Query psy12422
Match_columns 356
No_of_seqs 183 out of 1767
Neff 11.5
Searched_HMMs 29240
Date Fri Aug 16 18:55:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12422.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12422hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 2.2E-43 7.6E-48 321.6 30.5 327 1-342 20-394 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 7E-43 2.4E-47 318.2 30.5 311 1-330 212-569 (570)
3 3qs7_E FL cytokine receptor; i 100.0 8.2E-40 2.8E-44 286.1 28.0 305 1-337 63-420 (423)
4 3kld_A Contactin 4, axcam, BIG 100.0 7E-40 2.4E-44 284.4 17.8 309 1-331 23-383 (384)
5 3laf_A Deleted in colorectal c 100.0 1.6E-38 5.5E-43 277.9 21.9 309 1-333 36-403 (403)
6 3p3y_A Neurofascin; IG domains 100.0 2.6E-38 8.9E-43 276.7 22.7 310 1-331 32-403 (404)
7 3qs9_E FL cytokine receptor; i 100.0 1.6E-37 5.4E-42 278.6 26.9 306 1-338 63-421 (527)
8 1bih_A Hemolin; insect immunit 100.0 1.2E-37 4E-42 271.7 24.5 314 1-330 21-395 (395)
9 1cs6_A Axonin-1; neural cell a 100.0 3.3E-38 1.1E-42 273.9 18.8 307 1-331 22-382 (382)
10 1e07_A Carcinoembryonic antige 100.0 2.8E-36 9.6E-41 279.1 29.4 311 1-355 218-581 (642)
11 2rik_A Titin; I-SET IG fold, p 100.0 2.9E-35 1E-39 244.9 32.1 220 1-331 20-284 (284)
12 2v5m_A Dscam; neurobiology SPL 100.0 1.7E-36 5.7E-41 263.8 21.6 305 1-329 19-387 (388)
13 2ec8_A MAST/stem cell growth f 100.0 9.3E-36 3.2E-40 269.1 25.7 303 1-339 51-419 (524)
14 3dmk_A DOWN syndrome cell adhe 100.0 2.5E-35 8.6E-40 279.9 29.3 325 1-355 263-641 (816)
15 3dmk_A DOWN syndrome cell adhe 100.0 2.3E-35 8E-40 280.0 28.8 307 1-334 444-812 (816)
16 1e07_A Carcinoembryonic antige 100.0 7.4E-35 2.5E-39 269.6 30.6 300 1-332 304-641 (642)
17 3qs9_E FL cytokine receptor; i 100.0 8.5E-36 2.9E-40 267.4 23.3 305 1-335 154-514 (527)
18 2ocw_A Polymeric-immunoglobuli 100.0 5.6E-34 1.9E-38 260.9 33.3 320 1-334 127-549 (585)
19 2rcj_C Light chain; immunoglob 100.0 8.5E-35 2.9E-39 262.7 24.9 320 1-342 15-435 (523)
20 2ec8_A MAST/stem cell growth f 100.0 1.5E-36 5.2E-41 274.2 13.5 324 1-342 129-521 (524)
21 1wio_A CD4, T-cell surface gly 100.0 4.3E-36 1.5E-40 258.8 12.6 288 1-330 9-362 (363)
22 2yd9_A Receptor-type tyrosine- 100.0 8.1E-34 2.8E-38 238.6 24.3 229 1-336 21-296 (304)
23 2ocw_A Polymeric-immunoglobuli 100.0 3.1E-32 1.1E-36 249.4 33.0 335 1-355 15-464 (585)
24 1z7z_I Intercellular adhesion 100.0 2.4E-34 8.3E-39 255.0 16.0 292 1-332 101-450 (450)
25 1z7z_I Intercellular adhesion 100.0 4.3E-32 1.5E-36 240.6 23.4 310 1-342 14-378 (450)
26 1qz1_A Neural cell adhesion mo 100.0 6E-32 2E-36 225.7 23.0 220 1-332 17-291 (291)
27 2jll_A NCAM2, neural cell adhe 100.0 1.1E-30 3.6E-35 227.3 28.4 222 1-333 15-290 (389)
28 3v2a_R Vascular endothelial gr 100.0 3.6E-35 1.2E-39 277.3 0.0 306 1-336 345-761 (772)
29 2y25_A Myomesin; structural pr 100.0 2.6E-32 8.9E-37 230.8 17.3 256 1-279 21-313 (317)
30 2nzi_A Titin; IG-domain, FNIII 100.0 4.3E-31 1.5E-35 222.0 24.4 218 1-324 19-283 (305)
31 1qgc_4 Protein (immunoglobulin 100.0 2.8E-32 9.4E-37 241.0 14.7 302 1-328 16-436 (438)
32 1ry7_B FGFR-3, fibroblast grow 100.0 1.4E-32 4.7E-37 234.2 12.2 243 1-336 23-332 (334)
33 2wim_A N-CAM 2, NCAM2, neural 100.0 6.3E-31 2.2E-35 219.5 21.6 259 1-281 19-284 (291)
34 3mjg_X Beta-type platelet-deri 100.0 2.5E-31 8.5E-36 221.8 17.7 250 1-280 15-277 (289)
35 2y23_A Myomesin; structural pr 100.0 2.7E-30 9.1E-35 217.9 21.6 254 1-278 16-309 (312)
36 2rcj_C Light chain; immunoglob 100.0 4.3E-30 1.5E-34 232.0 23.9 256 1-274 129-413 (523)
37 2o26_X MAST/stem cell growth f 100.0 2.1E-30 7.2E-35 216.3 19.2 246 1-281 27-288 (290)
38 3v2a_R Vascular endothelial gr 100.0 4.2E-32 1.4E-36 256.4 9.4 315 1-340 239-674 (772)
39 3o4o_C Interleukin-1 receptor 100.0 1.4E-31 4.7E-36 228.5 11.6 264 1-278 33-332 (339)
40 3laf_A Deleted in colorectal c 100.0 3.5E-31 1.2E-35 231.4 14.3 252 1-282 136-402 (403)
41 3kld_A Contactin 4, axcam, BIG 100.0 2.4E-30 8.2E-35 224.4 18.6 249 1-280 117-382 (384)
42 2a38_A Titin; Z1Z2, structural 100.0 1.3E-29 4.4E-34 198.6 20.3 170 1-278 20-192 (194)
43 1itb_B Type 1 interleukin-1 re 100.0 9.7E-31 3.3E-35 220.9 13.5 261 1-279 20-312 (315)
44 4fom_A Poliovirus receptor-rel 100.0 1.3E-30 4.5E-35 219.4 12.9 255 1-283 14-302 (308)
45 4dep_C Interleukin-1 receptor 100.0 2.8E-30 9.4E-35 221.3 12.9 261 1-279 22-331 (349)
46 3oq3_B IFN-alpha/beta binding 100.0 3E-29 1E-33 212.9 19.1 258 1-278 44-327 (329)
47 2j8h_A Titin, connectin; cardi 100.0 1.7E-28 6E-33 192.6 21.4 172 1-278 19-194 (197)
48 4fa8_A Secreted protein BARF1; 100.0 9.1E-30 3.1E-34 199.6 14.0 163 1-274 8-195 (203)
49 2oz4_A Intercellular adhesion 100.0 2.8E-29 9.5E-34 206.6 17.1 236 1-280 18-263 (265)
50 2wng_A Tyrosine-protein phosph 100.0 2.7E-29 9.2E-34 213.2 17.1 253 1-276 18-314 (327)
51 3p3y_A Neurofascin; IG domains 100.0 2.2E-29 7.7E-34 220.0 16.8 250 1-279 131-401 (404)
52 2v5m_A Dscam; neurobiology SPL 100.0 3.5E-29 1.2E-33 217.6 17.2 250 1-278 118-386 (388)
53 3rbs_A Myomesin-1; immunoglobu 100.0 1.4E-28 4.7E-33 193.9 18.9 183 1-278 17-204 (207)
54 3ejj_X Macrophage colony-stimu 100.0 1.1E-28 3.8E-33 205.7 19.5 257 1-281 19-281 (289)
55 4fqp_A Poliovirus receptor; im 100.0 1.6E-28 5.6E-33 207.0 20.5 250 1-281 15-304 (313)
56 2yd6_A PTPRD protein; hydrolas 100.0 8.3E-28 2.8E-32 191.0 23.1 169 1-273 21-195 (212)
57 3rjd_A High affinity immunoglo 100.0 1.4E-28 4.9E-33 202.0 19.2 199 1-330 16-261 (262)
58 2wv3_A Neuroplastin; igcam, me 100.0 1.4E-27 4.9E-32 186.3 23.3 162 1-278 18-187 (190)
59 1cs6_A Axonin-1; neural cell a 100.0 2.1E-29 7E-34 218.6 13.6 247 1-279 116-380 (382)
60 1igt_B IGG2A intact antibody - 100.0 1.3E-28 4.5E-33 217.7 18.9 250 1-271 15-331 (444)
61 2rik_A Titin; I-SET IG fold, p 100.0 2.2E-27 7.4E-32 197.4 24.3 167 1-278 114-281 (284)
62 2r15_A Myomesin-1; sarcomeric 100.0 1E-27 3.5E-32 190.5 20.5 190 1-280 17-209 (212)
63 3u83_A Poliovirus receptor-rel 100.0 1.1E-28 3.9E-33 209.7 15.8 250 1-281 29-320 (331)
64 3qs7_E FL cytokine receptor; i 100.0 4.3E-29 1.5E-33 218.3 13.4 246 1-280 154-413 (423)
65 3lcy_A Titin; A-BAND, IG tande 100.0 1.9E-27 6.7E-32 186.6 21.1 171 1-279 22-194 (197)
66 2yd1_A Tyrosine-protein phosph 100.0 4.4E-27 1.5E-31 186.8 22.1 171 1-278 21-197 (212)
67 1bih_A Hemolin; insect immunit 100.0 2E-28 6.8E-33 213.3 15.1 247 1-278 115-393 (395)
68 4dkd_C Macrophage colony-stimu 100.0 1.3E-27 4.6E-32 199.4 14.6 251 1-280 19-280 (292)
69 2c5d_C AXL oncogene, tyrosine- 99.9 3.5E-26 1.2E-30 179.1 21.2 161 1-279 17-191 (195)
70 1iga_A IGA1; immunoglobulin; N 99.9 6.1E-26 2.1E-30 202.3 25.0 268 1-277 16-341 (475)
71 2va4_A NCAM2, N-CAM 2, neural 99.9 7.1E-26 2.4E-30 176.9 22.5 165 1-278 19-190 (192)
72 3vh8_G Killer cell immunoglobu 99.9 3.3E-27 1.1E-31 199.3 14.9 252 1-270 38-297 (316)
73 1hzh_H IGG, immunoglobulin hea 99.9 7.9E-27 2.7E-31 207.0 16.8 259 1-271 15-340 (457)
74 2v44_A NCAM2, neural cell adhe 99.9 3.9E-26 1.3E-30 178.0 18.6 162 1-277 17-183 (189)
75 3grw_A Fibroblast growth facto 99.9 3.8E-26 1.3E-30 185.1 18.2 176 1-282 30-219 (241)
76 1epf_A NCAM, protein (neural c 99.9 6.1E-26 2.1E-30 177.1 18.4 164 1-276 17-186 (191)
77 2iep_A Muscle-specific kinase 99.9 1.2E-26 4E-31 181.4 13.9 162 1-278 22-187 (192)
78 1rhf_A Tyrosine-protein kinase 99.9 1.4E-25 4.7E-30 173.7 18.5 157 1-277 17-179 (182)
79 1igy_B IGG1 intact antibody MA 99.9 1.3E-28 4.6E-33 217.0 0.7 250 1-271 14-321 (434)
80 2v5t_A NCAM2, N-CAM 2, neural 99.9 3.7E-26 1.3E-30 178.0 14.4 163 1-278 17-185 (189)
81 3ojm_B Fibroblast growth facto 99.9 6.4E-26 2.2E-30 182.5 15.1 173 1-280 34-220 (231)
82 1wio_A CD4, T-cell surface gly 99.9 1E-26 3.4E-31 200.2 10.4 228 1-277 111-359 (363)
83 3b5h_A Cervical EMMPRIN, HAB18 99.9 1.8E-24 6.3E-29 167.6 21.7 159 1-279 13-181 (184)
84 1qgc_4 Protein (immunoglobulin 99.9 4.9E-26 1.7E-30 201.0 14.2 272 1-278 131-436 (438)
85 2vr9_A Roundabout 1, ROBO; imm 99.9 1.6E-25 5.5E-30 178.4 15.8 165 1-278 24-203 (217)
86 1zvo_C Myeloma immunoglobulin 99.9 5.7E-24 2E-28 190.8 27.1 264 1-271 15-387 (512)
87 2yd9_A Receptor-type tyrosine- 99.9 3E-25 1E-29 186.3 17.5 167 1-283 123-293 (304)
88 2d3v_A Leukocyte immunoglobuli 99.9 1.7E-25 5.8E-30 175.3 14.2 159 1-270 19-181 (196)
89 3p2t_A Leukocyte immunoglobuli 99.9 1.4E-25 4.6E-30 175.9 13.6 158 1-269 19-179 (196)
90 3bp6_B Programmed cell death 1 99.9 7.4E-25 2.5E-29 172.6 17.3 164 1-278 17-190 (202)
91 2v9r_A Roundabout homolog 1; p 99.9 2E-25 6.9E-30 177.2 14.1 170 1-283 24-204 (212)
92 2wqr_A IG epsilon chain C regi 99.9 6.9E-26 2.4E-30 191.8 11.3 249 1-270 24-309 (323)
93 1ugn_A LIR1, leukocyte immunog 99.9 2.1E-25 7.2E-30 175.1 13.0 158 1-269 19-181 (198)
94 3k0w_A Mucosa-associated lymph 99.9 1.5E-24 5.2E-29 172.8 17.1 165 1-278 33-199 (218)
95 2x1w_L Vascular endothelial gr 99.9 7.2E-25 2.5E-29 174.0 15.0 172 2-285 25-211 (213)
96 3jz7_A MCAR, CAR, coxsackievir 99.9 4.4E-25 1.5E-29 175.4 13.7 166 1-281 15-212 (214)
97 3s97_C Contactin-1; carbonic a 99.9 3.8E-25 1.3E-29 174.0 13.1 168 1-278 23-198 (201)
98 1f97_A Junction adhesion molec 99.9 3.4E-25 1.2E-29 175.8 12.8 158 1-271 16-195 (212)
99 1ry7_B FGFR-3, fibroblast grow 99.9 2.6E-25 8.9E-30 189.2 12.4 173 1-280 138-326 (334)
100 1qz1_A Neural cell adhesion mo 99.9 4.7E-25 1.6E-29 183.9 13.7 166 1-279 115-288 (291)
101 3r4d_A CEA-related cell adhesi 99.9 7E-24 2.4E-28 167.7 19.5 158 1-273 14-191 (208)
102 1za6_B IGG heavy chain; immuno 99.9 1.4E-24 4.9E-29 185.3 16.1 263 1-271 15-331 (344)
103 1uct_A Immunoglobulin alpha FC 99.9 6E-25 2E-29 174.7 12.7 154 1-268 23-180 (218)
104 1hng_A CD2; T lymphocyte adhes 99.9 6.3E-25 2.2E-29 168.6 12.2 149 1-278 11-173 (176)
105 1vca_A VCAM-D1,2, human vascul 99.9 3.8E-24 1.3E-28 168.0 15.9 169 1-283 16-199 (202)
106 2ny1_B T-cell surface glycopro 99.9 1.1E-24 3.6E-29 169.0 11.8 65 1-65 10-92 (184)
107 2fbo_J V1V2;, variable region- 99.9 2.6E-24 8.9E-29 175.3 14.2 168 1-277 17-248 (250)
108 1jbj_A CD3 epsilon and gamma e 99.9 3.6E-25 1.2E-29 171.7 8.3 163 1-271 14-179 (186)
109 1oll_A NK receptor; immune sys 99.9 5E-24 1.7E-28 165.7 14.5 153 1-268 18-172 (188)
110 2ifg_A High affinity nerve gro 99.9 1.7E-24 5.7E-29 185.0 12.6 166 1-282 173-346 (347)
111 2y25_A Myomesin; structural pr 99.9 1.7E-24 5.9E-29 182.7 12.6 218 90-332 16-316 (317)
112 2gi7_A GPVI protein; IG-like d 99.9 5.1E-24 1.7E-28 165.0 13.9 145 1-269 22-168 (184)
113 3mj8_L Stimulatory hamster ant 99.9 7.8E-24 2.7E-28 168.1 13.9 169 1-276 15-208 (213)
114 3sgj_C Human FCG3A receptor; r 99.9 1.2E-23 4.2E-28 165.4 14.7 147 1-278 22-171 (204)
115 4f80_A Butyrophilin subfamily 99.9 5.7E-23 1.9E-27 164.7 18.3 166 1-279 19-211 (226)
116 3d9a_L Light chain of hyhel10 99.9 2.9E-24 9.9E-29 170.6 10.6 169 1-277 16-209 (213)
