RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12421
(168 letters)
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR
{Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 76.4 bits (187), Expect = 2e-19
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 57 APNFTFLLR--PRVMQVR--QTCKLLCCLSGKPPPTVKWYKGNREL--SKRDYSMSYSDG 110
AP +T + R+ V T K C G P PT++W K +E R +
Sbjct: 1 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ 60
Query: 111 VVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146
S+ + P D G Y CV N++G+ + V
Sbjct: 61 HWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 96
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 69.5 bits (169), Expect = 8e-17
Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRD-YSMSYSDGVVSMEI 116
P + ++ ++ +L ++G P T W K +++ + + + S+ + I
Sbjct: 1 PQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTI 60
Query: 117 IDCKPEDSGEYKCVATNKHGTDETNCVVIV 146
+ + E G Y + NK G+ + + V
Sbjct: 61 LAARQEHCGCYTLLVENKLGSRQAQVNLTV 90
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 98
Score = 67.2 bits (163), Expect = 6e-16
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Query: 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK--RDYSMSYSDGVVSM 114
AP ++ + + + GKP P +WYK ++ + R Y D V +
Sbjct: 4 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCEL 63
Query: 115 EIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148
I D EDS A N G ++ ++V++
Sbjct: 64 VIRDVTGEDSASIMVKAINIAGETSSHAFLLVQA 97
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId:
9103]}
Length = 102
Score = 66.8 bits (162), Expect = 8e-16
Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 51 QETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSK--RDYSMSYS 108
+E P FT + + + C + G P P V W+K + + +
Sbjct: 2 EEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDE 61
Query: 109 DGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148
+G S+ I + +D +Y C A N G ++VE+
Sbjct: 62 EGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVET 101
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 66.3 bits (161), Expect = 9e-16
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 56 SAPNFTF-LLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSM 114
SAP + + V++ Q + C ++G P P V W + LS +++ S +
Sbjct: 1 SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSG----L 56
Query: 115 EIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146
I K D G Y C ATN+HG +V V
Sbjct: 57 VIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 88
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 91
Score = 63.7 bits (154), Expect = 1e-14
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 62 FLLRPRVMQVR--QTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVV-SMEIID 118
L +PR M V ++ + C G+P PTV W + + LS + + EI
Sbjct: 2 ILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISS 61
Query: 119 CKPEDSGEYKCVATNKHGTDETNCVVIVE 147
+ D G Y V N G E + ++
Sbjct: 62 VQASDEGNYSVVVENSEGKQEAEFTLTIQ 90
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 61.4 bits (148), Expect = 1e-13
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Query: 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEI 116
P F + Q+ C + PP V W+K +REL + Y Y+ + I
Sbjct: 2 PRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTI 61
Query: 117 IDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 151
K +D GEY A N +GT E + V E
Sbjct: 62 NRVKGDDKGEYTVRAKNSYGTKEEIVFLNVTRHSE 96
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 59.9 bits (144), Expect = 3e-13
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEII 117
P++ ++ + + C SGKP P V+W + + L+ ++ +
Sbjct: 2 PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGG---ELRFS 58
Query: 118 DCKPEDSGEYKCVATNKHGTDETNCVVIVES 148
EDSG Y+CVA NKHGT + + V++
Sbjct: 59 KLVLEDSGMYQCVAENKHGTVYASAELTVQA 89
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 58.5 bits (140), Expect = 2e-12
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 14/88 (15%)
Query: 73 QTCKLLCCLSGKPPPTVKWYKGNREL--------------SKRDYSMSYSDGVVSMEIID 118
+ +C + P ++W K + K + + + I +
Sbjct: 21 GDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLYIRN 80
Query: 119 CKPEDSGEYKCVATNKHGTDETNCVVIV 146
ED+GEY C+A N G + + V
Sbjct: 81 VTFEDAGEYTCLAGNSIGISFHSAWLTV 108
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 57.7 bits (138), Expect = 3e-12
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 58 PNFTFLLRPRVMQVR--QTCKLLCCLSGKP---PPTVKWYK----------GNRELSKRD 102
P F++RP+ +V + ++G PP VKW+K G
Sbjct: 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDS 62
Query: 103 YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147
