECcCCcccCeE--EEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCC
Confidence 3457777888888666 43322211111 111111111 11124677777777888999999999999999999
Q ss_pred CeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 87 PTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 87 p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
|.+.|++++..+... ......++ .|.|.++...|+|.|+|.|.|..|....++.|.|.
T Consensus 143 p~v~W~~~~~~~~~~-~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 143 PDIRWRKVLEPMPST-AEISTSGA--VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CEEEEEETTBCCCTT-CEEETTTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CceEEEeCCCcCCCc-eeecCCCC--EEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 999999999876643 23333444 79999999999999999999999999988888875
No 61
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=3e-15 Score=92.30 Aligned_cols=90 Identities=18% Similarity=0.254 Sum_probs=73.0
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+|.|...+.+..+.+|+++.|.|.+.+.|.+ +.|++++..+.. .++.+...+....|.|.++..+|+|.|+|.|.|
T Consensus 6 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (106)
T 2dlt_A 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDG 84 (106)
T ss_dssp CCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEET
T ss_pred CCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEcc
Confidence 457888888999999999999999999998887 999999988754 345555556666899999999999999999999
Q ss_pred CCcceEEEEEEEEe
Q psy12421 134 KHGTDETNCVVIVE 147 (168)
Q Consensus 134 ~~g~~~~~~~l~v~ 147 (168)
..+ ..++.|.|.
T Consensus 85 ~~~--~~~~~l~V~ 96 (106)
T 2dlt_A 85 YAL--SLSAKLNFL 96 (106)
T ss_dssp SCC--CCCBCEEEE
T ss_pred CCc--eEEEEEEEE
Confidence 833 344445544
No 62
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=2.4e-14 Score=89.14 Aligned_cols=91 Identities=12% Similarity=0.116 Sum_probs=74.4
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-----------CeEEEecCCEEEEEEccCCCCCC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-----------DYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-----------~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
.+|.|...+.+..+.+|+.+.|.|.+.+ .|.+.|+|+|..+... ++.+...+..++|.|.++..+|+
T Consensus 7 p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~ 84 (112)
T 2e6q_A 7 GTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDS 84 (112)
T ss_dssp SCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTC
T ss_pred CCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHC
Confidence 3578888999999999999999999987 7889999999998764 33444445567899999999999
Q ss_pred eEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 125 GEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
|.|+|...+ ....++.|.|.++|.
T Consensus 85 G~Y~~~~~~---~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 85 GALVGFSCP---GVQDSAALTIQESSG 108 (112)
T ss_dssp SEEEEEEET---TEEEEEEEEEECSSC
T ss_pred ccEEEEEEC---CeeEEEEEEEeCCCc
Confidence 999886554 445688999988764
No 63
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.60 E-value=3.5e-14 Score=88.42 Aligned_cols=91 Identities=27% Similarity=0.425 Sum_probs=76.0
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
.+|.|...+.+..+.+|+++.|.|.+.+. |.+.|++++..+.. .++.+...+....|.|.++..+|+|.|.|.|
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 92 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC--- 92 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE---
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe---
Confidence 45688888888999999999999999774 78999999988764 4555555666668999999999999999999
Q ss_pred CcceEEEEEEEEeeCCCc
Q psy12421 135 HGTDETNCVVIVESEEES 152 (168)
Q Consensus 135 ~g~~~~~~~l~v~~~p~~ 152 (168)
|.....+.|.|..+|..
T Consensus 93 -~~~~~~~~l~V~~~p~~ 109 (113)
T 2edh_A 93 -GKERTSAMLTVRAMPSG 109 (113)
T ss_dssp -TTEEEEEEEEECCCCCS
T ss_pred -CCCCEEEEEEEeCCCCC
Confidence 77888889999877654
No 64
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.60 E-value=2.7e-14 Score=98.11 Aligned_cols=96 Identities=23% Similarity=0.402 Sum_probs=80.7
Q ss_pred ccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEe--cCCEEEEEEccC-CCCCCeEEEEE
Q psy12421 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSY--SDGVVSMEIIDC-KPEDSGEYKCV 130 (168)
Q Consensus 54 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~--~~~~~~l~i~~~-~~~d~G~Y~C~ 130 (168)
...+|.|...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+......... ......|.|.++ ...|+|.|+|.
T Consensus 3 ~~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 82 (212)
T 2yd6_A 3 GETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECV 82 (212)
T ss_dssp -CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEE
T ss_pred CCCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEE
Confidence 356789998899999999999999999999999999999999988765543322 234557999999 59999999999
Q ss_pred EEeCCcceEEEEEEEEeeC
Q psy12421 131 ATNKHGTDETNCVVIVESE 149 (168)
Q Consensus 131 a~n~~g~~~~~~~l~v~~~ 149 (168)
+.|..|.....+.|.|...
T Consensus 83 a~n~~g~~~~~~~l~V~~~ 101 (212)
T 2yd6_A 83 ASNNVGEISVSTRLTVLRE 101 (212)
T ss_dssp EEETTEEEEEEEEEEEECG
T ss_pred EEcCCCcEEEEEEEEEecc
Confidence 9999999888888888764
No 65
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.60 E-value=1.3e-14 Score=87.70 Aligned_cols=86 Identities=16% Similarity=0.326 Sum_probs=70.9
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
.|.|...+.+..+.+|+++.|.|.+ +.|.+.+.|++++..+.. .++.+...+....|.|.++...|+|.|+|.|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a---- 82 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA---- 82 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----
Confidence 3566677788899999999999999 889999999999987754 4455555566668999999999999999999
Q ss_pred cceEEEEEEEEe
Q psy12421 136 GTDETNCVVIVE 147 (168)
Q Consensus 136 g~~~~~~~l~v~ 147 (168)
|....++.|.|.
T Consensus 83 g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 GSSKVKFDLKVI 94 (95)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCceEEEEEEEe
Confidence 666777777775
No 66
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.60 E-value=8.1e-15 Score=92.07 Aligned_cols=96 Identities=21% Similarity=0.282 Sum_probs=70.9
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC-eEEEecC----CEEEEEEccCCCCCCeEE
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD-YSMSYSD----GVVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~----~~~~l~i~~~~~~d~G~Y 127 (168)
.+..+|.+..... .. ......|.|.+.|.|.|.+.|++++..+.... ....... ....|.|.++...|+|.|
T Consensus 4 ~V~~pP~i~~~~~-~~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 80 (118)
T 1wwc_A 4 TVYYPPRVVSLEE-PE--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNY 80 (118)
T ss_dssp CCCCCCCCCCCCC-CC--CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEE
T ss_pred EEecCCceeccCC-Ce--eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEE
Confidence 3445666543322 11 22557788999999999999999999887643 2222111 234799999999999999
Q ss_pred EEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 128 KCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 128 ~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
+|.|.|..|....++.|.|...|.
T Consensus 81 ~C~a~N~~G~~~~~~~l~v~~~P~ 104 (118)
T 1wwc_A 81 TLIAKNPLGTANQTINGHFLKEPF 104 (118)
T ss_dssp EEEEEETTEEEEEEEEECCSCCCC
T ss_pred EEEEECCCCeEeeEEEEEEccCCC
Confidence 999999999999999988877654
No 67
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.60 E-value=1.7e-14 Score=107.23 Aligned_cols=133 Identities=17% Similarity=0.213 Sum_probs=98.9
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN 95 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~ 95 (168)
.|.+.+++..|.|. |. +.+.+............+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++
T Consensus 64 ~L~i~~v~~~D~G~--Y~---C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g 138 (389)
T 2jll_A 64 SLHIKDVKLSDSGR--YD---CEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDK 138 (389)
T ss_dssp EEEEESCCGGGCEE--EE---EEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETT
T ss_pred eEEEcccChhhCEE--EE---EEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECC
Confidence 56677888888665 43 23333333223333345556788766555457889999999999999999999999999
Q ss_pred EECCCC---CeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCch
Q psy12421 96 RELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 96 ~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
..+... ++.+........|.|.++...|+|.|+|.|.|..|.......|.+...|..+
T Consensus 139 ~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P 199 (389)
T 2jll_A 139 LVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSP 199 (389)
T ss_dssp EESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCC
T ss_pred ccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCC
Confidence 988653 3444444455689999999999999999999999998888888887766655
No 68
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.60 E-value=4e-16 Score=98.67 Aligned_cols=97 Identities=20% Similarity=0.368 Sum_probs=78.9
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCe-eEEEeCCEECCC---CCeEE--EecCC--EEEEEEccCCCCCC
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPT-VKWYKGNRELSK---RDYSM--SYSDG--VVSMEIIDCKPEDS 124 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~~~~~~~~~---~~~~~--~~~~~--~~~l~i~~~~~~d~ 124 (168)
.+..+|.|.. +....+.+|+.+.|.|.+.|.|.|. +.|++++..+.. .++.+ ..... ...|.|.++...|.
T Consensus 10 ~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 88 (122)
T 2cry_A 10 TVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADF 88 (122)
T ss_dssp CCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHH
T ss_pred EEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhC
Confidence 4567888887 7778899999999999999999997 999999887754 33333 12222 45799999999999
Q ss_pred -eEEEEEEEeCCcceEEEEEEEEeeCC
Q psy12421 125 -GEYKCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 125 -G~Y~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
|.|+|.|.|..|.....+.|.|.+.+
T Consensus 89 ~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 115 (122)
T 2cry_A 89 QTIYNCTAWNSFGSDTEIIRLKEQGSE 115 (122)
T ss_dssp HSCEEEEEECSSCEEEEEECCCCSCSS
T ss_pred CceEEEEEECCCCeEEEEEEEEECCCC
Confidence 99999999999999988888887543
No 69
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.59 E-value=1.7e-14 Score=107.07 Aligned_cols=123 Identities=22% Similarity=0.349 Sum_probs=91.6
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR 96 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~ 96 (168)
+.+.++...|.+. | .+.+.+............+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 259 L~i~~~~~~d~G~--Y---~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~ 333 (382)
T 1cs6_A 259 LHIQNVDFEDEGT--Y---ECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQ 333 (382)
T ss_dssp EEECSCCGGGCEE--E---EEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTE
T ss_pred EEEccCChhhCEE--E---EEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCE
Confidence 4455566666444 3 2233333222222233344567888888888889999999999999999999999999999
Q ss_pred ECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 97 ELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 97 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
.+...... ...++ .|.|.++...|+|.|+|.|.|..|....++.|.|.
T Consensus 334 ~~~~~~~~-~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 334 PLASQNRI-EVSGG--ELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp ECCCCSSE-EEETT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ECCCCceE-EEECC--EEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 88764422 22344 79999999999999999999999999999988875
No 70
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.59 E-value=3e-15 Score=104.55 Aligned_cols=92 Identities=20% Similarity=0.361 Sum_probs=67.1
Q ss_pred ecCCeEEecCCcEEEEEEEeccCCCeeEEEe----CCEECCCCCe--EEEe-------cCCEEEEEEccCCCCCCeEEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK----GNRELSKRDY--SMSY-------SDGVVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~----~~~~~~~~~~--~~~~-------~~~~~~l~i~~~~~~d~G~Y~C 129 (168)
.+....+..|+.+.|.|.+.+.|.|.+.|++ ++..+..... .... ......|.|.++...|.|.|+|
T Consensus 120 ~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 199 (241)
T 3grw_A 120 LPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLC 199 (241)
T ss_dssp TTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEE
T ss_pred CCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEE
Confidence 3556778899999999999999999999999 7766643221 1100 1123469999999999999999
Q ss_pred EEEeCCcceEEEEEEEEeeCCCchh
Q psy12421 130 VATNKHGTDETNCVVIVESEEESKE 154 (168)
Q Consensus 130 ~a~n~~g~~~~~~~l~v~~~p~~~~ 154 (168)
.|.|..|....++.|.|.++|..+.
T Consensus 200 ~a~N~~g~~~~~~~l~V~~~p~~~~ 224 (241)
T 3grw_A 200 RATNFIGVAEKAFWLSVHGPRAAEE 224 (241)
T ss_dssp EEECSSCEEEEEEEEEC--------
T ss_pred EEecCcceEEEEEEEEecCCCCCCc
Confidence 9999999999999999988765544
No 71
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.59 E-value=1.8e-14 Score=88.70 Aligned_cols=88 Identities=22% Similarity=0.425 Sum_probs=70.8
Q ss_pred cCCCeEEeecCC-eEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC--CeEEEecCCEEEEEEccCCCCCCeEEEEEE
Q psy12421 55 ESAPNFTFLLRP-RVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR--DYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 55 ~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
..+|.|...+.+ ..+.+|+++.|.|.+ +.|.+.+.|++++..+... ++.+...+....|.|.++..+|+|.|+|.+
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 91 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV 91 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE
Confidence 457788777777 789999999999999 7899999999999887654 455555566678999999999999999999
Q ss_pred EeCCcceEEEEEEEEe
Q psy12421 132 TNKHGTDETNCVVIVE 147 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v~ 147 (168)
|....++.|.|.
T Consensus 92 ----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 92 ----GGEKCSTELFVK 103 (104)
T ss_dssp ----TTEEECCEEEEE
T ss_pred ----CCCcEEEEEEEe
Confidence 445555666654
No 72
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.59 E-value=8.9e-14 Score=95.45 Aligned_cols=96 Identities=21% Similarity=0.477 Sum_probs=80.8
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC--CCeEEEe-cCCEEEEEEccCCC-CCCeEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK--RDYSMSY-SDGVVSMEIIDCKP-EDSGEYKCV 130 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~--~~~~~~~-~~~~~~l~i~~~~~-~d~G~Y~C~ 130 (168)
..+|.|...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+.. .++.+.. .++...|.|.++.. .|+|.|+|.
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 4689999999999999999999999999999999999999998852 3444332 35556899999999 999999999
Q ss_pred EEeCCcc-eEEEEEEEEeeCC
Q psy12421 131 ATNKHGT-DETNCVVIVESEE 150 (168)
Q Consensus 131 a~n~~g~-~~~~~~l~v~~~p 150 (168)
+.|..|. ......|.|...+
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~ 104 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGD 104 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTT
T ss_pred EEeCCCCeEEeeEEEEEeccc
Confidence 9999998 7778888887653
No 73
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.58 E-value=1.9e-14 Score=107.15 Aligned_cols=122 Identities=26% Similarity=0.334 Sum_probs=92.1
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceee-EeeecccCCCeEEeecCC-eEEecCCcEEEEEEEeccCCCeeEEEe
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQIT-FWQETVESAPNFTFLLRP-RVMQVRQTCKLLCCLSGKPPPTVKWYK 93 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~~ 93 (168)
.+.+.++...|.|. |. +.+.+....... .....+..+|.+...+.. ..+.+|+.+.|.|.+.|.|.|.+.|++
T Consensus 271 ~L~i~~~~~~d~G~--Y~---C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~ 345 (395)
T 1bih_A 271 RLLFKTTLPEDEGV--YT---CEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSH 345 (395)
T ss_dssp EEEESSCCGGGCEE--EE---EEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEE
T ss_pred eEEEccCChhhCEE--EE---EEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEE
Confidence 35566667677555 42 233333222221 333355568888877777 788999999999999999999999999
Q ss_pred CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEE
Q psy12421 94 GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 146 (168)
++..+...++.+ .++ .|.|.++...|+|.|+|.|.|..|.....+.|.|
T Consensus 346 ~g~~~~~~~~~~--~~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 346 NAKPLSGGRATV--TDS--GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp TTEECCSSSEEE--ETT--EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEECCCCceEE--ECC--EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 999987664433 344 7999999999999999999999999998888876
No 74
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=5.7e-15 Score=90.00 Aligned_cols=84 Identities=24% Similarity=0.442 Sum_probs=68.1
Q ss_pred CCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 65 RPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 65 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
....+.+|+.+.|.|.+.|.| |.+.|++++..+...... ..... .|.|.++...|+|.|.|.|.|..|.....+.|
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~-~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 86 (99)
T 2cr3_A 11 ESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRT-RITGE--EVEVQDSVPADSGLYACVTSSPSGSDTTYFSV 86 (99)
T ss_dssp EECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSE-EECSS--EEEETTCCTTTCEEEEEEEEETTEEEEEEEEE
T ss_pred cCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcE-EEECC--EEEEccCCHHHCEEEEEEEEeCCceEEEEEEE
Confidence 345677899999999999976 799999999877553322 22344 79999999999999999999999999888888
Q ss_pred EEeeCCCc
Q psy12421 145 IVESEEES 152 (168)
Q Consensus 145 ~v~~~p~~ 152 (168)
.|...+..
T Consensus 87 ~V~~~~~s 94 (99)
T 2cr3_A 87 NVSDALPS 94 (99)
T ss_dssp CBCSCCSC
T ss_pred EEecCCCC
Confidence 88776544
No 75
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.58 E-value=1.1e-14 Score=105.03 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=94.7
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEe-----ecCCeEEecCCcEEEEEEEeccCCCeeE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTF-----LLRPRVMQVRQTCKLLCCLSGKPPPTVK 90 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-----~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 90 (168)
.|.+.++...|.+. |.| .+.+............+..+|.+.. .+....+..|+.+.|.|.+.|.|.|.+.
T Consensus 63 ~L~i~~v~~~d~G~--Y~C---~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 137 (305)
T 2nzi_A 63 QLIIASVTDDDATV--YQV---RATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVIT 137 (305)
T ss_dssp EEEESSCCGGGCSE--EEE---EEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEE
T ss_pred EEEEccCChhhCeE--EEE---EEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEE
Confidence 45666777777555 432 2222222212222223334444432 2245678899999999999999999999
Q ss_pred EEeCCEECCC-CCeEEEecCCEEEEEEcc-CCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCchhh
Q psy12421 91 WYKGNRELSK-RDYSMSYSDGVVSMEIID-CKPEDSGEYKCVATNKHGTDETNCVVIVESEEESKEQ 155 (168)
Q Consensus 91 W~~~~~~~~~-~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~ 155 (168)
|++++..+.. .++.+........|.|.+ +...|.|.|+|.|.|..|....++.|.|...|.++..
T Consensus 138 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~ 204 (305)
T 2nzi_A 138 WQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRG 204 (305)
T ss_dssp EEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEE
T ss_pred EEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCC
Confidence 9999987764 344444444556899999 9999999999999999999999999999888776554
No 76
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.58 E-value=9.1e-15 Score=106.08 Aligned_cols=95 Identities=17% Similarity=0.170 Sum_probs=76.3
Q ss_pred ecccCCCeEEeec-CCeEEecCCcEEEEEEEeccCCC-eeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEE
Q psy12421 52 ETVESAPNFTFLL-RPRVMQVRQTCKLLCCLSGKPPP-TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 52 ~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 129 (168)
..+..+|.+...+ ....+..|+.+.|.|.+.|.|.| .+.|++++..+.... ...++ .|.|.++...|+|.|+|
T Consensus 211 l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~---~~~~~--~L~i~~v~~~d~G~Y~C 285 (313)
T 4fqp_A 211 LTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA---VAQGA--QLLIRPVDKPINTTLIC 285 (313)
T ss_dssp CCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---EEETT--EEEECCCSSCCEEEEEE
T ss_pred cccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce---EEeCC--EEEECcCChhhCEEEEE
Confidence 3556678876544 34566778999999999999999 699999998776532 22344 79999999999999999
Q ss_pred EEEeCCcceEEEEEEEEeeCCC
Q psy12421 130 VATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 130 ~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
.|.|..|....++.|.|.+.|.
T Consensus 286 ~a~N~~G~~~~~~~l~V~~~PP 307 (313)
T 4fqp_A 286 NVTNALGARQAELTVQVKEGPP 307 (313)
T ss_dssp EEECSSCEEEEEEEEEEECCC-
T ss_pred EEEeCCCcEEEEEEEEEEeCCC
Confidence 9999999999999999987653
No 77
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.58 E-value=7.9e-15 Score=89.86 Aligned_cols=92 Identities=26% Similarity=0.482 Sum_probs=76.0
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+|.|...+.+..+.+|+++.|.|.+.+.|.+ +.|++++..+.. .++.+...+....|.|.++...|+|.|.|.
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2e7b_A 6 SGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS--- 81 (103)
T ss_dssp CCCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE---
T ss_pred CCCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE---
Confidence 356778777888999999999999999999999 999999987764 445555556666799999999999999997
Q ss_pred CCcceEEEEEEEEeeCCC
Q psy12421 134 KHGTDETNCVVIVESEEE 151 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~ 151 (168)
.|.....+.|.|..+|.
T Consensus 82 -~g~~~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 82 -FGDQTTSATLTVTALPS 98 (103)
T ss_dssp -CSSCBCCBCEEEECCCC
T ss_pred -ECCcEEEEEEEEEeccc
Confidence 66677778888887664
No 78
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=1.2e-14 Score=91.23 Aligned_cols=94 Identities=22% Similarity=0.320 Sum_probs=72.9
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEecc---CCCeeEEEeCCE-ECC---CCCeEEEe--cC----CEEEEEEccCCCC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGK---PPPTVKWYKGNR-ELS---KRDYSMSY--SD----GVVSMEIIDCKPE 122 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~---p~p~i~W~~~~~-~~~---~~~~~~~~--~~----~~~~l~i~~~~~~ 122 (168)
..+.|...+.+..+.+|+.+.|.|.+.|. |.|.+.|||+.. .+. ..++.+.. .. ....|.|.++...
T Consensus 11 ~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 90 (118)
T 2edn_A 11 PTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLG 90 (118)
T ss_dssp CSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTT
T ss_pred CcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChh
Confidence 34567778888999999999999999885 799999999742 121 12222211 11 1357999999999
Q ss_pred CCeEEEEEEEeCCcceEEEEEEEEeeC
Q psy12421 123 DSGEYKCVATNKHGTDETNCVVIVESE 149 (168)
Q Consensus 123 d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 149 (168)
|+|.|.|.+.|..|..++.+.|.|..+
T Consensus 91 D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp TCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred hCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 999999999999999999999998764
No 79
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=4.7e-14 Score=87.74 Aligned_cols=92 Identities=21% Similarity=0.321 Sum_probs=71.2
Q ss_pred CCCeEEeecCC---eEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEE
Q psy12421 56 SAPNFTFLLRP---RVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 56 ~~p~~~~~~~~---~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
.+|.+...+.. ..+.+|+.+.|.|.+. .|.+.+.|++++..+.. .++.+...+....|.|.++..+|+|.|.|.+
T Consensus 9 ~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 87 (113)
T 2cpc_A 9 DVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEI 87 (113)
T ss_dssp SCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEES
T ss_pred cCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEE
Confidence 34544444444 5678899999999995 78999999999998865 3444444454568999999999999999999
Q ss_pred EeCCcceEEEEEEEEeeCCCc
Q psy12421 132 TNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v~~~p~~ 152 (168)
.| ....+.|.|.++|..
T Consensus 88 ~n----~~~~~~l~V~~~p~~ 104 (113)
T 2cpc_A 88 DD----ESASFTVTVTEPPVR 104 (113)
T ss_dssp SS----CEEEEEEEEECCCCC
T ss_pred ec----CcEEEEEEEecCCch
Confidence 88 556778888877644
No 80
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.58 E-value=8.4e-14 Score=85.93 Aligned_cols=94 Identities=15% Similarity=0.306 Sum_probs=72.0
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEecc--CCCeeEEEeCCEECCCCCeEE--EecC-------CEEEEEEccCCC
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKGNRELSKRDYSM--SYSD-------GVVSMEIIDCKP 121 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~~~~~~~~~~~--~~~~-------~~~~l~i~~~~~ 121 (168)
....+|.|...+....+.+|+.+.|.|.+.+. +.+.+.|++++..+....... .... ....|.|.++..
T Consensus 6 ~~~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 85 (112)
T 3so5_A 6 DDFPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEF 85 (112)
T ss_dssp --CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCG
T ss_pred CCCCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccc
Confidence 34568899888888999999999999999865 468999999999886533110 1110 124799999999
Q ss_pred CCCeEEEEEEEeCCcc-eEEEEEEEE
Q psy12421 122 EDSGEYKCVATNKHGT-DETNCVVIV 146 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~-~~~~~~l~v 146 (168)
.|+|.|.|.|.|..|. ....+.|.|
T Consensus 86 ~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 86 TSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999999998 446666665
No 81
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.58 E-value=1.7e-14 Score=107.59 Aligned_cols=125 Identities=18% Similarity=0.226 Sum_probs=91.3
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR 96 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~ 96 (168)
+.+.++...|.+. | .+.+.+............+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 277 L~i~~~~~~d~G~--Y---~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~ 351 (404)
T 3p3y_A 277 LRITNVSEEDSGE--Y---FCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGE 351 (404)
T ss_dssp EEESSCCGGGCEE--E---EEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTE
T ss_pred EEEccCCHhHCEE--E---EEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCE
Confidence 4445555555444 3 2233333332333333445567888888888899999999999999999999999999999
Q ss_pred ECCCCC--eEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 97 ELSKRD--YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 97 ~~~~~~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
.+.... ......++ .|.|.++...|+|.|+|.|.|..|.....+.|.|.+
T Consensus 352 ~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 352 PLQSAPPNPNREVAGD--TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EGGGSCCCTTEEEETT--EEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ecCCCCCCceEEecCC--EEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 886422 12223344 799999999999999999999999999999888754
No 82
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.58 E-value=1.2e-13 Score=98.59 Aligned_cols=97 Identities=22% Similarity=0.488 Sum_probs=83.8
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..||.|...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+.. ..+.+....+...|.|.++...|+|.|+|.+.|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 3588998899999999999999999999999999999999998865 344444455566899999999999999999999
Q ss_pred CCcceEEEEEEEEeeCCC
Q psy12421 134 KHGTDETNCVVIVESEEE 151 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~ 151 (168)
..|.......|.|..+|.
T Consensus 83 ~~g~~~~~~~l~V~~~p~ 100 (284)
T 2rik_A 83 VAGKDSCSAQLGVQEPPR 100 (284)
T ss_dssp TTEEEEEEEEEEEECCCE
T ss_pred CCceEEEEEEEEccCCCc
Confidence 999988888898887664
No 83
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.58 E-value=1.9e-14 Score=106.97 Aligned_cols=117 Identities=17% Similarity=0.229 Sum_probs=88.7
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN 95 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~ 95 (168)
.+.+.++...|.+. | .+.+.+............+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++
T Consensus 271 ~L~i~~v~~~d~G~--Y---~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g 345 (388)
T 2v5m_A 271 TLIIKDAVVEDSGK--Y---LCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDG 345 (388)
T ss_dssp EEEESSCCGGGCEE--E---EEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETT
T ss_pred EEEECcCCHHHCeE--E---EEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECC
Confidence 34555666666554 3 233333333233333334556777777777888999999999999999999999999999
Q ss_pred EECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEE
Q psy12421 96 RELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146 (168)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 146 (168)
..+... ++ .|.|.++...|+|.|+|.|.|..|....++.|.|
T Consensus 346 ~~i~~~-------~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 346 KAIGHS-------ES--VLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EECSCC-------SS--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EECccC-------CC--EEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 987642 22 7999999999999999999999999999988876
No 84
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.58 E-value=4.1e-14 Score=87.04 Aligned_cols=95 Identities=15% Similarity=0.207 Sum_probs=73.0
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-EC--------CCCCeEEEe-cCCEEEEEEccCCCCCC
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-EL--------SKRDYSMSY-SDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-~~--------~~~~~~~~~-~~~~~~l~i~~~~~~d~ 124 (168)
..+|.+...+.+..+.+|+++.|.|.+.+.|.+.+.|++++. .+ ...++.+.. ..+...|.|.+++.+|+
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 83 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDE 83 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGC
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHC
Confidence 345677778888999999999999999999999999998764 11 112333322 22455899999999999
Q ss_pred eEEEEEEEeCCcceEEEEEEEEeeCC
Q psy12421 125 GEYKCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
|.|.|.+.| .|.......|.|..+|
T Consensus 84 G~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 84 GQYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp EEEEEEECS-SSCEEEEEEEEEECCC
T ss_pred eEEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 999999999 8888888899888754
No 85
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.57 E-value=8.1e-14 Score=94.33 Aligned_cols=96 Identities=27% Similarity=0.519 Sum_probs=81.4
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC--CeEEE-ecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR--DYSMS-YSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
.+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+... ++.+. ..++...|.|.++...|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 5789988888999999999999999999999999999999988653 33332 24556689999999999999999999
Q ss_pred eCCcceEEEEEEEEeeCCC
Q psy12421 133 NKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~p~ 151 (168)
|..|.......|.|..+|.
T Consensus 83 n~~g~~~~~~~l~V~~~p~ 101 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAK 101 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEE
T ss_pred ECCCceeEEEEEEEcCCCc
Confidence 9999988888888876543
No 86
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.57 E-value=3.3e-14 Score=86.25 Aligned_cols=81 Identities=19% Similarity=0.360 Sum_probs=65.3
Q ss_pred ecCCeEEecCCcEEEEEEEe-ccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLS-GKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN 141 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 141 (168)
.+....+.+|+++.|.|.+. +.|.+.+.|++++........ ...++ .|.|.++..+|+|.|.|.+.|..|.....
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~--~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRA--MDFNG--ILTIRNVQPSDAGTYVCTGSNMFAMDQGT 91 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTE--EEETT--EEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCcee--ecCCC--EEEEeCCChhhCEEEEEEecCCCCccccE
Confidence 34556889999999999998 689999999997543333221 22344 79999999999999999999999998888
Q ss_pred EEEEEe
Q psy12421 142 CVVIVE 147 (168)
Q Consensus 142 ~~l~v~ 147 (168)
+.|.|.
T Consensus 92 ~~l~V~ 97 (98)
T 1gl4_B 92 ATLHVQ 97 (98)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 888774
No 87
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.57 E-value=3.3e-14 Score=95.77 Aligned_cols=123 Identities=16% Similarity=0.300 Sum_probs=85.4
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcce-eeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQ-ITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG 94 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~ 94 (168)
.+.+.++...|.|. |.| .+.+..... .......+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++
T Consensus 59 ~L~i~~~~~~d~G~--Y~C---~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~ 133 (189)
T 2v44_A 59 RLTIYNANIEDAGI--YRC---QATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYH 133 (189)
T ss_dssp EEEECSCCGGGCEE--EEE---EEECTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEE
T ss_pred EEEEccCCcccCeE--EEE---EEEeCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEEC
Confidence 46666777777555 432 333322211 222333555678887777778899999999999999999999999999
Q ss_pred CEECC---CCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEE
Q psy12421 95 NRELS---KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146 (168)
Q Consensus 95 ~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 146 (168)
+..+. ..++. ...++ .|.|.++...|+|.|+|.|.|..|.......+.|
T Consensus 134 ~~~~~~~~~~~~~-~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 134 NEEVTTISDNRFA-MLANN--NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp C--CEECCCTTEE-ECTTS--CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred CcEEeccCCCCEE-EecCC--cEEEEEcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 88764 22332 23344 6999999999999999999999977655544443
No 88
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.57 E-value=5e-14 Score=95.12 Aligned_cols=128 Identities=16% Similarity=0.234 Sum_probs=87.7
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEee---cCCeEEecCCcEEEEEEEeccCCCeeEEE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFL---LRPRVMQVRQTCKLLCCLSGKPPPTVKWY 92 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~~~~~~~g~~~~l~C~~~g~p~p~i~W~ 92 (168)
.+.+.++...|.+. |.| .+.+............+..+|.+... .....+..|+.+.|.|.+.|.|.|.+.|+
T Consensus 64 ~L~i~~~~~~d~G~--Y~C---~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~ 138 (197)
T 3lcy_A 64 TLTVMTEEQEDEGV--YTC---IATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWF 138 (197)
T ss_dssp EEEEECCSGGGCEE--EEE---EEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEE
T ss_pred EEEEecCCccCCEE--EEE---EEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEe
Confidence 46666777777555 432 22222222222222233334444321 23356788999999999999999999999
Q ss_pred eCCEECCCC-CeEEEecCCEEEEEEccCCC-CCCeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 93 KGNRELSKR-DYSMSYSDGVVSMEIIDCKP-EDSGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 93 ~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
+++..+... .+.+........|.|.++.. .|+|.|+|.|.|..|.....+.|.|.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 139 HGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp ETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred ECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 999988653 34444444445799999984 899999999999999999999888864
No 89
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.57 E-value=2.3e-14 Score=105.65 Aligned_cols=126 Identities=10% Similarity=0.086 Sum_probs=86.9
Q ss_pred CceeEEEEeCCCC-CCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC
Q psy12421 16 DNPRLRTRAIPKT-IPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG 94 (168)
Q Consensus 16 ~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~ 94 (168)
.+.+.++...|.| . |.+. +.+............+..+|.+ ....+..|+.+.|.|.+.|.|.|.+.|+++
T Consensus 213 ~L~i~~v~~~D~G~~--Y~C~---a~n~~g~~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~ 283 (347)
T 2ifg_A 213 GLTLANVTSDLNRKN--VTCW---AENDVGRAEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFN 283 (347)
T ss_dssp EEEEESCCSTTTTCC--EEEC---CEETTEECCEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEET
T ss_pred eEEEeeCChHHCCCe--EEEE---EEcCCCCEEEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeC
Confidence 4556677777755 4 4222 2222222222233344556665 112245789999999999999999999999
Q ss_pred CEECCCCCeEEEe--c------CCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCC
Q psy12421 95 NRELSKRDYSMSY--S------DGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 95 ~~~~~~~~~~~~~--~------~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
+..+......... . .....|.|.+++..|+|.|+|.|.|..|....++.|.|.++|
T Consensus 284 g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 284 GSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp TEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred CEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 9988764432211 1 113469999999999999999999999999999998887654
No 90
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.57 E-value=2.8e-14 Score=86.15 Aligned_cols=84 Identities=21% Similarity=0.355 Sum_probs=67.5
Q ss_pred ecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
.+.+..+.+|+++.|.|.+.+ .|.+.|++++..+........ .++ .|.|.++..+|+|.|.|.|.|..|.....+
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~-~~~--~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 81 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVL-IGE--YLQIKGATPRDSGLYACTAARTVDSETWIF 81 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEE-ETT--EEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEE-eCC--EEEECcCCcccCEEEEEEEccCCCcEEEEE
Confidence 445577889999999999887 589999999998865432222 344 799999999999999999999999988899
Q ss_pred EEEEeeCCC
Q psy12421 143 VVIVESEEE 151 (168)
Q Consensus 143 ~l~v~~~p~ 151 (168)
.|.|.+++.
T Consensus 82 ~l~V~~~~~ 90 (95)
T 4hwu_A 82 MVNVTDAAE 90 (95)
T ss_dssp EEEECCC--
T ss_pred EEEEeCCcc
Confidence 998887653
No 91
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.56 E-value=2e-14 Score=96.55 Aligned_cols=126 Identities=21% Similarity=0.357 Sum_probs=86.1
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCcc--eeeEeeecccCCCeEEeecC--CeEEecCCcEEEEEEEeccCCCeeE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREPL--QITFWQETVESAPNFTFLLR--PRVMQVRQTCKLLCCLSGKPPPTVK 90 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~g~p~p~i~ 90 (168)
..+.+.++...|.|. |.|. +.+.... ........+..+|.+..... ...+..|+.+.|.|.+.|.|.|.+.
T Consensus 57 ~~L~i~~~~~~d~G~--Y~C~---~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~ 131 (189)
T 2v5t_A 57 NNLQILNINKSDEGI--YRCE---GRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAIS 131 (189)
T ss_dssp SCEEETTCCGGGCEE--EEEE---EEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEE
T ss_pred CCEEEeeCCHhHCcE--EEEE---EEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEE
Confidence 346666777777554 4322 2222111 11112223344565554333 3456679999999999999999999
Q ss_pred EEeCCEECCCCC-eEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 91 WYKGNRELSKRD-YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 91 W~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
|++++..+.... +......+ .|.|.++...|+|.|+|.|.|..|....++.|.|.
T Consensus 132 W~~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 132 WFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEECCEECcCCCcEEEecCCC--EEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 999999887543 33322333 79999999999999999999999999888888775
No 92
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.56 E-value=3.7e-14 Score=95.61 Aligned_cols=124 Identities=15% Similarity=0.182 Sum_probs=87.8
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccC-cceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRRE-PLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG 94 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~ 94 (168)
.+.+.++...|.|. |. +.+.+.. ..........+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++
T Consensus 63 ~L~i~~~~~~d~G~--Y~---C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~ 137 (191)
T 1epf_A 63 TLTIYNANIDDAGI--YK---CVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHK 137 (191)
T ss_dssp EEEECSCCGGGCEE--EE---EEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEET
T ss_pred EEEEccCCcccCEE--EE---EEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEEC
Confidence 45566677777555 42 2333332 122222233445678888888888899999999999999999999999999
Q ss_pred CEECCC--CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEE
Q psy12421 95 NRELSK--RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146 (168)
Q Consensus 95 ~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 146 (168)
+..+.. ........++ .|.|.++...|+|.|+|.|.|..|.......+.|
T Consensus 138 ~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 138 GRDVILKKDVRFIVLSNN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp TEEGGGGCCTTEEECTTS--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CEEeeccCCceEEEecCC--eEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 998753 1122233344 6999999999999999999999876665555554
No 93
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.56 E-value=6.7e-14 Score=100.04 Aligned_cols=134 Identities=15% Similarity=0.181 Sum_probs=91.8
Q ss_pred CCceeEEEEeCCCCCCCCCCccc---ceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEec-cCCCeeE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQ---QVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPPTVK 90 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p~i~ 90 (168)
..+.+.++...|.+. |.|... .........+.+. .....+|.+...+....+.+|+.+.|.|.+.+ .|.|.+.
T Consensus 144 ~~L~i~~v~~~d~G~--Y~C~a~~~~~~~~~~~~~l~V~-~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~ 220 (289)
T 3ejj_X 144 RGFIIRKAKVLDSNT--YVCKTMVNGRESTSTGIWLKVN-RVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVI 220 (289)
T ss_dssp TEEEESSCCGGGCEE--EEEEEEETTEEEECCCEEEEEE-SSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEE
T ss_pred CCEEEeecccccCEE--EEEEEEeCCCccccccEEEEEE-ECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEE
Confidence 446677777777655 433322 1111122222222 12236788888888888889999999999998 7999999
Q ss_pred EEeCCEECCCCCeEEEecC---CEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 91 WYKGNRELSKRDYSMSYSD---GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 91 W~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
|++++..+........... ....|.|.++...|+|.|+|.|.|..|....++.|.+...+.
T Consensus 221 W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 221 LKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHH 284 (289)
T ss_dssp EEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC----
T ss_pred EEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEeccc
Confidence 9999998865322111111 133799999999999999999999999999999998876554
No 94
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.56 E-value=4.1e-14 Score=102.16 Aligned_cols=96 Identities=21% Similarity=0.413 Sum_probs=75.6
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEe-cC-CEEEEEEccCCC-CCCeEEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSY-SD-GVVSMEIIDCKP-EDSGEYKCVA 131 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~-~~-~~~~l~i~~~~~-~d~G~Y~C~a 131 (168)
..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+...++.... .. ....|.|.++.. .|+|.|+|.+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 83 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVA 83 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEE
Confidence 56899999999999999999999999999999999999999888765554432 22 236899999998 9999999999
Q ss_pred EeCCcceEEEEEEEEeeCC
Q psy12421 132 TNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v~~~p 150 (168)
.|..|.....+.|.|...+
T Consensus 84 ~n~~g~~~~~~~l~V~~~~ 102 (304)
T 2yd9_A 84 QNSVGEITVHAKLTVLRED 102 (304)
T ss_dssp ECSSCEECCEEEEEEECGG
T ss_pred ECCCCeEEEEEEEEEeccc
Confidence 9999998888888887653
No 95
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=1e-14 Score=91.31 Aligned_cols=92 Identities=14% Similarity=0.171 Sum_probs=74.3
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-CeEEE-ecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-DYSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
++.|...+.+..+.+|+++.|.|.+.|.|.|.+.|++++..+... ++.+. ..++...|.|.++..+|+|.|+|.
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~---- 88 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE---- 88 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEE----
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEE----
Confidence 457777888899999999999999999999999999999877653 23322 224445799999999999999998
Q ss_pred CcceEEEEEEEEeeCCCc
Q psy12421 135 HGTDETNCVVIVESEEES 152 (168)
Q Consensus 135 ~g~~~~~~~l~v~~~p~~ 152 (168)
.|.....+.|.|..+|..
T Consensus 89 ~g~~~~~~~L~V~~~p~~ 106 (115)
T 2cr6_A 89 AGDQRASAALRVTEKPSV 106 (115)
T ss_dssp ETTEECCEEEEEECCSSC
T ss_pred ECCeeEEEEEEEECCCce
Confidence 467777888999877653
No 96
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.56 E-value=5.4e-15 Score=102.31 Aligned_cols=92 Identities=15% Similarity=0.324 Sum_probs=69.3
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCeeEEEe----CCEECCCCCe--E-EEe-----cCCEEEEEEccCCCCCCeEEEEEE
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYK----GNRELSKRDY--S-MSY-----SDGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~----~~~~~~~~~~--~-~~~-----~~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
+....+..|+.+.|.|.+.+.|.|.+.|++ ++..+..... . ... ......|.|.++...|+|.|+|.|
T Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 204 (231)
T 3ojm_B 125 PANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKV 204 (231)
T ss_dssp SCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEE
T ss_pred CCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEE
Confidence 456788899999999999999999999999 6665533211 1 110 011126999999999999999999
Q ss_pred EeCCcceEEEEEEEEeeCCCchhh
Q psy12421 132 TNKHGTDETNCVVIVESEEESKEQ 155 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v~~~p~~~~~ 155 (168)
.|..|....++.|.|...|..+..
T Consensus 205 ~n~~g~~~~~~~l~V~~~p~~p~~ 228 (231)
T 3ojm_B 205 SNYIGQANQSAWLTVLPKQQAPGR 228 (231)
T ss_dssp EETTEEEEEEEEEEEECCC-----
T ss_pred EeccceEeeEEEEEEecCCCCCcc
Confidence 999999999999999988877654
No 97
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.56 E-value=8e-14 Score=100.44 Aligned_cols=96 Identities=27% Similarity=0.519 Sum_probs=81.9
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC--CeEEE-ecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR--DYSMS-YSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
.+|.|...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+... ++.+. ..++...|.|.+++..|+|.|+|.|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 5789998999999999999999999999999999999999988643 33332 24556689999999999999999999
Q ss_pred eCCcceEEEEEEEEeeCCC
Q psy12421 133 NKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~p~ 151 (168)
|..|.......|.|..+|.
T Consensus 83 n~~g~~~~~~~l~V~~~p~ 101 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAK 101 (305)
T ss_dssp ETTEEEEEEEEEEECEEEE
T ss_pred cCCCCccceEEEEEecCCc
Confidence 9999988888888876554
No 98
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.56 E-value=8.7e-14 Score=94.19 Aligned_cols=95 Identities=22% Similarity=0.273 Sum_probs=76.9
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEe-ccCCCeeEEEeCCEECCCCC---eEEEecCC-------EEEEEEccCCCCCCe
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLS-GKPPPTVKWYKGNRELSKRD---YSMSYSDG-------VVSMEIIDCKPEDSG 125 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~---~~~~~~~~-------~~~l~i~~~~~~d~G 125 (168)
+|.|...+.+..+.+|+.+.|.|.+. |.|.+.+.|++++..+.... +.+..... ...|.|.++...|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 67888889999999999999999999 99999999999999887642 22222221 357999999999999
Q ss_pred EEEEEEEeCCcceEE-EEEEEEeeCCC
Q psy12421 126 EYKCVATNKHGTDET-NCVVIVESEEE 151 (168)
Q Consensus 126 ~Y~C~a~n~~g~~~~-~~~l~v~~~p~ 151 (168)
.|.|.+.|..|.... .+.|.|..+|.
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~ 108 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGLPY 108 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCSCE
T ss_pred EEEEEEEeCCCceecccEEEEEecCCe
Confidence 999999998876544 37788877654
No 99
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.55 E-value=1.1e-13 Score=87.28 Aligned_cols=88 Identities=17% Similarity=0.156 Sum_probs=66.4
Q ss_pred CeEEecCCcEEEEEEEec--cCCCeeEEEeCCEECC------CCCeEEEec---CCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 66 PRVMQVRQTCKLLCCLSG--KPPPTVKWYKGNRELS------KRDYSMSYS---DGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g--~p~p~i~W~~~~~~~~------~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
...+.+|+++.|.|.+.| .|.+.+.|++++..+. ......... .....|.|.+++..|+|.|+|.|.|.
T Consensus 17 ~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 96 (122)
T 3s35_X 17 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 96 (122)
T ss_dssp CEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECS
T ss_pred CEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccC
Confidence 357889999999999998 4557899999876432 111111111 12337999999999999999999999
Q ss_pred CcceEEEEEEEEeeCCCch
Q psy12421 135 HGTDETNCVVIVESEEESK 153 (168)
Q Consensus 135 ~g~~~~~~~l~v~~~p~~~ 153 (168)
.|.....+.|.|.++|...
T Consensus 97 ~g~~~~~~~l~V~~~p~i~ 115 (122)
T 3s35_X 97 LMTKKNSTFVRVHEKPFVA 115 (122)
T ss_dssp SCEEEEEEEEEEEEEECC-
T ss_pred CCceEEEEEEEEeccCeEE
Confidence 9999999999998876543
No 100
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.55 E-value=4.1e-14 Score=89.65 Aligned_cols=90 Identities=19% Similarity=0.307 Sum_probs=68.3
Q ss_pred ecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEEC---------CCCCeEEE-ecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNREL---------SKRDYSMS-YSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~---------~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
.+....+.+|+++.|.|.+.+.|.+.+.|++.+..+ ...++.+. ...+..+|.|.+++.+|+|.|.|.+.
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 86 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHY 86 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEE
Confidence 344577889999999999999999999999765421 22333332 23344589999999999999999999
Q ss_pred eCCcceEEEEEEEEeeCCCch
Q psy12421 133 NKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~p~~~ 153 (168)
|. |.....+.|.|..+|...
T Consensus 87 n~-g~~~~~~~l~V~~~P~~~ 106 (124)
T 3rbg_A 87 SD-SVSTKEVKVIVLATMKGE 106 (124)
T ss_dssp SS-SEEEEEEEEEEECC----
T ss_pred cC-CCCcEEEEEEEEeCCCCC
Confidence 99 988999999998877543
No 101
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.55 E-value=4.1e-14 Score=91.12 Aligned_cols=86 Identities=19% Similarity=0.326 Sum_probs=66.7
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-----------CeEEE---ecCCEEEEEEcc
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-----------DYSMS---YSDGVVSMEIID 118 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-----------~~~~~---~~~~~~~l~i~~ 118 (168)
....+|.|...+.+..+.+|+++.|.|.+.|.|.|.+.|++++..+... ...+. .......|.|.+
T Consensus 17 ~~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~ 96 (137)
T 3qr2_A 17 RGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDT 96 (137)
T ss_dssp ----CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECS
T ss_pred CCCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECC
Confidence 4457899999999999999999999999999999999999977654321 11111 011234799999
Q ss_pred CCCCCCeEEEEEEEeCCcce
Q psy12421 119 CKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~ 138 (168)
+...|+|.|.|.|.|..|..
T Consensus 97 v~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 97 LVEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CCGGGCEEEEEEEECCTTSS
T ss_pred CCcccCEEEEEEEEecCCcc
Confidence 99999999999999999875
No 102
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.55 E-value=2.1e-14 Score=102.75 Aligned_cols=96 Identities=24% Similarity=0.438 Sum_probs=74.4
Q ss_pred cccCCCeEEeecC--CeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC---eEEEecCCEEEEEEccCCCCCCeEE
Q psy12421 53 TVESAPNFTFLLR--PRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD---YSMSYSDGVVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 53 ~~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~G~Y 127 (168)
.+..+|.+..... ...+..|+.+.|.|.+.|.|.|.+.|++++..+.... ...........|.|.++...|+|.|
T Consensus 190 ~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 269 (291)
T 1qz1_A 190 IVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEY 269 (291)
T ss_dssp EEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEE
T ss_pred EEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEE
Confidence 3345666654332 3466789999999999999999999999999886542 1222223333799999999999999
Q ss_pred EEEEEeCCcceEEEEEEEEee
Q psy12421 128 KCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 128 ~C~a~n~~g~~~~~~~l~v~~ 148 (168)
+|.|.|..|.....+.|.|.+
T Consensus 270 ~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 270 VCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEeCCCceEEEEEEEEEc
Confidence 999999999999999988864
No 103
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.55 E-value=1.1e-13 Score=93.07 Aligned_cols=126 Identities=19% Similarity=0.271 Sum_probs=85.7
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC-
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG- 94 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~- 94 (168)
.+.+.++...|.+. |.| .+.+............+..+|.+.. .....+..|+.+.|.|.+.|.|.|.+.|+++
T Consensus 59 ~L~i~~~~~~d~G~--Y~C---~~~~~~~~~~~~~~l~V~~~p~~~~-~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~ 132 (192)
T 2va4_A 59 ELTVRNIINSDGGP--YVC---RATNKAGEDEKQAFLQVFVQPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAV 132 (192)
T ss_dssp EEEECSCCGGGCEE--EEE---EEEETTEEEEEEEEEEEEEEEEEEE-ECCEEECTTSEEEEEEEEEEESCCEEEEEETT
T ss_pred EEEEecCChhcCcE--EEE---EEEccccccceEEEEEEEccCcccc-cCcceEEeCCeEEEEEEecCCCCCcEEEEeCC
Confidence 35566666666554 322 2222222222222223345566553 3446677899999999999999999999998
Q ss_pred -CEECCC------CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 95 -NRELSK------RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 95 -~~~~~~------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
+..+.. .++......+...|.|.++...|+|.|+|.|.|..|....++.|.|.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 133 DGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp TTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 555432 23344444555689999999999999999999999998888888763
No 104
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.55 E-value=1.7e-14 Score=98.08 Aligned_cols=110 Identities=11% Similarity=0.112 Sum_probs=78.6
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
.+|.|...+.. .+.+|+.++|.|.+.+ +.+.+.|+|++..+...............|.|.+++..|+|.|+|.+.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 36778777776 8889999999999988 788999999997665321111111334479999999999999999999998
Q ss_pred cc--eEEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 136 GT--DETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 136 g~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
|. ....+.|.|.+.+..+.....+...+.+|+
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~ 115 (196)
T 3p2t_A 82 GWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGK 115 (196)
T ss_dssp EEBCCCCCEEEEEECSSCCCEEEEESCSEECTTC
T ss_pred cccCCCccEEEEecCCCCCCEEEeCCcceecCCC
Confidence 83 345567777654443333333444666775
No 105
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.55 E-value=6.4e-14 Score=94.87 Aligned_cols=120 Identities=16% Similarity=0.175 Sum_probs=86.7
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcc-eeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCC-eeEEEe
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPL-QITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP-TVKWYK 93 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~~ 93 (168)
.+.+.++...|.+. |.| .+.+.... ........+..+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++
T Consensus 69 ~L~i~~~~~~d~G~--Y~C---~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~ 143 (195)
T 2c5d_C 69 QLRITSLQLSDTGQ--YQC---LVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQ 143 (195)
T ss_dssp EEEESSCCSTTCEE--EEE---EEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEE
T ss_pred EEEEEeccccCCcE--EEE---EEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEE
Confidence 46666777777555 422 22222211 111122345678888888888899999999999999999999 999999
Q ss_pred CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceE-EEEEEEE
Q psy12421 94 GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE-TNCVVIV 146 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v 146 (168)
++..+...... .....|.|.++. |+|.|+|.|.|..|... ..+.|.|
T Consensus 144 ~~~~~~~~~~~----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 144 DAVPLATAPGH----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp SSCBSSSSTTS----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCEeccCCCCc----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 99887653321 223378998887 88999999999999886 6888887
No 106
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.55 E-value=1.9e-14 Score=103.16 Aligned_cols=130 Identities=13% Similarity=0.217 Sum_probs=88.6
Q ss_pred CCceeEEEEeCCCC-CCCCCCcccceeccC------cceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCC
Q psy12421 15 QDNPRLRTRAIPKT-IPAYVPEVQQVRRRE------PLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP 87 (168)
Q Consensus 15 ~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 87 (168)
..+.+.++...|.+ . |.| .+.+.. ...+.+. .....+|.+...+....+.+|+.+.|.|.+.|.|.|
T Consensus 145 ~~L~i~~v~~~d~G~~--Y~C---~a~n~~~~~~s~~~~l~V~-~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p 218 (290)
T 2o26_X 145 AGITIKNVKRAYHRLC--VRC---AAQRDGTWLHSDKFTLKVR-EAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTS 218 (290)
T ss_dssp TEEEEESCCGGGTTCE--EEE---EEEETTEEEECCCEEEEEE-CCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTT
T ss_pred CCEEEecccHHHCCCE--EEE---EEEECCceEEeEEEEEEEE-eCCCCCCccccCCCcceEecCCcEEEEEEEecCCcc
Confidence 45667778888866 5 432 222221 1222221 123478888877777888999999999999999999
Q ss_pred e-eEEEeCCEEC----CC-CCeEEE---ecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCC
Q psy12421 88 T-VKWYKGNREL----SK-RDYSMS---YSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 88 ~-i~W~~~~~~~----~~-~~~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
. +.|++++..+ .. ...... .......|.|.++...|+|.|+|.|.|..|.....+.|.|.++|
T Consensus 219 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 219 VNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp CEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred eeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 6 9999998752 21 111111 11223479999999999999999999999999989988887654
No 107
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.55 E-value=4.8e-14 Score=97.12 Aligned_cols=132 Identities=11% Similarity=0.037 Sum_probs=84.0
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceec---cCcceeeEeeecccCCCeEEeecCC-eEEecCCcEEEEEEEeccC--CCe
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRR---REPLQITFWQETVESAPNFTFLLRP-RVMQVRQTCKLLCCLSGKP--PPT 88 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p--~p~ 88 (168)
..+.+.+++..|.|. |.|....-.. ...+.+.+ ....+|.+...+.. ..+.+|+++.|.|.+.|.| .+.
T Consensus 64 ~~l~I~~v~~~D~G~--Y~C~a~n~~~~~~s~~~~l~v---~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~ 138 (213)
T 2x1w_L 64 KGFTIPSYMISYAGM--VFCEAKINDESYQSIMYIVVV---VGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGID 138 (213)
T ss_dssp TEEEEEGGGTTTCSE--EEEEEC----CEECCCEEEEE---CBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCE
T ss_pred ccEEEccCChhcCce--EEEEEEECCeeEEEEEEEEEE---eCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceE
Confidence 456777888888766 4333221000 01112222 11234555555544 4899999999999999855 457
Q ss_pred eEEEeCCEECCCCCe-E-EEe-------cCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 89 VKWYKGNRELSKRDY-S-MSY-------SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 89 i~W~~~~~~~~~~~~-~-~~~-------~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
+.|++++..+..... . ... ......|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+.|.
T Consensus 139 i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 139 FNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp EEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred EEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 999998875432111 0 000 11133699999999999999999999999999999999987653
No 108
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.55 E-value=5.7e-14 Score=86.71 Aligned_cols=91 Identities=27% Similarity=0.461 Sum_probs=73.1
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+|.|...+.+..+.+|+++.|.|.+.+. |.+.|++++..+.. .++.+...+....|.|.++..+|+|.|+|.|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a-- 81 (108)
T 2dm7_A 6 SGPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMC-- 81 (108)
T ss_dssp CCCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEE--
T ss_pred CCCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEE--
Confidence 457888777888899999999999998765 78999999987764 4455555566667999999999999999998
Q ss_pred CCcceEEEEEEEEeeCCC
Q psy12421 134 KHGTDETNCVVIVESEEE 151 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~ 151 (168)
+.....+.|.|..+|.
T Consensus 82 --~n~~~~~~l~V~~~p~ 97 (108)
T 2dm7_A 82 --GQERTSATLTVRALPA 97 (108)
T ss_dssp --TTEEEEEECEEECCCS
T ss_pred --cCCEEEEEEEEecCCH
Confidence 4456777888877553
No 109
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.54 E-value=1.3e-14 Score=103.91 Aligned_cols=131 Identities=18% Similarity=0.319 Sum_probs=85.6
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCc--ceeeEeeecccCCCeEEeecC--CeEEecCCcEEEEEEEeccCCCeeEE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREP--LQITFWQETVESAPNFTFLLR--PRVMQVRQTCKLLCCLSGKPPPTVKW 91 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~g~p~p~i~W 91 (168)
.+.+.++...|.+. |.| .+.+... .........+..+|.+..... ...+.+|+.+.|.|.+.|.|.|.+.|
T Consensus 154 ~L~i~~v~~~d~G~--Y~C---~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W 228 (291)
T 2wim_A 154 NLQILNINKSDEGI--YRC---EGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISW 228 (291)
T ss_dssp CEEETTCCGGGCEE--EEE---EEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEE
T ss_pred CEEEEecchhhCEE--EEE---EEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEE
Confidence 45566666666554 422 2222221 111222223345666544333 23566899999999999999999999
Q ss_pred EeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCc
Q psy12421 92 YKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 152 (168)
++++..+......... .....|.|.++...|+|.|+|.|.|..|....++.|.|..++..
T Consensus 229 ~~~g~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 288 (291)
T 2wim_A 229 FRNGKLIEENEKYILK-GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHHH 288 (291)
T ss_dssp EETTEECCCTTTEEEC-STTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC------
T ss_pred EECCEECcCCccEEEc-CCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEeccc
Confidence 9999988754322222 22237999999999999999999999999999999998876543
No 110
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.54 E-value=2.6e-14 Score=103.41 Aligned_cols=93 Identities=24% Similarity=0.385 Sum_probs=75.7
Q ss_pred CCeEEee-cCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-CeEEEec-CCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 57 APNFTFL-LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-DYSMSYS-DGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 57 ~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++++..+... ++.+... +....|.|.++...|+|.|+|.|.|
T Consensus 221 ~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 300 (317)
T 2y25_A 221 RARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKN 300 (317)
T ss_dssp SCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEE
T ss_pred CCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 4555544 34468899999999999999999999999999887653 3343333 4456899999999999999999999
Q ss_pred CCcceEEEEEEEEeeC
Q psy12421 134 KHGTDETNCVVIVESE 149 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~ 149 (168)
..|.....+.|.|..+
T Consensus 301 ~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 301 KYGSETSDFTVSVFIP 316 (317)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEcC
Confidence 9999999999988743
No 111
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.54 E-value=1.2e-14 Score=99.31 Aligned_cols=96 Identities=24% Similarity=0.415 Sum_probs=72.9
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEE-eccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCL-SGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
++.+...+....+..|+.+.|.|.+ .+.|.|.+.|++++..+..........++ .|.|.++..+|+|.|+|.|.|..
T Consensus 111 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~N~~ 188 (212)
T 2v9r_A 111 RDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGG--KLMITYTRKSDAGKYVCVGTNMV 188 (212)
T ss_dssp CSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETT--EEEESSCCGGGCEEEEEEEEETT
T ss_pred cccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCC--eEEEeeCCHhhCeeEEEEEeccc
Confidence 3444445566788999999999998 89999999999999988653323333455 79999999999999999999999
Q ss_pred cceEE-EEEEEEeeCCCchh
Q psy12421 136 GTDET-NCVVIVESEEESKE 154 (168)
Q Consensus 136 g~~~~-~~~l~v~~~p~~~~ 154 (168)
|.... .+.|.|.++|....
T Consensus 189 g~~~s~~~~l~V~~~P~~~~ 208 (212)
T 2v9r_A 189 GERESEVAELTVLERPSFVK 208 (212)
T ss_dssp EEEECCCEEEEEEC------
T ss_pred CceecceEEEEEEeCchHhh
Confidence 98765 47899988765443
No 112
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.54 E-value=2.9e-13 Score=90.81 Aligned_cols=96 Identities=23% Similarity=0.445 Sum_probs=77.9
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEeccC-CCeeEEEe---CC-EECCC---CCeEEEecCCEEEEEEccCC-CCC
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKP-PPTVKWYK---GN-RELSK---RDYSMSYSDGVVSMEIIDCK-PED 123 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~~---~~-~~~~~---~~~~~~~~~~~~~l~i~~~~-~~d 123 (168)
.+..+|.+...+....+.+|+.+.|.|.+.|.| .|.+.|++ ++ ..+.. .++.+...++...|.|.++. ..|
T Consensus 79 ~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d 158 (184)
T 3b5h_A 79 QLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEAD 158 (184)
T ss_dssp EECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTS
T ss_pred EEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecccccc
Confidence 445778888777777899999999999999999 89999999 44 44432 34555555666689999999 899
Q ss_pred CeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 124 SGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 124 ~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
+|.|.|.|.|..|.....+.|.|.+
T Consensus 159 ~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 159 PGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp SEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CceEEEEEEeCCCcceEEEEEEEec
Confidence 9999999999999999888888764
No 113
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=8.7e-15 Score=88.62 Aligned_cols=84 Identities=19% Similarity=0.366 Sum_probs=67.5
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
.+|.|...+.+..+.+|+.+.|.|.+.+.|.|.+.|++++..+.... .. .|.|.++...|+|.|.|.+.|..
T Consensus 9 ~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~------~~--~L~i~~v~~~d~G~Y~C~a~n~~ 80 (96)
T 2ens_A 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP------SP--VLILPEIGPQDQGTYSCVATHSS 80 (96)
T ss_dssp CSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCC------CS--EEEEESCCTTTCEEEECEECCSS
T ss_pred CCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCC------CC--EEEECCCCcccCEEEEEEEEeCC
Confidence 35677778888889999999999999999999999999987765431 22 79999999999999999999976
Q ss_pred cceEE--EEEEEEe
Q psy12421 136 GTDET--NCVVIVE 147 (168)
Q Consensus 136 g~~~~--~~~l~v~ 147 (168)
|.... .+.|.|.
T Consensus 81 ~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 81 HGPQESRAVSISII 94 (96)
T ss_dssp CCCEECCCEEEEEC
T ss_pred CCcEEEEEEEEEEe
Confidence 65444 4444443
No 114
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.53 E-value=3.7e-14 Score=102.36 Aligned_cols=93 Identities=29% Similarity=0.506 Sum_probs=71.0
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+...... ..+...|.+.++ .|+|.|+|.|.|.
T Consensus 203 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~---~~~~~~L~i~~~--~d~G~Y~C~a~N~ 277 (304)
T 2yd9_A 203 NVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDM---PVGRNVLELTDV--KDSANYTCVAMSS 277 (304)
T ss_dssp CEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSC---CBSEEEEEECSC--CSCEEEEEEEEET
T ss_pred ccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccc---cCCcEEEEEccc--ccCEEEEEEEEeC
Confidence 35788887777778899999999999999999999999999988654321 234345777665 5999999999999
Q ss_pred CcceEEEEEEEEeeCCCc
Q psy12421 135 HGTDETNCVVIVESEEES 152 (168)
Q Consensus 135 ~g~~~~~~~l~v~~~p~~ 152 (168)
.|....++.|.|.+.+..
T Consensus 278 ~G~~~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 278 LGVIEAVAQITVKSLPKA 295 (304)
T ss_dssp TEEEEEEEEEC-------
T ss_pred CCcEEEEEEEEEecCccc
Confidence 999999999998876543
No 115
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.53 E-value=2e-13 Score=101.52 Aligned_cols=95 Identities=22% Similarity=0.419 Sum_probs=78.1
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC--CEECCC------CCeEEEecCCEEEEEEccCCCCCCeEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG--NRELSK------RDYSMSYSDGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~--~~~~~~------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 128 (168)
+|.|.. +.+..+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. .++.+....+...|.|.++...|+|.|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 466664 6677888999999999999999999999999 877643 3344443345568999999999999999
Q ss_pred EEEEeCCcceEEEEEEEEeeCCCc
Q psy12421 129 CVATNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 129 C~a~n~~g~~~~~~~l~v~~~p~~ 152 (168)
|.|.|..|.....+.|.|..+|..
T Consensus 80 C~a~n~~g~~~~~~~l~V~~~P~~ 103 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEYAPKF 103 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEEEEEE
T ss_pred EEEEeCCCCcceEEEEEEEeCCEE
Confidence 999999999988999999876643
No 116
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.53 E-value=1e-13 Score=92.79 Aligned_cols=118 Identities=19% Similarity=0.228 Sum_probs=83.8
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCc-ceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCC-eeEEEe
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREP-LQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP-TVKWYK 93 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~~ 93 (168)
.+.+.++...|.+. |.|. +.+... .........+..+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++
T Consensus 61 ~L~i~~~~~~d~G~--Y~C~---~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~ 135 (182)
T 1rhf_A 61 FLSLKSVERSDAGR--YWCQ---VEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWR 135 (182)
T ss_dssp EEEESSCCGGGCEE--EEEE---ESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEE
T ss_pred EEEEeecCcccCeE--EEEE---EEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEc
Confidence 34566667777554 4322 222211 1112222344568998888888899999999999999999999 999999
Q ss_pred CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEE-EEEEEE
Q psy12421 94 GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET-NCVVIV 146 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v 146 (168)
++..+..... ....|.|.++ .|+|.|+|.|.|..|.... .+.|.|
T Consensus 136 ~~~~~~~~~~------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 136 GTTKIGGPAP------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp TTEECSCSEE------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeECCCCCC------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 9988865321 2237888887 5899999999999998753 666665
No 117
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.53 E-value=5.9e-15 Score=100.88 Aligned_cols=127 Identities=17% Similarity=0.189 Sum_probs=85.6
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEE-eccCCCeeEEEe
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCL-SGKPPPTVKWYK 93 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~ 93 (168)
..|.+.+++..|.|. |.|. +.+............+..+|.+........+..|+.+.|.|.+ .|.|.|.+.|++
T Consensus 84 ~~L~i~~v~~~D~G~--Y~C~---~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~ 158 (214)
T 3jz7_A 84 ASINVTNLQLSDIGT--YQCK---VKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQK 158 (214)
T ss_dssp CCEEECSCCGGGCEE--EEEE---EEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEE
T ss_pred ccEEEccCChhhCeE--EEEE---EEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEE
Confidence 447788888888666 4332 2232222222223344445554433333447789999999999 899999999999
Q ss_pred CC--EECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeC
Q psy12421 94 GN--RELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 149 (168)
Q Consensus 94 ~~--~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 149 (168)
++ ..+.... .....++ .|.|.++...|+|.|+|.|.|..|.....+.|.|..+
T Consensus 159 ~~~~~~~~~~~-~~~~~~~--~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 159 LSDSQTMPTPW-LAEMTSP--VISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CSTTCCCCGGG-GGGTTSS--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred CCCCCccCccc-eeccCCC--EEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 54 3332211 1111233 7999999999999999999999999999998888754
No 118
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.52 E-value=1.8e-13 Score=97.97 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=75.9
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC--eEEEec----CCEEEEEEccCCCCCCeEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD--YSMSYS----DGVVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~--~~~~~~----~~~~~l~i~~~~~~d~G~Y~C 129 (168)
.+|.+...+....+.+|+++.|.|.+.|.|.|.+.|++++....... ...... .....|.|.++..+|+|.|+|
T Consensus 180 ~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 259 (289)
T 3mjg_X 180 SSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTC 259 (289)
T ss_dssp CCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEE
T ss_pred CCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEE
Confidence 46777777777889999999999999999999999998765432211 111111 123479999999999999999
Q ss_pred EEEeCCcceEEEEEEEEeeCCCchh
Q psy12421 130 VATNKHGTDETNCVVIVESEEESKE 154 (168)
Q Consensus 130 ~a~n~~g~~~~~~~l~v~~~p~~~~ 154 (168)
.|.|..|....+..|.|...+....
T Consensus 260 ~a~N~~G~~~~~~~l~v~~~~~~~~ 284 (289)
T 3mjg_X 260 NVTESVNDHQDEKAINITVVESGHH 284 (289)
T ss_dssp EEEETTTTEEEEEEEEEEEEC----
T ss_pred EeecCCCCceeEEEEEEEEEecCcc
Confidence 9999999999999999987765443
No 119
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.51 E-value=7.8e-14 Score=95.20 Aligned_cols=128 Identities=13% Similarity=0.183 Sum_probs=84.0
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccC-cceeeEeeecc---cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRRE-PLQITFWQETV---ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVK 90 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 90 (168)
..+.+.++...|.|. |.|. +.+.. ..........+ ...|.+...... +..|+.+.|.|.+.+.| |.+.
T Consensus 71 ~~L~i~~v~~~D~G~--Y~C~---~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~ 142 (208)
T 3r4d_A 71 GSLLFQMITMKDMGV--YTLD---MTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQ 142 (208)
T ss_dssp SCEEECSCCGGGCEE--EEEE---EECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEE
T ss_pred CeEEEccccccCCeE--EEEE---EEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceE
Confidence 457788888888766 4332 22221 11111111122 233566544444 88899999999998866 8999
Q ss_pred EEeCCEECCCCC-eEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEE-EEEEEEeeCCCc
Q psy12421 91 WYKGNRELSKRD-YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET-NCVVIVESEEES 152 (168)
Q Consensus 91 W~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p~~ 152 (168)
|++++..+.... +.+...++ .|.|.++...|+|.|+|.|.|..|.... .+.|.|..++..
T Consensus 143 W~~~g~~l~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~ 204 (208)
T 3r4d_A 143 WLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204 (208)
T ss_dssp EEETTEECCCCSSEEEETTTT--EEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC-----
T ss_pred EEECCEeCCCCCCeEEcCCCC--EEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCcc
Confidence 999999887543 33333334 7999999999999999999999998654 667777766543
No 120
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.51 E-value=3.3e-14 Score=97.08 Aligned_cols=129 Identities=19% Similarity=0.211 Sum_probs=85.4
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccC--cceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEE-EeccCCCeeEE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRRE--PLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCC-LSGKPPPTVKW 91 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~-~~g~p~p~i~W 91 (168)
..+.+.++...|.|. |.|. +.+.. ..........+..+|.+...+....+.+|+.+.|.|. +.+.|.|.+.|
T Consensus 65 ~~L~i~~v~~~D~G~--Y~C~---~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W 139 (212)
T 1f97_A 65 SGITFSSVTRKDNGE--YTCM---VSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSW 139 (212)
T ss_dssp TEEEESCCCGGGCEE--EEEE---EEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEE
T ss_pred eeEEEcccCcccCeE--EEEE---EEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEE
Confidence 445667788888665 4332 22221 1222222234445666655555677889999999999 78999999999
Q ss_pred EeCCE-ECCCCCe--------EEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcce--EEEEEEEEee
Q psy12421 92 YKGNR-ELSKRDY--------SMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD--ETNCVVIVES 148 (168)
Q Consensus 92 ~~~~~-~~~~~~~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~~ 148 (168)
++++. .+..... ..........|.|.++...|.|.|+|.|.|..|.. ...+.|.|.+
T Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 140 FKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp EETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred EeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 99998 7654211 11112222279999999999999999999999988 4455666654
No 121
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.50 E-value=4.4e-14 Score=95.19 Aligned_cols=95 Identities=22% Similarity=0.397 Sum_probs=76.0
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC--CCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK--RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
..+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .++.+...+. .|.|.+++..|+|.|.|.+.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEEEEE
Confidence 4567777777778899999999999999999999999999998764 3344333333 79999999999999999999
Q ss_pred eCCcc-eEEEEEEEEeeCCC
Q psy12421 133 NKHGT-DETNCVVIVESEEE 151 (168)
Q Consensus 133 n~~g~-~~~~~~l~v~~~p~ 151 (168)
|..|. ......|.|..+|.