117 1nbq_A JAM, junctional adhesio 99.9 1.1E-24 3.8E-29 172.4 7.1 161 1-274 19-200 (209)
118 2wim_A N-CAM 2, NCAM2, neural 99.9 1.2E-22 4E-27 169.3 19.1 230 88-334 12-287 (291)
119 1fnl_A Low affinity immunoglob 99.9 4.1E-23 1.4E-27 158.6 15.1 139 1-270 22-162 (175)
120 1hzh_H IGG, immunoglobulin hea 99.9 9.1E-24 3.1E-28 187.4 12.7 248 1-271 147-444 (457)
121 1lk3_L 9D7 light chain; antige 99.9 1.4E-23 4.7E-28 166.3 12.0 166 1-274 15-205 (210)
122 2y23_A Myomesin; structural pr 99.9 1.1E-22 3.7E-27 171.3 16.9 143 189-331 106-312 (312)
123 1nkr_A P58-CL42 KIR; inhibitor 99.9 8.6E-23 2.9E-27 160.5 14.6 155 1-268 22-184 (201)
124 3nl4_L Antigen binding fragmen 99.9 7.6E-23 2.6E-27 162.4 14.4 157 1-265 16-198 (213)
125 1f2q_A High affinity immunoglo 99.9 4.1E-23 1.4E-27 158.8 12.4 150 1-281 19-171 (176)
126 4frw_A Poliovirus receptor-rel 99.9 6.3E-23 2.2E-27 163.2 13.8 80 199-278 128-208 (218)
127 1f3r_B FV antibody fragment; I 99.9 1.7E-22 5.9E-27 165.1 16.5 75 194-268 144-232 (257)
128 3sbw_C Programmed cell death 1 99.9 6.1E-22 2.1E-26 158.2 19.1 168 1-280 16-210 (222)
129 1itb_B Type 1 interleukin-1 re 99.9 8.7E-23 3E-27 172.1 14.8 216 89-331 14-314 (315)
130 1dr9_A B7-1 (CD80), T lymphocy 99.9 1.6E-22 5.3E-27 159.1 15.3 165 1-278 9-198 (201)
131 4fom_A Poliovirus receptor-rel 99.9 2.3E-23 8E-28 175.1 11.1 141 194-334 119-303 (308)
132 1q0x_L FAB 9B1, light chain; a 99.9 1.2E-22 4E-27 161.2 14.2 168 1-275 15-209 (212)
133 2ghw_B Anti-SARS SCFV antibody 99.9 3.3E-22 1.1E-26 162.5 17.2 173 1-269 17-229 (247)
134 2pet_A Lutheran blood group gl 99.9 6.9E-23 2.4E-27 164.7 12.4 157 1-267 15-211 (231)
135 3ejj_X Macrophage colony-stimu 99.9 3.3E-22 1.1E-26 166.4 16.7 216 88-334 12-284 (289)
136 2if7_A SLAM family member 6; N 99.9 5.7E-22 2E-26 154.5 16.5 154 1-276 13-187 (193)
137 1igy_B IGG1 intact antibody MA 99.9 2E-23 6.7E-28 184.0 9.1 248 1-270 134-424 (434)
138 3oq3_B IFN-alpha/beta binding 99.9 4.1E-22 1.4E-26 169.0 16.7 213 91-330 40-329 (329)
139 3tv3_L PGT128 light chain, IG 99.9 8.9E-23 3.1E-27 161.8 11.8 167 1-276 15-206 (211)
140 3s96_B 3B5H10 FAB light chain; 99.9 8.9E-23 3.1E-27 162.6 11.8 169 1-276 15-215 (218)
141 3rjd_A High affinity immunoglo 99.9 7.8E-22 2.7E-26 161.7 17.3 148 1-272 97-250 (262)
142 2a38_A Titin; Z1Z2, structural 99.9 5.4E-22 1.8E-26 155.0 15.3 144 187-330 3-194 (194)
143 4fqp_A Poliovirus receptor; im 99.9 5.1E-22 1.7E-26 167.3 16.3 148 187-334 115-307 (313)
144 2yd1_A Tyrosine-protein phosph 99.9 1.5E-21 5E-26 154.9 18.0 149 187-335 4-204 (212)
145 1igt_B IGG2A intact antibody - 99.9 6.9E-23 2.4E-27 181.1 11.3 245 1-270 138-434 (444)
146 3lcy_A Titin; A-BAND, IG tande 99.9 8.7E-22 3E-26 154.2 16.4 146 187-332 5-197 (197)
147 1p6f_A NKP46, natural cytotoxi 99.9 5.5E-22 1.9E-26 159.8 15.6 153 1-268 21-175 (242)
148 1nqb_A Single-chain antibody f 99.9 1.5E-21 5E-26 159.3 18.2 158 1-269 15-220 (256)
149 4i0k_A CD276 antigen; immunogl 99.9 1.1E-22 3.7E-27 162.6 11.3 84 200-283 121-208 (222)
150 1sy6_A T-cell surface glycopro 99.9 6.4E-23 2.2E-27 161.2 9.7 64 203-270 127-192 (204)
151 2o26_X MAST/stem cell growth f 99.9 6E-22 2E-26 165.0 16.0 209 88-333 20-290 (290)
152 1nfd_E H57 FAB; complex (immun 99.9 1.5E-23 5.3E-28 166.3 6.0 166 1-273 14-204 (212)
153 3ry4_A Low affinity immunoglob 99.9 3.4E-22 1.2E-26 152.7 13.2 139 1-270 19-159 (170)
154 3vh8_G Killer cell immunoglobu 99.9 9.6E-22 3.3E-26 165.8 17.1 225 89-334 32-316 (316)
155 2va4_A NCAM2, N-CAM 2, neural 99.9 1.2E-21 4.1E-26 152.7 16.4 140 189-330 2-192 (192)
156 2yd6_A PTPRD protein; hydrolas 99.9 1.3E-21 4.4E-26 155.2 16.6 148 187-334 4-207 (212)
157 2xzc_L FAB A.17 light chain; i 99.9 3.9E-22 1.3E-26 158.7 13.5 169 1-277 15-211 (216)
158 2j8h_A Titin, connectin; cardi 99.9 2.3E-21 7.8E-26 151.9 17.7 144 188-331 3-197 (197)
159 3r06_A Anti-mouse CD3epsilon a 99.9 3.5E-22 1.2E-26 158.6 12.6 167 1-275 16-207 (213)
160 1hnf_A CD2; T lymphocyte adhes 99.9 1E-21 3.5E-26 150.8 14.7 149 1-278 14-178 (182)
161 1c1e_H Catalytic antibody 1E9 99.9 4.8E-22 1.7E-26 158.5 13.4 170 1-278 15-217 (219)
162 4dep_C Interleukin-1 receptor 99.9 3E-22 1E-26 171.3 13.0 133 196-332 127-334 (349)
163 4dkd_C Macrophage colony-stimu 99.9 3.4E-22 1.2E-26 166.6 12.7 215 89-336 13-286 (292)
164 1moe_A Anti-CEA MAB T84.66; an 99.9 1.6E-21 5.4E-26 157.8 16.1 162 1-267 16-220 (240)
165 1qok_A MFE-23 recombinant anti 99.9 3.5E-21 1.2E-25 159.5 18.0 171 1-268 41-254 (282)
166 2c1o_A IGK-C protein; FAB frag 99.9 3.2E-22 1.1E-26 163.3 11.5 168 1-276 53-250 (254)
167 3sob_L Antibody light chain; b 99.9 1.4E-21 4.7E-26 157.8 15.0 170 1-278 39-233 (237)
168 2j6e_L IGM, FAB light chain; a 99.9 2.8E-22 9.7E-27 161.5 10.5 168 1-275 34-229 (234)
169 2p1y_A Bispecific alpha/beta T 99.9 1.9E-21 6.5E-26 157.1 14.9 74 195-268 133-222 (238)
170 2zg1_A Sialic acid-binding IG- 99.9 1.7E-21 5.9E-26 154.7 14.4 71 201-277 135-211 (214)
171 3esu_F Antibody 14B7* light ch 99.9 2.4E-21 8.3E-26 157.7 15.5 174 1-266 19-231 (250)
172 3auv_A SC-DSFV derived from th 99.9 4.4E-21 1.5E-25 158.4 16.8 171 1-268 27-236 (276)
173 1q9r_B S25-2 FAB (IGG1K) heavy 99.9 2.2E-21 7.4E-26 155.0 14.3 77 200-278 138-220 (222)
174 3umt_A SCFV heavy chain and li 99.9 6.5E-21 2.2E-25 155.7 17.5 174 1-269 17-232 (256)
175 1iga_A IGA1; immunoglobulin; N 99.9 1E-20 3.4E-25 168.6 20.1 248 1-272 141-445 (475)
176 3ojm_B Fibroblast growth facto 99.9 8.2E-22 2.8E-26 158.4 11.7 151 187-337 13-227 (231)
177 3juy_B 3B3 single chain varian 99.9 5.5E-21 1.9E-25 156.1 16.6 81 189-269 149-244 (256)
178 1ccz_A Protein (CD58); LFA-3, 99.9 1.6E-21 5.5E-26 148.6 12.4 147 1-277 10-167 (171)
179 3bkj_L WO2 IGG2A FAB fragment 99.9 5.1E-22 1.8E-26 161.8 10.2 169 1-277 49-247 (252)
180 2nzi_A Titin; IG-domain, FNIII 99.9 2E-20 7E-25 156.8 20.2 150 187-336 2-202 (305)
181 3d9a_H Heavy chain of hyhel10 99.9 1E-21 3.6E-26 155.4 11.5 75 200-275 129-208 (210)
182 3grw_A Fibroblast growth facto 99.9 2.9E-21 1E-25 156.3 13.7 154 188-341 10-228 (241)
183 3mj6_A Junctional adhesion mol 99.9 3E-21 1E-25 158.8 14.0 110 198-338 127-245 (268)
184 3rbs_A Myomesin-1; immunoglobu 99.9 4.2E-21 1.5E-25 151.1 14.1 138 190-330 4-206 (207)
185 4fmk_A Poliovirus receptor-rel 99.9 1.5E-21 5.3E-26 156.0 11.8 77 201-277 133-213 (225)
186 1svz_A Immunoglobulin;, single 99.9 8.1E-21 2.8E-25 154.2 15.9 169 1-267 16-228 (247)
187 2oz4_A Intercellular adhesion 99.9 1.1E-21 3.7E-26 161.2 10.6 205 90-332 13-265 (265)
188 2iep_A Muscle-specific kinase 99.9 2.5E-21 8.4E-26 151.0 12.0 145 187-333 5-192 (192)
189 2wv3_A Neuroplastin; igcam, me 99.9 3.4E-20 1.2E-24 144.3 18.4 136 189-331 3-190 (190)
190 2znx_A SCFV; fluorotryptohpan, 99.9 1.3E-20 4.3E-25 152.5 16.2 169 1-267 16-222 (242)
191 3uzq_A Anti-dengue MAB 4E11; d 99.9 8.1E-21 2.8E-25 154.8 14.9 173 1-269 16-231 (253)
192 1b6u_A KIR2DL3, P58 killer cel 99.9 5.2E-21 1.8E-25 155.3 13.6 155 1-268 21-183 (257)
193 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.9 9E-21 3.1E-25 154.8 15.0 178 1-270 18-235 (256)
194 3gkz_A Anti-methamphetamine si 99.9 2.6E-20 9E-25 152.2 17.8 81 189-269 141-236 (257)
195 3u83_A Poliovirus receptor-rel 99.9 1.4E-21 4.7E-26 165.9 10.6 140 195-336 138-325 (331)
196 2jll_A NCAM2, neural cell adhe 99.9 4.1E-20 1.4E-24 160.4 19.9 146 190-336 2-199 (389)
197 3ux9_B SCFV antibody; five hel 99.9 5.3E-20 1.8E-24 150.3 19.4 177 1-268 17-236 (256)
198 2c5d_C AXL oncogene, tyrosine- 99.9 3.4E-20 1.2E-24 144.9 17.0 139 189-329 2-191 (195)
199 3pv7_A B7-H6, IG-like domain-c 99.9 2E-20 6.8E-25 152.1 15.8 166 1-278 18-223 (248)
200 1dee_B IGM RF 2A2; FAB-IBP com 99.8 7E-20 2.4E-24 146.2 18.5 76 201-276 138-222 (223)
201 3eow_R Poliovirus receptor; im 99.8 2.2E-21 7.4E-26 154.9 9.4 77 202-278 128-209 (221)
202 4dzb_B Vbeta2 (MAIT T cell rec 99.8 5E-21 1.7E-25 155.4 11.4 167 1-272 16-222 (246)
203 1mju_H Immunoglobulin MS6-12; 99.8 1.7E-20 5.7E-25 150.2 13.9 172 1-280 15-216 (227)
204 1op3_H FAB 2G12, heavy chain; 99.8 8.1E-21 2.8E-25 151.9 11.9 76 201-277 140-221 (225)
205 1pz5_B Heavy chain of FAB (SYA 99.8 9.6E-21 3.3E-25 151.0 12.2 167 1-277 15-217 (220)
206 2dru_A Chimera of CD48 antigen 99.8 1.2E-20 4.2E-25 145.0 12.3 148 1-277 14-177 (180)
207 3bae_H WO2 IGG2A FAB fragment 99.8 1.6E-20 5.3E-25 150.6 13.4 79 200-279 141-224 (228)
208 3o4o_C Interleukin-1 receptor 99.8 1.1E-21 3.6E-26 167.2 6.8 225 88-331 26-335 (339)
209 2fbj_H IGA-kappa J539 FAB (hea 99.8 3E-20 1E-24 148.0 14.8 164 1-272 15-212 (220)
210 2v44_A NCAM2, neural cell adhe 99.8 1E-19 3.5E-24 141.4 17.4 138 192-330 5-186 (189)
211 3mtr_A N-CAM-1, NCAM-1, neural 99.8 6.3E-20 2.2E-24 145.7 16.4 147 187-334 17-212 (215)
212 1rhf_A Tyrosine-protein kinase 99.8 5.8E-20 2E-24 141.9 15.8 140 189-330 2-182 (182)
213 2gki_A Nuclease; anti-DNA anti 99.8 5.2E-20 1.8E-24 153.0 15.7 79 190-268 160-258 (291)
214 2rgs_A I, IG gamma-2B heavy ch 99.8 4.2E-21 1.4E-25 152.7 8.5 66 1-66 26-101 (218)
215 2gjj_A A21 single-chain antibo 99.8 5.3E-20 1.8E-24 150.7 15.1 175 1-267 20-239 (264)
216 2vol_A Murine IGG FC; FC, zinc 99.8 8.3E-21 2.8E-25 149.8 9.9 163 1-270 18-197 (207)
217 3bqu_C 3H6 FAB light chain; be 99.8 4E-22 1.4E-26 160.5 2.3 162 1-270 38-224 (233)
218 4fa8_A Secreted protein BARF1; 99.8 3.9E-20 1.3E-24 144.8 13.5 127 198-324 2-195 (203)
219 3o3u_N Maltose-binding peripla 99.8 2.4E-20 8.2E-25 170.4 13.7 76 1-78 381-470 (581)
220 3sgj_C Human FCG3A receptor; r 99.8 1.4E-20 4.8E-25 147.9 10.5 140 187-336 5-179 (204)
221 1epf_A NCAM, protein (neural c 99.8 2.4E-19 8.1E-24 139.6 16.9 142 189-330 2-190 (191)
222 3knb_B Obscurin-like protein 1 99.8 2.7E-20 9.2E-25 129.6 10.2 95 187-281 11-105 (107)
223 3nl4_H Antigen binding fragmen 99.8 3.3E-20 1.1E-24 147.4 12.1 171 1-279 14-212 (215)
224 2v5t_A NCAM2, N-CAM 2, neural 99.8 6.8E-20 2.3E-24 142.4 13.4 142 189-331 2-188 (189)
225 1gsm_A Madcam-1, mucosal addre 99.8 3.9E-19 1.3E-23 137.9 17.0 73 1-78 22-96 (210)
226 1dn0_B IGM-kappa cold agglutin 99.8 3.8E-19 1.3E-23 142.8 17.2 79 201-279 137-225 (232)
227 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 1.5E-19 5.3E-24 148.5 15.1 77 1-77 30-127 (268)
228 2r15_A Myomesin-1; sarcomeric 99.8 2.8E-19 9.7E-24 141.6 16.0 131 202-332 15-211 (212)
229 1f2q_A High affinity immunoglo 99.8 4.7E-20 1.6E-24 141.6 10.2 139 187-335 2-175 (176)
230 2wng_A Tyrosine-protein phosph 99.8 3.3E-19 1.1E-23 151.0 16.1 231 89-323 12-311 (327)
231 3bp6_B Programmed cell death 1 99.8 3.7E-19 1.3E-23 139.8 15.4 142 195-336 8-198 (202)
232 2v9r_A Roundabout homolog 1; p 99.8 4.1E-20 1.4E-24 146.4 9.8 153 187-339 7-210 (212)
233 3q5y_A TCR N15 beta; IG, T cel 99.8 3E-19 1E-23 144.4 15.0 75 197-271 130-214 (240)