Y + + + I D +P +G Y+C + K D +N + V
Sbjct: 63 YDRASKVYLFELHITDAQPAFTGGYRCEVSTKDKFDCSNFNLTVH 107
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 57.7 bits (138), Expect = 3e-12
Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 10/100 (10%)
Query: 58 PNFTFLLRPRVMQVRQTCKLLCCLS-GKPPPTVKWYKGNREL---------SKRDYSMSY 107
P+ + P + + L C G PP W+K + + + S +
Sbjct: 3 PSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTI 62
Query: 108 SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147
+ DSGEY C A N +GT + ++
Sbjct: 63 DPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMD 102
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 56.9 bits (136), Expect = 4e-12
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 66 PRVMQVR--QTCKLLCCLSGKPPPTVKWYKGNRELSKRDY---SMSYSDGVVSMEIIDCK 120
P + V Q KL C + G P ++W K + D +S + + + +
Sbjct: 3 PVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVE 62
Query: 121 PEDSGEYKCVATNKHGTDETNCV-VIVE 147
D+G Y C + T+ + V + VE
Sbjct: 63 RSDAGRYWCQVEDGGETEISQPVWLTVE 90
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 56.9 bits (136), Expect = 4e-12
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 4/90 (4%)
Query: 61 TFLLRPRVMQVR--QTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIID 118
F P + + + ++C + PPT+ W R++ + ++I
Sbjct: 3 MFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRG 62
Query: 119 CKPEDSGEYKCVATNKHG--TDETNCVVIV 146
K D G Y+C + + VIV
Sbjct: 63 IKKTDEGTYRCEGRILARGEINFKDIQVIV 92
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 56.8 bits (136), Expect = 5e-12
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 73 QTCKLLCCLSGKPPPTVKWYKGNRELS---KRDYSMSYSDGVVSMEIIDCKPEDSGEYKC 129
Q+ L+C G P PT+ W K + + D +SD + I + D EY C
Sbjct: 21 QSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVC 80
Query: 130 VATNKHGTDETNCVVIV 146
+A NK G + + + V
Sbjct: 81 IAENKAGEQDASIHLKV 97
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 55.0 bits (131), Expect = 4e-11
Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 54 VESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELS------KRDYSMSY 107
V AP TFL P C + + G P P ++W+ L+ + + ++
Sbjct: 1 VHFAPTITFLESPTS--DHHWC-IPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNH 57
Query: 108 SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146
++ +++ + ++G+Y +A N++G DE
Sbjct: 58 TEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHF 96
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 54.6 bits (130), Expect = 5e-11
Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 70 QVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDY--------SMSYSDGVVSMEIIDCKP 121
++ C + + G+P P+++W L++ + + + + + +
Sbjct: 14 EMHHWC-IPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTH 72
Query: 122 EDSGEYKCVATNKHGTDETNCVVIV 146
++G Y +A N G + +
Sbjct: 73 VNNGNYTLLAANPFGQASASIMAAF 97
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 54.1 bits (129), Expect = 5e-11
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 73 QTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132
Q L C G P P +KW K + + + + I + ED G Y+C A
Sbjct: 21 QMVTLECFAFGNPVPQIKWRKLDG-----SQTSKWLSSEPLLHIQNVDFEDEGTYECEAE 75
Query: 133 NKHGTDETNCVVIVES 148
N G D +I+ +
Sbjct: 76 NIKGRDTYQGRIIIHA 91
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 53.9 bits (128), Expect = 7e-11
Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNREL----SKRDYSMSYSDGVV 112
P+F + + + Q C G+ + + ++ K S +
Sbjct: 2 TPHFLRI-QNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIA 60
Query: 113 SMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146
S +++ D+G+Y+C+ + G +N +V
Sbjct: 61 SFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELV 94
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 53.5 bits (127), Expect = 2e-10
Identities = 22/113 (19%), Positives = 32/113 (28%), Gaps = 32/113 (28%)
Query: 66 PRVMQVR--QTCKLLCCLSGKPPPTVKWYKGNRELSKRD--------------------- 102
P + V +L +SG P PTV W K + +K
Sbjct: 16 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDK 75
Query: 103 ---------YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146
+ + + + ED G Y N G D+ N V V
Sbjct: 76 KLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 128
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 51.5 bits (122), Expect = 7e-10
Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 8/99 (8%)
Query: 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELS-----KRDYSMSY 107
TV P L P ++R + + G PPPT+ W + L +Y
Sbjct: 1 TVYYPPRVVSLEEP---ELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEG 57
Query: 108 SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146