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~ 102 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPK 102 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEE
T ss_pred cCCCceeEeEEEEEEEeCCc
Confidence 99887 45566677765543
No 122
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.49 E-value=8.3e-14 Score=94.69 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=70.9
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
.+|.|...+. ..+.+|+++.|.|.+.+.|. .+.|+|++..+...............|.|.+++..|+|.|+|.+.|..
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 2d3v_A 4 SKATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPA 81 (196)
T ss_dssp CBCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCC
Confidence 4678877776 47889999999999988765 999999987664311111112334579999999999999999999988
Q ss_pred cce--EEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 136 GTD--ETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 136 g~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
|.. ...+.|.|...+..+.....+...+.+|+
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~ 115 (196)
T 2d3v_A 82 GWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGE 115 (196)
T ss_dssp EECBCCCCEEEEEECSSCCCEEEC----------
T ss_pred CcCCcCccEEEEecCCCCCCeEEccCCccccCCC
Confidence 753 34567777764333322222334666665
No 123
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.49 E-value=3.1e-13 Score=90.92 Aligned_cols=94 Identities=22% Similarity=0.478 Sum_probs=74.9
Q ss_pred CCeEEeecC--CeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC-eEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 57 APNFTFLLR--PRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD-YSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 57 ~p~~~~~~~--~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
||.|..... +..+.+|+.+.|.|.+.+.|.+.+.|++++..+.... +.+..... .|.|.++...|+|.|.|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCee--EEEEecCChhcCcEEEEEEEc
Confidence 566665443 4567789999999999999999999999999887643 33332333 799999999999999999999
Q ss_pred CCcceEEEEEEEEeeCCCc
Q psy12421 134 KHGTDETNCVVIVESEEES 152 (168)
Q Consensus 134 ~~g~~~~~~~l~v~~~p~~ 152 (168)
..|.......|.|..+|..
T Consensus 80 ~~~~~~~~~~l~V~~~p~~ 98 (192)
T 2va4_A 80 KAGEDEKQAFLQVFVQPHI 98 (192)
T ss_dssp TTEEEEEEEEEEEEEEEEE
T ss_pred cccccceEEEEEEEccCcc
Confidence 9998888888888766543
No 124
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.49 E-value=3.6e-13 Score=92.22 Aligned_cols=104 Identities=16% Similarity=0.193 Sum_probs=73.9
Q ss_pred EEeecCCeE-EecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcce
Q psy12421 60 FTFLLRPRV-MQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 60 ~~~~~~~~~-~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 138 (168)
+...+.+.. +.+|+++.|.|.+.|.|.|.+.|++....... . ..........|.|.+++..|+|.|.|.|.|..|..
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~-~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~ 80 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN-G-KVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKL 80 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS-S-EEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEE
T ss_pred EEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc-c-eEEEcCCccEEEECcCCHHHCEEEEEEEEECCceE
Confidence 334555544 44999999999999999999999984321111 1 12223344479999999999999999999999888
Q ss_pred EEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 139 ETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 139 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
...+.|.|..+|..+.... ...+.+|+
T Consensus 81 ~~~~~l~V~~~p~~~~~~~--~~~~~~G~ 107 (202)
T 1vca_A 81 EKGIQVEIYSFPKDPEIHL--SGPLEAGK 107 (202)
T ss_dssp EEEEEEEEEBCCSCCEEEE--SSCEETTS
T ss_pred eeEEEEEEEeCCCCCEeCC--ceEEcCCC
Confidence 8888999987765443221 24566665
No 125
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.49 E-value=1.6e-13 Score=91.69 Aligned_cols=122 Identities=19% Similarity=0.141 Sum_probs=80.5
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEe-ccCCCeeEEEe
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLS-GKPPPTVKWYK 93 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~ 93 (168)
..+.+.+++..|.|. |.|............+.+ ..++.+. ......+.+|+.+.|.|.+. +.|.+.+.|++
T Consensus 51 ~~L~i~~v~~~d~G~--Y~C~~~~~~~s~~~~l~V-----~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 122 (176)
T 1f2q_A 51 SSLNIVNAKFEDSGE--YKCQHQQVNESEPVYLEV-----FSDWLLL-QASAEVVMEGQPLFLRCHGWRNWDVYKVIYYK 122 (176)
T ss_dssp SEEEECSCCGGGCEE--EEEECTTSSCCCCEEEEE-----ECSSEEE-EESCSEEETTSCEEEEEEEGGGCCEEEEEEEE
T ss_pred eEEEEeccceecCEE--EEEEcCCccccccEEEEE-----eCcceee-cCCcceeeCCCCEEEEEEecCCCCceEEEEEE
Confidence 345566677777555 433322211122222222 2333333 34456788999999999995 66778999999
Q ss_pred CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcc-eEEEEEEEEeeCCC
Q psy12421 94 GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT-DETNCVVIVESEEE 151 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~p~ 151 (168)
++..+.... .++ .|.|.++..+|+|.|+|.|.|..+. ....+.|.|.++|.
T Consensus 123 ~g~~~~~~~-----~~~--~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 123 DGEALKYWY-----ENH--NISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp TTEECCSCC-----CSS--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred CCEEEeeec-----CCC--eEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 998875321 223 7999999999999999999997544 45567888887764
No 126
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.49 E-value=6.3e-14 Score=101.52 Aligned_cols=94 Identities=16% Similarity=0.280 Sum_probs=74.4
Q ss_pred cCCCeEEeecCC-eEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCe-----EEEecC--------CEEEEEEccCC
Q psy12421 55 ESAPNFTFLLRP-RVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDY-----SMSYSD--------GVVSMEIIDCK 120 (168)
Q Consensus 55 ~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~-----~~~~~~--------~~~~l~i~~~~ 120 (168)
..+|.+...+.. ..+.+|+.+.|.|.+.|.|.|.+.|++++..+..... ...... ....|.|.++.
T Consensus 206 ~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 285 (315)
T 1itb_B 206 PTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIE 285 (315)
T ss_dssp CCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCC
T ss_pred CCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecC
Confidence 467887655544 4688999999999999999999999999998865321 111111 12379999999
Q ss_pred CCC-CeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 121 PED-SGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 121 ~~d-~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
..| +|.|+|.|.|..|....++.|.|..
T Consensus 286 ~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 286 SRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp GGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred HHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 999 9999999999999999999888753
No 127
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.49 E-value=2.7e-13 Score=104.82 Aligned_cols=132 Identities=14% Similarity=0.135 Sum_probs=94.6
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecC---CeEEecCCcEEEEEEEeccCCCe-eEE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLR---PRVMQVRQTCKLLCCLSGKPPPT-VKW 91 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~p~-i~W 91 (168)
.+.+.++...|.|. | .+.+.+............+..+|.+...+. ...+.+|+.+.|.|.+.|.|.|. +.|
T Consensus 274 ~L~I~~~~~~D~G~--Y---~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W 348 (524)
T 2ec8_A 274 TLTISSARVNDSGV--F---MCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQW 348 (524)
T ss_dssp EEEESSCCTTTCEE--E---EEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEE
T ss_pred EEEECCCCHHHCEE--E---EEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEE
Confidence 34556666666554 4 333334333333333345567788776554 57889999999999999999999 999
Q ss_pred EeCCEECCCCC--eEEEecC----CEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCc
Q psy12421 92 YKGNRELSKRD--YSMSYSD----GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 92 ~~~~~~~~~~~--~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 152 (168)
++++..+.... +.....+ ....|.|.++...|+|.|+|.|.|..|....++.|.|..+|..
T Consensus 349 ~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i 415 (524)
T 2ec8_A 349 IYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEI 415 (524)
T ss_dssp ESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEE
T ss_pred EECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeE
Confidence 99998876533 2211111 2457999999999999999999999999998999998776543
No 128
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.48 E-value=2.7e-13 Score=88.09 Aligned_cols=92 Identities=16% Similarity=0.250 Sum_probs=72.0
Q ss_pred EeecCCeEEecCCcEEEEEEEeccCCCeeEEE---------eCCEECCCCCeEEEe-cCCEEEEEEccCCCCCCeEEEEE
Q psy12421 61 TFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWY---------KGNRELSKRDYSMSY-SDGVVSMEIIDCKPEDSGEYKCV 130 (168)
Q Consensus 61 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~---------~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~ 130 (168)
...+....+.+|+++.|.|.+.+.|.+.+.|+ +++..+...++.... .....+|.|.+++.+|+|.|.|.
T Consensus 42 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 121 (145)
T 1z9m_A 42 QPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCS 121 (145)
T ss_dssp CCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGGCEEEEEE
T ss_pred ecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhhCEEEEEE
Confidence 34566788999999999999999999999999 444444444444322 33345899999999999999999
Q ss_pred EEeCCcceEEEEEEEEeeCCCch
Q psy12421 131 ATNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 131 a~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
+.|. |.......|.|..+|..|
T Consensus 122 ~~n~-~~~~~~~~L~V~~~P~~P 143 (145)
T 1z9m_A 122 IFTM-PVRTAKSLVTVLGIPQKP 143 (145)
T ss_dssp ECSS-SCEEEEEEEEEECCCC--
T ss_pred EEcC-CCceEEEEEEEEeCCCCC
Confidence 9999 888889999999887654
No 129
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.48 E-value=8.1e-14 Score=101.91 Aligned_cols=130 Identities=17% Similarity=0.159 Sum_probs=85.4
Q ss_pred CCCceeEEEEeCCCC-CCCCCCcccceeccCcc-eeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccC-CCeeE
Q psy12421 14 PQDNPRLRTRAIPKT-IPAYVPEVQQVRRREPL-QITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKP-PPTVK 90 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~ 90 (168)
...|++.++...|.| . |.| .+.+.... ........+..+|.+........+.+|+.+.|.|.+.|.| .|.+.
T Consensus 88 ~~~L~i~~v~~~D~Gs~--Y~C---~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~ 162 (329)
T 3oq3_B 88 NGDLWIANYTSNDSHRR--YLC---TVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNIT 162 (329)
T ss_dssp TTEEEESSCCGGGGGCC--EEE---EEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEE
T ss_pred cceEEEcCCChHhCCCc--EEE---EEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEE
Confidence 456777888888866 5 432 23332211 1111112233445544333333456799999999999999 99999
Q ss_pred EEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC--CcceEEE----EEEEEeeCC
Q psy12421 91 WYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK--HGTDETN----CVVIVESEE 150 (168)
Q Consensus 91 W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~--~g~~~~~----~~l~v~~~p 150 (168)
|++++..+..........++ .|.|.++...|+|.|+|.|.|. .|..... +.|.|..++
T Consensus 163 W~k~~~~l~~~~~~~~~~~~--~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~ 226 (329)
T 3oq3_B 163 WYKNNQELIIDGTKYSQSGQ--NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQ 226 (329)
T ss_dssp EEETTEECCCSSSSEEEETT--EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCC
T ss_pred EEECCccCCCCCceEecCCC--EEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCC
Confidence 99999988543222222344 7999999999999999999997 6654433 667777665
No 130
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.48 E-value=1.8e-13 Score=94.45 Aligned_cols=85 Identities=19% Similarity=0.335 Sum_probs=71.6
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCc
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 136 (168)
+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+.... .. .|.|.++...|+|.|+|.|.|..|
T Consensus 118 ~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~------~~--~L~i~~v~~~d~G~Y~C~a~n~~g 189 (218)
T 3k0w_A 118 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET------KK--LYMVPYVDLEHQGTYWCHVYNDRD 189 (218)
T ss_dssp SCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC------SS--EEEESSCCGGGCEEEEEEEECSSC
T ss_pred CceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC------CC--EEEEeecChhcCEEEEEEEEcCCC
Confidence 3778778888899999999999999999999999999998886532 12 799999999999999999999988
Q ss_pred c-eEEEEEEEEeeC
Q psy12421 137 T-DETNCVVIVESE 149 (168)
Q Consensus 137 ~-~~~~~~l~v~~~ 149 (168)
. ....+.|.|...
T Consensus 190 ~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 190 SQDSKKVEIIIDEL 203 (218)
T ss_dssp EEECCCEEEEECC-
T ss_pred CceeeeEEEEEeCC
Confidence 7 455677777653
No 131
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.48 E-value=2.3e-13 Score=91.06 Aligned_cols=96 Identities=18% Similarity=0.236 Sum_probs=72.1
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCe-EEEecCC--EEEEEEccCCCCCCeEEEEEEEe
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDY-SMSYSDG--VVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~-~~~~~~~--~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ....... ...|.|.++...|+|.|.|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 46677777788899999999999999999999999999998876432 2222221 34799999999999999999999
Q ss_pred CCcc-eEEEEEEEEeeCCCc
Q psy12421 134 KHGT-DETNCVVIVESEEES 152 (168)
Q Consensus 134 ~~g~-~~~~~~l~v~~~p~~ 152 (168)
..|. ....+.|.|..+|..
T Consensus 82 ~~~~~~~~~~~l~V~~~p~~ 101 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGVPFF 101 (182)
T ss_dssp CTTCEECCCEEEEEECSCEE
T ss_pred CCCcEEEEEEEEEEecCCeE
Confidence 8775 345777888776543
No 132
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.47 E-value=2.6e-13 Score=93.10 Aligned_cols=126 Identities=12% Similarity=0.066 Sum_probs=78.3
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CCCeeEEEe
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYK 93 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~ 93 (168)
..+.+.++...|.|. |.|............+ .+..+|.+...+ ...+.+|+.+.|.|.+.+. |.+.+.|++
T Consensus 54 ~~L~i~~v~~~D~G~--Y~C~a~n~~~s~~~~l-----~V~~~p~~~~~~-~~~v~~G~~v~L~C~~~~~~p~~~v~W~k 125 (204)
T 3sgj_C 54 SSYFIDAATVDDSGE--YRCQTQLSTLSDPVQL-----EVHIGWLLLQAP-RWVFKEEDPIHLRCHSWKNTALHKVTYLQ 125 (204)
T ss_dssp SEEEESSCCGGGCEE--EEEEETTSBCCCCEEE-----EEECSSEEEECS-CSEEETTCCEEEEEEEGGGCCCEEEEEEE
T ss_pred cEEEEecccccCCEE--EEEEeCCCcccccEEE-----EEecCceEecCC-ceeEeCCCcEEEEEEecCCCCCceEEEEE
Confidence 345556666666554 4333221111111222 233455554443 4778899999999999765 568899999
Q ss_pred CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC-cceEEEEEEEEeeCCCchhh
Q psy12421 94 GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH-GTDETNCVVIVESEEESKEQ 155 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~-g~~~~~~~l~v~~~p~~~~~ 155 (168)
++..+.. ....+ .|.|.++..+|+|.|+|.|.|.. +.....+.|.|.+++..+..
T Consensus 126 ~g~~~~~-----~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P~i 181 (204)
T 3sgj_C 126 NGKGRKY-----FHHNS--DFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVSTI 181 (204)
T ss_dssp TTEEEEE-----EEECC--CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-------
T ss_pred CCcEeec-----ccCCc--eEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCCCCcc
Confidence 9987532 11233 69999999999999999999954 44566778888877655443
No 133
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.47 E-value=8.8e-13 Score=88.75 Aligned_cols=96 Identities=20% Similarity=0.384 Sum_probs=74.8
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccC-CCeeEEEe-CCEECCC--CCeEEEe-cCCEEEEEEccCCCCCCeEEEEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKP-PPTVKWYK-GNRELSK--RDYSMSY-SDGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~~-~~~~~~~--~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
++.|...+.+..+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+.. .++.+.. ......|.|.++...|+|.|.|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 56777888889999999999999999977 89999999 8776653 2333322 245568999999999999999999
Q ss_pred EeCC-cceEEEEEEEEeeCCCc
Q psy12421 132 TNKH-GTDETNCVVIVESEEES 152 (168)
Q Consensus 132 ~n~~-g~~~~~~~l~v~~~p~~ 152 (168)
.|.. +.....+.|.|..+|..
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~ 103 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMF 103 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEE
T ss_pred EcCCCcceEEEEEEEeecCceE
Confidence 9998 45566777777665443
No 134
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.47 E-value=4.9e-14 Score=109.54 Aligned_cols=124 Identities=8% Similarity=-0.017 Sum_probs=86.0
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecC--CeEEecCCcEEEEEEEeccCCCeeEEEeC
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLR--PRVMQVRQTCKLLCCLSGKPPPTVKWYKG 94 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~g~p~p~i~W~~~ 94 (168)
|.+.++...|.|. |.|. +.+. ........+..+|.+...+. ...+.+|+.+.|.|.+.|.|.|.+.|+|+
T Consensus 292 L~I~~v~~~DsG~--Y~C~---a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~ 363 (527)
T 3qs9_E 292 AFVSSVARNDTGY--YTCS---SSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFS 363 (527)
T ss_dssp EEESSCCGGGCEE--EEEE---ETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEET
T ss_pred EEEccCCcccCeE--EEEE---EEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEEC
Confidence 6677778888666 4322 2222 22222234445666654432 35577899999999999999999999999
Q ss_pred CEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 95 NRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
+..+...... ..... .|.|.++...|+|.|+|.|.|..|.....+.|.|..+|.
T Consensus 364 g~~l~~~~~~-~~~~~--~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~ 417 (527)
T 3qs9_E 364 RKSFPCEQKG-LDNGY--SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQ 417 (527)
T ss_dssp TEEEECBCCB-CSSSS--EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCE
T ss_pred CEECcCCccc-ccCCc--EEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCe
Confidence 9988553211 11233 789999999999999999999999999899998887664
No 135
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.47 E-value=5.7e-14 Score=106.43 Aligned_cols=128 Identities=9% Similarity=0.025 Sum_probs=80.7
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeec--CCeEEecCCcEEEEEEEeccCCCeeEEEe
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLL--RPRVMQVRQTCKLLCCLSGKPPPTVKWYK 93 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~i~W~~ 93 (168)
.|.+.++...|.|. |.| ...+. ........+..+|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|+|
T Consensus 291 ~L~I~~v~~~D~G~--Y~C---~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k 362 (423)
T 3qs7_E 291 FAFVSSVARNDTGY--YTC---SSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF 362 (423)
T ss_dssp EEEESSCCTTTCEE--EEE---EETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEE
T ss_pred EEEEeecCHHHCEE--EEE---EEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEE
Confidence 35666777777665 422 22232 2222233445567765544 34567789999999999999999999999
Q ss_pred CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCchh
Q psy12421 94 GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEESKE 154 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~ 154 (168)
++..+....... .+.. .+........|+|.|+|.|.|..|....++.|.|...|..+.
T Consensus 363 ~g~~l~~~~~~~--~~~~-~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~ 420 (423)
T 3qs7_E 363 SRKSFPCEQKGL--DNGY-SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHH 420 (423)
T ss_dssp TTEEEECBCCBC--SSSS-EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC---------
T ss_pred CCEECCCccccc--cCCc-EEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcccc
Confidence 999885432100 0110 222355677899999999999999999999999988876653
No 136
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.47 E-value=3.5e-13 Score=93.09 Aligned_cols=94 Identities=27% Similarity=0.485 Sum_probs=75.8
Q ss_pred cCCCeEEeec----CCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC----eEEEecCCEEEEEEccCCCCCCeE
Q psy12421 55 ESAPNFTFLL----RPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD----YSMSYSDGVVSMEIIDCKPEDSGE 126 (168)
Q Consensus 55 ~~~p~~~~~~----~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~----~~~~~~~~~~~l~i~~~~~~d~G~ 126 (168)
..+|.|...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ........ .|.|.+++..|+|.
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~ 90 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHW--SLIMESVVPSDKGN 90 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGT--EEEECSCCGGGCEE
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcc--eEEEecCCcccCEE
Confidence 3467776555 67889999999999999999999999999999875421 12222333 79999999999999
Q ss_pred EEEEEEeCCcceEEEEEEEEeeCC
Q psy12421 127 YKCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 127 Y~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
|+|.+.|..|.......|.|...+
T Consensus 91 Y~C~~~n~~~~~~~~~~l~V~~~~ 114 (231)
T 3ojm_B 91 YTCVVENEYGSINHTYHLDVVERS 114 (231)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCC
T ss_pred EEEEEecccCcccccEEEEEEcCC
Confidence 999999999998888888887644
No 137
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.47 E-value=1.4e-12 Score=102.22 Aligned_cols=93 Identities=29% Similarity=0.461 Sum_probs=83.9
Q ss_pred ccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 54 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
...+|.|...+.+..+..|+++.+.|.+.|.|.|.+.|++++..+.. .++.+...+..++|.|.++...|+|.|+|.|.
T Consensus 479 ~~~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~ 558 (573)
T 3uto_A 479 SEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAK 558 (573)
T ss_dssp GGGSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cccCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEE
Confidence 34578888888899999999999999999999999999999999865 45667777888899999999999999999999
Q ss_pred eCCcceEEEEEEEE
Q psy12421 133 NKHGTDETNCVVIV 146 (168)
Q Consensus 133 n~~g~~~~~~~l~v 146 (168)
|..|..+..+.|.|
T Consensus 559 N~~G~~~~~v~l~V 572 (573)
T 3uto_A 559 NSYGTKEEIVFLNV 572 (573)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEE
Confidence 99999999998877
No 138
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.47 E-value=2.7e-13 Score=91.06 Aligned_cols=114 Identities=12% Similarity=0.136 Sum_probs=82.7
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR 96 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~ 96 (168)
+.+.+++..|.|. |.|....... ...+.+. .+ ..+....+.+|+.+.|.|.+.+.|.|.+.|++++.
T Consensus 70 L~i~~v~~~D~G~--Y~C~~~~~~~--~~~l~V~--------~~-~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~ 136 (184)
T 2ny1_B 70 LIIKNLKIEDSDT--YICEVEDQKE--EVQLLVF--------GL-TANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRG 136 (184)
T ss_dssp EEECSCCGGGCEE--EEEEETTEEE--EEEEEEE--------EE-EESSCSEEETTCCEEEEEECCTTCCCEEEEECTTS
T ss_pred EEEecCCHHHCEE--EEEEEEcCCC--cEEEEEE--------Ee-cCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCC
Confidence 7788888888666 4333322211 1222222 11 12445678899999999999999999999999864
Q ss_pred ECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCc
Q psy12421 97 ELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 97 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 152 (168)
.+ ....+ .|.|.++..+|+|.|+|.|.|..+.....+.|.|.+.|..
T Consensus 137 ~~-------~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 137 KN-------IQGGK--TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA 183 (184)
T ss_dssp CE-------EEESS--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC-
T ss_pred cc-------ccCce--EEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCC
Confidence 32 12333 7999999999999999999999999999999999887754
No 139
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.47 E-value=3e-13 Score=100.90 Aligned_cols=92 Identities=25% Similarity=0.491 Sum_probs=70.9
Q ss_pred CCeEEe-ecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-ECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 57 APNFTF-LLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-ELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 57 ~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
+|.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|++++. .+... .......+ .|.|.++..+|+|.|+|.|.|.
T Consensus 204 ~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~-~~~~~~~~--~L~I~~v~~~D~G~Y~C~a~N~ 280 (384)
T 3kld_A 204 EPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARK-ARRHKSNG--ILEIPNFQQEDAGSYECVAENS 280 (384)
T ss_dssp EEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTT-CEECTTSC--EEEECSCCGGGCEEEEEEEEET
T ss_pred CCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCcccccc-ceecCCCc--EEEECCCChhhCEEEEEEEEcC
Confidence 344443 3445678899999999999999999999999543 44332 22222334 7999999999999999999999
Q ss_pred CcceEEEEEEEEeeCCC
Q psy12421 135 HGTDETNCVVIVESEEE 151 (168)
Q Consensus 135 ~g~~~~~~~l~v~~~p~ 151 (168)
.|.......|.|..+|.
T Consensus 281 ~G~~~~~~~l~v~~~P~ 297 (384)
T 3kld_A 281 RGKNVAKGQLTFYAQPN 297 (384)
T ss_dssp TEEEEEEEEEEEEEEEE
T ss_pred CCeEEEEEEEEEecCCc
Confidence 99998888888877654
No 140
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.47 E-value=3e-13 Score=96.74 Aligned_cols=130 Identities=16% Similarity=0.202 Sum_probs=88.5
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCc-ceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREP-LQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG 94 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~ 94 (168)
.+.+.++...|.|. |.| .+.+... .........+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++
T Consensus 63 ~L~i~~~~~~D~G~--Y~C---~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~ 137 (291)
T 1qz1_A 63 TLTIYNANIDDAGI--YKC---VVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHK 137 (291)
T ss_dssp EEEECSCCGGGCEE--EEE---EEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEET
T ss_pred EEEEecCCCCCCEE--EEE---EEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEEC
Confidence 45566677777555 422 2333221 11222223445678888888888899999999999999999999999999
Q ss_pred CEECCCC--CeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcce--EEEEEEEEeeCCCc
Q psy12421 95 NRELSKR--DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD--ETNCVVIVESEEES 152 (168)
Q Consensus 95 ~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~~~p~~ 152 (168)
+..+... .......++ .|.|.++...|+|.|+|.+.|..+.. ...+.|.|..+|..
T Consensus 138 ~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~ 197 (291)
T 1qz1_A 138 GRDVILKKDVRFIVLSNN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTV 197 (291)
T ss_dssp TSCSSTTCCTTEEECTTS--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEE
T ss_pred CEEcccCCCceEEEccCC--cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcc
Confidence 9876431 122223344 69999999999999999999986543 34556666655443
No 141
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.46 E-value=8.4e-13 Score=89.00 Aligned_cols=91 Identities=21% Similarity=0.316 Sum_probs=73.0
Q ss_pred CCCeEEeecCCeEEec-CCcEEEEEEEeccCC--CeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQV-RQTCKLLCCLSGKPP--PTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~-g~~~~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
.+|.|.. +....+.+ |+.+.|.|.+.+.|. +.+.|++++..+....... ....|.|.++...|+|.|.|.+.
T Consensus 2 ~~P~i~~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~ 76 (190)
T 2wv3_A 2 NEPRIVT-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA----SNMEYRINKPRAEDSGEYHCVYH 76 (190)
T ss_dssp -CCEEEE-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC----SEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCcccc-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe----ccEEEEEecCCcccCEEEEEEEE
Confidence 4677765 44455556 999999999999887 8899999999887644321 33489999999999999999999
Q ss_pred eCCcceEEEEEEEEeeCCCc
Q psy12421 133 NKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~p~~ 152 (168)
|. |.....+.|.|..+|..
T Consensus 77 n~-~~~~~~~~l~V~~~p~~ 95 (190)
T 2wv3_A 77 FV-SAPKANATIEVKAAPDI 95 (190)
T ss_dssp ET-TEEEEEEEEEEECCCEE
T ss_pred eC-CcccccEEEEEecCCcc
Confidence 99 88888888998876643
No 142
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.46 E-value=2.6e-13 Score=98.79 Aligned_cols=97 Identities=24% Similarity=0.272 Sum_probs=74.5
Q ss_pred ecccCCCeEEeec-CCeEEecCCcEEEEEEEeccCCCe-eEEEeCCEECCCCCeEEEecCCEEEEEEc-cCCCCCCeEEE
Q psy12421 52 ETVESAPNFTFLL-RPRVMQVRQTCKLLCCLSGKPPPT-VKWYKGNRELSKRDYSMSYSDGVVSMEII-DCKPEDSGEYK 128 (168)
Q Consensus 52 ~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~G~Y~ 128 (168)
..+..+|.+...+ ....+..|+.+.|.|.+.|.|.|. +.|++++..+.... ...++ .|.|. ++...|+|.|+
T Consensus 226 l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~---~~~~~--~L~i~~~v~~~d~G~Y~ 300 (331)
T 3u83_A 226 LNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV---EAQNR--TLFFKGPINYSLAGTYI 300 (331)
T ss_dssp CCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---EEETT--EEEECSCCCGGGCEEEE
T ss_pred EEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc---eecCc--EEEEeCCCccccCeEEE
Confidence 3445567766443 345578899999999999999998 99999998775432 22344 79999 89999999999
Q ss_pred EEEEeCCcceEEEEEEEEeeCCCch
Q psy12421 129 CVATNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 129 C~a~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
|.|.|..|.....+.|.|...+...
T Consensus 301 C~a~N~~G~~~~~~~l~V~~~~~~~ 325 (331)
T 3u83_A 301 CEATNPIGTRSGQVEVNITEAAALE 325 (331)
T ss_dssp EEEEETTEEEEEEEEECCBC-----
T ss_pred EEEEeccccceEEEEEEEeccchhh
Confidence 9999999999999999998766543
No 143
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=3.3e-13 Score=82.36 Aligned_cols=80 Identities=18% Similarity=0.341 Sum_probs=64.6
Q ss_pred CeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 66 PRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
+..+.+|+.+.|.|.+. .|.+.+.|+|++..+.. .++.+...+....|.|.++...|+|.|+|.|. ....++.|
T Consensus 20 ~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~----~~~~~~~l 94 (102)
T 2eo1_A 20 EVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAG----GQQLSFRL 94 (102)
T ss_dssp EEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEET----TEECCEEE
T ss_pred cEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcC----CCcEEEEE
Confidence 35788999999999997 88999999999998865 34455545555689999999999999999984 44566788
Q ss_pred EEeeCC
Q psy12421 145 IVESEE 150 (168)
Q Consensus 145 ~v~~~p 150 (168)
.|.+++
T Consensus 95 ~V~~p~ 100 (102)
T 2eo1_A 95 QVAGQC 100 (102)
T ss_dssp EEESCC
T ss_pred EEeCCC
Confidence 887765
No 144
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.46 E-value=4.7e-15 Score=119.10 Aligned_cols=136 Identities=21% Similarity=0.330 Sum_probs=0.0
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcc-eeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPL-QITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN 95 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~ 95 (168)
+.+.++...|.|.+.+ ........... ....+...+..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|+|++
T Consensus 627 L~i~~~~~~d~G~Y~C--~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g 704 (772)
T 3v2a_R 627 MELKNASLQDQGDYVC--LAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDN 704 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEECCCCccCCcEEEE--EEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECC
Confidence 7788899999776443 32221111100 01111112356788888888888999999999999999999999999999
Q ss_pred EECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCchhh
Q psy12421 96 RELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEESKEQ 155 (168)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~ 155 (168)
..+..... +....+...|.|.++..+|+|.|+|.|.|..|....++.|.|.++|.....
T Consensus 705 ~~l~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~~~ 763 (772)
T 3v2a_R 705 ETLVEDSG-IVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTNL 763 (772)
T ss_dssp ------------------------------------------------------------
T ss_pred eECcCCCC-eEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCcccc
Confidence 88765432 112222337999999999999999999999999999999999988776544
No 145
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.46 E-value=5.6e-13 Score=89.45 Aligned_cols=93 Identities=19% Similarity=0.451 Sum_probs=68.0
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC--CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK--RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ........++ .|.|.++...|+|.|.|.+.|.
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~~ 79 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN--NLQILNINKSDEGIYRCEGRVE 79 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS--CEEETTCCGGGCEEEEEEEEET
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC--CEEEeeCCHhHCcEEEEEEEEc
Confidence 57888888899999999999999999999999999999877643 1212222334 6999999999999999999998
Q ss_pred CcceE--EEEEEEEeeCCC
Q psy12421 135 HGTDE--TNCVVIVESEEE 151 (168)
Q Consensus 135 ~g~~~--~~~~l~v~~~p~ 151 (168)
.+... ....+.+..+|.
T Consensus 80 ~~~~~~~~~~~l~v~~~p~ 98 (189)
T 2v5t_A 80 ARGEIDFRDIIVIVNVPPA 98 (189)
T ss_dssp TTTEEEEEEEEEEEEEEEE
T ss_pred CCCceEEEEEEEEecCCCC
Confidence 75543 344555655543
No 146
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.46 E-value=3.6e-13 Score=90.69 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=74.3
Q ss_pred ccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 54 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
...+|.|...+.. .+.+|+++.|.|.+.+ +.+.+.|+|++.. .....+ .|.|.+++..|+|.|+|.+.|
T Consensus 5 ~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~-------~~~~~~--~L~i~~v~~~D~G~Y~C~a~n 73 (184)
T 2gi7_A 5 PLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS-------RYQDQA--VLFIPAMKRSLAGRYRCSYQN 73 (184)
T ss_dssp CBCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC-------CEESSS--EEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc-------ccCccc--EEEECcCChhhCceEEEEEEc
Confidence 3457888777764 8899999999999888 8899999999854 112333 799999999999999999999
Q ss_pred CCcce--EEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 134 KHGTD--ETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 134 ~~g~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
..|.. ...+.|.|......+.....+...+.+|+
T Consensus 74 ~~g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~ 109 (184)
T 2gi7_A 74 GSLWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGG 109 (184)
T ss_dssp TTEEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTT
T ss_pred CCCccCCCCCEEEEecCcCCCCEEEeCCCceecCCC
Confidence 87642 34566777554333333233444666665
No 147
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.46 E-value=3.4e-14 Score=102.68 Aligned_cols=97 Identities=20% Similarity=0.264 Sum_probs=74.9
Q ss_pred ecccCCCeEEeecC-CeEEecCCcEEEEEEEeccCCC-eeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEE
Q psy12421 52 ETVESAPNFTFLLR-PRVMQVRQTCKLLCCLSGKPPP-TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 52 ~~~~~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 129 (168)
..+..+|.+...+. ...+..|+.+.|.|.+.|.|.| .+.|+|++..+..... ..++ ..|.|.+++..|+|.|+|
T Consensus 206 l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~---~~~~-~~l~i~~v~~~d~G~Y~C 281 (308)
T 4fom_A 206 LDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL---ASDN-TLHFVHPLTFNYSGVYIC 281 (308)
T ss_dssp CCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB---CSTT-EEECCSCCCSCCCSEEEE
T ss_pred EEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE---EcCC-eEEEECCCChhhCEEEEE
Confidence 35566777765443 3566778999999999999998 6999999877654321 1223 256788899999999999
Q ss_pred EEEeCCcceEEEEEEEEeeCCCc
Q psy12421 130 VATNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 130 ~a~n~~g~~~~~~~l~v~~~p~~ 152 (168)
.|.|..|....++.|.|.++|+.
T Consensus 282 ~A~N~~G~~~~~~~l~V~~~P~~ 304 (308)
T 4fom_A 282 KVTNSLGQRSDQKVIYISDPPHH 304 (308)
T ss_dssp EEEETTEEEEEEEECCEECCC--
T ss_pred EEEeCCCcEEEEEEEEEEcCCCC
Confidence 99999999999999999998864
No 148
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.46 E-value=1.5e-13 Score=96.26 Aligned_cols=127 Identities=16% Similarity=0.179 Sum_probs=79.4
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCc--ceeeEeeeccc---CCCeEEee-cCCeEEecCCcEEEEEEEeccCCCe
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREP--LQITFWQETVE---SAPNFTFL-LRPRVMQVRQTCKLLCCLSGKPPPT 88 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p~ 88 (168)
..|.+.+++..|.|. |.|.......... .....+...+. .+|.+... +....+.+|+.+.|.|.+.+.|.|.
T Consensus 90 ~~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~ 167 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGR--YWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANAN 167 (250)
T ss_dssp CCEEECSCCGGGCEE--EEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCE
T ss_pred ceEEEeeCChhhCeE--EEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCe
Confidence 368888999999776 4333322111111 11111112222 23444433 3346667899999999999999999
Q ss_pred eEEEeCCEECCCCC-----------------------eEEEe-cCCEEEEEEccCCCCCCeEEEEEEEeCCc---ceEEE
Q psy12421 89 VKWYKGNRELSKRD-----------------------YSMSY-SDGVVSMEIIDCKPEDSGEYKCVATNKHG---TDETN 141 (168)
Q Consensus 89 i~W~~~~~~~~~~~-----------------------~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g---~~~~~ 141 (168)
+.|++++..+.... ..... ... .|.|.++..+|+|.|+|.|.|..| ....+
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~ 245 (250)
T 2fbo_J 168 VTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGAR--NLVIRAAKITDAGRVWCELATGQGELDADRSS 245 (250)
T ss_dssp EEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTT--EEEECSCCGGGCEEEEEEEESSSSGGGEEEEE
T ss_pred eEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCcc--EEEEecCCcccCEEEEEEecCCccccCcccee
Confidence 99999988664311 00111 123 799999999999999999999555 44555
Q ss_pred EEEE
Q psy12421 142 CVVI 145 (168)
Q Consensus 142 ~~l~ 145 (168)
+.|.
T Consensus 246 ~~l~ 249 (250)
T 2fbo_J 246 TILK 249 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5543
No 149
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.45 E-value=6e-14 Score=102.38 Aligned_cols=89 Identities=18% Similarity=0.376 Sum_probs=69.1
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCeeEEEe----CCEECCCCCe---EEEec-------CCEEEEEEccCCCCCCeEEEE
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYK----GNRELSKRDY---SMSYS-------DGVVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~----~~~~~~~~~~---~~~~~-------~~~~~l~i~~~~~~d~G~Y~C 129 (168)
+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..... .+... .....|.|.++...|+|.|+|
T Consensus 229 ~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 308 (334)
T 1ry7_B 229 PANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTC 308 (334)
T ss_dssp SCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEE
T ss_pred CCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEE
Confidence 456788999999999999999999999999 5555432211 11111 111269999999999999999
Q ss_pred EEEeCCcceEEEEEEEEeeCCCc
Q psy12421 130 VATNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 130 ~a~n~~g~~~~~~~l~v~~~p~~ 152 (168)
.|.|..|....++.|.|...+..
T Consensus 309 ~a~N~~G~~~~~~~l~V~~~~~~ 331 (334)
T 1ry7_B 309 LAGNSIGFSHHSAWLVVLPAEEE 331 (334)
T ss_dssp EEEESSCCEEEEEEEEEECSCCC
T ss_pred EEeCCCCeEEEEEEEEEEECCCC
Confidence 99999999999999999876643
No 150
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.45 E-value=2.7e-12 Score=86.25 Aligned_cols=93 Identities=20% Similarity=0.389 Sum_probs=74.2
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEe-CCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCc
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK-GNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 136 (168)
.|...+.+..+.+|+.+.|.|.+.+.|. .+.|++ ++..+.. .++.+...+....|.|.++...|+|.|+|.+.|..|
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 4555677788999999999999999877 999999 6766654 445555555566899999999999999999999988
Q ss_pred ce-EEEEEEEEeeCCCc
Q psy12421 137 TD-ETNCVVIVESEEES 152 (168)
Q Consensus 137 ~~-~~~~~l~v~~~p~~ 152 (168)
.. ...+.|.|..+|..
T Consensus 83 ~~~~~~~~l~v~~~p~~ 99 (189)
T 2v44_A 83 QTQEATVVLEIYQKLTF 99 (189)
T ss_dssp CEEEEEEEEEEECCCEE
T ss_pred CcEEEEEEEEEecCCce
Confidence 76 56777888766543
No 151
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.44 E-value=4.4e-13 Score=92.09 Aligned_cols=90 Identities=27% Similarity=0.452 Sum_probs=70.3
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEE-eccCCCeeEEEeCCEECCC--------CCeEEEecCCEEEEEEccCCCCCCeEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCL-SGKPPPTVKWYKGNRELSK--------RDYSMSYSDGVVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~--------~~~~~~~~~~~~~l~i~~~~~~d~G~Y 127 (168)
+|.+...+....+..|+.+.|.|.+ .|.|.|.+.|++++..+.. .........+ .|.|.++..+|+|.|
T Consensus 108 ~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y 185 (217)
T 2vr9_A 108 RDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGG--NLLISNVEPIDEGNY 185 (217)
T ss_dssp CCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTT--EEEESSCCSTTCEEE
T ss_pred CCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCC--cEEEeeCCHHHCeEE
Confidence 4455555667788999999999998 8999999999999988762 1112222344 799999999999999
Q ss_pred EEEEEeCCcceEEEEEEEEee
Q psy12421 128 KCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 128 ~C~a~n~~g~~~~~~~l~v~~ 148 (168)
+|.|.|..|....+..+.+..
T Consensus 186 ~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 186 KCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp EEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEcccceeccccEEEEEE
Confidence 999999999987766555544
No 152
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.43 E-value=1.3e-12 Score=105.89 Aligned_cols=97 Identities=24% Similarity=0.436 Sum_probs=80.0
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC-eEEE---ec--CCEEEEEEccCCCCCCeEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD-YSMS---YS--DGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~---~~--~~~~~l~i~~~~~~d~G~Y~ 128 (168)
..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+.... +... .. .....|.|.++...|+|.|+
T Consensus 427 ~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 506 (816)
T 3dmk_A 427 FDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYK 506 (816)
T ss_dssp SCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEE
T ss_pred cCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEE
Confidence 467888888888889999999999999999999999999999886533 2211 11 22346999999999999999
Q ss_pred EEEEeCCcceEEEEEEEEeeCCC
Q psy12421 129 CVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 129 C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
|.|.|..|....+..|.|..+|.
T Consensus 507 C~a~n~~g~~~~~~~l~V~~~p~ 529 (816)
T 3dmk_A 507 CIAKSKVGVAEHSAKLNVYGLPY 529 (816)
T ss_dssp EEEEETTEEEEEEEEEEECSSCE
T ss_pred EEEEECCCeEEEEEEEEEecCCe
Confidence 99999999999999999987663
No 153
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.43 E-value=4.9e-13 Score=99.68 Aligned_cols=134 Identities=23% Similarity=0.384 Sum_probs=91.9
Q ss_pred CCCceeEEEEeCCC-CCCCCCCccc-----ceeccCcceeeEeee--cccCCCeEEeec---CCeEEecCCcEEEEEEEe
Q psy12421 14 PQDNPRLRTRAIPK-TIPAYVPEVQ-----QVRRREPLQITFWQE--TVESAPNFTFLL---RPRVMQVRQTCKLLCCLS 82 (168)
Q Consensus 14 ~~~~~~~~~~~~d~-~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~p~~~~~~---~~~~~~~g~~~~l~C~~~ 82 (168)
...+++.++...|. +. |.|... .......+.+.+... ....+|.+.... ....+.+|+.+.|.|.+.
T Consensus 170 ~~~l~i~~v~~~d~~G~--Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~ 247 (404)
T 3p3y_A 170 NGDLYFSNVMLQDMQTD--YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIAS 247 (404)
T ss_dssp TSCEEESSCCSGGGSSC--BEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBC
T ss_pred CCcEEEEeeeeccCCcc--eEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEEC
Confidence 44567777777773 54 433221 111122233333211 112344443322 235688999999999999
Q ss_pred ccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 83 GKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 83 g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
|.|.|.+.|++++..+..........++ .|.|.++...|+|.|+|.|.|..|.....+.|.|..+|.
T Consensus 248 g~p~~~v~W~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 314 (404)
T 3p3y_A 248 GVPTPDIAWYKKGGDLPSDKAKFENFNK--ALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPY 314 (404)
T ss_dssp CSSCCEEEEEETTBCCCTTTEEEEGGGT--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEE
T ss_pred CCCCCcEEEEECCEECCCCcccccccCc--eEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCe
Confidence 9999999999999888765544444444 799999999999999999999999988889998887653
No 154
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.43 E-value=6.2e-13 Score=99.20 Aligned_cols=134 Identities=18% Similarity=0.286 Sum_probs=91.3
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccceec---cCcceeeEeeec-ccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCee
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQVRR---REPLQITFWQET-VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTV 89 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i 89 (168)
...+.+.++...|.+. |.|....... .....+.+.... ...++.+...+....+.+|+.+.|.|.+.+.|.|.+
T Consensus 176 ~~~L~i~~~~~~d~G~--Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~ 253 (403)
T 3laf_A 176 SGALQISRLQPGDSGV--YRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSF 253 (403)
T ss_dssp TSCEEECSCCGGGCEE--EEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEE
T ss_pred CceEEEcccccccCEE--EEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeE
Confidence 3456677777777655 4322211111 111222222111 111234555666788889999999999999999999
Q ss_pred EEEeCCEECCCCC-eEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 90 KWYKGNRELSKRD-YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 90 ~W~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
.|++++..+.... ......++ .|.|.++...|+|.|+|.|.|..|.......|.|..+|.
T Consensus 254 ~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 314 (403)
T 3laf_A 254 TWLRGEEVIQLRSKKYSLLGGS--NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPW 314 (403)
T ss_dssp EEEETTEECCCSSSSEEEETTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred EEEECCeeccCCCceEEECCcc--EEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCc
Confidence 9999999876532 22233344 799999999999999999999999998899998877653
No 155
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.43 E-value=1.7e-12 Score=102.66 Aligned_cols=118 Identities=13% Similarity=0.145 Sum_probs=85.7
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcce-eeEeeeccc-CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEe
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQ-ITFWQETVE-SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK 93 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~ 93 (168)
.+.+.++...|.|. |.+ .+.+..... .......+. .|+.+...+.+..+..|+.+.|.|.+.|.|.|.+.|++
T Consensus 521 ~L~i~~v~~~d~G~--Y~C---~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~ 595 (642)
T 1e07_A 521 TLTLFNVTRNDARA--YVC---GIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRI 595 (642)
T ss_pred EEEEeecChhcCce--EEE---EeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEE
Confidence 56677777777665 432 222222211 111111222 34456666777889999999999999999999999999
Q ss_pred CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 94 GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
+|..+... . .|.|.++...|+|.|+|.|.|..|....++.|.|..
T Consensus 596 ~g~~i~~~--------~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~v 640 (642)
T 1e07_A 596 NGIPQQHT--------Q--VLFIAKITPNNNGTYACFVSNLATGRNNSIVKSITV 640 (642)
T ss_pred CCEECccC--------c--eEEECcccccCCeEEEEEEEecccCcceeEEEEEEE
Confidence 99877542 2 689999999999999999999999998888887764
No 156
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.43 E-value=7.7e-13 Score=102.25 Aligned_cols=151 Identities=13% Similarity=0.182 Sum_probs=99.0
Q ss_pred CCCceeEEEEeCCCC-CCCCCCcccceecc---CcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCe-
Q psy12421 14 PQDNPRLRTRAIPKT-IPAYVPEVQQVRRR---EPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPT- 88 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~- 88 (168)
...+.+.++...|.+ . |.|....-... ....+.+. .....+|.|...+....+.+|+.+.|.|.+.|.|.|.
T Consensus 167 ~~~L~i~~~~~~d~G~~--Y~C~a~n~~~~~~s~~~~l~V~-~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~ 243 (524)
T 2ec8_A 167 KAGIMIKSVKRAYHRLC--LHCSVDQEGKSVLSEKFILKVR-PAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVY 243 (524)
T ss_dssp TTEEEEESCCGGGTTCE--EEEEEC----CCCCCCEECCEE-CCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCE
T ss_pred CccEEEeccchhhCCce--EEEEEEECCceEEEEEEEEEEE-eCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEE
Confidence 345667778888866 5 43222111111 11222221 1224688998888888899999999999999999887
Q ss_pred eEEEeCCEEC--CCCCeEEEe----cCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCchhhhh-hhhh
Q psy12421 89 VKWYKGNREL--SKRDYSMSY----SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEESKEQQE-LAHN 161 (168)
Q Consensus 89 i~W~~~~~~~--~~~~~~~~~----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~-~~~~ 161 (168)
+.|++++..+ ......... ......|.|.++...|+|.|+|.|.|..|.....+.|.|..+|.....+. ....
T Consensus 244 i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~ 323 (524)
T 2ec8_A 244 STWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTV 323 (524)
T ss_dssp EEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEE
T ss_pred EEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceE
Confidence 9999998763 221111111 11234799999999999999999999999998899999987765433221 1234
Q ss_pred cccCCC
Q psy12421 162 FLYSGE 167 (168)
Q Consensus 162 ~~~~g~ 167 (168)
.+.+|+
T Consensus 324 ~v~~G~ 329 (524)
T 2ec8_A 324 FVNDGE 329 (524)
T ss_dssp EECTTC
T ss_pred EEcCCC
Confidence 455554
No 157
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.43 E-value=2.6e-14 Score=97.44 Aligned_cols=125 Identities=18% Similarity=0.208 Sum_probs=80.5
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEE-eccCCCeeEEEe
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCL-SGKPPPTVKWYK 93 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~ 93 (168)
..+.+.++...|.|. |.|....... ...........+..+|.+........+..|+.+.|.|.+ .+.|.|.+.|++
T Consensus 68 ~~L~i~~~~~~d~G~--Y~C~~~~~~g-~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~ 144 (209)
T 1nbq_A 68 TGITFKSVTREDTGT--YTCMVSEEGG-NSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFK 144 (209)
T ss_dssp TEEECSCCCTTSCSE--EEEEEEETTS-SCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEE
T ss_pred cEEEEeeCCHHHCcE--EEEEEecCCC-CccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEE
Confidence 445667788888665 4333221110 111112222233455655444455678899999999996 899999999999
Q ss_pred CCEECCCCCe--------EEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 94 GNRELSKRDY--------SMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 94 ~~~~~~~~~~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
++..+..... ..........|.|.++...|.|.|+|.|.|..|....+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~ 201 (209)
T 1nbq_A 145 DGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSN 201 (209)
T ss_dssp TTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECC
T ss_pred CCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccc
Confidence 9987754211 011111222799999999999999999999999884433
No 158
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.43 E-value=1e-12 Score=87.64 Aligned_cols=79 Identities=13% Similarity=0.186 Sum_probs=61.0
Q ss_pred ecCCeEEecCCcEEEEEEEeccCCC-eeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcc-eEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPPP-TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT-DET 140 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~-~~~ 140 (168)
......+.+|+.+.|.|.+.+.+++ .+.|++++..+.. ..... .|.|.++..+|+|.|+|.|.|..|. ...
T Consensus 94 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~-----~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~ 166 (175)
T 1fnl_A 94 QAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY-----FHHNS--DFHIPKATLKDSGSYFCRGLVGSKNVSSE 166 (175)
T ss_dssp ECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE-----EEECC--CEEESSCCGGGCEEEEEEEEETTEEEECC
T ss_pred eCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC-----CCCCC--EEEEcccChhhCeEEEEEEEcCCCCccCc
Confidence 3345678899999999999987665 9999999987632 11233 6999999999999999999998665 444
Q ss_pred EEEEEEee
Q psy12421 141 NCVVIVES 148 (168)
Q Consensus 141 ~~~l~v~~ 148 (168)
.+.|.|.+
T Consensus 167 ~~~l~V~~ 174 (175)
T 1fnl_A 167 TVNITITQ 174 (175)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEeC
Confidence 66676654
No 159
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.42 E-value=2.7e-13 Score=93.08 Aligned_cols=86 Identities=13% Similarity=0.135 Sum_probs=67.3
Q ss_pred CeEEecCCcEEEEEE---EeccCCCeeEEEeCCEECC------------------CCCeEEEecCCEEEEEEccCCCCCC
Q psy12421 66 PRVMQVRQTCKLLCC---LSGKPPPTVKWYKGNRELS------------------KRDYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~---~~g~p~p~i~W~~~~~~~~------------------~~~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
+..+.+|+++.|.|. +.+.|.|.+.|+|++.... ...+.+....+...|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 457889999999995 5678999999999764221 0122333345566899999999999
Q ss_pred eEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 125 GEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
|.|.|.|.|..|.....+.|.|..+|.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~ 108 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLT 108 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCce
Confidence 999999999999999999998876543
No 160
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.42 E-value=1.5e-12 Score=93.92 Aligned_cols=88 Identities=23% Similarity=0.456 Sum_probs=70.6
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCC-eeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPP-TVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
+|.|..... ..+.+|+.+.|.|.+.|.|.| .+.|++++..+.. .++.+. .+...|.|.++...|+|.|+|.|.|.
T Consensus 222 ~p~~~~~~~-~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~ 298 (312)
T 2y23_A 222 GPHFVEYLS-WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDD 298 (312)
T ss_dssp SSEEEEEEE-EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEEST
T ss_pred CCceeecce-EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcC
Confidence 466664433 678899999999999999988 9999999998763 333322 44558999999999999999999999
Q ss_pred CcceEEEEEEEEe
Q psy12421 135 HGTDETNCVVIVE 147 (168)
Q Consensus 135 ~g~~~~~~~l~v~ 147 (168)
.|....++.|.+.
T Consensus 299 ~G~~~~~~~l~i~ 311 (312)
T 2y23_A 299 RGKDKSRLKLVDE 311 (312)
T ss_dssp TCCEEEEEEECSC
T ss_pred CCceeeeeEEEec
Confidence 9999998888653
No 161
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.42 E-value=1.4e-12 Score=93.25 Aligned_cols=136 Identities=17% Similarity=0.215 Sum_probs=86.7
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceec---cCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCC-CeeE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRR---REPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPP-PTVK 90 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~ 90 (168)
..+.+.++...|.+. |.|....... ...+.+.+.. ....+|.+...+....+.+|+.+.|.|.+.+.|. +.+.
T Consensus 144 ~~L~i~~~~~~d~G~--Y~C~a~n~~~~~~s~~~~l~V~~-~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~ 220 (292)
T 4dkd_C 144 HGFTIHRAKFIQSQD--YQCSALMGGRKVMSISIRLKVQK-VIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVF 220 (292)
T ss_dssp SCCEETTCCGGGCSE--EEEEECSTTSCEECCCEEEEEEC-CCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEE
T ss_pred ceEEECCCCHHHCeE--EEEEEEeCCCceeEEEEEEEEeC-CCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEE
Confidence 346777778888665 4332221000 1112222211 1123888888888877789999999999998665 5678
Q ss_pred EEeCCEECCCCCeEEEecC---CEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCch
Q psy12421 91 WYKGNRELSKRDYSMSYSD---GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 91 W~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
|++++..+........... ....|.|.++...|+|.|+|.|.|..|....++.|.|.......
T Consensus 221 w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~ 286 (292)
T 4dkd_C 221 LQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGNS 286 (292)
T ss_dssp CCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-------
T ss_pred EeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCCcc
Confidence 8888876643322111111 12379999999999999999999999999999999988765544
No 162
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.42 E-value=2.6e-13 Score=94.09 Aligned_cols=112 Identities=12% Similarity=-0.008 Sum_probs=73.9
Q ss_pred ccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEE--EEEEccCCCCCCeEEEEEE
Q psy12421 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVV--SMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 54 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~a 131 (168)
...+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|+|++..+.............. .|.|.+++.+|+|.|+|.+
T Consensus 6 ~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 6 DFPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp GSCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEE
Confidence 345678876666 57889999999999877 7889999998764422111110111122 6999999999999999999
Q ss_pred EeCCcceE--EEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 132 TNKHGTDE--TNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 132 ~n~~g~~~--~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
.|..|... ..+.|.|.+.+..+.....+...+.+|+
T Consensus 84 ~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~ 121 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGE 121 (218)
T ss_dssp EETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTC
T ss_pred EcCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCC
Confidence 99876433 3456777653333322223345667775
No 163
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.41 E-value=5e-13 Score=97.76 Aligned_cols=111 Identities=17% Similarity=0.159 Sum_probs=85.8
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEe-------ccCCCeeEEEeCCEEC--CCC-CeEEEecCCEEEEEEccCCCCCC
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLS-------GKPPPTVKWYKGNREL--SKR-DYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~-------g~p~p~i~W~~~~~~~--~~~-~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
...|.|...+.+..+.+|+.+.|.|.+. +.|.+.+.|++++..+ ... ...+...++ .|.|.+++..|+
T Consensus 16 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~ 93 (339)
T 3o4o_C 16 RSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDS 93 (339)
T ss_dssp --CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCC
T ss_pred hhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccC
Confidence 4568888889999999999999999998 8999999999998863 332 233434555 799999999999
Q ss_pred eEEEEEEEeCCcceEEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 125 GEYKCVATNKHGTDETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
|.|+|.+.|..|.....+.|.|...+............+.+|+
T Consensus 94 G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~ 136 (339)
T 3o4o_C 94 GTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLST 136 (339)
T ss_dssp EEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTS
T ss_pred EEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCC
Confidence 9999999999998888889999877655432222333555554
No 164
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.41 E-value=1.3e-13 Score=100.56 Aligned_cols=84 Identities=24% Similarity=0.476 Sum_probs=67.6
Q ss_pred eEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCe--EEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 67 RVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDY--SMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
..+.+|+.+.|.|.+.|.|.|.+.|++++..+..... ..........|.|.++...|+|.|+|.+.|..|.....+.|
T Consensus 133 ~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 212 (334)
T 1ry7_B 133 LAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTL 212 (334)
T ss_dssp EEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEE
T ss_pred EEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEE
Confidence 5688899999999999999999999999987754321 11112222379999999999999999999999998888888
Q ss_pred EEeeCC
Q psy12421 145 IVESEE 150 (168)
Q Consensus 145 ~v~~~p 150 (168)
.|...+
T Consensus 213 ~V~~~~ 218 (334)
T 1ry7_B 213 DVLERS 218 (334)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 887643
No 165
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.41 E-value=6.8e-13 Score=91.42 Aligned_cols=133 Identities=15% Similarity=0.198 Sum_probs=82.0
Q ss_pred CCceeEEEEeCCCCCCCCCCccccee-ccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEE-eccCCCeeEEE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVR-RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCL-SGKPPPTVKWY 92 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~ 92 (168)
..+.+.+++..|.|. |.|....-. ....+.+.+. ....+|.+...+ ...+..|+.+.|.|.+ .+.|.|.+.|+
T Consensus 72 ~sL~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~l~V~--~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~ 146 (222)
T 4i0k_A 72 ASLRLQRVRVTDEGS--YTCFVSIQDFDSAAVSLQVA--APYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWK 146 (222)
T ss_dssp CCEEECSCCGGGCSC--EEEEEEECCCCCCCCCCCCC--BCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEE
T ss_pred EEEEECCcccccCEE--EEEEEEeCCCceEEEEEEEE--cCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEE
Confidence 457788888888666 543332111 1111222221 112346665443 3467789999999999 78999999999
Q ss_pred e-CCEECCCCCe-EE-EecCC-EEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCc
Q psy12421 93 K-GNRELSKRDY-SM-SYSDG-VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 93 ~-~~~~~~~~~~-~~-~~~~~-~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 152 (168)
+ ++..+..... .. ....+ ...|.|.++...|.|.|+|.|.|..|.....+.|.|.++|..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 210 (222)
T 4i0k_A 147 DGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLT 210 (222)
T ss_dssp CTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC----
T ss_pred cCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccc
Confidence 9 4544433111 11 11222 235788999999999999999999999999999999877644
No 166
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.41 E-value=2.1e-13 Score=100.14 Aligned_cols=81 Identities=17% Similarity=0.330 Sum_probs=63.5
Q ss_pred CeEEecCCcEEEEEEE-----eccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC-cce-
Q psy12421 66 PRVMQVRQTCKLLCCL-----SGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH-GTD- 138 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~-----~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~-g~~- 138 (168)
...+.+|+.+.|.|.+ .|.|.|.+.|++++..+.... .+...+. .|.|.++..+|+|.|+|.|.|.. |..
T Consensus 129 ~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~-~~~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~~g~~~ 205 (349)
T 4dep_C 129 HKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFN-NVIPEGM--NLSFLIALISNNGNYTCVVTYPENGRTF 205 (349)
T ss_dssp EEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCS-SEEEETT--EEEEESCCGGGCEEEEEEEEEEETTEEE
T ss_pred ceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcc-ceeecCC--EEEEeeeeecCCcEEEEEEEEeeCCEEE
Confidence 4567889999999985 788999999999999886532 2333344 79999999999999999999987 544
Q ss_pred --EEEEEEEEeeC
Q psy12421 139 --ETNCVVIVESE 149 (168)
Q Consensus 139 --~~~~~l~v~~~ 149 (168)
...+.|.|...
T Consensus 206 ~~~~~~~l~v~~~ 218 (349)
T 4dep_C 206 HLTRTLTVKVVGS 218 (349)
T ss_dssp EEEEEEEEEEECC
T ss_pred EEEEEEEEEEEcc
Confidence 45666766653
No 167
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.41 E-value=2.9e-13 Score=92.13 Aligned_cols=81 Identities=17% Similarity=0.225 Sum_probs=60.0
Q ss_pred EEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 68 VMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 68 ~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
.+..|+.+.|.|.+.|.|.|.+.|++++..+.. .......+....+.+..+...|.|.|+|.|.|..|.....+.|.|.
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~ 192 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT-SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPL 192 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE-EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC-
T ss_pred ecCCCCeEEEEEEccccCCceEEEEeCCCCccC-ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEec
Confidence 345799999999999999999999998764422 1111112223456777888999999999999999999888888776
Q ss_pred eC
Q psy12421 148 SE 149 (168)
Q Consensus 148 ~~ 149 (168)
++
T Consensus 193 ~~ 194 (202)
T 3bp6_B 193 SR 194 (202)
T ss_dssp --
T ss_pred Cc
Confidence 54
No 168
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.41 E-value=1.6e-12 Score=88.30 Aligned_cols=118 Identities=11% Similarity=0.045 Sum_probs=71.4
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccce-----eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCe
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQV-----RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPT 88 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~ 88 (168)
...+.+.++...|.|. |.|..... .....+.+.+. ....+|.+...+ ...+.+|+.+.|.|.+.+. .+.
T Consensus 57 ~~~L~i~~v~~~D~G~--Y~C~a~n~~~g~~~~s~~~~l~V~--~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~ 130 (198)
T 1ugn_A 57 KGQFPIPSITWEHTGR--YRCYYGSDTAGRSESSDPLELVVT--GAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDG 130 (198)
T ss_dssp TTEEEESSCCGGGCEE--EEEEEEETTTEECCCCCCEEEEEE--CSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSE
T ss_pred ccEEEECCCCHHHCeE--EEEEEECCCCCcccCCccEEEEEc--ccccCCccccCC-ccccCCCCcEEEEEecCCC-CcE
Confidence 3456677888888666 43332211 11112222222 112245655443 4678899999999999888 789
Q ss_pred eEEEeCCEECCCCCeE--EEe-cCCEEEEEEccCCCCCCeEEEEEEEeCCcc
Q psy12421 89 VKWYKGNRELSKRDYS--MSY-SDGVVSMEIIDCKPEDSGEYKCVATNKHGT 137 (168)
Q Consensus 89 i~W~~~~~~~~~~~~~--~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 137 (168)
+.|+|++..+...... ... ......|.|.+++.+|+|.|+|.|.|..+.
T Consensus 131 v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~ 182 (198)
T 1ugn_A 131 FILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSP 182 (198)
T ss_dssp EEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTST
T ss_pred EEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCC
Confidence 9999999876432211 111 112347999999999999999999998763
No 169
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.40 E-value=2.9e-12 Score=87.96 Aligned_cols=94 Identities=26% Similarity=0.493 Sum_probs=73.0
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC---CeEEEecCCEE--EEEEccCCCCCCeEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR---DYSMSYSDGVV--SMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~---~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C 129 (168)
..+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .......++.. .|.|.+++..|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 46889998888999999999999999999999999999999988653 22333333321 13577889999999999
Q ss_pred EEEeCCcceE-EEEEEEEee
Q psy12421 130 VATNKHGTDE-TNCVVIVES 148 (168)
Q Consensus 130 ~a~n~~g~~~-~~~~l~v~~ 148 (168)
.+.|..|... ....|.|..
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~ 106 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAV 106 (217)
T ss_dssp EEEETTEEEECCCEEEEECE
T ss_pred EEecCCCccccccceEEEEE
Confidence 9999988753 355666654
No 170
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.40 E-value=1.1e-12 Score=99.67 Aligned_cols=96 Identities=18% Similarity=0.284 Sum_probs=73.2
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-ECCCC---CeEEEecCCEEEEEEccCCCCCCeEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-ELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCV 130 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-~~~~~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 130 (168)
+.+|.+...+.+..+.+|+++.|.|.+ +.|.|.+.|++++. .+... .......++ +|.|.+++.+|+|.|+|.
T Consensus 339 C~~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~--~L~I~~v~~~D~G~Y~C~ 415 (440)
T 3zyj_A 339 CYAPVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDG--TLNFTNVTVQDTGMYTCM 415 (440)
T ss_dssp CCCCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTTC--CEEESSCCSTTCEEEEEE
T ss_pred CCCCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccCC--eEEEccCChhhCEEEEEE
Confidence 457888888888999999999999999 67999999998543 32221 112233344 699999999999999999
Q ss_pred EEeCCcceEEEEEEEEeeCCCch
Q psy12421 131 ATNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 131 a~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
|.|..|....++.+.|.+.+.++
T Consensus 416 a~N~~G~~~~~~~~~v~~~~~~~ 438 (440)
T 3zyj_A 416 VSNSVGNTTASATLNVTGTHHHH 438 (440)
T ss_dssp EECSSCEEEEEEEEEEC------
T ss_pred EEcCCCcEEEEEEEEEecccccc
Confidence 99999999999999998876654
No 171
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.40 E-value=1.1e-12 Score=90.31 Aligned_cols=130 Identities=12% Similarity=0.080 Sum_probs=76.5
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC-
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG- 94 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~- 94 (168)
.|.+.+++..|.|. |.|... + ...........+..+|..........+..|+.+.|.|.+.|.|.|.+.|+++
T Consensus 81 ~L~I~~v~~~D~G~--Y~C~~~---~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~ 154 (222)
T 3sbw_C 81 ALQITDVKLQDAGV--YRCMIS---Y-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSD 154 (222)
T ss_dssp EEEESSCCGGGCEE--EEEEEE---S-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETT
T ss_pred EEEEcCcccccCeE--EEEEEE---e-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECC
Confidence 46777888888666 433322 2 1111111112222222211111112567899999999999999999999998
Q ss_pred CEECCCCCeE-EEe-cCC-EEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 95 NRELSKRDYS-MSY-SDG-VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 95 ~~~~~~~~~~-~~~-~~~-~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
+..+...... ... .++ ........+...|.|.|+|.|.|..|.......|.|.+.|.
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 155 HQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp CCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred CceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 5544432111 111 111 11222234457899999999999999999999998876553
No 172
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.40 E-value=2.2e-12 Score=93.69 Aligned_cols=148 Identities=11% Similarity=0.050 Sum_probs=91.1
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccc-------eeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCC
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQ-------VRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPP 86 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 86 (168)
...+.+.++...|.|. |.|.... ......+.+.+. ....+|.+...+... +.+|+.+.|.|.+. .+.
T Consensus 73 ~~~L~I~~v~~~D~G~--Y~C~a~~~~~~~~~~~~s~~~~l~V~--~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~ 146 (316)
T 3vh8_G 73 QESFNMSPVTTAHAGN--YTCRGSHPHSPTGWSAPSNPVVIMVT--GNHRKPSLLAHPGPL-VKSGERVILQCWSD-IMF 146 (316)
T ss_dssp SSCEEECSCCGGGCEE--EEEEEBCSSSSSSBCCCCCCEEEEEE--CSSCCCEEEEESCSE-EETTCCEEEEEEES-SCC
T ss_pred eEEEEECCCCcccCeE--EEEEEEcCCCCcceecCCCcEEEEEe--cCCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCC
Confidence 4456677888888666 4332111 011122222221 223456776555544 88999999999984 567
Q ss_pred CeeEEEeCCEECCCCCeE--EEecCCEEEEEEccCCCCCCeEEEEEEEeCCcce-----EEEEEEEEeeCCCchhhhhhh
Q psy12421 87 PTVKWYKGNRELSKRDYS--MSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD-----ETNCVVIVESEEESKEQQELA 159 (168)
Q Consensus 87 p~i~W~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~p~~~~~~~~~ 159 (168)
+.+.|++++..+...... .........|.|.++...|+|.|+|.|.|..|.. .....|.|...+..+.....+
T Consensus 147 ~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~ 226 (316)
T 3vh8_G 147 EHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQP 226 (316)
T ss_dssp SEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEES
T ss_pred cEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCC
Confidence 789999998766432111 1111123379999999999999999999998742 445567776544444333334
Q ss_pred hhcccCCC
Q psy12421 160 HNFLYSGE 167 (168)
Q Consensus 160 ~~~~~~g~ 167 (168)
...+.+|+
T Consensus 227 ~~~v~~G~ 234 (316)
T 3vh8_G 227 GPKVQAGE 234 (316)
T ss_dssp CSCCCTTS
T ss_pred CCeecCCC
Confidence 44667775
No 173
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.39 E-value=4.6e-13 Score=99.68 Aligned_cols=93 Identities=16% Similarity=0.304 Sum_probs=73.1
Q ss_pred ccCCCeEEeecCCeEEecCCcEEEEEEEec-cCCCeeEEEeCCEECCCCC--eEEEecCCEEEEEEccCCCCCCeEEEEE
Q psy12421 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPPTVKWYKGNRELSKRD--YSMSYSDGVVSMEIIDCKPEDSGEYKCV 130 (168)
Q Consensus 54 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p~i~W~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 130 (168)
+..+|.|...+.+..+.+|+.+.|.|.+.+ .|.+.+.|++++..+.... +.....++ +|.|.++...|+|.|+|.
T Consensus 3 v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~--~L~i~~~~~~D~G~Y~C~ 80 (395)
T 1bih_A 3 VDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEG--SLVFLRPQASDEGHYQCF 80 (395)
T ss_dssp --CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSC--CEEESSCCGGGCEEEEEE
T ss_pred cCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCc--eEEEecCCCCCCcEEEEE
Confidence 467899998888899999999999999998 8999999999998876532 22222333 799999999999999999
Q ss_pred EEeCCcceE-EEEEEEEee
Q psy12421 131 ATNKHGTDE-TNCVVIVES 148 (168)
Q Consensus 131 a~n~~g~~~-~~~~l~v~~ 148 (168)
+.|..|... ..+.|.+..
T Consensus 81 a~n~~g~~~s~~~~l~v~~ 99 (395)
T 1bih_A 81 AETPAGVASSRVISFRKTY 99 (395)
T ss_dssp EEETTEEEECCCEEEEEEE
T ss_pred EEeCCCeEEeEEEEEEEEE
Confidence 999988754 234555443
No 174
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.39 E-value=1.6e-12 Score=91.46 Aligned_cols=101 Identities=17% Similarity=0.250 Sum_probs=75.4
Q ss_pred EEeecCCeEEecCCcEEEEEEE-eccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcce
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCL-SGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 138 (168)
+...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .... .|.|.++...|.|.|.|.+.|..+..