234 2vr9_A Roundabout 1, ROBO; imm 99.8 2.2E-19 7.6E-24 142.8 13.9 148 187-334 7-209 (217)
235 1fnl_A Low affinity immunoglob 99.8 1.6E-19 5.5E-24 138.4 12.4 136 187-332 5-175 (175)
236 2xqy_G A13-D6.3 monoclonal ant 99.8 2E-19 6.8E-24 146.7 13.5 81 200-281 140-225 (261)
237 3jz7_A MCAR, CAR, coxsackievir 99.8 1.5E-19 5E-24 143.4 11.8 138 196-333 7-214 (214)
238 3mtr_A N-CAM-1, NCAM-1, neural 99.8 2.3E-19 7.7E-24 142.5 12.8 78 1-78 33-113 (215)
239 1c5d_H Monoclonal antibody aga 99.8 2.6E-19 9E-24 142.0 13.0 75 201-277 134-212 (215)
240 3p2t_A Leukocyte immunoglobuli 99.8 2.7E-19 9.4E-24 139.8 12.7 141 187-330 3-195 (196)
241 3fku_X Neutralizing antibody F 99.8 7.4E-19 2.5E-23 145.2 15.9 78 190-268 141-234 (280)
242 4ei6_B Vbeta16 XV19 type II na 99.8 2.2E-19 7.7E-24 145.5 12.5 76 197-272 132-221 (245)
243 3k0w_A Mucosa-associated lymph 99.8 4.1E-19 1.4E-23 141.3 13.6 139 187-334 16-205 (218)
244 2c1o_A IGK-C protein; FAB frag 99.8 4.8E-19 1.7E-23 144.4 14.1 132 190-321 39-245 (254)
245 3mjg_X Beta-type platelet-deri 99.8 2.5E-18 8.7E-23 142.9 18.6 222 89-336 9-283 (289)
246 3m8o_H Immunoglobulin A1 heavy 99.8 9.4E-19 3.2E-23 139.5 15.2 71 202-272 136-214 (221)
247 3knb_A Titin; IG-like, titin, 99.8 3.6E-19 1.2E-23 122.3 11.0 93 187-279 3-97 (100)
248 1f97_A Junction adhesion molec 99.8 4.5E-19 1.5E-23 140.4 13.2 138 190-331 2-207 (212)
249 3bn9_D E2 FAB heavy chain; ant 99.8 1.3E-19 4.5E-24 147.2 9.9 77 200-277 144-226 (257)
250 3omz_A Human vdelta1 gamma del 99.8 1.1E-19 3.9E-24 148.5 9.5 173 1-267 17-231 (259)
251 3nfj_J T cell receptor beta ch 99.8 6.8E-19 2.3E-23 142.7 14.0 167 1-272 16-221 (245)
252 1zvo_C Myeloma immunoglobulin 99.8 5.2E-18 1.8E-22 152.1 20.5 246 1-271 150-493 (512)
253 2ifg_A High affinity nerve gro 99.8 1E-19 3.4E-24 155.4 8.9 145 187-333 156-347 (347)
254 3pl6_D MBP peptide / T-cell re 99.8 8.1E-19 2.8E-23 144.2 13.8 165 1-271 41-242 (268)
255 1vca_A VCAM-D1,2, human vascul 99.8 3E-18 1E-22 134.3 16.3 132 199-334 11-200 (202)
256 3knb_B Obscurin-like protein 1 99.8 6E-19 2.1E-23 122.7 10.3 78 1-78 28-106 (107)
257 1i1c_A IGG2A, IG gamma-2A chai 99.8 1.8E-19 6.1E-24 145.0 8.7 67 1-67 32-108 (239)
258 3liz_H 4C3 monoclonal antibody 99.8 2E-18 7E-23 140.4 14.3 80 200-280 135-219 (253)
259 1l6x_A Immunoglobulin gamma-1 99.8 5.3E-19 1.8E-23 139.4 10.3 68 203-270 123-197 (207)
260 2w59_A IGY FCU3-4; immunoglobu 99.8 3.9E-19 1.3E-23 142.6 9.6 66 1-66 28-102 (231)
261 3s97_C Contactin-1; carbonic a 99.8 6.8E-19 2.3E-23 138.1 10.4 140 192-331 11-201 (201)
262 4f80_A Butyrophilin subfamily 99.8 1.9E-18 6.6E-23 138.2 13.2 135 197-331 12-213 (226)
263 2x1w_L Vascular endothelial gr 99.8 1.6E-18 5.6E-23 137.2 12.5 137 196-336 14-212 (213)
264 3qib_D 2B4 beta chain; IG doma 99.8 2.2E-18 7.5E-23 141.8 13.4 76 197-272 157-246 (270)
265 3ry4_A Low affinity immunoglob 99.8 2.3E-18 7.8E-23 131.4 12.3 133 188-330 3-170 (170)
266 1hxm_B Gamma-delta T-cell rece 99.8 4.7E-18 1.6E-22 137.4 14.2 73 199-273 142-221 (242)
267 3knb_A Titin; IG-like, titin, 99.8 3.2E-18 1.1E-22 117.6 11.2 77 1-77 20-99 (100)
268 2v5y_A Receptor-type tyrosine- 99.8 1.1E-17 3.9E-22 156.7 18.5 146 188-334 164-357 (731)
269 2wbj_D OB TCR; transmembrane, 99.8 4.1E-18 1.4E-22 140.8 13.8 167 1-272 39-247 (279)
270 2d3v_A Leukocyte immunoglobuli 99.8 3.1E-18 1E-22 133.8 11.4 130 187-319 3-180 (196)
271 1ugn_A LIR1, leukocyte immunog 99.8 1.2E-18 3.9E-23 136.5 8.4 141 187-330 3-197 (198)
272 2gi7_A GPVI protein; IG-like d 99.8 7.2E-18 2.5E-22 130.3 12.2 121 187-319 6-168 (184)
273 3b5h_A Cervical EMMPRIN, HAB18 99.8 2.9E-17 9.8E-22 126.9 15.4 125 199-331 8-183 (184)
274 3to4_D NKT vbeta2 (mouse varia 99.8 3E-18 1E-22 139.5 10.3 71 200-270 135-219 (253)
275 1bec_A 14.3.D T cell antigen r 99.8 1.6E-17 5.4E-22 133.9 14.3 72 199-270 131-212 (238)
276 1hng_A CD2; T lymphocyte adhes 99.8 4.1E-18 1.4E-22 130.5 10.1 129 198-329 5-174 (176)
277 1uct_A Immunoglobulin alpha FC 99.7 3.2E-18 1.1E-22 135.8 9.4 144 187-333 7-200 (218)
278 2cqv_A MLCK, myosin light chai 99.7 2.3E-17 8E-22 116.7 12.9 92 187-278 5-96 (114)
279 3r4d_A CEA-related cell adhesi 99.7 6.3E-18 2.2E-22 133.3 10.8 138 197-335 7-204 (208)
280 1nbq_A JAM, junctional adhesio 99.7 1.1E-18 3.9E-23 137.7 6.4 139 188-330 3-208 (209)
281 1oll_A NK receptor; immune sys 99.7 2E-17 6.8E-22 128.3 13.1 140 188-330 3-187 (188)
282 3qhz_H Human monoclonal antibo 99.7 1E-17 3.4E-22 134.6 11.1 91 189-280 132-228 (232)
283 3tv3_H PGT128 heavy chain, IG 99.7 1.1E-17 3.9E-22 134.8 11.2 90 189-279 140-235 (239)
284 1jbj_A CD3 epsilon and gamma e 99.7 5.1E-18 1.8E-22 131.3 8.7 117 200-332 10-185 (186)
285 3shs_A HOC head outer capsid p 99.7 7.1E-16 2.4E-20 120.5 20.3 141 1-269 17-169 (304)
286 3qp3_A Titin; I-SET IG-like, s 99.7 3.1E-17 1.1E-21 113.8 11.5 94 187-280 6-99 (103)
287 2fbo_J V1V2;, variable region- 99.7 1.4E-17 4.8E-22 135.3 11.2 134 195-329 8-250 (250)
288 4frw_A Poliovirus receptor-rel 99.7 2.1E-17 7.2E-22 131.1 11.9 137 196-332 6-212 (218)
289 3mj8_L Stimulatory hamster ant 99.7 3.4E-17 1.2E-21 129.7 11.9 134 192-326 4-208 (213)
290 1wit_A Twitchin 18TH IGSF modu 99.7 4.1E-17 1.4E-21 110.8 10.3 88 189-278 2-91 (93)
291 1ypz_F T-cell receptor gamma c 99.7 8.7E-17 3E-21 128.8 13.7 71 198-270 139-216 (230)
292 2e7c_A Myosin-binding protein 99.7 1.1E-16 3.8E-21 113.9 12.6 95 187-282 19-116 (118)
293 1waa_A Titin; metal binding pr 99.7 5.7E-17 1.9E-21 109.6 10.3 81 187-268 3-83 (93)
294 1p6f_A NKP46, natural cytotoxi 99.7 1.1E-16 3.8E-21 128.8 13.8 144 187-333 5-193 (242)
295 2lu7_A Obscurin-like protein 1 99.7 3.5E-17 1.2E-21 108.0 8.5 72 1-77 11-83 (84)
296 3puc_A Titin; I-SET IG-like do 99.7 1E-16 3.5E-21 110.3 11.4 92 187-278 4-95 (99)
297 1g1c_A Immunoglobulin-like dom 99.7 1E-16 3.5E-21 110.3 11.3 93 187-279 3-96 (99)
298 2e7c_A Myosin-binding protein 99.7 8E-17 2.7E-21 114.6 11.0 79 1-79 39-117 (118)
299 2yuz_A Myosin-binding protein 99.7 7E-17 2.4E-21 110.8 10.2 89 187-277 5-93 (100)
300 3u2s_H PG9 heavy chain; greek 99.7 9.9E-17 3.4E-21 129.8 12.7 91 189-280 141-237 (248)
301 2aty_A Complement receptor chi 99.7 7.7E-17 2.6E-21 138.7 12.7 163 1-270 183-362 (376)
302 3d9a_L Light chain of hyhel10 99.7 1E-16 3.5E-21 126.9 12.2 131 194-324 6-206 (213)
303 2bk8_A Connectin, M1, titin he 99.7 4.4E-16 1.5E-20 106.6 13.7 89 192-280 4-93 (97)
304 2cqv_A MLCK, myosin light chai 99.7 9.2E-17 3.1E-21 113.6 10.3 82 1-82 22-104 (114)
305 4acp_A IG gamma-1 chain C regi 99.7 4.1E-17 1.4E-21 130.8 9.5 66 1-66 39-114 (240)
306 1he7_A High affinity nerve gro 99.7 9.6E-17 3.3E-21 113.2 10.1 80 1-80 15-102 (126)
307 3irg_B Obscurin-like protein 1 99.7 1E-16 3.5E-21 112.0 10.2 94 187-280 11-104 (107)
308 4fmk_A Poliovirus receptor-rel 99.7 7E-17 2.4E-21 128.7 10.4 135 198-332 10-220 (225)
309 3sbw_C Programmed cell death 1 99.7 6.6E-16 2.2E-20 123.0 16.1 139 196-335 8-215 (222)
310 1oga_E TRBC1, T-cell receptor 99.7 1.4E-16 4.7E-21 129.6 12.0 76 197-272 131-220 (252)
311 2lvc_A Obscurin-like protein 1 99.7 5E-17 1.7E-21 109.0 7.8 79 188-267 3-83 (91)
312 1g1c_A Immunoglobulin-like dom 99.7 2.3E-16 8E-21 108.5 11.2 77 1-77 20-98 (99)
313 3qp3_A Titin; I-SET IG-like, s 99.7 2.5E-16 8.6E-21 109.2 11.3 78 1-78 23-101 (103)
314 1wit_A Twitchin 18TH IGSF modu 99.7 1.1E-16 3.7E-21 108.7 9.3 75 1-76 17-93 (93)
315 2wqr_A IG epsilon chain C regi 99.7 1.9E-17 6.4E-22 139.9 6.6 128 193-320 117-309 (323)
316 1fhg_A Telokin; immunoglobulin 99.7 3.2E-16 1.1E-20 117.0 12.5 107 187-342 39-145 (154)
317 2kdg_A Myotilin; immonoglobuli 99.7 1.4E-16 4.7E-21 109.8 9.6 94 187-280 3-97 (100)
318 2lu7_A Obscurin-like protein 1 99.7 1E-16 3.5E-21 105.7 8.3 71 197-268 4-74 (84)
319 1ow0_A IG alpha-1 chain C regi 99.7 6.7E-18 2.3E-22 133.7 3.0 71 200-270 118-200 (214)
320 1b6u_A KIR2DL3, P58 killer cel 99.7 3.5E-16 1.2E-20 126.9 13.1 150 187-341 5-210 (257)
321 1u2h_A APEG-1, aortic preferen 99.7 1.9E-16 6.5E-21 108.9 9.8 93 187-279 3-96 (99)
322 1nct_A Titin; cell adhesion, g 99.7 6.2E-17 2.1E-21 112.6 7.2 93 187-279 12-104 (106)
323 1gxe_A Myosin binding protein 99.7 1.2E-16 4E-21 116.2 8.9 76 1-76 33-138 (139)
324 3n9g_H FAB fragment of MAB CR4 99.7 3.9E-16 1.3E-20 125.0 12.8 78 200-280 139-224 (230)
325 2kdg_A Myotilin; immonoglobuli 99.7 3.5E-16 1.2E-20 107.8 10.9 78 1-78 20-99 (100)
326 1he7_A High affinity nerve gro 99.7 8.1E-16 2.8E-20 108.4 12.6 93 187-283 2-101 (126)
327 2kkq_A Myotilin; unknown funct 99.7 6.1E-16 2.1E-20 109.5 12.0 95 187-281 13-109 (116)
328 3irg_A Titin; IG-like, titin, 99.7 3.9E-16 1.3E-20 107.6 10.7 91 188-278 4-96 (100)
329 2dm3_A KIAA0992 protein, palla 99.7 1.2E-16 4E-21 112.3 8.2 101 187-336 7-107 (110)
330 2bk8_A Connectin, M1, titin he 99.7 6.4E-16 2.2E-20 105.8 11.7 78 1-78 16-95 (97)
331 1u2h_A APEG-1, aortic preferen 99.7 4.1E-16 1.4E-20 107.3 10.5 77 1-77 20-98 (99)
332 4i0k_A CD276 antigen; immunogl 99.7 7.5E-17 2.6E-21 128.5 7.6 144 198-342 4-217 (222)
333 2dm2_A Palladin; beta-sandwich 99.7 4.1E-16 1.4E-20 109.4 10.5 92 187-278 6-99 (110)
334 1mq8_A ICAM-1, intercellular a 99.7 7.8E-16 2.7E-20 126.3 13.6 246 1-278 14-279 (291)
335 1wwb_X Protein (brain derived 99.7 2.1E-16 7.3E-21 109.2 8.8 79 1-79 16-100 (103)
336 1lk3_L 9D7 light chain; antige 99.7 1.1E-15 3.8E-20 120.6 13.8 128 196-323 7-204 (210)
337 1nkr_A P58-CL42 KIR; inhibitor 99.7 1.6E-15 5.3E-20 118.9 14.3 128 187-318 6-184 (201)
338 2edj_A Roundabout homolog 2; K 99.7 3.3E-16 1.1E-20 107.9 9.0 92 187-280 6-97 (100)
339 1wwb_X Protein (brain derived 99.7 1.6E-15 5.4E-20 104.8 12.5 83 202-284 14-101 (103)
340 3puc_A Titin; I-SET IG-like do 99.7 9.1E-16 3.1E-20 105.5 11.3 77 1-77 21-98 (99)
341 1gxe_A Myosin binding protein 99.7 4.2E-16 1.4E-20 113.3 9.6 84 196-279 25-137 (139)
342 2kkq_A Myotilin; unknown funct 99.7 9.4E-16 3.2E-20 108.5 11.2 80 1-80 30-112 (116)
343 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.7E-15 5.9E-20 123.4 14.2 79 191-269 5-100 (256)
344 3irg_B Obscurin-like protein 1 99.7 7.4E-16 2.5E-20 107.6 10.3 78 1-78 28-106 (107)
345 2dm2_A Palladin; beta-sandwich 99.7 3.5E-16 1.2E-20 109.8 8.6 81 1-81 23-106 (110)
346 3tv3_L PGT128 light chain, IG 99.7 4E-16 1.4E-20 123.3 10.0 127 198-326 9-206 (211)
347 2lvc_A Obscurin-like protein 1 99.7 2.8E-16 9.4E-21 105.4 7.6 70 1-75 21-91 (91)
348 2yuz_A Myosin-binding protein 99.7 5.1E-16 1.7E-20 106.5 9.1 75 1-79 22-97 (100)
349 3pv7_A B7-H6, IG-like domain-c 99.7 9.8E-16 3.4E-20 124.2 12.3 135 196-330 10-225 (248)
350 2e6p_A Obscurin-like protein 1 99.7 1.2E-15 4.2E-20 105.8 11.0 92 188-280 6-100 (104)
351 1f3r_B FV antibody fragment; I 99.7 1.9E-15 6.5E-20 123.2 13.8 73 197-269 8-102 (257)
352 2if7_A SLAM family member 6; N 99.6 9.9E-16 3.4E-20 119.1 11.3 128 196-326 5-187 (193)