+ ++G Y +A N GT
Sbjct: 58 EISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHF 96
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 50.7 bits (120), Expect = 8e-10
Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 7/93 (7%)
Query: 58 PNFTFLLRPRVMQVR--QTCKLLCC-LSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSM 114
P + R VR +C S P T+ W + + +
Sbjct: 1 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNG----IL 56
Query: 115 EIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147
I + +P D+G Y C +N D+ + V+
Sbjct: 57 TIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 89
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 51.2 bits (121), Expect = 9e-10
Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 9/102 (8%)
Query: 58 PNFTFLLRPRVMQVRQTCKLLC-CLSGKPPPTVKWYKGNRE--------LSKRDYSMSYS 108
P+ + P + L C G PP W+K + + S +
Sbjct: 3 PSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLN 62
Query: 109 DGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 150
+ D+GEY C A N +GT T+ V +E+ E
Sbjct: 63 PTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAVE 104
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 97
Score = 51.1 bits (121), Expect = 1e-09
Identities = 22/86 (25%), Positives = 30/86 (34%), Gaps = 5/86 (5%)
Query: 61 TFLLRPRVMQVR-----QTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSME 115
F +P + L C PP T +W EL S +
Sbjct: 6 VFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVI 65
Query: 116 IIDCKPEDSGEYKCVATNKHGTDETN 141
K +D+G Y+CVATN GT +
Sbjct: 66 SNPVKAKDAGSYQCVATNARGTVVSR 91
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 50.4 bits (119), Expect = 2e-09
Identities = 15/97 (15%), Positives = 32/97 (32%), Gaps = 9/97 (9%)
Query: 62 FLLRPRVMQVR--QTCKLLCCLSGKP-PPTVKWYKGNRELSKRD------YSMSYSDGVV 112
++ R + +L C + P V W K N + + +
Sbjct: 6 YIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFF 65
Query: 113 SMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 149
+ P D+G Y+C A + E++ + ++
Sbjct: 66 ILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYVTD 102
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 50.4 bits (119), Expect = 2e-09
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 15/107 (14%)
Query: 62 FLLRPRVMQVR--QTCKLLCCLSGKPP---PTVKWYKGNREL----------SKRDYSMS 106
F+ +P+ V+ + + + + PT+KW+KG K +
Sbjct: 3 FIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERH 62
Query: 107 YSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEESK 153
M+II K +G Y+C T K D + + V +
Sbjct: 63 SRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTT 109
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 49.6 bits (117), Expect = 3e-09
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 1/92 (1%)
Query: 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSM-E 115
P R ++ T L G P PT W G+ + + + +
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIF 61
Query: 116 IIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 147
K DSG YK N+ G DE VIV+
Sbjct: 62 FPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 48.1 bits (113), Expect = 8e-09
Identities = 17/94 (18%), Positives = 24/94 (25%), Gaps = 14/94 (14%)
Query: 57 APNFTFLLRPRVMQVR--QTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSM 114
P P +C G P P +K K + +
Sbjct: 2 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLK------------DGTFPLPIG 49
Query: 115 EIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148
E + + G Y C A + G V V S
Sbjct: 50 ESVTVTRDLEGTYLCRARSTQGEVTREVTVNVLS 83
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 48.5 bits (114), Expect = 1e-08
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 9/98 (9%)
Query: 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN--------RELSKRDYSMSYSD 109
P + + +T L+C PP T + S+ + +S S
Sbjct: 3 PRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQ 62
Query: 110 GVVSMEIID-CKPEDSGEYKCVATNKHGTDETNCVVIV 146
G + I + D G+Y+C T+ G+D+ + V
Sbjct: 63 GRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 100
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human
(Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 47.9 bits (113), Expect = 1e-08
Identities = 17/81 (20%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Query: 60 FTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNREL---SKRDYSMSYSDGVVSMEI 116
T L + +L C +S VKW+K E+ K Y + + I
Sbjct: 3 VTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILII 61
Query: 117 IDCKPEDSGEYKCVATNKHGT 137
D+ EY + T +
Sbjct: 62 EGATKADAAEYSVMTTGGQSS 82
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 47.7 bits (112), Expect = 1e-08
Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 1/93 (1%)
Query: 57 APNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGN-RELSKRDYSMSYSDGVVSME 115
P + + L C + G +K + + + ++++ + S+
Sbjct: 2 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLV 61
Query: 116 IIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148
+ + D G Y+C A G + + ++
Sbjct: 62 FLRPQASDEGHYQCFAETPAGVASSRVISFRKT 94
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 47.2 bits (111), Expect = 2e-08
Identities = 11/85 (12%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Query: 62 FLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNR---ELSKRDYSMSYSDGVVSMEIID 118
++ + + + + C P ++K + + + +
Sbjct: 8 YVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKT 67
Query: 119 CKPEDSGEYKCVATNKHGTDETNCV 143
PED G Y C N G + + +
Sbjct: 68 TLPEDEGVYTCEVDNGVGKPQKHSL 92
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 45.3 bits (106), Expect = 1e-07
Identities = 15/79 (18%), Positives = 22/79 (27%), Gaps = 11/79 (13%)
Query: 78 LCCLSGKPPPTVKWYK-----------GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGE 126
S P V W K R S + S+ I + D E
Sbjct: 15 FHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDE 74
Query: 127 YKCVATNKHGTDETNCVVI 145
Y+ + N T + V+
Sbjct: 75 YEMESPNITDTMKFFLYVL 93
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 44.4 bits (104), Expect = 2e-07
Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Query: 55 ESAPNFTFLLRPRVMQVR--QTCKLLCCLSGKPPPTVKWYKGNRELSKRD--YSMSYSDG 110
+ + F L P QV +L L+ VKW K +E+ Y
Sbjct: 3 KKSTAFQKKLEP-AYQVSKGHKIRLTVELAD-HDAEVKWLKNGQEIQMSGSKYIFESIGA 60
Query: 111 VVSMEIIDCKPEDSGEYKCVATNKHGT 137
++ I C D Y+CV + +
Sbjct: 61 KRTLTISQCSLADDAAYQCVVGGEKCS 87
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 44.4 bits (104), Expect = 3e-07
Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 8/88 (9%)
Query: 66 PRVMQVRQTCKLLCCL------SGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDC 119
+ + V L+C P ++WYK + L + S + +++
Sbjct: 8 KQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD--RLIVMNV 65
Query: 120 KPEDSGEYKCVATNKHGTDETNCVVIVE 147
+ G Y C A+ + + ++E
Sbjct: 66 AEKHRGNYTCHASYTYLGKQYPITRVIE 93
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 44.0 bits (102), Expect = 4e-07
Identities = 15/89 (16%), Positives = 22/89 (24%)
Query: 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEII 117
P + + V L C + G+ W E S +
Sbjct: 3 PTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLAN 62
Query: 118 DCKPEDSGEYKCVATNKHGTDETNCVVIV 146
+ C A N G E + V V
Sbjct: 63 VTSDLNRKNVTCWAENDVGRAEVSVQVNV 91
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 42.4 bits (98), Expect = 2e-06
Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 10/109 (9%)
Query: 53 TVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSD--- 109
TV P + + + + ++ C + PPP + + + S Y+
Sbjct: 3 TVNGPPIIS-STQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETI 61
Query: 110 -----GVVSMEIIDCKPE-DSGEYKCVATNKHGTDETNCVVIVESEEES 152
+ ++ I + Y C A N G+D + + E S
Sbjct: 62 STEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEMS 110
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 41.3 bits (95), Expect = 6e-06
Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 14/92 (15%)
Query: 69 MQVRQTCKLLCCLSGKPPPTVKWYKGNRELS-------------KRDYSMSYSDGVVSME 115
+ + +L+C ++G+ W + + + S + +
Sbjct: 14 VDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLN 73
Query: 116 IIDCKPEDSG-EYKCVATNKHGTDETNCVVIV 146
I + + + C A N HG D +I
Sbjct: 74 ISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 105
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 41.2 bits (95), Expect = 7e-06
Identities = 14/82 (17%), Positives = 23/82 (28%)
Query: 66 PRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSG 125
V R + L S +G V++ I + + D G
Sbjct: 35 MEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSDEG 94
Query: 126 EYKCVATNKHGTDETNCVVIVE 147
Y C + +E + VE
Sbjct: 95 GYTCFFRDHSYQEEAAVELKVE 116
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 39.1 bits (90), Expect = 3e-05
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Query: 68 VMQVRQTCKLLCCLS-GKPPPTVKWYKGNRE-LSKRDYSMSYSDGVVSMEIIDCKPEDSG 125
V + C L+ + T+ WYK + + + + + + K EDSG
Sbjct: 13 VSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSG 72
Query: 126 EYKCVATNKHGTDETNCVVIV 146
Y CV N
Sbjct: 73 HYYCVVRNSSYCLRIKISAKF 93
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 98
Score = 38.9 bits (90), Expect = 3e-05
Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 84 KPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCV 143
++ + + K ++G ++I + +DSG Y + +GT N