T Consensus 85 ~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-----~~~~--~l~i~~~~~~d~G~Y~C~~~n~~~~~ 157 (262)
T 3rjd_A 85 LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-----HWNS--NLTILKTNISHNGTYHCSGMGKHRYT 157 (262)
T ss_dssp EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----EECC--CEEESSCCGGGCEEEEEEEESSSEEE
T ss_pred eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc-----CCCC--eEEEEECChhhCEEEEEEEeCCCCcc
Confidence 3345556778899999999999 67888999999998876421 1223 68999999999999999999999888
Q ss_pred EEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 139 ETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 139 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
...+.|.|...+..+.....+...+.+|+
T Consensus 158 ~~~~~l~V~~~~~~p~~~~~~~~~~~~g~ 186 (262)
T 3rjd_A 158 SAGISVTVKELFPAPVLNASVTSPLLEGN 186 (262)
T ss_dssp EECEEEEEECSSCCCEEEESSCSSEETTC
T ss_pred ccceEEEeccCCCCCeEeecCceeecCCC
Confidence 88888888865433333333344455664
No 175
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.39 E-value=1.1e-12 Score=88.66 Aligned_cols=109 Identities=11% Similarity=0.005 Sum_probs=73.0
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCc
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 136 (168)
+|.|...+.. .+.+|++++|.|.+.+ +.+.+.|+|++..+...............|.|.+++..|+|.|+|.+.|..|
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 81 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGEL 81 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCC
Confidence 5777777766 7889999999999875 4578999999876531100000122334799999999999999999998765
Q ss_pred ce--EEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 137 TD--ETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 137 ~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
.. ...+.|.|.+....+.....+...+.+|+
T Consensus 82 ~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~ 114 (188)
T 1oll_A 82 WSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGE 114 (188)
T ss_dssp ECCCCCCEEEEEESCSCCCEEEEESCSEEETTC
T ss_pred CCCCCCceEEEecccCCCCeEEECCCCccccCC
Confidence 43 34566777653322222233444566665
No 176
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.39 E-value=1.4e-12 Score=105.56 Aligned_cols=128 Identities=16% Similarity=0.222 Sum_probs=91.1
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR 96 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~ 96 (168)
+.+.++...|.+. | .+.+.+............+..+|.|...+.+..+..|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 679 L~i~~v~~~d~G~--Y---~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~ 753 (816)
T 3dmk_A 679 LTIEAVEASHAGN--F---TCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVG 753 (816)
T ss_dssp EEEESCCGGGCEE--E---EEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECS
T ss_pred EEEccCChhhCEE--E---EEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCC
Confidence 4455555566444 3 3334444333333334456678999888888899999999999999999999999999875
Q ss_pred ECCCCC------eEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 97 ELSKRD------YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 97 ~~~~~~------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
.+.... ......++ .|.|.++...|+|.|+|.|.|..|....++.+..+..+.
T Consensus 754 ~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~~~~~~~~ 812 (816)
T 3dmk_A 754 DTPGEYKDLKKSDNIRVEEG--TLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAHH 812 (816)
T ss_dssp SSTTCCBCCCCBTTEEEETT--EEEECSCCGGGCEEEEEEEECSSSSCEEEEEEEEEEC--
T ss_pred CCCccccccccCCCEEecCC--EEEECcCChhhCeEEEEEEEeCCCCCcEEEEEEEeeccc
Confidence 432211 01222444 799999999999999999999999999888777665543
No 177
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.39 E-value=3.5e-12 Score=99.67 Aligned_cols=127 Identities=17% Similarity=0.143 Sum_probs=84.9
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeeccc-CCCeEEeecCCeEEecCCcEEEEEEEe----ccCCCeeEE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVE-SAPNFTFLLRPRVMQVRQTCKLLCCLS----GKPPPTVKW 91 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~g~~~~l~C~~~----g~p~p~i~W 91 (168)
|.+.++...|.|. |.|. . +............+. .+|.+. .+....+.+|+.+.|.|.+. +.|.|.+.|
T Consensus 408 L~I~~v~~~D~G~--Y~C~---a-n~~g~~~~~~~l~V~~~~p~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W 480 (585)
T 2ocw_A 408 VILNQLTSRDAGF--YWCL---T-NGDTLWRTTVEIKIIEGEPNLK-VPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKW 480 (585)
T ss_pred EEECCCChhhCEE--EEEc---c-cCCCccceeEEEEEecCccccc-cCCceeEecCCcEEEEEEecCCCCCCccEEEEE
Confidence 5566777788665 4332 2 111111111122222 345544 36677899999999999986 778899999
Q ss_pred EeCCEECCCCC-------eEEEe-cCCEEEEEEccCCCCCCeEEEEEEEeCCcceEE-EEEEEEeeCC
Q psy12421 92 YKGNRELSKRD-------YSMSY-SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET-NCVVIVESEE 150 (168)
Q Consensus 92 ~~~~~~~~~~~-------~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p 150 (168)
++++..+.... +.... .+....|.|.++..+|+|.|+|.|.|..|.... .+.|.|..+|
T Consensus 481 ~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 481 NNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred eecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 99998764321 11111 223358999999999999999999999987654 4889998776
No 178
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.39 E-value=1.2e-13 Score=93.99 Aligned_cols=108 Identities=15% Similarity=0.178 Sum_probs=74.8
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC--CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK--RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
.+|.|...+. ..+.+|+++.|.|.+.+.|. .+.|+|++..+.. .........+ .|.|.++...|+|.|+|.+.|
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKG--QFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTT--EEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCccc--EEEECCCCHHHCeEEEEEEEC
Confidence 4677776665 47889999999999988775 6999999876631 1100111233 799999999999999999999
Q ss_pred CC-c--ceEEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 134 KH-G--TDETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 134 ~~-g--~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
.. | .....+.|.|...+..+.....+...+.+|+
T Consensus 80 ~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~ 116 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGG 116 (198)
T ss_dssp TTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTC
T ss_pred CCCCcccCCccEEEEEcccccCCccccCCccccCCCC
Confidence 87 6 3345677777764333332223334666775
No 179
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.38 E-value=2e-12 Score=85.51 Aligned_cols=117 Identities=18% Similarity=0.199 Sum_probs=76.5
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEe-ccCCCeeEEEe
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLS-GKPPPTVKWYK 93 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~ 93 (168)
..+++.++...|.|. |.|..........+.+.+ ..+|.+. ......+.+|+.+.|.|.+. +.|.+.+.|++
T Consensus 51 ~~~~~~~~~~~d~G~--Y~C~~~~~~~s~~~~l~v-----~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 122 (170)
T 3ry4_A 51 QPSYRFKANNNDSGE--YTCQTGQTSLSDPVHLTV-----LFEWLVL-QTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQ 122 (170)
T ss_dssp SSEEEEECCGGGCEE--EEEEETTSBCCCCEEEEE-----ECCSEEE-ECSCSEECTTCCEEEEEEEGGGCCEEEEEEEE
T ss_pred cceEEEecccccCeE--EEEEEeCCCceEeEEEEE-----ECCceEe-cCCCceeecCCeEEEEEECCCCCCCceEEEEE
Confidence 345667777777665 433332211122222222 2344433 34456788999999999995 55678999999
Q ss_pred CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcc-eEEEEEEEE
Q psy12421 94 GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT-DETNCVVIV 146 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v 146 (168)
++..+.. ..... .|.|.++...|+|.|+|.|.|..|. ....+.|.|
T Consensus 123 ~g~~~~~-----~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 123 NGKSQKF-----SHLDP--TFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp TTEEEEE-----ESSCC--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEccc-----cCCCC--eEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 9886542 11223 7999999999999999999999986 343455544
No 180
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=88.87 Aligned_cols=116 Identities=14% Similarity=0.165 Sum_probs=73.7
Q ss_pred CCceeEEEEeCCCCCCCCCCcccce----eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQV----RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVK 90 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 90 (168)
..+.+.++...|.|. |.|..... .....+.+.+. ....+|.+...+.. .+.+|+.++|.|.+.+ +.+.+.
T Consensus 58 ~~L~i~~v~~~D~G~--Y~C~a~n~~g~~~~s~~~~l~V~--~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~ 131 (196)
T 3p2t_A 58 ARFSIPSMTEDYAGR--YRCYYRSPVGWSQPSDPLELVMT--GAYSKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTFL 131 (196)
T ss_dssp EEEEESSCCGGGCEE--EEEEEEETTEEBCCCCCEEEEEE--CSSCCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEEE
T ss_pred EEEEeccCCcccCce--EEEEEeCCCcccCCCccEEEEec--CCCCCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEEE
Confidence 445666777788666 43322111 11112222221 22345666655543 7789999999999988 456899
Q ss_pred EEeCCEECCCCCeEE--EecCCEEEEEEccCCCCCCeEEEEEEEeCCc
Q psy12421 91 WYKGNRELSKRDYSM--SYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 91 W~~~~~~~~~~~~~~--~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 136 (168)
|+|++..+....... ........|.|.++..+|+|.|+|.|.|..+
T Consensus 132 w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 132 LCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred EEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 999997664332111 1112233799999999999999999999876
No 181
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.38 E-value=5.2e-12 Score=87.93 Aligned_cols=92 Identities=25% Similarity=0.465 Sum_probs=72.4
Q ss_pred CCCeEEee----cCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC----eEEEecCCEEEEEEccCCCCCCeEE
Q psy12421 56 SAPNFTFL----LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD----YSMSYSDGVVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 56 ~~p~~~~~----~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~----~~~~~~~~~~~l~i~~~~~~d~G~Y 127 (168)
.+|.|... +....+.+|+++.|.|.+.|.|.+.+.|++++..+.... ........ .|.|.++...|+|.|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y 87 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQW--SLVMESVVPSDRGNY 87 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGT--EEEECSCCGGGCEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccce--EEEEEeCCcccCEEE
Confidence 35666533 235788899999999999999999999999999875421 12222333 799999999999999
Q ss_pred EEEEEeCCcceEEEEEEEEeeC
Q psy12421 128 KCVATNKHGTDETNCVVIVESE 149 (168)
Q Consensus 128 ~C~a~n~~g~~~~~~~l~v~~~ 149 (168)
+|.+.|..|.......|.|...
T Consensus 88 ~C~~~~~~~~~~~~~~l~V~~~ 109 (241)
T 3grw_A 88 TCVVENKFGSIRQTYTLDVLER 109 (241)
T ss_dssp EEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEeecCCceEEEEEEEEecc
Confidence 9999999999888888888764
No 182
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.37 E-value=9.1e-13 Score=89.89 Aligned_cols=127 Identities=11% Similarity=0.041 Sum_probs=79.9
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecc-cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETV-ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG 94 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~ 94 (168)
.|.+.+++..|.+. |.+...... ...........+ ..++..........+..|..+.+.|.+.|.|.|.+.|+++
T Consensus 80 sL~I~~v~~~D~G~--Y~C~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~ 155 (218)
T 4frw_A 80 SVLLRNAVQADEGE--YECRVSTFP--AGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTE 155 (218)
T ss_dssp CEEESSCCGGGCEE--EEEEEEEET--TEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEES
T ss_pred EEEEeeccHHHCCc--eeEEEEecc--CceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEEC
Confidence 46677888888665 432221111 111111111111 2223333444556677789999999999999999999999
Q ss_pred CEECCCCCeEEEecC---CEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 95 NRELSKRDYSMSYSD---GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 95 ~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
+..+...... .... ..+.|.|..+...|.|.|+|.|.|..|.......+.|.
T Consensus 156 ~~~~~~~~~~-~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 156 VKGTTSSRSF-KHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp SCCEEEEEEE-ECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred CcccccCceE-ecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 8755432111 1111 12369999999999999999999999987766666553
No 183
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.37 E-value=6.2e-13 Score=92.14 Aligned_cols=89 Identities=10% Similarity=0.121 Sum_probs=59.0
Q ss_pred CeEEecCCcEEEEEEEec-cCCCeeEEEeCCE-ECCCCC-eEEEecCC-EEEEEEccCCCCCCeEEEEEEEeCCcceEEE
Q psy12421 66 PRVMQVRQTCKLLCCLSG-KPPPTVKWYKGNR-ELSKRD-YSMSYSDG-VVSMEIIDCKPEDSGEYKCVATNKHGTDETN 141 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g-~p~p~i~W~~~~~-~~~~~~-~~~~~~~~-~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 141 (168)
...+..|..+.|.|.+.| .|.|.+.|++++. .+.... ......++ ...+.+..++.+|+|.|+|.|.|..|.....
T Consensus 127 ~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~ 206 (226)
T 4f80_A 127 DVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKT 206 (226)
T ss_dssp EEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEE
T ss_pred eeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEE
Confidence 456778999999999988 5999999999654 333321 12222233 2234455678899999999999999999999
Q ss_pred EEEEEeeCCCchh
Q psy12421 142 CVVIVESEEESKE 154 (168)
Q Consensus 142 ~~l~v~~~p~~~~ 154 (168)
+.|.|.++-.+..
T Consensus 207 ~~v~v~ep~~~s~ 219 (226)
T 4f80_A 207 ASISIADPFFRSA 219 (226)
T ss_dssp EEECCCTTTC---
T ss_pred EEEEECCCCCCcc
Confidence 9998876543333
No 184
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.37 E-value=7.6e-13 Score=89.87 Aligned_cols=117 Identities=9% Similarity=0.024 Sum_probs=64.4
Q ss_pred CCceeEEEEeCCCCCCCCCCcccce----eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQV----RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVK 90 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 90 (168)
..+.+.++...|.|. |.|..... .....+.+.+. ....+|.+...+ ...+.+|+++.|.|.+.+.| +.+.
T Consensus 58 ~~L~i~~v~~~D~G~--Y~C~a~n~~g~~~~s~~~~l~V~--~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~ 131 (196)
T 2d3v_A 58 ARFSIPSMTEHHAGR--YRCYYYSPAGWSEPSDPLELVVT--GFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFI 131 (196)
T ss_dssp EEEEESSCCGGGCEE--EEEEEEETTEECBCCCCEEEEEE--CSSCCCEEEC------------CEEEEEESSCC-SEEE
T ss_pred cEEEeccCChhHCeE--EEEEEeCCCCcCCcCccEEEEec--CCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEE
Confidence 446677788888666 43332110 01112223322 212356665443 35788999999999999988 9999
Q ss_pred EEeCCEECCCCCeE-EEecC--CEEEEEEccCCCCCCeEEEEEEEeCCcc
Q psy12421 91 WYKGNRELSKRDYS-MSYSD--GVVSMEIIDCKPEDSGEYKCVATNKHGT 137 (168)
Q Consensus 91 W~~~~~~~~~~~~~-~~~~~--~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 137 (168)
|+|++..+...... ..... ....|.|.+++.+|+|.|+|.|.|..+.
T Consensus 132 W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 132 LTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp EEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTEE
T ss_pred EEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCCC
Confidence 99999876432111 11111 1247999999999999999999998653
No 185
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.37 E-value=3.4e-12 Score=88.01 Aligned_cols=88 Identities=19% Similarity=0.304 Sum_probs=72.2
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
...+.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .. .|.|.++...|+|.|.|.+.|.
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~------~~--~L~i~~v~~~d~G~Y~C~~~n~ 87 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN------TS--ELIFNAVHVKDAGFYVCRVNNN 87 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC------SS--EEEETTCCGGGCEEEEEEEECT
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC------CC--EEEEccCChhhCeEeEEEEEcC
Confidence 456888889999999999999999999999999999999998876532 22 7999999999999999999999
Q ss_pred Ccce-EEEEEEEEeeCC
Q psy12421 135 HGTD-ETNCVVIVESEE 150 (168)
Q Consensus 135 ~g~~-~~~~~l~v~~~p 150 (168)
.|.. .....|.|...+
T Consensus 88 ~~~~~s~~~~l~V~~~~ 104 (218)
T 3k0w_A 88 FTFEFSQWSQLDVCDIP 104 (218)
T ss_dssp TCCEECCCEEEEEECCC
T ss_pred CCCceeeEEEEEEEccC
Confidence 8764 445677776553
No 186
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.37 E-value=1.1e-11 Score=88.63 Aligned_cols=95 Identities=20% Similarity=0.382 Sum_probs=76.1
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEe-CCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK-GNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
.+|.+...+.+..+.+|+.+.|.|.+.|.|. .+.|++ ++..+.. .++.+...+....|.|.++...|+|.|+|.+.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 4788888898999999999999999999774 899999 6665544 344444455566899999999999999999999
Q ss_pred CCcce-EEEEEEEEeeCCC
Q psy12421 134 KHGTD-ETNCVVIVESEEE 151 (168)
Q Consensus 134 ~~g~~-~~~~~l~v~~~p~ 151 (168)
..|.. .....|.|..++.
T Consensus 82 ~~g~~~~~~~~l~v~~~~~ 100 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQKLT 100 (291)
T ss_dssp SSSCEEEEEEEEEEECCCB
T ss_pred ccCceEEEEEEEEecCCcc
Confidence 98876 4466777766554
No 187
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.37 E-value=2.6e-13 Score=99.24 Aligned_cols=84 Identities=21% Similarity=0.396 Sum_probs=65.4
Q ss_pred eEEecCCcEEEEEE-----EeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcc----
Q psy12421 67 RVMQVRQTCKLLCC-----LSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT---- 137 (168)
Q Consensus 67 ~~~~~g~~~~l~C~-----~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~---- 137 (168)
..+.+|+.+.|.|. +.|.|.+.+.|++++..+...........+...|.|.++...|+|.|+|.|.|..|.
T Consensus 130 ~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 209 (339)
T 3o4o_C 130 QILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYN 209 (339)
T ss_dssp EEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCE
T ss_pred eEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEE
Confidence 46789999999999 789999999999999887654222222222227999999999999999999999874
Q ss_pred eEEEEEEEEeeCC
Q psy12421 138 DETNCVVIVESEE 150 (168)
Q Consensus 138 ~~~~~~l~v~~~p 150 (168)
....+.|.|...+
T Consensus 210 ~~~~~~l~V~~~~ 222 (339)
T 3o4o_C 210 ITRSIELRIKKKK 222 (339)
T ss_dssp EEEEEEEEEECCC
T ss_pred EEEEEEEEEEcCC
Confidence 4566777776543
No 188
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.37 E-value=9.4e-12 Score=84.60 Aligned_cols=91 Identities=15% Similarity=0.141 Sum_probs=67.2
Q ss_pred ecCCeEEecCCcEEEEEEEeccCC-----CeeEEEeCCEEC-CC-CCeEEEec---CCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPP-----PTVKWYKGNREL-SK-RDYSMSYS---DGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~-----p~i~W~~~~~~~-~~-~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
.+....+.+|+.+.|.|.+.+.|. +.+.|++.+... .. .+..+... .+...|.|.+++.+|+|.|.|.+.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 334567889999999999999886 899999944333 22 22222221 144589999999999999999999
Q ss_pred eCCcceEEEEEEEEeeCCCch
Q psy12421 133 NKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~p~~~ 153 (168)
|..|.....+.|.|..++..+
T Consensus 88 ~~~~~~~~~~~l~V~~~~~~p 108 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASYMRI 108 (202)
T ss_dssp ETTEEEEEEEEEEEEBCCCCE
T ss_pred eCCCcceEEEEEEecCCCCcc
Confidence 999988888888888765433
No 189
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.37 E-value=2.4e-12 Score=87.73 Aligned_cols=93 Identities=18% Similarity=0.293 Sum_probs=71.2
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEEC------------C-CCCeEEEecCCEEEEEEccCCCCCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNREL------------S-KRDYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~------------~-~~~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
+.|...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ . ..+... ... .|.|.+++..|+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~--~L~i~~v~~~D~ 77 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTF--SSS--GITFSSVTRKDN 77 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEE--ETT--EEEESCCCGGGC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEe--ece--eEEEcccCcccC
Confidence 44556667788999999999999999999999999976542 1 122222 233 799999999999
Q ss_pred eEEEEEEEeCCc--ceEEEEEEEEeeCCCchh
Q psy12421 125 GEYKCVATNKHG--TDETNCVVIVESEEESKE 154 (168)
Q Consensus 125 G~Y~C~a~n~~g--~~~~~~~l~v~~~p~~~~ 154 (168)
|.|+|.+.|..| .....+.|.|..+|..+.
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~ 109 (212)
T 1f97_A 78 GEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPT 109 (212)
T ss_dssp EEEEEEEEETTSSSEEEEEEEEEEEBCCCCCE
T ss_pred eEEEEEEEccCCCcccEEEEEEEEEcCCCCcc
Confidence 999999999977 456677888887766544
No 190
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.36 E-value=4.4e-12 Score=81.36 Aligned_cols=92 Identities=16% Similarity=0.262 Sum_probs=66.1
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC--CE---EC--CCCCeEEEecCCEEEEEEccCCCCCCeEEEEE
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG--NR---EL--SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCV 130 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~--~~---~~--~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 130 (168)
..+...+....+.+|+++.|.|.+.+. +.+.||++ +. .+ ...++.+...+....|.|.+++.+|+|.|.|.
T Consensus 18 ~~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 95 (133)
T 3khq_A 18 SQIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCK 95 (133)
T ss_dssp CSEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEE
Confidence 356667778889999999999999886 88999987 22 12 23455555555667899999999999999999
Q ss_pred EEeCCcc----eEEEEEEEEeeCCC
Q psy12421 131 ATNKHGT----DETNCVVIVESEEE 151 (168)
Q Consensus 131 a~n~~g~----~~~~~~l~v~~~p~ 151 (168)
+.|..|. ......|.|...|.
T Consensus 96 a~n~~g~~~~~~g~gt~L~V~~~p~ 120 (133)
T 3khq_A 96 QKCDSANHNVTDSCGTELLVLGFST 120 (133)
T ss_dssp ESSCC-------CCCEEEEEC----
T ss_pred EEeCCCCcceeECCCEEEEEEeccc
Confidence 9998763 23345677776443
No 191
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.36 E-value=8.7e-13 Score=90.31 Aligned_cols=86 Identities=8% Similarity=0.134 Sum_probs=60.4
Q ss_pred eEEecCCcEEEEEEEeccCC---CeeEEEeCCEECCCCCeEEE-----ecCCEEEEEEccCCCCCCeEEEEEEEeCCcc-
Q psy12421 67 RVMQVRQTCKLLCCLSGKPP---PTVKWYKGNRELSKRDYSMS-----YSDGVVSMEIIDCKPEDSGEYKCVATNKHGT- 137 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g~p~---p~i~W~~~~~~~~~~~~~~~-----~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~- 137 (168)
..+.+|+.+.|.|.+.|.++ +.+.|++++..+........ .......|.|......|.|.|+|.|.|..|.
T Consensus 101 ~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~ 180 (202)
T 1vca_A 101 GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEM 180 (202)
T ss_dssp SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCC
T ss_pred eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCC
Confidence 56889999999999988643 37899999987643110000 0111234678888888899999999998876
Q ss_pred ------eEEEEEEEEeeCCCc
Q psy12421 138 ------DETNCVVIVESEEES 152 (168)
Q Consensus 138 ------~~~~~~l~v~~~p~~ 152 (168)
...+..|.|.++|..
T Consensus 181 ~~~~~~~~~~~~L~V~y~P~~ 201 (202)
T 1vca_A 181 DSVPTVRQAVKELQVYISPKN 201 (202)
T ss_dssp TTSCSEEEEEEECCEECCC--
T ss_pred CCcceeEeeEEEEEEecCCCC
Confidence 355778888888754
No 192
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.35 E-value=3.9e-12 Score=89.15 Aligned_cols=91 Identities=19% Similarity=0.221 Sum_probs=65.5
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEe--CCEECC-------------CCCeEEEecCCEEEEEEccCCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK--GNRELS-------------KRDYSMSYSDGVVSMEIIDCKP 121 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~--~~~~~~-------------~~~~~~~~~~~~~~l~i~~~~~ 121 (168)
++.+...+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+. ..++.........+|.|.++..
T Consensus 135 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 214 (247)
T 2ghw_B 135 ETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEP 214 (247)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCG
T ss_pred ceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCH
Confidence 4556666767789999999999999999999999999 444321 1233333344455799999999
Q ss_pred CCCeEEEEEEEeCCcceE-EEEEEEEe
Q psy12421 122 EDSGEYKCVATNKHGTDE-TNCVVIVE 147 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~~~-~~~~l~v~ 147 (168)
+|+|.|.|.|.|..+... ....|.|.
T Consensus 215 ~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 215 EDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred HHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 999999999998643322 23355554
No 193
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.35 E-value=7.9e-12 Score=85.25 Aligned_cols=96 Identities=23% Similarity=0.397 Sum_probs=71.9
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCC-----eEEEecCCEE---EEEEccCCCCCCeE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD-----YSMSYSDGVV---SMEIIDCKPEDSGE 126 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-----~~~~~~~~~~---~l~i~~~~~~d~G~ 126 (168)
..+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ......++.. .+.|.++...|+|.
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 457888888888999999999999999999999999999998875321 1222233311 13344568999999
Q ss_pred EEEEEEeCCcce-EEEEEEEEeeCC
Q psy12421 127 YKCVATNKHGTD-ETNCVVIVESEE 150 (168)
Q Consensus 127 Y~C~a~n~~g~~-~~~~~l~v~~~p 150 (168)
|.|.+.|..|.. .....|.|...+
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~~ 111 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAILR 111 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEEC
T ss_pred EEEEEECCCCceeecceEEEEEecc
Confidence 999999998875 446667776543
No 194
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.35 E-value=2e-12 Score=87.31 Aligned_cols=112 Identities=10% Similarity=0.095 Sum_probs=72.5
Q ss_pred CCceeEEEEeCCCCCCCCCCcccce----eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQV----RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVK 90 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 90 (168)
..+.+.++...|.|. |.|..... .....+.+.+. ....+|.+...+ +..+.+|+.+.|.|.+.+ +.+.+.
T Consensus 57 ~~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~s~~~~l~V~--~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~ 130 (188)
T 1oll_A 57 VKFYIPDMNSRMAGQ--YSCIYRVGELWSEPSNLLDLVVT--EMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFL 130 (188)
T ss_dssp EEEEESSCCGGGCEE--EEEEEEETTEECCCCCCEEEEEE--SCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEE
T ss_pred eEEEeCcCCcccCeE--EEEEecCCCCCCCCCCceEEEec--ccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEE
Confidence 345566788888666 43332110 11122333322 222367776555 466889999999999866 567999
Q ss_pred EEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 91 WYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 91 W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
|+|++..+.. ..........|.|.+++.+|+|.|+|.|.|..
T Consensus 131 w~k~g~~~~~---~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 131 LLKEGRSSHV---QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EEEESSSCEE---EEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred EEECCccccc---cccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 9999865532 11123334479999999999999999999864
No 195
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.35 E-value=2.9e-12 Score=87.81 Aligned_cols=98 Identities=14% Similarity=0.149 Sum_probs=73.1
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCe-eEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPT-VKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
.+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+.... + .|.|.+++..|+|.|+|.+.|.
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~-------~--~L~i~~v~~~D~G~Y~C~a~n~ 76 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA-------S--SYFIDAATVDDSGEYRCQTQLS 76 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS-------S--EEEESSCCGGGCEEEEEEETTS
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc-------c--EEEEecccccCCEEEEEEeCCC
Confidence 356777777778899999999999999988776 99999998776532 2 7999999999999999999885
Q ss_pred CcceEEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 135 HGTDETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 135 ~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
. ....+.|.|...+.. ...+...+.+|+
T Consensus 77 ~--~s~~~~l~V~~~p~~---~~~~~~~v~~G~ 104 (204)
T 3sgj_C 77 T--LSDPVQLEVHIGWLL---LQAPRWVFKEED 104 (204)
T ss_dssp B--CCCCEEEEEECSSEE---EECSCSEEETTC
T ss_pred c--ccccEEEEEecCceE---ecCCceeEeCCC
Confidence 3 334556666654422 122334555554
No 196
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.35 E-value=6.7e-12 Score=95.06 Aligned_cols=92 Identities=15% Similarity=0.133 Sum_probs=64.9
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcce
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 138 (168)
.+...+.+..+.+|+++.|.|.+.|.|.|.+.|++++..+...............|.|.+++..|+|.|+|.|.|..|..
T Consensus 50 ~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~ 129 (423)
T 3qs7_E 50 GTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNY 129 (423)
T ss_dssp ------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEE
T ss_pred cceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcE
Confidence 34445557889999999999999999999999999987765422111112223469999999999999999999999998
Q ss_pred EEEEEEEEeeCC
Q psy12421 139 ETNCVVIVESEE 150 (168)
Q Consensus 139 ~~~~~l~v~~~p 150 (168)
...+.|.|..+|
T Consensus 130 ~~~~~l~V~~~p 141 (423)
T 3qs7_E 130 TILFTVSIRNTL 141 (423)
T ss_dssp EEEEEEEEC---
T ss_pred EEEEEEEEecCc
Confidence 888888887543
No 197
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.34 E-value=2.1e-12 Score=98.94 Aligned_cols=82 Identities=24% Similarity=0.551 Sum_probs=66.6
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC---CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEE
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK---RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET 140 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 140 (168)
+....+.+|+++.|.|.+.|.|.|.+.|++++..+.. ........++ +|.|.+++.+|+|.|+|.|.|..|....
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 469 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG--TLEVRYAQVQDNGTYLCIAANAGGNDSM 469 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTTS--CEEESSCCSTTCEEEEEEEEETTEEEEE
T ss_pred cccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCCC--EEEEeeCChHHCEEEEEEEEeCCCcEEE
Confidence 3567899999999999999999999999999876542 1111222344 6999999999999999999999999988
Q ss_pred EEEEEEe
Q psy12421 141 NCVVIVE 147 (168)
Q Consensus 141 ~~~l~v~ 147 (168)
.+.|.|.
T Consensus 470 ~~~l~V~ 476 (477)
T 2id5_A 470 PAHLHVR 476 (477)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8888875
No 198
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.34 E-value=4.5e-12 Score=94.06 Aligned_cols=93 Identities=25% Similarity=0.399 Sum_probs=72.9
Q ss_pred CCCeEEeecCCeEE---ecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-CeEEEecCCEEEEEEccCCC-CCCeEEEEE
Q psy12421 56 SAPNFTFLLRPRVM---QVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKP-EDSGEYKCV 130 (168)
Q Consensus 56 ~~p~~~~~~~~~~~---~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~ 130 (168)
.+|.|...+.+..+ .+|+.+.|.|.+.|.|.+.+.|++++..+... ...+...++ .|.|.++.. .|+|.|+|.
T Consensus 3 ~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~--~L~i~~~~~~~D~G~Y~C~ 80 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAG--DLVISNPVKAKDAGSYQCV 80 (382)
T ss_dssp EEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETT--EEEEESCCHHHHCEEEEEE
T ss_pred CCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCC--eEEEecccccccCEEEEEE
Confidence 36888888888776 68999999999999999999999999988642 222333455 789999986 999999999
Q ss_pred EEeCCcceEE-EEEEEEeeCC
Q psy12421 131 ATNKHGTDET-NCVVIVESEE 150 (168)
Q Consensus 131 a~n~~g~~~~-~~~l~v~~~p 150 (168)
+.|..|.... ...|.|...+
T Consensus 81 a~n~~g~~~s~~~~l~v~~~~ 101 (382)
T 1cs6_A 81 ATNARGTVVSREASLRFGFLQ 101 (382)
T ss_dssp EEETTEEEECCCEEEEEEEEC
T ss_pred EEcCCcEEEecceEEEeeccc
Confidence 9999887532 4566665544
No 199
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.34 E-value=1.6e-12 Score=90.04 Aligned_cols=126 Identities=12% Similarity=0.075 Sum_probs=80.7
Q ss_pred CceeEEEEeCCCCCCCCCCcccc----eeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQ----VRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKW 91 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W 91 (168)
.+.+.++...|.|. |.|.... ......+.+.+. ....+|.+...+ +..+.+|+.++|.|.+.+.|.+.+.|
T Consensus 65 ~L~I~~v~~~D~G~--Y~C~a~n~~~~~~~s~~~~l~V~--~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W 139 (218)
T 1uct_A 65 EFVIDHMDANKAGR--YQCQYRIGHYRFRYSDTLELVVT--GLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSL 139 (218)
T ss_dssp EEEECSCCGGGCEE--EEEEEEETTTEEEECCCEEEEEE--CSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEE
T ss_pred EEEEcccccccCEE--EEEEEEcCCCceeecCCEEEEEc--CcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEE
Confidence 56677788888666 4333221 111222333332 222456665544 56788999999999777788899999
Q ss_pred EeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCc-----ceEEEEEEEEeeC
Q psy12421 92 YKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG-----TDETNCVVIVESE 149 (168)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~~ 149 (168)
+|+|..+.... . .......|.|.+++.+|+|.|+|.|.|... ..+..+.|.|.+.
T Consensus 140 ~k~g~~~~~~~-~--~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 140 AKEGELSLPQH-Q--SGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp EETTCSSCCSE-E--ECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred EECCCcccccc-c--CCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 99997665421 1 122233799999999999999999998642 1234566777654
No 200
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.34 E-value=5.2e-12 Score=93.81 Aligned_cols=94 Identities=20% Similarity=0.327 Sum_probs=73.0
Q ss_pred CCCeEEeecCC-eEEecCCcEEEEEEEeccCCCeeEEEe-CCEECCC-CCeEEEecCCEEEEEEccCCCCC------CeE
Q psy12421 56 SAPNFTFLLRP-RVMQVRQTCKLLCCLSGKPPPTVKWYK-GNRELSK-RDYSMSYSDGVVSMEIIDCKPED------SGE 126 (168)
Q Consensus 56 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d------~G~ 126 (168)
.+|.|...+.+ ..+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.. ........++ .|.|.++...| +|.
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~~~~~d~G~ 79 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQV 79 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGGCCHHHHEEE
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCc--eEEecccChhhccccccCce
Confidence 46888888776 457789999999999999999999999 7776654 2233344555 79999999887 999
Q ss_pred EEEEEEeCCcce-EEEEEEEEeeCCC
Q psy12421 127 YKCVATNKHGTD-ETNCVVIVESEEE 151 (168)
Q Consensus 127 Y~C~a~n~~g~~-~~~~~l~v~~~p~ 151 (168)
|+|.|.|..|.. ...+.|.+..+|.
T Consensus 80 Y~C~a~n~~g~~~s~~~~v~v~~~p~ 105 (388)
T 2v5m_A 80 YACLARNQFGSIISRDVHVRAVVAQY 105 (388)
T ss_dssp EEEEEEETTEEEECCCEEEEEECCCC
T ss_pred EEEEEEccCCeEEecceEEEEccccc
Confidence 999999999874 3456666665543
No 201
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.34 E-value=1.1e-11 Score=85.25 Aligned_cols=84 Identities=15% Similarity=0.221 Sum_probs=63.0
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEe-ccCCCeeEEEeCCEECCC-CCeEEEecC--CEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLS-GKPPPTVKWYKGNRELSK-RDYSMSYSD--GVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~~~~~~~~-~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
|.|.. ..+..+.+|+.+.|.|.+. +.|.|.+.|++++..+.. .++.+.... +..+|.|.++..+|+|.|+|.|.|
T Consensus 4 p~~~~-~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 4 PFTKS-ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp --CCE-EEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred Ceeec-CCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 55543 3357788999999999986 479999999999998865 344444333 666799999999999999999999
Q ss_pred CCcceEEEEEE
Q psy12421 134 KHGTDETNCVV 144 (168)
Q Consensus 134 ~~g~~~~~~~l 144 (168)
|.......+
T Consensus 83 --g~a~~~~~~ 91 (207)
T 3rbs_A 83 --GKATNHSTV 91 (207)
T ss_dssp --TTEEEEEEE
T ss_pred --CCeEEEEEE
Confidence 554444443
No 202
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.34 E-value=4.3e-12 Score=91.65 Aligned_cols=91 Identities=22% Similarity=0.446 Sum_probs=70.7
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCCEECCCCC-eEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGNRELSKRD-YSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
..+|.|.... +..+.+|+.+.|.|.+.+. |.+.+.|++++..+.... +.+ ..+...|.|.+++..|+|.|+|.+.
T Consensus 5 ~~~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~ 81 (317)
T 2y25_A 5 FTGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEFSKKDAGIYEVILK 81 (317)
T ss_dssp SSCCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEEEE
T ss_pred cCCCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEE--ECCeEEEEEccCCcccCeEEEEEEE
Confidence 3578887444 5889999999999999887 789999999999886432 222 2444589999999999999999999
Q ss_pred eCCcceEEEEEEEEee
Q psy12421 133 NKHGTDETNCVVIVES 148 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~ 148 (168)
|..|.....+.|.|..
T Consensus 82 n~~g~~~~~~~l~v~~ 97 (317)
T 2y25_A 82 DDRGKDKSRLKLVDEA 97 (317)
T ss_dssp SSSCEEEEEECCSTHH
T ss_pred CCCCcEEEEEEEEEec
Confidence 9999877666665543
No 203
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.34 E-value=7.4e-12 Score=98.93 Aligned_cols=138 Identities=14% Similarity=0.125 Sum_probs=87.7
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCcc-eeeEeeecccCCC-eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREPL-QITFWQETVESAP-NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWY 92 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p-~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~ 92 (168)
..+.+.++...|.+. |.|. +.+.... ........+..+| .+...+....+..|+.+.|.|.+.|.|.|.+.|+
T Consensus 342 ~~L~i~~~~~~d~G~--Y~C~---a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~ 416 (642)
T 1e07_A 342 RTLTLLSVTRNDVGP--YECG---IQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWL 416 (642)
T ss_pred CEEEEeccCcccCee--EEEE---EeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEE
Confidence 346666777777555 4322 2222111 1111111222333 2344556678889999999999999999999999
Q ss_pred eCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEE--EEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 93 KGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN--CVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
+++..+... . .|.|.++...|+|.|+|.|.|..|....+ +.+.|...+..+.....+...+.+|+
T Consensus 417 ~~g~~~~~~--------~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~ 483 (642)
T 1e07_A 417 IDGNIQQHT--------Q--ELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKD 483 (642)
T ss_pred ECCEEcCCC--------c--eEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCC
Confidence 999876532 1 68999999999999999999999876554 44555544333332223334455554
No 204
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.34 E-value=5.1e-12 Score=92.34 Aligned_cols=84 Identities=13% Similarity=0.151 Sum_probs=65.9
Q ss_pred ecCCeEEecCCcEEEEEEEeccC---CC-eeEEEeCCEEC-CCCCeEEEe---cC--CEEEEEEccCCCCCCe-EEEEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP---PP-TVKWYKGNREL-SKRDYSMSY---SD--GVVSMEIIDCKPEDSG-EYKCVA 131 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p---~p-~i~W~~~~~~~-~~~~~~~~~---~~--~~~~l~i~~~~~~d~G-~Y~C~a 131 (168)
.+....+.+|+.+.|.|.+.|.| .| .+.|++++..+ ......... .. ....|.|.++...|+| .|+|.|
T Consensus 234 ~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a 313 (329)
T 3oq3_B 234 LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRG 313 (329)
T ss_dssp CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEE
T ss_pred cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEE
Confidence 55667889999999999999998 77 88999998864 222211111 11 2347999999999999 999999
Q ss_pred EeCCcceEEEEEEEE
Q psy12421 132 TNKHGTDETNCVVIV 146 (168)
Q Consensus 132 ~n~~g~~~~~~~l~v 146 (168)
.|..|.....+.|.|
T Consensus 314 ~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 314 HNYYFDKTLTTTVVL 328 (329)
T ss_dssp ECSSCEEEEEEEEEE
T ss_pred EecCCceEEEEEEEe
Confidence 999999988888776
No 205
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.34 E-value=2.2e-12 Score=93.30 Aligned_cols=118 Identities=18% Similarity=0.276 Sum_probs=78.2
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeec---CCeEEecCCcEEEEEEE------eccC
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLL---RPRVMQVRQTCKLLCCL------SGKP 85 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~g~~~~l~C~~------~g~p 85 (168)
..|.+.++...|.|.+.+ ........ ....+.......+|.+...+ ....+..|+.+.|.|.+ .|.|
T Consensus 62 ~~L~i~~v~~~D~G~Y~C--~a~n~~g~--~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p 137 (315)
T 1itb_B 62 EKLWFVPAKVEDSGHYYC--VVRNSSYC--LRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNE 137 (315)
T ss_dssp SBEECTTCCGGGCSCCEE--CCCSSSCC--CCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTC
T ss_pred CeEEECCCChhhCEEEEE--EEeCCceE--EEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCC
Confidence 356777888888766433 32211111 11111111122344432222 13567889999999998 8899
Q ss_pred CCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEE-eCCcce
Q psy12421 86 PPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT-NKHGTD 138 (168)
Q Consensus 86 ~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~-n~~g~~ 138 (168)
.|.+.|++++..+..........++ .|.|.++...|+|.|+|.|. |..|..
T Consensus 138 ~~~i~W~k~~~~l~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 138 LPKLQWYKDCKPLLLDNIHFSGVKD--RLIVMNVAEKHRGNYTCHASYTYLGKQ 189 (315)
T ss_dssp CCCCEEEETTEECCCCSSSEEEETT--EEEESSCCGGGCEEEEEEEEEEETTEE
T ss_pred CCEEEEEECCEECCCccceEeecCc--eEEEEeceehhCcEEEEEEEcCCCCcE
Confidence 9999999999988654333444455 79999999999999999999 788876
No 206
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.34 E-value=3.7e-12 Score=89.93 Aligned_cols=95 Identities=14% Similarity=0.180 Sum_probs=68.2
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EECC-------------CCCeEEEecCCEEEEEEccCCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--RELS-------------KRDYSMSYSDGVVSMEIIDCKP 121 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~~-------------~~~~~~~~~~~~~~l~i~~~~~ 121 (168)
+|.+...+....+.+|+++.|.|.+.+.|.+.+.|+++. ..+. ..++.........+|.|.+++.
T Consensus 138 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 217 (256)
T 3umt_A 138 DIQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLES 217 (256)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCG
T ss_pred ccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCCh
Confidence 677777787889999999999999999999999999842 1111 1334444445556799999999
Q ss_pred CCCeEEEEEEEeCCcceEE-EEEEEEeeCCC
Q psy12421 122 EDSGEYKCVATNKHGTDET-NCVVIVESEEE 151 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p~ 151 (168)
+|+|.|.|.+.|..+.... ...|.|.+.+.
T Consensus 218 ~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~~ 248 (256)
T 3umt_A 218 EDFVDYYCLQYASSPPTFGGGTKLEIKRAAA 248 (256)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEEC----
T ss_pred hHCEEEEEEEeeCCCcEECCCEEEEEECCCc
Confidence 9999999999986544322 45677765443
No 207
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.33 E-value=7.8e-12 Score=85.61 Aligned_cols=91 Identities=20% Similarity=0.184 Sum_probs=67.4
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EEC-------------CCCCeEEEecCCEEEEEEccCCCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSMEIIDCKPE 122 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~-------------~~~~~~~~~~~~~~~l~i~~~~~~ 122 (168)
|.+...+....+.+|+++.|.|.+.+.|.+.+.|+++. ..+ ...++......+..+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 45566677788999999999999999999999999842 111 023444444556668999999999
Q ss_pred CCeEEEEEEEeCCcc---eEEEEEEEEee
Q psy12421 123 DSGEYKCVATNKHGT---DETNCVVIVES 148 (168)
Q Consensus 123 d~G~Y~C~a~n~~g~---~~~~~~l~v~~ 148 (168)
|+|.|.|.+.|..+. ......|.|..
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 110 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKG 110 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEEC
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeC
Confidence 999999999998763 23344555543
No 208
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.33 E-value=2.5e-12 Score=90.68 Aligned_cols=98 Identities=16% Similarity=0.174 Sum_probs=67.6
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCC----eeEEEeCC--EECC-------------CCCeEEEecCCEEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP----TVKWYKGN--RELS-------------KRDYSMSYSDGVVSMEI 116 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p----~i~W~~~~--~~~~-------------~~~~~~~~~~~~~~l~i 116 (168)
.+|.+...+....+.+|+++.|.|.+.+.+.+ .+.|+++. ..+. ..++..........|.|
T Consensus 132 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 211 (253)
T 3uzq_A 132 SELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTI 211 (253)
T ss_dssp --CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEE
Confidence 35777777878899999999999999998876 89999842 2111 12333333445567999
Q ss_pred ccCCCCCCeEEEEEEEeCCcceEE-EEEEEEeeCCCch
Q psy12421 117 IDCKPEDSGEYKCVATNKHGTDET-NCVVIVESEEESK 153 (168)
Q Consensus 117 ~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p~~~ 153 (168)
.+++.+|+|.|.|.+.|..+.... ...|.|...+..+
T Consensus 212 ~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~~~~ 249 (253)
T 3uzq_A 212 NPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPLEHH 249 (253)
T ss_dssp SSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC----
T ss_pred CCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCCCCc
Confidence 999999999999999986544322 4456666554443
No 209
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.33 E-value=3.1e-11 Score=83.05 Aligned_cols=83 Identities=14% Similarity=0.205 Sum_probs=67.6
Q ss_pred eEEecCCcEEEEEEEeccCCC--eeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 67 RVMQVRQTCKLLCCLSGKPPP--TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
..+..|+++.|.|.+ +.|.| .++|++.+..+ .... ...+...|.|.+++.+|+|.|.|.+.|..|.....+.|
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l--~~~~--~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~l 91 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL--GAVQ--SDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQL 91 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT--CCEE--EESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc--CcEE--ecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEE
Confidence 588899999999999 98888 99999865333 2211 23444579999999999999999999999888889999
Q ss_pred EEeeCCCchh
Q psy12421 145 IVESEEESKE 154 (168)
Q Consensus 145 ~v~~~p~~~~ 154 (168)
.|..+|..+.
T Consensus 92 tV~~~P~~~~ 101 (210)
T 1gsm_A 92 LVYAFPNQLT 101 (210)
T ss_dssp EEEBCCSEEE
T ss_pred EEEecCCCcE
Confidence 9998886555
No 210
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.32 E-value=9e-12 Score=97.33 Aligned_cols=144 Identities=17% Similarity=0.171 Sum_probs=95.6
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcce----eeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCee--
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQ----ITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTV-- 89 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i-- 89 (168)
.+.+.++...|.+. |.|. +.+..... .......+..+|.+...+....+.+|+.+.|.|.+.+.|.|.+
T Consensus 291 ~L~i~~v~~~d~G~--Y~C~---a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~ 365 (585)
T 2ocw_A 291 SVVITGLRKEDAGR--YLCG---AHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKY 365 (585)
T ss_pred EEEEccCChhhCEE--EEEE---EEcCCCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEE
Confidence 46677777788665 4332 22211111 1223334556778877777888999999999999999999987
Q ss_pred --EEEe--CCE--ECCC----------CCeEEEe--cCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 90 --KWYK--GNR--ELSK----------RDYSMSY--SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 90 --~W~~--~~~--~~~~----------~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
.|++ ++. .+.. .++.+.. .++..+|.|.++...|+|.|+|.| |..|.....+.|.|...+.
T Consensus 366 w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p 444 (585)
T 2ocw_A 366 WCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEP 444 (585)
T ss_pred EEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCcc
Confidence 7999 776 3321 1222221 234446999999999999999999 9999888888888876533
Q ss_pred chhhhhhhhhcccCCC
Q psy12421 152 SKEQQELAHNFLYSGE 167 (168)
Q Consensus 152 ~~~~~~~~~~~~~~g~ 167 (168)
.... .....+.+|+
T Consensus 445 ~~~~--~~~~~v~~G~ 458 (585)
T 2ocw_A 445 NLKV--PGNVTAVLGE 458 (585)
T ss_pred cccc--CCceeEecCC
Confidence 3222 2333455554
No 211
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.31 E-value=1.6e-12 Score=99.06 Aligned_cols=96 Identities=24% Similarity=0.342 Sum_probs=70.9
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC-EECCCC---CeEEEecCCEEEEEEccCCCCCCeEEEEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN-RELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCV 130 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~-~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 130 (168)
+.+|.+...+.+..+.+|+++.|.|.+. |.|.+.|++++ ..+... .......++ +|.|.+++.+|+|.|+|.
T Consensus 350 C~~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g--~L~i~~v~~~D~G~Y~C~ 425 (452)
T 3zyi_A 350 CSAPFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDG--TLNFSHVLLSDTGVYTCM 425 (452)
T ss_dssp CCCCCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTTS--CEECSSCCTTCCEEEEEE
T ss_pred ccCcccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCCC--eEEEeecCHHHCEEEEEE
Confidence 3567777777888999999999999987 99999999954 333221 112223445 699999999999999999
Q ss_pred EEeCCcceEEEEEEEEeeCCCchh
Q psy12421 131 ATNKHGTDETNCVVIVESEEESKE 154 (168)
Q Consensus 131 a~n~~g~~~~~~~l~v~~~p~~~~ 154 (168)
|.|..|....++.|.|.+.+.++.
T Consensus 426 a~N~~G~~~~~~~l~v~~~~~~~~ 449 (452)
T 3zyi_A 426 VTNVAGNSNASAYLNVSTAGTHHH 449 (452)
T ss_dssp EECSSCEEEEEEEEEC--------
T ss_pred EEcCCCcEEEEEEEEEEcccccCC
Confidence 999999999999999987665543
No 212
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.31 E-value=7.6e-12 Score=96.65 Aligned_cols=95 Identities=19% Similarity=0.242 Sum_probs=67.5
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-eeEEEeCCEECCCCCe-EEEecCC----EEEEEEccCCCCCCeEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-TVKWYKGNRELSKRDY-SMSYSDG----VVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~W~~~~~~~~~~~~-~~~~~~~----~~~l~i~~~~~~d~G~Y 127 (168)
..+|.+........+.+|+.+.|.|.+.|. |.| .+.|++++..+..... .....++ ...|.|.++...| |.|
T Consensus 217 ~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y 295 (523)
T 2rcj_C 217 TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY 295 (523)
T ss_pred CcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceE
Confidence 456666544444556789999999999886 878 8999999976532111 1111222 2379999999999 999
Q ss_pred EEEEEeCCcceEEEEEEEEeeCC
Q psy12421 128 KCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 128 ~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
+|.|.|..|.......|.+...|
T Consensus 296 ~C~a~n~~g~~~~~~~l~v~~~P 318 (523)
T 2rcj_C 296 ICNVNHKPSNTKVDKRVEPLSLP 318 (523)
T ss_pred EEEEEeCCCCcceEEecCCCcCc
Confidence 99999999987766666654443
No 213
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.31 E-value=1.5e-12 Score=87.66 Aligned_cols=113 Identities=14% Similarity=0.075 Sum_probs=72.2
Q ss_pred CCceeEEEEeCCCCCCCCCCcccce----eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQV----RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVK 90 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 90 (168)
..+.+.++...|.|. |.|..... .....+.+.+ .....+|.+...+ +..+.+|+.+.|.|.+.+. ++.+.
T Consensus 52 ~~L~i~~v~~~D~G~--Y~C~a~n~~g~~~~s~~~~l~V--~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~-~~~~~ 125 (184)
T 2gi7_A 52 AVLFIPAMKRSLAGR--YRCSYQNGSLWSLPSDQLELVA--TGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYG-FDQFA 125 (184)
T ss_dssp SEEEESSCCGGGCEE--EEEEEEETTEEBCCCCCEEEEE--ESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSC-CCEEE
T ss_pred cEEEECcCChhhCce--EEEEEEcCCCccCCCCCEEEEe--cCcCCCCEEEeCC-CceecCCCcEEEEEEcCCC-CcEEE
Confidence 345666778888666 43332110 1112222322 2223456776555 4567789999999998664 47999
Q ss_pred EEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCc
Q psy12421 91 WYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 91 W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 136 (168)
|+|++..+....... .....|.|.+++.+|+|.|+|.|.|..+
T Consensus 126 w~k~g~~~~~~~~~~---~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 126 LYKEGDPAPYKNPER---WYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EEECCCCTTSCCCCE---EEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred EEECCCcCcceecCC---CceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 999998765422111 1122588999999999999999999864
No 214
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.31 E-value=6.8e-13 Score=88.95 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=51.8
Q ss_pred CCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEE
Q psy12421 72 RQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146 (168)
Q Consensus 72 g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 146 (168)
+..+.|.|.+.|.|.|.+.|++++..+.... .+.|..+...|+|.|+|.|.|..|.......|.+
T Consensus 110 ~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~----------~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 110 CSNATLTCEVLEGTDVELKLYQGKEHLRSLR----------QKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp TTTTEEEEECSSCSSCEEEEEETTEEEEEES----------SSEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred CCcEEEEEEecCCCCcEEEEEECCEECCCCC----------cEEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 4569999999999999999999998764321 1334466789999999999999999887766543
No 215
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.31 E-value=3e-12 Score=87.77 Aligned_cols=73 Identities=16% Similarity=0.323 Sum_probs=57.3
Q ss_pred ecCCcEEEEEEEeccCCCeeEEEeCCEECCCC--CeEEEecCCEEEEEEccC-CCCCCeEEEEEEEeCCcce-EEEEEEE
Q psy12421 70 QVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR--DYSMSYSDGVVSMEIIDC-KPEDSGEYKCVATNKHGTD-ETNCVVI 145 (168)
Q Consensus 70 ~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~--~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~a~n~~g~~-~~~~~l~ 145 (168)
.+|+++.|.|. |.|.|.+.|++++..+... ...+...++ .|.|.++ ..+|+|.|+|.|.|..|.. ...+.|.
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~--~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~ 201 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDED--HLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLR 201 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEETT--EEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEE
T ss_pred ecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCCC--EEEEeeCCccccCEEEEEEeccCCCCceeEEEEEE
Confidence 38999999998 8899999999999887542 122222345 7999999 9999999999999999963 4455555
Q ss_pred E
Q psy12421 146 V 146 (168)
Q Consensus 146 v 146 (168)
+
T Consensus 202 ~ 202 (204)
T 1sy6_A 202 A 202 (204)
T ss_dssp E
T ss_pred E
Confidence 4
No 216
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.31 E-value=6.8e-12 Score=85.51 Aligned_cols=110 Identities=11% Similarity=0.091 Sum_probs=72.8
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCe--EEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDY--SMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
.+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|+|++..+..... ..........|.|.+++..|+|.|.|.+.|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 4677776665 67889999999999874 7889999999865432110 001111233799999999999999999987
Q ss_pred CCc-----ceEEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 134 KHG-----TDETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 134 ~~g-----~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
... .....+.|.|...+..+.....+...+.+|+
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~ 123 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGE 123 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTC
T ss_pred CCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCC
Confidence 531 2234566777665433333333444667775
No 217
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.30 E-value=2.6e-12 Score=97.40 Aligned_cols=116 Identities=16% Similarity=0.066 Sum_probs=80.0
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCc----ceeeEeeecccCCCeEEeec--CCeEEecCCcEEEEEEEeccCCCee
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREP----LQITFWQETVESAPNFTFLL--RPRVMQVRQTCKLLCCLSGKPPPTV 89 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~i 89 (168)
.+.+.++...|.+. |. +...+... .........+..+|.+.... ....+.+|+.+.|.|.+.|.|.|.+
T Consensus 328 ~L~i~~~~~~d~G~--Y~---C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i 402 (450)
T 1z7z_I 328 QLLLKATPEDNGRS--FS---CSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPEL 402 (450)
T ss_dssp CEEEECCGGGTTCE--EE---EEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEE
T ss_pred EEEEecCcccCCce--EE---EEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcE
Confidence 46666677777554 42 23322111 11122233445667766543 4568899999999999999999999
Q ss_pred EEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 90 KWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 90 ~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
.|++++..+.. .+. .+ .+...|+|.|+|.|.|..|.....+.|.|.+
T Consensus 403 ~W~~~g~~~~~-------~g~--~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 403 KCLKDGTFPLP-------IGE--SV---TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp EEEETTTEECC-------TTS--CE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEECCcccCC-------CCC--eE---eEehhhCeEEEEEEEeCCCceeEEEEEEEEc
Confidence 99999863222 111 12 5778999999999999999999999998875
No 218
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.30 E-value=1e-11 Score=82.80 Aligned_cols=82 Identities=18% Similarity=0.243 Sum_probs=65.8
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCe-eEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPT-VKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
.+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+.. ..+ .|.|.+++..|+|.|.|.+.|.
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-------~~~--~L~i~~~~~~d~G~Y~C~~~n~ 76 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS-------QAS--SYFIDAATVNDSGEYRCQTNLS 76 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES-------SCS--EEEESSCCGGGCEEEEEECSSS
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC-------Cce--EEEEeCCCcccCEEEEEEeeCC
Confidence 467888888888999999999999999988776 789999876643 223 7999999999999999999986
Q ss_pred CcceEEEEEEEEee
Q psy12421 135 HGTDETNCVVIVES 148 (168)
Q Consensus 135 ~g~~~~~~~l~v~~ 148 (168)
.+.. ...|.|..
T Consensus 77 ~~s~--~~~l~V~~ 88 (175)
T 1fnl_A 77 TLSD--PVQLEVHI 88 (175)
T ss_dssp CCCC--CEEEEEEC
T ss_pred cccc--cEEEEEeC
Confidence 6543 45555553
No 219
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.29 E-value=3.9e-11 Score=81.44 Aligned_cols=125 Identities=14% Similarity=0.219 Sum_probs=74.5
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccceeccCc-----ceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEe-ccCCC
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQVRRREP-----LQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLS-GKPPP 87 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p 87 (168)
...|.+.+++..|.|. |.|.......... ..+.+........|.+.... ...|+.+.|.|.+. |.|.|
T Consensus 64 ~~~L~I~~v~~~D~G~--Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~----~~~g~~~~l~C~~~~g~P~p 137 (201)
T 1dr9_A 64 NLSIVILALRPSDEGT--YECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFE----IPTSNIRRIICSTSGGFPEP 137 (201)
T ss_dssp TTEEEECSCCGGGCEE--EEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEE----CSSTTEEEEEEEEEEESSCE
T ss_pred CcEEEEecccchhCeE--EEEEEEcCCCCccccccccEEEEEEcCCCCCCceEecc----CCCCCeEEEEEecCCccCCC
Confidence 3467788888888666 5333222111111 11111111112235544321 23488999999995 89999
Q ss_pred eeEEEeCCEECCCCCeEEEec-C-CE-EEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 88 TVKWYKGNRELSKRDYSMSYS-D-GV-VSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 88 ~i~W~~~~~~~~~~~~~~~~~-~-~~-~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
.+.|++++..+.......... . +. ....+..+...|.|.|+|.|.|..|.....+.+
T Consensus 138 ~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 138 HLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred EEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 999999998876543222222 2 21 122334556689999999999999987766643
No 220
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.29 E-value=1.1e-12 Score=92.85 Aligned_cols=91 Identities=21% Similarity=0.187 Sum_probs=63.2
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCCCeeEEEe--CCEECC-------------CCCeEEEecCCEEEEEEccCCCCCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK--GNRELS-------------KRDYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~--~~~~~~-------------~~~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
+...+....+.+|+++.|.|.+.+.|.+.+.|++ ++..+. ..++..........|.|.++..+|+
T Consensus 142 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 221 (257)
T 1f3r_B 142 LTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDV 221 (257)
T ss_dssp SCEETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGC
T ss_pred EEccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhC
Confidence 3444555678899999999999999989999999 444321 1234333334455799999999999
Q ss_pred eEEEEEEEeCCcceEEEEEEEEeeCC
Q psy12421 125 GEYKCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
|.|.|.|.|..........|.|...+
T Consensus 222 G~Y~C~a~n~~~~~g~gt~l~V~~~~ 247 (257)
T 1f3r_B 222 ATYFCYQYNNGYTFGAGTKLELKAAE 247 (257)
T ss_dssp SEEEEEEESSSEEECCCCEECCSSSC
T ss_pred EEEEEEEeCCCCeECCCEEEEEeCCC
Confidence 99999999975111123355555443
No 221
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.29 E-value=1.1e-11 Score=87.68 Aligned_cols=131 Identities=14% Similarity=0.056 Sum_probs=81.4
Q ss_pred CceeEEEEeCCCCCCCCCCcccceecc--CcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCC-----e
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRR--EPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP-----T 88 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-----~ 88 (168)
.|.+.+++..|.+. |.|........ ...........+..+|.+...+....+.+|++++|.|.+.+.|.+ .
T Consensus 80 ~L~I~~v~~~DsG~--Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~ 157 (256)
T 1nqb_A 80 YMQLSSLTSEDSAV--YYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTY 157 (256)
T ss_dssp EEEECSCCGGGCEE--EEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBC
T ss_pred EEEECcCChhhCEE--EEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceE
Confidence 46677788888666 43222211000 000000111233455677777777889999999999999998875 9
Q ss_pred eEEEe--CCEECC-------------CCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcce-EEEEEEEEee
Q psy12421 89 VKWYK--GNRELS-------------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD-ETNCVVIVES 148 (168)
Q Consensus 89 i~W~~--~~~~~~-------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 148 (168)
+.|++ ++..+. ..++..........|.|.+++.+|+|.|.|.+.|..+.. .....|.|..
T Consensus 158 v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 158 LEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp EEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 99999 444221 123433334455579999999999999999999854332 2233566653
No 222
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.29 E-value=4.4e-12 Score=87.69 Aligned_cols=117 Identities=14% Similarity=0.195 Sum_probs=73.6
Q ss_pred CCCceeEEEEeCCCCCCCCCCccccee---ccCcceeeEeeecccCCCeEEeecCCeEEecCCcE-EEEEEE-eccCCCe
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQVR---RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTC-KLLCCL-SGKPPPT 88 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~-~l~C~~-~g~p~p~ 88 (168)
...+.+.+++..|.|. |.|...... ......+.+. .....|.+...+....+..|+.+ .|.|.+ .+.|.|.
T Consensus 76 ~~~L~i~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~l~V~--~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~ 151 (231)
T 2pet_A 76 QGRLVLAEAQVGDERD--YVCVVRAGAAGTAEATARLNVF--AKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPK 151 (231)
T ss_dssp TCCEEESSCCGGGCEE--EEEEEECGGGCEEEEEEEEEEE--BCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCE
T ss_pred CceEEEcccCcccCce--EEEEEEecCCCceEEEEEEEEE--ecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCE
Confidence 3447788888888766 433322111 1111122222 11223666666666667788887 999999 8999999
Q ss_pred eEEEeCCEECCCCC-----eEEEe-----cCC----EEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 89 VKWYKGNRELSKRD-----YSMSY-----SDG----VVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 89 i~W~~~~~~~~~~~-----~~~~~-----~~~----~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
+.|++++..+.... ..+.. ..+ ...|.|......|.|.|+|.|.|.
T Consensus 152 i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 152 ITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred EEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 99999999886533 22211 111 135777755556699999999994
No 223
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.29 E-value=3.6e-11 Score=74.09 Aligned_cols=76 Identities=24% Similarity=0.274 Sum_probs=58.1
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-----EC----------CCCCeEEEecCCEEEEEEccCCCCCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-----EL----------SKRDYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-----~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
+...+....+.+|+++.|.|.+.+.|.+.+.|+++.. .+ ...++.+....+...|.|.+++.+|+
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 83 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDF 83 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCC
T ss_pred eeccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHC
Confidence 4455667789999999999999999899999998531 11 01344444344556899999999999
Q ss_pred eEEEEEEEeCC
Q psy12421 125 GEYKCVATNKH 135 (168)
Q Consensus 125 G~Y~C~a~n~~ 135 (168)
|.|.|.+.|..
T Consensus 84 G~Y~C~~~n~~ 94 (108)
T 1jhl_L 84 AMYICQQHNEY 94 (108)
T ss_dssp SEEEEEECSSS
T ss_pred EEEEEEEccCC
Confidence 99999999863
No 224
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.28 E-value=8.3e-12 Score=94.62 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=62.4
Q ss_pred CCCeEE-eecCCeEEecCCcEEEEEEEeccCCC---eeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEE
Q psy12421 56 SAPNFT-FLLRPRVMQVRQTCKLLCCLSGKPPP---TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 56 ~~p~~~-~~~~~~~~~~g~~~~l~C~~~g~p~p---~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
.+|.+. ..+.+..+.+|+.+.|.|.+.|.|+| .+.|++++..+...... .......|.|.++...|+|.|+|.|
T Consensus 84 ~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a 161 (450)
T 1z7z_I 84 WTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV--GEPAEVTTTVLVRRDHHGANFSCRT 161 (450)
T ss_dssp BCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECC--TTTEEEEEEEECCSSCSSCEEEEEE
T ss_pred eCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccccc--ccccceEEEEEeeccccCceEEEEE
Confidence 355554 56666889999999999999998888 99999999877532111 1222347999999999999999999
Q ss_pred EeCCcc
Q psy12421 132 TNKHGT 137 (168)
Q Consensus 132 ~n~~g~ 137 (168)
.|..|.
T Consensus 162 ~n~~g~ 167 (450)
T 1z7z_I 162 ELDLRP 167 (450)
T ss_dssp EEECGG
T ss_pred EcccCC
Confidence 999775
No 225
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.28 E-value=2.2e-10 Score=73.58 Aligned_cols=88 Identities=20% Similarity=0.325 Sum_probs=64.0
Q ss_pred ecCCeEEecCCcEEEEEEEeccCC---CeeEEEeCCEE--C---C-------------CCCeEEEe---cCCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPP---PTVKWYKGNRE--L---S-------------KRDYSMSY---SDGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~---p~i~W~~~~~~--~---~-------------~~~~~~~~---~~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+. +.+.|++++.. + . ..+..+.. ..+..+|.|.+
T Consensus 12 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~ 91 (139)
T 1pko_A 12 PGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQN 91 (139)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEcc
Confidence 444678889999999999886543 68999997631 1 0 12222221 12356899999
Q ss_pred CCCCCCeEEEEEEEeCCcceEEEEEEEEeeCC
Q psy12421 119 CKPEDSGEYKCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
++.+|+|.|.|.+.|..|.....+.|.|..++
T Consensus 92 v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~P~ 123 (139)
T 1pko_A 92 VRFSDEGGYTCFFRDHSYQEEAAVELKVEDPF 123 (139)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECTT
T ss_pred CCHHHCEEEEEEEEcCCCceEEEEEEEEecCc
Confidence 99999999999999998888888888887543
No 226
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.28 E-value=5.9e-12 Score=89.07 Aligned_cols=87 Identities=20% Similarity=0.302 Sum_probs=62.5
Q ss_pred cCCeEEecCCcEEEEEEE---eccCCCeeEEEeCCE-ECCC------------------CCe--EEEe----cCCEEEEE
Q psy12421 64 LRPRVMQVRQTCKLLCCL---SGKPPPTVKWYKGNR-ELSK------------------RDY--SMSY----SDGVVSME 115 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~---~g~p~p~i~W~~~~~-~~~~------------------~~~--~~~~----~~~~~~l~ 115 (168)
+....+.+|+.+.|.|.+ .+.|.|.+.|++++. .... .++ .+.. ......|.
T Consensus 125 p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 204 (268)
T 3mj6_A 125 PRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIK 204 (268)
T ss_dssp CSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEE
T ss_pred CCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEE
Confidence 335678899999999998 577999999998422 1110 000 0000 01223799
Q ss_pred EccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCC
Q psy12421 116 IIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
|.++...|+|.|+|.|.|..|.....+.|.|...+
T Consensus 205 i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 239 (268)
T 3mj6_A 205 LQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDE 239 (268)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-
T ss_pred ECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCC
Confidence 99999999999999999999998888888885443
No 227
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.27 E-value=5.2e-13 Score=98.03 Aligned_cols=92 Identities=14% Similarity=0.169 Sum_probs=42.1
Q ss_pred CCeEEeecCCe--EEecCCcEEEEEEEe----ccCCCeeEEEeCCEECCC--CCeEEE-----e-cCC---EEEEEEccC
Q psy12421 57 APNFTFLLRPR--VMQVRQTCKLLCCLS----GKPPPTVKWYKGNRELSK--RDYSMS-----Y-SDG---VVSMEIIDC 119 (168)
Q Consensus 57 ~p~~~~~~~~~--~~~~g~~~~l~C~~~----g~p~p~i~W~~~~~~~~~--~~~~~~-----~-~~~---~~~l~i~~~ 119 (168)
+|.+....... .+.+|+.+.|.|.+. |.|.|.+.|++++..+.. .+..+. . ..+ ...|.|.++
T Consensus 224 ~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 303 (349)
T 4dep_C 224 PPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKV 303 (349)
T ss_dssp SCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-----
T ss_pred CCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeec
Confidence 67776554433 788899999999998 578999999999987654 111110 0 011 224899999
Q ss_pred CCCCC-eEEEEEEEeCCcceEEEEEEEEee
Q psy12421 120 KPEDS-GEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 120 ~~~d~-G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
...|+ |.|+|.|.|..|.....+.|.|..
T Consensus 304 ~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 304 TSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp --------CEEEEECSSCEEEEECC-----
T ss_pred cHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 99999 999999999999999999888865
No 228
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.27 E-value=1.6e-11 Score=86.36 Aligned_cols=129 Identities=10% Similarity=0.090 Sum_probs=80.4
Q ss_pred CCceeEEEEeCCCCCCCCCCcccce----eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQV----RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVK 90 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 90 (168)
..+.+.++...|.|. |.|..... ....++.+.+. ....+|.+...+ +..+.+|++++|.|.+.+. .+.+.
T Consensus 60 ~~L~I~~v~~~DsG~--Y~C~~~~~~~~s~~S~~~~L~V~--~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~ 133 (242)
T 1p6f_A 60 VKFYIPDMNSRMAGQ--YSCIYRVGELWSEPSNLLDLVVT--EMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFL 133 (242)
T ss_dssp EEEEECSCCGGGCEE--EEEEEEETTEECCCCCCEEEEEE--CCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEE
T ss_pred eEEEecCCCcccCeE--EEEEEecCCccccCCcceEEEee--cccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEE
Confidence 345566788888666 44433110 11222333332 222367776555 4568899999999998764 56999
Q ss_pred EEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC--c-ceEEEEEEEEeeCCCc
Q psy12421 91 WYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH--G-TDETNCVVIVESEEES 152 (168)
Q Consensus 91 W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~--g-~~~~~~~l~v~~~p~~ 152 (168)
|+|++..+.. ..........|.|.+++..|+|.|.|.+.|.. . ..+..+.|.|.+.+..