353 3mlr_H Human monoclonal anti-H 99.6 6.2E-16 2.1E-20 123.5 10.3 88 189-279 129-224 (226)
354 1ypz_E T cell receptor delta, 99.6 1.4E-15 4.7E-20 119.6 12.2 63 1-64 16-94 (207)
355 3s96_B 3B5H10 FAB light chain; 99.6 6.7E-16 2.3E-20 122.6 10.5 133 192-325 4-214 (218)
356 3kvq_A Vascular endothelial gr 99.6 3.7E-16 1.3E-20 109.4 7.9 93 187-281 8-100 (108)
357 2yr3_A Myosin light chain kina 99.6 4.5E-16 1.5E-20 107.0 8.1 89 187-278 9-97 (99)
358 3irg_A Titin; IG-like, titin, 99.6 1.5E-15 5.2E-20 104.6 10.8 77 1-77 20-99 (100)
359 3iu4_H CHP3 FAB heavy chain; a 99.6 4.6E-16 1.6E-20 127.0 9.4 78 200-280 138-223 (263)
360 2ckn_A Basic fibroblast growth 99.6 1.1E-15 3.7E-20 104.1 9.7 87 187-278 7-93 (95)
361 1za6_B IGG heavy chain; immuno 99.6 2E-15 6.8E-20 128.6 13.6 175 90-271 10-207 (344)
362 3sob_H Antibody heavy chain, l 99.6 3.9E-15 1.3E-19 121.2 14.7 78 200-280 165-250 (256)
363 3auv_A SC-DSFV derived from th 99.6 4.9E-15 1.7E-19 122.1 15.4 81 189-269 12-106 (276)
364 1sy6_A T-cell surface glycopro 99.6 1E-16 3.5E-21 125.8 5.0 119 201-330 15-203 (204)
365 1ccz_A Protein (CD58); LFA-3, 99.6 9.5E-16 3.2E-20 116.6 9.8 130 198-328 4-168 (171)
366 3nl4_L Antigen binding fragmen 99.6 1.9E-15 6.4E-20 119.6 11.9 79 191-269 3-95 (213)
367 2eo9_A Roundabout homolog 1; b 99.6 1.3E-15 4.5E-20 108.3 9.8 90 187-279 6-96 (118)
368 1q0x_L FAB 9B1, light chain; a 99.6 5.6E-15 1.9E-19 116.7 14.2 129 196-324 7-208 (212)
369 2ghw_B Anti-SARS SCFV antibody 99.6 9.2E-15 3.2E-19 118.4 15.7 71 197-267 10-103 (247)
370 1hnf_A CD2; T lymphocyte adhes 99.6 3.2E-15 1.1E-19 114.5 12.1 127 197-327 7-177 (182)
371 1waa_A Titin; metal binding pr 99.6 2.1E-15 7.1E-20 101.8 9.8 72 1-77 20-92 (93)
372 2eny_A Obscurin; beta-sandwich 99.6 6.6E-16 2.3E-20 106.9 7.4 88 187-278 6-94 (104)
373 2dm3_A KIAA0992 protein, palla 99.6 3.8E-16 1.3E-20 109.6 6.3 82 1-82 24-107 (110)
374 3uzq_A Anti-dengue MAB 4E11; d 99.6 4.4E-15 1.5E-19 120.7 13.4 144 194-337 6-250 (253)
375 2dlt_A Myosin binding protein 99.6 1.9E-15 6.5E-20 105.2 9.6 91 187-278 6-96 (106)
376 2eo9_A Roundabout homolog 1; b 99.6 6.2E-16 2.1E-20 110.0 7.3 78 1-80 23-101 (118)
377 3r06_A Anti-mouse CD3epsilon a 99.6 5.4E-15 1.9E-19 116.9 13.2 79 191-269 3-95 (213)
378 1x44_A Myosin-binding protein 99.6 5.2E-15 1.8E-19 102.4 11.5 78 188-266 6-85 (103)
379 2yr3_A Myosin light chain kina 99.6 8.5E-16 2.9E-20 105.6 7.4 74 1-76 26-99 (99)
380 1nct_A Titin; cell adhesion, g 99.6 5E-16 1.7E-20 108.0 6.1 76 1-76 29-105 (106)
381 2edj_A Roundabout homolog 2; K 99.6 8.8E-16 3E-20 105.7 7.2 76 1-78 23-99 (100)
382 1nqb_A Single-chain antibody f 99.6 1.1E-14 3.8E-19 118.5 14.7 138 196-333 7-235 (256)
383 1nfd_E H57 FAB; complex (immun 99.6 5.8E-16 2E-20 122.4 6.9 128 196-323 6-204 (212)
384 2edf_A Obscurin; beta-sandwich 99.6 3.5E-15 1.2E-19 103.3 9.9 79 187-266 6-84 (103)
385 1fhg_A Telokin; immunoglobulin 99.6 4.9E-15 1.7E-19 110.6 11.1 80 1-80 56-137 (154)
386 2p1y_A Bispecific alpha/beta T 99.6 7.8E-15 2.7E-19 118.1 13.2 75 194-269 5-97 (238)
387 2cr6_A KIAA1556 protein, obscu 99.6 2.6E-15 9E-20 106.1 9.0 102 188-342 12-113 (115)
388 2pet_A Lutheran blood group gl 99.6 6.7E-16 2.3E-20 123.7 6.7 82 196-278 7-111 (231)
389 3umt_A SCFV heavy chain and li 99.6 9.5E-15 3.3E-19 119.0 13.6 140 197-336 10-250 (256)
390 2yuv_A Myosin-binding protein 99.6 1.6E-14 5.3E-19 99.4 12.5 91 188-283 6-97 (100)
391 2edh_A Obscurin; structural ge 99.6 3.3E-14 1.1E-18 100.1 14.4 88 188-281 18-105 (113)
392 1iam_A ICAM-1, CD54, intercell 99.6 2.9E-14 1E-18 108.0 14.9 68 199-269 96-166 (185)
393 3sob_L Antibody light chain; b 99.6 1.5E-14 5.2E-19 116.3 14.2 137 190-326 25-231 (237)
394 3cx2_A Myosin-binding protein 99.6 1E-14 3.5E-19 101.8 11.5 92 188-279 3-106 (108)
395 3kvq_A Vascular endothelial gr 99.6 1.4E-15 4.8E-20 106.3 7.1 79 1-80 25-103 (108)
396 2k1m_A Myosin-binding protein 99.6 1.8E-14 6.2E-19 98.0 12.3 86 188-278 7-92 (95)
397 2znx_A SCFV; fluorotryptohpan, 99.6 1.6E-14 5.4E-19 116.6 14.0 78 192-269 4-95 (242)
398 3esu_F Antibody 14B7* light ch 99.6 4.4E-14 1.5E-18 114.6 16.7 80 190-269 5-98 (250)
399 3gkz_A Anti-methamphetamine si 99.6 2.5E-14 8.5E-19 116.6 14.8 75 193-267 12-108 (257)
400 2zg1_A Sialic acid-binding IG- 99.6 1.1E-14 3.7E-19 115.3 12.2 134 196-329 7-211 (214)
401 2ckn_A Basic fibroblast growth 99.6 5.4E-15 1.8E-19 100.6 9.0 71 1-75 24-94 (95)
402 3caf_A Fibroblast growth facto 99.6 1.8E-15 6.3E-20 104.1 6.7 75 1-75 23-99 (100)
403 3juy_B 3B3 single chain varian 99.6 1.3E-14 4.4E-19 118.2 12.9 81 187-267 4-107 (256)
404 3caf_A Fibroblast growth facto 99.6 1.3E-15 4.6E-20 104.8 6.0 82 197-278 16-98 (100)
405 1x44_A Myosin-binding protein 99.6 8.8E-15 3E-19 101.2 9.9 75 1-80 22-99 (103)
406 3eow_R Poliovirus receptor; im 99.6 2.7E-15 9.2E-20 119.4 8.2 138 197-336 7-215 (221)
407 2j6e_L IGM, FAB light chain; a 99.6 9.6E-15 3.3E-19 117.3 11.3 130 196-325 26-229 (234)
408 1moe_A Anti-CEA MAB T84.66; an 99.6 1.3E-14 4.5E-19 117.0 12.2 78 192-269 4-99 (240)
409 3bkj_L WO2 IGG2A FAB fragment 99.6 2.6E-14 8.9E-19 116.1 13.9 81 189-269 34-133 (252)
410 2edn_A Myosin-binding protein 99.6 6E-15 2.1E-19 102.9 8.6 94 187-280 10-115 (118)
411 1wwc_A Protein (NT-3 growth fa 99.6 2.3E-14 8E-19 101.8 11.9 93 187-282 6-102 (118)
412 1c1e_H Catalytic antibody 1E9 99.6 1.4E-14 4.8E-19 115.1 11.7 74 196-269 7-103 (219)
413 1pd6_A Cardiac MYBP-C;, myosin 99.6 1.2E-14 3.9E-19 100.5 9.7 79 187-266 13-93 (104)
414 2dav_A SLOW MYBP-C, myosin-bin 99.6 3.1E-15 1.1E-19 105.6 6.7 92 190-281 8-111 (126)
415 2cr3_A Basic fibroblast growth 99.6 7.4E-15 2.5E-19 100.8 8.4 76 1-80 18-93 (99)
416 2edk_A Myosin-binding protein 99.6 1.7E-15 5.8E-20 104.4 5.2 80 187-267 6-89 (101)
417 2cry_A KIN of IRRE-like protei 99.6 1.9E-15 6.4E-20 108.2 5.5 93 187-280 12-112 (122)
418 2xzc_L FAB A.17 light chain; i 99.6 3.7E-14 1.3E-18 112.4 13.5 74 196-269 7-96 (216)
419 3bfo_A Mucosa-associated lymph 99.6 1.9E-14 6.5E-19 97.0 10.1 75 189-272 3-77 (91)
420 1svz_A Immunoglobulin;, single 99.6 2.9E-14 9.9E-19 115.5 12.9 78 192-269 4-100 (247)
421 2eny_A Obscurin; beta-sandwich 99.6 6.8E-15 2.3E-19 101.8 7.6 76 1-80 23-100 (104)
422 1dr9_A B7-1 (CD80), T lymphocy 99.6 1.4E-14 4.9E-19 113.3 10.5 129 198-327 3-197 (201)
423 2dav_A SLOW MYBP-C, myosin-bin 99.6 3.5E-15 1.2E-19 105.3 5.9 77 1-77 22-111 (126)
424 3ux9_B SCFV antibody; five hel 99.6 1E-13 3.4E-18 112.9 15.5 73 197-269 10-98 (256)
425 1wwc_A Protein (NT-3 growth fa 99.6 1.7E-14 5.9E-19 102.5 9.5 79 2-80 21-104 (118)
426 2e7b_A Obscurin; IG-like domai 99.6 2.1E-14 7.2E-19 99.3 9.2 77 187-264 6-82 (103)
427 2e6p_A Obscurin-like protein 1 99.6 1.4E-14 4.6E-19 100.5 8.1 75 1-80 25-100 (104)
428 2e6q_A Obscurin-like protein 1 99.5 7.7E-14 2.6E-18 96.7 11.8 90 187-281 6-105 (112)
429 2cr3_A Basic fibroblast growth 99.5 2.4E-14 8E-19 98.2 9.1 80 196-280 10-89 (99)
430 2yuv_A Myosin-binding protein 99.5 3.3E-14 1.1E-18 97.7 9.9 74 1-79 23-97 (100)
431 1mju_H Immunoglobulin MS6-12; 99.5 4E-14 1.4E-18 113.0 11.7 139 196-335 7-221 (227)
432 3cx2_A Myosin-binding protein 99.5 3E-14 1E-18 99.4 9.5 76 1-76 19-107 (108)
433 3u1s_H FAB PGT145 heavy chain; 99.5 3.4E-14 1.2E-18 116.3 11.3 76 201-279 180-263 (267)
434 1qok_A MFE-23 recombinant anti 99.5 9.8E-14 3.3E-18 114.6 14.0 76 194-269 31-129 (282)
435 2edf_A Obscurin; beta-sandwich 99.5 1.3E-14 4.4E-19 100.4 7.3 76 1-81 23-99 (103)
436 2dku_A KIAA1556 protein; beta- 99.5 8.2E-14 2.8E-18 96.3 11.1 87 187-278 6-92 (103)
437 3omz_A Human vdelta1 gamma del 99.5 1.6E-14 5.4E-19 117.9 8.6 80 190-269 3-103 (259)
438 2k1m_A Myosin-binding protein 99.5 5.2E-14 1.8E-18 95.7 9.8 71 1-76 23-94 (95)
439 2edn_A Myosin-binding protein 99.5 1.2E-14 4E-19 101.5 6.4 78 1-78 27-117 (118)
440 2dru_A Chimera of CD48 antigen 99.5 5E-14 1.7E-18 107.9 10.6 126 197-327 7-177 (180)
441 3bfo_A Mucosa-associated lymph 99.5 3.3E-14 1.1E-18 95.8 8.4 69 1-77 18-87 (91)
442 4hwu_A Fibroblast growth facto 99.5 5.8E-14 2E-18 95.5 9.6 74 1-79 16-89 (95)
443 2cpc_A KIAA0657 protein; immun 99.5 1.4E-13 4.7E-18 97.0 11.8 67 199-266 23-89 (113)
444 1pd6_A Cardiac MYBP-C;, myosin 99.5 4.8E-14 1.6E-18 97.4 9.2 71 1-76 31-103 (104)
445 1q9r_B S25-2 FAB (IGG1K) heavy 99.5 6.3E-14 2.2E-18 111.5 11.1 131 197-328 8-220 (222)
446 3d9a_H Heavy chain of hyhel10 99.5 5.7E-14 1.9E-18 110.8 10.5 127 196-324 7-207 (210)
447 2edk_A Myosin-binding protein 99.5 5.5E-15 1.9E-19 101.8 4.1 73 1-78 23-100 (101)
448 2gjj_A A21 single-chain antibo 99.5 1.7E-13 5.7E-18 112.0 13.5 81 189-269 5-105 (264)
449 1gl4_B Basement membrane-speci 99.5 6.5E-14 2.2E-18 95.9 9.2 72 1-76 25-97 (98)
450 2v9t_A Roundabout homolog 1; s 99.5 1.2E-14 4.1E-19 103.1 5.5 88 187-274 7-101 (117)
451 1hxm_A Gamma-delta T-cell rece 99.5 2.5E-13 8.7E-18 108.1 13.6 63 1-63 16-97 (229)
452 3m45_A Cell adhesion molecule 99.5 1.5E-13 5.2E-18 95.8 11.0 94 187-281 4-106 (108)
453 3s35_X Vascular endothelial gr 99.5 7.2E-14 2.4E-18 99.9 9.3 80 1-80 23-113 (122)
454 2dm7_A KIAA1556 protein; beta- 99.5 1.7E-13 5.8E-18 95.6 10.7 78 187-266 6-83 (108)
455 1pz5_B Heavy chain of FAB (SYA 99.5 1.3E-13 4.3E-18 109.6 11.3 130 196-326 7-216 (220)
456 2e6q_A Obscurin-like protein 1 99.5 1.2E-13 4E-18 95.8 9.4 75 1-80 23-108 (112)
457 3fku_X Neutralizing antibody F 99.5 1.6E-13 5.3E-18 113.2 11.7 72 196-267 7-101 (280)
458 4dzb_B Vbeta2 (MAIT T cell rec 99.5 2.9E-13 1E-17 109.4 12.8 77 192-268 4-100 (246)
459 2ens_A Advanced glycosylation 99.5 2.7E-14 9.1E-19 97.4 5.4 77 187-272 8-84 (96)
460 2cpc_A KIAA0657 protein; immun 99.5 1.8E-13 6E-18 96.4 9.7 74 1-79 28-102 (113)
461 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 3.3E-13 1.1E-17 110.6 12.8 82 188-269 14-114 (268)
462 2dlt_A Myosin binding protein 99.5 2.9E-14 1E-18 99.1 5.5 74 1-77 23-97 (106)
463 2cry_A KIN of IRRE-like protei 99.5 9.6E-15 3.3E-19 104.4 3.1 78 1-78 28-114 (122)
464 3f8u_B Tapasin; endoplasmic re 99.5 1.5E-12 5E-17 110.0 16.5 39 39-77 252-290 (401)
465 1gl4_B Basement membrane-speci 99.5 2.9E-13 1E-17 92.6 10.2 79 195-278 16-95 (98)
466 3rbg_A Cytotoxic and regulator 99.5 2.1E-13 7.3E-18 97.6 9.9 79 1-80 16-104 (124)
467 2edh_A Obscurin; structural ge 99.5 2.7E-13 9.3E-18 95.4 10.3 74 1-80 34-108 (113)
468 2dku_A KIAA1556 protein; beta- 99.5 1.8E-13 6.1E-18 94.6 9.0 76 1-81 23-99 (103)
469 4hwu_A Fibroblast growth facto 99.5 2.3E-13 7.7E-18 92.5 9.3 80 196-281 8-87 (95)
470 3so5_A LIG-3, leucine-rich rep 99.5 2.7E-13 9.3E-18 95.2 10.1 91 187-277 8-109 (112)
471 3qr2_A Basigin; CD147, EMMPRIN 99.5 9.7E-14 3.3E-18 101.4 7.7 86 187-272 19-117 (137)
472 2e7b_A Obscurin; IG-like domai 99.5 9.7E-14 3.3E-18 95.9 7.3 75 1-80 23-98 (103)
473 2eo1_A OBSCN protein, cDNA FLJ 99.5 2E-13 6.7E-18 94.2 8.7 71 197-268 19-89 (102)