Sbjct: 34 GSTLVAEFKRKMKPFLKSGAFEILANG--DLKIKNLTRDDSGTYNVTVYSTNGTRILNKA 91
Query: 144 VIV 146
+ +
Sbjct: 92 LDL 94
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 38.6 bits (89), Expect = 3e-05
Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNREL-SKRDYSMSYSDGVVSMEIIDCKPE 122
L + V +T LS P +W + L + D + + + +C+
Sbjct: 8 LYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLTASPDCEIIEDGKKHILILHNCQLG 66
Query: 123 DSGEYKCVATNKHGT 137
+GE A N
Sbjct: 67 MTGEVSFQAANAKSA 81
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 38.4 bits (88), Expect = 5e-05
Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 61 TFLLRPRVMQVRQTCKLLCCLSG---KPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEII 117
L+P ++ V ++ + C + T+ ++GN L + + +
Sbjct: 6 ILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATF 65
Query: 118 DCKP---EDSGEYKCVATN 133
+ + + C+A
Sbjct: 66 NSTADREDGHRNFSCLAVL 84
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 38.3 bits (88), Expect = 6e-05
Identities = 12/94 (12%), Positives = 24/94 (25%), Gaps = 5/94 (5%)
Query: 58 PNFTFLLRPRVMQVRQTCKLLCCLSGKPP---PTVKWYKGNRELSKRDYSMSYSDGVVSM 114
P V + L C + G P TV +G +E + V+
Sbjct: 5 ERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKE--LKREPAVGEPAEVTT 62
Query: 115 EIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148
++ + ++ C +
Sbjct: 63 TVLVRRDHHGAQFSCRTELDLRPQGLELFENTSA 96
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 36.8 bits (84), Expect = 1e-04
Identities = 14/80 (17%), Positives = 22/80 (27%), Gaps = 6/80 (7%)
Query: 66 PRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSG 125
Q +T L C P + + S +S + I SG
Sbjct: 9 HLEFQEGETIVLRCHSWKDKPLVKVTFF------QNGKSKKFSRSDPNFSIPQANHSHSG 62
Query: 126 EYKCVATNKHGTDETNCVVI 145
+Y C + + V I
Sbjct: 63 DYHCTGNIGYTLYSSKPVTI 82
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3,
second domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 36.5 bits (83), Expect = 2e-04
Identities = 14/89 (15%), Positives = 26/89 (29%), Gaps = 9/89 (10%)
Query: 58 PNFTFLLRPRVMQVRQTCKLLCCLS-GKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEI 116
P FT + + +L C P T+ W++G ++ +
Sbjct: 2 PFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIG--------GPAPSPSVL 53
Query: 117 IDCKPEDSGEYKCVATNKHGTDETNCVVI 145
S + C A N G + +
Sbjct: 54 NVTGVTQSTMFSCEAHNLKGLASSRTATV 82
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 36.3 bits (82), Expect = 2e-04
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 2/81 (2%)
Query: 68 VMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEY 127
+ Q+ + L C +G P W + + ++M + Y
Sbjct: 12 LAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMN--PVSFGNEHSY 69
Query: 128 KCVATNKHGTDETNCVVIVES 148
C AT + E V + S
Sbjct: 70 LCTATCESRKLEKGIQVEIYS 90
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 36.2 bits (82), Expect = 3e-04
Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 9/84 (10%)
Query: 73 QTCKLLCCLSGKPPPTVKWYKGN---------RELSKRDYSMSYSDGVVSMEIIDCKPED 123
++ KL C SG P V+W Y+ + + +D
Sbjct: 17 ESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKD 76
Query: 124 SGEYKCVATNKHGTDETNCVVIVE 147
+GEY C+ + + G + + +
Sbjct: 77 NGEYTCMVSEEGGQNYGEVSIHLT 100
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 35.8 bits (81), Expect = 4e-04
Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 2/83 (2%)
Query: 64 LRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPED 123
R + T +L C + + K + G ++ I + D
Sbjct: 4 YRQHFFKHGGTAELKCSQKSNLARVFWKF--QNGVLKAESPKYGLMGRKNLLIFNLSEGD 61
Query: 124 SGEYKCVATNKHGTDETNCVVIV 146
SG Y+C++ + VV
Sbjct: 62 SGVYQCLSEERVKNKTVFQVVAK 84
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 35.3 bits (80), Expect = 6e-04
Identities = 13/85 (15%), Positives = 20/85 (23%), Gaps = 8/85 (9%)
Query: 66 PRVMQVRQTCKLLCCLSGKPP-PTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDS 124
V + L C V + + Y I +DS
Sbjct: 11 RWVFKEEDPIHLRCHSWKNTALHKVTYL-------QNGKDRKYFHHNSDFHIPKATLKDS 63
Query: 125 GEYKCVATNKHGTDETNCVVIVESE 149
G Y C + V I ++
Sbjct: 64 GSYFCRGLVGSKNVSSETVNITITQ 88
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 35.1 bits (79), Expect = 9e-04
Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 11/92 (11%)
Query: 66 PRVMQVR--QTCKLLCCLSGKPPPTVKWYKGN---------RELSKRDYSMSYSDGVVSM 114
+++ KL C SG P V+W Y + +
Sbjct: 11 EPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGI 70
Query: 115 EIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146
ED+G Y C+ + + G V +
Sbjct: 71 TFKSVTREDTGTYTCMVSEEGGNSYGEVKVKL 102
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 35.0 bits (79), Expect = 0.001
Identities = 9/44 (20%), Positives = 16/44 (36%)