T Consensus 134 w~k~g~~~~~---~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~ 195 (242)
T 1p6f_A 134 LLKEGRSSHV---QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIEN 195 (242)
T ss_dssp EEECSSSCEE---EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC----
T ss_pred EEECCCccCc---cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCC
Confidence 9999865542 11123344479999999999999999999864 1 2344667777765443
No 229
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.27 E-value=3e-11 Score=82.68 Aligned_cols=89 Identities=18% Similarity=0.196 Sum_probs=65.7
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE--EC----------C---CCCeEEEecCCEEEEEEccCCCCCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR--EL----------S---KRDYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~--~~----------~---~~~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
+...+....+.+|+++.|.|.+.+.|.+.+.|++++. .+ . ..++......+...|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 3445667789999999999999999999999998531 11 0 1344444455566899999999999
Q ss_pred eEEEEEEEeCCcceEE-EEEEEEee
Q psy12421 125 GEYKCVATNKHGTDET-NCVVIVES 148 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~-~~~l~v~~ 148 (168)
|.|.|.+.|..|.... ...|.|..
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKR 108 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEeeecCCcceeCCCEEEEEec
Confidence 9999999998775332 33566654
No 230
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.27 E-value=1.6e-11 Score=87.61 Aligned_cols=128 Identities=14% Similarity=0.100 Sum_probs=83.1
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCe-EEeecCCeEEecCCcEEEEEEEeccCCCe-eEE
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPN-FTFLLRPRVMQVRQTCKLLCCLSGKPPPT-VKW 91 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W 91 (168)
...+.+.++...|.|. |.|... +............+..+|. +...+....+.+|+.+.|.|.+.+.+.+. +.|
T Consensus 50 ~~~L~i~~~~~~d~G~--Y~C~~~---~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W 124 (289)
T 3ejj_X 50 GSTLTTRNATFKNTGT--YRCTEL---EDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSL 124 (289)
T ss_dssp CCEEEESSCCGGGCEE--EEEECC---C-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEE
T ss_pred ccEEEEeeeccccCEE--EEEEEe---ccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEE
Confidence 3556777788888666 433321 1111111112223333443 55566778899999999999999877765 999
Q ss_pred Ee-CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe-CCcceEEEEEEEEee
Q psy12421 92 YK-GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN-KHGTDETNCVVIVES 148 (168)
Q Consensus 92 ~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n-~~g~~~~~~~l~v~~ 148 (168)
++ ++..+...........+ .|.|.++...|+|.|+|.+.| ..+.....+.|.|..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~ 181 (289)
T 3ejj_X 125 MREGGRQVLRKTVYFFSPWR--GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNR 181 (289)
T ss_dssp EEGGGEECCTTCCEEEETTT--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEES
T ss_pred EecCCeecCCCccEEECCCC--CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEE
Confidence 86 66666543333333444 699999999999999999994 455556677788874
No 231
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.26 E-value=1.8e-11 Score=86.14 Aligned_cols=111 Identities=11% Similarity=-0.002 Sum_probs=73.8
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
..+|.|...+.. .+.+|++++|.|.+.+ +.+.+.|+|++..+...............|.|.+++..|+|.|.|.+.|.
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 346788777766 8899999999999865 46789999999765310000001223347999999999999999999887
Q ss_pred Ccce--EEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 135 HGTD--ETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 135 ~g~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
.+.. ...+.|.|.+....+.....+...+.+|+
T Consensus 83 ~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~ 117 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGE 117 (242)
T ss_dssp TEECCCCCCEEEEEECCSCCCEEEEESCSEEETTC
T ss_pred CccccCCcceEEEeecccCCCceEccCCCccCCCC
Confidence 5532 34566777653322322233444566665
No 232
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.26 E-value=2.6e-12 Score=87.97 Aligned_cols=122 Identities=15% Similarity=0.166 Sum_probs=78.5
Q ss_pred ceeEEEEeCCCCCCCCCCcccce-----eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CC-Cee
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQV-----RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PP-PTV 89 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i 89 (168)
|.+.+++..|.|. |.|..... .......+.+.. ....+|.+...+....+..|+.+.|.|.+.|. |+ +.+
T Consensus 72 L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v 148 (213)
T 3mj8_L 72 LTISKAQAGDEAD--YYCQSWDGTNSAWVFGSGTKVTVLG-QPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAV 148 (213)
T ss_dssp EEESSCCGGGCEE--EEEEEEETTTTEEEEBCCEEEEEEC-SCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEE
T ss_pred EEECCCChhhCEE--EEEEeccCCcceeEEcCceEEEEeC-CCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEE
Confidence 6677778888666 43222211 111222222221 22267888776666555589999999999986 33 499
Q ss_pred EEEeCCEECCCCC---eEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 90 KWYKGNRELSKRD---YSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 90 ~W~~~~~~~~~~~---~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
.|++++..+.... .... .++ ...|.|..+...|.|.|+|.|.|..+....++
T Consensus 149 ~W~k~g~~l~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 149 TWEADGTPITQGVKTTQPSK-SDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp EEEETTEEECTTEEECCCEE-ETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred EEEcCCcccCCCcccCCcCc-cCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 9999999875421 0011 222 12588999999999999999999987766555
No 233
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.26 E-value=4.7e-11 Score=81.66 Aligned_cols=83 Identities=17% Similarity=0.260 Sum_probs=63.2
Q ss_pred CeEEecCCcEEEEEEEeccCCCeeEEEeC--CEEC-------------CCCCeEEEecCCEEEEEEccCCCCCCeEEEEE
Q psy12421 66 PRVMQVRQTCKLLCCLSGKPPPTVKWYKG--NREL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCV 130 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~~--~~~~-------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 130 (168)
...+.+|+++.|.|.+.+.|.+.+.|++. +..+ ...++......+...|.|.+++.+|+|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 56788999999999999999999999983 2111 11244444455666899999999999999999
Q ss_pred EEeCCc---ceEEEEEEEEee
Q psy12421 131 ATNKHG---TDETNCVVIVES 148 (168)
Q Consensus 131 a~n~~g---~~~~~~~l~v~~ 148 (168)
+.|..| .......|.|..
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~ 109 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLG 109 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEEC
T ss_pred eccCCcceeEEcCceEEEEeC
Confidence 999988 334456677763
No 234
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.26 E-value=3.3e-11 Score=89.41 Aligned_cols=82 Identities=17% Similarity=0.205 Sum_probs=67.6
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-C----CeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcce
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-R----DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-~----~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 138 (168)
+.+..+.+|+++.|.|.+.| |.|.+.|++++..+.. . ++.+ .++ +|.|.+++.+|+|.|+|.|.|..|..
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~--~~~--~L~I~~v~~~D~G~Y~C~a~N~~g~~ 327 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV--RNG--DLFFKKVQVEDGGVYTCYAMGETFNE 327 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE--ETT--EEEESSCCTTSCEEEEEEEECSSCEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe--ecC--eEEEeecCcccCEEEEEEEecCCCcc
Confidence 34568999999999999999 9999999997654322 1 2333 555 79999999999999999999999999
Q ss_pred EEEEEEEEeeCC
Q psy12421 139 ETNCVVIVESEE 150 (168)
Q Consensus 139 ~~~~~l~v~~~p 150 (168)
...+.|.|...+
T Consensus 328 ~~~~~l~V~~~~ 339 (361)
T 2xot_A 328 TLSVELKVYNFT 339 (361)
T ss_dssp EEEEEEEEESSC
T ss_pred EEEEEEEEEeee
Confidence 999999987644
No 235
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.26 E-value=2.7e-11 Score=94.17 Aligned_cols=110 Identities=14% Similarity=0.251 Sum_probs=73.6
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEe-ccCCCeeEEEeCCEECCCCC-eEE-Ee-cC----CEEEEEEccCCCCCC
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLS-GKPPPTVKWYKGNRELSKRD-YSM-SY-SD----GVVSMEIIDCKPEDS 124 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~-~~~-~~-~~----~~~~l~i~~~~~~d~ 124 (168)
.+..+|.+ .+....+.+|+.+.|.|.+. |.|.|.+.|++++..+.... +.. .. .. ....|.|.++..+|+
T Consensus 225 ~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Ds 302 (527)
T 3qs9_E 225 DLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDT 302 (527)
T ss_dssp ESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGC
T ss_pred EEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccC
Confidence 34444544 44567888999999999997 89999999999998765432 111 00 01 123599999999999
Q ss_pred eEEEEEEEeCCcceEEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 125 GEYKCVATNKHGTDETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
|.|+|.|.|. ....+.|.|..+|............+.+|+
T Consensus 303 G~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~ 342 (527)
T 3qs9_E 303 GYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYE 342 (527)
T ss_dssp EEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTC
T ss_pred eEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCC
Confidence 9999999998 566777888766543222211223455554
No 236
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.25 E-value=3.4e-11 Score=84.98 Aligned_cols=80 Identities=19% Similarity=0.216 Sum_probs=61.4
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCC-CeeEEEeC--CEEC-------------CCCCeEEEecCCEEEEEEccCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPP-PTVKWYKG--NREL-------------SKRDYSMSYSDGVVSMEIIDCK 120 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~~~--~~~~-------------~~~~~~~~~~~~~~~l~i~~~~ 120 (168)
+|.+...+....+.+|+++.|.|.+.+.+. +.+.|++. +..+ ...++.........+|.|.+++
T Consensus 149 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 228 (256)
T 3juy_B 149 EIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVE 228 (256)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eeEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCC
Confidence 567777888889999999999999998876 89999983 2211 1133444444555679999999
Q ss_pred CCCCeEEEEEEEeCCc
Q psy12421 121 PEDSGEYKCVATNKHG 136 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~~g 136 (168)
.+|+|.|.|.|.|..+
T Consensus 229 ~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 229 PEDFALYYCQVYGASS 244 (256)
T ss_dssp GGGCSEEEEEECCSSC
T ss_pred HhHCEEEEEEEeeCCC
Confidence 9999999999998543
No 237
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.25 E-value=6.7e-12 Score=83.70 Aligned_cols=81 Identities=21% Similarity=0.327 Sum_probs=62.9
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCC-eeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP-TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
.+|.+...+....+.+|+.+.|.|.+.+.+.+ .+.|++++..+... .. .|.|.+++..|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~-------~~--~L~i~~v~~~d~G~Y~C~~~~~ 73 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET-------NS--SLNIVNAKFEDSGEYKCQHQQV 73 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC-------SS--EEEECSCCGGGCEEEEEECTTS
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC-------ce--EEEEeccceecCEEEEEEcCCc
Confidence 35777778888889999999999999888875 69999999877642 22 7999999999999999999987
Q ss_pred CcceEEEEEEEEe
Q psy12421 135 HGTDETNCVVIVE 147 (168)
Q Consensus 135 ~g~~~~~~~l~v~ 147 (168)
.++.. ..|.|.
T Consensus 74 ~~s~~--~~l~V~ 84 (176)
T 1f2q_A 74 NESEP--VYLEVF 84 (176)
T ss_dssp SCCCC--EEEEEE
T ss_pred ccccc--EEEEEe
Confidence 66544 445554
No 238
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.25 E-value=2.6e-11 Score=85.57 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=65.5
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCC-eeEEEeC--CEECC-------------CCCeEEEecCCEEEEEEccCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPP-TVKWYKG--NRELS-------------KRDYSMSYSDGVVSMEIIDCK 120 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~~~--~~~~~-------------~~~~~~~~~~~~~~l~i~~~~ 120 (168)
+|.+...+....+.+|+++.|.|.+.+.+.+ .+.|+++ +..+. ..++.........+|.|.+++
T Consensus 141 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 220 (257)
T 3gkz_A 141 QIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSME 220 (257)
T ss_dssp CCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCC
Confidence 4667667777889999999999999998887 9999984 22111 123333334455579999999
Q ss_pred CCCCeEEEEEEEeCCcceEE-EEEEEEeeCCC
Q psy12421 121 PEDSGEYKCVATNKHGTDET-NCVVIVESEEE 151 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p~ 151 (168)
.+|+|.|.|.+.|....... ...|.|...+.
T Consensus 221 ~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~~~ 252 (257)
T 3gkz_A 221 AEDAASYFCHQWSSFPFTFGSGTKLEIKRAPH 252 (257)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEECCC--
T ss_pred hHHCEEEEEEEccCCceEEcCCEEEEEEeCCC
Confidence 99999999999875433222 23455654443
No 239
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.25 E-value=2.1e-11 Score=88.85 Aligned_cols=109 Identities=15% Similarity=0.222 Sum_probs=74.3
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCCEECC----------CCCeEEEec-----CCEEEEEEccCCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGNRELS----------KRDYSMSYS-----DGVVSMEIIDCKP 121 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~~~~~----------~~~~~~~~~-----~~~~~l~i~~~~~ 121 (168)
..|...+.+..+.+|+.+.|.|.+.+. |.+.+.|++++.... ..++..... .....|.|.+++.
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 83 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITP 83 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCG
T ss_pred eEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcc
Confidence 345566777889999999999999987 889999999875321 011111100 2233699999999
Q ss_pred CCCeEEEEEEEeCCcceE-----EEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 122 EDSGEYKCVATNKHGTDE-----TNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~~~-----~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
+|+|.|+|.+.|..+... ....|.|...|..+... .+...+.+|+
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~-~~~~~~~~g~ 133 (327)
T 2wng_A 84 ADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVS-GPAARATPQH 133 (327)
T ss_dssp GGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEE-CCSSCBCTTC
T ss_pred ccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceee-ccccccCCCC
Confidence 999999999999876421 24577777766554322 2334555664
No 240
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.25 E-value=2.4e-11 Score=84.66 Aligned_cols=91 Identities=14% Similarity=0.159 Sum_probs=66.9
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccC----CCeeEEEeCC--EEC-------------CCCCeEEEecCCEEEEEEccC
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKP----PPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSMEIIDC 119 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p----~p~i~W~~~~--~~~-------------~~~~~~~~~~~~~~~l~i~~~ 119 (168)
.+...+....+.+|+++.|.|.+.+.| .+.+.|+++. ..+ ...++.+....+..+|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 345566678899999999999999988 7899999852 111 023444444455668999999
Q ss_pred CCCCCeEEEEEEEeCCcc-eEEEEEEEEeeC
Q psy12421 120 KPEDSGEYKCVATNKHGT-DETNCVVIVESE 149 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~ 149 (168)
+..|+|.|.|.+.|..+. ......|.|...
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 113 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGG 113 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecC
Confidence 999999999999998654 333456777654
No 241
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.24 E-value=3.1e-11 Score=81.88 Aligned_cols=112 Identities=11% Similarity=0.146 Sum_probs=65.9
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccC---CCeEEeecCCeEEecCC-cEEEEEEEecc-CCCe
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVES---APNFTFLLRPRVMQVRQ-TCKLLCCLSGK-PPPT 88 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~~g~-~~~l~C~~~g~-p~p~ 88 (168)
...|.+.+++..|.|. |.+.. .+........+...+.. .|.+.... .....|. .+.|.|.+.|. |.|.
T Consensus 69 ~~sL~I~~v~~~D~G~--Y~C~~---~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~ 141 (193)
T 2if7_A 69 SYSLQLSNLKMEDTGS--YRAQI---STKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVS 141 (193)
T ss_dssp TCCEEECSCCGGGCEE--EEEEE---ECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCE
T ss_pred CeEEEECCCCcccCce--EEEEE---EecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceE
Confidence 3557788888888666 43322 22211111111112222 23443322 2233465 89999999985 5899
Q ss_pred eEEEeCCEECCCCCeEEEecCCEEEEEEccCCC-CCCeEEEEEEEeCCcceEEEE
Q psy12421 89 VKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKP-EDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 89 i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
+.|++++..+.. +. .|.|..... .|.|.|+|.|.|..|.....+
T Consensus 142 i~W~~~g~~l~~--------~~--~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 142 FRWEALGNTLSS--------QP--NLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp EEEEETTEEEES--------SS--EEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred EEEEeCCEEcCC--------CC--eEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 999999876532 22 355543344 489999999999999875543
No 242
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.23 E-value=5.5e-11 Score=83.28 Aligned_cols=92 Identities=17% Similarity=0.151 Sum_probs=65.3
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EE---C----------CCCCeEEEecCCEEEEEEccCCCCC
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--RE---L----------SKRDYSMSYSDGVVSMEIIDCKPED 123 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~---~----------~~~~~~~~~~~~~~~l~i~~~~~~d 123 (168)
.+...+....+.+|+++.|.|.+.+.|.+.+.|+++. .. + ...++......+..+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 4556677788999999999999999999999999853 11 1 0234444334455689999999999
Q ss_pred CeEEEEEEEeCCcce-EEEEEEEEeeCC
Q psy12421 124 SGEYKCVATNKHGTD-ETNCVVIVESEE 150 (168)
Q Consensus 124 ~G~Y~C~a~n~~g~~-~~~~~l~v~~~p 150 (168)
+|.|.|.+.|..+.. .....|.|..++
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~ 110 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGG 110 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCC
Confidence 999999999875432 223466776554
No 243
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.23 E-value=6.7e-12 Score=84.71 Aligned_cols=61 Identities=18% Similarity=0.373 Sum_probs=51.3
Q ss_pred EecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcce
Q psy12421 69 MQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 69 ~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 138 (168)
+.+|+++.|.|.+ |.|.+.|+|++..+..... ..+ .|.|.++...|+|.|+|.|.|..|..
T Consensus 119 ~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~----~~~--~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 119 SRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA----TKN--TWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSSSCEEEEECSS---SCSCEEEEETTEECCCSSC----CSS--CCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred cCCCCeEEEEeeC---CCCeEEEEECCEECcccCC----Ccc--eEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 3489999999987 8899999999998864321 222 68999999999999999999998876
No 244
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.23 E-value=2.2e-11 Score=88.57 Aligned_cols=132 Identities=14% Similarity=0.162 Sum_probs=84.2
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEe--ecCCeEEecC---CcEEEEEE-EeccCCCe
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTF--LLRPRVMQVR---QTCKLLCC-LSGKPPPT 88 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~g---~~~~l~C~-~~g~p~p~ 88 (168)
..|.+.+++..|.|. |.|... ..............+..+|.+.. ......+..| +.+.|.|. ..+.|.|.
T Consensus 92 ~~L~I~~v~~~D~G~--Y~C~~~--~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~ 167 (331)
T 3u83_A 92 GTIRLSRLELEDEGV--YICEFA--TFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSV 167 (331)
T ss_dssp CCEEECSCCGGGCEE--EEEEEE--EETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCE
T ss_pred ceEEEcccCcccCcE--EEEEEE--ecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCce
Confidence 457788888888665 433311 11111111222223444666533 4455678888 77999997 88999999
Q ss_pred eEEEeCCEECCCCCeEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCC
Q psy12421 89 VKWYKGNRELSKRDYSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 89 i~W~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
+.|++++..... .......++ ...|.|..+...|.|.|+|.|.|..|....++.|.|..+|.
T Consensus 168 i~W~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~ 233 (331)
T 3u83_A 168 VSWETRLKGEAE-YQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPE 233 (331)
T ss_dssp EEEEESSCCEEE-EEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEE
T ss_pred EEEEcCCCCccc-cceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCe
Confidence 999995321110 001111111 12588888899999999999999999988888888876664
No 245
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.23 E-value=2.5e-11 Score=93.79 Aligned_cols=126 Identities=14% Similarity=0.130 Sum_probs=82.8
Q ss_pred CceeEEEEeCCCCCCCCCCccccee-----ccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCC--e
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVR-----RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP--T 88 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~ 88 (168)
.|.+.+++..|.|. |.|...... ......+.+. .....+|.+...+....+..|+.+.|.|.+.|.|++ .
T Consensus 71 ~L~I~~v~~~D~G~--Y~C~a~n~~g~~~~~~~~~~l~V~-~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~ 147 (523)
T 2rcj_C 71 SLAISGLEAEDESD--YYCASWNSSDNSYVFGTGTKVTVL-GQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVT 147 (523)
T ss_pred EEEECCCChhhCEE--EEEEEccCCCccccccCceEEEec-cCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceE
Confidence 47778888888776 433322111 0111222221 122457777766666677789999999999998765 8
Q ss_pred eEEEeCCEECCCCCeEE---EecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 89 VKWYKGNRELSKRDYSM---SYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 89 i~W~~~~~~~~~~~~~~---~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
+.|++++..+....... ...++ ...|.|.++...|+|.|+|.|.|..|.......+
T Consensus 148 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 210 (523)
T 2rcj_C 148 VAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP 210 (523)
T ss_pred EEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceee
Confidence 99999998775432110 11122 1359999999999999999999998876655544
No 246
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.23 E-value=6e-11 Score=80.71 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=70.1
Q ss_pred eecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-------------------CCeEEEecCCEEEEEEccCCCC
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-------------------RDYSMSYSDGVVSMEIIDCKPE 122 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-------------------~~~~~~~~~~~~~l~i~~~~~~ 122 (168)
..+....+.+|+.+.|.|...+.+.+.+.|++++..... ........++ +|.|.+++..
T Consensus 4 i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~--~L~i~~v~~~ 81 (208)
T 3r4d_A 4 IEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG--SLLFQMITMK 81 (208)
T ss_dssp EEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTS--CEEECSCCGG
T ss_pred ccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCC--eEEEcccccc
Confidence 344456788999999999988889999999987532211 0011112233 6999999999
Q ss_pred CCeEEEEEEEeCC-cceEEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 123 DSGEYKCVATNKH-GTDETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 123 d~G~Y~C~a~n~~-g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
|+|.|.|.+.|.. +.......|.|..++..+.....+.. +.+|+
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~-~~~g~ 126 (208)
T 3r4d_A 82 DMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT-VKELD 126 (208)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS-CCTTC
T ss_pred CCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce-EeeCC
Confidence 9999999999985 55667778888766544433222222 55554
No 247
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.23 E-value=1.3e-11 Score=85.99 Aligned_cols=77 Identities=19% Similarity=0.321 Sum_probs=58.6
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-----EC----------CCCCeEEE--ecCCEEEEEEccCCC
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-----EL----------SKRDYSMS--YSDGVVSMEIIDCKP 121 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-----~~----------~~~~~~~~--~~~~~~~l~i~~~~~ 121 (168)
.+...+....+.+|+++.|.|.+.+.|.|.+.|++++. .+ ...++.+. .......|.|.+++.
T Consensus 129 ~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 208 (238)
T 2p1y_A 129 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQP 208 (238)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCG
T ss_pred eEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCH
Confidence 56666777789999999999999999999999999641 10 01233322 123345799999999
Q ss_pred CCCeEEEEEEEeCC
Q psy12421 122 EDSGEYKCVATNKH 135 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~ 135 (168)
+|+|.|.|.|.|..
T Consensus 209 ~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 209 GDSATYFCAAIDTN 222 (238)
T ss_dssp GGCEEEEEEEEETT
T ss_pred HHCEEEEEEEeeCC
Confidence 99999999999984
No 248
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.23 E-value=1.4e-11 Score=85.09 Aligned_cols=125 Identities=14% Similarity=0.163 Sum_probs=76.2
Q ss_pred CceeEEEEeCCCCCCCCCCccccee-------ccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CCC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVR-------RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP 87 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p 87 (168)
.|.+.+++..|.+. |.|...... ......+.+.. ....+|.+........+..|+.+.|.|.+.|. |.|
T Consensus 82 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p 158 (222)
T 1q9r_B 82 YLQMNTLRAEDSAT--YYCARDHDGYYERFSYWGQGTLVTVSA-AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEP 158 (222)
T ss_dssp EEEECSCCGGGCEE--EEEEECCCSSCCSCCCBCCCEEEEECS-SCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSC
T ss_pred EEEECcCCcccCeE--EEEEEeccCCcccceEeCCceEEEecc-CCCCCCeEEEccccccccCCCcEEEEEEEccEECCC
Confidence 46677778788666 433322211 00112222221 12345666654433345679999999999985 888
Q ss_pred -eeEEEeCCEECCCCCeEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 88 -TVKWYKGNRELSKRDYSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 88 -~i~W~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
.+.|++++..+..........++ ...|.|......| |.|+|.|.|..|.......|
T Consensus 159 ~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 159 VTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp CEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred CEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 99999998765321111111122 1258888888889 99999999999876554443
No 249
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.23 E-value=1.1e-11 Score=88.62 Aligned_cols=125 Identities=15% Similarity=0.051 Sum_probs=80.3
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCe-EEeecCCeEEecCCcEEEEEEEeccCC--CeeEEE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPN-FTFLLRPRVMQVRQTCKLLCCLSGKPP--PTVKWY 92 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~ 92 (168)
.+.+.+++..|.|. |.|... +............+..+|. +...+....+.+|+.+.|.|.+.+ |. +.+.|+
T Consensus 52 ~L~i~~~~~~d~G~--Y~C~~~---n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~ 125 (292)
T 4dkd_C 52 ILSTNNATFQNTGT--YRCTEP---GDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLV 125 (292)
T ss_dssp EEEESSCCGGGCSC--EEECCC---C----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEE
T ss_pred EEEEcccccccCEE--EEEEEc---cCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEE
Confidence 56677788888666 433322 2111112222223333444 455566778899999999999987 54 789999
Q ss_pred eC-CEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEE-EEEEEEee
Q psy12421 93 KG-NRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET-NCVVIVES 148 (168)
Q Consensus 93 ~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~ 148 (168)
++ +..+...........+ .|.|.++...|+|.|+|.+.|..|.... .+.|.|..
T Consensus 126 ~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 126 RVRGRPLMRHTNYSFSPWH--GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQK 181 (292)
T ss_dssp EGGGCCCCSSCCEECCSSS--CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEEC
T ss_pred ecCCCccccCCcccccCCc--eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeC
Confidence 97 4444332222222233 4899999999999999999998776543 77788876
No 250
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.23 E-value=3.2e-11 Score=82.15 Aligned_cols=91 Identities=18% Similarity=0.346 Sum_probs=67.3
Q ss_pred cCCeEEecCCcEEEEEEEeccC----CCeeEEEe----------------CCEECC------CCCeEEEe---cCCEEEE
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKP----PPTVKWYK----------------GNRELS------KRDYSMSY---SDGVVSM 114 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p----~p~i~W~~----------------~~~~~~------~~~~~~~~---~~~~~~l 114 (168)
+....+.+|+++.|.|.+.+.+ .+.+.|++ ++..+. ..+..+.. ..+..+|
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 3456788999999999998877 56999998 333332 11222211 1123369
Q ss_pred EEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCchh
Q psy12421 115 EIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEESKE 154 (168)
Q Consensus 115 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~ 154 (168)
.|.+++..|+|.|.|.+.|..|.....+.|.|..+|..+.
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~ 126 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTR 126 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCE
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCce
Confidence 9999999999999999999999888888999988766543
No 251
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.22 E-value=5.8e-11 Score=83.45 Aligned_cols=82 Identities=18% Similarity=0.266 Sum_probs=67.2
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCC-eeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPP-TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
+|.|...+.+..+.+|+.+.|.|.+.+.|.+ .+.|++++..+... .. .|.|.++...|+|.|+|.+.|..
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~-------~~--~l~i~~~~~~d~G~Y~C~~~~~~ 71 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS-------TP--SYRITSASVNDSGEYRCQRGLSG 71 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC-------SS--EEEESSCCGGGCEEEEEEESSSC
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc-------CC--eEEEecCCcccCeEEEEEEecCC
Confidence 4778888888899999999999999998888 99999999887643 22 68999999999999999999877
Q ss_pred cceEEEEEEEEeeC
Q psy12421 136 GTDETNCVVIVESE 149 (168)
Q Consensus 136 g~~~~~~~l~v~~~ 149 (168)
++.. ..|.|...
T Consensus 72 ~s~~--~~l~v~~~ 83 (262)
T 3rjd_A 72 RSDP--IQLEIHRG 83 (262)
T ss_dssp CCCC--EEEEEECS
T ss_pred cccc--EEEEEecc
Confidence 6543 44555443
No 252
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.22 E-value=5.2e-11 Score=83.53 Aligned_cols=91 Identities=18% Similarity=0.162 Sum_probs=65.4
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-----EC----------CCCCeEEEecCCEEEEEEccCCCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-----EL----------SKRDYSMSYSDGVVSMEIIDCKPE 122 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-----~~----------~~~~~~~~~~~~~~~l~i~~~~~~ 122 (168)
+.+...+....+.+|+++.|.|.+.+.|.+.+.|+++.. .+ ...++......+..+|.|.++..+
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 344555666788899999999999999999999998531 00 123444444555668999999999
Q ss_pred CCeEEEEEEEeCCcceE-EEEEEEEee
Q psy12421 123 DSGEYKCVATNKHGTDE-TNCVVIVES 148 (168)
Q Consensus 123 d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 148 (168)
|+|.|.|.+.|..+... ....|.|..
T Consensus 85 D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 111 (250)
T 3esu_F 85 DIGTYFCQQGNTLPWTFGGGTKLEIRR 111 (250)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred hCEEEEEEEeeCCCceECCCEEEEEEC
Confidence 99999999998765432 233566654
No 253
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.22 E-value=1.2e-11 Score=83.99 Aligned_cols=94 Identities=19% Similarity=0.318 Sum_probs=70.6
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEEC------------C-CCCeEEEecCCEEEEEEccCCCCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNREL------------S-KRDYSMSYSDGVVSMEIIDCKPED 123 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~------------~-~~~~~~~~~~~~~~l~i~~~~~~d 123 (168)
++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ . ..+... ... .|.|.++...|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~--~L~i~~~~~~d 79 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTF--LPT--GITFKSVTRED 79 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEE--ETT--EEECSCCCTTS
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEe--ecc--EEEEeeCCHHH
Confidence 456666777788999999999999999999999999976431 1 112222 223 79999999999
Q ss_pred CeEEEEEEEeCCcc--eEEEEEEEEeeCCCchh
Q psy12421 124 SGEYKCVATNKHGT--DETNCVVIVESEEESKE 154 (168)
Q Consensus 124 ~G~Y~C~a~n~~g~--~~~~~~l~v~~~p~~~~ 154 (168)
+|.|+|.+.|..|. ....+.|.|..+|..+.
T Consensus 80 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~ 112 (209)
T 1nbq_A 80 TGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPT 112 (209)
T ss_dssp CSEEEEEEEETTSSCEECCEEECCEEBCCCCCC
T ss_pred CcEEEEEEecCCCCccceEEEEEEEecCCcCCC
Confidence 99999999998663 34566777777665543
No 254
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.22 E-value=3.9e-12 Score=87.12 Aligned_cols=122 Identities=16% Similarity=0.193 Sum_probs=75.3
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcc----eeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEec-cCCC-ee
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPL----QITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPP-TV 89 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p-~i 89 (168)
.|.+.+++..|.|. |.|. +.+.... ...+.......+|.+...........|+.+.|.|.+.| .|.+ .+
T Consensus 72 ~L~I~~v~~~D~G~--Y~C~---~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v 146 (213)
T 3d9a_L 72 TLSINSVETEDFGM--YFCQ---QSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINV 146 (213)
T ss_dssp EEEESSCCGGGCEE--EEEE---ECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEE
T ss_pred EEEECCCChhhCEE--EEEe---eecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEE
Confidence 45566777777655 4322 2222111 11111112234677766554444447899999999988 5665 89
Q ss_pred EEEeCCEECCCC-CeEE--E-ecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 90 KWYKGNRELSKR-DYSM--S-YSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 90 ~W~~~~~~~~~~-~~~~--~-~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
.|++++..+... .... . ..++ ...|.|.++...|.|.|+|.|.|.........
T Consensus 147 ~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3d9a_L 147 KWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVK 207 (213)
T ss_dssp EEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEE
T ss_pred EEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEE
Confidence 999999887654 1110 0 0111 23799999999999999999999876643333
No 255
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.21 E-value=4e-11 Score=75.23 Aligned_cols=89 Identities=17% Similarity=0.279 Sum_probs=62.6
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCC----CeeEEEeCC-------EEC-------------C--CCCeEEEec---CC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPP----PTVKWYKGN-------REL-------------S--KRDYSMSYS---DG 110 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~----p~i~W~~~~-------~~~-------------~--~~~~~~~~~---~~ 110 (168)
+...+....+.+|+++.|.|.+.+.+. +.+.|++++ ..+ . ..+..+... .+
T Consensus 8 v~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 87 (126)
T 1eaj_A 8 ITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSG 87 (126)
T ss_dssp ESSSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGT
T ss_pred EECCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCC
Confidence 333444567889999999999987654 359999864 111 0 112222111 12
Q ss_pred EEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 111 VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 111 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
..+|.|.+++.+|+|.|.|.+.|..|.....+.|.|..
T Consensus 88 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 88 DASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eEEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 24799999999999999999999988878888888764
No 256
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.21 E-value=6.3e-11 Score=84.89 Aligned_cols=91 Identities=14% Similarity=0.170 Sum_probs=65.0
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEe--CCEECC-------------CCCeEEEecCCEEEEEEccCCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK--GNRELS-------------KRDYSMSYSDGVVSMEIIDCKP 121 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~--~~~~~~-------------~~~~~~~~~~~~~~l~i~~~~~ 121 (168)
++.+...+....+.+|++++|.|.+.+.| +.+.|+| ++..+. ..++.........+|.|.+++.
T Consensus 162 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 240 (282)
T 1qok_A 162 ENVLTQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEA 240 (282)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceEEecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCCh
Confidence 45566667777899999999999999988 9999999 454331 2334433344556799999999
Q ss_pred CCCeEEEEEEEeCCcce-EEEEEEEEee
Q psy12421 122 EDSGEYKCVATNKHGTD-ETNCVVIVES 148 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 148 (168)
+|+|.|.|.+.|..+.. .....|.|..
T Consensus 241 ~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 241 EDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred hHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 99999999998854322 2234566653
No 257
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.21 E-value=9.3e-11 Score=80.40 Aligned_cols=89 Identities=21% Similarity=0.295 Sum_probs=63.7
Q ss_pred eEEeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCC--EEC---------------C--CCCeEEEecCCEEEEEEcc
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGN--REL---------------S--KRDYSMSYSDGVVSMEIID 118 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~--~~~---------------~--~~~~~~~~~~~~~~l~i~~ 118 (168)
.+...+ ...+.+|+++.|.|.+.+. |.+.+.|++.. ... . ..++.+....+..+|.|.+
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISN 81 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESS
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEcc
Confidence 344444 6778899999999999998 89999999832 100 0 1233333344556799999
Q ss_pred CCCCCCeEEEEEEEeCCc-----ceEEEEEEEEee
Q psy12421 119 CKPEDSGEYKCVATNKHG-----TDETNCVVIVES 148 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~ 148 (168)
++.+|+|.|.|.+.|..| .......|.|..
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 116 (218)
T 3s96_B 82 IQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLG 116 (218)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES
T ss_pred CCcccCEEEEEEEecCCCCceeEEEcCcEEEEEec
Confidence 999999999999999876 223345666664
No 258
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.21 E-value=1.5e-10 Score=72.75 Aligned_cols=90 Identities=22% Similarity=0.251 Sum_probs=62.5
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EE---C----------CCCCeEEEecCCEEEEEEccCCCCCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--RE---L----------SKRDYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~---~----------~~~~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
+...+....+.+|++++|.|.+.+.+.+.+.||++. .. + ...++.+....+..+|.|.+++.+|+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 83 (120)
T 1mqk_L 4 LTQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDF 83 (120)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHC
Confidence 345566778899999999999998888899999853 11 1 02344444344556899999999999
Q ss_pred eEEEEEEEeCC-cc-eEEEEEEEEeeC
Q psy12421 125 GEYKCVATNKH-GT-DETNCVVIVESE 149 (168)
Q Consensus 125 G~Y~C~a~n~~-g~-~~~~~~l~v~~~ 149 (168)
|.|.|.+.|.. .. ......|.|...
T Consensus 84 G~Y~C~~~~~~~~~~fg~gt~L~V~~~ 110 (120)
T 1mqk_L 84 GSYYCQHHYGTPPLTFGGGTKLEIKRE 110 (120)
T ss_dssp EEEEEEECSSSSSCCBCCCEEEEEC--
T ss_pred EEEEEEEEeCCCceEECCCeEEEEecC
Confidence 99999998753 11 122345666543
No 259
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.21 E-value=5.9e-11 Score=83.16 Aligned_cols=91 Identities=16% Similarity=0.207 Sum_probs=64.7
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccC-----CCeeEEEeCC--E--E-C----------CCCCeEEEecCCEEEEEEcc
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKP-----PPTVKWYKGN--R--E-L----------SKRDYSMSYSDGVVSMEIID 118 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p-----~p~i~W~~~~--~--~-~----------~~~~~~~~~~~~~~~l~i~~ 118 (168)
.+...+....+.+|+++.|.|.+.+.| .+.+.|+++. . . + ...++......+..+|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 345566778899999999999999887 6899999842 1 1 1 02344444445566899999
Q ss_pred CCCCCCeEEEEEEEeCCcce-EEEEEEEEeeC
Q psy12421 119 CKPEDSGEYKCVATNKHGTD-ETNCVVIVESE 149 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 149 (168)
++.+|+|.|.|.+.|..+.. .....|.|...
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 114 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGG 114 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECC
Confidence 99999999999999986542 22356666654
No 260
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.21 E-value=1.5e-10 Score=71.49 Aligned_cols=77 Identities=21% Similarity=0.287 Sum_probs=58.7
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--E---EC----------CCCCeEEEecCCEEEEEEccCCCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--R---EL----------SKRDYSMSYSDGVVSMEIIDCKPE 122 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~---~~----------~~~~~~~~~~~~~~~l~i~~~~~~ 122 (168)
+.+...+....+.+|+++.|.|.+.+.+.+.+.|+++. . .+ ...++......+..+|.|.+++.+
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 83 (109)
T 2q20_A 4 IQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPE 83 (109)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ccEEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChh
Confidence 44555667788999999999999998888899999863 1 11 023444443445568999999999
Q ss_pred CCeEEEEEEEeC
Q psy12421 123 DSGEYKCVATNK 134 (168)
Q Consensus 123 d~G~Y~C~a~n~ 134 (168)
|+|.|.|.+.|.
T Consensus 84 DsG~Y~C~~~~~ 95 (109)
T 2q20_A 84 DIATYYCQQYDN 95 (109)
T ss_dssp GCEEEEEEECSS
T ss_pred hCEEEEEEEeeC
Confidence 999999999874
No 261
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.21 E-value=6.9e-11 Score=82.80 Aligned_cols=124 Identities=18% Similarity=0.205 Sum_probs=71.6
Q ss_pred ceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEec-cCCC-eeEEEeC
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPP-TVKWYKG 94 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p-~i~W~~~ 94 (168)
|.+.+++..|.|. |.|. +.+............+..+|.+...+. .....|..+.|.|.+.| .|.| .+.|+++
T Consensus 84 L~I~~v~~~D~G~--Y~C~---~~~~~~~~~~~~~L~V~~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~ 157 (248)
T 3pv7_A 84 LRLPGIQLEEAGE--YRCE---VVVTPLKAQGTVQLEVVASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQ 157 (248)
T ss_dssp EEESSCCGGGCEE--EEEE---EEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEE
T ss_pred EEeCCCCHHHCeE--EEEE---EEeCCccceeEEEEEEecCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEEC
Confidence 7788888888776 4332 333222222233334455788776554 33445777889999998 8988 9999999
Q ss_pred CEECCCC------C---eEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcce--EEEEEEEE
Q psy12421 95 NRELSKR------D---YSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTD--ETNCVVIV 146 (168)
Q Consensus 95 ~~~~~~~------~---~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~v 146 (168)
+..+... . ......++ ...|.+......|.|.|+|.|.|..+.. ...+.|.|
T Consensus 158 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 158 TQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred CccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 8643211 0 01111111 2357788888899999999999998874 44555666
No 262
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.21 E-value=1.9e-11 Score=90.34 Aligned_cols=84 Identities=11% Similarity=0.069 Sum_probs=65.1
Q ss_pred CCeEEecCCcEEEEEEEec-----cCCCeeEEEeCCEECCCC---------CeEEEe----------cCCEEEEEEccCC
Q psy12421 65 RPRVMQVRQTCKLLCCLSG-----KPPPTVKWYKGNRELSKR---------DYSMSY----------SDGVVSMEIIDCK 120 (168)
Q Consensus 65 ~~~~~~~g~~~~l~C~~~g-----~p~p~i~W~~~~~~~~~~---------~~~~~~----------~~~~~~l~i~~~~ 120 (168)
....+.+|+.+.|.|.+.+ .|.|.+.|++++..+... .+.+.. .++...|.|.++.
T Consensus 184 ~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 263 (363)
T 1wio_A 184 SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQAL 263 (363)
T ss_dssp EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBC
T ss_pred CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCC
Confidence 3456788999999998877 788999999999876542 222211 2223379999999
Q ss_pred CCCCeEEEEEEEeC--CcceEEEEEEEEee
Q psy12421 121 PEDSGEYKCVATNK--HGTDETNCVVIVES 148 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~ 148 (168)
..|+|.|+|.|.|. .|.....+.|.|..
T Consensus 264 ~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~ 293 (363)
T 1wio_A 264 PQYAGSGNLTLALEAKTGKLHQEVNLVVMR 293 (363)
T ss_dssp GGGCEEEEEEECBTTTTCCEEEEEEEEEEE
T ss_pred cCcCcEEEEEEEEhhhcCeEEEEEeEEEEE
Confidence 99999999999999 99888888877753
No 263
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.20 E-value=8.9e-11 Score=80.23 Aligned_cols=85 Identities=13% Similarity=0.169 Sum_probs=63.2
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EEC-------------CCCCeEEEecCCEEEEEEccCCCCCCeEEE
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~-------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 128 (168)
+....+.+|+++.|.|.+.+.|.+.+.|+++. ..+ ...++......+...|.|.+++.+|+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 56678899999999999999998999999842 211 013444444455668999999999999999
Q ss_pred EEEEeCCcceEE-EEEEEEee
Q psy12421 129 CVATNKHGTDET-NCVVIVES 148 (168)
Q Consensus 129 C~a~n~~g~~~~-~~~l~v~~ 148 (168)
|.+.|..+.... ...|.|..
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp EEECSSSSCEECCCEEEEECC
T ss_pred EEEEcCCCceeCCCEEEEEcC
Confidence 999998765322 33566654
No 264
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.20 E-value=1.4e-10 Score=79.33 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=65.5
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EEC-------------CCCCeEEEecCCEEEEEEccCCCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSMEIIDCKPE 122 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~-------------~~~~~~~~~~~~~~~l~i~~~~~~ 122 (168)
|.+...+....+.+|+++.|.|.+.+.|.+.+.|++.. ... ...++......+..+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 45556677788999999999999999999999999832 100 123444444556668999999999
Q ss_pred CCeEEEEEEEeCCcce-EEEEEEEE
Q psy12421 123 DSGEYKCVATNKHGTD-ETNCVVIV 146 (168)
Q Consensus 123 d~G~Y~C~a~n~~g~~-~~~~~l~v 146 (168)
|+|.|.|.+.|..+.. .....|.|
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEE
T ss_pred cCEEEEEecccCCceEEcCCceEEE
Confidence 9999999999876532 23345565
No 265
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.20 E-value=1.7e-11 Score=87.75 Aligned_cols=122 Identities=11% Similarity=0.065 Sum_probs=81.3
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCC-CeeEEE-
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPP-PTVKWY- 92 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~- 92 (168)
..+.+.++...|.|. |.|.... .. .......+..+|.+...+....+.+|+.+.|.|.+.+ |. +.+.|+
T Consensus 57 ~~L~i~~~~~~d~G~--Y~C~~~n---g~---~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~ 127 (290)
T 2o26_X 57 NEWIQEKAEATRTGT--YTCSNSN---GL---TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIE 127 (290)
T ss_dssp SEEEETTCCGGGCEE--EEEEESS---SC---EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEE
T ss_pred ceEEEeccCHHhCeE--EEEEeeC---Cc---cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEe
Confidence 456666777777665 4333222 11 1111223334555445666788889999999999986 77 999995
Q ss_pred eCCEECCCCCeEEEecCCEEEEEEccCCCCCCe-EEEEEEEeCCcceEE-EEEEEEe
Q psy12421 93 KGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSG-EYKCVATNKHGTDET-NCVVIVE 147 (168)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~a~n~~g~~~~-~~~l~v~ 147 (168)
+++..+...........+ .|.|.++...|+| .|+|.|.|..|.... .+.|.|.
T Consensus 128 ~~g~~l~~~~~~~~~~~~--~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 128 CDGKSLPTDLTFVPNPKA--GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVR 182 (290)
T ss_dssp TTSCCCCTTCEEEEETTT--EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCCcCCCCCCceeeCCCC--CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEE
Confidence 677776554333333344 7999999999999 999999998655332 4677766
No 266
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.20 E-value=4.6e-11 Score=82.33 Aligned_cols=125 Identities=10% Similarity=0.067 Sum_probs=79.8
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccC-cceeeEeeecccCCCeEEeecCCeEEecCCcE-EEEEEEe-ccCCCeeEE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRRE-PLQITFWQETVESAPNFTFLLRPRVMQVRQTC-KLLCCLS-GKPPPTVKW 91 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~-~l~C~~~-g~p~p~i~W 91 (168)
..|.+.+++..|.|. |.|. +.... ..........+..+|.+........ ..|+.+ .|.|.+. |.|.|.+.|
T Consensus 78 ~sL~I~~v~~~D~G~--Y~C~---~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W 151 (221)
T 3eow_R 78 ASLRMFGLRVEDEGS--YTCL---FVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITW 151 (221)
T ss_dssp CEEECCCSSCCCCSC--BEEE---EEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEE
T ss_pred ceEEEccCChHHCeE--EEEE---EEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEE
Confidence 357788888888665 5433 23222 2223333345556888765444333 678788 5999988 899999999
Q ss_pred EeCCEECCCCCeEEEe----cCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEE
Q psy12421 92 YKGNRELSKRDYSMSY----SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVI 145 (168)
Q Consensus 92 ~~~~~~~~~~~~~~~~----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 145 (168)
++++............ ......|.|......|.|.|+|.|.|..+.....+.|.
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~ 209 (221)
T 3eow_R 152 HSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVS 209 (221)
T ss_dssp ECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEEC
T ss_pred EeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEE
Confidence 9874332211100000 11234689999999999999999999988766555443
No 267
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.20 E-value=1.7e-10 Score=71.63 Aligned_cols=84 Identities=19% Similarity=0.172 Sum_probs=59.9
Q ss_pred ecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECC-------------------CCCeEEEecCCEEEEEEccCCCCC
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELS-------------------KRDYSMSYSDGVVSMEIIDCKPED 123 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~-------------------~~~~~~~~~~~~~~l~i~~~~~~d 123 (168)
.+....+.+|+++.|.|.....+.+.+.|+|...... ...+.....++ +|.|.+++.+|
T Consensus 6 ~~~p~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ng--SL~I~nvt~~D 83 (111)
T 2qsq_A 6 ESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNA--SLLIQNIIQND 83 (111)
T ss_dssp EEESSEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTS--CEEECSCCGGG
T ss_pred EeccceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCC--cEEEccCcccC
Confidence 3344578899999999984333445799999753210 11223334556 79999999999
Q ss_pred CeEEEEEEEeCCcc-eEEEEEEEEee
Q psy12421 124 SGEYKCVATNKHGT-DETNCVVIVES 148 (168)
Q Consensus 124 ~G~Y~C~a~n~~g~-~~~~~~l~v~~ 148 (168)
+|.|+|.+.+..+. ......|.|..
T Consensus 84 ~G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 84 AGFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp CEEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred CeEEEEEEEeCCCcEEEEEEEEEEec
Confidence 99999999998764 57777887764
No 268
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.19 E-value=9.7e-12 Score=72.71 Aligned_cols=60 Identities=28% Similarity=0.515 Sum_probs=49.2
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccC-CCCCCeEEEEEEEe
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDC-KPEDSGEYKCVATN 133 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~a~n 133 (168)
++..++..|++++|.|.+.|.|. +.|+|++..+... .++ .|.|.++ ..+|+|.|+|.|.+
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~------~~~--~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK------HDK--HLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTC------CSS--CCBCCSCCTTTTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC------CCC--EEEECccCccCcCEEEEEEEcc
Confidence 44567778999999999999874 9999999988653 223 6899996 78999999999865
No 269
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.19 E-value=1.4e-10 Score=83.48 Aligned_cols=86 Identities=14% Similarity=0.230 Sum_probs=65.4
Q ss_pred CCeEEeecC-CeEEecCCcEEEEEEEe-ccCCCeeEEEeCCEECCCC-CeEEEec--CCEEEEEEccCCCCCCeEEEEEE
Q psy12421 57 APNFTFLLR-PRVMQVRQTCKLLCCLS-GKPPPTVKWYKGNRELSKR-DYSMSYS--DGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 57 ~p~~~~~~~-~~~~~~g~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~-~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
+|.+...+. ...+.+|+.+.|.|.+. +.|.+.+.|++++..+... ++.+... .+...|.|.++...|+|.|+|.+
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 185 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQL 185 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEE
Confidence 555544333 67888999999999999 8999999999999988653 3333322 55667999999999999999999
Q ss_pred EeCCcceEEEE
Q psy12421 132 TNKHGTDETNC 142 (168)
Q Consensus 132 ~n~~g~~~~~~ 142 (168)
.|..+......
T Consensus 186 ~~~~~~~~~~~ 196 (312)
T 2y23_A 186 QDGKATNHSTV 196 (312)
T ss_dssp ESSSCEEEEEE
T ss_pred EeCCceEEEEE
Confidence 87655444333
No 270
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.19 E-value=2.6e-11 Score=82.95 Aligned_cols=85 Identities=16% Similarity=0.255 Sum_probs=59.5
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCC--eeEEEeCCEECCCCCe---EEEecCC----EEEEEEccCCCCCCeE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP--TVKWYKGNRELSKRDY---SMSYSDG----VVSMEIIDCKPEDSGE 126 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~---~~~~~~~----~~~l~i~~~~~~d~G~ 126 (168)
.+|.+...........|+.+.|.|.+.|.+++ .+.|++++..+..... .....++ ...|.|......|.|.
T Consensus 114 ~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ 193 (212)
T 1q0x_L 114 SSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSS 193 (212)
T ss_dssp BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCE
T ss_pred CCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCc
Confidence 56777665544444568899999999986543 8999999988754321 1111222 2358888888899999
Q ss_pred EEEEEEeCCcceEE
Q psy12421 127 YKCVATNKHGTDET 140 (168)
Q Consensus 127 Y~C~a~n~~g~~~~ 140 (168)
|+|.|.|.......
T Consensus 194 Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 194 YSCQVTHEGHSSNK 207 (212)
T ss_dssp EEEEEEETTEEEEE
T ss_pred EEEEEEeCCcceee
Confidence 99999998765443
No 271
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.19 E-value=6.9e-11 Score=84.40 Aligned_cols=93 Identities=19% Similarity=0.215 Sum_probs=67.1
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-----EC----------CCCCeEEEecCCEEEEEEccCCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-----EL----------SKRDYSMSYSDGVVSMEIIDCKP 121 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-----~~----------~~~~~~~~~~~~~~~l~i~~~~~ 121 (168)
.+.+...+....+.+|+++.|.|.+.+.|.+.+.|++++. .+ ...++......+...|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 4566677777889999999999999999999999998541 11 02344444445566899999999
Q ss_pred CCCeEEEEEEEeCCcc-eEEEEEEEEeeC
Q psy12421 122 EDSGEYKCVATNKHGT-DETNCVVIVESE 149 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~ 149 (168)
+|+|.|.|.+.|..+. ......|.|...
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~ 120 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGG 120 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC---
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecC
Confidence 9999999999997554 222345666554
No 272
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.19 E-value=3.6e-10 Score=70.68 Aligned_cols=88 Identities=18% Similarity=0.228 Sum_probs=62.5
Q ss_pred ecCCeEEecCCcEEEEEEEec--cCCCeeEEEeCCEECC--------------CCCeEEEecCCEEEEEEccCCCCCCeE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSG--KPPPTVKWYKGNRELS--------------KRDYSMSYSDGVVSMEIIDCKPEDSGE 126 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g--~p~p~i~W~~~~~~~~--------------~~~~~~~~~~~~~~l~i~~~~~~d~G~ 126 (168)
.+....+.+|+++.|.|...+ .+...+.|++++..+. ..+..+ ..+. +|.|.+++.+|+|.
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~-~~~~--sL~I~~v~~~D~G~ 85 (117)
T 3q0h_A 9 TTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAP-GPGL--GLTLQSLTVNDTGE 85 (117)
T ss_dssp ESCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEE-CSTT--CEEECSCCGGGCEE
T ss_pred ccCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEe-CCce--EEEEeeCChhhCEE
Confidence 455678889999999999887 3345789999865321 112221 1223 69999999999999
Q ss_pred EEEEEEe-CCcceEEEEEEEEeeCCCch
Q psy12421 127 YKCVATN-KHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 127 Y~C~a~n-~~g~~~~~~~l~v~~~p~~~ 153 (168)
|.|.+.+ ..|.......|.|..+|...
T Consensus 86 Y~C~v~~~~~g~~~~~~~L~V~~pp~~~ 113 (117)
T 3q0h_A 86 YFCIYHTYPDGTYTGRIFLEVLESSVAE 113 (117)
T ss_dssp EEEEEEEETTCCEEEEEEEEEECC----
T ss_pred EEEEEEECCCCCeEEEEEEEEEccCccc
Confidence 9998754 57888888999998876544
No 273
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.19 E-value=2.8e-10 Score=77.51 Aligned_cols=79 Identities=10% Similarity=0.151 Sum_probs=64.4
Q ss_pred EecCCcEEEEEEEecc-CCCeeEEEeCCEECCC-CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEE
Q psy12421 69 MQVRQTCKLLCCLSGK-PPPTVKWYKGNRELSK-RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146 (168)
Q Consensus 69 ~~~g~~~~l~C~~~g~-p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 146 (168)
...++.+.|.|.+.+. |.+.+.|++++..+.. .++.+...++...|.|.++...|+|.|+|.+.|..|.....+.|.+
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v 93 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSG 93 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEE
Confidence 4467888999998884 5899999999998876 4455555666667999999999999999999999888877777755
Q ss_pred e
Q psy12421 147 E 147 (168)
Q Consensus 147 ~ 147 (168)
.
T Consensus 94 ~ 94 (212)
T 2r15_A 94 Q 94 (212)
T ss_dssp H
T ss_pred e
Confidence 4
No 274
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.19 E-value=5.4e-11 Score=78.55 Aligned_cols=82 Identities=16% Similarity=0.258 Sum_probs=63.5
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccC-CCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKP-PPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++++..+.... . .+.+.++...|+|.|+|.+.|..
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~-------~--~~~~~~~~~~d~G~Y~C~~~~~~ 74 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHT-------Q--PSYRFKANNNDSGEYTCQTGQTS 74 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCC-------S--SEEEEECCGGGCEEEEEEETTSB
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCc-------c--ceEEEecccccCeEEEEEEeCCC
Confidence 45666777777899999999999999887 67999999998876532 1 35677899999999999999765
Q ss_pred cceEEEEEEEEeeC
Q psy12421 136 GTDETNCVVIVESE 149 (168)
Q Consensus 136 g~~~~~~~l~v~~~ 149 (168)
+.. .+.|.|...
T Consensus 75 ~s~--~~~l~v~~~ 86 (170)
T 3ry4_A 75 LSD--PVHLTVLFE 86 (170)
T ss_dssp CCC--CEEEEEECC
T ss_pred ceE--eEEEEEECC
Confidence 443 455666554
No 275
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.19 E-value=3.6e-11 Score=82.27 Aligned_cols=117 Identities=16% Similarity=0.264 Sum_probs=70.4
Q ss_pred CceeEEEEeCCCCCCCCCCccccee-c-----cCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc----C
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVR-R-----REPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK----P 85 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~----p 85 (168)
.|.+.+++..|.+. |.|...... . ...+.+.+. ....+|.+.. +. .+.+|+.+.|.|.+.+. |
T Consensus 83 sL~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~~l~V~--~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p 155 (214)
T 2zg1_A 83 SLSIGDARMEDTGS--YFFRVERGRDVKYSYQQNKLNLEVT--ALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGP 155 (214)
T ss_dssp CEEECSCCGGGCEE--EEEEEEETTTEEEECCSSCEEEEEE--CCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSS
T ss_pred EEEEccCCHhhCce--EEEEEEcCCCceeeecCCceEEEEe--cCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCC
Confidence 47788888888666 433322111 0 012223322 2223566543 22 25689999999999774 8
Q ss_pred CCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 86 PPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 86 ~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
.|.+.|++++..+..... ...+ .|.|..+...|.|.|+|.|.|..+.......+
T Consensus 156 ~p~v~W~~~~~~~~~~~~---~~~~--~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v 209 (214)
T 2zg1_A 156 PLTFSWTGNALSPLDPET---TRSS--ELTLTPRPEDHGTNLTCQMKRQGAQVTTERTV 209 (214)
T ss_dssp CCEEEEESSTTSSSCSSC---CCSS--EEEECCCTTCCSCEEEEEEECC----CCEEEE
T ss_pred CceEEEeCCCCccCCCCc---eeEE--EEEEecccHHcCcEEEEEEEeCCCCcceEEEE
Confidence 899999999864432221 1223 78999999999999999999986554333333
No 276
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.18 E-value=4.1e-11 Score=83.73 Aligned_cols=87 Identities=18% Similarity=0.296 Sum_probs=63.2
Q ss_pred ecCCeEEecCCcEEEEEEEec---cCCCeeEEEeCCEECC-------------------------------CCCeEEEec
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSG---KPPPTVKWYKGNRELS-------------------------------KRDYSMSYS 108 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g---~p~p~i~W~~~~~~~~-------------------------------~~~~~~~~~ 108 (168)
.+....+.+|+++.|.|.+.+ .|.+.+.|++++.... ..+.. ...
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~ 86 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRAS-VAN 86 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEE-CSC
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEE-ecc
Confidence 344577889999999999988 8899999999874320 01111 111
Q ss_pred CCEEEEEEccCCCCCCeEEEEEEEeCCcce-----EEEEEEEEeeCC
Q psy12421 109 DGVVSMEIIDCKPEDSGEYKCVATNKHGTD-----ETNCVVIVESEE 150 (168)
Q Consensus 109 ~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~p 150 (168)
.+...|.|.+++.+|+|.|.|.+.|..+.. ...+.|.|..++
T Consensus 87 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~ 133 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT 133 (250)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS
T ss_pred CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccC
Confidence 122369999999999999999999987653 457788887653
No 277
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.18 E-value=9.1e-11 Score=83.37 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=67.8
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccC------CCeeEEEeCC--EEC-------------CCCCeEEEecCCEEEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKP------PPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSME 115 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p------~p~i~W~~~~--~~~-------------~~~~~~~~~~~~~~~l~ 115 (168)
.+.+...+....+.+|+++.|.|.+.+.+ .+.+.|+++. ..+ ...++......+...|.
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 45666777788899999999999998887 6889999852 211 02344444444556899
Q ss_pred EccCCCCCCeEEEEEEEeCCcce-EEEEEEEEeeCC
Q psy12421 116 IIDCKPEDSGEYKCVATNKHGTD-ETNCVVIVESEE 150 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~p 150 (168)
|.+++.+|+|.|.|.+.|..+.. .....|.|...+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~ 120 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGG 120 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCC
Confidence 99999999999999999875432 223467776553
No 278
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.18 E-value=1.1e-10 Score=82.00 Aligned_cols=92 Identities=16% Similarity=0.168 Sum_probs=67.5
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccC-----CCeeEEEeCC--EEC-----------C--CCCeEEEecCCEEEEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKP-----PPTVKWYKGN--REL-----------S--KRDYSMSYSDGVVSMEI 116 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p-----~p~i~W~~~~--~~~-----------~--~~~~~~~~~~~~~~l~i 116 (168)
++.+...+....+.+|+++.|.|.+.+.| .+.+.|+++. ..+ . ..++......+...|.|
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 117 (254)
T 2c1o_A 38 ELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKI 117 (254)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEE
Confidence 67777778888999999999999999987 4899999743 211 1 13444444556668999
Q ss_pred ccCCCCCCeEEEEEEEeCCcceEE-EEEEEEee
Q psy12421 117 IDCKPEDSGEYKCVATNKHGTDET-NCVVIVES 148 (168)
Q Consensus 117 ~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~ 148 (168)
.+++..|+|.|.|.+.|..+.... ...|.|..
T Consensus 118 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~ 150 (254)
T 2c1o_A 118 SRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKR 150 (254)
T ss_dssp SSCCGGGCSEEEEEECSSSSCEEBCCEEEEECC
T ss_pred CcCCcccCEEEEEEEEcCcceEecCCEEEEECC
Confidence 999999999999999998654321 23455543
No 279
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.18 E-value=1.9e-11 Score=88.75 Aligned_cols=110 Identities=15% Similarity=0.189 Sum_probs=73.4
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
..-.+|.|...+. ..+.+|+.+.|.|.+.+. .+.+.|+|++..+..... .....+ .|.|.+++..|+|.|+|.|.
T Consensus 20 ~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~-~~~~~~--~L~I~~v~~~D~G~Y~C~a~ 94 (316)
T 3vh8_G 20 GGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFH-GRIFQE--SFNMSPVTTAHAGNYTCRGS 94 (316)
T ss_dssp ----CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHH-HCCBSS--CEEECSCCGGGCEEEEEEEB
T ss_pred CCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeec-CCcceE--EEEECCCCcccCeEEEEEEE
Confidence 4456788887776 678899999999999887 789999999876543110 011223 69999999999999999998
Q ss_pred eCC-----cceEEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 133 NKH-----GTDETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 133 n~~-----g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
|.. +.....+.|.|...+..+.....+...+.+|+
T Consensus 95 ~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~ 134 (316)
T 3vh8_G 95 HPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGE 134 (316)
T ss_dssp CSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTC
T ss_pred cCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCC
Confidence 642 22344566777655433333333444466665
No 280
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.18 E-value=6.9e-11 Score=79.06 Aligned_cols=82 Identities=15% Similarity=0.228 Sum_probs=61.4
Q ss_pred eEEecCCcEEEEEEEec--cCCCeeEEEeCCEECC-----------CCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 67 RVMQVRQTCKLLCCLSG--KPPPTVKWYKGNRELS-----------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g--~p~p~i~W~~~~~~~~-----------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+.+|+.+.|.|.... .+.+.+.|+|++..+. ..++.+ ..++ +|.|.+++.+|+|.|+|.+.|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~-~~~g--sL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEI-LANG--DLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEE-CTTS--CEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEE-CCCC--cEEEcccccccCEEEEEEEEe
Confidence 45678999999995333 5677899999986431 123332 3444 599999999999999999999
Q ss_pred CCcce--EEEEEEEEeeCCC
Q psy12421 134 KHGTD--ETNCVVIVESEEE 151 (168)
Q Consensus 134 ~~g~~--~~~~~l~v~~~p~ 151 (168)
..|.. ...+.|.|..++.
T Consensus 83 ~~g~~~~~~~~~l~V~~~~~ 102 (176)
T 1hng_A 83 TNGTRILNKALDLRILEMVS 102 (176)
T ss_dssp TTCCEEEEEEEEEEEECCCC
T ss_pred CCCCEEEEEEEEEEEeCCCC
Confidence 99986 6667788876543
No 281
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.18 E-value=7.1e-11 Score=84.62 Aligned_cols=93 Identities=20% Similarity=0.282 Sum_probs=62.1
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEec-cC-CCeeEEEeCC--EECC-------------CCCeEEEecCCEEEEEEccC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSG-KP-PPTVKWYKGN--RELS-------------KRDYSMSYSDGVVSMEIIDC 119 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p-~p~i~W~~~~--~~~~-------------~~~~~~~~~~~~~~l~i~~~ 119 (168)
++.+...+. ..+.+|+++.|.|.+.+ .+ .+.+.|++.. ..+. ..++..........|.|.++
T Consensus 140 ~~~v~~~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 218 (280)
T 3fku_X 140 QPGLTQPPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGL 218 (280)
T ss_dssp CCSBBCCSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSC
T ss_pred eeEEEeCCc-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCC
Confidence 455555555 78899999999999987 44 4889999832 2111 13344444455567999999
Q ss_pred CCCCCeEEEEEEEeCCcc---eEEEEEEEEeeCC
Q psy12421 120 KPEDSGEYKCVATNKHGT---DETNCVVIVESEE 150 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~~g~---~~~~~~l~v~~~p 150 (168)
+.+|+|.|.|.+.|..+. ......|.|...+
T Consensus 219 ~~~DsG~Y~C~~~~~~~~~~~~g~~t~l~V~~~~ 252 (280)
T 3fku_X 219 QPEDEADYYCSTWDSSLSAVVFGGGTKLTVLGQP 252 (280)
T ss_dssp CGGGCSEEEEEEEETTTTEEEEBCCCEEEEC---
T ss_pred CHHHCEEEEEEEecCCCCceEECCCEEEEECCCC
Confidence 999999999999987632 1223356665443
No 282
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=1.2e-11 Score=91.17 Aligned_cols=97 Identities=16% Similarity=0.200 Sum_probs=77.8
Q ss_pred ccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCe-EEEEEEE
Q psy12421 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSG-EYKCVAT 132 (168)
Q Consensus 54 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~a~ 132 (168)
.+.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+...... ........|.|.++...|+| .|+|.|.
T Consensus 155 ~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~~Y~C~a~ 233 (347)
T 2ifg_A 155 SCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK-SGGLPSLGLTLANVTSDLNRKNVTCWAE 233 (347)
T ss_dssp TCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC-CCCSSEEEEEEESCCSTTTTCCEEECCE
T ss_pred cCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc-ceecccceEEEeeCChHHCCCeEEEEEE
Confidence 456899998888899999999999999999999999999988654321100 01223447999999999999 9999999
Q ss_pred eCCcceEEEEEEEEeeCCC
Q psy12421 133 NKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~p~ 151 (168)
|..|.....+.|.|..+|.
T Consensus 234 n~~g~~~~~~~l~V~~~P~ 252 (347)
T 2ifg_A 234 NDVGRAEVSVQVNVSFPAS 252 (347)
T ss_dssp ETTEECCEEECCCCBEEEE
T ss_pred cCCCCEEEEEEEEEcCCCe
Confidence 9999988888777766554
No 283
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.18 E-value=1.5e-11 Score=84.16 Aligned_cols=83 Identities=17% Similarity=0.312 Sum_probs=58.5
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEec-cCCC-eeEEEeCCEECCCC-CeEE---EecCC----EEEEEEccCCCCCCe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPP-TVKWYKGNRELSKR-DYSM---SYSDG----VVSMEIIDCKPEDSG 125 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p-~i~W~~~~~~~~~~-~~~~---~~~~~----~~~l~i~~~~~~d~G 125 (168)
.+|.+........+..|+.+.|.|.+.| .|.+ .+.|++++..+... .... ...++ .+.|.|..+...|+|
T Consensus 110 ~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 189 (210)
T 1lk3_L 110 AAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHN 189 (210)
T ss_dssp BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred cCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCC
Confidence 3677765544433447999999999997 4544 89999999987654 1110 01122 126899999999999
Q ss_pred EEEEEEEeCCcce
Q psy12421 126 EYKCVATNKHGTD 138 (168)
Q Consensus 126 ~Y~C~a~n~~g~~ 138 (168)
.|+|.|.|.....
T Consensus 190 ~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 190 LYTCEVVHKTSSS 202 (210)
T ss_dssp EEEEEEECTTCSS
T ss_pred cEEEEEEecCCCC
Confidence 9999999986644
No 284
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.17 E-value=2.5e-10 Score=71.69 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=58.5
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--E---EC----------CCCCeEEEecCCEEEEEEccCCCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--R---EL----------SKRDYSMSYSDGVVSMEIIDCKPE 122 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~---~~----------~~~~~~~~~~~~~~~l~i~~~~~~ 122 (168)
+.+...+....+.+|++++|.|.+.+.+.+.+.|+++. . .+ ...++......+...|.|.+++.+
T Consensus 4 ~~v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 83 (119)
T 2e27_L 4 IQMTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPE 83 (119)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGG
T ss_pred ceeEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChH
Confidence 34555666788999999999999998888899999853 1 11 023444444455668999999999
Q ss_pred CCeEEEEEEEeC
Q psy12421 123 DSGEYKCVATNK 134 (168)
Q Consensus 123 d~G~Y~C~a~n~ 134 (168)
|+|.|.|.+.|.
T Consensus 84 DsG~Y~C~~~~~ 95 (119)
T 2e27_L 84 DAATYYCLQYDN 95 (119)
T ss_dssp GCEEEEEEECGG
T ss_pred HCEEEEEEEccC
Confidence 999999999875
No 285
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.17 E-value=5.1e-10 Score=67.90 Aligned_cols=82 Identities=20% Similarity=0.230 Sum_probs=59.0
Q ss_pred eEEecCCcEEEEEEEec-cCCCeeEEEeCC----EECCCCCe---EEEe--cCCEEEEEEccCCCCCCeEEEEEEEeCCc
Q psy12421 67 RVMQVRQTCKLLCCLSG-KPPPTVKWYKGN----RELSKRDY---SMSY--SDGVVSMEIIDCKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g-~p~p~i~W~~~~----~~~~~~~~---~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 136 (168)
..+..|+.+.|.|.+.+ .|.|.+.|.|.+ ..+..... .... ......|.|..+..+|+|.|.|.|.|..|
T Consensus 24 ~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~g 103 (122)
T 1xau_A 24 HSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQ 103 (122)
T ss_dssp EEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETTE
T ss_pred EEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCCCC
Confidence 56889999999999976 689999999965 23322111 1111 11345799999999999999999999988
Q ss_pred ce-EEEEEEEEee
Q psy12421 137 TD-ETNCVVIVES 148 (168)
Q Consensus 137 ~~-~~~~~l~v~~ 148 (168)
.. +.+..|.|.+
T Consensus 104 ~ieSHs~ti~V~~ 116 (122)
T 1xau_A 104 VINSHSVTIHVRE 116 (122)
T ss_dssp EEECCCEEEEEC-
T ss_pred ceeeeEEEEEEEe
Confidence 74 3355566654
No 286
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.17 E-value=2e-11 Score=83.87 Aligned_cols=84 Identities=19% Similarity=0.280 Sum_probs=58.3
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEec-cCCC-eeEEEeCCEECCCC-CeEE--E-ecCC----EEEEEEccCCCCCCe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPP-TVKWYKGNRELSKR-DYSM--S-YSDG----VVSMEIIDCKPEDSG 125 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p-~i~W~~~~~~~~~~-~~~~--~-~~~~----~~~l~i~~~~~~d~G 125 (168)
.+|.+...........|+.+.|.|.+.| .|.| .+.|++++..+... .... . ..++ .+.|.|......|.|
T Consensus 113 ~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g 192 (216)
T 2xzc_L 113 AAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHK 192 (216)
T ss_dssp BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCC
T ss_pred CCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCC
Confidence 5677765443333346889999999998 4554 89999999987654 1110 0 1122 126889888999999
Q ss_pred EEEEEEEeCCcceE
Q psy12421 126 EYKCVATNKHGTDE 139 (168)
Q Consensus 126 ~Y~C~a~n~~g~~~ 139 (168)
.|+|.|.|......