474 2v9t_A Roundabout homolog 1; s 99.5 7.4E-14 2.5E-18 99.0 6.7 78 1-78 24-110 (117)
475 3s35_X Vascular endothelial gr 99.5 2E-13 6.9E-18 97.5 9.0 87 197-283 16-112 (122)
476 3nl4_H Antigen binding fragmen 99.5 3E-13 1E-17 107.0 10.8 133 196-329 6-212 (215)
477 3bqu_C 3H6 FAB light chain; be 99.5 6.6E-15 2.3E-19 118.1 1.1 80 190-269 24-117 (233)
478 2eo1_A OBSCN protein, cDNA FLJ 99.5 1.9E-13 6.6E-18 94.2 8.1 73 1-78 26-99 (102)
479 1op3_H FAB 2G12, heavy chain; 99.5 4.4E-13 1.5E-17 106.8 11.2 73 197-269 8-103 (225)
480 3qib_D 2B4 beta chain; IG doma 99.5 2.3E-13 7.8E-18 111.7 9.7 72 195-267 33-123 (270)
481 2vol_A Murine IGG FC; FC, zinc 99.5 8.1E-14 2.8E-18 109.6 6.6 77 195-271 8-94 (207)
482 2cr6_A KIAA1556 protein, obscu 99.5 4.5E-14 1.5E-18 99.7 4.4 76 1-80 28-105 (115)
483 2rgs_A I, IG gamma-2B heavy ch 99.4 4.9E-14 1.7E-18 111.8 5.1 85 187-271 7-102 (218)
484 2gki_A Nuclease; anti-DNA anti 99.4 1.9E-12 6.6E-17 107.3 14.9 73 196-268 29-124 (291)
485 2xot_A Amphoterin-induced prot 99.4 2.2E-13 7.7E-18 116.5 8.7 94 1-110 261-359 (361)
486 1dee_B IGM RF 2A2; FAB-IBP com 99.4 3.9E-12 1.3E-16 101.2 15.0 72 197-268 8-102 (223)
487 1mq8_A ICAM-1, intercellular a 99.4 2.3E-13 7.9E-18 111.6 7.9 68 199-269 96-166 (291)
488 2fbj_H IGA-kappa J539 FAB (hea 99.4 2.5E-12 8.5E-17 102.0 13.7 126 197-322 8-212 (220)
489 3nfj_J T cell receptor beta ch 99.4 2.3E-12 8E-17 104.0 13.7 75 193-267 5-96 (245)
490 3bae_H WO2 IGG2A FAB fragment 99.4 8.3E-13 2.8E-17 105.4 10.8 73 197-269 8-104 (228)
491 2dm7_A KIAA1556 protein; beta- 99.4 7.8E-13 2.7E-17 92.2 9.1 73 1-79 23-96 (108)
492 2v5y_A Receptor-type tyrosine- 99.4 6.5E-12 2.2E-16 117.7 18.1 78 1-78 179-261 (731)
493 3m45_A Cell adhesion molecule 99.4 1.2E-12 3.9E-17 91.3 9.9 77 1-78 21-107 (108)
494 1z9m_A GAPA225; nectin-like, I 99.4 9.1E-13 3.1E-17 97.1 9.6 79 1-80 53-141 (145)
495 1gsm_A Madcam-1, mucosal addre 99.4 6.8E-12 2.3E-16 97.2 14.9 74 199-278 17-92 (210)
496 2ens_A Advanced glycosylation 99.4 8.8E-14 3E-18 94.8 3.8 68 1-76 25-94 (96)
497 3rbg_A Cytotoxic and regulator 99.4 1.8E-12 6.1E-17 92.7 10.8 88 195-283 7-103 (124)
498 3uto_A Twitchin; kinase, muscl 99.4 1.8E-12 6.3E-17 116.9 13.2 92 188-279 481-572 (573)
499 3so5_A LIG-3, leucine-rich rep 99.4 1.6E-12 5.3E-17 91.2 9.5 75 1-75 25-111 (112)
500 2xqy_G A13-D6.3 monoclonal ant 99.4 3.2E-12 1.1E-16 104.0 12.6 73 196-268 13-108 (261)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=2.2e-43 Score=321.55 Aligned_cols=327 Identities=20% Similarity=0.303 Sum_probs=237.6
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.|.|.|.|+|||||..+... ++.+...++..+|.|.+++.+|+|.|+|.|.|..|...+...|.|....
T Consensus 20 G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~~~ 99 (570)
T 3b43_A 20 GEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERK 99 (570)
T ss_dssp TSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCC
T ss_pred CCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEECCCC
Confidence 789999999999999999999999998754 4556666777899999999999999999999999998888888886543
Q ss_pred cchhh-hhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccce
Q psy12422 80 ESKEQ-QELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKI 156 (356)
Q Consensus 80 ~~~~~-~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (356)
.++.. .........+|+.+.|.|.+. |.|.+.|++++..+....... .. ... ....+........+.+
T Consensus 100 ~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~------~~--~~~-~~~~L~i~~~~~~d~G 170 (570)
T 3b43_A 100 LPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQ------TS--FIH-NVATLQILQTDQSHVG 170 (570)
T ss_dssp CCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEE------EE--EET-TEEEEEESSCCGGGCE
T ss_pred CCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEE------EE--EEC-CEEEEEECcCChHHCE
Confidence 32221 122334457899999999987 677899999876654321110 00 000 0000111112222333
Q ss_pred eeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCce
Q psy12422 157 TRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNIL 236 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~ 236 (356)
.|.|.+.+..+ .......+.+. ....||.+...+....+.+|+.+.|.|.+.|.|+|.++|+|+|..+....++
T Consensus 171 ~Y~C~a~n~~g----~~~~~~~l~v~--~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~ 244 (570)
T 3b43_A 171 QYNCSASNPLG----TASSSAKLTLS--EHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNY 244 (570)
T ss_dssp EEEEEEEETTE----EEEEEEEEEEE--CCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTTSSE
T ss_pred EEEEEEEeCCc----EEEEEEEEEEc--CCCCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCCCcE
Confidence 33333222211 11112222221 1145777877777788999999999999999999999999999999877777
Q ss_pred eEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc---------------------------eeE
Q psy12422 237 DLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL---------------------------DLK 289 (356)
Q Consensus 237 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~---------------------------~~~ 289 (356)
.+........|.|.+++.+|+|.|+|.|.|..|....++.|....+|.+. .+.
T Consensus 245 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~ 324 (570)
T 3b43_A 245 KMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVL 324 (570)
T ss_dssp EEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEE
T ss_pred EEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEE
Confidence 77666777899999999999999999999999998888887733222111 334
Q ss_pred EeC-----------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCCCCCCCC
Q psy12422 290 YKN-----------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAANLGKSPS 342 (356)
Q Consensus 290 ~~~-----------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~ 342 (356)
|.+ ....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|+.+|.+...+.+.
T Consensus 325 W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~ 394 (570)
T 3b43_A 325 WYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPV 394 (570)
T ss_dssp EEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCE
T ss_pred EeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCce
Confidence 432 34679999999999999999999999999999999999999877666543
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=7e-43 Score=318.24 Aligned_cols=311 Identities=21% Similarity=0.311 Sum_probs=230.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.|.|+|.|+|+|+|.++... ++.+...+....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..++
T Consensus 212 G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 291 (570)
T 3b43_A 212 GESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPP 291 (570)
T ss_dssp BSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCC
T ss_pred CCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCC
Confidence 789999999999999999999999999754 4455555666799999999999999999999999999999999887654
Q ss_pred cchhhhhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
.... .......+.+|+.+.|.|.+. |.|.+.|++++..+....... .. .. .....+........+.+.
T Consensus 292 ~~~~-~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~------~~--~~-~~~~~L~i~~v~~~D~G~ 361 (570)
T 3b43_A 292 RFIK-KLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFR------MS--FV-ESVAVLEMYNLSVEDSGD 361 (570)
T ss_dssp EEEE-CCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEE------EE--EE-TTEEEEEEESCCGGGCEE
T ss_pred cccc-cCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEE------EE--EE-CCEEEEEECCCCcccCEE
Confidence 3221 112234578999999999987 788899999887664322110 00 00 000001111122233333
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD 237 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~ 237 (356)
|.|.+.+..+. ......+.+ ..+|.+...+....+.+|+++.|.|.+.|.|+|.+.|+|+|..+....++.
T Consensus 362 Y~C~a~N~~g~----~~~~~~l~V-----~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~ 432 (570)
T 3b43_A 362 YTCEAHNAAGS----ASSSTSLKV-----KEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYK 432 (570)
T ss_dssp EEEEEEBTTBC----CEEEEEECE-----ECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEE
T ss_pred EEEEEEeCCCE----EEEEEEEEe-----cCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEE
Confidence 33333322221 112233444 567888877878889999999999999999999999999999998888877
Q ss_pred EEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc--------------------------eeEEe
Q psy12422 238 LKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL--------------------------DLKYK 291 (356)
Q Consensus 238 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~--------------------------~~~~~ 291 (356)
+..++...+|.|.+++.+|+|.|+|.|.|..|.....+.+....+|.+. .+.|.
T Consensus 433 ~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~ 512 (570)
T 3b43_A 433 IMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWF 512 (570)
T ss_dssp EEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEE
T ss_pred EEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEE
Confidence 7777777899999999999999999999999998887777633322211 23332
Q ss_pred C------------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy12422 292 N------------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 330 (356)
Q Consensus 292 ~------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 330 (356)
+ +...|.|.+++.+|+|.|+|.|.|..|..++.+.|.|.
T Consensus 513 k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 513 KDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp ETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred eCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 2 34689999999999999999999999999999999885
No 3
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=286.11 Aligned_cols=305 Identities=13% Similarity=0.139 Sum_probs=191.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 80 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 80 (356)
|+++.|.|.+.|.|.|.|+|++++..+...........+..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..++.
T Consensus 63 G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 142 (423)
T 3qs7_E 63 SASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLL 142 (423)
T ss_dssp SCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC----
T ss_pred CCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCcc
Confidence 79999999999999999999999988764322222233445799999999999999999999999998889998885432
Q ss_pred chhhhhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCCC---ceEEEEeeccccccccccccCCCccc
Q psy12422 81 SKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDTG---RTTTQMSTLSSNYSSSTNNATSPSKK 155 (356)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (356)
. ....+..+..|+.+.|.|.+. |.|.+.|++++............. ........+.+.|.|.+.+..+..