Query: 103 YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 146
S G S+ + + + D G Y+C G ++V
Sbjct: 79 TSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 122
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 34.5 bits (78), Expect = 0.001
Identities = 8/49 (16%), Positives = 12/49 (24%), Gaps = 2/49 (4%)
Query: 85 PPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 133
TV W + + + + DSG Y C
Sbjct: 35 DNATVHWVLRKPAAGSHPSRWAGMGRR--LLLRSVQLHDSGNYSCYRAG 81
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32) {Human
(Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 32.3 bits (72), Expect = 0.007
Identities = 17/92 (18%), Positives = 26/92 (28%), Gaps = 10/92 (10%)
Query: 56 SAPNFTFLLRPRVMQVR--QTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVS 113
+ P L P+ + V + L C + P + N L
Sbjct: 1 APPKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQP-------- 52
Query: 114 MEIIDCKPEDSGEYKCVATNKHGTDETNCVVI 145
DSGEY C +D + V+
Sbjct: 53 SYRFKANNNDSGEYTCQTGQTSLSDPVHLTVL 84
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 31.9 bits (71), Expect = 0.010
Identities = 15/90 (16%), Positives = 24/90 (26%), Gaps = 3/90 (3%)
Query: 58 PNFTFLLRPRV-MQVRQTCKLLCCLS-GKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSM 114
F+ R V + C P + +W D S ++
Sbjct: 4 QEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNL 63
Query: 115 EIIDCKPEDSGEYKCVATNKHGTDETNCVV 144
I + D G Y C AT+ +
Sbjct: 64 YIAKTEASDLGNYSCFATSHIDFITKSVFS 93
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 32.0 bits (71), Expect = 0.012
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 9/83 (10%)
Query: 73 QTCKLLC-CLSGKPPPTVKWYKGNREL-----SKRDYSMSYSDGVVSMEIIDCKPEDSGE 126
+ +L C + P P + W K + ++ ED +
Sbjct: 18 RPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSD 77
Query: 127 ---YKCVATNKHGTDETNCVVIV 146
Y C A N +E V
Sbjct: 78 IYKYVCTAKNAAVDEEVVLVEYE 100
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 31.1 bits (69), Expect = 0.015
Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 8/81 (9%)
Query: 66 PRVMQVRQTCKLLCCLSGKPPP-TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDS 124
V+ Q L C V +YK ++ Y ++ I + EDS
Sbjct: 9 AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGE-------ALKYWYENHNISITNATVEDS 61
Query: 125 GEYKCVATNKHGTDETNCVVI 145
G Y C E+ + I
Sbjct: 62 GTYYCTGKVWQLDYESEPLNI 82
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 30.8 bits (68), Expect = 0.019
Identities = 11/74 (14%), Positives = 22/74 (29%), Gaps = 9/74 (12%)
Query: 73 QTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132
Q+ L P+V+ G ++ + + +DSG + C
Sbjct: 15 QSLTLTLESPPGSSPSVQCR---------SPRGKNIQGGKTLSVSQLELQDSGTWTCTVL 65
Query: 133 NKHGTDETNCVVIV 146
E ++V
Sbjct: 66 QNQKKVEFKIDIVV 79
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32) {Human
(Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 30.6 bits (68), Expect = 0.021
Identities = 20/92 (21%), Positives = 26/92 (28%), Gaps = 10/92 (10%)
Query: 55 ESAPNFTFLLRPRVMQVR--QTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVV 112
E P L P+ V + L C + P + N L S
Sbjct: 1 EDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASS------- 53
Query: 113 SMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 144
I DSGEY+C +D V
Sbjct: 54 -YFIDAATVNDSGEYRCQTNLSTLSDPVQLEV 84
>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion molecule-1
(MADCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 30.8 bits (68), Expect = 0.021
Identities = 9/69 (13%), Positives = 20/69 (28%), Gaps = 4/69 (5%)
Query: 78 LCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT 137
+V+W + L S + + + +G CV + T
Sbjct: 25 CRLACADRGASVQWRGLDTSLGAVQSDTGRSV----LTVRNASLSAAGTRVCVGSCGGRT 80
Query: 138 DETNCVVIV 146
+ ++V
Sbjct: 81 FQHTVQLLV 89
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 31.4 bits (70), Expect = 0.023
Identities = 13/94 (13%), Positives = 20/94 (21%), Gaps = 5/94 (5%)
Query: 45 LQITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYS 104
L +FW S V +K +
Sbjct: 19 LHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVG---- 74
Query: 105 MSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD 138
S S+ I + D+G + C N
Sbjct: 75 -DPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIV 107
>d3b5ha2 b.1.1.4 (A:23-102) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 80
Score = 29.8 bits (67), Expect = 0.034
Identities = 13/59 (22%), Positives = 19/59 (32%), Gaps = 14/59 (23%)
Query: 77 LLCCLSGKPPPTV--KWYKGNREL---SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCV 130
L C L+ +W KG L + + +D + GEY CV