T Consensus 193 ~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 193 VYACEVTHQGLSSP 206 (216)
T ss_dssp EEEEEEECTTCSSC
T ss_pred cEEEEEEcCCCCCc
Confidence 99999999875544
No 287
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.17 E-value=2e-11 Score=83.53 Aligned_cols=124 Identities=14% Similarity=0.115 Sum_probs=78.9
Q ss_pred CceeEEEEeCCCCCCCCCCcccce----eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccC--CCee
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQV----RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKP--PPTV 89 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i 89 (168)
.|.+.+++..|.|. |.|..... .......+.+. .....+|.+...+....+..|+.+.|.|.+.|.+ .+.+
T Consensus 69 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~l~V~-~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v 145 (211)
T 3tv3_L 69 SLTVSGLQTDDEAV--YYCGSLVGNWDVIFGGGTKLTVL-GQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTV 145 (211)
T ss_dssp EEEEESCCGGGCEE--EEEEEEETTTEEEECCCEEEEEC-CSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEE
T ss_pred EEEECCCChhHCEE--EEEEEecCCCceeECCCceEEEe-CCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEE
Confidence 36678888888666 43332211 11122222222 1223678887766555555799999999999853 5789
Q ss_pred EEEeCCEECCCCC---eEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 90 KWYKGNRELSKRD---YSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 90 ~W~~~~~~~~~~~---~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
.|++++..+.... ......++ ...|.|......|.|.|+|.|.|..+....++
T Consensus 146 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 146 AWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp EEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred EEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 9999998875411 01111122 13588888888899999999999987766554
No 288
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.17 E-value=1.4e-10 Score=78.95 Aligned_cols=112 Identities=12% Similarity=0.130 Sum_probs=69.5
Q ss_pred CceeEEEEeCCCCCCCCCCcccce-------eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCe
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQV-------RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPT 88 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~ 88 (168)
.+.+.++...|.|. |.|..... .....+.+.+. ....+|.+...+. ..+.+|++++|.|.+.+ +.+.
T Consensus 64 ~l~I~~v~~~D~G~--Y~C~a~~~~~~~~~~~~s~~~~l~V~--~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~ 137 (201)
T 1nkr_A 64 NFSISRMTQDLAGT--YRCYGSVTHSPYQVSAPSDPLDIVII--GLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDM 137 (201)
T ss_dssp EEEESSCCGGGCEE--EEEEEEBTTBTTCCCCCCCCEEEEEE--CSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSE
T ss_pred EEEeccCCcccCeE--EEEeEecCCCCccccCCCCCEEEEee--ccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCce
Confidence 35566677777665 43332110 11122233332 2234677766554 57889999999999876 6789
Q ss_pred eEEEeCCEECCCCCeEEEecCC--EEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 89 VKWYKGNRELSKRDYSMSYSDG--VVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 89 i~W~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
+.|+|++..+...........+ ...|.|.+++ |+|.|+|.|.+..
T Consensus 138 ~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 138 YHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred EEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 9999998765432111111111 3368999998 9999999998763
No 289
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.17 E-value=1.4e-10 Score=81.99 Aligned_cols=97 Identities=12% Similarity=0.088 Sum_probs=67.4
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC-Cc
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK-HG 136 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~-~g 136 (168)
|.+. +....+.+|+.+.|.|.+. |.|.+.| +|..+... +....|.+......|.|.|+|.|.|. .|
T Consensus 101 p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~-------~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g 167 (265)
T 2oz4_A 101 PNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL-------GPRAQLLLKATPEDNGRSFSCSATLEVAG 167 (265)
T ss_dssp CEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC-------SSEECCEEECCGGGTTEEEEEEEEEECSS
T ss_pred ceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC-------CCcEEEEEccccccCCceEEEEEEcCCCC
Confidence 4443 4466788899999999987 9999999 77666332 12235788889999999999999854 47
Q ss_pred ceE---EEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 137 TDE---TNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 137 ~~~---~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
... ..+.|.|..+|............+.+|+
T Consensus 168 ~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~ 201 (265)
T 2oz4_A 168 QLIHKNQTRELRVLYGPRLDERDCPGNWTWPENS 201 (265)
T ss_dssp SEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTC
T ss_pred CcccccccEEEEEEeCCccccccCCCccEEcCCC
Confidence 655 6677888777665333212233566665
No 290
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.16 E-value=2.8e-10 Score=70.66 Aligned_cols=85 Identities=16% Similarity=0.286 Sum_probs=59.0
Q ss_pred CeEEecCCcEEEEEEEe-ccCCCe----eEEEeCCEEC-------------C-CCCeEEEec---C--CEEEEEEccCCC
Q psy12421 66 PRVMQVRQTCKLLCCLS-GKPPPT----VKWYKGNREL-------------S-KRDYSMSYS---D--GVVSMEIIDCKP 121 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~-g~p~p~----i~W~~~~~~~-------------~-~~~~~~~~~---~--~~~~l~i~~~~~ 121 (168)
...+.+|+++.|.|.+. +.+.+. +.|++++... . ..+..+... . +..+|.|.+++.
T Consensus 9 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 88 (118)
T 3udw_C 9 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRV 88 (118)
T ss_dssp EEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCG
T ss_pred eEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecCh
Confidence 36778999999999984 455444 8999985311 0 111111110 0 134799999999
Q ss_pred CCCeEEEEEEEe-CCcceEEEEEEEEeeCC
Q psy12421 122 EDSGEYKCVATN-KHGTDETNCVVIVESEE 150 (168)
Q Consensus 122 ~d~G~Y~C~a~n-~~g~~~~~~~l~v~~~p 150 (168)
+|+|.|.|.+.+ ..|.......|.|..+|
T Consensus 89 ~D~G~Y~C~v~~~~~~~~~~~~~L~V~~~P 118 (118)
T 3udw_C 89 EDEGNYTCLFVTFPQGSRSVDIWLRVLAKP 118 (118)
T ss_dssp GGCEEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred HHCeEEEEEEEECCCCCccceEEEEEEeCC
Confidence 999999999999 77877888888887654
No 291
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.16 E-value=2.7e-10 Score=91.53 Aligned_cols=96 Identities=14% Similarity=0.144 Sum_probs=66.3
Q ss_pred CeEEeecCC-eEEecCCcEEEEEEEec--cCCCeeEEEeCCEECCCCCeEEE---------ecCCEEEEEEccCCCCCCe
Q psy12421 58 PNFTFLLRP-RVMQVRQTCKLLCCLSG--KPPPTVKWYKGNRELSKRDYSMS---------YSDGVVSMEIIDCKPEDSG 125 (168)
Q Consensus 58 p~~~~~~~~-~~~~~g~~~~l~C~~~g--~p~p~i~W~~~~~~~~~~~~~~~---------~~~~~~~l~i~~~~~~d~G 125 (168)
|.+...+.. ..+.+|+.+.|.|.+.+ .+.+.+.|++++..+........ .......|.|.++...|+|
T Consensus 224 ~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 303 (772)
T 3v2a_R 224 YDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQG 303 (772)
T ss_dssp EEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCS
T ss_pred ceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCe
Confidence 444444444 68999999999999987 55678999999876543221110 0112336999999999999
Q ss_pred EEEEEEEeCCcceEEEEEEEEeeCCCch
Q psy12421 126 EYKCVATNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 126 ~Y~C~a~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
.|+|.+.|..|.......|.|..+|...
T Consensus 304 ~Y~C~~~~~~~~~~~~~~l~V~~~p~~~ 331 (772)
T 3v2a_R 304 LYTCAASSGLMTKKNSTFVRVHEKPFVA 331 (772)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCC--
T ss_pred EEEEEEEcCCcceeEEEEEEEeCCCeeE
Confidence 9999999999988888889988876543
No 292
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=99.16 E-value=3.6e-10 Score=73.23 Aligned_cols=95 Identities=19% Similarity=0.234 Sum_probs=62.1
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--E---EC----------CCCCeEEEecCCEEEEEEccCCCCCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--R---EL----------SKRDYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~---~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
+...+....+.+|++++|.|.+.+.+...+.||+.. . .+ ...++.........+|.|.+++.+|+
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~Ds 82 (143)
T 3u6r_L 3 LTQSPATLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPEDF 82 (143)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred EEECCCEEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccCC
Confidence 445666678899999999999988777789999852 1 11 12344444445566899999999999
Q ss_pred eEEEEEEEeCCcceEEEEEEEEeeCCCchh
Q psy12421 125 GEYKCVATNKHGTDETNCVVIVESEEESKE 154 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~ 154 (168)
|.|.|.+.+..........|.|...+..+.
T Consensus 83 G~Y~C~~~~~~~~fg~gt~L~V~~~~~~p~ 112 (143)
T 3u6r_L 83 AVYYCQQRSDWVTFGGGTKVEIKAAADDDD 112 (143)
T ss_dssp EEEEEEECSSBCEECCCEEEEEC-------
T ss_pred EEEEEEEecCCCEECCCEEEEECCCCCCCC
Confidence 999999886541112234566665444433
No 293
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.15 E-value=1.7e-10 Score=81.46 Aligned_cols=82 Identities=18% Similarity=0.332 Sum_probs=58.6
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE--EC---C-------------CCCeEEEe-cCCEEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR--EL---S-------------KRDYSMSY-SDGVVSMEI 116 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~--~~---~-------------~~~~~~~~-~~~~~~l~i 116 (168)
.+|.+...+....+.+|+++.|.|.+.+. .+.+.|+++.. .+ . ..++.... ......|.|
T Consensus 136 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I 214 (256)
T 3tf7_C 136 SEAAVTQSPRNKVTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTL 214 (256)
T ss_dssp --CCEEESCSEEEEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEE
T ss_pred CccEEEecCCEEEEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEE
Confidence 46777777878888899999999999886 78999998421 00 0 11222211 123347999
Q ss_pred ccCCCCCCeEEEEEEEeCCcce
Q psy12421 117 IDCKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 117 ~~~~~~d~G~Y~C~a~n~~g~~ 138 (168)
.+++.+|+|.|.|.|.|..|..
T Consensus 215 ~~v~~~DsG~Y~C~a~n~~g~~ 236 (256)
T 3tf7_C 215 ESASPSQTSLYFCASSDAPGQL 236 (256)
T ss_dssp SSCCGGGCEEEEEEEEEETTEE
T ss_pred CCCCHHHCEEEEEEecCCCCcc
Confidence 9999999999999999987654
No 294
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.15 E-value=1.9e-10 Score=70.69 Aligned_cols=75 Identities=19% Similarity=0.296 Sum_probs=56.9
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--E---EC----------CCCCeEEEecCCEEEEEEccCCCCCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--R---EL----------SKRDYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~---~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
+...+....+.+|++++|.|.+.+.+.+.+.|+++. . .+ ...++......+...|.|.+++.+|+
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 83 (107)
T 1i8k_A 4 LTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDV 83 (107)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEeCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHC
Confidence 344566678889999999999998888899999853 1 11 02344444445566899999999999
Q ss_pred eEEEEEEEeC
Q psy12421 125 GEYKCVATNK 134 (168)
Q Consensus 125 G~Y~C~a~n~ 134 (168)
|.|.|.+.+.
T Consensus 84 G~Y~C~~~~~ 93 (107)
T 1i8k_A 84 GDYYCLQSFN 93 (107)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEeeC
Confidence 9999999875
No 295
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.15 E-value=7.6e-11 Score=85.84 Aligned_cols=86 Identities=12% Similarity=0.249 Sum_probs=56.1
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEeccCCC--eeEEEeCCEECCCC--CeEEEecCCE----EEEEEccCCCCCC
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP--TVKWYKGNRELSKR--DYSMSYSDGV----VSMEIIDCKPEDS 124 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~--~~~~~~~~~~----~~l~i~~~~~~d~ 124 (168)
.+..+|.+...+.. +.+|+.+.|.|.+.|.+++ .+.|+++|..+... .......++. ..|.|..+...|.
T Consensus 218 ~v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~ 295 (327)
T 2wng_A 218 TIRVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDD 295 (327)
T ss_dssp TBCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------C
T ss_pred ccCCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCC
Confidence 34567888765554 6789999999999996544 79999999877431 1111222231 3578888899999
Q ss_pred eEEEEEEEeCCcceEE
Q psy12421 125 GEYKCVATNKHGTDET 140 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~ 140 (168)
|.|+|.|.|..|....
T Consensus 296 G~Y~C~a~N~~~~~~s 311 (327)
T 2wng_A 296 VKLTCQVEHDGQPAVS 311 (327)
T ss_dssp CEEEEEEEETTCCCEE
T ss_pred CEEEEEEEeCCCCCch
Confidence 9999999999987543
No 296
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.15 E-value=7.3e-11 Score=80.72 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=72.9
Q ss_pred CceeEEEEeCCCCCCCCCCcccce-----eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEec-cCCCee
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQV-----RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPPTV 89 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p~i 89 (168)
.|.+.+++..|.|. |.|..... .......+.+. ....+|.+........+..|+.+.|.|.+.| .|.|.+
T Consensus 72 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~l~V~--~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v 147 (213)
T 3nl4_L 72 TLTISDLECADAAT--YYCQSTYENPTYVSFGGGTEVGVK--GDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTV 147 (213)
T ss_dssp EEEECSCCGGGCEE--EEEEECCSSTTTCEECCCEEEEEE--CCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEE
T ss_pred EEEECCCChHHCEE--EEEecCCCCceeEEeCCCeEEEEe--CCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEE
Confidence 36677778888666 43222211 11112222222 2456777766555555667999999999998 899999
Q ss_pred EEEeCCEECCCCCeEEE----ecCC----EEEEEEccCCCCCCeEEEEEEE
Q psy12421 90 KWYKGNRELSKRDYSMS----YSDG----VVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 90 ~W~~~~~~~~~~~~~~~----~~~~----~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
.|++++..+........ ..++ ...|.|..+...|.|.|+|.|.
T Consensus 148 ~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 148 TWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred EEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 99999998754210000 0111 1358899999999999999999
No 297
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.15 E-value=1.9e-10 Score=70.96 Aligned_cols=73 Identities=19% Similarity=0.246 Sum_probs=52.3
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCC-----eeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP-----TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCV 130 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-----~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 130 (168)
.+|.+...+. ..+.+|+.++|.|.+.+.+.. .+.|+|++..+.. ..... .|.|.+++..|+|.|.|.
T Consensus 7 ~kP~l~~~p~-~~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~-----~~~~~--~l~i~~v~~~dsG~Y~C~ 78 (108)
T 4hwn_A 7 PAPILRAVPS-AEPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS-----RGLSS--EFQIPTASEDHSGSYWCE 78 (108)
T ss_dssp CCCEEEEESC-SSCBTTCCEEEEEEC---------CCEEEEEETTEEEEE-----EESCC--EEEESSCCGGGCEEEEEE
T ss_pred CCCEEEecCC-CcCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC-----CCccc--EEEeCccCcccCeEEEEE
Confidence 3567666554 357789999999998765544 4899999986542 11233 799999999999999999
Q ss_pred EEeCCc
Q psy12421 131 ATNKHG 136 (168)
Q Consensus 131 a~n~~g 136 (168)
+.|..+
T Consensus 79 ~~~~~~ 84 (108)
T 4hwn_A 79 AATEDN 84 (108)
T ss_dssp EECTTS
T ss_pred EEeCCC
Confidence 999765
No 298
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.15 E-value=3.5e-10 Score=79.99 Aligned_cols=94 Identities=23% Similarity=0.371 Sum_probs=68.2
Q ss_pred eEEecCCcEEEEEEEec-cCCC--eeEEEeCCEECCCCCeEEEecCCEEEEEEccC---CCCCCeE--EEEEEEeCCcce
Q psy12421 67 RVMQVRQTCKLLCCLSG-KPPP--TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDC---KPEDSGE--YKCVATNKHGTD 138 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g-~p~p--~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~G~--Y~C~a~n~~g~~ 138 (168)
..+.+|+.+.|.|.+.| .|.| .+.|++++..+.. .+...+. .+.+... ...|.|. |+|.+.|..|..
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~---~~~~~~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~ 87 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP---TVTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQ 87 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC---EEEECSS--EEEEEEEEEECGGGCEEEEEEEEEEETTEEE
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc---eEeeCCC--eEEEEeecccccccCCcceEEEEEecCCCCc
Confidence 47889999999999998 7777 9999999998765 2233333 4444444 6778775 999999999998
Q ss_pred EEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 139 ETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 139 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
.....|.|...|.+... .....+.+|+
T Consensus 88 ~~~~~l~V~~~p~p~~~--~~~~~v~~G~ 114 (265)
T 2oz4_A 88 ETLQTVTIYSFPAPNVI--LTKPEVSEGT 114 (265)
T ss_dssp EEEEEEEEECCCCCEEE--ESCSEEETTC
T ss_pred EEEEEEEEeCCCCceee--cCCceecCCC
Confidence 88889998765542222 3344455564
No 299
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.15 E-value=1.4e-10 Score=83.47 Aligned_cols=96 Identities=13% Similarity=0.139 Sum_probs=63.9
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCC------eeEEEeCC--EECC-------------CCCeEEEecCCEEEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPP------TVKWYKGN--RELS-------------KRDYSMSYSDGVVSME 115 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p------~i~W~~~~--~~~~-------------~~~~~~~~~~~~~~l~ 115 (168)
++.+...+....+.+|+++.|.|.+.+.+.+ .+.|+++. ..+. ..++..........|.
T Consensus 159 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 238 (291)
T 2gki_A 159 DLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLT 238 (291)
T ss_dssp CCCEECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred cceEEcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEE
Confidence 3455555666789999999999999988765 89999963 2110 2233333344455799
Q ss_pred EccCCCCCCeEEEEEEEeCCcceEE-EEEEEEeeCCCc
Q psy12421 116 IIDCKPEDSGEYKCVATNKHGTDET-NCVVIVESEEES 152 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p~~ 152 (168)
|.+++.+|+|.|.|.+.|....... ...|.|+..+..
T Consensus 239 I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v~~~~~~ 276 (291)
T 2gki_A 239 ISSVQAEDLAVYYCKQSYYHMYTFGSGTKLEIKHHHHH 276 (291)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC---
T ss_pred ECCCCHHHCEEEEEEEccCCceEEcCCEEEEEEeeEcC
Confidence 9999999999999999985432221 234555554433
No 300
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.15 E-value=2.3e-10 Score=70.50 Aligned_cols=75 Identities=24% Similarity=0.322 Sum_probs=55.7
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-----ECC----------CCCeEEEecCCEEEEEEccCCCCCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-----ELS----------KRDYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-----~~~----------~~~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
+...+....+.+|+++.|.|.+.+.+.+.+.|++... .+. ..++......+...|.|.+++.+|+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 83 (108)
T 1qfw_M 4 LTQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDF 83 (108)
T ss_dssp EEEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCC
T ss_pred EEEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhC
Confidence 4455667888999999999999888888999998531 110 1233322233456799999999999
Q ss_pred eEEEEEEEeC
Q psy12421 125 GEYKCVATNK 134 (168)
Q Consensus 125 G~Y~C~a~n~ 134 (168)
|.|.|.+.+.
T Consensus 84 G~Y~C~~~~~ 93 (108)
T 1qfw_M 84 ADYHCGQTYN 93 (108)
T ss_dssp SEEEEEECSS
T ss_pred EEEEEEEccC
Confidence 9999999875
No 301
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.15 E-value=4.1e-11 Score=82.32 Aligned_cols=82 Identities=15% Similarity=0.052 Sum_probs=56.3
Q ss_pred cCCeEEecC--CcEEEEEEEeccCCCeeEEEeC---CEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcce
Q psy12421 64 LRPRVMQVR--QTCKLLCCLSGKPPPTVKWYKG---NRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 64 ~~~~~~~~g--~~~~l~C~~~g~p~p~i~W~~~---~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 138 (168)
+....+.+| +.+.|.|.+.+ |.+.+.|+++ +..+...........+ .|.|.+++.+|+|.|.|.|.|..+..
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~--~l~I~~v~~~D~G~Y~C~a~n~~~~~ 90 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK--GFTIPSYMISYAGMVFCEAKINDESY 90 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT--EEEEEGGGTTTCSEEEEEEC----CE
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc--cEEEccCChhcCceEEEEEEECCeeE
Confidence 355778899 99999999976 7899999884 6665543322222334 69999999999999999999854443
Q ss_pred EE-EEEEEEee
Q psy12421 139 ET-NCVVIVES 148 (168)
Q Consensus 139 ~~-~~~l~v~~ 148 (168)
.. .+.|.|..
T Consensus 91 ~s~~~~l~v~~ 101 (213)
T 2x1w_L 91 QSIMYIVVVVG 101 (213)
T ss_dssp ECCCEEEEECB
T ss_pred EEEEEEEEEeC
Confidence 32 25565543
No 302
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.14 E-value=3.8e-11 Score=83.42 Aligned_cols=135 Identities=13% Similarity=0.065 Sum_probs=73.8
Q ss_pred CceeEEEEeCCCCCCCCCCcccce---eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-eeE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQV---RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-TVK 90 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~ 90 (168)
.|.+.+++..|.+. |.|..... .......+.+.. ....+|.+........+..|+.+.|.|.+.|. |.| .+.
T Consensus 80 sL~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~L~V~~-~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 156 (227)
T 1mju_H 80 YMQLSSLTSDDSAV--YYCANKLGWFPYWGQGTLVTVSA-AKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLT 156 (227)
T ss_dssp EEEECSCCGGGCEE--EEEEEEETTEEEECCCEEEEECS-SCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEE
T ss_pred EEEECCCCcccCEE--EEEEECCCCceEEcCcEEEEEcC-CCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEE
Confidence 46667777788666 43322211 011122222221 11235666544333445679999999999985 776 999
Q ss_pred EEeCCEECCCC-CeEEEecC---CEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCchh
Q psy12421 91 WYKGNRELSKR-DYSMSYSD---GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEESKE 154 (168)
Q Consensus 91 W~~~~~~~~~~-~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~ 154 (168)
|++++..+... .......+ ....|.|......| |.|+|.|.|..+.......+.+..+|..+.
T Consensus 157 W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~~ 223 (227)
T 1mju_H 157 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPC 223 (227)
T ss_dssp EGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC-----
T ss_pred EecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCCC
Confidence 99998754210 00011111 12358888888877 999999999887777777777766665544
No 303
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.14 E-value=3.6e-11 Score=82.51 Aligned_cols=123 Identities=15% Similarity=0.197 Sum_probs=74.2
Q ss_pred ceeEEEEeCCCCCCCCCCccccee-------ccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEec-cCCC-
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVR-------RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPP- 87 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p- 87 (168)
|.+.+++..|.|. |.|...... ......+.+. .....+|.+...........|+.+.|.|.+.| .|.|
T Consensus 77 L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~~~l~V~-~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~ 153 (218)
T 3s96_B 77 LSISNIQPEDEAI--YICGVGDTIKEQFVYVFGGGTKVTVL-GQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGV 153 (218)
T ss_dssp EEESSCCGGGCEE--EEEEEEEEETTEEEEEECCCEEEEEE-SCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCC
T ss_pred EEEccCCcccCEE--EEEEEecCCCCceeEEEcCcEEEEEe-cCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCe
Confidence 6677788888666 433332211 1122233332 12225677766555555556889999999998 5767
Q ss_pred eeEEEeCCEECCCCC--eEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 88 TVKWYKGNRELSKRD--YSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 88 ~i~W~~~~~~~~~~~--~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
.+.|++++..+.... ......++ ...|.|......|.|.|+|.|.|..+....++
T Consensus 154 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 154 TVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp EEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred EEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 899999999885421 00000111 12377777777889999999999987665443
No 304
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.14 E-value=5.1e-11 Score=87.98 Aligned_cols=118 Identities=13% Similarity=0.121 Sum_probs=80.8
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEe
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK 93 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~ 93 (168)
...|.+.+++..|.|. |.|....... ...+.+.. +...+ ...+.+|+.+.|.|.+.+.|.|.+.|++
T Consensus 66 ~~~L~I~~v~~~D~G~--Y~C~~~n~~~--~~~l~V~~--------~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~ 132 (363)
T 1wio_A 66 NFPLIIKNLKIEDSDT--YICEVEDQKE--EVQLLVFG--------LTANS-DTHLLQGQSLTLTLESPPGSSPSVQCRS 132 (363)
T ss_dssp CCCEEECSCCGGGCEE--EEEEETTEEE--EEEEEEEE--------EEESS-CSSEESBSCEEEEEECCTTCCCCEEEEC
T ss_pred eEEEEECCCCHHHCEE--EEEEEEECCC--cEEEEEEe--------CCCCC-ceEEecCCCEEEEEEcCCCCCCeEEEEc
Confidence 3457788888888666 4333322211 22222221 11222 2456799999999999999999999999
Q ss_pred CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCch
Q psy12421 94 GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
++..+ ..... .|.|.++...|+|.|+|.|.|..+.....+.|.|...|..+
T Consensus 133 ~~~~~-------~~~~~--~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~ 183 (363)
T 1wio_A 133 PRGKN-------IQGGK--TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS 183 (363)
T ss_dssp SSSCE-------EEESS--EEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSE
T ss_pred CCCcc-------cccce--EEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCC
Confidence 86432 12333 79999999999999999999987777777777777655443
No 305
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.14 E-value=3.2e-10 Score=71.77 Aligned_cols=87 Identities=15% Similarity=0.203 Sum_probs=61.5
Q ss_pred eecCCeEEecCCcEEEEEEEeccCC---CeeEEEeCCEE-----------CCC-------CCeEEEe---cCCEEEEEEc
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGKPP---PTVKWYKGNRE-----------LSK-------RDYSMSY---SDGVVSMEII 117 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~p~---p~i~W~~~~~~-----------~~~-------~~~~~~~---~~~~~~l~i~ 117 (168)
.........+|+++.|.|.+...+. ..+.|+|++.. ... .+..+.. ..+..+|.|.
T Consensus 10 ~~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~ 89 (125)
T 4gos_A 10 VTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK 89 (125)
T ss_dssp EEEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEES
T ss_pred ccCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEEC
Confidence 3444567788999999999864333 36899986431 100 1111111 1223479999
Q ss_pred cCCCCCCeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 118 DCKPEDSGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 118 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
+++.+|+|.|.|.+.|..|.....+.|.|--
T Consensus 90 ~v~~~D~G~Y~C~v~~~~g~~~~~v~LkVG~ 120 (125)
T 4gos_A 90 NVQLTDAGTYKCYIITSKGKGNANLEYKTGH 120 (125)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCChHHCEEEEEEEEeCCCeEEEEEEEEECC
Confidence 9999999999999999999999999998853
No 306
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.14 E-value=2.3e-11 Score=83.72 Aligned_cols=125 Identities=15% Similarity=0.147 Sum_probs=72.9
Q ss_pred CceeEEEEeCCCCCCCCCCccccee------ccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEec-cCCC-
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVR------RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPP- 87 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p- 87 (168)
.|.+.+++..|.+. |.|...... ......+.+.. ....+|.+........+..|+.+.|.|.+.| .|.|
T Consensus 80 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~ 156 (219)
T 1c1e_H 80 YLQINNLKNEDMAT--YFCARGTTIVRAMDYWGQGTSLTVSS-AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPV 156 (219)
T ss_dssp EEEECSCCGGGCEE--EEEEEEETTTTEEEEECCCEEEEECC-CCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCC
T ss_pred EEEECCCCcccCEE--EEEEEeccCcccceeecCceEEEEec-CCCCCCeEEEecCccccccCCeEEEEEEcccccCCCe
Confidence 46677788888666 433222110 11122222221 1123466655443444568999999999998 8998
Q ss_pred eeEEEeCCEECCCCC-eEEEecCC---EEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 88 TVKWYKGNRELSKRD-YSMSYSDG---VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 88 ~i~W~~~~~~~~~~~-~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
.+.|++++..+.... ......+. ...|.|.... .|.|.|+|.|.|..|.......|
T Consensus 157 ~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~-~d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 157 TVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSP-RPSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp EEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESSS-TTTSCCEEEEEEGGGTEEEEEEC
T ss_pred EEEEEeCCcccceEecCCcccCCeEEEEEEEEEeccc-CCCCEEEEEEEeCCCCccEEEec
Confidence 999999987542100 00111111 1257774444 46699999999998876555443
No 307
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.14 E-value=1.8e-09 Score=74.61 Aligned_cols=84 Identities=19% Similarity=0.314 Sum_probs=60.4
Q ss_pred CCeEEecCCcEEEEEEEeccCCC---eeEEEeCCEE-----------CCC-------CCeEEEe---cCCEEEEEEccCC
Q psy12421 65 RPRVMQVRQTCKLLCCLSGKPPP---TVKWYKGNRE-----------LSK-------RDYSMSY---SDGVVSMEIIDCK 120 (168)
Q Consensus 65 ~~~~~~~g~~~~l~C~~~g~p~p---~i~W~~~~~~-----------~~~-------~~~~~~~---~~~~~~l~i~~~~ 120 (168)
....+.+|+++.|.|.+.+.+.+ .+.|+|++.. +.. .+..... ..+..+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 34678899999999999876655 6899987532 110 1111111 2245689999999
Q ss_pred CCCCeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 121 PEDSGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
..|+|.|.|.|.|..|.....+.+.+..
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~ 119 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAA 119 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeecc
Confidence 9999999999999988877766665543
No 308
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.13 E-value=2.1e-10 Score=86.48 Aligned_cols=89 Identities=19% Similarity=0.324 Sum_probs=62.3
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeC--CEECC------------------CCCeEEEec--CCEEEEE
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKG--NRELS------------------KRDYSMSYS--DGVVSME 115 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~--~~~~~------------------~~~~~~~~~--~~~~~l~ 115 (168)
+...+....+.+|+.+.|.|.+.|.| .+.+.|+++ +..+. ..++.+... .+...|.
T Consensus 221 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 300 (438)
T 1qgc_4 221 MLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQ 300 (438)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEE
T ss_pred EEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEE
Confidence 33456677899999999999999988 679999986 43221 123333322 3355799
Q ss_pred EccCCCCCCeEEEEEEEeCCc-----ceEEEEEEEEee
Q psy12421 116 IIDCKPEDSGEYKCVATNKHG-----TDETNCVVIVES 148 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~ 148 (168)
|.++..+|+|.|.|.|.|..+ .......|.|..
T Consensus 301 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~ 338 (438)
T 1qgc_4 301 MSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSA 338 (438)
T ss_dssp ECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECS
T ss_pred ECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEec
Confidence 999999999999999998543 222334566653
No 309
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.13 E-value=2.9e-10 Score=77.68 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=60.3
Q ss_pred CeEEecCCcEEEEEEEeccCCCeeEEEeC--CEEC-------------CCCCeEEEecCCEEEEEEccCCCCCCeEEEEE
Q psy12421 66 PRVMQVRQTCKLLCCLSGKPPPTVKWYKG--NREL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCV 130 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~~--~~~~-------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 130 (168)
...+.+|+++.|.|.+. |.+.+.|+++ +..+ ...++......+..+|.|.+++.+|+|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 56788999999999987 8999999984 2211 11344444455566899999999999999999
Q ss_pred EEeCCc--ceEEEEEEEEe
Q psy12421 131 ATNKHG--TDETNCVVIVE 147 (168)
Q Consensus 131 a~n~~g--~~~~~~~l~v~ 147 (168)
+.|..| .......|.|.
T Consensus 87 ~~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp EEETTTEEEECCCEEEEEC
T ss_pred EecCCCceeECCCceEEEe
Confidence 999987 33445567666
No 310
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.12 E-value=1.3e-09 Score=75.54 Aligned_cols=92 Identities=18% Similarity=0.252 Sum_probs=66.9
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EE-----------C--CCCCeEEEecCCEEEEEEccCCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--RE-----------L--SKRDYSMSYSDGVVSMEIIDCKP 121 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~-----------~--~~~~~~~~~~~~~~~l~i~~~~~ 121 (168)
.+.+...+....+.+|+++.|.|.+.+.|.+.+.|+++. .. . ...++......+..+|.|.+++.
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 456666677789999999999999999999999999842 10 0 02344444455666899999999
Q ss_pred CCCeEEEEEEEeCCcce-EEEEEEEEee
Q psy12421 122 EDSGEYKCVATNKHGTD-ETNCVVIVES 148 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 148 (168)
+|+|.|.|.+.|..+.. .....|.|..
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 131 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKR 131 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEec
Confidence 99999999998876532 2233455543
No 311
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.12 E-value=4.4e-11 Score=81.83 Aligned_cols=121 Identities=13% Similarity=0.111 Sum_probs=73.6
Q ss_pred CceeEEEEeCCCCCCCCCCcccce-eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-eeEEE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQV-RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-TVKWY 92 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~W~ 92 (168)
.|.+.+++..|.|. |.|..... .......+.+.. ....+|.+........+..|+.+.|.|.+.|. |.| .+.|+
T Consensus 79 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~l~V~~-~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 155 (210)
T 3d9a_H 79 YLDLNSVTTEDTAT--YYCANWDGDYWGQGTLVTVSA-AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 155 (210)
T ss_dssp EEEECSCCGGGCEE--EEEEETTSSCBCCCEEEEECC-CCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred EEEECCCCcccCEE--EEEEEecCcccccceEEEecc-CCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEe
Confidence 56677888888666 43332211 011112222221 12245666654433445789999999999987 888 99999
Q ss_pred eCCEECCCC-CeEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEE
Q psy12421 93 KGNRELSKR-DYSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETN 141 (168)
Q Consensus 93 ~~~~~~~~~-~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 141 (168)
+++..+... ..... .++ ...|.|......| |.|+|.|.|..|.....
T Consensus 156 ~~~~~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 156 SGSLSSGVHTFPAVL-QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp GGTBCTTEEECCCEE-ETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred eCCcccceEEcCCcc-CCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 988754210 00111 112 2358888888766 99999999999876543
No 312
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.12 E-value=5.9e-10 Score=78.68 Aligned_cols=88 Identities=25% Similarity=0.369 Sum_probs=61.8
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC-----------------CCCCeEEEe--cCCEEEEEEccC
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL-----------------SKRDYSMSY--SDGVVSMEIIDC 119 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~-----------------~~~~~~~~~--~~~~~~l~i~~~ 119 (168)
.+....+.+|+++.|.|.+.|.| .+.+.|+++. ..+ ...++.+.. ..+..+|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (257)
T 1f3r_B 6 ESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSL 85 (257)
T ss_dssp EECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESC
T ss_pred CCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCC
Confidence 34456788999999999999875 7899999852 111 012343333 244568999999
Q ss_pred CCCCCeEEEEEEEeCCc-------ce--EEEEEEEEeeCC
Q psy12421 120 KPEDSGEYKCVATNKHG-------TD--ETNCVVIVESEE 150 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~~g-------~~--~~~~~l~v~~~p 150 (168)
+.+|+|.|.|.+.|..| .. .....|.|...+
T Consensus 86 ~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~ 125 (257)
T 1f3r_B 86 QTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGG 125 (257)
T ss_dssp CTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSC
T ss_pred CcccCEEEEEEEcccccCccccccccccCCceEEEEEeCC
Confidence 99999999999999864 11 123467776543
No 313
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.12 E-value=2e-10 Score=81.92 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=55.7
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC------------------CCCCeEEEec--CCEEEEE
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL------------------SKRDYSMSYS--DGVVSME 115 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~------------------~~~~~~~~~~--~~~~~l~ 115 (168)
+...+....+.+|+++.|.|.+.+.+ .+.+.|++++ ..+ ...++.+... .....|.
T Consensus 137 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 216 (276)
T 3auv_A 137 QLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQ 216 (276)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred EEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEE
Confidence 34456678899999999999999876 5899999963 111 0123333321 3445799
Q ss_pred EccCCCCCCeEEEEEEEeC
Q psy12421 116 IIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~ 134 (168)
|.+++.+|+|.|.|.|.|.
T Consensus 217 I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 217 MNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp ECSCCGGGCEEEEEEEECS
T ss_pred ECCCChhHCEEEEEEEEcC
Confidence 9999999999999999997
No 314
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.12 E-value=8.4e-11 Score=79.27 Aligned_cols=70 Identities=26% Similarity=0.397 Sum_probs=56.0
Q ss_pred EEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEcc-CCCCCCeEEEEEEEeCCcceEEEEEEEE
Q psy12421 68 VMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIID-CKPEDSGEYKCVATNKHGTDETNCVVIV 146 (168)
Q Consensus 68 ~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 146 (168)
....|+.+.|.|.+.+ +. .+.|+|++..+... .++ .|.|.+ +...|+|.|+|.|.|..|.....+.+.|
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~------~~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v 79 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK------HDK--HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARV 79 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSC------CCS--EEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC------CCC--EEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 4467999999999887 44 49999999887653 122 799999 9999999999999999998665555554
Q ss_pred e
Q psy12421 147 E 147 (168)
Q Consensus 147 ~ 147 (168)
.
T Consensus 80 ~ 80 (186)
T 1jbj_A 80 G 80 (186)
T ss_dssp C
T ss_pred e
Confidence 3
No 315
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.12 E-value=1.7e-10 Score=81.89 Aligned_cols=110 Identities=11% Similarity=0.102 Sum_probs=71.4
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeE--EEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYS--MSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
.+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|+|++..+...... .........|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 4567765554 67889999999999864 57899999988644211000 00011234799999999999999999986
Q ss_pred CCc-----ceEEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 134 KHG-----TDETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 134 ~~g-----~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
..+ .....+.|.|.+....+.....+...+.+|+
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~ 122 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGE 122 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTC
T ss_pred cCCCccccccCCCEEEecccCCCCcceEccCCCccCCCC
Confidence 432 2244567777765433333333444677775
No 316
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.12 E-value=2.3e-10 Score=78.18 Aligned_cols=129 Identities=12% Similarity=0.109 Sum_probs=78.5
Q ss_pred CCceeEEEEeCCCCCCCCCCcccceeccCc-ceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEE-eccCCCeeEEE
Q psy12421 15 QDNPRLRTRAIPKTIPAYVPEVQQVRRREP-LQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCL-SGKPPPTVKWY 92 (168)
Q Consensus 15 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~ 92 (168)
..|.+.+++..|.|. |.|. +.+... .........+..+|.+...+.......+....+.|.+ .+.|++.+.|+
T Consensus 83 ~sL~I~~v~~~D~G~--Y~C~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~ 157 (225)
T 4fmk_A 83 ATLAFRGLRVEDEGN--YTCE---FATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWI 157 (225)
T ss_dssp CCEEECSCCGGGCEE--EEEE---EEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEE
T ss_pred EEEEEccCCHHHCcc--eEEE---EEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEE
Confidence 347788888888666 4332 222211 1222222233445665555555566667777777765 46888999999
Q ss_pred eCCEECCCCCeEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEE--EEEEEEee
Q psy12421 93 KGNRELSKRDYSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDET--NCVVIVES 148 (168)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~v~~ 148 (168)
+++.............++ .+.|.|..+...|+|.|+|.|.|..|.... ++.|.|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 158 SSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp CSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred ECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 886543221111111222 235999999999999999999999887644 44454544
No 317
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.11 E-value=1.4e-10 Score=71.24 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=56.1
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 135 (168)
+|.+...+.. .+.+|++++|.|.+.+. ...+.|+|++..+.... .........|.|.+++..|+|.|.|.+.|..
T Consensus 5 kP~i~~~p~~-~v~~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~~~--~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~~ 79 (105)
T 2vsd_A 5 QPSLSLHPSQ-GVSLGDTVTLRCHLPRM-AAWVQLWLNGTLRFDKE--KDKEQDAAEFSFAVTNLEDAGTYQCRYQVSE 79 (105)
T ss_dssp CCEEEEESCS-SCCTTCEEEEEEECCSS-CEEEEEEETTEEEEEEE--ECTTCSEEEEEEECCSGGGCEEEEEEEEEET
T ss_pred CCEEEeCCCC-CcCcCCCEEEEEEcCCC-CcEEEEEECCccceeee--ccCCCCEEEEEECCCCHHHCeEEEEEEEcCC
Confidence 5777766655 68899999999998765 46788999987543211 1112334579999999999999999999864
No 318
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.11 E-value=7.7e-11 Score=83.26 Aligned_cols=93 Identities=14% Similarity=0.225 Sum_probs=53.0
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EEC------C--C----------CCeEEE--ecCCEEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--REL------S--K----------RDYSMS--YSDGVVSM 114 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~------~--~----------~~~~~~--~~~~~~~l 114 (168)
+|.+...+....+.+|++++|.|.+.+.+.+.+.|++.. ..+ . . .++... ...+..+|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 456666777889999999999999999999999999831 110 0 0 011111 11223369
Q ss_pred EEccCCCCCCeEEEEEEEeCCcc---eEEEEEEEEeeC
Q psy12421 115 EIIDCKPEDSGEYKCVATNKHGT---DETNCVVIVESE 149 (168)
Q Consensus 115 ~i~~~~~~d~G~Y~C~a~n~~g~---~~~~~~l~v~~~ 149 (168)
.|.+++.+|+|.|.|.+.|..+. ......|.|...
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 119 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDK 119 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC-
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecC
Confidence 99999999999999999998662 233445666654
No 319
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.11 E-value=6.3e-10 Score=69.01 Aligned_cols=76 Identities=21% Similarity=0.392 Sum_probs=55.5
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EE---C--------CCCCeEEEe---cCCEEEEEEccCCCCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--RE---L--------SKRDYSMSY---SDGVVSMEIIDCKPED 123 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~---~--------~~~~~~~~~---~~~~~~l~i~~~~~~d 123 (168)
+...+....+.+|+++.|.|.+.+.+ +.+.|+++. .. + ...++.+.. ..+..+|.|.+++.+|
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 82 (113)
T 1h5b_A 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLED 82 (113)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGG
T ss_pred eEECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhh
Confidence 34456667889999999999998754 789999853 11 1 112333322 2345679999999999
Q ss_pred CeEEEEEEEeCCc
Q psy12421 124 SGEYKCVATNKHG 136 (168)
Q Consensus 124 ~G~Y~C~a~n~~g 136 (168)
+|.|.|.+.|..|
T Consensus 83 sG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 83 SGTYFCAAEASSG 95 (113)
T ss_dssp CEEEEEEEECSSS
T ss_pred CEEEEEEEecCCC
Confidence 9999999999765
No 320
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.11 E-value=1.1e-09 Score=67.81 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=61.8
Q ss_pred ecCCeEEecCCcEEEEEEEeccCC-CeeEEEeCCE-----EC-C---------CCCeEEE--ecCCEEEEEEccCCCCCC
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPP-PTVKWYKGNR-----EL-S---------KRDYSMS--YSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~~~~~-----~~-~---------~~~~~~~--~~~~~~~l~i~~~~~~d~ 124 (168)
.+....+.+|+++.|.|...+... ..+.|++... .+ . ..++.+. ...+..+|.|.+++.+|+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~Ds 86 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDA 86 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHC
Confidence 344567889999999999986543 3699998642 11 0 1223332 134456899999999999
Q ss_pred eEEEEEEEeCCcceEEEEEEEEeeCC
Q psy12421 125 GEYKCVATNKHGTDETNCVVIVESEE 150 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~l~v~~~p 150 (168)
|.|.|.+.+........+.|.|...|
T Consensus 87 G~Y~C~v~~~~~~~~~~v~L~V~~~p 112 (113)
T 1zox_A 87 GIYWCGITKGGLDPMFKVTVNIGPVP 112 (113)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEECC-
T ss_pred EEEEEeeEcCCCCccEEEEEEEEcCC
Confidence 99999999875556677788876543
No 321
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.11 E-value=3.8e-11 Score=85.76 Aligned_cols=80 Identities=23% Similarity=0.364 Sum_probs=55.4
Q ss_pred ecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCC--EEEEEEccCCCCCCeEEEEEEEeCCcc---
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDG--VVSMEIIDCKPEDSGEYKCVATNKHGT--- 137 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~a~n~~g~--- 137 (168)
...+..+.+|+++.|.|.+.+. +.|++++..+.. . ......+ ...|.|.++...|+|.|+|.|.|..|.
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~-~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 79 (289)
T 3mjg_X 6 PGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ-E-MAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETD 79 (289)
T ss_dssp SCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE-E-EEECTTSCEEEEEEECSCCGGGCEEEEEECCC------C
T ss_pred CCCeEEEeCCCcEEEEEeccce----EEEECCCCCccc-c-eeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcC
Confidence 3445678899999999998874 999999987632 1 1121222 357999999999999999999999876
Q ss_pred eEEEEEEEEee
Q psy12421 138 DETNCVVIVES 148 (168)
Q Consensus 138 ~~~~~~l~v~~ 148 (168)
....+.|.|..
T Consensus 80 ~~~~~~v~v~~ 90 (289)
T 3mjg_X 80 ERKRLYIFVPD 90 (289)
T ss_dssp CCEEEEEECCC
T ss_pred cEEeEEEEEEC
Confidence 34455555553
No 322
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.10 E-value=7.9e-10 Score=69.99 Aligned_cols=92 Identities=16% Similarity=0.229 Sum_probs=63.7
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccC----CCeeEEEeCC--EE---C----------CCCCeEEEecCCEEEEEEccC
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKP----PPTVKWYKGN--RE---L----------SKRDYSMSYSDGVVSMEIIDC 119 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p----~p~i~W~~~~--~~---~----------~~~~~~~~~~~~~~~l~i~~~ 119 (168)
.+...+....+.+|++++|.|.+.+.+ .+.+.|++.. .. + ...++.........+|.|.++
T Consensus 3 ~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v 82 (126)
T 4ffy_L 3 VLTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSV 82 (126)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSC
T ss_pred cEEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCC
Confidence 455566678899999999999998876 5679999852 11 1 013344444455668999999
Q ss_pred CCCCCeEEEEEEEeCCcceE-EEEEEEEeeCC
Q psy12421 120 KPEDSGEYKCVATNKHGTDE-TNCVVIVESEE 150 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~p 150 (168)
+.+|+|.|.|.+.+...... ....|.|...+
T Consensus 83 ~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~g 114 (126)
T 4ffy_L 83 ETDDAATYYCQQNNEDPYTFGGGTKLEIKGGG 114 (126)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEEC--
T ss_pred CHHHCEEEEEEEecCCCcEECCCEEEEEecCC
Confidence 99999999999988643322 23466666543
No 323
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.10 E-value=9.8e-11 Score=88.29 Aligned_cols=123 Identities=15% Similarity=0.192 Sum_probs=76.5
Q ss_pred CceeEEEEeCCCCCCCCCCcccceec---cCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEec-cCCC-eeE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRR---REPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPP-TVK 90 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p-~i~ 90 (168)
.|.+.+++..|.|. |.|....... .....+.+ .....+|.+...........|..+.|.|.+.| .|.| .+.
T Consensus 76 ~L~I~~v~~~D~G~--Y~C~a~n~~~~~~~~~~~l~V--~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~ 151 (438)
T 1qgc_4 76 TLTIDPVEADDVAT--YYCQQSNEVPLTFGAGTKLDL--KRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVK 151 (438)
T ss_dssp EEEESSCCGGGCEE--EEEEECSSTTCCBCCCEEEEE--CCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEE
T ss_pred EEEeCCCcCcCCee--EEEEEecCCCccccCceeEEe--cCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEE
Confidence 36677777788665 4322211110 11122222 22234677765444433446889999999987 6777 899
Q ss_pred EEeCCEECCCCCeE-EEe---cCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 91 WYKGNRELSKRDYS-MSY---SDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 91 W~~~~~~~~~~~~~-~~~---~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
|++++..+...... ... .++ ...|.|.++...|+|.|+|.|.|..|......
T Consensus 152 W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 211 (438)
T 1qgc_4 152 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVK 211 (438)
T ss_dssp EEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEE
T ss_pred EEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceec
Confidence 99999887654111 000 111 23689999999999999999999988754333
No 324
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.10 E-value=7.6e-11 Score=81.41 Aligned_cols=90 Identities=20% Similarity=0.327 Sum_probs=66.6
Q ss_pred ecCCeEEecCCcEEEEEEEeccCC-CeeEEEeCCEECC----------CCCe--EE-----------EecCCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPP-PTVKWYKGNRELS----------KRDY--SM-----------SYSDGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~~~~~~~~----------~~~~--~~-----------~~~~~~~~l~i~~ 118 (168)
.+....+.+|+.+.|.|.+.+.|. +.+.|++++.... ...+ .+ ...++ .|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~--~L~i~~ 83 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG--RLVLAE 83 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC--CEEESS
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc--eEEEcc
Confidence 344567889999999999999885 8999997643211 0000 11 12233 499999
Q ss_pred CCCCCCeEEEEEEEeCC-cceEEEEEEEEeeCCCchh
Q psy12421 119 CKPEDSGEYKCVATNKH-GTDETNCVVIVESEEESKE 154 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~-g~~~~~~~l~v~~~p~~~~ 154 (168)
++..|+|.|.|.+.|.. |.....+.|.|..+|..+.
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~ 120 (231)
T 2pet_A 84 AQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATE 120 (231)
T ss_dssp CCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCE
T ss_pred cCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcE
Confidence 99999999999999987 7778888899988776544
No 325
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.10 E-value=3e-12 Score=87.68 Aligned_cols=84 Identities=14% Similarity=0.214 Sum_probs=59.4
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEecc-CC-CeeEEEeCCEECCCCCeE---EEecCC---EEEEEEccCCCCCCeE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PP-PTVKWYKGNRELSKRDYS---MSYSDG---VVSMEIIDCKPEDSGE 126 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~~~~~~~~~~~~~---~~~~~~---~~~l~i~~~~~~d~G~ 126 (168)
..+|.+........+..|+.+.|.|.+.|. |. |.+.|++++..+...... ....++ ...|.|.++...|+|.
T Consensus 111 ~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 190 (212)
T 1nfd_E 111 KSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNR 190 (212)
T ss_dssp CBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSC
T ss_pred CCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCe
Confidence 356777654444445579999999999987 54 799999999887542110 000111 1248888999999999
Q ss_pred EEEEEEeCCcce
Q psy12421 127 YKCVATNKHGTD 138 (168)
Q Consensus 127 Y~C~a~n~~g~~ 138 (168)
|+|.|.|..+..
T Consensus 191 Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 191 VSCQVTHEGETV 202 (212)
T ss_dssp EEEEEECTTTTC
T ss_pred EEEEEEeCCceE
Confidence 999999987763
No 326
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.10 E-value=1.6e-09 Score=67.06 Aligned_cols=75 Identities=24% Similarity=0.426 Sum_probs=55.7
Q ss_pred EEeecCCeEEecCCcEEEEEEEecc--CCCeeEEEeCC--E----ECC-CCCeEEEe--cCCEEEEEEccCCCCCCeEEE
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKGN--R----ELS-KRDYSMSY--SDGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~--~----~~~-~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~ 128 (168)
+...+....+.+|+++.|.|.+.+. +.+.+.|+++. . .+. ..++.... ......|.|.+++.+|+|.|.
T Consensus 3 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 82 (111)
T 2ywz_A 3 VDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYK 82 (111)
T ss_dssp EEEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred eEECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEE
Confidence 4456667889999999999999876 57899999852 2 121 13343322 234568999999999999999
Q ss_pred EEEEeC
Q psy12421 129 CVATNK 134 (168)
Q Consensus 129 C~a~n~ 134 (168)
|.+.|.
T Consensus 83 C~~~~~ 88 (111)
T 2ywz_A 83 CQADYS 88 (111)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999983
No 327
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=1.6e-09 Score=69.34 Aligned_cols=94 Identities=18% Similarity=0.347 Sum_probs=62.9
Q ss_pred eEEeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCCEE----CC--C----CCeEEE-----ecCCEEEEEEccCCCC
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGNRE----LS--K----RDYSMS-----YSDGVVSMEIIDCKPE 122 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~~~----~~--~----~~~~~~-----~~~~~~~l~i~~~~~~ 122 (168)
.+...+....+.+|++++|.|.+.+. +.+.+.||++... +. . .++... .......|.|.+++.+
T Consensus 10 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 89 (136)
T 2d9c_A 10 QVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPA 89 (136)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTT
T ss_pred EEEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHH
Confidence 34445566788999999999999875 5678999997621 10 0 011100 0112347999999999
Q ss_pred CCeEEEEEEEeCCcc--eE----EEEEEEEeeCCCc
Q psy12421 123 DSGEYKCVATNKHGT--DE----TNCVVIVESEEES 152 (168)
Q Consensus 123 d~G~Y~C~a~n~~g~--~~----~~~~l~v~~~p~~ 152 (168)
|+|.|.|.+.+..+. .. ....|.|...|..
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s~ 125 (136)
T 2d9c_A 90 DAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSA 125 (136)
T ss_dssp TCEEEEEEEEECCSSSCEEEEECCCEEEEEECCCCC
T ss_pred HCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCCCC
Confidence 999999999886431 11 3467888776644
No 328
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.09 E-value=2e-10 Score=77.44 Aligned_cols=106 Identities=16% Similarity=0.226 Sum_probs=66.9
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccceeccCc-------ceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCC
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQVRRREP-------LQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPP 86 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 86 (168)
...|.+.+++..|.|. |.+. +.+... +.+.+. ....+|.+.. .+..+.|.|.+.+.|.
T Consensus 65 ngsL~I~~v~~~DsG~--Y~c~---~~n~~g~~~~~~~~~L~V~--~~~~~P~i~~--------~~~~v~L~C~~~~~p~ 129 (182)
T 1hnf_A 65 NGTLKIKHLKTDDQDI--YKVS---IYDTKGKNVLEKIFDLKIQ--ERVSKPKISW--------TCINTTLTCEVMNGTD 129 (182)
T ss_dssp TSCEEECSCCGGGCEE--EEEE---EEETTSCEEEEEEEEEEEE--CCCCCCEEEE--------ETTTTEEEEECSSCSS
T ss_pred CCCEEECCCChhhCEE--EEEE---EEeCCCceeEEEEEEEEEc--CcCCCCEEEE--------ccCcEEEEeEccCCCC
Confidence 4467788888888666 4222 222211 112221 1123444433 2347899999999999
Q ss_pred CeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 87 PTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 87 p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
|.+.|++++..+.. ... .+.+. ....|+|.|+|.|.|..|.......+
T Consensus 130 ~~~~W~~~g~~l~~-------~~~--~i~~~-~~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 130 PELNLYQDGKHLKL-------SQR--VITHK-WTTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp CEEEEEESSCEEEE-------ESS--CEEEE-CCSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred CEEEEEECCEECCC-------CCc--EEEEe-cccCCCcEEEEEEEeCCCCcEEccee
Confidence 99999999877611 111 23332 24789999999999999988776655
No 329
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.09 E-value=6e-11 Score=82.31 Aligned_cols=122 Identities=13% Similarity=0.132 Sum_probs=75.4
Q ss_pred ceeEEEEeCCCCCCCCCCccccee---ccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEec-cC-CCeeEE
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVR---RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KP-PPTVKW 91 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p-~p~i~W 91 (168)
+.+.+++..|.|. |.|...... ......+.+. ....+|.+........+..|+.+.|.|.+.| .| .+.+.|
T Consensus 96 L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~l~V~--~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W 171 (237)
T 3sob_L 96 LTISSLQPEDFAT--YYCQQSYTTPPTFGQGTKVEIK--RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQW 171 (237)
T ss_dssp EEESSCCGGGCEE--EEEEECSSSSCEECCCEEEEEE--CCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEE
T ss_pred EEECCCChhhCeE--EEEeeccCCceEEcCcEEEEEe--cCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEE
Confidence 5566777778665 432221111 1111222222 2356777766555555556889999999988 44 589999
Q ss_pred EeCCEECCCCC-e--EE-EecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 92 YKGNRELSKRD-Y--SM-SYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 92 ~~~~~~~~~~~-~--~~-~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
++++..+.... . .. ...++ ...|.|......|.|.|+|.|.|.........
T Consensus 172 ~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 230 (237)
T 3sob_L 172 KVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK 230 (237)
T ss_dssp EETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEE
T ss_pred EECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceee
Confidence 99999876421 0 00 00111 23588888888999999999999876544333
No 330
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.09 E-value=9.6e-10 Score=77.53 Aligned_cols=91 Identities=18% Similarity=0.215 Sum_probs=63.9
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EEC--------------CCCCeEE--EecCCEEEEEEccC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--REL--------------SKRDYSM--SYSDGVVSMEIIDC 119 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~--------------~~~~~~~--~~~~~~~~l~i~~~ 119 (168)
..+...+....+.+|+++.|.|.+.+.|.+.+.|++.. ..+ ...++.+ ....+..+|.|.++
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 34555666788999999999999999999999999842 100 0122222 12344567999999
Q ss_pred CCCCCeEEEEEEEeCCcce----EEEEEEEEee
Q psy12421 120 KPEDSGEYKCVATNKHGTD----ETNCVVIVES 148 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~~g~~----~~~~~l~v~~ 148 (168)
+.+|+|.|.|.+.|..+.. .....|.|..
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeC
Confidence 9999999999999976532 1233566654
No 331
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.09 E-value=7.2e-10 Score=78.00 Aligned_cols=73 Identities=18% Similarity=0.340 Sum_probs=53.5
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeC--CEEC------------------CCCCeEEEec--CCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKG--NREL------------------SKRDYSMSYS--DGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~--~~~~------------------~~~~~~~~~~--~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++ +..+ ...++.+... .....|.|.+
T Consensus 140 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 219 (256)
T 3ux9_B 140 ESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNS 219 (256)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECC
Confidence 44456688999999999999876 789999986 2211 0113333322 3455799999
Q ss_pred CCCCCCeEEEEEEEeCC
Q psy12421 119 CKPEDSGEYKCVATNKH 135 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~ 135 (168)
++.+|+|.|.|.+.|..
T Consensus 220 v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 220 LRAEDTAVYYCARYIDF 236 (256)
T ss_dssp CCGGGCEEEEEEEEETT
T ss_pred CChhhCEEEEEEEEcCC
Confidence 99999999999999963
No 332
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.09 E-value=3.2e-10 Score=76.85 Aligned_cols=86 Identities=12% Similarity=0.167 Sum_probs=63.9
Q ss_pred cCCeEEecCCcEEEEEEEec-cCCCeeEEEeCCEECC---C----------------CCeEEEecCCEEEEEEccCCCCC
Q psy12421 64 LRPRVMQVRQTCKLLCCLSG-KPPPTVKWYKGNRELS---K----------------RDYSMSYSDGVVSMEIIDCKPED 123 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g-~p~p~i~W~~~~~~~~---~----------------~~~~~~~~~~~~~l~i~~~~~~d 123 (168)
+....+.+|+++.|.|.+.+ .+.+.+.|++++..+. . .+..+ ..++ +|.|.+++.+|
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~-~~~~--sL~I~~v~~~D 81 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNF-TQSY--SLQLSNLKMED 81 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEE-CTTC--CEEECSCCGGG
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEE-CCCe--EEEECCCCccc
Confidence 34567889999999999875 5567999999876431 1 01111 1233 79999999999
Q ss_pred CeEEEEEEEeCCcceEEEEEEEEeeCCCc
Q psy12421 124 SGEYKCVATNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 124 ~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 152 (168)
+|.|.|.+.|..|.....+.|.|..++..
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~ 110 (193)
T 2if7_A 82 TGSYRAQISTKTSAKLSSYTLRILRQLRN 110 (193)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCCEE
T ss_pred CceEEEEEEecCCCeEEEEEEEEEccCCC
Confidence 99999999999887777788888765443
No 333
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.09 E-value=3.8e-11 Score=86.58 Aligned_cols=130 Identities=11% Similarity=0.085 Sum_probs=77.6
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccC-cceeeEeeecccCCCeE--EeecCCeEEecCCcEEEEEEE-eccCCCeeEE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRRE-PLQITFWQETVESAPNF--TFLLRPRVMQVRQTCKLLCCL-SGKPPPTVKW 91 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~--~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W 91 (168)
.|.+.+++..|.|. |.|. +.+.. ..........+..+|.+ ...+.......|+.+.|.|.+ .|.|.|.+.|
T Consensus 75 sL~I~~v~~~D~G~--Y~C~---a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W 149 (308)
T 4fom_A 75 TITLHNIGFSDSGK--YICK---AVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDW 149 (308)
T ss_dssp CEEECSCCGGGCEE--EEEE---EEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEE
T ss_pred EEEEccCCHHHCEE--EEEE---EeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEE
Confidence 47778888888666 4332 22211 11111111122223332 233444555568899999975 6899999999
Q ss_pred EeCCEECCCCCeEEEe--cCCEEEEEEccCCCCCCeEEEEEEEeCCcceE--EEEEEEEeeCC
Q psy12421 92 YKGNRELSKRDYSMSY--SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE--TNCVVIVESEE 150 (168)
Q Consensus 92 ~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~v~~~p 150 (168)
++++..+......... ......|.|......|.|.|+|.|.|..|... .++.|.|..+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P 212 (308)
T 4fom_A 150 EGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAP 212 (308)
T ss_dssp CCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEE
T ss_pred EECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCC
Confidence 9998766432111000 00123589999999999999999999877644 44455555544
No 334
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.09 E-value=6.8e-10 Score=74.14 Aligned_cols=90 Identities=18% Similarity=0.326 Sum_probs=62.1
Q ss_pred eEEecCCcEEEEEEEeccCCC--eeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 67 RVMQVRQTCKLLCCLSGKPPP--TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
..+.+|+.+.|.|.+.+.|.| .+.|++++..+..... ......|.|. +..|+|.|+|.+.|. ......|
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~----~~~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~l 78 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDAL----PGQKTEFKVD--SDDQWGEYSCVFLPE---PMGTANI 78 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTC----CCSEEEEEEC--GGGCCEEEEEEEEST---TSCEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccc----cCCcEEEEEe--chhhCeEEEEEEECC---cCcEEEE
Confidence 467789999999999988877 8999999987765331 1222346555 688999999999983 2356677
Q ss_pred EEeeCCCchhhhhhhhhcccCCC
Q psy12421 145 IVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 145 ~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
.|..+|...... ....+.+|+
T Consensus 79 ~V~~~P~~~~~~--~~~~~~~g~ 99 (184)
T 3b5h_A 79 QLHGPPRVKAVK--SSEHINEGE 99 (184)
T ss_dssp EECCSCCCEESC--SEEEECTTS
T ss_pred EEecCCceeecC--CCcEEcCCC
Confidence 777766543322 222455554
No 335
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.08 E-value=5.4e-10 Score=78.16 Aligned_cols=87 Identities=22% Similarity=0.353 Sum_probs=61.1
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC------------------CCCCeEEEe--cCCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL------------------SKRDYSMSY--SDGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~------------------~~~~~~~~~--~~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.| .+.+.|+++. ..+ ...++.+.. ..+..+|.|.+
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 87 (247)
T 2ghw_B 8 QSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNS 87 (247)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred ecCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECc
Confidence 33567889999999999999987 6889999842 100 113343333 23456899999
Q ss_pred CCCCCCeEEEEEEEeCCcce--EEEEEEEEeeC
Q psy12421 119 CKPEDSGEYKCVATNKHGTD--ETNCVVIVESE 149 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~~~ 149 (168)
++.+|+|.|.|.+.|..+.. .....|.|...
T Consensus 88 v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~ 120 (247)
T 2ghw_B 88 LRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSG 120 (247)
T ss_dssp CCGGGCEEEEEEEEETTEEEEECCCEEEEECSC
T ss_pred CCHHHCEEEEEeeeccCCccccCCceEEEEecc
Confidence 99999999999999984332 22346677654
No 336
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.08 E-value=6.1e-10 Score=77.96 Aligned_cols=89 Identities=16% Similarity=0.310 Sum_probs=64.5
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCe-----eEEEeCCEECCC---------CCe-------EEE---ecCCEEEEEEccC
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPT-----VKWYKGNRELSK---------RDY-------SMS---YSDGVVSMEIIDC 119 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~-----i~W~~~~~~~~~---------~~~-------~~~---~~~~~~~l~i~~~ 119 (168)
+....+.+|+++.|.|.+.|.|.+. +.|++++..... ... .+. ...+..+|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 3345788999999999999988876 999986432110 000 000 0112235999999
Q ss_pred CCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCc
Q psy12421 120 KPEDSGEYKCVATNKHGTDETNCVVIVESEEES 152 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 152 (168)
+..|+|.|.|.+.|..+.......|.|..+|..
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v 122 (248)
T 3pv7_A 90 QLEEAGEYRCEVVVTPLKAQGTVQLEVVASPAS 122 (248)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEE
T ss_pred CHHHCeEEEEEEEeCCccceeEEEEEEecCCce
Confidence 999999999999999888888888888876653
No 337
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.08 E-value=1.1e-09 Score=74.86 Aligned_cols=84 Identities=15% Similarity=0.158 Sum_probs=61.5
Q ss_pred cCCeEEecCCcEEEEEEEeccC---CCeeEEEeCC--EEC-------------CCCCeEEEecCCEEEEEEccCCCCCCe
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKP---PPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSG 125 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p---~p~i~W~~~~--~~~-------------~~~~~~~~~~~~~~~l~i~~~~~~d~G 125 (168)
+....+.+|+++.|.|.+.+.| .+.+.|++++ ..+ ...++......+...|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 6667889999999999999877 4789999853 211 123444444455668999999999999
Q ss_pred EEEEEEEeCCcceE-EEEEEEEe
Q psy12421 126 EYKCVATNKHGTDE-TNCVVIVE 147 (168)
Q Consensus 126 ~Y~C~a~n~~g~~~-~~~~l~v~ 147 (168)
.|.|.+.|..+... ....|.|.
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~ 109 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVL 109 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEEC
T ss_pred EEEEEEecCchhhcCCCeEEEEe
Confidence 99999999876422 23355553
No 338
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.08 E-value=4.7e-10 Score=78.42 Aligned_cols=78 Identities=17% Similarity=0.275 Sum_probs=58.2
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEe----------------CCEECCC----CCeEEEe-cCCEEEEEEc
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK----------------GNRELSK----RDYSMSY-SDGVVSMEII 117 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~----------------~~~~~~~----~~~~~~~-~~~~~~l~i~ 117 (168)
.+...+....+.+|+++.|.|.+.+.+.+.+.|++ ++..... .++.+.. ..+..+|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 45556667889999999999999999999999998 2221111 2233322 2445689999
Q ss_pred cCCCCCCeEEEEEEEeCCc
Q psy12421 118 DCKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 118 ~~~~~d~G~Y~C~a~n~~g 136 (168)
+++.+|+|.|.|.+.|..+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~ 101 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGD 101 (246)
T ss_dssp SCCGGGCEEEEEEECCSSG
T ss_pred CCCHHHCEEEEEEEecCCC
Confidence 9999999999999987644
No 339
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.08 E-value=3.7e-10 Score=78.52 Aligned_cols=90 Identities=19% Similarity=0.259 Sum_probs=60.2
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EEC----------------CCCCeEEEe-cCCEEEEEEccCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--REL----------------SKRDYSMSY-SDGVVSMEIIDCK 120 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~----------------~~~~~~~~~-~~~~~~l~i~~~~ 120 (168)
+...+....+.+|+++.|.|. .+.|.+.+.|+++. ..+ ...++.+.. .....+|.|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 445666788999999999999 78899999999851 110 122333332 2234479999999
Q ss_pred CCCCeEEEEEEEeCCcce-----EEEEEEEEeeCC
Q psy12421 121 PEDSGEYKCVATNKHGTD-----ETNCVVIVESEE 150 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~p 150 (168)
.+|+|.|.|.+.|..|.. .....|.|...+
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~ 116 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSA 116 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCC
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccC
Confidence 999999999999986531 123456665544
No 340
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.08 E-value=2e-10 Score=83.10 Aligned_cols=131 Identities=11% Similarity=0.077 Sum_probs=84.0
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEe-ccCCCeeEEEeC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLS-GKPPPTVKWYKG 94 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~~ 94 (168)
.|.+.+++..|.|. |.|.... .............+..+|.+........+..++...+.|.+. +.|.|.+.|+++
T Consensus 80 sL~I~~v~~~D~G~--Y~C~v~~--~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~ 155 (313)
T 4fqp_A 80 SLRMFGLRVEDEGN--YTCLFVT--FPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSD 155 (313)
T ss_dssp CEEECSCCGGGCEE--EEEEEEC--SSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEET
T ss_pred EEEECcCChhhCEE--EEEEEee--ccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecC
Confidence 47788888888666 5332211 111112222223455678877777777777888899999865 789999999999
Q ss_pred CEECCCCCeEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceE--EEEEEEEeeCC
Q psy12421 95 NRELSKRDYSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDE--TNCVVIVESEE 150 (168)
Q Consensus 95 ~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~v~~~p 150 (168)
+..+..........++ .+.|.|......|.|.|+|.|.|..+... ....|.|..+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P 217 (313)
T 4fqp_A 156 LGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPP 217 (313)
T ss_dssp TCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEE
T ss_pred CccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCC
Confidence 8755332111111122 12588888889999999999999876643 34455555544
No 341
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.08 E-value=8.4e-10 Score=77.57 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=66.7
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccC-----CCeeEEEeCCE--EC-----------C--CCCeEEEecCCEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKP-----PPTVKWYKGNR--EL-----------S--KRDYSMSYSDGVVSME 115 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p-----~p~i~W~~~~~--~~-----------~--~~~~~~~~~~~~~~l~ 115 (168)
..+.+...+....+.+|+++.|.|.+.+.| .+.+.|++++. .+ . ..++......+..+|.
T Consensus 33 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 112 (252)
T 3bkj_L 33 SDVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLR 112 (252)
T ss_dssp -CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred cccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEE
Confidence 345666667778899999999999999887 68999998541 11 0 2344444445566899
Q ss_pred EccCCCCCCeEEEEEEEeCCcceE-EEEEEEEee
Q psy12421 116 IIDCKPEDSGEYKCVATNKHGTDE-TNCVVIVES 148 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 148 (168)
|.+++.+|+|.|.|.+.|..+... ....|.|..
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 146 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKR 146 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEECC
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEeC
Confidence 999999999999999998765322 223566644
No 342
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.08 E-value=7.2e-10 Score=68.56 Aligned_cols=77 Identities=19% Similarity=0.251 Sum_probs=57.6
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-----EC----------CCCCeEEEecCCEEEEEEccCCCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-----EL----------SKRDYSMSYSDGVVSMEIIDCKPE 122 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-----~~----------~~~~~~~~~~~~~~~l~i~~~~~~ 122 (168)
+.+...+....+.+|++++|.|.+.+.+.+.+.|++... .+ ...++......+...|.|.+++.+
T Consensus 5 ~~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 84 (111)
T 1i3g_L 5 IVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSE 84 (111)
T ss_dssp CCEEESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHH
Confidence 344555666788899999999999888788999998541 11 023444443445568999999999
Q ss_pred CCeEEEEEEEeC
Q psy12421 123 DSGEYKCVATNK 134 (168)
Q Consensus 123 d~G~Y~C~a~n~ 134 (168)
|+|.|.|.+.+.