T Consensus 143 ~---~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~-- 217 (423)
T 3qs7_E 143 Y---TLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRE-- 217 (423)
T ss_dssp ----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEE--
T ss_pred c---cccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCCCc--
Confidence 1 112233456688889999887 888999999776432111100000 000112334555666654432211
Q ss_pred eeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-CCCCeEEEEECCEEccCCC
Q psy12422 156 ITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG-DPEPRVSWTKNGQPLNSSN 234 (356)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p~p~i~W~~~g~~~~~~~ 234 (356)
......+.+ ..+|.+ .+....+.+|+.+.|.|.+.| .|.|.|.|+++|..+....
T Consensus 218 -----------------~~~~~~l~V-----~~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~ 273 (423)
T 3qs7_E 218 -----------------CTRLFTIDL-----NQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGN 273 (423)
T ss_dssp -----------------EEECEEEES-----SSCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGG
T ss_pred -----------------ceeeEEEEE-----ecCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccc
Confidence 112233333 222222 234678999999999999998 6779999999998876543
Q ss_pred ceeE-EE-----eCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCcc-----------------------
Q psy12422 235 ILDL-KY-----KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNI----------------------- 285 (356)
Q Consensus 235 ~~~~-~~-----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~----------------------- 285 (356)
.... .. .....+|.|.+++.+|+|.|+|.|.|. ....+.|.+...+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~ 350 (423)
T 3qs7_E 274 YFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRF 350 (423)
T ss_dssp EEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEE
T ss_pred eeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEE
Confidence 2211 11 111347999999999999999999998 444444432111100
Q ss_pred -----ceeEEeCCeEEE-----------EE--ecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCCC
Q psy12422 286 -----LDLKYKNGVASL-----------QI--QEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAANL 337 (356)
Q Consensus 286 -----~~~~~~~~~~~L-----------~i--~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 337 (356)
..+.|.+++..| .+ ..+..+|+|.|+|.|.|..|..+.++.|.|+++|..+-
T Consensus 351 ~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~ 420 (423)
T 3qs7_E 351 KAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHH 420 (423)
T ss_dssp EEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC---------
T ss_pred EEcCCCeEEEEECCEECCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcccc
Confidence 056666544333 33 66778999999999999999999999999999998664
No 4
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=7e-40 Score=284.38 Aligned_cols=309 Identities=22% Similarity=0.304 Sum_probs=201.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeC-CCCCCeEEEEEEEeCCceeE-EEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDC-KPEDSGEYKCVATNKHGTDE-TNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~-~~~D~G~Y~C~a~n~~g~~~-~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.|+|+|||.++... .......++ .|.|.++ +.+|+|.|+|.|.|..|... ..+.+.+..
T Consensus 23 g~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g--~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~ 100 (384)
T 3kld_A 23 EKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDG--SLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAY 100 (384)
T ss_dssp CSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETT--EEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEE
T ss_pred CCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECC--EEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEec
Confidence 688999999999999999999999999743 333444555 5677665 78999999999999998764 345565544
Q ss_pred cccchhhhhhcccccccCccceeeeccc---CCceeeecccccccCCcccc---CCCCceE--EEEeecccccccccccc
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIR---PAPAIITTRQEIKSSYSSHT---DDTGRTT--TQMSTLSSNYSSSTNNA 149 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~---p~p~i~w~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~ 149 (356)
.+.. .........+.+|+.+.|.|... |.+.+.|++++......... ...+... .....+.|.|.|.+.+.
T Consensus 101 ~~~~-~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 179 (384)
T 3kld_A 101 LENF-KTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNT 179 (384)
T ss_dssp ECCC-SCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEET
T ss_pred cccc-ccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEecc
Confidence 3221 11122334578999999999764 56789999887654322111 0111111 11344556666665543
Q ss_pred CCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCee-cccCCceeecCCCeEEEEEEEcCCCCCeEEEEE-CC
Q psy12422 150 TSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQF-ANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK-NG 227 (356)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g 227 (356)
....... .......+.........+|.+ ...+....+.+|+.+.|.|.+.|+|.|.+.|++ ++
T Consensus 180 ~~~~~~~---------------~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~ 244 (384)
T 3kld_A 180 VTNHKVL---------------GPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADG 244 (384)
T ss_dssp TTTEEEE---------------CCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTC
T ss_pred cccceee---------------CCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCC
Confidence 3211000 000000000000000122333 233456788999999999999999999999999 45
Q ss_pred EEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc---------------------
Q psy12422 228 QPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL--------------------- 286 (356)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~--------------------- 286 (356)
..+..... .......|.|.+++.+|+|.|+|.|.|..|.......+.....|.+.
T Consensus 245 ~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~ 320 (384)
T 3kld_A 245 KPIARKAR----RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKAN 320 (384)
T ss_dssp CCCCTTCE----ECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEE
T ss_pred ccccccce----ecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECC
Confidence 45543221 12223489999999999999999999999988777666522111110
Q ss_pred -----eeEEeC-------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 287 -----DLKYKN-------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 287 -----~~~~~~-------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
.+.|.+ ..+.|.|.++..+|+|.|+|.|.|..|...+++.|.|.+
T Consensus 321 g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 321 GRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp EESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 445543 124799999999999999999999999999999999864
No 5
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-38 Score=277.90 Aligned_cols=309 Identities=21% Similarity=0.303 Sum_probs=207.4
Q ss_pred CCceEEEEEecc-CCCCeeEEeeCCEEcccC--CeeEEecCCeEEEEEeeC-----CCCCCeEEEEEEEeCCcee--EEE
Q psy12422 1 MQNVIKVKVGST-KPPPTVKWYKGNRELSKR--DYSMSYSDGVVSMEIIDC-----KPEDSGEYKCVATNKHGTD--ETN 70 (356)
Q Consensus 1 g~~v~l~C~~~g-~p~~~v~W~k~g~~l~~~--~~~~~~~~~~~~L~i~~~-----~~~D~G~Y~C~a~n~~g~~--~~~ 70 (356)
|++++|.|.+.+ .|.+.|+|+|||..+... .+.....++ .|.|.++ +.+|+|.|+|.+.|..+.. +..
T Consensus 36 G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~--~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~ 113 (403)
T 3laf_A 36 GGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNG--SLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRT 113 (403)
T ss_dssp TCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTS--CEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCC
T ss_pred CCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCC--cEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEE
Confidence 789999999965 688899999999999643 233334455 5777777 6789999999999754333 344
Q ss_pred EEEEEeccccchhhhhhcccccccCccceeeeccc--CCceeeecccccccCCcccc-----CCCCceE--EEEeecccc
Q psy12422 71 CVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHT-----DDTGRTT--TQMSTLSSN 141 (356)
Q Consensus 71 ~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~ 141 (356)
+.+.|..++.. ........+.+|+.+.|.|.+. |.+.+.|++++......... ....... .....+.+.
T Consensus 114 ~~l~v~~p~~~--~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 191 (403)
T 3laf_A 114 AKVMVAGPLRF--LSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGV 191 (403)
T ss_dssp EEEEECCCCEE--CSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEE
T ss_pred EEEEecCCCcc--ccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEE
Confidence 66666653322 2223345678999999999986 77789999987765321110 0001000 012223344
Q ss_pred ccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeE
Q psy12422 142 YSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRV 221 (356)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i 221 (356)
|.|...+.... .........+...+. ...++.+...+....+.+|+.+.|.|.+.|+|.|.+
T Consensus 192 Y~C~~~n~~~~-----------------~~~~~~~l~v~~~p~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~ 253 (403)
T 3laf_A 192 YRCSARNPAST-----------------RTGNEAEVRILSDPG-LHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSF 253 (403)
T ss_dssp EEEEEECSSCC-----------------CBCCCEEEEEECCCC-CCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEE
T ss_pred EEEEEEcCCCc-----------------eeccceeEEEecCCC-cccCceEecCCCceEecCCCcEEEEEEcCCCCCCeE
Confidence 44443222111 011112222222111 011223445566778999999999999999999999
Q ss_pred EEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc---------------
Q psy12422 222 SWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL--------------- 286 (356)
Q Consensus 222 ~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~--------------- 286 (356)
.|++++..+...........+. .|.|.+++.+|+|.|+|.|.|..|.....+.+....++.+.
T Consensus 254 ~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~ 331 (403)
T 3laf_A 254 TWLRGEEVIQLRSKKYSLLGGS--NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIE 331 (403)
T ss_dssp EEEETTEECCCSSSSEEEETTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEE
T ss_pred EEEECCeeccCCCceEEECCcc--EEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEE
Confidence 9999999887654433333333 79999999999999999999999988777776622111110
Q ss_pred -----------eeEEeC--------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecC
Q psy12422 287 -----------DLKYKN--------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTP 333 (356)
Q Consensus 287 -----------~~~~~~--------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 333 (356)
.+.|.. ..+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|+.||
T Consensus 332 l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 332 FECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp ECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred EEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 445543 23569999999999999999999999999999999999875
No 6
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=2.6e-38 Score=276.67 Aligned_cols=310 Identities=20% Similarity=0.314 Sum_probs=209.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC---CeeEEecCCeEEEEEe----eCCCCCCeEEEEEEEeCCceeE-EEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR---DYSMSYSDGVVSMEII----DCKPEDSGEYKCVATNKHGTDE-TNCV 72 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~---~~~~~~~~~~~~L~i~----~~~~~D~G~Y~C~a~n~~g~~~-~~~~ 72 (356)
|+++.|.|.+.|.|.+.|+|+|||..+... +......++ +|.|. +++.+|+|.|+|.|.|..|... ..+.
T Consensus 32 G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~--~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~ 109 (404)
T 3p3y_A 32 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSG--TLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIR 109 (404)
T ss_dssp SSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSC--CCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEE
T ss_pred CCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCc--eEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEE
Confidence 789999999999999999999999988532 222222334 45553 7889999999999999988874 5678
Q ss_pred EEEeccccchhhhhhcccccccCccceeeecc-c--CCceeeecccccccCCcccc---CCCCceEE--EEeec-ccccc
Q psy12422 73 VIVESEEESKEQQELAHNFLYSGDRKYIEKHI-R--PAPAIITTRQEIKSSYSSHT---DDTGRTTT--QMSTL-SSNYS 143 (356)
Q Consensus 73 l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~-~--p~p~i~w~~~~~~~~~~~~~---~~~~~~~~--~~~~~-~~~~~ 143 (356)
|.|...+..+. .......+.+|+.+.|.|.+ . |.+.+.|++++......... ...+.... ....+ .+.|.
T Consensus 110 l~V~~~p~~~~-~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~ 188 (404)
T 3p3y_A 110 LQVSKSPLWPK-ENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYS 188 (404)
T ss_dssp EEECCCCCCCC-CCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBE
T ss_pred EEEeccCcccc-CCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceE
Confidence 88876654332 22234567899999999987 3 77889999986443221111 01111111 12223 25566
Q ss_pred ccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccC---CceeecCCCeEEEEEEEcCCCCCe
Q psy12422 144 SSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL---TDKTIDDGQCLDLSAVVKGDPEPR 220 (356)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~v~~g~~~~l~C~~~g~p~p~ 220 (356)
|...+...... .........+.........+|.+.... ....+.+|+.+.|.|.+.|+|.|.
T Consensus 189 C~a~n~~~~~~---------------~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~ 253 (404)
T 3p3y_A 189 CNARFHFTHTI---------------QQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPD 253 (404)
T ss_dssp EEEECTTTCCE---------------EECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCE
T ss_pred EEEEeccccce---------------eccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCc
Confidence 55533222110 001112222222222223444444332 356789999999999999999999
Q ss_pred EEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc--------------
Q psy12422 221 VSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL-------------- 286 (356)
Q Consensus 221 i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~-------------- 286 (356)
+.|+++|..+..... ... .....|.|.+++.+|+|.|+|.|.|..|.....+.|.+..+|.+.
T Consensus 254 v~W~~~~~~~~~~~~-~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~ 330 (404)
T 3p3y_A 254 IAWYKKGGDLPSDKA-KFE--NFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDG 330 (404)
T ss_dssp EEEEETTBCCCTTTE-EEE--GGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCE
T ss_pred EEEEECCEECCCCcc-ccc--ccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcE
Confidence 999999988875543 222 223489999999999999999999999988877777632211110
Q ss_pred ------------eeEEeC----------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 287 ------------DLKYKN----------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 287 ------------~~~~~~----------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
.+.|.. .+..|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 331 ~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 331 RLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 345543 124799999999999999999999999999999998864
No 7
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=278.61 Aligned_cols=306 Identities=13% Similarity=0.122 Sum_probs=198.4
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 80 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 80 (356)
|++++|.|.+.+.|...+.|++++..+...........+..+|.|.+++.+|+|.|+|.|.|..+.....+.|.|...
T Consensus 63 g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~~~-- 140 (527)
T 3qs9_E 63 SASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNT-- 140 (527)
T ss_dssp SCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC----
T ss_pred cccEEEEEEEecCCceeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEECCc--
Confidence 789999999998888999999999987644322233345568999999999999999999999888877777777622
Q ss_pred chhhhhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCCC---ceEEEEeeccccccccccccCCCccc
Q psy12422 81 SKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDTG---RTTTQMSTLSSNYSSSTNNATSPSKK 155 (356)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (356)
+......+.....|+.+.|.|.+. |.|.+.|++++............. ........+.+.|.|.+.+..+..
T Consensus 141 -~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~-- 217 (527)
T 3qs9_E 141 -LLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRE-- 217 (527)
T ss_dssp ----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEE--
T ss_pred -eeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEEEEEEeCCCcc--
Confidence 111112222345677888999887 889999998765542111000000 001112334556666654332211
Q ss_pred eeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEc-CCCCCeEEEEECCEEccCCC
Q psy12422 156 ITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVK-GDPEPRVSWTKNGQPLNSSN 234 (356)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~~g~~~~~~~ 234 (356)
......+.+ ..+|.+ .+....+.+|+.+.|.|.+. |.|.|.|+|+++|..+....
T Consensus 218 -----------------~~~~~~l~V-----~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~ 273 (527)
T 3qs9_E 218 -----------------CTRLFTIDL-----NQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGN 273 (527)
T ss_dssp -----------------EEECEEEES-----SSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGG
T ss_pred -----------------cceEEEEEE-----eccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCc
Confidence 111233444 223333 34567899999999999996 99999999999998876543
Q ss_pred ceeE-EEe-----CCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCc---------cc-------------
Q psy12422 235 ILDL-KYK-----NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSN---------IL------------- 286 (356)
Q Consensus 235 ~~~~-~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~---------~~------------- 286 (356)
.... ... ....+|.|.+++.+|+|.|+|.|.|. ....+.|.+...+. +.
T Consensus 274 ~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~ 350 (527)
T 3qs9_E 274 YFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRF 350 (527)
T ss_dssp EEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEE
T ss_pred eeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEE
Confidence 3221 111 12346999999999999999999998 44444444211110 00
Q ss_pred ------eeEEeC-------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCCCC
Q psy12422 287 ------DLKYKN-------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAANLG 338 (356)
Q Consensus 287 ------~~~~~~-------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~ 338 (356)
.+.|.+ ....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|+++|.+...
T Consensus 351 ~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~ 421 (527)
T 3qs9_E 351 KAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAE 421 (527)
T ss_dssp EEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEEC
T ss_pred EecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEe
Confidence 445543 2347999999999999999999999999999999999999977543
No 8
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.2e-37 Score=271.74 Aligned_cols=314 Identities=18% Similarity=0.236 Sum_probs=206.3
Q ss_pred CCceEEEEEecc-CCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEE-EEEEEEecc
Q psy12422 1 MQNVIKVKVGST-KPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET-NCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g-~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~-~~~l~v~~~ 78 (356)
|++++|.|.+.+ .|.+.|+|+|+|..+..............+|.|.+++.+|+|.|+|.|.|..|...+ .+.|.|...