Sbjct: 17 LTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFK--------VD-SDDQWGEYSCV 66
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 30.0 bits (66), Expect = 0.043
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 61 TFLLRPRVMQVR--QTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIID 118
L P ++ + L C + + + N LS+ S + I++
Sbjct: 3 KVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNSS--------LNIVN 54
Query: 119 CKPEDSGEYKCVATNKHGTDETNCVVI 145
K EDSGEYKC + ++ V
Sbjct: 55 AKFEDSGEYKCQHQQVNESEPVYLEVF 81
>d1fp5a2 b.1.1.2 (A:439-543) Immunoglobulin heavy chain epsilon
constant domain 4, CH4-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 29.7 bits (66), Expect = 0.061
Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 10/89 (11%)
Query: 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP--TVKWYKGNRELSKRDYSMSYS----D 109
+AP P R L C + P +V+W +L +S +
Sbjct: 3 AAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKG 62
Query: 110 G---VVSMEIIDCKPEDSGE-YKCVATNK 134
V S + + + + C A ++
Sbjct: 63 SGFFVFSRLEVTRAEWEQKDEFICRAVHE 91
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 29.7 bits (65), Expect = 0.064
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 66 PRVMQVR--QTCKLLCCLS-GKPPPTVKWYKGNRELS----KRDYSMSYSDGVVSMEIID 118
P ++ ++ LC ++ + W+ N E +R + D ++ I +
Sbjct: 7 PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYN 66
Query: 119 CKPEDSGEYKCVATNKHGTDETNCVVI 145
+D+G YKCV T + GT V +
Sbjct: 67 ANIDDAGIYKCVVTAEDGTQSEATVNV 93
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 29.4 bits (65), Expect = 0.087
Identities = 16/88 (18%), Positives = 26/88 (29%), Gaps = 18/88 (20%)
Query: 70 QVRQTCKLLCCLSGKPPPTVKWYK---------GNRELSKRDYSMSY---------SDGV 111
+ T +L C S K W L+K ++ G
Sbjct: 7 KKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGN 66
Query: 112 VSMEIIDCKPEDSGEYKCVATNKHGTDE 139
+ I + K EDS Y C ++ +
Sbjct: 67 FPLIIKNLKIEDSDTYICEVEDQKEEVQ 94
>d1q0xl2 b.1.1.2 (L:108-212) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens) [TaxId:
9606]}
Length = 102
Score = 29.2 bits (65), Expect = 0.095
Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 9/88 (10%)
Query: 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP--TVKWYKGNRELSKRDYSMS---YSDG 110
S+P T L+C ++ P TV W ++ + S+
Sbjct: 4 SSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNN 63
Query: 111 ---VVSMEIIDCKPEDSGE-YKCVATNK 134
S + + + Y C T++
Sbjct: 64 KYMASSYLTLTARAWERHSSYSCQVTHE 91
>d1hnfa1 b.1.1.1 (A:4-104) CD2, first domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 28.3 bits (63), Expect = 0.18
Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 88 TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT 137
++ K ++D + +G +++I K +D YK + G
Sbjct: 41 IAQFRKEKETFKEKDTYKLFKNG--TLKIKHLKTDDQDIYKVSIYDTKGK 88
>d1pfca_ b.1.1.2 (A:) Immunoglobulin heavy chain gamma constant
domain 3, CH3-gamma {Guinea pig (Cavia porcellus)
[TaxId: 10141]}
Length = 111
Score = 28.4 bits (63), Expect = 0.19
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 56 SAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP--TVKWYKGNRELSKRDYSMSYSDG--- 110
P L PR ++ L C ++G P V+W K + +DG
Sbjct: 11 RIPEVYLLPPPRNELSKKKVSLTCMITGFYPADINVEWDSSEPSDYKNTPPVFDTDGSFF 70
Query: 111 VVSMEIIDCKPEDSGE-YKCVAT 132
+ S +D ++GE + C
Sbjct: 71 LYSRLKVDTDAWNNGESFTCSVM 93
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 28.1 bits (61), Expect = 0.20
Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 73 QTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 132
+ L C + + + M+ S + I K ED+GEY+C +
Sbjct: 19 DSVTLTCLSNDIGANIQWLFNSQSL--QLTERMTLSQNNSILRIDPIKREDAGEYQCEIS 76
Query: 133 NKHGTDETNCVVI 145
N +N + +
Sbjct: 77 NPVSVRRSNSIKL 89
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 28.0 bits (61), Expect = 0.31
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 101 RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD 138
++ ++ +S+ I+ +P D G Y+CV
Sbjct: 54 KNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEKDA 91
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding
Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 121
Score = 27.8 bits (61), Expect = 0.34
Identities = 10/75 (13%), Positives = 20/75 (26%), Gaps = 4/75 (5%)
Query: 55 ESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSM 114
+S + + + P V+ +R D ++
Sbjct: 30 DSQTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQ----TKNCTL 85
Query: 115 EIIDCKPEDSGEYKC 129
I D + D+G Y
Sbjct: 86 SIRDARMSDAGRYFF 100
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 27.4 bits (60), Expect = 0.44
Identities = 17/107 (15%), Positives = 29/107 (27%), Gaps = 27/107 (25%)