T Consensus 85 DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 85 DLADYFCQQYSS 96 (111)
T ss_dssp GCSEEEEEECSS
T ss_pred HCEEEEEEEecC
Confidence 999999999875
No 343
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=99.08 E-value=7e-10 Score=70.57 Aligned_cols=91 Identities=18% Similarity=0.315 Sum_probs=64.3
Q ss_pred EeecCCeEEecCCcEEEEEEEeccC-CCeeEEEeC--CEE---C-----------CCCCeEEE--ecCCEEEEEEccCCC
Q psy12421 61 TFLLRPRVMQVRQTCKLLCCLSGKP-PPTVKWYKG--NRE---L-----------SKRDYSMS--YSDGVVSMEIIDCKP 121 (168)
Q Consensus 61 ~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~~~--~~~---~-----------~~~~~~~~--~~~~~~~l~i~~~~~ 121 (168)
...+....+.+|++++|.|...+.. ...+.||+. +.. + ...++.+. ...+..+|.|.+++.
T Consensus 5 ~Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~ 84 (129)
T 3rrq_A 5 TFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARR 84 (129)
T ss_dssp EEECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCG
T ss_pred EECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCCh
Confidence 3456678899999999999987754 567899974 210 1 01234333 233456899999999
Q ss_pred CCCeEEEEEEEeCCcce----EEEEEEEEeeCCC
Q psy12421 122 EDSGEYKCVATNKHGTD----ETNCVVIVESEEE 151 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~~----~~~~~l~v~~~p~ 151 (168)
+|+|.|.|.+.|..+.. .....|.|.+.+.
T Consensus 85 ~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~~ 118 (129)
T 3rrq_A 85 NDSGTYLCGAISLAPKLQIKESLRAELRVTERRA 118 (129)
T ss_dssp GGCEEEEEEEEECGGGCEEEECCCEEEEEECCCC
T ss_pred hHCEEEEEEEEecCCCceeeEeceEEEEEecCcc
Confidence 99999999999987765 3456788876543
No 344
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.08 E-value=4.9e-10 Score=71.42 Aligned_cols=86 Identities=21% Similarity=0.367 Sum_probs=59.5
Q ss_pred eecCCeEEecCCcEEEEEEEec---cCCCeeEEEeCCEECC-----------------------------C--CCeEEEe
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSG---KPPPTVKWYKGNRELS-----------------------------K--RDYSMSY 107 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g---~p~p~i~W~~~~~~~~-----------------------------~--~~~~~~~ 107 (168)
..+....+.+|+++.|.|.+.. .+.+.+.|+++..... . .+..+ .
T Consensus 9 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~-~ 87 (135)
T 1xt5_A 9 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV-A 87 (135)
T ss_dssp CSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEE-S
T ss_pred CCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEE-e
Confidence 3445577889999999999753 6788999998643210 0 11111 1
Q ss_pred cCCEEEEEEccCCCCCCeEEEEEEEeC-----CcceEEEEEEEEee
Q psy12421 108 SDGVVSMEIIDCKPEDSGEYKCVATNK-----HGTDETNCVVIVES 148 (168)
Q Consensus 108 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~-----~g~~~~~~~l~v~~ 148 (168)
..+..+|.|.+++.+|+|.|.|.+.|. .|.....+.|.|..
T Consensus 88 ~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 88 NLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp CTTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred cCCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence 112236999999999999999999985 34455777777754
No 345
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.07 E-value=2.2e-10 Score=83.17 Aligned_cols=94 Identities=5% Similarity=0.001 Sum_probs=69.3
Q ss_pred ecCCeEEecCCcEEEEEEEecc-----CCCeeEEEeCCEECCCCCeEEEecCC-EEEEEEccCCCCCCeEEEEEEEeCCc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGK-----PPPTVKWYKGNRELSKRDYSMSYSDG-VVSMEIIDCKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~-----p~p~i~W~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~G~Y~C~a~n~~g 136 (168)
.+.+..+..|+++.|.|.+.+. |.+.+.|.+++..+...+......+. ...|.|.++...|+|.|.|.+.+..+
T Consensus 6 ~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~ 85 (313)
T 2d9q_B 6 SVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSL 85 (313)
T ss_dssp EESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTCEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSE
T ss_pred ECCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCccceEEEecCeEEEEEEEeccCCCccceEEeeecCCCc
Confidence 3456788899999999999987 67899999999877544222111221 14799999999999999998876555
Q ss_pred ceEEEEEEEEeeCCCchhhh
Q psy12421 137 TDETNCVVIVESEEESKEQQ 156 (168)
Q Consensus 137 ~~~~~~~l~v~~~p~~~~~~ 156 (168)
.....+.|.+..+|..|...
T Consensus 86 ~~~~~~~l~v~~~P~~P~~l 105 (313)
T 2d9q_B 86 QILDQVELRAGYPPAIPHNL 105 (313)
T ss_dssp EEEEEEEEEECCCCCCCEEE
T ss_pred eeEEEEEEccCCCCCCCccc
Confidence 44556778887777666543
No 346
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.07 E-value=1e-09 Score=75.37 Aligned_cols=86 Identities=21% Similarity=0.297 Sum_probs=60.5
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeC--CEECC------------------CCCeEEEec--CCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKG--NRELS------------------KRDYSMSYS--DGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~--~~~~~------------------~~~~~~~~~--~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++ +..+. ..++.+... .+..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINN 85 (219)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECC
Confidence 45567788999999999999865 789999986 32110 123333221 3345899999
Q ss_pred CCCCCCeEEEEEEEeCCcce----EEEEEEEEee
Q psy12421 119 CKPEDSGEYKCVATNKHGTD----ETNCVVIVES 148 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~----~~~~~l~v~~ 148 (168)
++.+|+|.|.|.+.|..+.. .....|.|..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 119 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSS 119 (219)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEECCCEEEEECC
T ss_pred CCcccCEEEEEEEeccCcccceeecCceEEEEec
Confidence 99999999999999987422 1245666665
No 347
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.07 E-value=2.1e-10 Score=76.44 Aligned_cols=81 Identities=16% Similarity=0.167 Sum_probs=60.4
Q ss_pred CeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCC-------------CCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 66 PRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK-------------RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~-------------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
...+.+|+.++|.|.+.+ |.+.+.|++++..+.. .+..+...++ +|.|.+++..|+|.|.|.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~--sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSG--SLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTC--CEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCC--eEEECCCChhhCceEEEEEe
Confidence 356778999999999844 8899999998764311 1112212334 79999999999999999999
Q ss_pred eCCcceEEEEEEEEeeCCC
Q psy12421 133 NKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 133 n~~g~~~~~~~l~v~~~p~ 151 (168)
|..| ...+.|.|..++.
T Consensus 81 n~~~--~~~~~L~V~~~~~ 97 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEMVS 97 (171)
T ss_dssp TCCS--CEEEEEEEECCCC
T ss_pred CCCC--cEEEEEEEECcCC
Confidence 9888 5677788876544
No 348
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.07 E-value=4.8e-10 Score=90.15 Aligned_cols=99 Identities=14% Similarity=0.348 Sum_probs=75.2
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeE-EE--eCCEECCCCCeEEEe-cCCEEEEEEccCCCCCCeEEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVK-WY--KGNRELSKRDYSMSY-SDGVVSMEIIDCKPEDSGEYKCVA 131 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~-W~--~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a 131 (168)
.+|.|. .+.+..+.+|+++.|.|.+.|.|.|.+. |+ +++..+......... ......|.|.++...|.|.|+|.|
T Consensus 164 ~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A 242 (731)
T 2v5y_A 164 RTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMI 242 (731)
T ss_dssp SSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEE
T ss_pred cccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEE
Confidence 567776 5678899999999999999999999988 88 666655332211111 111247999999999999999999
Q ss_pred EeCCcc-eEEEEEEEEeeCCCchhh
Q psy12421 132 TNKHGT-DETNCVVIVESEEESKEQ 155 (168)
Q Consensus 132 ~n~~g~-~~~~~~l~v~~~p~~~~~ 155 (168)
.|..|. ......|.|..+|..+..
T Consensus 243 ~n~~G~~~s~~~~l~V~~~P~~~~~ 267 (731)
T 2v5y_A 243 RTEGGVGISNYAELVVKEPPVPIAP 267 (731)
T ss_dssp EETTEEEECCCEEEEEECCCCBSSC
T ss_pred ECCCCCcceeeEEEEEecCCCCCCC
Confidence 999998 666778888887765543
No 349
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.07 E-value=2.2e-09 Score=77.50 Aligned_cols=91 Identities=15% Similarity=0.237 Sum_probs=68.4
Q ss_pred eecCCeEEecCCcEEEEEEEecc-------CCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGK-------PPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~-------p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
..+.+..+..|+++.|.|.+.+. |.|.+.|++++..+...++.+. .+....|.|.++...+ |.|+|.|.|.
T Consensus 9 i~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~~~~~~-~~~~~~L~i~~~~~~~-g~Y~C~a~~~ 86 (303)
T 1i1r_A 9 ISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTII-NRTASSVTFTDIASLN-IQLTCNILTF 86 (303)
T ss_dssp EESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGGGCEEE-ETTEEEEEECSCCCSE-EEEEEEEEET
T ss_pred EccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChhheeee-CCcEEEEEEcCcCCCc-eEEEEecccC
Confidence 46677889999999999999864 7899999999998865544443 3334579999999884 9999999884
Q ss_pred Ccce---EEEEEEEEeeCCCchhh
Q psy12421 135 HGTD---ETNCVVIVESEEESKEQ 155 (168)
Q Consensus 135 ~g~~---~~~~~l~v~~~p~~~~~ 155 (168)
|.. .....|.+..+|..|..
T Consensus 87 -g~~~~~~~~~~l~v~~~P~~P~~ 109 (303)
T 1i1r_A 87 -GQLEQNVYGITIISGLPPEKPKN 109 (303)
T ss_dssp -TTEEEEEEEEEEEEECCCCCCEE
T ss_pred -CCcceEEEEEEEeccCCCCCCee
Confidence 432 23455667777766553
No 350
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.07 E-value=8e-10 Score=77.86 Aligned_cols=79 Identities=18% Similarity=0.260 Sum_probs=58.7
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEec--cCCCeeEEEeCC--EEC------------------CCCCeEEE--ecCCE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSG--KPPPTVKWYKGN--REL------------------SKRDYSMS--YSDGV 111 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g--~p~p~i~W~~~~--~~~------------------~~~~~~~~--~~~~~ 111 (168)
.+|.+...+....+.+|+++.|.|.+.+ .+.+.+.|++.. ..+ ...++.+. ...+.
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 3567777888899999999999999988 478899999742 100 01233333 22445
Q ss_pred EEEEEccCCCCCCeEEEEEEEeC
Q psy12421 112 VSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 112 ~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
.+|.|.+++.+|+|.|.|.+.|.
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGE 107 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCC
T ss_pred EEEEECCCCcccCEEEEEeEEec
Confidence 67999999999999999999987
No 351
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.06 E-value=2.3e-10 Score=80.38 Aligned_cols=118 Identities=19% Similarity=0.221 Sum_probs=71.8
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcce----eeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CC-Cee
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQ----ITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PP-PTV 89 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i 89 (168)
.|.+.+++..|.|. |.|. +.+..... ..+.......+|.+...........|+.+.|.|.+.|. |. +.+
T Consensus 114 ~L~I~~v~~~D~G~--Y~C~---a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v 188 (254)
T 2c1o_A 114 TLKISRVEAEDLGI--YYCV---QGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINV 188 (254)
T ss_dssp EEEESSCCGGGCSE--EEEE---ECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEE
T ss_pred EEEECcCCcccCEE--EEEE---EEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEE
Confidence 35566777777655 4322 22221111 11211222346777655444333468899999999884 44 469
Q ss_pred EEEeCCEECCCC-CeEEE---ecCC----EEEEEEccCCCCCCeEEEEEEEeCCcce
Q psy12421 90 KWYKGNRELSKR-DYSMS---YSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 90 ~W~~~~~~~~~~-~~~~~---~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 138 (168)
.|++++..+... ..... ..++ ...|.|.++...|+|.|+|.|.|.....
T Consensus 189 ~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 189 KWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp EEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred EEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 999999877554 11100 0111 2469999999999999999999987654
No 352
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.06 E-value=1.1e-09 Score=74.43 Aligned_cols=84 Identities=17% Similarity=0.207 Sum_probs=56.7
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCe---eEEEeCCEECCCCCeE-----------------EEe-----cCCEEEEEEcc
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPT---VKWYKGNRELSKRDYS-----------------MSY-----SDGVVSMEIID 118 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~---i~W~~~~~~~~~~~~~-----------------~~~-----~~~~~~l~i~~ 118 (168)
+....+.+|+++.|.|.+.+.|.+. +.|+|++......... ... ..+..+|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 4456788999999999999988764 8999976533211000 000 11123699999
Q ss_pred CCCCCCeEEEEEEEeCCcceEEE-EEEEEe
Q psy12421 119 CKPEDSGEYKCVATNKHGTDETN-CVVIVE 147 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~ 147 (168)
++..|+|.|.|.+.|..+..... ..+.+.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~ 115 (218)
T 4frw_A 86 AVQADEGEYECRVSTFPAGSFQARLRLRVL 115 (218)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ccHHHCCceeEEEEeccCceeeeEEEEEEe
Confidence 99999999999999876654443 334443
No 353
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.06 E-value=3e-10 Score=77.60 Aligned_cols=71 Identities=21% Similarity=0.422 Sum_probs=55.4
Q ss_pred cCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EECC-------------CCCeEEEecCCEEEEEEccCCCCCCeEEE
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--RELS-------------KRDYSMSYSDGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~~-------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 128 (168)
+....+.+|+++.|.|.+.+.|.+.+.|+++. ..+. ..++.+....+...|.|.+++.+|+|.|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 55678889999999999988888899999852 2210 23444444555668999999999999999
Q ss_pred EEEEeC
Q psy12421 129 CVATNK 134 (168)
Q Consensus 129 C~a~n~ 134 (168)
|.+.|.
T Consensus 86 C~~~n~ 91 (212)
T 1nfd_E 86 CLSSYG 91 (212)
T ss_dssp EEEEET
T ss_pred EEEEcc
Confidence 999973
No 354
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.05 E-value=6.8e-10 Score=78.11 Aligned_cols=86 Identities=19% Similarity=0.244 Sum_probs=60.3
Q ss_pred CCeEEecCCcEEEEEEEecc--CCCeeEEEeCC--EEC-------------CCCCeEEEecCCEEEEEEccCCCCCCeEE
Q psy12421 65 RPRVMQVRQTCKLLCCLSGK--PPPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 65 ~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~--~~~-------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 127 (168)
....+.+|+++.|.|.+.+. +.+.+.|+++. ..+ ...++.........+|.|.+++.+|+|.|
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp SEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 34678899999999999887 78899999842 111 11344444445566899999999999999
Q ss_pred EEEEEeCCcce---EEEEEEEEeeCC
Q psy12421 128 KCVATNKHGTD---ETNCVVIVESEE 150 (168)
Q Consensus 128 ~C~a~n~~g~~---~~~~~l~v~~~p 150 (168)
.|.+.|..+.. .....|.|...+
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~ 115 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSG 115 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC---
T ss_pred EEEEEECCCCceEECCCEEEEEECCC
Confidence 99999976532 233466666544
No 355
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.05 E-value=3.2e-10 Score=77.48 Aligned_cols=119 Identities=14% Similarity=0.156 Sum_probs=74.3
Q ss_pred CceeEEEEeCCCCCCCCCCcccce---eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCC--eeE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQV---RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP--TVK 90 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~ 90 (168)
.|.+.+++..|.|. |.|..... .......+.+ .....+|.+...+....+..|+.+.|.|.+.|.+++ .+.
T Consensus 72 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~l~V--~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~ 147 (213)
T 3r06_A 72 SFTISSLESEDIGS--YYCQQYYNYPWTFGPGTKLEI--KRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVK 147 (213)
T ss_dssp EEEESSCCGGGCSE--EEEEECSSSSCEECCCEEEEE--CCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEE
T ss_pred EEEECCCCcccCEE--EEEecccCCceEEcCCceEEE--eccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEE
Confidence 46677778888666 43332211 1111222222 233567888776666666678889999999986643 899
Q ss_pred EEeCCEECCCCC-eE--EE-ecCC----EEEEEEccCCCCCCeEEEEEEEeCCcce
Q psy12421 91 WYKGNRELSKRD-YS--MS-YSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 91 W~~~~~~~~~~~-~~--~~-~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 138 (168)
|++++..+.... .. .. ..++ ...|.+......|.|.|+|.|.|.....
T Consensus 148 W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 148 WKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp EEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred EEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 999998876431 00 00 0111 1257777777888999999999986443
No 356
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.05 E-value=1.8e-10 Score=77.75 Aligned_cols=76 Identities=17% Similarity=0.264 Sum_probs=59.1
Q ss_pred ecCCeEEecCCcEEEEEE-EeccCC-CeeEEEeCCEECCC---CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcc
Q psy12421 63 LLRPRVMQVRQTCKLLCC-LSGKPP-PTVKWYKGNRELSK---RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT 137 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~-~~g~p~-p~i~W~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 137 (168)
.+....+.+|+.+.|.|. +.+.|. +.+.|++++..+.. ........++ .|.|.+++..|+|.|+|.+.|..+.
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~~~~~~~~ 91 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG--NLYIANVEASDKGNYSCFVSSPSIT 91 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTC--CEEESSCCGGGCEEEEEEEEEGGGT
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCC--eEEECcCCcccCeEEEEEEEecCCC
Confidence 445678999999999999 889998 99999999876631 2222222333 6999999999999999999997765
Q ss_pred eEE
Q psy12421 138 DET 140 (168)
Q Consensus 138 ~~~ 140 (168)
...
T Consensus 92 ~~~ 94 (201)
T 3s97_C 92 KSV 94 (201)
T ss_dssp EEE
T ss_pred cch
Confidence 443
No 357
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.05 E-value=4.1e-11 Score=83.16 Aligned_cols=87 Identities=18% Similarity=0.248 Sum_probs=58.8
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCC--CeeEEEeCCEECCCCCeE---EEecC----CEEEEEEccCCCCCCeE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPP--PTVKWYKGNRELSKRDYS---MSYSD----GVVSMEIIDCKPEDSGE 126 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~---~~~~~----~~~~l~i~~~~~~d~G~ 126 (168)
.+|.+...........|+.+.|.|.+.|.++ +.+.|++++..+...... ....+ ....|.|......|.|.
T Consensus 134 ~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 213 (234)
T 2j6e_L 134 AAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRS 213 (234)
T ss_dssp CCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCC
T ss_pred CCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCe
Confidence 4566554443333345889999999998544 389999999987543110 00111 12368888889999999
Q ss_pred EEEEEEeCCcceEEEE
Q psy12421 127 YKCVATNKHGTDETNC 142 (168)
Q Consensus 127 Y~C~a~n~~g~~~~~~ 142 (168)
|+|.|.|..+....++
T Consensus 214 Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 214 YSCQVTHEGSTVEKTV 229 (234)
T ss_dssp EEEEEEBTTBCCCEEE
T ss_pred EEEEEEeCCCceEEec
Confidence 9999999987654443
No 358
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.05 E-value=3.2e-10 Score=76.18 Aligned_cols=61 Identities=21% Similarity=0.346 Sum_probs=46.3
Q ss_pred CCcEEEEEEE-eccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEE
Q psy12421 72 RQTCKLLCCL-SGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCV 143 (168)
Q Consensus 72 g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 143 (168)
+..+.|.|.+ .| |.|.+.|++++..+.. ..+. +|.+.. ..|+|.|+|.|.|..+.......
T Consensus 115 ~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~------~~~~--~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 115 CSNATLTCEVLEG-TDVELKLYQGKEHLRS------LRQK--TMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp GGGTEEEEECSSC-TTCEEEEEETTEEEEE------ESSS--EEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred CCCEEEEEEeCCC-CCCEEEEEECCeECcC------CCCC--EEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 4569999999 56 9999999999987641 1222 455532 78999999999999988765553
No 359
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.04 E-value=8.9e-10 Score=76.67 Aligned_cols=116 Identities=12% Similarity=0.105 Sum_probs=70.4
Q ss_pred CceeEEEEeCCCCCCCCCCccccee---ccCcceeeEeeeccc-CCCeEEeecCCeEEecCCcEEEEEEEeccC--CCee
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVR---RREPLQITFWQETVE-SAPNFTFLLRPRVMQVRQTCKLLCCLSGKP--PPTV 89 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i 89 (168)
.|.+.+++..|.+. |.|...... ......+.+...... .++.+...+....+.+|+++.|.|.+.+.| .+.+
T Consensus 76 ~L~I~~v~~~D~G~--Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v 153 (240)
T 1moe_A 76 TLIIDPVEADDVAT--YYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYM 153 (240)
T ss_dssp EEEESSCCGGGCEE--EEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCE
T ss_pred EEEEcCCChhhCEE--EEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEE
Confidence 35666778888666 432222111 111122222211111 123355567778899999999999999877 4699
Q ss_pred EEEeC--CEEC------------------CCCCeEEEec--CCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 90 KWYKG--NREL------------------SKRDYSMSYS--DGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 90 ~W~~~--~~~~------------------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
.|+++ +..+ ...++.+... .....|.|.+++.+|+|.|.|.|.+
T Consensus 154 ~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 154 HWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 99995 2211 0123333221 3445799999999999999999984
No 360
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.04 E-value=5.3e-10 Score=69.13 Aligned_cols=75 Identities=19% Similarity=0.275 Sum_probs=55.6
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC----CCeeEEEeCC--E--E-CC----------CCCeEEEecCCEEEEEEccCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP----PPTVKWYKGN--R--E-LS----------KRDYSMSYSDGVVSMEIIDCK 120 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p----~p~i~W~~~~--~--~-~~----------~~~~~~~~~~~~~~l~i~~~~ 120 (168)
+...+....+.+|+++.|.|.+.+.+ .+.+.|+++. . . +. ..++......+..+|.|.+++
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~ 83 (111)
T 1j05_L 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (111)
T ss_dssp EEEECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC
T ss_pred EEEeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCC
Confidence 34456667888999999999998876 5789999853 1 1 10 234444444556689999999
Q ss_pred CCCCeEEEEEEEeC
Q psy12421 121 PEDSGEYKCVATNK 134 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~ 134 (168)
.+|+|.|.|.+.|.
T Consensus 84 ~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 84 ADDVATYYCQQTNE 97 (111)
T ss_dssp GGGCEEEEEEECSS
T ss_pred cccCEEEEEEEecC
Confidence 99999999999875
No 361
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.04 E-value=1.4e-10 Score=82.23 Aligned_cols=128 Identities=10% Similarity=0.073 Sum_probs=76.9
Q ss_pred CceeEEEEeCCCCCCCCCCcccc-------eeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCe
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQ-------VRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPT 88 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~ 88 (168)
.+.+.++...|.|. |.|.... .....++.+.+. ....+|.+...+. ..+.+|++++|.|.+.+. .+.
T Consensus 63 ~L~I~~v~~~DsG~--Y~C~a~~~~~~~~~s~~S~~~~L~V~--~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~ 136 (257)
T 1b6u_A 63 NFSIGPMMQDLAGT--YRCYGSVTHSPYQLSAPSDPLDIVIT--GLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDM 136 (257)
T ss_dssp EEEECSCCTTTCEE--EEEEEECSSCTTSCCCCCCCEEEEEE--CSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSE
T ss_pred EEEeecCCcccCEE--EEEeEeccCCCccccccCCCEEEecc--cCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcE
Confidence 45566677777665 4433211 011222333332 2234567665544 457899999999998775 478
Q ss_pred eEEEeCCEECCCCCeEEEec--CCEEEEEEccCCCCCCeEEEEEEEeCCc-----ceEEEEEEEEeeCCC
Q psy12421 89 VKWYKGNRELSKRDYSMSYS--DGVVSMEIIDCKPEDSGEYKCVATNKHG-----TDETNCVVIVESEEE 151 (168)
Q Consensus 89 i~W~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~~p~ 151 (168)
+.|+|++..+.......... .....|.|.+++ |+|.|+|.+.|... ..+..+.|.|.+.|.
T Consensus 137 ~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 137 YHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp EEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred EEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 99999987654321111111 113478999998 99999999997532 123456777777654
No 362
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.04 E-value=1.4e-09 Score=77.88 Aligned_cols=91 Identities=19% Similarity=0.288 Sum_probs=63.3
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC------------------CCCCeEEEe--cCCEEEEE
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL------------------SKRDYSMSY--SDGVVSME 115 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~------------------~~~~~~~~~--~~~~~~l~ 115 (168)
+...+....+.+|++++|.|.+.+.+ .+.+.|++++ ..+ ...++.+.. ..+..+|.
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 108 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQ 108 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEE
Confidence 34566778899999999999998875 6899999853 110 012333332 23456899
Q ss_pred EccCCCCCCeEEEEEEEeCCcc---e--EEEEEEEEeeCC
Q psy12421 116 IIDCKPEDSGEYKCVATNKHGT---D--ETNCVVIVESEE 150 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~~g~---~--~~~~~l~v~~~p 150 (168)
|.+++.+|+|.|.|.+.|..|. . .....|.|...+
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~ 148 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGG 148 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC--
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCC
Confidence 9999999999999999998762 1 123467776544
No 363
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.04 E-value=2.5e-09 Score=69.52 Aligned_cols=93 Identities=17% Similarity=0.171 Sum_probs=64.1
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-----ECC----------CCCeEEEecCCEEEEEEccCCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-----ELS----------KRDYSMSYSDGVVSMEIIDCKP 121 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-----~~~----------~~~~~~~~~~~~~~l~i~~~~~ 121 (168)
.+.+...+....+.+|++++|.|.+.+.+.+.+.||+... .+. ..++.........+|.|.+++.
T Consensus 16 ~~~v~q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~ 95 (146)
T 2yc1_B 16 EIVLTQSPATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEP 95 (146)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEEeCCEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCH
Confidence 3455666777889999999999999887778899998531 110 2344444444566799999999
Q ss_pred CCCeEEEEEEEeCCcce-EEEEEEEEeeC
Q psy12421 122 EDSGEYKCVATNKHGTD-ETNCVVIVESE 149 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 149 (168)
+|+|.|.|.+.+..... -....|.|..+
T Consensus 96 ~DsG~Y~C~~~~~~~~~fg~GT~L~V~~~ 124 (146)
T 2yc1_B 96 EDFAIYYCQQYRYSPRTFGQGTKVEIKRA 124 (146)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred HHCEEEEEEEecCCCCeECCCEEEEEeCC
Confidence 99999999998753221 12335666543
No 364
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.04 E-value=1.2e-09 Score=74.65 Aligned_cols=103 Identities=18% Similarity=0.243 Sum_probs=66.7
Q ss_pred ecCCeEEecCCcEEEEEEEecc-------CCCeeEEEeCCEEC------C------------CCCeEEEe--cCCEEEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGK-------PPPTVKWYKGNREL------S------------KRDYSMSY--SDGVVSME 115 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~-------p~p~i~W~~~~~~~------~------------~~~~~~~~--~~~~~~l~ 115 (168)
.+....+.+|+++.|.|.+.+. +.+.+.|++++... . ..++.+.. ..+..+|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 85 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLS 85 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEE
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEE
Confidence 4556788899999999998754 57889999986421 0 12222211 12233699
Q ss_pred EccCCCCCCeEEEEEEEeCCcceE----EEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 116 IIDCKPEDSGEYKCVATNKHGTDE----TNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~~g~~~----~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
|.+++.+|+|.|.|.+.+..+... ....|.|...+..+... .+. .+.+|+
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~-~~~-~~~~G~ 139 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIH-FLE-PLESGR 139 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C-CCCTTC
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCcee-cCc-cccCCC
Confidence 999999999999999999864322 35677777655433321 222 255665
No 365
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.04 E-value=2.5e-09 Score=75.31 Aligned_cols=90 Identities=19% Similarity=0.252 Sum_probs=60.2
Q ss_pred EEeecCCeEEecCCcEEEEEEEecc--CCCeeEEEeCCE-----EC--------------CCCCeEEEe--cCCEEEEEE
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKGNR-----EL--------------SKRDYSMSY--SDGVVSMEI 116 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~~-----~~--------------~~~~~~~~~--~~~~~~l~i 116 (168)
....+....+.+|+++.|.|.+.+. +.+.+.|++... .+ ...++.+.. ..+..+|.|
T Consensus 11 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 90 (257)
T 3gkz_A 11 QLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQL 90 (257)
T ss_dssp EEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred EEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEE
Confidence 3445667789999999999999884 578999998421 11 012333322 234557999
Q ss_pred ccCCCCCCeEEEEEEEeCCcc----eEEEEEEEEeeC
Q psy12421 117 IDCKPEDSGEYKCVATNKHGT----DETNCVVIVESE 149 (168)
Q Consensus 117 ~~~~~~d~G~Y~C~a~n~~g~----~~~~~~l~v~~~ 149 (168)
.+++.+|+|.|.|.+.|..+. ......|.|...
T Consensus 91 ~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~ 127 (257)
T 3gkz_A 91 KSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGG 127 (257)
T ss_dssp CSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC--
T ss_pred CCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCc
Confidence 999999999999999997221 223345666554
No 366
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.03 E-value=5.4e-10 Score=78.89 Aligned_cols=90 Identities=17% Similarity=0.181 Sum_probs=58.3
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEe---ccCCCeeEEEeCCEECCCC-------------------CeEEEe--cCCEEE
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLS---GKPPPTVKWYKGNRELSKR-------------------DYSMSY--SDGVVS 113 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~---g~p~p~i~W~~~~~~~~~~-------------------~~~~~~--~~~~~~ 113 (168)
+.+...+....+.+|+.+.|.|.+. +.+.+.+.|++++...... +..+.. ..+..+
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 4455566667889999999999987 6778889999965422111 111100 011236
Q ss_pred EEEccCCCCCCeEEEEEEEeCCcceEE--EEEEEEe
Q psy12421 114 MEIIDCKPEDSGEYKCVATNKHGTDET--NCVVIVE 147 (168)
Q Consensus 114 l~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~v~ 147 (168)
|.|.+++.+|+|.|.|.+.|..+.... ...|.|.
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 121 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL 121 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe
Confidence 999999999999999999998665433 4445443
No 367
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.03 E-value=1.1e-09 Score=80.51 Aligned_cols=86 Identities=20% Similarity=0.298 Sum_probs=61.7
Q ss_pred ecCCeEEecCCcEEEEEEEecc--CCCeeEEEeC--CEEC------------------CCCCeEEEec--CCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKG--NREL------------------SKRDYSMSYS--DGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~--~~~~------------------~~~~~~~~~~--~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+. +.+.+.|+++ +..+ ...++.+... .+..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 4456778899999999999886 3688999986 3211 0123333322 3456899999
Q ss_pred CCCCCCeEEEEEEEeCCcceEEEEEEEEee
Q psy12421 119 CKPEDSGEYKCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 148 (168)
++.+|+|.|.|.+.|..+.......|.|..
T Consensus 86 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~ 115 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAYWGQGTLVTVSS 115 (344)
T ss_dssp CCGGGCEEEEEEETTTTCEECCCEEEEECS
T ss_pred CCcccCEEEEEEEecCcceecCcEEEEEec
Confidence 999999999999999655444456677763
No 368
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.02 E-value=2.2e-09 Score=74.17 Aligned_cols=87 Identities=17% Similarity=0.269 Sum_probs=57.7
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-eeEEEe-CCEECCCCC-eEEEecCC----EEEEEEccCCC--CCCe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-TVKWYK-GNRELSKRD-YSMSYSDG----VVSMEIIDCKP--EDSG 125 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~W~~-~~~~~~~~~-~~~~~~~~----~~~l~i~~~~~--~d~G 125 (168)
.+|.+........+..|+.+.|.|.+.|. |.| .+.|++ ++..+.... ......++ ...|.|..... .|.|
T Consensus 125 ~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g 204 (223)
T 1dee_B 125 SAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNE 204 (223)
T ss_dssp BCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCC
T ss_pred CCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCC
Confidence 45666533222334689999999999986 777 999999 887764300 00000112 22577777766 7889
Q ss_pred EEEEEEEeCCcceEEEE
Q psy12421 126 EYKCVATNKHGTDETNC 142 (168)
Q Consensus 126 ~Y~C~a~n~~g~~~~~~ 142 (168)
.|+|.|.|..+......
T Consensus 205 ~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 205 HVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp EEEEEEECTTCCEEEEE
T ss_pred EEEEEEEeCCCCCcccc
Confidence 99999999998766543
No 369
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.02 E-value=6.2e-09 Score=72.70 Aligned_cols=76 Identities=24% Similarity=0.340 Sum_probs=56.7
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EEC---------------CCCCeEEEe-cCCEEEEEEccCC
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--REL---------------SKRDYSMSY-SDGVVSMEIIDCK 120 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~---------------~~~~~~~~~-~~~~~~l~i~~~~ 120 (168)
.+...+....+.+|+++.|.|.+.+.+.+.+.|++.. ..+ ...++.+.. ..+..+|.|.+++
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL 82 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC
Confidence 3445666788999999999999999999999999832 100 012333322 2455689999999
Q ss_pred CCCCeEEEEEEEeC
Q psy12421 121 PEDSGEYKCVATNK 134 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~ 134 (168)
.+|+|.|.|.+.|.
T Consensus 83 ~~D~G~Y~C~~~~~ 96 (245)
T 3nfj_J 83 LSDSGFYLCAWSVS 96 (245)
T ss_dssp GGGCEEEEEEEECC
T ss_pred hhhCEEEEEEEeec
Confidence 99999999999993
No 370
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.02 E-value=2.9e-10 Score=78.30 Aligned_cols=122 Identities=16% Similarity=0.087 Sum_probs=73.5
Q ss_pred CceeEEEEeCCCCCCCCCCccccee-----ccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-e
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVR-----RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-T 88 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~ 88 (168)
.|.+.+++..|.+. |.|...... ......+.+.. ....+|.+........+.+|+.+.|.|.+.|. |.| .
T Consensus 82 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~ 158 (220)
T 1pz5_B 82 YLQMNNLRAEDTGI--YYCTRGGAVGAMDYWGQGTSVTVSS-ATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVT 158 (220)
T ss_dssp EEEECSCCGGGCEE--EEEEEECTTSSEEEECCCEEEEECS-SCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCE
T ss_pred EEEEccCCHHHCEE--EEEEEecCCcccceECCCEEEEEcc-CCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeE
Confidence 46677788888666 433322110 00112222221 12245666654444445789999999999997 888 9
Q ss_pred eEEEeCCEECC---CCCeEEEecC---CEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEE
Q psy12421 89 VKWYKGNRELS---KRDYSMSYSD---GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCV 143 (168)
Q Consensus 89 i~W~~~~~~~~---~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 143 (168)
+.|++++.... .... ...+ ....|.|......| |.|+|.|.|..|....++.
T Consensus 159 v~W~~~~~~~~~~~~~~~--~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 159 VKWNYGALSSGVRTVSSV--LQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp EEEGGGTCCTTEEECCCE--EETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EEEecCCcccceEEcCCc--ccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 99999876310 1100 0010 12358888887766 9999999999997665543
No 371
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.02 E-value=1.3e-09 Score=67.13 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=57.2
Q ss_pred CCeEEecCCcEEEEEEEeccC-CCeeEEEeCCEE--C------------CCCCeEEE--ecCCEEEEEEccCCCCCCeEE
Q psy12421 65 RPRVMQVRQTCKLLCCLSGKP-PPTVKWYKGNRE--L------------SKRDYSMS--YSDGVVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 65 ~~~~~~~g~~~~l~C~~~g~p-~p~i~W~~~~~~--~------------~~~~~~~~--~~~~~~~l~i~~~~~~d~G~Y 127 (168)
....+.+|++++|.|...+.. .+.+.|++.... + ...++.+. ...+..+|.|.+++.+|+|.|
T Consensus 4 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y 83 (110)
T 2q87_A 4 RTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTY 83 (110)
T ss_dssp EEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEE
T ss_pred cEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEE
Confidence 346788999999999987654 468999986421 1 01233332 233456899999999999999
Q ss_pred EEEEEeCC-c-ceEEEEEEEEeeCC
Q psy12421 128 KCVATNKH-G-TDETNCVVIVESEE 150 (168)
Q Consensus 128 ~C~a~n~~-g-~~~~~~~l~v~~~p 150 (168)
.|.+.+.. | .......|.|...|
T Consensus 84 ~C~~~~~~~g~~~~~~~~v~v~V~p 108 (110)
T 2q87_A 84 WCGVDTPWLQDFHDPVVEVEVSVFP 108 (110)
T ss_dssp EEEEECTTSCCBCCCSEEEEEEEC-
T ss_pred EEEEecCccCccCCccEEEEEEEec
Confidence 99999886 5 12233444444433
No 372
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.02 E-value=7.6e-10 Score=77.45 Aligned_cols=75 Identities=23% Similarity=0.372 Sum_probs=53.8
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC------C------------CCCeEEEe--cCCEEEEE
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL------S------------KRDYSMSY--SDGVVSME 115 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~------~------------~~~~~~~~--~~~~~~l~ 115 (168)
+...+....+.+|+++.|.|.+.+.+ .+.+.|+++. ..+ . ..++.... ......|.
T Consensus 130 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 209 (247)
T 1svz_A 130 QLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQ 209 (247)
T ss_dssp EEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEE
T ss_pred EEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEE
Confidence 33444556789999999999999874 5799999863 110 0 12333322 23445899
Q ss_pred EccCCCCCCeEEEEEEEeC
Q psy12421 116 IIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~ 134 (168)
|.+++.+|+|.|.|.+.|.
T Consensus 210 I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 210 INNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp ECSCCGGGCEEEEEEEEEG
T ss_pred ECCCChhHCEEEEEEEecc
Confidence 9999999999999999995
No 373
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.01 E-value=1.2e-09 Score=74.80 Aligned_cols=85 Identities=15% Similarity=0.152 Sum_probs=59.1
Q ss_pred cCCeEEecCCcEEEEEEE-eccC-CCeeEEEeCC--EEC-------------CCCCeEEEecCCEEEEEEccCCCCCCeE
Q psy12421 64 LRPRVMQVRQTCKLLCCL-SGKP-PPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGE 126 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~-~g~p-~p~i~W~~~~--~~~-------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 126 (168)
+....+.+|+++.|.|.+ .+.+ .+.+.|++++ ..+ ...++......+...|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 455678899999999995 4443 6899999853 111 0224444444556689999999999999
Q ss_pred EEEEEEeCCc-c-eEEEEEEEEee
Q psy12421 127 YKCVATNKHG-T-DETNCVVIVES 148 (168)
Q Consensus 127 Y~C~a~n~~g-~-~~~~~~l~v~~ 148 (168)
|.|.+.|..+ . ......|.|..
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~ 110 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKR 110 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECC
T ss_pred EEEEEEeCCCcceECCCEEEEEcC
Confidence 9999999876 1 22234566643
No 374
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.00 E-value=2.2e-09 Score=75.81 Aligned_cols=88 Identities=23% Similarity=0.305 Sum_probs=61.9
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC------------------CCCCeEEEec--CCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL------------------SKRDYSMSYS--DGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~------------------~~~~~~~~~~--~~~~~l~i~~ 118 (168)
.+....+.+|++++|.|.+.+.| .+.+.|+++. ..+ ...++.+... .+..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 45567888999999999998875 6899999842 111 0133333322 3456899999
Q ss_pred CCCCCCeEEEEEEEeCCcc-----eEEEEEEEEeeCC
Q psy12421 119 CKPEDSGEYKCVATNKHGT-----DETNCVVIVESEE 150 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~v~~~p 150 (168)
++.+|+|.|.|.+.|..|. ......|.|...+
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~ 122 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDI 122 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCC
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeecccc
Confidence 9999999999999998763 1223466665443
No 375
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.00 E-value=7.7e-10 Score=75.52 Aligned_cols=84 Identities=17% Similarity=0.211 Sum_probs=56.0
Q ss_pred CeEEecCCcEEEEEEEeccCCCe---eEEEeCCEECC-----------------CCCeEE-------EecCCEEEEEEcc
Q psy12421 66 PRVMQVRQTCKLLCCLSGKPPPT---VKWYKGNRELS-----------------KRDYSM-------SYSDGVVSMEIID 118 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g~p~p~---i~W~~~~~~~~-----------------~~~~~~-------~~~~~~~~l~i~~ 118 (168)
...+.+|+++.|.|.+.+.+.+. +.|+|++..+. ..+... ....+..+|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 35577899999999999877764 78999764221 000000 0011223699999
Q ss_pred CCCCCCeEEEEEEEeCCcceEEEE-EEEEeeC
Q psy12421 119 CKPEDSGEYKCVATNKHGTDETNC-VVIVESE 149 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~~~~~-~l~v~~~ 149 (168)
++.+|+|.|.|.+.|..|...... .+.+..+
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~ 121 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQ 121 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeeecC
Confidence 999999999999999877654433 3444433
No 376
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.00 E-value=3.6e-10 Score=85.48 Aligned_cols=127 Identities=15% Similarity=0.167 Sum_probs=76.1
Q ss_pred CceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-eeEEEe
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-TVKWYK 93 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~W~~ 93 (168)
.|.+.+++..|.|.|.+...+..........+.+.. ....+|.+........+..|+.+.|.|.+.|. |.| .+.|++
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k 157 (434)
T 1igy_B 79 NIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSS-AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 157 (434)
T ss_dssp CEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECC-SCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETT
T ss_pred EEEECCCChHHCEEEEEEEEccccccCCceEEEEcc-CCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEee
Confidence 577889999997775443322111111222232221 11234555443333345789999999999986 776 999999
Q ss_pred CCEECCCCCe-EEEecCC---EEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 94 GNRELSKRDY-SMSYSDG---VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 94 ~~~~~~~~~~-~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
++..+..... .....+. ...|.|..+...| |.|+|.|.|..|.......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~ 211 (434)
T 1igy_B 158 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKI 211 (434)
T ss_dssp TTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEEC
T ss_pred CCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeec
Confidence 9864311000 0000010 1258898998888 99999999999885544444
No 377
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=99.00 E-value=1.7e-08 Score=60.59 Aligned_cols=82 Identities=21% Similarity=0.332 Sum_probs=61.2
Q ss_pred eEEecCCcEEEEEEEec-cCCCeeEEEeCC----EECCCCCeEEEecCC--EEEEEEccCCCCCCeEEEEEEEeCCcce-
Q psy12421 67 RVMQVRQTCKLLCCLSG-KPPPTVKWYKGN----RELSKRDYSMSYSDG--VVSMEIIDCKPEDSGEYKCVATNKHGTD- 138 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g-~p~p~i~W~~~~----~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~a~n~~g~~- 138 (168)
..+..|+.+.|.|++.+ .+.|.+.|-|-+ ..|..........+. ...|.+..+..+|+|.|.|.|++..|..
T Consensus 21 hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg~ie 100 (120)
T 2aw2_A 21 HSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIE 100 (120)
T ss_dssp EEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSCEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ceEecCCeEEEEccEEeccCCCceEEEecCCceEEECccccccceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCCcEE
Confidence 56889999999999999 689999998855 455543322222222 3368899999999999999999999875
Q ss_pred EEEEEEEEee
Q psy12421 139 ETNCVVIVES 148 (168)
Q Consensus 139 ~~~~~l~v~~ 148 (168)
+.+..|.|.+
T Consensus 101 SHsvtI~Vt~ 110 (120)
T 2aw2_A 101 SHSTTLYVTD 110 (120)
T ss_dssp CCCEEEEEEC
T ss_pred eeEEEEEEEe
Confidence 4455666653
No 378
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.00 E-value=2.8e-09 Score=73.74 Aligned_cols=86 Identities=19% Similarity=0.278 Sum_probs=60.6
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC------------------CCCCeEEEec--CCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL------------------SKRDYSMSYS--DGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~------------------~~~~~~~~~~--~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++. ..+ ...++.+... .+..+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (225)
T 1op3_H 6 ESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHK 85 (225)
T ss_dssp EECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECC
Confidence 34557788999999999998876 7889999853 111 0123333322 3456899999
Q ss_pred CCCCCCeEEEEEEEeCCc-----c---eEEEEEEEEee
Q psy12421 119 CKPEDSGEYKCVATNKHG-----T---DETNCVVIVES 148 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g-----~---~~~~~~l~v~~ 148 (168)
++.+|+|.|.|.+.|..| . ......|.|..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~ 123 (225)
T 1op3_H 86 MRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSP 123 (225)
T ss_dssp CCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEES
T ss_pred CChhhCEEEEEEEecCCCccccccceeecCCEEEeccc
Confidence 999999999999999865 2 11234677765
No 379
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.00 E-value=4.5e-09 Score=64.59 Aligned_cols=74 Identities=26% Similarity=0.434 Sum_probs=54.4
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--E----ECC-CCCeEEEe--cCCEEEEEEccCCCCCCeEEE
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--R----ELS-KRDYSMSY--SDGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~----~~~-~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~ 128 (168)
+...+....+.+|+++.|.|.+.+.+ .+.+.||++. . .+. ..++.... ..+..+|.|.+++.+|+|.|.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 82 (108)
T 2coq_A 3 VDQTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYK 82 (108)
T ss_dssp EEEECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred eEeCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEE
Confidence 34556677889999999999998753 5789999863 2 121 13443322 245668999999999999999
Q ss_pred EEEEe
Q psy12421 129 CVATN 133 (168)
Q Consensus 129 C~a~n 133 (168)
|.+.|
T Consensus 83 C~~~~ 87 (108)
T 2coq_A 83 CKAYR 87 (108)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99987
No 380
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.00 E-value=4e-09 Score=72.31 Aligned_cols=88 Identities=20% Similarity=0.323 Sum_probs=63.0
Q ss_pred CCeEEecCCcEEEEEEEeccCC-----CeeEEEeCCEEC---------CC-------CCeEEEe---cCCEEEEEEccCC
Q psy12421 65 RPRVMQVRQTCKLLCCLSGKPP-----PTVKWYKGNREL---------SK-------RDYSMSY---SDGVVSMEIIDCK 120 (168)
Q Consensus 65 ~~~~~~~g~~~~l~C~~~g~p~-----p~i~W~~~~~~~---------~~-------~~~~~~~---~~~~~~l~i~~~~ 120 (168)
....+.+|+++.|.|.+.+.|. +.+.|++++..+ .. .+..+.. ..+..+|.|.+++
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 88 (222)
T 3sbw_C 9 DLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVK 88 (222)
T ss_dssp SEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCC
T ss_pred ccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcc
Confidence 3456789999999999887773 489999975322 10 1111111 1245589999999
Q ss_pred CCCCeEEEEEEEeCCcceEEEEEEEEeeCCCch
Q psy12421 121 PEDSGEYKCVATNKHGTDETNCVVIVESEEESK 153 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~ 153 (168)
.+|+|.|.|.+.| .|.....+.|.|..++..+
T Consensus 89 ~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~ 120 (222)
T 3sbw_C 89 LQDAGVYRCMISY-GGADYKRITVKVNAPYNKI 120 (222)
T ss_dssp GGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCC
T ss_pred cccCeEEEEEEEe-CCCceeEEEEEEECCCCCC
Confidence 9999999999999 6667777888888665443
No 381
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.00 E-value=4.8e-09 Score=71.91 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=59.8
Q ss_pred ecCCeEEecCCcEEEEEEEecc--CCCeeEEEeCCE-----EC--------------CCCCeEEEecCCEEEEEEccCCC
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKGNR-----EL--------------SKRDYSMSYSDGVVSMEIIDCKP 121 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~~-----~~--------------~~~~~~~~~~~~~~~l~i~~~~~ 121 (168)
.+....+.+|+++.|.|.+.+. +.+.+.|++... .+ ...++.+....+..+|.|.+++.
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 4556788899999999999873 467899997421 11 01334444445566799999999
Q ss_pred CCCeEEEEEEEeCCcc----eEEEEEEEEe
Q psy12421 122 EDSGEYKCVATNKHGT----DETNCVVIVE 147 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~----~~~~~~l~v~ 147 (168)
+|+|.|.|.+.|..+. ......|.|.
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~ 114 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVS 114 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEEC
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEe
Confidence 9999999999988652 2223456665
No 382
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.00 E-value=2.7e-09 Score=67.20 Aligned_cols=86 Identities=17% Similarity=0.213 Sum_probs=56.7
Q ss_pred cCCeEEecCCcEEEEEEEeccCCC---eeEEEeCCEECCC-------------------CCeEEEe---cCCEEEEEEcc
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPP---TVKWYKGNRELSK-------------------RDYSMSY---SDGVVSMEIID 118 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p---~i~W~~~~~~~~~-------------------~~~~~~~---~~~~~~l~i~~ 118 (168)
+....+.+|+++.|.|.+.+.+.. .+.|+|....... .+..+.. ..+..+|.|.+
T Consensus 7 p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~ 86 (123)
T 4gjt_B 7 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 86 (123)
T ss_dssp CSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEES
T ss_pred CCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECC
Confidence 334567789999999998775543 5789986421110 0111110 11234699999
Q ss_pred CCCCCCeEEEEEEEe-CCcceEEEEEEEEeeC
Q psy12421 119 CKPEDSGEYKCVATN-KHGTDETNCVVIVESE 149 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n-~~g~~~~~~~l~v~~~ 149 (168)
++.+|+|.|.|.+.+ ..|.......|.|.+.
T Consensus 87 v~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE~ 118 (123)
T 4gjt_B 87 AVQADEGEYECRVSTFPAGSFQARLRLRVLEH 118 (123)
T ss_dssp CCSSSCSEEEEEEEESSSCEEEEEEEEEC---
T ss_pred CChHHCEEEEEEEEECCCCeEEeEEEEEEEEC
Confidence 999999999998876 5677777888888654
No 383
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.00 E-value=6.7e-10 Score=73.95 Aligned_cols=109 Identities=16% Similarity=0.182 Sum_probs=66.8
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccceeccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEe
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYK 93 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~ 93 (168)
...|.+.+++..|.|. |.+..........+.+.+. .....|.+..... ...|.|.+.+.|.|.+.|++
T Consensus 59 ~~sL~I~~v~~~DsG~--Y~C~~~n~~~~~~~~L~V~--~~~~~p~i~~~~~--------~~~L~C~~~~~p~p~i~W~~ 126 (171)
T 1ccz_A 59 SGSLTIYNLTSSDEDE--YEMESPNITDTMKFFLYVL--EMVSKPMIYWECS--------NATLTCEVLEGTDVELKLYQ 126 (171)
T ss_dssp TCCEEECSCCGGGCEE--EEEECTTCCSCEEEEEEEE--CCCCCCEEEEETT--------TTEEEEECSSCSSCEEEEEE
T ss_pred CCeEEECCCChhhCce--EEEEEeCCCCcEEEEEEEE--CcCCCCEEEEecC--------CcEEEEEeCCCCCcEEEEEE
Confidence 3567788888888776 4333222111112222222 1122355543222 13799999999999999999
Q ss_pred CCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 94 GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
++..+... ... .+.+. ...|.|.|+|.|.|..|.......|
T Consensus 127 ~~~~l~~~------~~~--~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 127 GKEHLRSL------RQK--TMSYQ--WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp TTEEEEEE------SSS--EEEEE--CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred CCEECcCC------cce--EEEEe--ccCCCceEEEEEEcccCcccceeEE
Confidence 99876531 111 33333 3678899999999999987766544
No 384
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.00 E-value=2.3e-09 Score=66.54 Aligned_cols=75 Identities=19% Similarity=0.240 Sum_probs=55.7
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC------CCeeEEEeCC--E---EC----------CCCCeEEEecCCEEEEEEcc
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP------PPTVKWYKGN--R---EL----------SKRDYSMSYSDGVVSMEIID 118 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p------~p~i~W~~~~--~---~~----------~~~~~~~~~~~~~~~l~i~~ 118 (168)
+...+....+.+|+++.|.|.+.+.+ .+.+.||+.. . .+ ...++......+..+|.|.+
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 83 (114)
T 1eeq_A 4 LTQSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISS 83 (114)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred eEecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECC
Confidence 44556677899999999999998766 3789999853 1 11 02344444345566899999
Q ss_pred CCCCCCeEEEEEEEeC
Q psy12421 119 CKPEDSGEYKCVATNK 134 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~ 134 (168)
++.+|+|.|.|.+.+.
T Consensus 84 v~~~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 84 LQAEDVAVYYCQQYYS 99 (114)
T ss_dssp CCGGGCEEEEEEECSS
T ss_pred CCcccCEEEEEEEeeC
Confidence 9999999999999875
No 385
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.99 E-value=5e-09 Score=73.28 Aligned_cols=77 Identities=16% Similarity=0.347 Sum_probs=56.3
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEecc--CCCeeEEEeCC--EEC------------------CCCCeEEEecC--CEEE
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKGN--REL------------------SKRDYSMSYSD--GVVS 113 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~--~~~------------------~~~~~~~~~~~--~~~~ 113 (168)
+.+...+....+.+|+++.|.|.+.+. +.+.+.|+++. ..+ ...++.+.... +..+
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTST 81 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEE
Confidence 345555667788999999999999885 67899999843 111 12333333222 4568
Q ss_pred EEEccCCCCCCeEEEEEEEeC
Q psy12421 114 MEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 114 l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
|.|.+++.+|+|.|.|.+.+.
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~~ 102 (242)
T 1hxm_B 82 LTIHNVEKQDIATYYCALWEA 102 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEEE
T ss_pred EEECCCCcccCEEEEEeeecC
Confidence 999999999999999999986
No 386
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.99 E-value=6.2e-09 Score=66.63 Aligned_cols=94 Identities=16% Similarity=0.173 Sum_probs=64.4
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC---CEEC-----CCCCeEEEecCCEEEEEEccCCCCCCeEEEEE
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG---NREL-----SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCV 130 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~---~~~~-----~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 130 (168)
.+...+....+.+|++++|.|...+. ...+.||+. +..+ ...++..........|.|.+++.+|+|.|.|.
T Consensus 20 ~v~Q~p~~~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~ 98 (134)
T 3kg5_A 20 RIWQSPRFIARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQ 98 (134)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEECSSEEEEEECSCCTTTCEEEEEE
T ss_pred EEEEeCCEEEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEccCCEEEEEECCCCcCcCEEEEEE
Confidence 44556667889999999999998765 578999987 3222 12455554455567899999999999999999
Q ss_pred EEeCCc-c--eEEEEEEEEeeCCCch
Q psy12421 131 ATNKHG-T--DETNCVVIVESEEESK 153 (168)
Q Consensus 131 a~n~~g-~--~~~~~~l~v~~~p~~~ 153 (168)
+.+..+ . .-....|.|...|...
T Consensus 99 ~~~~~~~~~~fg~GT~L~V~~~p~~~ 124 (134)
T 3kg5_A 99 QKCNNTSEVYQGCGTELRVMGFSTLA 124 (134)
T ss_dssp EECTTTCCEEECCCEEEEEECC----
T ss_pred EEcCCCCceEECCCEEEEEecCCCHH
Confidence 987632 1 1123467776655443
No 387
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.99 E-value=1.8e-09 Score=73.76 Aligned_cols=84 Identities=20% Similarity=0.318 Sum_probs=57.9
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC-----------------CCCCeEEEe--cCCEEEEEEccC
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL-----------------SKRDYSMSY--SDGVVSMEIIDC 119 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~-----------------~~~~~~~~~--~~~~~~l~i~~~ 119 (168)
.+....+.+|+++.|.|.+.+.| .+.+.|+++. ..+ ...++.+.. ..+..+|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 85 (210)
T 3d9a_H 6 ESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSV 85 (210)
T ss_dssp EESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCC
Confidence 35567888999999999999865 4899999852 111 123333332 224558999999
Q ss_pred CCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 120 KPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
+.+|+|.|.|.+.|.. .......|.|.
T Consensus 86 ~~~D~G~Y~C~~~~~~-~~~~~~~l~V~ 112 (210)
T 3d9a_H 86 TTEDTATYYCANWDGD-YWGQGTLVTVS 112 (210)
T ss_dssp CGGGCEEEEEEETTSS-CBCCCEEEEEC
T ss_pred CcccCEEEEEEEecCc-ccccceEEEec
Confidence 9999999999999864 11122455555
No 388
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.98 E-value=7.6e-09 Score=65.51 Aligned_cols=78 Identities=23% Similarity=0.334 Sum_probs=57.3
Q ss_pred eEEeecCCeEEecCCcEEEEEEEecc--CCCeeEEEeC--CEE----CC-CCCeEEEe--cCCEEEEEEccCCCCCCeEE
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKG--NRE----LS-KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~--~~~----~~-~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y 127 (168)
.+.+.+....+.+|++++|.|...+. +.+.+.||++ +.. +. ..++.... ......|.|.+++.+|+|.|
T Consensus 2 ~V~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y 81 (126)
T 3moq_A 2 WVDQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTY 81 (126)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred ceEECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEE
Confidence 45566777889999999999999875 5678999984 221 11 12333322 23466899999999999999
Q ss_pred EEEEEeCCc
Q psy12421 128 KCVATNKHG 136 (168)
Q Consensus 128 ~C~a~n~~g 136 (168)
.|.+.+..+
T Consensus 82 ~C~~~~~~~ 90 (126)
T 3moq_A 82 KCQAFYVFF 90 (126)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEcCC
Confidence 999988654
No 389
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.98 E-value=1e-09 Score=75.76 Aligned_cols=83 Identities=13% Similarity=0.194 Sum_probs=57.0
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEecc-CC--CeeEEEeCCEECCC-CCeEEEecCCE----EEEEEccCCCCCCeEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PP--PTVKWYKGNRELSK-RDYSMSYSDGV----VSMEIIDCKPEDSGEY 127 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~--p~i~W~~~~~~~~~-~~~~~~~~~~~----~~l~i~~~~~~d~G~Y 127 (168)
.+|.+.... ...+..|+.+.|.|.+.+. |. +.+.|++++..+.. ........++. +.|.|......|.|.|
T Consensus 122 ~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~y 200 (220)
T 2fbj_H 122 RNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESV 200 (220)
T ss_dssp BCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEE
T ss_pred CCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeE
Confidence 456665444 3345689999999999986 76 79999999865411 00001112221 2488888888899999
Q ss_pred EEEEEeCCcceE
Q psy12421 128 KCVATNKHGTDE 139 (168)
Q Consensus 128 ~C~a~n~~g~~~ 139 (168)
+|.|.|..|..+
T Consensus 201 tC~v~n~~~~~~ 212 (220)
T 2fbj_H 201 KCSVQHDSNPVQ 212 (220)
T ss_dssp EEEEEETTSCCE
T ss_pred EEEEEcCCCceE
Confidence 999999988755
No 390
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.98 E-value=2e-09 Score=66.25 Aligned_cols=71 Identities=23% Similarity=0.354 Sum_probs=52.6
Q ss_pred cCCeEEecCCcEEEEEE-EeccC-CCeeEEEeCCEEC-------------CCCCeEEE--ecCCEEEEEEccCCCCCCeE
Q psy12421 64 LRPRVMQVRQTCKLLCC-LSGKP-PPTVKWYKGNREL-------------SKRDYSMS--YSDGVVSMEIIDCKPEDSGE 126 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~-~~g~p-~p~i~W~~~~~~~-------------~~~~~~~~--~~~~~~~l~i~~~~~~d~G~ 126 (168)
+....+.+|++++|.|. +.+.+ .+.+.|++....+ ...++... ...+..+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~ 86 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEAD 86 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEE
Confidence 55677889999999999 77665 5789999976211 01334443 33446689999999999999
Q ss_pred EEEEEEeC
Q psy12421 127 YKCVATNK 134 (168)
Q Consensus 127 Y~C~a~n~ 134 (168)
|.|.+.+.
T Consensus 87 Y~C~~~~~ 94 (109)
T 1pew_A 87 YYCQSYDA 94 (109)
T ss_dssp EEEEEEET
T ss_pred EEEEEEeC
Confidence 99999875
No 391
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.98 E-value=6e-10 Score=78.08 Aligned_cols=76 Identities=18% Similarity=0.265 Sum_probs=54.7
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeC--CEECC------------------CCCeEEEe--cCCEEE
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKG--NRELS------------------KRDYSMSY--SDGVVS 113 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~--~~~~~------------------~~~~~~~~--~~~~~~ 113 (168)
+.+...+....+.+|+++.|.|.+.+.+ .+.+.|+++ +..+. ..++.+.. .....+
T Consensus 132 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 211 (250)
T 3esu_F 132 EVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAY 211 (250)
T ss_dssp ---CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEE
T ss_pred ceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEE
Confidence 3444566677899999999999998877 889999997 32220 12233221 134457
Q ss_pred EEEccCCCCCCeEEEEEEEe
Q psy12421 114 MEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 114 l~i~~~~~~d~G~Y~C~a~n 133 (168)
|.|.+++.+|+|.|.|.+.+
T Consensus 212 L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 212 MQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEECSCCGGGCEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEec
Confidence 99999999999999999997
No 392
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.98 E-value=1.8e-09 Score=75.53 Aligned_cols=78 Identities=19% Similarity=0.290 Sum_probs=54.6
Q ss_pred EeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC-----------------CCCCeEEEe--cCCEEEEEEc
Q psy12421 61 TFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL-----------------SKRDYSMSY--SDGVVSMEII 117 (168)
Q Consensus 61 ~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~-----------------~~~~~~~~~--~~~~~~l~i~ 117 (168)
...+....+.+|+++.|.|.+.+.| .+.+.|+++. ..+ ...++.+.. .....+|.|.
T Consensus 126 ~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 205 (242)
T 2znx_A 126 LQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLN 205 (242)
T ss_dssp EEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEEC
T ss_pred eecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEEC
Confidence 3344456689999999999999875 5789999852 211 012333322 2334579999
Q ss_pred cCCCCCCeEEEEEEEeC--Ccce
Q psy12421 118 DCKPEDSGEYKCVATNK--HGTD 138 (168)
Q Consensus 118 ~~~~~d~G~Y~C~a~n~--~g~~ 138 (168)
+++.+|+|.|.|.|.|. +|..
T Consensus 206 ~v~~~D~G~Y~C~a~~~~~fG~g 228 (242)
T 2znx_A 206 SVTTEDTATYYCANXDGDYXGQG 228 (242)
T ss_dssp SCCGGGCEEEEEEETTSSCBCCC
T ss_pred CCCcCcCEEEEEeccCCcccCCC
Confidence 99999999999999984 4443
No 393
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.97 E-value=9.2e-10 Score=77.60 Aligned_cols=127 Identities=14% Similarity=0.178 Sum_probs=73.8
Q ss_pred ceeEEEEeCCCCCCCCCCcccce------eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEec-cCCC-e
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQV------RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPP-T 88 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p-~ 88 (168)
|.+.+++..|.+. |.|..... .......+.+.. ....+|.+........+..|+.+.|.|.+.| .|.+ .
T Consensus 81 L~I~~v~~~DsG~--Y~C~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 157 (253)
T 3liz_H 81 LQMSSLKSEDTAM--YYCTRDPAGRAWFAYWGQGTLVTVSA-AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVT 157 (253)
T ss_dssp EEECSCCGGGCEE--EEEEECCBTTTBCCEECCCEEEEECS-SCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCE
T ss_pred EEECCCChhhCEE--EEEEEecCCcceeeEECCCEEEEEec-cCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeE
Confidence 5666777788666 43332211 001112222221 2335677765544455667999999999998 6766 8
Q ss_pred eEEEeCCEECCCCCe-EEEecC---CEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 89 VKWYKGNRELSKRDY-SMSYSD---GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 89 i~W~~~~~~~~~~~~-~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
+.|++++........ .....+ ....|.|......| |.|+|.+.|..+.......|.+.
T Consensus 158 v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 158 VTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp EEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred EEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 999998863311000 001111 01368899998889 99999999998887776666554
No 394
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.97 E-value=8.5e-09 Score=71.08 Aligned_cols=86 Identities=19% Similarity=0.269 Sum_probs=60.4
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--E---EC---------------CCCCeEEEec--CCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--R---EL---------------SKRDYSMSYS--DGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~---~~---------------~~~~~~~~~~--~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++. . .+ ...++.+... .+..+|.|.+
T Consensus 6 q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (220)
T 2fbj_H 6 ESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSK 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECS
T ss_pred cCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECC
Confidence 34567888999999999998865 6889999853 1 11 0123443322 3456899999
Q ss_pred CCCCCCeEEEEEEEeCCcc---eEEEEEEEEee
Q psy12421 119 CKPEDSGEYKCVATNKHGT---DETNCVVIVES 148 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~---~~~~~~l~v~~ 148 (168)
++.+|+|.|.|.+.|..+. ......|.|..
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 118 (220)
T 2fbj_H 86 VRSEDTALYYCARLHYYGYNAYWGQGTLVTVSA 118 (220)
T ss_dssp CCGGGCEEEEEEEEETTTEEEEECCCEEEEECS
T ss_pred CChhhCEEEEEEEeccccccceecCCEEEEecC
Confidence 9999999999999997553 11234677764
No 395
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.97 E-value=1.4e-09 Score=73.21 Aligned_cols=81 Identities=17% Similarity=0.273 Sum_probs=60.2
Q ss_pred CeEEecCCcEEEEEEEe--ccCCCeeEEEe--CCEEC-----------CCCCeEEEecCCEEEEEEccCCCCCCeEEEEE
Q psy12421 66 PRVMQVRQTCKLLCCLS--GKPPPTVKWYK--GNREL-----------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCV 130 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~--g~p~p~i~W~~--~~~~~-----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 130 (168)
.....+|+.+.|.|... +.+.+.+.|++ ++..+ ...++. ...++ +|.|.+++..|+|.|+|.
T Consensus 8 ~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~-~~~ng--sL~I~~v~~~DsG~Y~c~ 84 (182)
T 1hnf_A 8 ETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK-LFKNG--TLKIKHLKTDDQDIYKVS 84 (182)
T ss_dssp EEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEE-ECTTS--CEEECSCCGGGCEEEEEE
T ss_pred EEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEE-ECCCC--CEEECCCChhhCEEEEEE
Confidence 35677899999999532 35578999999 87655 123333 33555 799999999999999999
Q ss_pred EEeCCcceE--EEEEEEEeeC
Q psy12421 131 ATNKHGTDE--TNCVVIVESE 149 (168)
Q Consensus 131 a~n~~g~~~--~~~~l~v~~~ 149 (168)
+.|..|... ..+.|.|.++
T Consensus 85 ~~n~~g~~~~~~~~~L~V~~~ 105 (182)
T 1hnf_A 85 IYDTKGKNVLEKIFDLKIQER 105 (182)
T ss_dssp EEETTSCEEEEEEEEEEEECC
T ss_pred EEeCCCceeEEEEEEEEEcCc
Confidence 999988753 4566777654
No 396
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.97 E-value=4.6e-09 Score=73.09 Aligned_cols=129 Identities=15% Similarity=0.154 Sum_probs=71.5
Q ss_pred CceeEEEEeCCCCCCCCCCccccee--------ccCcceeeEeeecccCCCeEEeecCCeEEecC-CcEEEEEEEecc-C
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVR--------RREPLQITFWQETVESAPNFTFLLRPRVMQVR-QTCKLLCCLSGK-P 85 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g-~~~~l~C~~~g~-p 85 (168)
.|.+.+++..|.+. |.|...... ......+.+.. ....+|.+........+..| +.+.|.|.+.|. |
T Consensus 79 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~~~~L~V~~-~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P 155 (232)
T 1dn0_B 79 SLKLSSVTAADTAV--YYCARPPHDTSGHYWNYWGQGTLVTVSS-GSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLP 155 (232)
T ss_dssp EEEECSCCGGGCEE--EEEEECSSTTSCSCCSEECCCEEEEECS-SCCBCCEEEEEECC------CCSEEEEEEEEEEBS
T ss_pred EEEECCCCcccCEE--EEEEEecCCcCCchhhhcccceEEEEcc-CCCCCCceEEeccccccCCCCCcEEEEEEEEEEeC
Confidence 46677778888666 433322100 01112222221 12234665533222334577 899999999986 7
Q ss_pred CC-eeEEEe-CCEECCCCC-eEEEecCC----EEEEEEccCCC--CCCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 86 PP-TVKWYK-GNRELSKRD-YSMSYSDG----VVSMEIIDCKP--EDSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 86 ~p-~i~W~~-~~~~~~~~~-~~~~~~~~----~~~l~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
.| .+.|++ ++..+.... ......++ ...|.|..... .|.|.|+|.+.|..+.......+.+.
T Consensus 156 ~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 156 DSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp SCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred CCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 76 999999 887664300 00000112 22578888776 78999999999999887666655544
No 397
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.96 E-value=1.8e-09 Score=76.68 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=64.8
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccC-----CCeeEEEeCC--EEC-------------CCCCeEEEecCCEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKP-----PPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSME 115 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p-----~p~i~W~~~~--~~~-------------~~~~~~~~~~~~~~~l~ 115 (168)
..+.+...+....+.+|+++.|.|.+.+.+ .+.+.|+++. ..+ ...++......+..+|.
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 345666677778889999999999998877 5899999853 111 12344444445556899
Q ss_pred EccCCCCCCeEEEEEEEeCCcce-EEEEEEEEeeC
Q psy12421 116 IIDCKPEDSGEYKCVATNKHGTD-ETNCVVIVESE 149 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 149 (168)
|.+++.+|+|.|.|.+.|..+.. .....|.|...