T Consensus 21 G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~ 100 (395)
T 1bih_A 21 NNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYL 100 (395)
T ss_dssp TSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEe
Confidence 789999999988 899999999999998754322223333347999999999999999999999887653 355655543
Q ss_pred ccchhhhhhcccccccCccceeeecc-c--CCceeeecccccccCCcc---------ccCCCCc--eEEEEeeccc---c
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHI-R--PAPAIITTRQEIKSSYSS---------HTDDTGR--TTTQMSTLSS---N 141 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~-~--p~p~i~w~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~---~ 141 (356)
+.+.. ......+.+|+.+.|.|.+ . |.+.+.|++++....... .....+. .......+.+ .
T Consensus 101 ~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~ 178 (395)
T 1bih_A 101 IASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYK 178 (395)
T ss_dssp ECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEE
T ss_pred ecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceE
Confidence 22211 2234567799999999996 3 888999999862111100 0011111 1112334456 6
Q ss_pred ccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeE
Q psy12422 142 YSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRV 221 (356)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i 221 (356)
|.|.+.+............... .............+|.+ .+....+.+|+.+.|.|.+.|+|.|.+
T Consensus 179 Y~C~a~n~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i 244 (395)
T 1bih_A 179 YVCTAKNAAVDEEVVLVEYEIK------------GVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGYP 244 (395)
T ss_dssp EEEEEECTTCSSCEEEEEEEEC------------CCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEEECSSCCCC
T ss_pred EEEEEEecccceEEEeeeEEec------------ccccccccccCCcCcee--cCCceEEECCCcEEEEEEeccCCCCeE
Confidence 7777655443321111000000 00000000000123333 345678999999999999999999999
Q ss_pred EEEECCEEccCCCceeEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCCceEE-EEEEecCCCC-------c-cc----
Q psy12422 222 SWTKNGQPLNSSNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLTPLNSS-------N-IL---- 286 (356)
Q Consensus 222 ~W~~~g~~~~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~p~~~~-------~-~~---- 286 (356)
.|+++|..+.......+.. ......|.|.+++.+|+|.|+|.|.|..|.... .+.|....+| . ..
T Consensus 245 ~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g 324 (395)
T 1bih_A 245 NYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQG 324 (395)
T ss_dssp EEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTT
T ss_pred EEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCC
Confidence 9999999887543322221 122237999999999999999999999998655 5555421111 0 00
Q ss_pred ---------------eeEEeCC------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy12422 287 ---------------DLKYKNG------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 330 (356)
Q Consensus 287 ---------------~~~~~~~------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 330 (356)
.+.|..+ ...|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 325 ~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 395 (395)
T 1bih_A 325 QDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQVN 395 (395)
T ss_dssp SCEEEECEEEEESCCCCEEEETTEECCSSSEEEETTEEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CeEEEEEEECcccCCeeEEEECCEECCCCceEEECCEEEEeeCCcccCEEEEEEEEccCCCceEEEEEEEC
Confidence 3444331 1379999999999999999999999999999998873
No 9
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=3.3e-38 Score=273.94 Aligned_cols=307 Identities=24% Similarity=0.307 Sum_probs=205.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCC-CCCeEEEEEEEeCCceeEE-EEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKP-EDSGEYKCVATNKHGTDET-NCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~n~~g~~~~-~~~l~v~~ 77 (356)
|++++|.|.+.|.|.+.|+|+|||..+... .......++ .|.|.++.. +|+|.|+|.|.|..|...+ .+.|.|..
T Consensus 22 g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~--~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~ 99 (382)
T 1cs6_A 22 EEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAG--DLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGF 99 (382)
T ss_dssp CCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETT--EEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEE
T ss_pred CCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCC--eEEEecccccccCEEEEEEEEcCCcEEEecceEEEeec
Confidence 789999999999999999999999998743 222334455 799999987 9999999999999887643 46666665
Q ss_pred cccchhhhhhcccccccCccceeeeccc---CCceeeecccccccCCcccc----CCC-CceE--EEEeecccccccccc
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIR---PAPAIITTRQEIKSSYSSHT----DDT-GRTT--TQMSTLSSNYSSSTN 147 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~---p~p~i~w~~~~~~~~~~~~~----~~~-~~~~--~~~~~~~~~~~~~~~ 147 (356)
.+... ........+.+|+.+.|.|.+. |.+.+.|++++......... ... .... .....+.|.|.|...
T Consensus 100 ~~~~~-~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 178 (382)
T 1cs6_A 100 LQEFS-AEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFAT 178 (382)
T ss_dssp ECCCC-SSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEE
T ss_pred ccccc-ccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEE
Confidence 43222 1223445678999999999854 77889999987654211100 000 0000 012233344554443
Q ss_pred ccCCCccceeeeeeccccCCCCCcccccceeeecCC-CCCCCCCeecc-cCCceeecCCCeEEEEEEEcCCCCCeEEEEE
Q psy12422 148 NATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPP-DTAMTPPQFAN-KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK 225 (356)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~-~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~ 225 (356)
+....... ...+....+.+.. .....+|.+.. .+....+.+|+.+.|.|.+.|+|.|.+.|++
T Consensus 179 n~~g~~~~---------------~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~ 243 (382)
T 1cs6_A 179 SHIDFITK---------------SVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRK 243 (382)
T ss_dssp EEETTEEE---------------EEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEE
T ss_pred Eccccccc---------------eeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEE
Confidence 22211000 0001112222111 01122454443 3467789999999999999999999999999
Q ss_pred CCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc-------------------
Q psy12422 226 NGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL------------------- 286 (356)
Q Consensus 226 ~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~------------------- 286 (356)
++..+... .......|.|.+++.+|+|.|+|.|.|..|.....+.+....+|.+.
T Consensus 244 ~~~~~~~~------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~ 317 (382)
T 1cs6_A 244 LDGSQTSK------WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCV 317 (382)
T ss_dssp CCSCCSCC------CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECE
T ss_pred CCcccccE------EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEE
Confidence 88765431 11223489999999999999999999999988777666622111110
Q ss_pred -------eeEEeCC-------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 287 -------DLKYKNG-------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 287 -------~~~~~~~-------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
.+.|..+ .+.|.|.+++.+|+|.|+|.|.|..|..++.+.|.|++
T Consensus 318 ~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~a 382 (382)
T 1cs6_A 318 ASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 382 (382)
T ss_dssp EEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEeC
Confidence 4455431 24799999999999999999999999999999999874
No 10
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=2.8e-36 Score=279.06 Aligned_cols=311 Identities=18% Similarity=0.201 Sum_probs=207.4
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEE--EEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET--NCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~--~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.|.|+|+|||..+... ..|.|.+++.+|+|.|+|.|.|..|.... .+.|.|...
T Consensus 218 G~~~~l~C~~~g~p~~~i~W~~~g~~i~~~----------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~ 287 (642)
T 1e07_A 218 GENLNLSCHAASNPPAQYSWFVNGTFQQST----------QELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAE 287 (642)
T ss_pred CCEEEEEEEcCCCCCcEEEEEECCeEcccC----------CceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEcc
Confidence 789999999999999999999999988432 26999999999999999999999886654 455666554
Q ss_pred ccchhhhhhcccccccCccceeeeccc-CCceeeecccccccCCccccC--CCCceE---EEEeeccccccccccccCCC
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIR-PAPAIITTRQEIKSSYSSHTD--DTGRTT---TQMSTLSSNYSSSTNNATSP 152 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~-p~p~i~w~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~ 152 (356)
+..+.........+..|+.+.|.|.+. .++.+.|++++..+....... ...... .....+.+.|.|.+.+...
T Consensus 288 ~~~p~i~~~~~~~~~~g~~v~l~C~~~~~p~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g- 366 (642)
T 1e07_A 288 PPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELS- 366 (642)
T ss_pred CCCCEEEcCCceeEecCCcEEEEEECCCCCccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCC-
Confidence 333322222334455678899999998 335799999876653321110 001111 1122334445544433221
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccC
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNS 232 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~ 232 (356)
...+....+.+. ..|+.....+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+..
T Consensus 367 ------------------~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~ 424 (642)
T 1e07_A 367 ------------------VDHSDPVILNVL----YGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQH 424 (642)
T ss_pred ------------------CcceeeEEEEEE----cCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCC
Confidence 111222333331 1222223345567889999999999999999999999999988754
Q ss_pred CCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEE--EEecC---CCCccc---------------------
Q psy12422 233 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKC--KLTPL---NSSNIL--------------------- 286 (356)
Q Consensus 233 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~--~l~p~---~~~~~~--------------------- 286 (356)
. ..|.|.+++.+|+|.|+|.|.|..|....+. .+... ..+.+.
T Consensus 425 ~-----------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~ 493 (642)
T 1e07_A 425 T-----------QELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEA 493 (642)
T ss_pred C-----------ceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCC
Confidence 2 2699999999999999999999998765432 22211 111110
Q ss_pred ---eeEEeC---------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEE-EEEEEEEecCCCCCCCCCCcccCC
Q psy12422 287 ---DLKYKN---------------GVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLTVRSTPAANLGKSPSKESDK 347 (356)
Q Consensus 287 ---~~~~~~---------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~~~~~~~~~~~~~~ 347 (356)
.+.|.. ++..|.|.+++.+|+|.|+|.|.|..|.... .+.|.|..+|..+...++......
T Consensus 494 ~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~ 573 (642)
T 1e07_A 494 QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLS 573 (642)
T ss_pred CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEc
Confidence 334432 3468999999999999999999999998655 799999988765544433333333
Q ss_pred CCceeEee
Q psy12422 348 APRFFAIV 355 (356)
Q Consensus 348 ~~~~~~~~ 355 (356)
+....+.|
T Consensus 574 g~~~~l~C 581 (642)
T 1e07_A 574 GANLNLSC 581 (642)
T ss_pred CCcEEEEE
Confidence 44444443
No 11
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=2.9e-35 Score=244.95 Aligned_cols=220 Identities=22% Similarity=0.420 Sum_probs=181.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|++++|.|.+.|.|.+.|+|+|+|..+... ++.....++...|.|.+++.+|+|.|+|.+.|..|..+..+.|.|..++
T Consensus 20 G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p 99 (284)
T 2rik_A 20 GESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPP 99 (284)
T ss_dssp TCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCC
Confidence 789999999999999999999999999754 4555556667799999999999999999999999988888888775431
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
T Consensus 100 -------------------------------------------------------------------------------- 99 (284)
T 2rik_A 100 -------------------------------------------------------------------------------- 99 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecc-cCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeE
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFAN-KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~ 238 (356)
.+.. ......+.+|+.+.|.|.+.|+|.+.+.|+++|..+........
T Consensus 100 -------------------------------~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~ 148 (284)
T 2rik_A 100 -------------------------------RFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRM 148 (284)
T ss_dssp -------------------------------EEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEE
T ss_pred -------------------------------cccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEE
Confidence 1111 11234578899999999999999999999999999988877777
Q ss_pred EEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc--------------------------eeEEeC
Q psy12422 239 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL--------------------------DLKYKN 292 (356)
Q Consensus 239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~--------------------------~~~~~~ 292 (356)
........|.|.+++.+|+|.|+|.|.|..|.....+.+....+|.+. .+.|..
T Consensus 149 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~ 228 (284)
T 2rik_A 149 SFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHK 228 (284)
T ss_dssp EEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEE
T ss_pred EEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEE
Confidence 777778899999999999999999999999988887777733222211 344432
Q ss_pred -----------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 293 -----------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 293 -----------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 284 (284)
T 2rik_A 229 DKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284 (284)
T ss_dssp TTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEECC
T ss_pred CCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEcC
Confidence 235899999999999999999999999999999999863
No 12
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=1.7e-36 Score=263.81 Aligned_cols=305 Identities=19% Similarity=0.295 Sum_probs=200.1
Q ss_pred CCceEEEEEeccCCCCeeEEee-CCEEcccC-CeeEEecCCeEEEEEeeCCCCC------CeEEEEEEEeCCceeE-EEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYK-GNRELSKR-DYSMSYSDGVVSMEIIDCKPED------SGEYKCVATNKHGTDE-TNC 71 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k-~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D------~G~Y~C~a~n~~g~~~-~~~ 71 (356)
|++++|.|.+.|.|.|.|+|+| ||.++... .+.....++ +|.|.+++.+| +|.|+|.|.|..|... ..+
T Consensus 19 G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~ 96 (388)
T 2v5m_A 19 STGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDV 96 (388)
T ss_dssp TTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCE
T ss_pred CccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCc--eEEecccChhhccccccCceEEEEEEccCCeEEecce
Confidence 7889999999999999999999 88888643 233344555 79999999987 9999999999988753 456
Q ss_pred EEEEeccccchhhhhhcccccccCccceeeecccC-----CceeeecccccccCCccccCC-------CCceEE--EEee
Q psy12422 72 VVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRP-----APAIITTRQEIKSSYSSHTDD-------TGRTTT--QMST 137 (356)
Q Consensus 72 ~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p-----~p~i~w~~~~~~~~~~~~~~~-------~~~~~~--~~~~ 137 (356)
.|.+...+... .......+.+|+.+.|.|.+.. .+.+.|++++........... ...... ....
T Consensus 97 ~v~v~~~p~~~--~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 174 (388)
T 2v5m_A 97 HVRAVVAQYYE--ADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPE 174 (388)
T ss_dssp EEEEECCCCCC--CBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGG
T ss_pred EEEEccccccc--cCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCcc
Confidence 66665443222 1233456789999999999872 267999998765432111000 011000 1222
Q ss_pred cc-ccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeec-ccCCceeecCCCeEEEEEEEcC
Q psy12422 138 LS-SNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFA-NKLTDKTIDDGQCLDLSAVVKG 215 (356)
Q Consensus 138 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~~~l~C~~~g 215 (356)
+. +.|.|...+.. ............+.+.......+|.+. .......+.+|+.+.|.|.+.|
T Consensus 175 d~~G~Y~C~~~n~~----------------~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g 238 (388)
T 2v5m_A 175 DGYKSYQCRTKHRL----------------TGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQG 238 (388)
T ss_dssp GGGCCEEEEEEETT----------------TCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEE
T ss_pred ccCeeEEEEeccCC----------------CCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCC
Confidence 23 44555443221 111111111112222111001112211 1223456889999999999999
Q ss_pred CCCCeEEEEECCEEcc------CCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc---
Q psy12422 216 DPEPRVSWTKNGQPLN------SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL--- 286 (356)
Q Consensus 216 ~p~p~i~W~~~g~~~~------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~--- 286 (356)
+|.|.+.|++++..+. ...++ ....+ .|.|.+++.+|+|.|+|.|.|..|.....+.|.+..++.+.
T Consensus 239 ~p~p~v~W~~~~~~~~~~~~~~~~~~~--~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~ 314 (388)
T 2v5m_A 239 FPAPSFRWYKFIEGTTRKQAVVLNDRV--KQVSG--TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDP 314 (388)
T ss_dssp ESCCEEEEEEECTTSSCEEECCCSSSE--EEETT--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEES
T ss_pred CCCCEEEEEecCCCCcccccccccCce--ecccC--EEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCC
Confidence 9999999999753322 22222 22233 89999999999999999999999988777666622111110
Q ss_pred -----------------------eeEEeC-------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12422 287 -----------------------DLKYKN-------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 329 (356)
Q Consensus 287 -----------------------~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 329 (356)
.+.|.. ..+.|.|.+++.+|+|.|+|.|.|..|..++++.|.|
T Consensus 315 ~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 315 PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp SEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CcEEecCCCCEEEEEEeccccCCeEEEEECCEECccCCCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 455543 3468999999999999999999999999999999876
No 13
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=9.3e-36 Score=269.10 Aligned_cols=303 Identities=14% Similarity=0.148 Sum_probs=209.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 80 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 80 (356)
|++++|.|.+.+ .|+|+|+|.++. .. ....+|+|.+++.+|+|.|+|.+.| |. +..+.|.|.+++.