Query: 51 QETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYS-- 108
+ T+E+ P P+V + LL WYKGN + +
Sbjct: 1 EVTIEAVP-------PQVAE-DNNVLLLVHNLPLALGAFAWYKGNT-TAIDKEIARFVPN 51
Query: 109 ----------------DGVVSMEIIDCKPEDSGEYKCVATNKHGTDE 139
S+ +D G Y T+++
Sbjct: 52 SNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRT 98
>d1hxma2 b.1.1.2 (A:121-206) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 86
Score = 26.9 bits (59), Expect = 0.53
Identities = 8/80 (10%), Positives = 23/80 (28%), Gaps = 5/80 (6%)
Query: 65 RPRVMQVRQTCKLLCCLSGKPPP--TVKWYKGNRELSKRDYSMSYSDGVVSME-IIDCKP 121
+P V ++ + C + P + + + G + + +
Sbjct: 6 KPSVFVMKNGTNVACLVKEFYPKDIRINLVSSKKITEFDPAIVISPSGKYNAVKLGKYED 65
Query: 122 EDSGEYKCVATNKHGTDETN 141
+S C + + T +
Sbjct: 66 SNS--VTCSVQHDNKTVHST 83
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 26.7 bits (58), Expect = 0.79
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 104 SMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET 140
S+ ++ + + + +D G Y+C+ +K T
Sbjct: 61 RTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGMI 97
>d1kzyc1 c.15.1.4 (C:1714-1866) 53BP1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 153
Score = 26.9 bits (59), Expect = 0.93
Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Query: 47 ITFWQETVESAPNFTFLLRPRVMQVRQTCKLLCCLSGKPPP-TVKW----YKGNRELSKR 101
+ + E + L+ + +T K CL+ P + W N+ + R
Sbjct: 75 LEDFNEAQCNTAYQCLLIADQH---CRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYR 131
Query: 102 DYSMSYSDGVVSMEIIDCKPED 123
+Y + + I+D +P +
Sbjct: 132 NYLLPAGYSLEEQRILDWQPRE 153
>d1qfoa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 118
Score = 26.4 bits (57), Expect = 1.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 104 SMSYSDGVVSMEIIDCKPEDSGEYKC 129
+ V ++ + D KPEDSG Y
Sbjct: 71 MGNMDHKVCNLLLKDLKPEDSGTYNF 96
>d1vl6a2 c.58.1.3 (A:1-154) Malate oxidoreductase (malic enzyme)
{Thermotoga maritima [TaxId: 2336]}
Length = 154
Score = 26.3 bits (58), Expect = 1.3
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 12/52 (23%)
Query: 99 SKRDYSMSYSDGV--VSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 148
+ S+ Y+ GV V+ + PE + Y T++ N V +V
Sbjct: 24 DRETLSLLYTPGVADVARACAED-PEKTYVY----TSRW-----NTVAVVSD 65
>d1xiwa_ b.1.1.4 (A:) CD3 epsilon chain ectodomain fragment {Human
(Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 25.0 bits (54), Expect = 2.9
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Query: 74 TCKLLCCLSGKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKP-EDSGEYKCVAT 132
T L C P + W ++ + + + + + + E SG Y C
Sbjct: 12 TVILTCPQY--PGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPR 69
Query: 133 N 133
Sbjct: 70 G 70
>d2bnub1 b.1.1.1 (B:2-113) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 24.7 bits (53), Expect = 4.3
Identities = 5/32 (15%), Positives = 12/32 (37%)
Query: 108 SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE 139
+ + ++ P + Y C ++ T E
Sbjct: 68 TTEDFPLRLLSAAPSQTSVYFCASSYVGNTGE 99
>d1xv2a_ d.290.1.1 (A:) Hypothetical protein SA2394 {Staphylococcus
aureus [TaxId: 1280]}
Length = 232
Score = 25.1 bits (55), Expect = 5.0
Identities = 7/38 (18%), Positives = 13/38 (34%), Gaps = 4/38 (10%)
Query: 18 PRLRTRAIPKTIPAYVPEVQQVRRREPLQITFWQETVE 55
+ R +P P Y + RR Q ++ +
Sbjct: 117 KHMHVRMMPAQQPPYTRLIDSARR----QPEEKRQDIR 150
>d2hepa1 a.2.21.1 (A:1-42) Hypothetical protein YnzC {Bacillus
subtilis [TaxId: 1423]}
Length = 42
Score = 22.8 bits (49), Expect = 6.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 148 SEEESKEQQELAHNFL 163
+EEE EQQ+L +L
Sbjct: 23 TEEEKAEQQKLRQEYL 38
>d8faba1 b.1.1.1 (A:3-105) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 5 [TaxId: 9606]}
Length = 103
Score = 23.9 bits (51), Expect = 7.4
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 15/77 (19%)
Query: 70 QVRQTCKLLCCLSGKPPPTVKWYK---------------GNRELSKRDYSMSYSDGVVSM 114
QT ++ C + P WY+ + +S S S V++
Sbjct: 11 SPGQTARITCSANALPNQYAYWYQQKPGRAPVMVIYKDTQRPSGIPQRFSSSTSGTTVTL 70
Query: 115 EIIDCKPEDSGEYKCVA 131
I + ED +Y C A
Sbjct: 71 TISGVQAEDEADYYCQA 87
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.133 0.402
Gapped
Lambda K H
0.267 0.0524 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 626,102
Number of extensions: 27972
Number of successful extensions: 215
Number of sequences better than 10.0: 1
Number of HSP's gapped: 181
Number of HSP's successfully gapped: 90
Length of query: 168
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 89
Effective length of database: 1,322,926
Effective search space: 117740414
Effective search space used: 117740414
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.5 bits)