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 128 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSS 128 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC----
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccC
Confidence 99999999999999999875432 22345556543
No 398
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.96 E-value=2.7e-09 Score=74.47 Aligned_cols=75 Identities=20% Similarity=0.357 Sum_probs=55.0
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC--------------CEECC-----CCCeEEEe-cCCEEEEEEc
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG--------------NRELS-----KRDYSMSY-SDGVVSMEII 117 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~--------------~~~~~-----~~~~~~~~-~~~~~~l~i~ 117 (168)
+.+...+....+.+|+++.|.| ..+.+.+.+.|++. +.... ..++.+.. ..+..+|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 3455566678899999999999 66888999999982 21111 13443332 2335589999
Q ss_pred cCCCCCCeEEEEEEEe
Q psy12421 118 DCKPEDSGEYKCVATN 133 (168)
Q Consensus 118 ~~~~~d~G~Y~C~a~n 133 (168)
+++.+|+|.|.|.+.+
T Consensus 82 ~v~~~D~G~Y~C~~~~ 97 (245)
T 4ei6_B 82 PTALEDSAVYFCASSF 97 (245)
T ss_dssp SCCGGGCEEEEEEEEC
T ss_pred CCCHhHCEEEEEEEcc
Confidence 9999999999999996
No 399
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.96 E-value=3e-10 Score=86.41 Aligned_cols=90 Identities=17% Similarity=0.221 Sum_probs=61.3
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEecc-CC-CeeEEEeCCEECCCCCeE-EEecCC----EEEEEEccCCCCCCeEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PP-PTVKWYKGNRELSKRDYS-MSYSDG----VVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~~~~~~~~~~~~~-~~~~~~----~~~l~i~~~~~~d~G~Y~ 128 (168)
.+|.+........+.+|+.+.|.|.+.|. |. +.+.|++++..+...... ....++ ...|.|.++...| |.|+
T Consensus 131 ~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~ 209 (457)
T 1hzh_H 131 KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYI 209 (457)
T ss_dssp BCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCE
T ss_pred CCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEE
Confidence 35666554444456789999999999986 64 899999998654211111 111222 1268899998889 9999
Q ss_pred EEEEeCCcceEEEEEEEE
Q psy12421 129 CVATNKHGTDETNCVVIV 146 (168)
Q Consensus 129 C~a~n~~g~~~~~~~l~v 146 (168)
|.|.|..+.......+.+
T Consensus 210 C~a~n~~~~~~~~~~v~~ 227 (457)
T 1hzh_H 210 CNVNHKPSNTKVDKKAEP 227 (457)
T ss_dssp EEEEEGGGTEEEEEECCC
T ss_pred EEEEeCCCCcceeEEecc
Confidence 999998877655554443
No 400
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.95 E-value=5.6e-09 Score=66.42 Aligned_cols=92 Identities=13% Similarity=0.203 Sum_probs=59.5
Q ss_pred EeecCCeEEecCCcEEEEEEEe-------ccCCCeeEEEeCCEE------CC------------CCCeEEEe--cCCEEE
Q psy12421 61 TFLLRPRVMQVRQTCKLLCCLS-------GKPPPTVKWYKGNRE------LS------------KRDYSMSY--SDGVVS 113 (168)
Q Consensus 61 ~~~~~~~~~~~g~~~~l~C~~~-------g~p~p~i~W~~~~~~------~~------------~~~~~~~~--~~~~~~ 113 (168)
...+....+.+|+++.|.|... ......+.|++.... +. ..++.+.. ..+..+
T Consensus 10 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 89 (132)
T 1nko_A 10 LTMQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCT 89 (132)
T ss_dssp EEECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCC
T ss_pred EeCCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceE
Confidence 3456667889999999999987 345678999986531 10 02222221 123457
Q ss_pred EEEccCCCCCCeEEEEEEEeCCcce---EEEEEEEEeeCCCc
Q psy12421 114 MEIIDCKPEDSGEYKCVATNKHGTD---ETNCVVIVESEEES 152 (168)
Q Consensus 114 l~i~~~~~~d~G~Y~C~a~n~~g~~---~~~~~l~v~~~p~~ 152 (168)
|.|.+++.+|+|.|.|.+.+..... .....|.|..++..
T Consensus 90 L~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~~l~V~~~~~~ 131 (132)
T 1nko_A 90 LSIRDARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTALTHR 131 (132)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEECTTSCEEEEEECCC--
T ss_pred EEEcccCcccCeeEEEEEEcCCCcccccCCceEEEecccCCC
Confidence 9999999999999999998754211 12456677665543
No 401
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.94 E-value=2.4e-10 Score=80.38 Aligned_cols=83 Identities=22% Similarity=0.328 Sum_probs=57.1
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-eeEEEeCCEECCCC-CeEE---EecCC----EEEEEEccCCCCCCe
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-TVKWYKGNRELSKR-DYSM---SYSDG----VVSMEIIDCKPEDSG 125 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~W~~~~~~~~~~-~~~~---~~~~~----~~~l~i~~~~~~d~G 125 (168)
.+|.+........+..|+.+.|.|.+.|. |.+ .+.|++++..+... .... ...++ ...|.|..+...|.|
T Consensus 149 ~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g 228 (252)
T 3bkj_L 149 AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHN 228 (252)
T ss_dssp BCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCC
T ss_pred cCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCC
Confidence 45776654444334468899999999984 443 79999999877543 1100 01122 135889999899999
Q ss_pred EEEEEEEeCCcce
Q psy12421 126 EYKCVATNKHGTD 138 (168)
Q Consensus 126 ~Y~C~a~n~~g~~ 138 (168)
.|+|.|.|.....
T Consensus 229 ~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 229 SYTCEATHKTSTS 241 (252)
T ss_dssp EEEEEEECTTCSS
T ss_pred eEEEEEEeCCCCC
Confidence 9999999986554
No 402
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.94 E-value=3.9e-09 Score=66.14 Aligned_cols=87 Identities=16% Similarity=0.134 Sum_probs=55.8
Q ss_pred cCCeEEecCCcEEEEEEEecc----CCCeeEEEeCCE-------ECC--------------CCCeEEEe--cCCEEEEEE
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGK----PPPTVKWYKGNR-------ELS--------------KRDYSMSY--SDGVVSMEI 116 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~----p~p~i~W~~~~~-------~~~--------------~~~~~~~~--~~~~~~l~i 116 (168)
+....+.+|+++.|.|.+... +.+.+.|++++. .+. ..+..+.. ..+..+|.|
T Consensus 6 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (124)
T 1neu_A 6 DREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVI 85 (124)
T ss_dssp CSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEE
T ss_pred CCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEE
Confidence 345678899999999998643 567899997532 000 11111110 112337999
Q ss_pred ccCCCCCCeEEEEEEEeCCcc--eEEEEEEEEeeCC
Q psy12421 117 IDCKPEDSGEYKCVATNKHGT--DETNCVVIVESEE 150 (168)
Q Consensus 117 ~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~v~~~p 150 (168)
.+++.+|+|.|.|.+.+..+. ....+.|.|...|
T Consensus 86 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 86 HNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKV 121 (124)
T ss_dssp CSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC--
T ss_pred ccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCC
Confidence 999999999999999988764 4667778887654
No 403
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.94 E-value=7e-09 Score=64.34 Aligned_cols=75 Identities=20% Similarity=0.339 Sum_probs=54.9
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EE----CC-CCCeEEEe--cCCEEEEEEccCCCCCCeEEE
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RE----LS-KRDYSMSY--SDGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~----~~-~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~ 128 (168)
+...+....+.+|++++|.|.+.+.+ .+.+.|+++. .. +. ..++.... .....+|.|.+++.+|+|.|.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 82 (113)
T 1sq2_N 3 VDQTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYR 82 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred eEeCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEE
Confidence 34456677889999999999998765 5789999863 21 11 13343322 234568999999999999999
Q ss_pred EEEEeC
Q psy12421 129 CVATNK 134 (168)
Q Consensus 129 C~a~n~ 134 (168)
|.+.+.
T Consensus 83 C~~~~~ 88 (113)
T 1sq2_N 83 CGLGVA 88 (113)
T ss_dssp EEECBT
T ss_pred EEEEeC
Confidence 999873
No 404
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.94 E-value=2.4e-09 Score=67.79 Aligned_cols=92 Identities=21% Similarity=0.272 Sum_probs=57.5
Q ss_pred cCCeEEecCCcEEEEEEEecc---CCCeeEEEeCC--E---EC-C-------------CCCeEEE--ecCCEEEEEEccC
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGK---PPPTVKWYKGN--R---EL-S-------------KRDYSMS--YSDGVVSMEIIDC 119 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~---p~p~i~W~~~~--~---~~-~-------------~~~~~~~--~~~~~~~l~i~~~ 119 (168)
+....+.+|++++|.|...+. ....+.||+.. . .+ . ..++... ...+...|.|.++
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 86 (126)
T 2h32_A 7 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISEL 86 (126)
T ss_dssp CSEEEEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCC
Confidence 345678899999999998764 35689999743 1 11 0 1233333 2345568999999
Q ss_pred CCCCCeEEEEEEEeCCcceEEEEEEEEeeCCCchhh
Q psy12421 120 KPEDSGEYKCVATNKHGTDETNCVVIVESEEESKEQ 155 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~ 155 (168)
+.+|+|.|.|.+.+..+.......|.|...+..+..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~t~l~v~~~~~~~~~ 122 (126)
T 2h32_A 87 QPEDEAMYYCAMGARSSEKEEREREWEEEMEPTAAR 122 (126)
T ss_dssp CGGGCEEEEEEEECSCCCCCCTTCC-----------
T ss_pred ChhHCEEEEEEEEcCCCCcceeEEEeeccCCCcccc
Confidence 999999999999988776655555666554444433
No 405
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.94 E-value=7e-10 Score=76.84 Aligned_cols=78 Identities=21% Similarity=0.224 Sum_probs=57.3
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccC-CC-eeEEEeCC--EEC-------------CCCCeEEEecCCEEEEEEccCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKP-PP-TVKWYKGN--REL-------------SKRDYSMSYSDGVVSMEIIDCK 120 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p-~i~W~~~~--~~~-------------~~~~~~~~~~~~~~~l~i~~~~ 120 (168)
+.+.. +....+.+|+++.|.|.+.+.+ .+ .+.|+++. ..+ ...++......+...|.|.+++
T Consensus 21 ~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 99 (234)
T 2j6e_L 21 SVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLR 99 (234)
T ss_dssp CCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCC
T ss_pred cEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCC
Confidence 33443 5667788999999999998854 34 69999863 211 0134444434555689999999
Q ss_pred CCCCeEEEEEEEeCCc
Q psy12421 121 PEDSGEYKCVATNKHG 136 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~~g 136 (168)
.+|+|.|.|.+.|..+
T Consensus 100 ~~D~G~Y~C~~~~~~~ 115 (234)
T 2j6e_L 100 SEDEADYYCATWDDSL 115 (234)
T ss_dssp STTCSEEEEEEEETTT
T ss_pred HHHCEEEEEEEEcCCc
Confidence 9999999999999987
No 406
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.94 E-value=2.2e-09 Score=74.44 Aligned_cols=87 Identities=15% Similarity=0.246 Sum_probs=55.6
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-eeEEEeCCEECCCCCeEEEecCC----EEEEEEccCCCCCCeEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-TVKWYKGNRELSKRDYSMSYSDG----VVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~W~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C 129 (168)
.+|.+........+..|+.+.|.|.+.|. |.| .+.|++++..+...........+ ...|.|......| |.|+|
T Consensus 129 ~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC 207 (228)
T 3bae_H 129 TAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITC 207 (228)
T ss_dssp BCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEE
T ss_pred CCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEE
Confidence 45666544434446789999999999986 777 99999987653211111011112 2358888887755 99999
Q ss_pred EEEeCCcceEEEEE
Q psy12421 130 VATNKHGTDETNCV 143 (168)
Q Consensus 130 ~a~n~~g~~~~~~~ 143 (168)
.|.|..|.......
T Consensus 208 ~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 208 NVAHPASSTKVDKK 221 (228)
T ss_dssp EEEEGGGTEEEEEE
T ss_pred EEEECCCCCCEEEE
Confidence 99999887655443
No 407
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.94 E-value=5.6e-09 Score=64.67 Aligned_cols=75 Identities=20% Similarity=0.270 Sum_probs=55.2
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC-----CCeeEEEeCC--E---EC----------CCCCeEEEecCCEEEEEEccC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP-----PPTVKWYKGN--R---EL----------SKRDYSMSYSDGVVSMEIIDC 119 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p-----~p~i~W~~~~--~---~~----------~~~~~~~~~~~~~~~l~i~~~ 119 (168)
+...+....+.+|++++|.|.+.+.+ .+.+.||+.. . .+ ...++......+...|.|.++
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v 83 (113)
T 1dlf_L 4 MTQTPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSC
T ss_pred EEEeCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCC
Confidence 34456667889999999999998765 4789999853 1 11 013344433445667999999
Q ss_pred CCCCCeEEEEEEEeC
Q psy12421 120 KPEDSGEYKCVATNK 134 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~ 134 (168)
+.+|+|.|.|.+.+.
T Consensus 84 ~~~DsG~Y~C~~~~~ 98 (113)
T 1dlf_L 84 EAEDLGVYFCSQSTH 98 (113)
T ss_dssp CGGGCEEEEEEECSS
T ss_pred ChHHCEEEEEEEecC
Confidence 999999999999875
No 408
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.94 E-value=2.1e-09 Score=72.76 Aligned_cols=83 Identities=18% Similarity=0.345 Sum_probs=60.5
Q ss_pred eEEecCCcEEEEEEEe----ccCCCeeEEEeCCEECC-------------CCCeEEEecCCEEEEEEccCCCCCCeEEEE
Q psy12421 67 RVMQVRQTCKLLCCLS----GKPPPTVKWYKGNRELS-------------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~----g~p~p~i~W~~~~~~~~-------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 129 (168)
..+.+|+++.|.|.+. +.|.+.+.|++++..+. ..+..+.. .+..+|.|.+++.+|+|.|.|
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~-~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDI-TNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEES-TTTTEEEECSCCGGGCEEEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEcc-CCCcEEEEecccchhCeEEEE
Confidence 5678899999999985 45788999999987652 11111111 222379999999999999999
Q ss_pred EEEeCCcce-----EEEEEEEEeeCC
Q psy12421 130 VATNKHGTD-----ETNCVVIVESEE 150 (168)
Q Consensus 130 ~a~n~~g~~-----~~~~~l~v~~~p 150 (168)
.+.|..|.. ...+.|.|..++
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~ 108 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADF 108 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCC
T ss_pred EEEcCCCCccccccccEEEEEEcCCC
Confidence 999987654 346667776653
No 409
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.94 E-value=4.3e-09 Score=72.43 Aligned_cols=86 Identities=19% Similarity=0.305 Sum_probs=59.2
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EE---C-----------------CCCCeEEEec--CCEEEEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RE---L-----------------SKRDYSMSYS--DGVVSMEI 116 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~---~-----------------~~~~~~~~~~--~~~~~l~i 116 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++. .. + ...++.+... .+..+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (222)
T 1q9r_B 6 ESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQM 85 (222)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred cCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEE
Confidence 34456788999999999998865 7899999853 11 0 0123333322 34568999
Q ss_pred ccCCCCCCeEEEEEEEeCCc-----ceEEEEEEEEee
Q psy12421 117 IDCKPEDSGEYKCVATNKHG-----TDETNCVVIVES 148 (168)
Q Consensus 117 ~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~ 148 (168)
.+++.+|+|.|.|.+.|..| .......|.|..
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 122 (222)
T 1q9r_B 86 NTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSA 122 (222)
T ss_dssp CSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECS
T ss_pred CcCCcccCeEEEEEEeccCCcccceEeCCceEEEecc
Confidence 99999999999999998764 112234566654
No 410
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.94 E-value=2.1e-09 Score=65.80 Aligned_cols=82 Identities=18% Similarity=0.268 Sum_probs=55.7
Q ss_pred CeEEecCCcEEEEEEEeccCC---CeeEEEeCCEEC----------C--------CCCeEEEe--cCCEEEEEEccCCCC
Q psy12421 66 PRVMQVRQTCKLLCCLSGKPP---PTVKWYKGNREL----------S--------KRDYSMSY--SDGVVSMEIIDCKPE 122 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g~p~---p~i~W~~~~~~~----------~--------~~~~~~~~--~~~~~~l~i~~~~~~ 122 (168)
...+.+|+++.|.|.+.+.+. ..+.|++..... . ..++.+.. ..+..+|.|.+++.+
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~ 82 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLD 82 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGG
T ss_pred CEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCCh
Confidence 356778999999999876543 348999865210 0 11111110 112347999999999
Q ss_pred CCeEEEEEEEeCCcceEEEEEEEEe
Q psy12421 123 DSGEYKCVATNKHGTDETNCVVIVE 147 (168)
Q Consensus 123 d~G~Y~C~a~n~~g~~~~~~~l~v~ 147 (168)
|+|.|.|.+.+..+.....+.|.|.
T Consensus 83 D~G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 83 DHGTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp GCEEEEEEECCSSTTCCEEEEEEEE
T ss_pred hCeEEEEEEEcCCcccceEEEEEEE
Confidence 9999999999987666666666654
No 411
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.48 E-value=9.1e-11 Score=72.58 Aligned_cols=73 Identities=19% Similarity=0.345 Sum_probs=53.0
Q ss_pred eecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE--EC-------------CCCCeEEEe--cCCEEEEEEccCCCCCC
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR--EL-------------SKRDYSMSY--SDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~--~~-------------~~~~~~~~~--~~~~~~l~i~~~~~~d~ 124 (168)
..+....+.+|++++|.|.+.+.+.+.+.|+++.. .+ ...++.+.. ..+..+|.|.+++.+|+
T Consensus 4 Q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 83 (110)
T 1u3h_A 4 QSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDS 83 (110)
Confidence 34556778899999999999888888999998642 11 112222221 22334799999999999
Q ss_pred eEEEEEEEeC
Q psy12421 125 GEYKCVATNK 134 (168)
Q Consensus 125 G~Y~C~a~n~ 134 (168)
|.|.|.+.|.
T Consensus 84 G~Y~C~~~~~ 93 (110)
T 1u3h_A 84 ATYFCAASAN 93 (110)
Confidence 9999999875
No 412
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.94 E-value=7.3e-10 Score=76.78 Aligned_cols=118 Identities=16% Similarity=0.147 Sum_probs=61.5
Q ss_pred CceeEEEEeCCCCCCCCCCcccceec---cCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCC-C-eeE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVRR---REPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPP-P-TVK 90 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p-~i~ 90 (168)
.+.+.+++..|.|. |.|....... .....+.+. ....+|.+...+.......|+.+.|.|.+.|.++ + .+.
T Consensus 94 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~l~V~--~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~ 169 (233)
T 3bqu_C 94 VFTIENMLSEDVAD--YYCLQSDNLPYTFGGGTNLEIK--RADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVK 169 (233)
T ss_dssp EEC-----CCCCSE--EEEEECSSSSCCBCCCCBC-----CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEE
T ss_pred EEEECCCCHHHCEE--EEEEEecCCceeecCCEEEEEe--CCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEE
Confidence 46678888888766 4333221110 011122221 2224677765444433447999999999998544 3 799
Q ss_pred EEeCCEECCCC-CeEE--E-ecCC----EEEEEEccCCCCCCeEEEEEEEeCCcc
Q psy12421 91 WYKGNRELSKR-DYSM--S-YSDG----VVSMEIIDCKPEDSGEYKCVATNKHGT 137 (168)
Q Consensus 91 W~~~~~~~~~~-~~~~--~-~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 137 (168)
|++++..+... .... . ..++ ...|.|......|.|.|+|.|.|....
T Consensus 170 W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 170 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp EEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred EEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 99999876543 1110 0 0111 235888888889999999999997543
No 413
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.94 E-value=2.6e-10 Score=76.31 Aligned_cols=70 Identities=23% Similarity=0.329 Sum_probs=52.2
Q ss_pred eEEecCCcEEEEEEEeccCCCeeEEEeCCEE--CC-------------CCCeEEEe---cCCEEEEEEccCCCCCCeEEE
Q psy12421 67 RVMQVRQTCKLLCCLSGKPPPTVKWYKGNRE--LS-------------KRDYSMSY---SDGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~--~~-------------~~~~~~~~---~~~~~~l~i~~~~~~d~G~Y~ 128 (168)
..+.+|+++.|.|.+.+.|.+.+.|++++.. +. ..+..... .++..+|.|.+++..|+|.|.
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 84 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 84 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence 4678999999999999999999999998752 21 01111111 223346999999999999999
Q ss_pred EEEEeCCc
Q psy12421 129 CVATNKHG 136 (168)
Q Consensus 129 C~a~n~~g 136 (168)
|.+.|..|
T Consensus 85 C~~~~~~~ 92 (184)
T 2ny1_B 85 CEVEDQKE 92 (184)
T ss_dssp EEETTEEE
T ss_pred EEEEcCCC
Confidence 99988755
No 414
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.93 E-value=8.4e-10 Score=77.88 Aligned_cols=78 Identities=26% Similarity=0.338 Sum_probs=55.8
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCCE--ECC-------------CCCeEEE--ecCCEEEEEEcc
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGNR--ELS-------------KRDYSMS--YSDGVVSMEIID 118 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~~--~~~-------------~~~~~~~--~~~~~~~l~i~~ 118 (168)
+|.+...+....+.+|+++.|.|.+.+. |.+.+.|+++.. .+. ..++.+. .......|.|.+
T Consensus 136 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 215 (259)
T 3omz_A 136 AQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISA 215 (259)
T ss_dssp -CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESS
T ss_pred CeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECC
Confidence 4667777778899999999999998874 889999998531 000 1122221 112233699999
Q ss_pred CCCCCCeEEEEEEEeC
Q psy12421 119 CKPEDSGEYKCVATNK 134 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~ 134 (168)
++.+|+|.|.|.+.+.
T Consensus 216 v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 216 LQLEDSAKYFCALGES 231 (259)
T ss_dssp CCGGGCSEEEEEEESC
T ss_pred CChhHCEEEEEEEeCc
Confidence 9999999999999853
No 415
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.93 E-value=5.6e-09 Score=65.95 Aligned_cols=83 Identities=20% Similarity=0.272 Sum_probs=56.6
Q ss_pred cCCeEEecCCcEEEEEEEeccCCC----eeEEEeCC----------------EECCC-----CCeEEEec----------
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKPPP----TVKWYKGN----------------RELSK-----RDYSMSYS---------- 108 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p~p----~i~W~~~~----------------~~~~~-----~~~~~~~~---------- 108 (168)
+....+.+|+++.|.|.+.+.+.+ .+.|++.. ..... .+..+...
T Consensus 9 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~ 88 (128)
T 3r0n_A 9 LPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEA 88 (128)
T ss_dssp CSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCC
T ss_pred CCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEecccccccccccc
Confidence 334667789999999999887665 88999962 22211 11111111
Q ss_pred -CCEEEEEEccCCCCCCeEEEEEEEe-CCcceEEEEEEEE
Q psy12421 109 -DGVVSMEIIDCKPEDSGEYKCVATN-KHGTDETNCVVIV 146 (168)
Q Consensus 109 -~~~~~l~i~~~~~~d~G~Y~C~a~n-~~g~~~~~~~l~v 146 (168)
....+|.|.+++.+|+|.|.|.+.+ ..|.......|.|
T Consensus 89 ~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V 128 (128)
T 3r0n_A 89 ELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 128 (128)
T ss_dssp BCSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCCCeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEEC
Confidence 1134799999999999999998765 5677777776654
No 416
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.93 E-value=2.7e-10 Score=79.00 Aligned_cols=81 Identities=16% Similarity=0.241 Sum_probs=47.7
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE--EC-----------C--CCCeEEEecCCEEEEEEccCCC
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR--EL-----------S--KRDYSMSYSDGVVSMEIIDCKP 121 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~--~~-----------~--~~~~~~~~~~~~~~l~i~~~~~ 121 (168)
.+.+...+....+.+|+++.|.|.+.+.|.+.+.|+++.. .+ . ..++......+..+|.|.+++.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 4566666778889999999999999998888999998531 11 0 1122221122334799999999
Q ss_pred CCCeEEEEEEEeCCcc
Q psy12421 122 EDSGEYKCVATNKHGT 137 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~ 137 (168)
+|+|.|.|.+.|..+.
T Consensus 103 ~D~G~Y~C~~~~~~~~ 118 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPY 118 (233)
T ss_dssp CCCSEEEEEECSSSSC
T ss_pred HHCEEEEEEEecCCce
Confidence 9999999999987653
No 417
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.93 E-value=4e-09 Score=73.07 Aligned_cols=74 Identities=26% Similarity=0.419 Sum_probs=54.4
Q ss_pred ecCCeEEecCCcEEEEEEEeccCC----CeeEEEeCC--EECC-----------------CCCeEEEe--cCCEEEEEEc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPP----PTVKWYKGN--RELS-----------------KRDYSMSY--SDGVVSMEII 117 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~----p~i~W~~~~--~~~~-----------------~~~~~~~~--~~~~~~l~i~ 117 (168)
.+....+.+|+++.|.|.+.+.|. +.+.|+++. ..+. ..++.+.. ..+..+|.|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (228)
T 3bae_H 6 ESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKIT 85 (228)
T ss_dssp EECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEEC
T ss_pred CCCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEc
Confidence 355678889999999999998774 899999852 2110 12333322 1234689999
Q ss_pred cCCCCCCeEEEEEEEeCCc
Q psy12421 118 DCKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 118 ~~~~~d~G~Y~C~a~n~~g 136 (168)
+++.+|+|.|.|.+.|..|
T Consensus 86 ~v~~~D~G~Y~C~~~~~~g 104 (228)
T 3bae_H 86 SVDTADTATYYCARRGFYG 104 (228)
T ss_dssp SCCGGGCEEEEEEEEEEST
T ss_pred CCCcccCEEEEEEEecCCC
Confidence 9999999999999999765
No 418
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.93 E-value=6.8e-10 Score=76.57 Aligned_cols=84 Identities=19% Similarity=0.309 Sum_probs=59.1
Q ss_pred cCCCeEEeecCCeE--EecCCcEEEEEEEecc---CC-CeeEEEeCCEECCCCCeEE--EecCC----EEEEEEccCCCC
Q psy12421 55 ESAPNFTFLLRPRV--MQVRQTCKLLCCLSGK---PP-PTVKWYKGNRELSKRDYSM--SYSDG----VVSMEIIDCKPE 122 (168)
Q Consensus 55 ~~~p~~~~~~~~~~--~~~g~~~~l~C~~~g~---p~-p~i~W~~~~~~~~~~~~~~--~~~~~----~~~l~i~~~~~~ 122 (168)
..+|.+...+.... +.+|+++.|.|.+.|. |. +.+.|++++..+....... ...++ ...|.|.++...
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 34566665555544 7889999999999987 33 7899999997764321110 11111 236899999999
Q ss_pred CCeEEEEEEEeCCcce
Q psy12421 123 DSGEYKCVATNKHGTD 138 (168)
Q Consensus 123 d~G~Y~C~a~n~~g~~ 138 (168)
|.|.|.|.+.|..+..
T Consensus 87 D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPS 102 (218)
T ss_dssp TTCCEEEEEEETTCSS
T ss_pred CCCeEEEEEECCcCCC
Confidence 9999999999987754
No 419
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.93 E-value=4.2e-09 Score=65.29 Aligned_cols=83 Identities=23% Similarity=0.312 Sum_probs=55.7
Q ss_pred CeEEecCCcEEEEEEEec-cCCCeeEEEeCCEE--------C----------CCCCeEEE--ecCCEEEEEEccCCCCCC
Q psy12421 66 PRVMQVRQTCKLLCCLSG-KPPPTVKWYKGNRE--------L----------SKRDYSMS--YSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g-~p~p~i~W~~~~~~--------~----------~~~~~~~~--~~~~~~~l~i~~~~~~d~ 124 (168)
...+.+|+++.|.|...+ .....+.|++.... + ...++.+. ...+..+|.|.+++.+|+
T Consensus 6 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 85 (116)
T 2or8_A 6 EVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDS 85 (116)
T ss_dssp EEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGC
T ss_pred eEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccC
Confidence 467889999999999865 34667999997521 0 01111110 112334699999999999
Q ss_pred eEEEEEEEeCCcce--EEEEEEEEee
Q psy12421 125 GEYKCVATNKHGTD--ETNCVVIVES 148 (168)
Q Consensus 125 G~Y~C~a~n~~g~~--~~~~~l~v~~ 148 (168)
|.|.|.+.+..+.. ...+.|.|..
T Consensus 86 G~Y~C~v~~~~~~~~~~~~~~l~V~p 111 (116)
T 2or8_A 86 GLYCCRVEIPGWFNDQKVTFSLQVKP 111 (116)
T ss_dssp EEEEEEECCSSTTCCEEEEEEEEEEC
T ss_pred EEEEEEEEcCCcccccEEEEEEEECC
Confidence 99999999875443 5555665543
No 420
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.92 E-value=1.7e-09 Score=78.95 Aligned_cols=83 Identities=16% Similarity=0.229 Sum_probs=63.4
Q ss_pred eEEecCCcEEEEEEEeccC-CCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEEE
Q psy12421 67 RVMQVRQTCKLLCCLSGKP-PPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVI 145 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g~p-~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 145 (168)
..+..|+++.|.|.+.+.+ .+.+.|++++..+..........++ .|.|.++...|+|.|+|. ..|.....+.|.
T Consensus 16 v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~---~~g~~~~~~~L~ 90 (325)
T 1n26_A 16 LTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGR--RLLLRSVQLHDSGNYSCY---RAGRPAGTVHLL 90 (325)
T ss_dssp EEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEEEEESS--EEEECSCCGGGCEEEEEE---SSSSCSCEEEEE
T ss_pred EECCCCCcEEEEeCCCCCCCCceEEEEECCccCCccccccccccc--eEEecccchhhCeEeEEE---eCCEEeeeEEEE
Confidence 4447899999999988755 7899999987655322222233344 799999999999999998 367777889999
Q ss_pred EeeCCCchh
Q psy12421 146 VESEEESKE 154 (168)
Q Consensus 146 v~~~p~~~~ 154 (168)
|..+|..+.
T Consensus 91 V~~pP~~P~ 99 (325)
T 1n26_A 91 VDVPPEEPQ 99 (325)
T ss_dssp ECCCCCCCC
T ss_pred eccCCCCCc
Confidence 988776654
No 421
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.92 E-value=7.1e-09 Score=63.76 Aligned_cols=75 Identities=17% Similarity=0.258 Sum_probs=52.5
Q ss_pred eEEecCCcEEEEEEEeccCCC-----eeEEEeCCEE-C----C------------CCCeEEEecCCEEEEEEccCCCCCC
Q psy12421 67 RVMQVRQTCKLLCCLSGKPPP-----TVKWYKGNRE-L----S------------KRDYSMSYSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g~p~p-----~i~W~~~~~~-~----~------------~~~~~~~~~~~~~~l~i~~~~~~d~ 124 (168)
..+.+|+++.|.|.+.+.|.+ .+.|++++.. + . ..+......+. +|.|.+++.+|+
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--sL~I~~v~~~D~ 81 (110)
T 1ncn_A 4 IQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSW--TLRLHNLQIKDK 81 (110)
T ss_dssp EEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTT--EEEECSCCGGGC
T ss_pred EEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCE--EEEEcCCChHHC
Confidence 467789999999998765544 4899997531 0 0 01122222223 799999999999
Q ss_pred eEEEEEEEeCCcceEEEEE
Q psy12421 125 GEYKCVATNKHGTDETNCV 143 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~ 143 (168)
|.|.|.+.+..+.......
T Consensus 82 G~Y~C~v~~~~~~~~~~~~ 100 (110)
T 1ncn_A 82 GLYQCIIHHKKPTGMIRIH 100 (110)
T ss_dssp EEEEEEEEEECSSSEEEEE
T ss_pred EEEEEEEEcCCCCceEEEE
Confidence 9999999998776554443
No 422
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.92 E-value=1.1e-08 Score=64.67 Aligned_cols=75 Identities=19% Similarity=0.393 Sum_probs=52.2
Q ss_pred EeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCCEE----CC-C-----CCeEEE-----ecCCEEEEEEccCCCCCC
Q psy12421 61 TFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGNRE----LS-K-----RDYSMS-----YSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 61 ~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~~~----~~-~-----~~~~~~-----~~~~~~~l~i~~~~~~d~ 124 (168)
...+....+.+|++++|.|.+.+. +.+.+.||++... +. . .++... .......|.|.+++.+|+
T Consensus 7 ~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds 86 (127)
T 2jju_A 7 IQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADA 86 (127)
T ss_dssp ECCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGC
T ss_pred EeeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHC
Confidence 334556788899999999999875 6778999997521 10 0 111110 011234699999999999
Q ss_pred eEEEEEEEeCC
Q psy12421 125 GEYKCVATNKH 135 (168)
Q Consensus 125 G~Y~C~a~n~~ 135 (168)
|.|.|.+.|..
T Consensus 87 G~Y~C~~~~~~ 97 (127)
T 2jju_A 87 GTYYCVKFRKG 97 (127)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEcCC
Confidence 99999999863
No 423
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.91 E-value=1.3e-08 Score=70.37 Aligned_cols=86 Identities=20% Similarity=0.293 Sum_probs=59.3
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--E---EC---------------CCCCeEEEe--cCCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--R---EL---------------SKRDYSMSY--SDGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~---~~---------------~~~~~~~~~--~~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++. . .+ ...++.+.. ..+..+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (223)
T 1dee_B 6 ESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNS 85 (223)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECC
Confidence 34567888999999999998865 5789999853 1 11 012333332 22456899999
Q ss_pred CCCCCCeEEEEEEEeCCc----c--eEEEEEEEEee
Q psy12421 119 CKPEDSGEYKCVATNKHG----T--DETNCVVIVES 148 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g----~--~~~~~~l~v~~ 148 (168)
++.+|+|.|.|.+.|..| . ......|.|..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~ 121 (223)
T 1dee_B 86 LRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSS 121 (223)
T ss_dssp CCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECS
T ss_pred CCHHHCEEEEEEEeccccCcccceeecCcEEEEEcc
Confidence 999999999999998753 1 11234677763
No 424
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.91 E-value=5.5e-09 Score=71.88 Aligned_cols=118 Identities=11% Similarity=0.173 Sum_probs=69.8
Q ss_pred ceeEEEEeCCCCCCCCCCccccee----ccCcceeeEeeecccCCCeEE-eecCCeEEecCCcEEEEEEEec-cCC--Ce
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVR----RREPLQITFWQETVESAPNFT-FLLRPRVMQVRQTCKLLCCLSG-KPP--PT 88 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~l~C~~~g-~p~--p~ 88 (168)
|.+.+++..|.+. |.|...... ......+.+.. ....+|.+. ..+... ..|+.+.|.|.+.+ .|. +.
T Consensus 83 L~I~~v~~~DsG~--Y~C~~~~~~~~~~~~~~~~l~V~~-~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~ 157 (221)
T 3m8o_H 83 LQMNSLKSDDTAM--YYCVIRGDVYNRQWGQGTLVTVSS-ASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLS 157 (221)
T ss_dssp EEECSCCGGGCEE--EEEEEESCTTCCCBBCCEEEEECS-CCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEE
T ss_pred EEECCCCHHHCEE--EEEEEECCChhheECCCEEEEEec-CCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEE
Confidence 6667778888666 433322111 11112222221 223456665 233333 78999999999998 665 38
Q ss_pred eEEEeCCEECCCCCeE-EE-ecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceE
Q psy12421 89 VKWYKGNRELSKRDYS-MS-YSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDE 139 (168)
Q Consensus 89 i~W~~~~~~~~~~~~~-~~-~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 139 (168)
+.|++++..+...... .. ..++ ...|.|......|.|.|+|.|.|..+...
T Consensus 158 v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 158 VTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp EEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 9999988655210000 00 1111 12588998999999999999999876543
No 425
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.91 E-value=7.4e-10 Score=81.33 Aligned_cols=121 Identities=15% Similarity=0.132 Sum_probs=71.9
Q ss_pred CceeEEEEeCCCCCCCCCCcccce--eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CC-CeeEE
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQV--RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PP-PTVKW 91 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W 91 (168)
.|.+.+++..|.|. |.|..... .......+.+.. ....+|.+........+..|+.+.|.|.+.|. |. +.+.|
T Consensus 80 ~L~I~~v~~~D~G~--Y~C~~~n~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W 156 (344)
T 1za6_B 80 YVELSSLRSEDTAV--YFCTRSLNMAYWGQGTLVTVSS-ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW 156 (344)
T ss_dssp EEEECSCCGGGCEE--EEEEETTTTCEECCCEEEEECS-SCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEE
T ss_pred EEEECCCCcccCEE--EEEEEecCcceecCcEEEEEec-CCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEE
Confidence 46677888888766 43332221 111122222221 11245666544433445689999999999986 54 79999
Q ss_pred EeCCEECCCCC-eEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEE
Q psy12421 92 YKGNRELSKRD-YSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDET 140 (168)
Q Consensus 92 ~~~~~~~~~~~-~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 140 (168)
++++..+.... ......++ ...|.|..+...| |.|+|.|.|..|....
T Consensus 157 ~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~ 209 (344)
T 1za6_B 157 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 209 (344)
T ss_dssp TTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEE
T ss_pred ecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 99987532100 00111111 1268888888777 9999999999886543
No 426
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.91 E-value=7.8e-10 Score=86.48 Aligned_cols=86 Identities=21% Similarity=0.353 Sum_probs=66.3
Q ss_pred eEEecCCcEEEEEEE-eccCCCeeEEEeCCEECCC------------CCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 67 RVMQVRQTCKLLCCL-SGKPPPTVKWYKGNRELSK------------RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~------------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
..+.+|++++|.|.+ .+.|.+.+.|++++..+.. ........++ +|.|.+++.+|+|.|+|.+.|
T Consensus 376 ~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 376 ITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG--SLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS--CEEESSCCGGGCEEEEEEEEC
T ss_pred cceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc--eEEEeccccccCeEEEEEEEc
Confidence 567899999999998 7899999999998652210 1111222334 699999999999999999999
Q ss_pred CCcce-EEEEEEEEeeCCCchh
Q psy12421 134 KHGTD-ETNCVVIVESEEESKE 154 (168)
Q Consensus 134 ~~g~~-~~~~~l~v~~~p~~~~ 154 (168)
..|.. .....|.|..+|..+.
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~ 475 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPE 475 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCE
T ss_pred CCCceeEEEEEEEEEcCCCCCE
Confidence 99887 7788898887665543
No 427
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.91 E-value=3.9e-09 Score=74.17 Aligned_cols=88 Identities=14% Similarity=0.197 Sum_probs=61.1
Q ss_pred EeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EE---C---------------CCCCeEEEe--cCCEEEEEE
Q psy12421 61 TFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RE---L---------------SKRDYSMSY--SDGVVSMEI 116 (168)
Q Consensus 61 ~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~---~---------------~~~~~~~~~--~~~~~~l~i 116 (168)
+..+.+..+.+|+++.|.|.+.+.+ .+.+.|++.. .. + ...++.+.. ..+..+|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 3456678889999999999998844 7899999831 10 0 012333332 233556999
Q ss_pred ccCCCCCCeEEEEEEEeCCcce-EEEEEEEEee
Q psy12421 117 IDCKPEDSGEYKCVATNKHGTD-ETNCVVIVES 148 (168)
Q Consensus 117 ~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 148 (168)
.+++.+|+|.|.|.+.|..+.. .....|.|..
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~ 117 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSA 117 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECS
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEec
Confidence 9999999999999999965553 2345566654
No 428
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.90 E-value=5.5e-09 Score=64.28 Aligned_cols=81 Identities=12% Similarity=0.151 Sum_probs=56.8
Q ss_pred CCeEEecCCcEEEEEEE-eccCCCeeEEEeCC-EECC------------C---CCeEEEecCCEEEEEEccCCCCCCeEE
Q psy12421 65 RPRVMQVRQTCKLLCCL-SGKPPPTVKWYKGN-RELS------------K---RDYSMSYSDGVVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 65 ~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~-~~~~------------~---~~~~~~~~~~~~~l~i~~~~~~d~G~Y 127 (168)
....+.+|++++|.|.. .+.+.+.+.|++.. ..+. . .++.+ ..+..+|.|.+++.+|+|.|
T Consensus 11 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~--~~~~~sL~I~~v~~~DsG~Y 88 (110)
T 2ptt_A 11 PDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYL--EENNGALHISNVRKEDKGTY 88 (110)
T ss_dssp CSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEE--CTTTCCEEESSCCGGGCEEE
T ss_pred CCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEE--eCCCccEEECCCCcccCeEE
Confidence 34678899999999998 67778899999842 1110 0 12222 11223799999999999999
Q ss_pred EEEEEeCCcceEEEEEEEEee
Q psy12421 128 KCVATNKHGTDETNCVVIVES 148 (168)
Q Consensus 128 ~C~a~n~~g~~~~~~~l~v~~ 148 (168)
.|.+.+.. .....+.|.|.+
T Consensus 89 ~C~v~~~~-~~~~~~~L~V~d 108 (110)
T 2ptt_A 89 YMRVLRET-ENELKITLEVFD 108 (110)
T ss_dssp EEEEESSS-BCCEEEEEEEEC
T ss_pred EEEEEcCC-CcEEEEEEEEEc
Confidence 99998765 344466777764
No 429
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.90 E-value=9.6e-09 Score=63.86 Aligned_cols=74 Identities=20% Similarity=0.307 Sum_probs=54.2
Q ss_pred EeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCC--E---ECC-------------CCCeEEEe--cCCEEEEEEccC
Q psy12421 61 TFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGN--R---ELS-------------KRDYSMSY--SDGVVSMEIIDC 119 (168)
Q Consensus 61 ~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~--~---~~~-------------~~~~~~~~--~~~~~~l~i~~~ 119 (168)
...+....+.+|++++|.|.+... +...+.|++.. . .+. ..++.+.. ..+..+|.|.++
T Consensus 4 ~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 83 (116)
T 1tvd_A 4 TQSSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPV 83 (116)
T ss_dssp ECCSCCEEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSC
T ss_pred ecCCCcEEEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccC
Confidence 345667788999999999998764 56789999853 1 110 23343332 345568999999
Q ss_pred CCCCCeEEEEEEEeC
Q psy12421 120 KPEDSGEYKCVATNK 134 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~ 134 (168)
+.+|+|.|.|.+.+.
T Consensus 84 ~~~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 84 RTEDSATYYCAFTLP 98 (116)
T ss_dssp CGGGCEEEEEEEECT
T ss_pred ChHHCEEEEEEEeCC
Confidence 999999999999874
No 430
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.90 E-value=9.2e-09 Score=72.38 Aligned_cols=86 Identities=21% Similarity=0.297 Sum_probs=58.8
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EE---C---------------CCCCeEEEe--cCCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RE---L---------------SKRDYSMSY--SDGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~---~---------------~~~~~~~~~--~~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|++.. .. + ...++.+.. ..+...|.|.+
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 87 (256)
T 3umt_A 8 QSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRS 87 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred ccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECC
Confidence 34456788999999999998866 7899999742 10 0 012333322 23455699999
Q ss_pred CCCCCCeEEEEEEEeC----CcceEEEEEEEEee
Q psy12421 119 CKPEDSGEYKCVATNK----HGTDETNCVVIVES 148 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~----~g~~~~~~~l~v~~ 148 (168)
++.+|+|.|.|.+.|. .+.......|.|..
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~ 121 (256)
T 3umt_A 88 LTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSS 121 (256)
T ss_dssp CCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC
T ss_pred CCcccCEEEEEEEccCCCccccEECCCEEEEEcC
Confidence 9999999999999987 22233345666664
No 431
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.90 E-value=8.9e-09 Score=73.49 Aligned_cols=78 Identities=19% Similarity=0.294 Sum_probs=59.6
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EEC------------------CCCCeEEEe-cCCEEEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--REL------------------SKRDYSMSY-SDGVVSME 115 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~------------------~~~~~~~~~-~~~~~~l~ 115 (168)
.+.+...+....+.+|+++.|.|.+.+.+.+.+.|+++. ..+ ...++.+.. ..+..+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 456677777889999999999999988888999999863 110 012333332 23456899
Q ss_pred EccCCCCCCeEEEEEEEeC
Q psy12421 116 IIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~ 134 (168)
|.+++.+|+|.|.|.+.|.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~ 122 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDL 122 (279)
T ss_dssp ESSCCGGGCEEEEEEEEET
T ss_pred EccCCccCCEEEEEEEccc
Confidence 9999999999999999994
No 432
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.90 E-value=7.4e-10 Score=80.60 Aligned_cols=83 Identities=19% Similarity=0.356 Sum_probs=57.3
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-eeEEEeCCEECCCCCeEE----EecCC----EEEEEEccCCCCCC
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-TVKWYKGNRELSKRDYSM----SYSDG----VVSMEIIDCKPEDS 124 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~W~~~~~~~~~~~~~~----~~~~~----~~~l~i~~~~~~d~ 124 (168)
..+|.+...+.......|+.+.|.|.+.|. |.+ .+.|++++..+....+.. ...++ ...|.|..+...|.
T Consensus 217 ~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~ 296 (323)
T 2wqr_A 217 RAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQK 296 (323)
T ss_dssp CBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHC
T ss_pred CCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCC
Confidence 457776554333222239999999999984 433 799999999886432211 11121 23588888888999
Q ss_pred eEEEEEEEeCCcc
Q psy12421 125 GEYKCVATNKHGT 137 (168)
Q Consensus 125 G~Y~C~a~n~~g~ 137 (168)
|.|+|.|.|..+.
T Consensus 297 g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 297 DEFICRAVHEAAS 309 (323)
T ss_dssp CCEEEEEECTTST
T ss_pred CEEEEEEEeCCCC
Confidence 9999999998765
No 433
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.89 E-value=6.9e-09 Score=73.61 Aligned_cols=72 Identities=25% Similarity=0.444 Sum_probs=52.3
Q ss_pred ecCCeEEecCCcEEEEEEEeccCC--CeeEEEeCC--EE---CC---------------CCCeEEEe--cCCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKPP--PTVKWYKGN--RE---LS---------------KRDYSMSY--SDGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~~~~--~~---~~---------------~~~~~~~~--~~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+. +.+.|+++. .. +. ..++.+.. ......|.|.+
T Consensus 144 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 223 (264)
T 2gjj_A 144 QSGPEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNS 223 (264)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCEEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECc
Confidence 344457889999999999998764 899999863 11 10 12222221 23455899999
Q ss_pred CCCCCCeEEEEEEEeC
Q psy12421 119 CKPEDSGEYKCVATNK 134 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~ 134 (168)
++.+|+|.|.|.+.|.
T Consensus 224 v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 224 LTSEDSADYYCVRSGN 239 (264)
T ss_dssp CCGGGCEEEEEEEECS
T ss_pred CCcccCEEEEEEEecC
Confidence 9999999999999995
No 434
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.89 E-value=8.4e-09 Score=70.87 Aligned_cols=86 Identities=23% Similarity=0.339 Sum_probs=60.2
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EE---C----C-------------CCCeEEEe--cCCEEEEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RE---L----S-------------KRDYSMSY--SDGVVSMEI 116 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~---~----~-------------~~~~~~~~--~~~~~~l~i 116 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|++++ .. + . ..++.+.. ..+..+|.|
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQM 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEE
Confidence 35567888999999999998866 7899999853 11 1 0 12333332 234558999
Q ss_pred ccCCCCCCeEEEEEEEeCCcce-E--EEEEEEEee
Q psy12421 117 IDCKPEDSGEYKCVATNKHGTD-E--TNCVVIVES 148 (168)
Q Consensus 117 ~~~~~~d~G~Y~C~a~n~~g~~-~--~~~~l~v~~ 148 (168)
.+++.+|+|.|.|.+.|..+.. . ....|.|..
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 120 (220)
T 1pz5_B 86 NNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSS 120 (220)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS
T ss_pred ccCCHHHCEEEEEEEecCCcccceECCCEEEEEcc
Confidence 9999999999999999976432 1 234566653
No 435
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.89 E-value=5.1e-08 Score=60.72 Aligned_cols=88 Identities=20% Similarity=0.308 Sum_probs=60.0
Q ss_pred EeecCCeEEecCCcEEEEEEEeccC-CCeeEEEeC--CE--E-C-----------CCCCeEEEe--cCCEEEEEEccCCC
Q psy12421 61 TFLLRPRVMQVRQTCKLLCCLSGKP-PPTVKWYKG--NR--E-L-----------SKRDYSMSY--SDGVVSMEIIDCKP 121 (168)
Q Consensus 61 ~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~~~--~~--~-~-----------~~~~~~~~~--~~~~~~l~i~~~~~ 121 (168)
...+....+.+|++++|.|...+.. ...+.||+. +. . + ...++.... ..+...|.|.+++.
T Consensus 3 ~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~ 82 (117)
T 3bp6_A 3 TFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRR 82 (117)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCG
T ss_pred eecCCcEEEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCH
Confidence 3456667889999999999997654 578999985 21 1 1 123444432 34556899999999
Q ss_pred CCCeEEEEEEEeCCcce----EEEEEEEEee
Q psy12421 122 EDSGEYKCVATNKHGTD----ETNCVVIVES 148 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~~----~~~~~l~v~~ 148 (168)
+|+|.|.|.+.+..+.. .....|.|.+
T Consensus 83 ~Dsg~Y~C~~~~~~~~~~~~~~~~t~L~V~~ 113 (117)
T 3bp6_A 83 NDSGIYLCGAISLHPKLKIEESPGAELVVTE 113 (117)
T ss_dssp GGCEEEEEEEEECSSSCEEEECCCEEEEEC-
T ss_pred HHCEEEEEEEEecCCccccccCCcEEEEEEh
Confidence 99999999998765432 2344566653
No 436
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.88 E-value=6.7e-09 Score=73.66 Aligned_cols=73 Identities=22% Similarity=0.336 Sum_probs=52.9
Q ss_pred eecCCeEEecCCcEEEEEEEeccCC--CeeEEEeCC--EEC--------------------CCCCeEEEec--CCEEEEE
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGKPP--PTVKWYKGN--REL--------------------SKRDYSMSYS--DGVVSME 115 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~~~~--~~~--------------------~~~~~~~~~~--~~~~~l~ 115 (168)
..+....+.+|++++|.|.+.+.+. +.+.|+++. ..+ ...++.+... .....|.
T Consensus 156 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 235 (268)
T 1x9q_A 156 DETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQ 235 (268)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred ECCCceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEE
Confidence 3455678999999999999998763 899999852 111 1123333221 2345799
Q ss_pred EccCCCCCCeEEEEEEEeC
Q psy12421 116 IIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~ 134 (168)
|.+++.+|+|.|.|.+.|.
T Consensus 236 I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 236 MNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp ECSCCGGGCEEEEEEEEET
T ss_pred ECCCCHHHCEEEEEEEccC
Confidence 9999999999999999874
No 437
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.88 E-value=7.4e-09 Score=71.10 Aligned_cols=86 Identities=27% Similarity=0.371 Sum_probs=58.9
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC-----------------CCCCeEEEe--cCCEEEEEEccC
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL-----------------SKRDYSMSY--SDGVVSMEIIDC 119 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~-----------------~~~~~~~~~--~~~~~~l~i~~~ 119 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++. ..+ ...++.+.. ..+..+|.|.++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (215)
T 1c5d_H 6 ESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSL 85 (215)
T ss_dssp EECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSC
T ss_pred cCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCC
Confidence 35567888999999999998864 5789999852 111 012333332 234568999999
Q ss_pred CCCCCeEEEEEEEeCCcc---eEEEEEEEEee
Q psy12421 120 KPEDSGEYKCVATNKHGT---DETNCVVIVES 148 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~~g~---~~~~~~l~v~~ 148 (168)
+.+|+|.|.|.+.|..+. ......|.|..
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~ 117 (215)
T 1c5d_H 86 QTEDTAIYFCTREDGWNYFDYWGPGTMVTVSS 117 (215)
T ss_dssp CGGGCEEEEEEECCSSSCSCCBCCCEEEEECS
T ss_pred CcccCEEEEEEEecCCcccceEcCCEEEEecC
Confidence 999999999999986432 11234666663
No 438
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.88 E-value=2.5e-10 Score=78.48 Aligned_cols=100 Identities=17% Similarity=0.256 Sum_probs=61.5
Q ss_pred eEEecCCcEEEEEEEeccCC-----CeeEEEeCCEEC--------------CCCCeEEEe---cCCEEEEEEccCCCCCC
Q psy12421 67 RVMQVRQTCKLLCCLSGKPP-----PTVKWYKGNREL--------------SKRDYSMSY---SDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 67 ~~~~~g~~~~l~C~~~g~p~-----p~i~W~~~~~~~--------------~~~~~~~~~---~~~~~~l~i~~~~~~d~ 124 (168)
..+.+|+.+.|.|.+.+.|. +.+.|++++... ...+..+.. ..+..+|.|.+++..|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~ 84 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE 84 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence 45678999999999888764 789999976322 011111111 11133699999999999
Q ss_pred eEEEEEEEeCCcceEEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 125 GEYKCVATNKHGTDETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 125 G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
|.|.|.+.|. +.....+.|.|...+..+.....+...+.+|+
T Consensus 85 G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~ 126 (222)
T 4i0k_A 85 GSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGN 126 (222)
T ss_dssp SCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC-----CCS
T ss_pred EEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCCCceecCCc
Confidence 9999999986 34445556666655444333333333455554
No 439
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.87 E-value=1.1e-08 Score=72.60 Aligned_cols=86 Identities=20% Similarity=0.259 Sum_probs=59.6
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC------C------------CCCeEEEec--CCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL------S------------KRDYSMSYS--DGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~------~------------~~~~~~~~~--~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++. ..+ . ..++.+... .+..+|.|.+
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 91 (261)
T 2xqy_G 12 QPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSS 91 (261)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcC
Confidence 35567788999999999999876 6889999863 111 0 123333321 3455899999
Q ss_pred CCCCCCeEEEEEEEeCCcce---EEEEEEEEee
Q psy12421 119 CKPEDSGEYKCVATNKHGTD---ETNCVVIVES 148 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~---~~~~~l~v~~ 148 (168)
++.+|+|.|.|.+.|..+.. .....|.|..
T Consensus 92 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 124 (261)
T 2xqy_G 92 LTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSS 124 (261)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECS
T ss_pred CCcccCeEEEEEEecCCCcceEECCCEEEEEcc
Confidence 99999999999999864311 1234666654
No 440
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.86 E-value=1.3e-08 Score=70.49 Aligned_cols=86 Identities=17% Similarity=0.256 Sum_probs=59.4
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EE---C---C------------CCCeEEEec--CCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RE---L---S------------KRDYSMSYS--DGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~---~---~------------~~~~~~~~~--~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++. .. + . ..++.+... .+..+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 34456788999999999999876 6899999853 11 1 0 123333321 3456899999
Q ss_pred CCCCCCeEEEEEEEeCCcce-EEEEEEEEee
Q psy12421 119 CKPEDSGEYKCVATNKHGTD-ETNCVVIVES 148 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 148 (168)
++.+|+|.|.|.+.|..+.. .....|.|..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~ 116 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVSA 116 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEECS
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEcC
Confidence 99999999999999864321 1234666654
No 441
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.86 E-value=6.1e-10 Score=76.42 Aligned_cols=125 Identities=17% Similarity=0.140 Sum_probs=65.5
Q ss_pred ceeEEEEeCCCCCCCCCCccccee------ccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEeccCCC--e
Q psy12421 17 NPRLRTRAIPKTIPAYVPEVQQVR------RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP--T 88 (168)
Q Consensus 17 ~~~~~~~~~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~ 88 (168)
|.+.+++..|.+. |.|...... ......+.+. .....+|.+........+..|+.+.|.|.+.|.+++ .
T Consensus 77 L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~~l~V~-~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~ 153 (215)
T 3nl4_H 77 LKITSPTTEDTAT--YFCVRKYGSEWGGDLWGPGTLVTVS-SGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVT 153 (215)
T ss_dssp EEESSCCGGGCEE--EEEEEECSSSSCEEEECCCEEEEEC-SSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCE
T ss_pred EEECCCCcccCEE--EEEEEecCCCccceEEcCCEEEEEe-CCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeE
Confidence 5566777788666 432222110 1111222221 122356776644444455679999999999986543 5
Q ss_pred eEEEeCCEECCCCC-eEEEecCCEEEE-EEccCCCCCCeEEEEEEEeCCcceEEEEEEE
Q psy12421 89 VKWYKGNRELSKRD-YSMSYSDGVVSM-EIIDCKPEDSGEYKCVATNKHGTDETNCVVI 145 (168)
Q Consensus 89 i~W~~~~~~~~~~~-~~~~~~~~~~~l-~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 145 (168)
+.|++++..+.... ......++...+ ....+...| |.|+|.|.|..|.......|.
T Consensus 154 v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 154 VTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp EEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred EEEeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 67999886443211 111222332111 114455667 999999999988876665554
No 442
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.86 E-value=1.9e-08 Score=62.92 Aligned_cols=85 Identities=16% Similarity=0.178 Sum_probs=57.9
Q ss_pred CeEEecCCcEEEEEEEeccC---CCeeEEEeCC--E---EC----------CCCCeEEEecCCEEEEEEccCCCCCCeEE
Q psy12421 66 PRVMQVRQTCKLLCCLSGKP---PPTVKWYKGN--R---EL----------SKRDYSMSYSDGVVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g~p---~p~i~W~~~~--~---~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 127 (168)
...+.+|+++.|.|...+.+ .+.+.||+.. . .+ ...++......+..+|.|.+++.+|+|.|
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~DsG~Y 88 (120)
T 1oaq_L 9 ALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIY 88 (120)
T ss_dssp EEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGCEEE
T ss_pred cEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChhhCeEE
Confidence 46788999999999998765 5789999842 1 11 02344444445566899999999999999
Q ss_pred EEEEEeCCcceE-EEEEEEEeeCC
Q psy12421 128 KCVATNKHGTDE-TNCVVIVESEE 150 (168)
Q Consensus 128 ~C~a~n~~g~~~-~~~~l~v~~~p 150 (168)
.|.+.+...... ....|.|...+
T Consensus 89 ~C~~~~~~~~~fg~gt~L~V~~~~ 112 (120)
T 1oaq_L 89 FCALWYSNHLVFGGGTKLTVLGQP 112 (120)
T ss_dssp EEEEEETTEEEECCCEEEEECC--
T ss_pred EEEEccCCCcEECCCEEEEEcCCC
Confidence 999987643111 12356665543
No 443
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.86 E-value=2.8e-09 Score=72.85 Aligned_cols=85 Identities=16% Similarity=0.302 Sum_probs=55.6
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEecc-CC-CeeEEEeCCEECCCCCe--EEEecCCE----EEEEEccCCCCCC
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PP-PTVKWYKGNRELSKRDY--SMSYSDGV----VSMEIIDCKPEDS 124 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~~~~~~~~~~~~--~~~~~~~~----~~l~i~~~~~~d~ 124 (168)
.+..+|.+...+.......|+.+.|.|.+.|. |. +.+.|+++|..+..... .....++. ..|.+......|.
T Consensus 105 ~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~ 184 (207)
T 2vol_A 105 GRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAG 184 (207)
T ss_dssp CCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSC
T ss_pred CCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCC
Confidence 34567887655544333358999999999985 44 38999999998754211 11223331 1355555555689
Q ss_pred eEEEEEEEeCCcc
Q psy12421 125 GEYKCVATNKHGT 137 (168)
Q Consensus 125 G~Y~C~a~n~~g~ 137 (168)
|.|+|.|.|....
T Consensus 185 g~ytC~a~n~~l~ 197 (207)
T 2vol_A 185 NTFTCSVLHEGLH 197 (207)
T ss_dssp CEEEEEEECTTSG
T ss_pred CEEEEEEECCCCC
Confidence 9999999998643
No 444
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.85 E-value=1.5e-08 Score=63.30 Aligned_cols=77 Identities=25% Similarity=0.427 Sum_probs=53.3
Q ss_pred eEEeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCCEE----CC--C----CCeEEE-----ecCCEEEEEEccCCCC
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGNRE----LS--K----RDYSMS-----YSDGVVSMEIIDCKPE 122 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~~~----~~--~----~~~~~~-----~~~~~~~l~i~~~~~~ 122 (168)
.+...+....+.+|++++|.|.+.+. +.+.+.||+++.. +. . .++... .......|.|.+++.+
T Consensus 9 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 88 (120)
T 2yz1_A 9 KVTQPEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPE 88 (120)
T ss_dssp CEECCSSEEEECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGG
T ss_pred EEECCCceEEEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHH
Confidence 34445566788899999999999875 6678999997521 10 0 011101 0122346999999999
Q ss_pred CCeEEEEEEEeCC
Q psy12421 123 DSGEYKCVATNKH 135 (168)
Q Consensus 123 d~G~Y~C~a~n~~ 135 (168)
|+|.|.|.+.+..
T Consensus 89 DsG~Y~C~~~~~~ 101 (120)
T 2yz1_A 89 DAGTYYCVKFQKG 101 (120)
T ss_dssp GCEEEEEEEEECC
T ss_pred HCEEEEEEEEcCC
Confidence 9999999998764
No 445
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.85 E-value=3e-09 Score=84.46 Aligned_cols=99 Identities=18% Similarity=0.217 Sum_probs=62.0
Q ss_pred CCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECCCC-CeEEEecCCEEEEEEccCCCCCCeEEEEEEEeCCcc-----e
Q psy12421 65 RPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT-----D 138 (168)
Q Consensus 65 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~-----~ 138 (168)
....+..|+.+.|.|.+.+ |.|.+.|++++..+... ...+...++ .|.|.+++..|+|.|.|.|.|..+. .
T Consensus 541 ~~v~v~~g~~~~L~C~~~s-p~a~v~W~~~~~~l~~~~~~~~~~~~~--~LlI~~v~~~DsG~Y~C~A~e~~~~~~~~~~ 617 (663)
T 1olz_A 541 RQHFFKHGGTAELKCSQKS-NLARVFWKFQNGVLKAESPKYGLMGRK--NLLIFNLSEGDSGVYQCLSEERVKNKTVFQV 617 (663)
T ss_dssp EEEEEETTSCEEECCCCSC-TTCEEEEEESSSBCCCCSSSBCCTTTT--CEEECSCCGGGCEEEEEEEEEECSSSEEEEE
T ss_pred eEEEEecCCcEEEEccCCC-CCCcEEEEECCeeccccCcceEEecCC--eEEEEecCcccCeEEEEEEEECccCCCceEE
Confidence 3467888999999999988 99999999999876432 112222234 6899999999999999999998422 3
Q ss_pred EEEEEEEEeeCCCchhhhhhhhhcccCCC
Q psy12421 139 ETNCVVIVESEEESKEQQELAHNFLYSGE 167 (168)
Q Consensus 139 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 167 (168)
.....|.|..+|.....+... ..+.+|+
T Consensus 618 ~~~~~l~V~v~P~~~~~p~~~-~~~~~g~ 645 (663)
T 1olz_A 618 VAKHVLEVKVVPKPVVAPTLS-VVQTEGS 645 (663)
T ss_dssp EEEEEEEEEC-------------------
T ss_pred EEEEEEEEEeCCccCCCCCCh-hhhhcCC
Confidence 456677887766544332222 3445554
No 446
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.84 E-value=1.2e-07 Score=60.49 Aligned_cols=91 Identities=20% Similarity=0.311 Sum_probs=62.5
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC-CCeeEEEeCC--E--E-C-----------CCCCeEEEe--cCCEEEEEEccCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP-PPTVKWYKGN--R--E-L-----------SKRDYSMSY--SDGVVSMEIIDCK 120 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~~~~--~--~-~-----------~~~~~~~~~--~~~~~~l~i~~~~ 120 (168)
+...+....+.+|++++|.|...... ...+.||+.. . . + ...++.... ......|.|.+++
T Consensus 12 v~Q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~ 91 (134)
T 3bik_B 12 LTFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTR 91 (134)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCC
T ss_pred EEECCCeEEEeCCCCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCC
Confidence 34456667899999999999987654 5789999852 1 1 1 123444432 3446689999999
Q ss_pred CCCCeEEEEEEEeCCcce----EEEEEEEEeeCC
Q psy12421 121 PEDSGEYKCVATNKHGTD----ETNCVVIVESEE 150 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~~g~~----~~~~~l~v~~~p 150 (168)
.+|+|.|.|.+.+..+.. .....|.|.+.+
T Consensus 92 ~~Dsg~Y~C~~~~~~~~~~~~~~~gt~L~V~~~~ 125 (134)
T 3bik_B 92 RNDSGIYLCGAISLHPKAKIEESPGAELVVTERI 125 (134)
T ss_dssp GGGCEEEEEEEEECSSSCEEEECCCEEEEEECCC
T ss_pred hHHCEEEEEEEEeCCCCceEEEcCCEEEEEeCCC
Confidence 999999999998764321 224567776544
No 447
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.84 E-value=9.3e-08 Score=60.24 Aligned_cols=91 Identities=13% Similarity=0.153 Sum_probs=60.7
Q ss_pred cCCeEEecCCcEEEEEEEeccC-CCeeEEEeCCE-----EC-C---------CCCeEEEe--cCCEEEEEEccCCCCCCe
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGKP-PPTVKWYKGNR-----EL-S---------KRDYSMSY--SDGVVSMEIIDCKPEDSG 125 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~~~~~-----~~-~---------~~~~~~~~--~~~~~~l~i~~~~~~d~G 125 (168)
+....+.+|++++|.|...+.. ...+.|++... .+ . ..++.+.. ..+..+|.|.+++.+|+|
T Consensus 9 p~~v~~~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg 88 (124)
T 2nms_A 9 PTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDAD 88 (124)
T ss_dssp CSEEEEETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred ccEEEEeCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHCE
Confidence 4456788999999999987643 33689998642 11 0 12233321 245668999999999999
Q ss_pred EEEEEEEeCCcceEEEEEEEEeeCCCchh
Q psy12421 126 EYKCVATNKHGTDETNCVVIVESEEESKE 154 (168)
Q Consensus 126 ~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~ 154 (168)
.|.|.+..........+.|.|...|..+.
T Consensus 89 ~Y~C~~~~~~~~~~~~v~L~V~~~~~~~~ 117 (124)
T 2nms_A 89 TYWCGIEKTGNDLGVTVQVTIDPAPVTQE 117 (124)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCC----
T ss_pred EEEEEEEcCCCCccEEEEEEEeCCCcCCC
Confidence 99999987754455567788877655543
No 448
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=98.83 E-value=3.5e-08 Score=62.61 Aligned_cols=79 Identities=16% Similarity=0.342 Sum_probs=58.0
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC--CEE------C----C-------------CCCeEE-EecC
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG--NRE------L----S-------------KRDYSM-SYSD 109 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~--~~~------~----~-------------~~~~~~-~~~~ 109 (168)
.++.+...+....+.+|++++|.|...+.....+.||+. +.. + . ..++.. ....
T Consensus 3 ~~~~v~Q~p~~~~v~~G~~vtL~C~~s~~~~~~v~WyrQ~~g~~l~~p~~l~~~~~~~~~~~~~~~~~~~~rfs~~~~~~ 82 (128)
T 1nez_G 3 QAPELRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTN 82 (128)
T ss_dssp -CCEEEEESSCEEECTTCCEEEEEEEESCCSSCEEEEEEESSCSSCCCEEEEEECSSSCCEEECTTTTGGGTEEEEEETT
T ss_pred cCCeeEECCCeEEEcCCCCEEEEEEeCccCCCcEEEEEeCCCCCCCCcEEEEEEecccCCceeeccccCCCcEEEEeCCC
Confidence 356777788889999999999999998766678999973 211 1 0 123333 3344
Q ss_pred CEEEEEEccCCCCCCeEEEEEEEeC
Q psy12421 110 GVVSMEIIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 110 ~~~~l~i~~~~~~d~G~Y~C~a~n~ 134 (168)
....|.|.+++.+|+|.|.|.+...
T Consensus 83 ~~~~L~I~~~~~~Dsg~YyCa~~~~ 107 (128)
T 1nez_G 83 NKYVLTLNKFSKENEGYYFCSVISN 107 (128)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CEEEEEECCCCHHHCEEEEEEEcCC
Confidence 5567999999999999999988753
No 449
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.83 E-value=5.5e-10 Score=78.07 Aligned_cols=122 Identities=10% Similarity=0.163 Sum_probs=71.8
Q ss_pred CceeEEEEeCCCCCCCCCCcccce------eccCcceeeEeee-cccCCCeEEe-ecCCeEEecCCcEEEEEEEeccCCC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQV------RRREPLQITFWQE-TVESAPNFTF-LLRPRVMQVRQTCKLLCCLSGKPPP 87 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p 87 (168)
.|.+.+++..|.+. |.|..... .......+.+... ....+|.+.. .+....+..|+.+.|.|.+.|.|++
T Consensus 78 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~ 155 (246)
T 4dzb_B 78 TLTVTSAHPEDSSF--YICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD 155 (246)
T ss_dssp EEEECSCCGGGCEE--EEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSS
T ss_pred EEEECCCCHHHCEE--EEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCC
Confidence 36677778888666 43332211 1111222222210 1224566543 3333445569999999999997765
Q ss_pred --eeEEEeCCEECCCCCeEEEe--------cCCE----EEEEEccCCCCC-CeEEEEEEEeCCcceE
Q psy12421 88 --TVKWYKGNRELSKRDYSMSY--------SDGV----VSMEIIDCKPED-SGEYKCVATNKHGTDE 139 (168)
Q Consensus 88 --~i~W~~~~~~~~~~~~~~~~--------~~~~----~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~ 139 (168)
.+.|++++..+......... .++. ..|.|......| .|.|+|.|.|......
T Consensus 156 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 156 HVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp CEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred ceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 89999999887542211000 1221 237788777777 9999999999865543
No 450
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.83 E-value=1.2e-08 Score=73.02 Aligned_cols=74 Identities=16% Similarity=0.300 Sum_probs=53.9
Q ss_pred EEeecCCeEEecCCcEEEEEEEecc--CCCeeEEEeCCE--ECC------------------CCCeEEE--ecCCEEEEE
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKGNR--ELS------------------KRDYSMS--YSDGVVSME 115 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~~--~~~------------------~~~~~~~--~~~~~~~l~ 115 (168)
+.. +....+.+|++++|.|.+.+. +.+.+.|++... .+. ..++.+. ...+..+|.
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (280)
T 3fku_X 4 LVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMD 82 (280)
T ss_dssp EEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEE
T ss_pred EEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEE
Confidence 444 667888999999999999875 568899997421 100 1233333 233456799
Q ss_pred EccCCCCCCeEEEEEEEeC
Q psy12421 116 IIDCKPEDSGEYKCVATNK 134 (168)
Q Consensus 116 i~~~~~~d~G~Y~C~a~n~ 134 (168)
|.+++.+|+|.|.|.+.|.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 83 LRSLRSEDTAVYYCARSPS 101 (280)
T ss_dssp ECSCCSTTCEECCEEECSS
T ss_pred ECCCChhhCEEEEEEEecC
Confidence 9999999999999999986
No 451
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.82 E-value=3.2e-09 Score=66.70 Aligned_cols=86 Identities=14% Similarity=0.129 Sum_probs=59.3
Q ss_pred CeEEecCCcEEEEEEE-eccCCCeeEEEeCCE-EC----------C----CCCeEEEecCCEEEEEEccCCCCCCeEEEE
Q psy12421 66 PRVMQVRQTCKLLCCL-SGKPPPTVKWYKGNR-EL----------S----KRDYSMSYSDGVVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~-~~----------~----~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 129 (168)
...+.+|++++|.|.. .......+.|+++.. .+ . ..+..+...++ +|.|.+++.+|+|.|.|
T Consensus 13 pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~--sL~I~nv~~~DsG~Y~c 90 (121)
T 2edo_A 13 HMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSG--ALYISKVQKEDNSTYIM 90 (121)
T ss_dssp CCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTC--CEEESSCCGGGCSEEEE
T ss_pred EEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCc--eEEEeCCCHHHCeEEEE
Confidence 3577899999999986 334456799998652 11 0 01222221333 79999999999999999
Q ss_pred EEEeCCc-ceEEEEEEEEeeCCCch
Q psy12421 130 VATNKHG-TDETNCVVIVESEEESK 153 (168)
Q Consensus 130 ~a~n~~g-~~~~~~~l~v~~~p~~~ 153 (168)
.+.+..+ .....+.|.|..++..|
T Consensus 91 ~v~~~~~~~~~~~~~L~V~~~~~~P 115 (121)
T 2edo_A 91 RVLKKTGNEQEWKIKLQVLDPVPKP 115 (121)
T ss_dssp EEEETTTEEEECCEECEEECCSCCC
T ss_pred EEEcCCCcEEEEEEEEEEECCCCCC
Confidence 9998754 34567788887765544
No 452
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.82 E-value=2.1e-09 Score=81.43 Aligned_cols=124 Identities=13% Similarity=0.142 Sum_probs=73.5
Q ss_pred CceeEEEEeCCCCCCCCCCccccee-----ccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-e
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVR-----RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-T 88 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~ 88 (168)
.|.+.+++..|.+. |.|...... ......+.+.. ....+|.+........+..|+.+.|.|.+.|. |.| .
T Consensus 80 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~ 156 (444)
T 1igt_B 80 YLQMSRLKSEDTAM--YYCARHGGYYAMDYWGQGTTVTVSS-AKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVT 156 (444)
T ss_dssp EEEECSCCGGGCEE--EEEEEECSSSCEEEEBCCEEEEECS-CCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCE
T ss_pred EEEECCCCHHHCEE--EEEEEecCCcccccccCcEEEEecC-CCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcE
Confidence 46677788888666 433322110 01112222211 12235655543333334789999999999985 776 9
Q ss_pred eEEEeCCEECCCCC-eEEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 89 VKWYKGNRELSKRD-YSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 89 i~W~~~~~~~~~~~-~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
+.|++++..+.... .... ..+ ...|.|.++...| |.|+|.|.|..|.......+
T Consensus 157 v~W~~~~~~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i 215 (444)
T 1igt_B 157 LTWNSGSLSSGVHTFPAVL-QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKI 215 (444)
T ss_dssp EEEGGGTBCTTEEECCCEE-ETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEEC
T ss_pred EEEecCCCCCCeEecCccc-cCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEe
Confidence 99999886532100 0000 011 1258899999889 99999999999886554444
No 453
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.82 E-value=1.1e-08 Score=68.66 Aligned_cols=83 Identities=13% Similarity=0.197 Sum_probs=58.9
Q ss_pred CeEEecCCcEEEEEEEec-cCCCeeEEEeC-CEEC------------CC---CCeEEEecCCEEEEEEccCCCCCCeEEE
Q psy12421 66 PRVMQVRQTCKLLCCLSG-KPPPTVKWYKG-NREL------------SK---RDYSMSYSDGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g-~p~p~i~W~~~-~~~~------------~~---~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 128 (168)
...+.+|+++.|.|.+.+ .+.+.+.|++. +..+ .. .+..+...++ +|.|.+++..|+|.|.
T Consensus 8 ~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~--sL~I~~v~~~D~G~Y~ 85 (180)
T 2dru_A 8 NVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNG--ALRIYNVSKEDRGDYY 85 (180)
T ss_dssp EEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTC--CEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCc--cEEEcCCCHHHCeEEE
Confidence 457889999999998754 34789999994 2211 01 2222212333 7999999999999999
Q ss_pred EEEEeCCcceEEEEEEEEeeCCC
Q psy12421 129 CVATNKHGTDETNCVVIVESEEE 151 (168)
Q Consensus 129 C~a~n~~g~~~~~~~l~v~~~p~ 151 (168)
|.+.+.. .....+.|.|..++.
T Consensus 86 C~v~~~~-~~~~~~~L~V~~~~~ 107 (180)
T 2dru_A 86 MRMLHET-EDQWKITMEVYEMVS 107 (180)
T ss_dssp EEEESSS-EEEEEEEEEEECCCC
T ss_pred EEEEcCC-eEEEEEEEEEECCCC
Confidence 9998776 556677888876543
No 454
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.81 E-value=2.4e-08 Score=69.47 Aligned_cols=74 Identities=20% Similarity=0.248 Sum_probs=53.6
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--------------EEC----CCCCeEEEe-cCCEEEEEEccC
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--------------REL----SKRDYSMSY-SDGVVSMEIIDC 119 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--------------~~~----~~~~~~~~~-~~~~~~l~i~~~ 119 (168)
.+...+....+.+|+++.|.|.+.+ +.+.+.|++.. ... ...++.+.. ..+..+|.|.++
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 3445566778999999999999876 88899999821 111 012333332 234557999999
Q ss_pred CCCCCeEEEEEEEe
Q psy12421 120 KPEDSGEYKCVATN 133 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n 133 (168)
+.+|+|.|.|.+.+
T Consensus 83 ~~~D~G~Y~C~~~~ 96 (240)
T 3q5y_A 83 ELEDSAMYFCASSL 96 (240)
T ss_dssp CGGGCEEEEEEEES
T ss_pred ChhHCEEEEEEEcc
Confidence 99999999999983
No 455
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.81 E-value=2.2e-08 Score=70.89 Aligned_cols=74 Identities=15% Similarity=0.312 Sum_probs=54.5
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EE---C---------------CCCCeEEEec--CCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RE---L---------------SKRDYSMSYS--DGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~---~---------------~~~~~~~~~~--~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++. .. + ...++.+... .+..+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (257)
T 3bn9_D 6 QSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSS 85 (257)
T ss_dssp EECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEES
T ss_pred ccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECC
Confidence 34567788999999999998865 6889999853 11 0 0123333322 3456899999
Q ss_pred CCCCCCeEEEEEEEeCCc
Q psy12421 119 CKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g 136 (168)
++.+|+|.|.|.+.|..|
T Consensus 86 v~~~DsG~Y~C~~~~~~g 103 (257)
T 3bn9_D 86 LRAEDTAVYYCARPYLTY 103 (257)
T ss_dssp CCGGGCEEEEEEEECCSS
T ss_pred CChhhCEEEEEEEecCCC
Confidence 999999999999999765
No 456
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.81 E-value=2.6e-08 Score=70.48 Aligned_cols=90 Identities=13% Similarity=0.185 Sum_probs=60.5
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeC--CEEC------------C-----CCCeEEEe-cCCEEEEEEc
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKG--NREL------------S-----KRDYSMSY-SDGVVSMEII 117 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~--~~~~------------~-----~~~~~~~~-~~~~~~l~i~ 117 (168)
+.+...+....+.+|+++.|.|.+. .+.+.+.|++. +..+ . ..++.+.. ..+..+|.|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 4455556667899999999999976 57889999982 2111 0 03333332 1234579999
Q ss_pred cCCCCCCeEEEEEEEeC--CcceEEEEEEEEee
Q psy12421 118 DCKPEDSGEYKCVATNK--HGTDETNCVVIVES 148 (168)
Q Consensus 118 ~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~ 148 (168)
+++.+|+|.|.|.+.|. .+.......|.|..
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~ 138 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLE 138 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEec
Confidence 99999999999999984 22233344556654
No 457
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.81 E-value=3.9e-08 Score=75.19 Aligned_cols=84 Identities=17% Similarity=0.362 Sum_probs=58.2
Q ss_pred ccCCCeEEeecCC-eEEecCCcEEEEEEEeccCC--CeeEEEeCCEECCCCCeE----EEe---cCC----EEEEEEccC
Q psy12421 54 VESAPNFTFLLRP-RVMQVRQTCKLLCCLSGKPP--PTVKWYKGNRELSKRDYS----MSY---SDG----VVSMEIIDC 119 (168)
Q Consensus 54 ~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~----~~~---~~~----~~~l~i~~~ 119 (168)
+..+|.+...+.. ..+..|+.+.|.|.+.|.++ +.+.|+++|..+....+. ... .++ ...|.|...
T Consensus 346 ~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~ 425 (475)
T 1iga_A 346 NTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAE 425 (475)
T ss_pred CCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChH
Confidence 3567877655443 34678999999999998643 599999999988654211 111 122 124677777
Q ss_pred CCCCCeEEEEEEEeCCcc
Q psy12421 120 KPEDSGEYKCVATNKHGT 137 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~~g~ 137 (168)
...|.|.|+|.|.|....
T Consensus 426 ~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 426 DWKKGDTFSCMVGHEALP 443 (475)
T ss_pred HhcCCCEEEEEEEcCCCC
Confidence 778899999999998644
No 458
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.81 E-value=1.5e-08 Score=62.83 Aligned_cols=86 Identities=23% Similarity=0.316 Sum_probs=56.9
Q ss_pred cCCeEEecCCcEEEEEEEecc--CCCeeEEEeCC-------EEC---C--------CCCeEEE--ecCCEEEEEEccCCC
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKGN-------REL---S--------KRDYSMS--YSDGVVSMEIIDCKP 121 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~-------~~~---~--------~~~~~~~--~~~~~~~l~i~~~~~ 121 (168)
+....+.+|++++|.|..... ....+.|++.. ..+ . ..++.+. ...+..+|.|.+++.
T Consensus 4 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 83 (115)
T 2or7_A 4 HTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVV 83 (115)
T ss_dssp --CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCG
T ss_pred ccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCH
Confidence 445678899999999998653 35679999974 111 0 1122211 112334799999999
Q ss_pred CCCeEEEEEEEeCCcceEEEEEEEEeeC
Q psy12421 122 EDSGEYKCVATNKHGTDETNCVVIVESE 149 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 149 (168)
+|+|.|.|.+.+........+.|.|...
T Consensus 84 ~DsG~Y~C~v~~~~~~~~~~v~L~V~~~ 111 (115)
T 2or7_A 84 GDGGPYCCVVEIPGAFHFVDYMLEVKPE 111 (115)
T ss_dssp GGCEEEEEEECCTTSCEEEEEEEEEESC
T ss_pred HHCEEEEEEEECCCceeEEEEEEEEcCC
Confidence 9999999999876544566666766543
No 459
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.80 E-value=3.7e-09 Score=73.12 Aligned_cols=82 Identities=20% Similarity=0.258 Sum_probs=53.8
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEecc-CCC-eeEEEeCCEECCCC-CeEEEecCC----EEEEEEccCCCCCCeEEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-TVKWYKGNRELSKR-DYSMSYSDG----VVSMEIIDCKPEDSGEYKC 129 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~W~~~~~~~~~~-~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C 129 (168)
+|.+........+..|+.+.|.|.+.|. |.| .+.|++++..+... .......++ ...|.|......| |.|+|
T Consensus 128 ~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C 206 (225)
T 1op3_H 128 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 206 (225)
T ss_dssp CCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCE
T ss_pred CCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEE
Confidence 4655433222234679999999999986 776 99999988653210 001111222 2258888888888 99999
Q ss_pred EEEeCCcceE
Q psy12421 130 VATNKHGTDE 139 (168)
Q Consensus 130 ~a~n~~g~~~ 139 (168)
.|.|..+...
T Consensus 207 ~a~n~~~~~~ 216 (225)
T 1op3_H 207 NVNHKPSNTK 216 (225)
T ss_dssp EEEEGGGTEE
T ss_pred EEEcCCCCcc
Confidence 9999766544
No 460
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.80 E-value=2.7e-08 Score=75.67 Aligned_cols=74 Identities=15% Similarity=0.279 Sum_probs=54.9
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeC--CEE---C---------------CCCCeEEEec--CCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKG--NRE---L---------------SKRDYSMSYS--DGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~--~~~---~---------------~~~~~~~~~~--~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++ +.. + ...++.+... .+...|.|.+
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRS 85 (457)
T ss_dssp ECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred cCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECC
Confidence 44557788999999999998876 788999984 211 1 0123333322 3456899999
Q ss_pred CCCCCCeEEEEEEEeCCc
Q psy12421 119 CKPEDSGEYKCVATNKHG 136 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g 136 (168)
++.+|+|.|.|.+.|..|
T Consensus 86 v~~~D~G~Y~C~~~~~~~ 103 (457)
T 1hzh_H 86 LRSADTAVYYCARVGPYS 103 (457)
T ss_dssp CCGGGCEEEEEEECCCCC
T ss_pred CCcccCEEEEEEEecCCc
Confidence 999999999999999865
No 461
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=98.80 E-value=3e-08 Score=60.75 Aligned_cols=91 Identities=13% Similarity=0.175 Sum_probs=59.6
Q ss_pred CCCeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCEECC---CCCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELS---KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 56 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
.+|.+...+.. .+..|+.++|.|.... ....+.|+|++.... ..............|.|..++..|+|.|.|...
T Consensus 8 pkPsL~a~P~~-vv~~G~~VtL~C~~~~-~~~~f~l~k~g~~~~~~~~~~~~~~~~~~~~~f~i~~vt~~~aG~Y~C~~~ 85 (106)
T 3kgr_A 8 PRPSISAEPGT-VIPLGSHVTFVCRGPV-GVQTFRLERESRSTYNDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYY 85 (106)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEEECT-TCCEEEEEEGGGTEEEEECCCEEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEEeCCC-ccCCCCeEEEEEEccC-CCcEEEEEECCCccccccccccccCCCCcceEEEecCCCcCCCceEEEEee
Confidence 45777666654 7889999999999754 345789999885431 111111111123469999999999999999988
Q ss_pred eCCcce--EEEEEEEEee
Q psy12421 133 NKHGTD--ETNCVVIVES 148 (168)
Q Consensus 133 n~~g~~--~~~~~l~v~~ 148 (168)
+..+.. +..+.|.|.+
T Consensus 86 ~~~~~S~~Sdpl~L~Vtg 103 (106)
T 3kgr_A 86 KPPKWSEQSDYLELLVKE 103 (106)
T ss_dssp ETTEECCCCCCEEEEEEC
T ss_pred CCCcccCCCCCEEEEEeC
Confidence 864332 3344555543
No 462
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.79 E-value=8.4e-08 Score=59.48 Aligned_cols=72 Identities=24% Similarity=0.412 Sum_probs=53.3
Q ss_pred cCCeEEecCCcEEEEEEEecc-CCCeeEEEeCC--E---EC----C----------CCCeEEEecCCEEEEEEccCCCCC
Q psy12421 64 LRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGN--R---EL----S----------KRDYSMSYSDGVVSMEIIDCKPED 123 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~--~---~~----~----------~~~~~~~~~~~~~~l~i~~~~~~d 123 (168)
+....+.+|++++|.|...+. +...+.|++.. . .+ . ..++......+..+|.|.+++.+|
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~D 87 (115)
T 2otu_A 8 SSSASFSLGASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPED 87 (115)
T ss_dssp CCCEECCTTCCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCCEEECCCCCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccCCEEEEEECCCChhH
Confidence 566788899999999998875 67789999842 1 11 0 123443334455689999999999
Q ss_pred CeEEEEEEEeCC
Q psy12421 124 SGEYKCVATNKH 135 (168)
Q Consensus 124 ~G~Y~C~a~n~~ 135 (168)
+|.|.|.+.+..
T Consensus 88 sg~Y~C~~~~~~ 99 (115)
T 2otu_A 88 EAIYICGVGDTI 99 (115)
T ss_dssp CEEEEEEEEECC
T ss_pred CEEEEEEEecCC
Confidence 999999998754
No 463
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.79 E-value=1.4e-09 Score=74.81 Aligned_cols=88 Identities=16% Similarity=0.239 Sum_probs=61.7
Q ss_pred CeEEecCCcEEEEEEEec-cCCCe----eEEEeCCEECC--------------CCCeEEEe-----cCCEEEEEEccCCC
Q psy12421 66 PRVMQVRQTCKLLCCLSG-KPPPT----VKWYKGNRELS--------------KRDYSMSY-----SDGVVSMEIIDCKP 121 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g-~p~p~----i~W~~~~~~~~--------------~~~~~~~~-----~~~~~~l~i~~~~~ 121 (168)
...+.+|+++.|.|.+.+ .+.+. +.|++++.... ..+..+.. ..+..+|.|.+++.
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 87 (221)
T 3eow_R 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRV 87 (221)
T ss_dssp CCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSC
T ss_pred cEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCCh
Confidence 455678999999999854 45444 99999864221 12222222 11233799999999
Q ss_pred CCCeEEEEEEEeCC-cceEEEEEEEEeeCCCch
Q psy12421 122 EDSGEYKCVATNKH-GTDETNCVVIVESEEESK 153 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~-g~~~~~~~l~v~~~p~~~ 153 (168)
+|+|.|.|.+.|.. |.......|.|..+|...
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~ 120 (221)
T 3eow_R 88 EDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNT 120 (221)
T ss_dssp CCCSCBEEEEEESSSCSCEEECCCCCCCCCEEE
T ss_pred HHCeEEEEEEEeCCCCceEEEEEEEEEECCCce
Confidence 99999999999976 777777778877765543
No 464
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.79 E-value=4.9e-08 Score=74.65 Aligned_cols=87 Identities=20% Similarity=0.279 Sum_probs=60.2
Q ss_pred eecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC------------------CCCCeEEEec--CCEEEEEEc
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL------------------SKRDYSMSYS--DGVVSMEII 117 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~------------------~~~~~~~~~~--~~~~~l~i~ 117 (168)
..+....+.+|+++.|.|.+.+.+ .+.+.||++. ..+ ...++.+... .+..+|.|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (475)
T 1iga_A 6 EQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLS 85 (475)
T ss_pred ccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEEC
Confidence 355667888999999999998764 6789999853 111 0122333221 234579999
Q ss_pred cCCCCCCeEEEEEEEeCCcc------eEEEEEEEEee
Q psy12421 118 DCKPEDSGEYKCVATNKHGT------DETNCVVIVES 148 (168)
Q Consensus 118 ~~~~~d~G~Y~C~a~n~~g~------~~~~~~l~v~~ 148 (168)
+++.+|+|.|.|.+.|..|. ......|.|..
T Consensus 86 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~ 122 (475)
T 1iga_A 86 SLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSS 122 (475)
T ss_pred CCChhhCEEEEEEEeccCCCccceeeecCceEEEecc
Confidence 99999999999999998762 12344666653
No 465
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.79 E-value=5.6e-08 Score=67.67 Aligned_cols=74 Identities=19% Similarity=0.309 Sum_probs=54.1
Q ss_pred EeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EE---C-------------CCCCeEEEe-cCCEEEEEEccCCC
Q psy12421 61 TFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--RE---L-------------SKRDYSMSY-SDGVVSMEIIDCKP 121 (168)
Q Consensus 61 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~---~-------------~~~~~~~~~-~~~~~~l~i~~~~~ 121 (168)
...+....+.+|+++.|.|.+. .+.+.+.|+++. .. + ...++.+.. ..+..+|.|.+++.
T Consensus 3 ~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 3 TQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp EEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred ccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 3456667889999999999985 468899999853 10 0 012333322 23456899999999
Q ss_pred CCCeEEEEEEEeCC
Q psy12421 122 EDSGEYKCVATNKH 135 (168)
Q Consensus 122 ~d~G~Y~C~a~n~~ 135 (168)
+|+|.|.|.+.|..
T Consensus 82 ~D~G~Y~C~~~~~~ 95 (238)
T 1bec_A 82 SQTSVYFCASGGGR 95 (238)
T ss_dssp GGCEEEEEEEESCT
T ss_pred ccCEEEEEEEecCC
Confidence 99999999999874
No 466
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.79 E-value=7.4e-09 Score=63.95 Aligned_cols=71 Identities=23% Similarity=0.513 Sum_probs=52.4
Q ss_pred cCCeEEecCCcEEEEEEEe-ccCCCeeEEEeCC--E---ECC----------------CCCeEEEecCCEEEEEEccCCC
Q psy12421 64 LRPRVMQVRQTCKLLCCLS-GKPPPTVKWYKGN--R---ELS----------------KRDYSMSYSDGVVSMEIIDCKP 121 (168)
Q Consensus 64 ~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~~~--~---~~~----------------~~~~~~~~~~~~~~l~i~~~~~ 121 (168)
+....+.+|++++|.|.+. +.+.+.+.|++.. . .+. ..++......+..+|.|.+++.
T Consensus 6 p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~ 85 (111)
T 2qhl_A 6 LHVKTVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGTRE 85 (111)
T ss_dssp CEEEECCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEESSCCG
T ss_pred CceEEEeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEEEEECCCCh
Confidence 3346677899999999987 7777889999842 1 110 2334444344556899999999
Q ss_pred CCCeEEEEEEEeC
Q psy12421 122 EDSGEYKCVATNK 134 (168)
Q Consensus 122 ~d~G~Y~C~a~n~ 134 (168)
+|+|.|.|.+.+.
T Consensus 86 ~DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 86 DDGGEYFCGEVEG 98 (111)
T ss_dssp GGCEEEEEEEEET
T ss_pred hHCEEEEEEEccC
Confidence 9999999999875
No 467
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.79 E-value=1.4e-09 Score=75.03 Aligned_cols=85 Identities=20% Similarity=0.338 Sum_probs=54.6
Q ss_pred cccCCCeEEeecCCeEEecCCcEEEEEEEec-cCCC-eeEEEeCCEECCCCC--eEEEecCCE----EEEEEccCCCCCC
Q psy12421 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPP-TVKWYKGNRELSKRD--YSMSYSDGV----VSMEIIDCKPEDS 124 (168)
Q Consensus 53 ~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p-~i~W~~~~~~~~~~~--~~~~~~~~~----~~l~i~~~~~~d~ 124 (168)
.+..+|.+...+.......|+.+.|.|.+.| .|.+ .+.|++++..+.... ......++. ..|.+......|.
T Consensus 113 ~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~ 192 (218)
T 2rgs_A 113 GLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKT 192 (218)
T ss_dssp CCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHC
T ss_pred CCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCC
Confidence 4456787765544432235899999999998 5665 899999998764311 011122331 1244444444568
Q ss_pred eEEEEEEEeCCcc
Q psy12421 125 GEYKCVATNKHGT 137 (168)
Q Consensus 125 G~Y~C~a~n~~g~ 137 (168)
|.|+|.|.|....
T Consensus 193 g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 193 DSFSCNVRHEGLK 205 (218)
T ss_dssp SCEEEEEECTTSG
T ss_pred CeEEEEEEcCCCC
Confidence 9999999998654
No 468
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.78 E-value=4.3e-08 Score=61.73 Aligned_cols=77 Identities=23% Similarity=0.340 Sum_probs=55.7
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EE---C----------CCCCeEEEecCCEEEEEEccCC
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RE---L----------SKRDYSMSYSDGVVSMEIIDCK 120 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~---~----------~~~~~~~~~~~~~~~l~i~~~~ 120 (168)
|.+.. +....+.+|++++|.|...+.+ ...+.||+.. .. + ...++..........|.|.+++
T Consensus 2 p~v~Q-p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~ 80 (123)
T 3t0v_A 2 PVLTQ-SPSVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSGTSASLAISGLR 80 (123)
T ss_dssp CSBEE-CCCEEECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCC
T ss_pred CccCc-cCeEEEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccCCEEEEEECCCC
Confidence 34444 5578899999999999987754 4689999842 11 1 0134444434556789999999
Q ss_pred CCCCeEEEEEEEeCC
Q psy12421 121 PEDSGEYKCVATNKH 135 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~~ 135 (168)
.+|+|.|.|.+.+..
T Consensus 81 ~~DsG~Y~C~~~~~~ 95 (123)
T 3t0v_A 81 SEDEADYYCLSWDDS 95 (123)
T ss_dssp GGGCEEEEEEEEETT
T ss_pred HHHCEEEEEEEEcCC
Confidence 999999999998764
No 469
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.78 E-value=7.4e-08 Score=60.47 Aligned_cols=74 Identities=19% Similarity=0.333 Sum_probs=53.4
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EE----CC-CCCeEEE--ecCCEEEEEEccCCCCCCeEEE
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RE----LS-KRDYSMS--YSDGVVSMEIIDCKPEDSGEYK 128 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~----~~-~~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~ 128 (168)
+...+....+.+|++++|.|.+.+.. .+.+.||+.. .. +. ..++... ...+...|.|.+++.+|+|.|.
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 82 (121)
T 2i24_N 3 VDQTPQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRGSKSFSLRINDLTVKDSGTYR 82 (121)
T ss_dssp EEEECSEEEEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred cEECCcEEEEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEecCCCCEEEEEECCCChhhCEEEE
Confidence 34456677889999999999997653 5679999853 11 11 2334332 2345668999999999999999
Q ss_pred EEEEe
Q psy12421 129 CVATN 133 (168)
Q Consensus 129 C~a~n 133 (168)
|.+..
T Consensus 83 C~~~~ 87 (121)
T 2i24_N 83 CKPES 87 (121)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99875
No 470
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.78 E-value=5.6e-09 Score=72.68 Aligned_cols=120 Identities=10% Similarity=0.161 Sum_probs=71.4
Q ss_pred CceeEEEEeCCCCCCCCCCccc-----ceeccCcceeeEeee-cccCCCeEEe-ecCCeEEecCCcEEEEEEEec-cCCC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQ-----QVRRREPLQITFWQE-TVESAPNFTF-LLRPRVMQVRQTCKLLCCLSG-KPPP 87 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g-~p~p 87 (168)
.|.+.+++..|.|. |.|... .........+.+... ....+|.+.. .+....+..|+.+.|.|.+.| .|.+
T Consensus 76 sL~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 153 (240)
T 3q5y_A 76 EMNMSALELEDSAM--YFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDH 153 (240)
T ss_dssp EEEECSCCGGGCEE--EEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEECcCChhHCEE--EEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCC
Confidence 36677788888666 433322 011112222222210 1235566553 333334556899999999998 5656
Q ss_pred -eeEEEeCCEECCCCCeE----EEecCCE----EEEEEccCCCCC-CeEEEEEEEeCCcc
Q psy12421 88 -TVKWYKGNRELSKRDYS----MSYSDGV----VSMEIIDCKPED-SGEYKCVATNKHGT 137 (168)
Q Consensus 88 -~i~W~~~~~~~~~~~~~----~~~~~~~----~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 137 (168)
.+.|+++|..+...... ....++. ..|.|......| .|.|+|.|.|....
T Consensus 154 ~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 154 VELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp EEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred eEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 78999999987542211 1222332 237888888888 77999999987654
No 471
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.77 E-value=9.2e-09 Score=70.61 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=67.1
Q ss_pred CceeEEEEeCCCCCCCCCCccccee-----ccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-e
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQVR-----RREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-T 88 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~ 88 (168)
.|.+.+++..|.+. |.|...... ......+.+.. ....+|.+........+..|+.+.|.|.+.|. |.| .
T Consensus 79 ~L~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~L~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~ 155 (215)
T 1c5d_H 79 FLKMNSLQTEDTAI--YFCTREDGWNYFDYWGPGTMVTVSS-AQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVT 155 (215)
T ss_dssp EEEESSCCGGGCEE--EEEEECCSSSCSCCBCCCEEEEECS-SCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCE
T ss_pred EEEECCCCcccCEE--EEEEEecCCcccceEcCCEEEEecC-CCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcE
Confidence 45666777778666 433222111 01112222221 11235666543333335679999999999986 877 9
Q ss_pred eEEEeCCEECCCCCeEEEecCCEEEE--EEccCCCCCCeEEEEEEEeCCcceEEEE
Q psy12421 89 VKWYKGNRELSKRDYSMSYSDGVVSM--EIIDCKPEDSGEYKCVATNKHGTDETNC 142 (168)
Q Consensus 89 i~W~~~~~~~~~~~~~~~~~~~~~~l--~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 142 (168)
+.|++++..+..........++...+ .+......| |.|+|.|.|..|......
T Consensus 156 v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 156 VTWNSGALSSDVHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp EEEGGGTTCCSCCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred EEEccCCccCceEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEE
Confidence 99999886543211111111232221 122333345 999999999988765433
No 472
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.77 E-value=6.7e-08 Score=66.08 Aligned_cols=74 Identities=22% Similarity=0.391 Sum_probs=54.2
Q ss_pred EeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--E---EC--------CCCCeEEEec---CCEEEEEEccCCCCCC
Q psy12421 61 TFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--R---EL--------SKRDYSMSYS---DGVVSMEIIDCKPEDS 124 (168)
Q Consensus 61 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~---~~--------~~~~~~~~~~---~~~~~l~i~~~~~~d~ 124 (168)
...+....+.+|+++.|.|.+.+.+ +.+.|+++. . .+ ...++.+... .+..+|.|.+++.+|+
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~ 83 (207)
T 1ypz_E 5 EQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS 83 (207)
T ss_dssp EESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC
T ss_pred EECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC
Confidence 3455567889999999999998754 589999853 1 11 1234444432 4556899999999999
Q ss_pred eEEEEEEEeCC
Q psy12421 125 GEYKCVATNKH 135 (168)
Q Consensus 125 G~Y~C~a~n~~ 135 (168)
|.|.|.+.+..
T Consensus 84 G~Y~C~~~~~~ 94 (207)
T 1ypz_E 84 GTYFCAADTWH 94 (207)
T ss_dssp EEEEEEEECBC
T ss_pred EEEEEEEecCC
Confidence 99999999864
No 473
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.77 E-value=4.7e-08 Score=70.26 Aligned_cols=74 Identities=23% Similarity=0.361 Sum_probs=54.4
Q ss_pred eecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EECC------------------CCCeEEEe--cCCEEEEEEc
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RELS------------------KRDYSMSY--SDGVVSMEII 117 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~~------------------~~~~~~~~--~~~~~~l~i~ 117 (168)
..+....+.+|++++|.|.+.+.+ .+.+.|+++. ..+. ..++.+.. ..+..+|.|.
T Consensus 27 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 106 (291)
T 2gki_A 27 QQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELS 106 (291)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEEC
T ss_pred EcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEEC
Confidence 345578899999999999998876 6899999853 1110 12333322 2345589999
Q ss_pred cCCCCCCeEEEEEEEeCC
Q psy12421 118 DCKPEDSGEYKCVATNKH 135 (168)
Q Consensus 118 ~~~~~d~G~Y~C~a~n~~ 135 (168)
+++.+|+|.|.|.+.|..
T Consensus 107 ~v~~~DsG~Y~C~~~~~~ 124 (291)
T 2gki_A 107 SLTSEDSAVYYCARGAYK 124 (291)
T ss_dssp SCCGGGCEEEEEEEECGG
T ss_pred cCCHHHCEEEEEEEeccc
Confidence 999999999999999874
No 474
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.77 E-value=5.4e-09 Score=71.42 Aligned_cols=70 Identities=14% Similarity=0.256 Sum_probs=51.5
Q ss_pred EecCCcEEEEEEEeccC----CCeeEEEeCCEECCCCCe--EEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcce
Q psy12421 69 MQVRQTCKLLCCLSGKP----PPTVKWYKGNRELSKRDY--SMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTD 138 (168)
Q Consensus 69 ~~~g~~~~l~C~~~g~p----~p~i~W~~~~~~~~~~~~--~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 138 (168)
+.+|+++.|.|.+.|.+ .+.+.|++++..+..... .....++ ...|.|.+++..|.|.|.|.|.|..|..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 77899999999999884 248999999876542110 0001111 2368899999999999999999998864
No 475
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.77 E-value=8.3e-09 Score=73.20 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=70.0
Q ss_pred CceeEEEEeCCCCCCCCCCcccce-----eccCcceeeEeeecccCCCeEEeecCCeEEecCCcEEEEEEEecc-CCC-e
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQV-----RRREPLQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGK-PPP-T 88 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~ 88 (168)
.|.+.+++..|.+. |.|..... .......+.+.. ....+|.+........+..|+.+.|.|.+.+. |.+ .
T Consensus 86 sL~I~~v~~~DsG~--Y~C~~~~~~~~~~~~~~~~~L~V~~-~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~ 162 (261)
T 2xqy_G 86 YIQLSSLTSEDSAV--YYCGRLGYVYGFDYWGQGTTLTVSS-AKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVT 162 (261)
T ss_dssp EEEECSCCGGGCEE--EEEEEECTTSSEEEECCCEEEEECS-SCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCE
T ss_pred EEEEcCCCcccCeE--EEEEEecCCCcceEECCCEEEEEcc-CCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCE
Confidence 35566777778666 43322211 001112222221 11235666543333345679999999999885 766 9
Q ss_pred eEEEeCCEECCCC-CeEEEecC---CEEEEEEccCCCCCCeEEEEEEEeCCcceEEEEEE
Q psy12421 89 VKWYKGNRELSKR-DYSMSYSD---GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144 (168)
Q Consensus 89 i~W~~~~~~~~~~-~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 144 (168)
+.|++++..+... .......+ ....|.|......| |.|+|.|.|..........+
T Consensus 163 v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~~~~ 221 (261)
T 2xqy_G 163 LTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKI 221 (261)
T ss_dssp EEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEEEEe
Confidence 9999988654210 00111111 12368888888877 99999999976654443333
No 476
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.76 E-value=5.6e-08 Score=66.78 Aligned_cols=85 Identities=20% Similarity=0.287 Sum_probs=57.1
Q ss_pred ecCCeEEecCCcEEEEEEEecc--CCCeeEEEeCCE--E---C-----------------CCCCeEEEe--cCCEEEEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKGNR--E---L-----------------SKRDYSMSY--SDGVVSMEI 116 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~~--~---~-----------------~~~~~~~~~--~~~~~~l~i 116 (168)
.+....+.+|+++.|.|.+.+. +.+.+.|++... . + ...++.+.. ..+..+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 6 ESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp EESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 4455778899999999999874 368999997421 0 0 012333322 134557999
Q ss_pred ccCCCCCCeEEEEEEEeCC--cceEEEEEEEEe
Q psy12421 117 IDCKPEDSGEYKCVATNKH--GTDETNCVVIVE 147 (168)
Q Consensus 117 ~~~~~~d~G~Y~C~a~n~~--g~~~~~~~l~v~ 147 (168)
.+++.+|+|.|.|.+.|.. ........|.|.
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~ 118 (221)
T 3m8o_H 86 NSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVS 118 (221)
T ss_dssp CSCCGGGCEEEEEEEESCTTCCCBBCCEEEEEC
T ss_pred CCCCHHHCEEEEEEEECCChhheECCCEEEEEe
Confidence 9999999999999999863 122233455554
No 477
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.76 E-value=1.7e-08 Score=62.39 Aligned_cols=74 Identities=18% Similarity=0.313 Sum_probs=52.0
Q ss_pred EEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--E---EC---CC-----------CCeEEEecCCEEEEEEccCC
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--R---EL---SK-----------RDYSMSYSDGVVSMEIIDCK 120 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~---~~---~~-----------~~~~~~~~~~~~~l~i~~~~ 120 (168)
+...+....+.+|++++|.|...+.+.+.+.||+.. . .+ .. .++......+. .|.|.+++
T Consensus 4 v~q~p~~~~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~-~L~I~~~~ 82 (112)
T 1fo0_B 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDT-ELRLQVAN 82 (112)
T ss_dssp EEEECSEEECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETT-EEEEEEES
T ss_pred EEeCCCeEEEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCC-eEEEcCCC
Confidence 344556678889999999999977777899999842 1 11 00 12222212222 79999999
Q ss_pred CCCCeEEEEEEEeC
Q psy12421 121 PEDSGEYKCVATNK 134 (168)
Q Consensus 121 ~~d~G~Y~C~a~n~ 134 (168)
.+|+|.|.|.+.+.
T Consensus 83 ~~Dsg~Y~C~~~~~ 96 (112)
T 1fo0_B 83 MSQGRTLYCTCSAD 96 (112)
T ss_dssp CCSCEEEEEEEESS
T ss_pred HhHCEEEEEEEEcC
Confidence 99999999998864
No 478
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.75 E-value=3.2e-08 Score=61.32 Aligned_cols=71 Identities=21% Similarity=0.356 Sum_probs=51.8
Q ss_pred ecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCCE--------EC---------------CCCCeEEEe--cCCEEEEEE
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGNR--------EL---------------SKRDYSMSY--SDGVVSMEI 116 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~~--------~~---------------~~~~~~~~~--~~~~~~l~i 116 (168)
.+....+.+|++++|.|...+. +...+.|++... .+ ...++.+.. ..+..+|.|
T Consensus 4 ~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (115)
T 2atp_B 4 TPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSI 83 (115)
T ss_dssp ECSEEEECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEEE
T ss_pred CCCCEEEcCCCcEEEEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEEE
Confidence 4556778899999999998764 567899998542 11 013344433 333457999
Q ss_pred ccCCCCCCeEEEEEEEe
Q psy12421 117 IDCKPEDSGEYKCVATN 133 (168)
Q Consensus 117 ~~~~~~d~G~Y~C~a~n 133 (168)
.+++.+|+|.|.|.+.+
T Consensus 84 ~~~~~~DsG~Y~C~~~~ 100 (115)
T 2atp_B 84 MNVKPEDSDFYFCATVG 100 (115)
T ss_dssp CSCCGGGCEEEEEEEEC
T ss_pred CCCCHHHCEEEEEeEcc
Confidence 99999999999999875
No 479
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.75 E-value=3.6e-09 Score=73.45 Aligned_cols=91 Identities=18% Similarity=0.189 Sum_probs=55.2
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEeccCC--CeeEEEeCCEECCCCC-eEEEecCC----EEEEEEccCCCCCCeEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPP--PTVKWYKGNRELSKRD-YSMSYSDG----VVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~~~~~~~~~~~-~~~~~~~~----~~~l~i~~~~~~d~G~Y 127 (168)
..+|.+........+..|+.+.|.|.+.+.++ ..+.|++++..+.... ......++ .+.|.|......| |.|
T Consensus 130 ~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~y 208 (232)
T 3qhz_H 130 TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY 208 (232)
T ss_dssp CBCCEEEEECC-------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCC
T ss_pred CCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEE
Confidence 35677664444445567999999999998554 3577999886332100 00111122 1257888888888 999
Q ss_pred EEEEEeCCcceEEEEEEEE
Q psy12421 128 KCVATNKHGTDETNCVVIV 146 (168)
Q Consensus 128 ~C~a~n~~g~~~~~~~l~v 146 (168)
+|.+.|..+.......|.+
T Consensus 209 tC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 209 ICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp EEEEEEGGGTEEEEEECCC
T ss_pred EEEEEeCCCCccEEEEeCC
Confidence 9999999887766666554
No 480
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=98.75 E-value=5e-08 Score=60.52 Aligned_cols=75 Identities=20% Similarity=0.319 Sum_probs=54.3
Q ss_pred EEeecCCeEEecCCcEEEEEEEecc-CCCeeEEEeC--CE-----EC----C----------CCCeEEEecCCEEEEEEc
Q psy12421 60 FTFLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKG--NR-----EL----S----------KRDYSMSYSDGVVSMEII 117 (168)
Q Consensus 60 ~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~--~~-----~~----~----------~~~~~~~~~~~~~~l~i~ 117 (168)
+...+....+.+|++++|.|...+. +...+.||+. +. .+ . ..++......+..+|.|.
T Consensus 3 ~~q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~~~~~~~L~I~ 82 (114)
T 2hp4_A 3 FRVSPLDRTWNLGETVELKCQVLLSNPTSGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKRLGDTFVLTLS 82 (114)
T ss_dssp EEEECCSCCCCTTCCEEEEEEECCSSCCSCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEEETTEEEEEES
T ss_pred cEeCCCEEEEcCCCCEEEEEEeecCCCCceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEecCCEEEEEEC
Confidence 4456667788899999999998754 3678999973 22 11 0 123433334455679999
Q ss_pred cCCCCCCeEEEEEEEeC
Q psy12421 118 DCKPEDSGEYKCVATNK 134 (168)
Q Consensus 118 ~~~~~d~G~Y~C~a~n~ 134 (168)
+++.+|+|.|.|.+.+.
T Consensus 83 ~~~~~Dsg~Y~C~~~~~ 99 (114)
T 2hp4_A 83 DFRRENEGYYFCSALSN 99 (114)
T ss_dssp SCCGGGCEEEEEEEEET
T ss_pred CCCHHHCEEEEEEEecC
Confidence 99999999999998874
No 481
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.75 E-value=4e-08 Score=60.63 Aligned_cols=71 Identities=15% Similarity=0.237 Sum_probs=51.5
Q ss_pred eecCCeEEecCCcEEEEEEEeccCCCeeEEEeCCE-----ECC----------CCCeEEE--ecCCEEEEEEccCCCCCC
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR-----ELS----------KRDYSMS--YSDGVVSMEIIDCKPEDS 124 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~-----~~~----------~~~~~~~--~~~~~~~l~i~~~~~~d~ 124 (168)
..+....+.+|++++|.|.+.+.+.+.+.|++... .+. ..++.+. ...+..+|.|.+++.+|+
T Consensus 5 q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~Ds 84 (112)
T 2z35_A 5 QTGGQVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDS 84 (112)
T ss_dssp CSCSEEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTC
T ss_pred eCCCcEEEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhC
Confidence 34556788899999999999887788999998531 110 1233332 122344699999999999
Q ss_pred eEEEEEEE
Q psy12421 125 GEYKCVAT 132 (168)
Q Consensus 125 G~Y~C~a~ 132 (168)
|.|.|.+.
T Consensus 85 G~Y~C~~~ 92 (112)
T 2z35_A 85 AVYYCALS 92 (112)
T ss_dssp SEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999987
No 482
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.74 E-value=5.9e-08 Score=73.43 Aligned_cols=86 Identities=21% Similarity=0.288 Sum_probs=60.0
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EEC------------------CCCCeEEEe--cCCEEEEEEcc
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--REL------------------SKRDYSMSY--SDGVVSMEIID 118 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~~------------------~~~~~~~~~--~~~~~~l~i~~ 118 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.|+++. ..+ ...++.+.. ..+..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (444)
T 1igt_B 6 ESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSR 85 (444)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECC
Confidence 45567889999999999998764 6789999852 211 012333332 23456899999
Q ss_pred CCCCCCeEEEEEEEeCCcce---EEEEEEEEee
Q psy12421 119 CKPEDSGEYKCVATNKHGTD---ETNCVVIVES 148 (168)
Q Consensus 119 ~~~~d~G~Y~C~a~n~~g~~---~~~~~l~v~~ 148 (168)
++.+|+|.|.|.+.|..+.. .....|.|..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (444)
T 1igt_B 86 LKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSS 118 (444)
T ss_dssp CCGGGCEEEEEEEECSSSCEEEEBCCEEEEECS
T ss_pred CCHHHCEEEEEEEecCCcccccccCcEEEEecC
Confidence 99999999999999976542 1234566653
No 483
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.74 E-value=4.1e-09 Score=74.61 Aligned_cols=120 Identities=12% Similarity=0.145 Sum_probs=69.3
Q ss_pred CceeEEEEeCCCCCCCCCCcccc----eeccCcceeeEee-ecccCCCeEEe-ecCCeEEecCCcEEEEEEEeccCCC--
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQ----VRRREPLQITFWQ-ETVESAPNFTF-LLRPRVMQVRQTCKLLCCLSGKPPP-- 87 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p-- 87 (168)
.|.+.+++..|.|. |.|.... ........+.+.. .....+|.+.. .+....+..|+.+.|.|.+.|.+++
T Consensus 101 sL~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~ 178 (268)
T 3pl6_D 101 TLKIQRTERGDSAV--YLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 178 (268)
T ss_dssp EEEECSCCGGGCEE--EEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred EEEECCCCcccCEE--EEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCe
Confidence 36677788888666 4333221 0111122222221 11223566543 3333445568999999999986665
Q ss_pred eeEEEeCCEECCCCCeEE---E-----ecCC----EEEEEEccCCCCC-CeEEEEEEEeCCcc
Q psy12421 88 TVKWYKGNRELSKRDYSM---S-----YSDG----VVSMEIIDCKPED-SGEYKCVATNKHGT 137 (168)
Q Consensus 88 ~i~W~~~~~~~~~~~~~~---~-----~~~~----~~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 137 (168)
.+.|+++|..+....... . ..++ ...|.+......| .|.|+|.+.|....
T Consensus 179 ~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 179 ELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp EEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 899999998775421100 0 0111 1246777776666 99999999998654
No 484
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.73 E-value=5.5e-08 Score=60.41 Aligned_cols=72 Identities=19% Similarity=0.286 Sum_probs=52.7
Q ss_pred eecCCeEEecCCcEEEEEEEecc-CCCeeEEEeCC--E---EC-----C------CCCeEEE--ecCCEEEEEEccCCCC
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGK-PPPTVKWYKGN--R---EL-----S------KRDYSMS--YSDGVVSMEIIDCKPE 122 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~~~~--~---~~-----~------~~~~~~~--~~~~~~~l~i~~~~~~ 122 (168)
..+....+.+|++++|.|...+. +.+.+.|++.. . .+ . ..++.+. ...+...|.|.+++.+
T Consensus 5 q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 84 (116)
T 1fo0_A 5 QTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIE 84 (116)
T ss_dssp CCCCEEEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGG
T ss_pred cCCCcEEEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 34556788899999999999876 66689999852 1 11 0 1233332 2345668999999999
Q ss_pred CCeEEEEEEEe
Q psy12421 123 DSGEYKCVATN 133 (168)
Q Consensus 123 d~G~Y~C~a~n 133 (168)
|+|.|.|.+.+
T Consensus 85 DsG~Y~C~~~~ 95 (116)
T 1fo0_A 85 DSAVYFCAMRG 95 (116)
T ss_dssp GCEEEEEEEEC
T ss_pred hCEEEEEEEEc
Confidence 99999999987
No 485
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.73 E-value=7.8e-08 Score=68.09 Aligned_cols=76 Identities=26% Similarity=0.368 Sum_probs=54.0
Q ss_pred CeEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EEC------------CCC-----CeEEEe-cCCEEEEEEc
Q psy12421 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--REL------------SKR-----DYSMSY-SDGVVSMEII 117 (168)
Q Consensus 58 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~------------~~~-----~~~~~~-~~~~~~l~i~ 117 (168)
+.+...+....+.+|+++.|.|.+.+ +.+.+.|++.. ..+ ... ++.... ..+..+|.|.
T Consensus 28 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 106 (270)
T 3qib_D 28 MKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQ 106 (270)
T ss_dssp CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEES
T ss_pred eeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEEC
Confidence 44555666788999999999999865 78899999832 100 000 222221 2335589999
Q ss_pred cCCCCCCeEEEEEEEeC
Q psy12421 118 DCKPEDSGEYKCVATNK 134 (168)
Q Consensus 118 ~~~~~d~G~Y~C~a~n~ 134 (168)
+++.+|+|.|.|.+.+.
T Consensus 107 ~v~~~D~G~Y~C~~~~~ 123 (270)
T 3qib_D 107 SSEAGDSALYLCASSLN 123 (270)
T ss_dssp SCCGGGCEEEEEEEESC
T ss_pred CCCHhHCeEEEEEEecC
Confidence 99999999999999964
No 486
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.72 E-value=9.9e-08 Score=66.27 Aligned_cols=71 Identities=17% Similarity=0.327 Sum_probs=52.1
Q ss_pred ecCCeEEecCCcEEEEEEEeccC--CCeeEEEeCC--EE---C--------------CCCCeEEEe--cCCEEEEEEccC
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP--PPTVKWYKGN--RE---L--------------SKRDYSMSY--SDGVVSMEIIDC 119 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~~~~--~~---~--------------~~~~~~~~~--~~~~~~l~i~~~ 119 (168)
.+....+.+|+++.|.|.+.+.+ .+.+.||++. .. + ...++.+.. ..+..+|.|.++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (232)
T 1dn0_B 6 QWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSV 85 (232)
T ss_dssp EECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCC
Confidence 44557888999999999998865 6789999853 11 1 013343332 234568999999
Q ss_pred CCCCCeEEEEEEEe
Q psy12421 120 KPEDSGEYKCVATN 133 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n 133 (168)
+.+|+|.|.|.+.+
T Consensus 86 ~~~D~G~Y~C~~~~ 99 (232)
T 1dn0_B 86 TAADTAVYYCARPP 99 (232)
T ss_dssp CGGGCEEEEEEECS
T ss_pred CcccCEEEEEEEec
Confidence 99999999999984
No 487
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.72 E-value=4e-09 Score=73.77 Aligned_cols=77 Identities=12% Similarity=0.280 Sum_probs=51.3
Q ss_pred EEecCCcEEEEEEEecc-CC-CeeEEEeCCE-ECCCCCe-EEEecCC----EEEEEEccCCCCCCeEEEEEEEeCCcceE
Q psy12421 68 VMQVRQTCKLLCCLSGK-PP-PTVKWYKGNR-ELSKRDY-SMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDE 139 (168)
Q Consensus 68 ~~~~g~~~~l~C~~~g~-p~-p~i~W~~~~~-~~~~~~~-~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 139 (168)
.+..|+.+.|.|.+.|. |. +.+.|++++. .+..... .....++ ...|.|..... + |.|+|.+.|..+...
T Consensus 143 ~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~ 220 (242)
T 1hxm_B 143 ETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNG 220 (242)
T ss_dssp GGGSSSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGG
T ss_pred hcccCCCceEEEEEeeEECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCC
Confidence 34569999999999986 64 7899999986 4532110 0111222 13577776654 4 999999999988765
Q ss_pred EEEEEEE
Q psy12421 140 TNCVVIV 146 (168)
Q Consensus 140 ~~~~l~v 146 (168)
....+.+
T Consensus 221 ~~~~~~~ 227 (242)
T 1hxm_B 221 VDQEIIF 227 (242)
T ss_dssp SCEEEEE
T ss_pred ceeEeec
Confidence 5555554
No 488
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.71 E-value=2.8e-08 Score=77.66 Aligned_cols=117 Identities=12% Similarity=0.129 Sum_probs=69.7
Q ss_pred CCCceeEEEEeCCCCCCCCCCcccceeccCcce-eeEeeeccc---CCCeEEeecCCeEEecCCc-EEEEEEEec-cCCC
Q psy12421 14 PQDNPRLRTRAIPKTIPAYVPEVQQVRRREPLQ-ITFWQETVE---SAPNFTFLLRPRVMQVRQT-CKLLCCLSG-KPPP 87 (168)
Q Consensus 14 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~p~~~~~~~~~~~~~g~~-~~l~C~~~g-~p~p 87 (168)
...|.+.+++..|.+. |.| .+.+..... .......+. ..|.+.. ....+..+.. +.|.|.+.+ .|.|
T Consensus 431 ~~~L~i~~v~~~D~G~--Y~C---~~~n~~~~~~~~~~~l~V~~~~~~p~i~~--~~~~~~~~~~~~~l~C~~~~~~P~~ 503 (581)
T 3o3u_N 431 NGSLFLPAVGIQDEGI--FRC---QAMNRNGKETKSNYRVRVYQIPGKPEIVD--SASELTAGVPNKVGTCVSEGSYPAG 503 (581)
T ss_dssp TSCEEESSCCGGGCEE--EEE---EEECTTSCEEEEEEEEEEEBCCCCCEEES--CCSEECTTSCEEEEEEEEEEEBSCC
T ss_pred CceEEEeccccccCeE--EEE---EEEcCCCceeEEEEEEEEEcCCCCCEEEc--CCcccccCCceeEEEEECCCCCCCC
Confidence 3467788888888666 432 233322221 111122222 2344432 2233555554 467999988 6999
Q ss_pred eeEEEeCCEECCCC--CeEEE----e--cCC----EEEEEEccCC-CCCCeEEEEEEEeCCcc
Q psy12421 88 TVKWYKGNRELSKR--DYSMS----Y--SDG----VVSMEIIDCK-PEDSGEYKCVATNKHGT 137 (168)
Q Consensus 88 ~i~W~~~~~~~~~~--~~~~~----~--~~~----~~~l~i~~~~-~~d~G~Y~C~a~n~~g~ 137 (168)
.+.|++++..+... ...+. . ..+ .++|.|..++ ..+.|.|+|.+.|..+.
T Consensus 504 ~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 504 TLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp EEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred eEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 99999999988642 22111 1 111 2468898888 44588999999999754
No 489
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.71 E-value=6.6e-09 Score=72.61 Aligned_cols=91 Identities=19% Similarity=0.231 Sum_probs=57.9
Q ss_pred cCCCeEEeecCCeEEecCCcEEEEEEEec-cCCC-eeEEEeCCEECCCCC-eEEEecCC----EEEEEEccCCCCCCeEE
Q psy12421 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSG-KPPP-TVKWYKGNRELSKRD-YSMSYSDG----VVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 55 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p-~i~W~~~~~~~~~~~-~~~~~~~~----~~~l~i~~~~~~d~G~Y 127 (168)
..+|.+........+..|+.+.|.|.+.+ .|.+ .+.|++++..+.... ......++ ...|.|......| |.|
T Consensus 138 ~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~y 216 (239)
T 3tv3_H 138 TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY 216 (239)
T ss_dssp CBCCEEEEECCCCCC--TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCC
T ss_pred CcCCEEEEECCChhhccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEE
Confidence 45677765544444557999999999988 4544 478999886432100 00111122 1257788888888 999
Q ss_pred EEEEEeCCcceEEEEEEEE
Q psy12421 128 KCVATNKHGTDETNCVVIV 146 (168)
Q Consensus 128 ~C~a~n~~g~~~~~~~l~v 146 (168)
+|.+.|..+.......|.+
T Consensus 217 tC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 217 ICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EEEEEEGGGTEEEEEECCC
T ss_pred EEEEEECCCCceEEEEecc
Confidence 9999998877666555544
No 490
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.71 E-value=5.2e-08 Score=62.37 Aligned_cols=70 Identities=19% Similarity=0.247 Sum_probs=52.1
Q ss_pred CeEEecCCcEEEEEEEeccC---CCeeEEEeCCE-----EC----------CCCCeEEEecCCEEEEEEccCCCCCCeEE
Q psy12421 66 PRVMQVRQTCKLLCCLSGKP---PPTVKWYKGNR-----EL----------SKRDYSMSYSDGVVSMEIIDCKPEDSGEY 127 (168)
Q Consensus 66 ~~~~~~g~~~~l~C~~~g~p---~p~i~W~~~~~-----~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 127 (168)
...+.+|++++|.|.+...+ .+.+.||+... .+ ...++..........|.|.+++.+|+|.|
T Consensus 14 ~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~sL~I~~v~~~DsG~Y 93 (135)
T 1p4b_L 14 ALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIY 93 (135)
T ss_dssp EEEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCEEE
T ss_pred cEEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCCEEEEEECCCChhHCEEE
Confidence 47788999999999997754 57799998531 11 02344444445566899999999999999
Q ss_pred EEEEEeCC
Q psy12421 128 KCVATNKH 135 (168)
Q Consensus 128 ~C~a~n~~ 135 (168)
.|.+.+..
T Consensus 94 ~C~~~~~~ 101 (135)
T 1p4b_L 94 FCALWYSN 101 (135)
T ss_dssp EEEEECSS
T ss_pred EEEEecCC
Confidence 99998753
No 491
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.69 E-value=3.3e-08 Score=69.49 Aligned_cols=74 Identities=19% Similarity=0.332 Sum_probs=51.9
Q ss_pred eecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--EE---C---CC----------C-CeEEEecCCEEEEEEccCCCC
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--RE---L---SK----------R-DYSMSYSDGVVSMEIIDCKPE 122 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~---~---~~----------~-~~~~~~~~~~~~l~i~~~~~~ 122 (168)
..+....+.+|+++.|.|.+.+.+.+.+.||+.. .. + .. . ++......... |.|.+++.+
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~ 84 (253)
T 3to4_D 6 QNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMS 84 (253)
T ss_dssp EECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCS
T ss_pred eCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChh
Confidence 3455678889999999999888899999999831 10 0 00 0 22222222222 899999999
Q ss_pred CCeEEEEEEEeCCc
Q psy12421 123 DSGEYKCVATNKHG 136 (168)
Q Consensus 123 d~G~Y~C~a~n~~g 136 (168)
|+|.|.|.+.+..+
T Consensus 85 DsG~Y~C~~~~~~~ 98 (253)
T 3to4_D 85 QGRTLYCTSSADHW 98 (253)
T ss_dssp SCEEEEEEEECSCC
T ss_pred hCeEEEEEEecCCC
Confidence 99999999987643
No 492
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.68 E-value=8.2e-09 Score=72.01 Aligned_cols=120 Identities=11% Similarity=0.130 Sum_probs=70.1
Q ss_pred CceeEEEEeCCCCCCCCCCcccc------eeccCcceeeEeee-cccCCCeEEe-ecCCeEEecCCcEEEEEEEecc-CC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQ------VRRREPLQITFWQE-TVESAPNFTF-LLRPRVMQVRQTCKLLCCLSGK-PP 86 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~-p~ 86 (168)
.|.+.+++..|.|. |.|.... ........+.+... ....+|.+.. .+....+..|+.+.|.|.+.|. |.
T Consensus 77 sL~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~ 154 (245)
T 4ei6_B 77 TLKIQPTALEDSAV--YFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD 154 (245)
T ss_dssp EEEECSCCGGGCEE--EEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSS
T ss_pred EEEECCCCHhHCEE--EEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCC
Confidence 46777888888666 4333221 11112222222210 1124565543 3333445569999999999984 44
Q ss_pred C-eeEEEeCCEECCCCCeEEE----e----cCCE----EEEEEccCCCCC-CeEEEEEEEeCCcc
Q psy12421 87 P-TVKWYKGNRELSKRDYSMS----Y----SDGV----VSMEIIDCKPED-SGEYKCVATNKHGT 137 (168)
Q Consensus 87 p-~i~W~~~~~~~~~~~~~~~----~----~~~~----~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 137 (168)
+ .+.|+++|..+........ . .++. ..|.|......| .|.|+|.+.|....
T Consensus 155 ~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 155 HVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp CEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 4 8999999988754221100 0 1221 247777777777 89999999997544
No 493
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.67 E-value=1e-08 Score=70.09 Aligned_cols=56 Identities=14% Similarity=0.333 Sum_probs=44.6
Q ss_pred EecCCcEEEEEEEeccCCCeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEEe
Q psy12421 69 MQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133 (168)
Q Consensus 69 ~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 133 (168)
+.+|+++.|.|.+ |.+.+.|+|++..+... ....+ .|.|.++...|+|.|+|.+.+
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~----~~~~~--~L~i~~v~~~DsG~Y~C~~~~ 70 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL----TEDKK--KWNLGSNAKDPRGMYQCKGSQ 70 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE----ESSCC--CEEEEEGGGCCEEEEEEESSS
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC----CCCCC--eEEeCCCCcCCCEEEEEEecC
Confidence 3579999999997 88999999999876421 11222 689999999999999999754
No 494
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.66 E-value=6.7e-08 Score=60.40 Aligned_cols=72 Identities=15% Similarity=0.252 Sum_probs=51.0
Q ss_pred ecCCeEEecCCcEEEEEEEeccC----CCeeEEEeCC----EECCC------CCeEEEe-----cCCEEEEEEccCCCCC
Q psy12421 63 LLRPRVMQVRQTCKLLCCLSGKP----PPTVKWYKGN----RELSK------RDYSMSY-----SDGVVSMEIIDCKPED 123 (168)
Q Consensus 63 ~~~~~~~~~g~~~~l~C~~~g~p----~p~i~W~~~~----~~~~~------~~~~~~~-----~~~~~~l~i~~~~~~d 123 (168)
.+....+.+|+++.|.|.+...+ ...+.|+++. ..+.. .++.... ..+..+|.|.+++.+|
T Consensus 13 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~D 92 (120)
T 3noi_A 13 QPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHD 92 (120)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGG
T ss_pred CCCEEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChhh
Confidence 34457788999999999988765 5579999975 32221 1222111 2334479999999999
Q ss_pred CeEEEEEEEeC
Q psy12421 124 SGEYKCVATNK 134 (168)
Q Consensus 124 ~G~Y~C~a~n~ 134 (168)
+|.|.|.+...
T Consensus 93 sG~Y~C~v~~~ 103 (120)
T 3noi_A 93 ASIYVCRVEVL 103 (120)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEEEC
Confidence 99999998854
No 495
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.66 E-value=8.1e-09 Score=73.22 Aligned_cols=121 Identities=10% Similarity=0.143 Sum_probs=69.8
Q ss_pred CceeEEEEeCCCCCCCCCCcccce------eccCcceeeEee-ecccCCCeEEe-ecCCeEEecCCcEEEEEEEec-cCC
Q psy12421 16 DNPRLRTRAIPKTIPAYVPEVQQV------RRREPLQITFWQ-ETVESAPNFTF-LLRPRVMQVRQTCKLLCCLSG-KPP 86 (168)
Q Consensus 16 ~~~~~~~~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g-~p~ 86 (168)
.|.+.+++..|.+. |.|....- .......+.+.. .....+|.+.. .+....+..|+.+.|.|.+.| .|.
T Consensus 102 sL~I~~v~~~D~G~--Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~ 179 (270)
T 3qib_D 102 SLEIQSSEAGDSAL--YLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD 179 (270)
T ss_dssp EEEESSCCGGGCEE--EEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSS
T ss_pred EEEECCCCHhHCeE--EEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCC
Confidence 46677888888666 43332210 011112222221 11223566543 333334456999999999998 666
Q ss_pred C-eeEEEeCCEECCCCCeEE--------EecCC----EEEEEEccCCCCC-CeEEEEEEEeCCcce
Q psy12421 87 P-TVKWYKGNRELSKRDYSM--------SYSDG----VVSMEIIDCKPED-SGEYKCVATNKHGTD 138 (168)
Q Consensus 87 p-~i~W~~~~~~~~~~~~~~--------~~~~~----~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~ 138 (168)
| .+.|+++|..+....... ...++ ...|.|......| .|.|+|.+.|.....
T Consensus 180 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 180 HVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp CEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBCT
T ss_pred CeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCCC
Confidence 6 799999998875421100 00112 1246777776667 999999999986543
No 496
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=98.65 E-value=2.7e-07 Score=56.10 Aligned_cols=85 Identities=13% Similarity=0.078 Sum_probs=55.9
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCC----CeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPP----PTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~----p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
+|.+...+ +..+..|+.++|.| ... .. ..+.|+|++..... ...........|.|..++..|+|.|.|...
T Consensus 9 kPsL~a~p-~~~v~~G~~VTL~C-~~~-~~~~~~~~f~l~k~g~~~~~--~~~~~~~~~a~f~i~~vt~~~aG~Y~C~~~ 83 (102)
T 4esk_A 9 DITIFPNS-SLMISQGTFVTVVC-SYS-DKHDLYNMVRLEKDGSTFME--KSTEPYKTEDEFEIGPVNETITGHYSCIYS 83 (102)
T ss_dssp EEEEECCS-EEEEETTCCEEEEE-ECT-TTGGGCCEEEEEETTEEEEE--EECCSSCSEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEEeC-CCcccCCCcEEEEE-CCC-cCCCcccEEEEEECCccccc--cccCCCCcceEEEeCcCCcccCeeEEEEEe
Confidence 34444333 35788899999999 643 33 57899999865421 010112334579999999999999999998
Q ss_pred eCCcceEE--EEEEEE
Q psy12421 133 NKHGTDET--NCVVIV 146 (168)
Q Consensus 133 n~~g~~~~--~~~l~v 146 (168)
+..+.... .+.|.|
T Consensus 84 ~~~~~S~~Sdpl~L~V 99 (102)
T 4esk_A 84 KGITWSERSKTLELKV 99 (102)
T ss_dssp ETTTEEEECCCEEEEE
T ss_pred CCCccccCcCCEEEEE
Confidence 87664332 334444
No 497
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=98.64 E-value=1.3e-07 Score=59.12 Aligned_cols=88 Identities=13% Similarity=0.066 Sum_probs=55.1
Q ss_pred CCeEEeecCCeEEecCCcEEEEEEEeccCC----CeeEEEeCCEECCCCCeEEEecCCEEEEEEccCCCCCCeEEEEEEE
Q psy12421 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPP----PTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132 (168)
Q Consensus 57 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~----p~i~W~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 132 (168)
+|.+...+ +..+..|+.++|.| .. ... -.+.|+|++..... ...........|.|..++..|+|.|.|...
T Consensus 9 kPsL~a~P-~~vV~~G~~VTL~C-~~-~~~~~~~~~f~L~k~g~~~~~--~~~~~~~~~a~f~i~~vt~~daG~Y~C~y~ 83 (118)
T 4ety_A 9 DITIFPNS-SLMISQGTFVTVVC-SY-SDKHDLYNMVRLEKDGSTFME--KSTEPYKTEDEFEIGPVNETITGHYSCIYS 83 (118)
T ss_dssp EEEEECCS-EEEEETTCCEEEEE-EC-TTTGGGCCEEEEEETTEEEEE--EECCSSSSEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEEeC-CCcccCCCcEEEEE-CC-CCCCcccCEEEEEECCcCccc--cccCCCCcceEEEeCccCccCCeEEEEEee
Confidence 34444333 36788999999999 64 333 57899999875431 000012234479999999999999999988
Q ss_pred eCCcce--EEEEEEEEeeC
Q psy12421 133 NKHGTD--ETNCVVIVESE 149 (168)
Q Consensus 133 n~~g~~--~~~~~l~v~~~ 149 (168)
+..+.. +..+.|.|.+.
T Consensus 84 ~~~~wS~~Sdpl~L~Vtg~ 102 (118)
T 4ety_A 84 KGITWSERSKTLELKVIKE 102 (118)
T ss_dssp C----CEECCCEEEEEECC
T ss_pred CCCccccccCCEEEEEEEe
Confidence 776543 23445555543
No 498
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.64 E-value=5.4e-08 Score=66.33 Aligned_cols=81 Identities=15% Similarity=0.247 Sum_probs=50.1
Q ss_pred CeEEeecCCeEE--ecCCcEEEEEEEeccCC----CeeEEEeCCEECCCCC--eEEEecCCEE----EEEEccCCCCCCe
Q psy12421 58 PNFTFLLRPRVM--QVRQTCKLLCCLSGKPP----PTVKWYKGNRELSKRD--YSMSYSDGVV----SMEIIDCKPEDSG 125 (168)
Q Consensus 58 p~~~~~~~~~~~--~~g~~~~l~C~~~g~p~----p~i~W~~~~~~~~~~~--~~~~~~~~~~----~l~i~~~~~~d~G 125 (168)
|.+...+....+ .+|+++.|.|.+.|.++ +.+.|++++..+.... ......++.. .|.|......|.|
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 444444444333 68999999999998753 4999999997664321 1111223311 1222222334499
Q ss_pred EEEEEEEeCCcce
Q psy12421 126 EYKCVATNKHGTD 138 (168)
Q Consensus 126 ~Y~C~a~n~~g~~ 138 (168)
.|+|.|.|..+..
T Consensus 82 ~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 82 EYKCKVSNKALPA 94 (207)
T ss_dssp CEEEEEECTTSSS
T ss_pred eEEEEEEcCcCCc
Confidence 9999999998764
No 499
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.63 E-value=5e-07 Score=56.69 Aligned_cols=74 Identities=18% Similarity=0.256 Sum_probs=52.3
Q ss_pred eecCCeEEecCCcEEEEEEEecc--CCCeeEEEeCCE------ECC---------CCCeEE--EecCCEEEEEEccCCCC
Q psy12421 62 FLLRPRVMQVRQTCKLLCCLSGK--PPPTVKWYKGNR------ELS---------KRDYSM--SYSDGVVSMEIIDCKPE 122 (168)
Q Consensus 62 ~~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~~~~~------~~~---------~~~~~~--~~~~~~~~l~i~~~~~~ 122 (168)
..+....+.+|++++|.|..... ....+.|++... .+. ..++.+ ....+..+|.|.+++.+
T Consensus 15 ~~~~~v~~~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~ 94 (122)
T 1hkf_A 15 SKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREE 94 (122)
T ss_dssp CCCEEEEECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGG
T ss_pred cCCceEEEecCCCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCCHH
Confidence 34445678899999999998653 236799998531 110 133443 22455678999999999
Q ss_pred CCeEEEEEEEeCC
Q psy12421 123 DSGEYKCVATNKH 135 (168)
Q Consensus 123 d~G~Y~C~a~n~~ 135 (168)
|+|.|.|.+....
T Consensus 95 Dsg~Y~C~v~~~~ 107 (122)
T 1hkf_A 95 DSGHYWCRIYRPS 107 (122)
T ss_dssp GCEEEEEEEECTT
T ss_pred HCEEEEEEEEcCC
Confidence 9999999988764
No 500
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=98.63 E-value=9.5e-07 Score=55.58 Aligned_cols=76 Identities=18% Similarity=0.273 Sum_probs=54.6
Q ss_pred eEEeecCCeEEecCCcEEEEEEEeccCCCeeEEEeCC--E---EC-------------CCCCeEEEe-cCCEEEEEEccC
Q psy12421 59 NFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--R---EL-------------SKRDYSMSY-SDGVVSMEIIDC 119 (168)
Q Consensus 59 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~---~~-------------~~~~~~~~~-~~~~~~l~i~~~ 119 (168)
.+...+....+.+|++++|.|.........+.||+.. . .+ ...++.... ..+..+|.|.++
T Consensus 7 ~V~Q~p~~~~v~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~Rf~~~~~~~~~~sL~I~~~ 86 (125)
T 3r8b_B 7 AVTQSPRNKVAVTGEKVTLSCKQTNSYFNNMYWYRQDTGHELRLIFMSHGIRNVEKGDIPDGYKASRPSQENFSLILELA 86 (125)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCCCSEEEEEEECTTSCEEEEEEESSTTCCEECSSCTTCEEEEEETTEEEEEETTC
T ss_pred cEEecCCeEEEcCCCcEEEEEEECCCCCCeEEEEEECCCCCcEEEEEEcCCccccCCCCCCceEEEecCCCEEEEEECCC
Confidence 4555666778899999999999887665689999842 1 01 012233321 245678999999
Q ss_pred CCCCCeEEEEEEEeC
Q psy12421 120 KPEDSGEYKCVATNK 134 (168)
Q Consensus 120 ~~~d~G~Y~C~a~n~ 134 (168)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~Dsg~Y~C~~~~~ 101 (125)
T 3r8b_B 87 TPSQTSVYFCASGGG 101 (125)
T ss_dssp CGGGCEEEEEEEEET
T ss_pred ChhhCEEEEEEEcCC
Confidence 999999999998764
Done!