T Consensus 51 G~~v~l~C~~~~----~v~W~~~~~~~~-----~~--~~~~~L~I~~~~~~D~G~Y~C~a~n--g~-~~~~~l~V~~p~~ 116 (524)
T 2ec8_A 51 GDEIRLLCTDPG----FVKWTFEILDET-----NE--NKQNEWITEKAEATNTGKYTCTNKH--GL-SNSIYVFVRDPAK 116 (524)
T ss_dssp TSCEEEEEECTT----EEEEEEESSSCC-----EE--ECSSEEEESSCCSTTCEEEEEEETT--SC-EEEEEEECCCSSC
T ss_pred CCeEEEEEeCCc----eEEEcCCCcccc-----cc--CccceEEEcccchhhCEEEEEeecC--Cc-ceEEEEEECCCCc
Confidence 789999999976 899999998772 11 2234899999999999999999999 53 6777888876544
Q ss_pred chhhhhhcccccccCccceeeeccc--CCceeeecc-cccccCCcccc--CCCCceE--EEEeeccc-cccccccccCCC
Q psy12422 81 SKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTR-QEIKSSYSSHT--DDTGRTT--TQMSTLSS-NYSSSTNNATSP 152 (356)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~-~~~~~~~~~~~--~~~~~~~--~~~~~~~~-~~~~~~~~~~~~ 152 (356)
.. .......+.+|+.+.|.|.+. +.+.+.|++ ++..+...... ....... .....+.+ .|.|.+.+..
T Consensus 117 ~~--~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~-- 192 (524)
T 2ec8_A 117 LF--LVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEG-- 192 (524)
T ss_dssp SB--CCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC-----
T ss_pred cc--ccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECC--
Confidence 33 334456678999999999998 336799988 44333221111 0011100 01223334 4555443211
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCe-EEEEECCEEc-
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPR-VSWTKNGQPL- 230 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-i~W~~~g~~~- 230 (356)
....+....+.+.. ....+|.+...+....+.+|+.+.|.|.+.|.|.|. +.|++++..+
T Consensus 193 -----------------~~~~s~~~~l~V~~-~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~ 254 (524)
T 2ec8_A 193 -----------------KSVLSEKFILKVRP-AFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTK 254 (524)
T ss_dssp ------------------CCCCCCEECCEEC-CCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCC
T ss_pred -----------------ceEEEEEEEEEEEe-CCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCc
Confidence 11111122232211 114678888888788999999999999999999887 9999999873
Q ss_pred -cCCCceeEE---EeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc--------------------
Q psy12422 231 -NSSNILDLK---YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL-------------------- 286 (356)
Q Consensus 231 -~~~~~~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~-------------------- 286 (356)
.......+. .......|.|.+++.+|+|.|+|.|.|..|.....+.|.+...+.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~ 334 (524)
T 2ec8_A 255 LQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLI 334 (524)
T ss_dssp CCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEE
T ss_pred cccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEE
Confidence 322221111 11224689999999999999999999999988877776632211110
Q ss_pred ---------e-eEEeCC----------------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCC
Q psy12422 287 ---------D-LKYKNG----------------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPA 334 (356)
Q Consensus 287 ---------~-~~~~~~----------------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 334 (356)
. +.|..+ ...|.|.+++.+|+|.|+|.|.|..|..+..+.|.|+.+|.
T Consensus 335 C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~ 414 (524)
T 2ec8_A 335 VEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPE 414 (524)
T ss_dssp EEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEE
T ss_pred EEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCe
Confidence 3 666541 35899999999999999999999999999999999999988
Q ss_pred CCCCC
Q psy12422 335 ANLGK 339 (356)
Q Consensus 335 ~~~~~ 339 (356)
+...+
T Consensus 415 i~~~~ 419 (524)
T 2ec8_A 415 ILTYD 419 (524)
T ss_dssp EEEEE
T ss_pred Eeecc
Confidence 75543
No 14
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=2.5e-35 Score=279.86 Aligned_cols=325 Identities=21% Similarity=0.316 Sum_probs=227.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcc------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELS------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVI 74 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 74 (356)
|+++.|.|.+.|.|.|.|+|+|++.... ... .....++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 263 g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~-~~~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 339 (816)
T 3dmk_A 263 SSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLND-RVKQVSG--TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLT 339 (816)
T ss_dssp TSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSS-SEEEETT--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCC-ceEeccc--eEEECCCCHhHCEEEEEEEEcCCCceEEEEEEE
Confidence 7899999999999999999999543221 111 1222233 899999999999999999999999988888888
Q ss_pred EeccccchhhhhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCC
Q psy12422 75 VESEEESKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSP 152 (356)
Q Consensus 75 v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (356)
|..++... .......+.+|+.+.|.|.+. |.+.+.|++++..+..... ..........+.+.|.|.+.+...
T Consensus 340 V~~~~~~~--~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~~g- 413 (816)
T 3dmk_A 340 VTAPLSAK--IDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES---VLRIESVKKEDKGMYQCFVRNDRE- 413 (816)
T ss_dssp ECEEEEEE--EESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSS---EEEESSCCGGGCEEEEEEEECSSC-
T ss_pred EcCCCcee--eCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCC---EEEEcCCCHHHCEEEEEEEECCCC-
Confidence 87643221 223345678999999999987 7888999998766532210 000011123334555554432211
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccC
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNS 232 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~ 232 (356)
.......+.+. ....+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+..
T Consensus 414 -------------------~~~~~~~l~v~--~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~ 472 (816)
T 3dmk_A 414 -------------------SAEASAELKLG--GRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIAN 472 (816)
T ss_dssp -------------------EEEECCEEECC--CSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCS
T ss_pred -------------------cEEEEEEEEEc--cccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCC
Confidence 11122233332 225678887777778899999999999999999999999999999987
Q ss_pred CCceeEEE----e-CCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc---------------------
Q psy12422 233 SNILDLKY----K-NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL--------------------- 286 (356)
Q Consensus 233 ~~~~~~~~----~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~--------------------- 286 (356)
...+.... . .....|.|.+++.+|+|.|+|.|.|..|....++.+.+...+.+.
T Consensus 473 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g 552 (816)
T 3dmk_A 473 NDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAG 552 (816)
T ss_dssp CTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEEC
T ss_pred CCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecC
Confidence 66554321 1 123579999999999999999999999998888877743332211
Q ss_pred ----eeEEeC--------------CeEEEEEecCC-CCCCeEEEEEEEcCCcce-EEEEEEEEEecCCCCCCCCCCcccC
Q psy12422 287 ----DLKYKN--------------GVASLQIQEVF-PEDEGVYVCTATNSLGTA-ETKCKLTVRSTPAANLGKSPSKESD 346 (356)
Q Consensus 287 ----~~~~~~--------------~~~~L~i~~v~-~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~ 346 (356)
.+.|.+ .++.|.|.++. .+|+|.|+|.|.|..|.. ...+.|.|..+|.+.....+.....
T Consensus 553 ~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~ 632 (816)
T 3dmk_A 553 YPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQ 632 (816)
T ss_dssp SSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEE
T ss_pred CCCCEEEEEECCeEcccCCceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccC
Confidence 345543 24579999998 689999999999999964 4588999999988766554444444
Q ss_pred CCCceeEee
Q psy12422 347 KAPRFFAIV 355 (356)
Q Consensus 347 ~~~~~~~~~ 355 (356)
.+....+.|
T Consensus 633 ~G~~v~L~C 641 (816)
T 3dmk_A 633 VGQYLTLHC 641 (816)
T ss_dssp SSCEEEEEE
T ss_pred CCCeEEEEE
Confidence 444444443
No 15
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=2.3e-35 Score=280.05 Aligned_cols=307 Identities=20% Similarity=0.344 Sum_probs=215.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC-eeEE---ec--CCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD-YSMS---YS--DGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVI 74 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-~~~~---~~--~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 74 (356)
|+++.|.|.+.|.|.|.|+|+|+|..+.... +... .. +....|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 444 G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 523 (816)
T 3dmk_A 444 GPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLN 523 (816)
T ss_dssp SSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEE
Confidence 7899999999999999999999999997543 2221 12 2335799999999999999999999999999999999
Q ss_pred EeccccchhhhhhcccccccCccceeeeccc--CCceeeecccccccCCccccC--CCCceEEE--E-eecccccccccc
Q psy12422 75 VESEEESKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTD--DTGRTTTQ--M-STLSSNYSSSTN 147 (356)
Q Consensus 75 v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~--~~~~~~~~--~-~~~~~~~~~~~~ 147 (356)
|...+.. .......+.+|+.+.|.|.+. |.+.+.|++++..+....... ..+..... . ..+.+.|.|.+.
T Consensus 524 V~~~p~~---~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~ 600 (816)
T 3dmk_A 524 VYGLPYI---RQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAK 600 (816)
T ss_dssp ECSSCEE---CCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCHHHHCEEEEEEEE
T ss_pred EecCCee---EccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecCccccCEEEEEEEE
Confidence 9876432 223345678999999999987 667799999887664332111 11111111 1 133455555543
Q ss_pred ccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeec-ccCCceeecCCCeEEEEEEEcCCCCC-eEEEEE
Q psy12422 148 NATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFA-NKLTDKTIDDGQCLDLSAVVKGDPEP-RVSWTK 225 (356)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~~~l~C~~~g~p~p-~i~W~~ 225 (356)
+..+ ........+.+ ..+|.+. .......+.+|+.+.|.|.+.+.|+| .+.|++
T Consensus 601 n~~g-------------------~~~~~~~~v~v-----~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~ 656 (816)
T 3dmk_A 601 NQEG-------------------YSARGSLEVQV-----MVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTL 656 (816)
T ss_dssp ESSS-------------------CEEEEEEEEEE-----ECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEE
T ss_pred ECCC-------------------ceeeeeEEEEE-----ecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEE
Confidence 3321 11122233333 2223222 22345568899999999999876655 899999
Q ss_pred CCEEccCCCceeEE-EeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc------------------
Q psy12422 226 NGQPLNSSNILDLK-YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL------------------ 286 (356)
Q Consensus 226 ~g~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~------------------ 286 (356)
+|..+......... .....+.|.|.+++.+|+|.|+|.|.|..|....++.|.+..+|.+.
T Consensus 657 ~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C 736 (816)
T 3dmk_A 657 DGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVEC 736 (816)
T ss_dssp TTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEEC
T ss_pred CCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEE
Confidence 99988765544433 33456789999999999999999999999998887777632222111
Q ss_pred --------eeEEeC--------------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCC
Q psy12422 287 --------DLKYKN--------------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPA 334 (356)
Q Consensus 287 --------~~~~~~--------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 334 (356)
.+.|.. .++.|.|.+++.+|+|.|+|.|.|..|.+...+.+..+..+.
T Consensus 737 ~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~~~~~~~~ 812 (816)
T 3dmk_A 737 KADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAHH 812 (816)
T ss_dssp EEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEEEEEEC--
T ss_pred EEecCCCCeEEEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEEEEeeccc
Confidence 344432 124799999999999999999999999999988877766554
No 16
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=7.4e-35 Score=269.56 Aligned_cols=300 Identities=18% Similarity=0.267 Sum_probs=209.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC-eeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeE-EEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD-YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE-TNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~-~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.| +.++|+|||+.+.... +.+...+ ..|.|.+++.+|+|.|+|.|.|..|... ..+.|.|...
T Consensus 304 g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 380 (642)
T 1e07_A 304 EDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDN--RTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYG 380 (642)
T ss_pred CCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCC--CEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcC
Confidence 56799999999886 7999999999987543 2222222 3899999999999999999999988753 4578888765
Q ss_pred ccchhhhhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccce
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKI 156 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (356)
+..+.. ......+.+|+.+.|.|.+. |.|.+.|++++..+.... ..........+.+.|.|.+.+..+..
T Consensus 381 p~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~~--- 452 (642)
T 1e07_A 381 PDDPTI-SPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQ----ELFISNITEKNSGLYTCQANNSASGH--- 452 (642)
T ss_pred CCCCee-cCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCCc----eEEEccCChhhCeEEEEEEEcCCCCC---
Confidence 443322 22344678999999999986 788899999876543211 00111112344555666654433211
Q ss_pred eeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCce
Q psy12422 157 TRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNIL 236 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~ 236 (356)
. .+....+.+.. ...+|.+.. .....+.+|+.+.|.|.+.+ |.+.+.|+++|..+....++
T Consensus 453 -------------~--~s~~~~v~v~~--~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~ 513 (642)
T 1e07_A 453 -------------S--RTTVKTITVSA--ELPKPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRL 513 (642)
T ss_pred -------------c--ccceEEEEEec--cCCCceEec-CCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcE
Confidence 1 11222333311 123455543 34567889999999999994 88999999999999877665
Q ss_pred eEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEE-EEEEecCCCC--------ccc-------------------ee
Q psy12422 237 DLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLTPLNSS--------NIL-------------------DL 288 (356)
Q Consensus 237 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~p~~~~--------~~~-------------------~~ 288 (356)
.+..+ ...|.|.+++.+|+|.|+|.|.|..|.... .+.|.....| ... .+
T Consensus 514 ~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v 591 (642)
T 1e07_A 514 QLSNG--NRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQY 591 (642)
T ss_pred EEcCC--CcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeE
Confidence 54433 358999999999999999999999997533 3344311100 000 55
Q ss_pred EEeCC------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy12422 289 KYKNG------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRST 332 (356)
Q Consensus 289 ~~~~~------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 332 (356)
.|.++ ...|.|.+++.+|+|.|+|.|.|..|..+.++.|.|...
T Consensus 592 ~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~v~ 641 (642)
T 1e07_A 592 SWRINGIPQQHTQVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSITVS 641 (642)
T ss_pred EEEECCEECccCceEEECcccccCCeEEEEEEEecccCcceeEEEEEEEc
Confidence 66543 357999999999999999999999999999998888753
No 17
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=8.5e-36 Score=267.40 Aligned_cols=305 Identities=17% Similarity=0.127 Sum_probs=189.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE-EEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN-CVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~-~~l~v~~~~ 79 (356)
|+.+.|.|.+.|.|.|.|+|++++.++.... .............++.+|+|.|+|.|.|..|..... +.|.|...+
T Consensus 154 ~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p 230 (527)
T 3qs9_E 154 ENQDALVCISESVPEPIVEWVLCDSQGESCK---EESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTP 230 (527)
T ss_dssp SSSSCEEEEEEESSCCEEEEEEC----------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCC
T ss_pred CCceEEEEEEceecCCeEEEEECCCCCcccc---ccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEeccC
Confidence 4567899999999999999999988764221 111122233334456899999999999999988665 677776554
Q ss_pred cchhhhhhcccccccCccceeeeccc---CCceeeecccccccCCccccC----CCCceEEEEeeccccccccccccCCC
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIR---PAPAIITTRQEIKSSYSSHTD----DTGRTTTQMSTLSSNYSSSTNNATSP 152 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~---p~p~i~w~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (356)
.. ......+.+|+.+.|.|.+. |.|.+.|++++..+....... ........ ..-+.......
T Consensus 231 ~~----~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~-------~~~L~I~~v~~ 299 (527)
T 3qs9_E 231 QT----TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIR-------ILFAFVSSVAR 299 (527)
T ss_dssp CC----SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEE-------EEEEEESSCCG
T ss_pred cc----CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceee-------EEEEEEccCCc
Confidence 33 23355678999999999984 677899999887654321110 00000000 00011112223
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccC--CceeecCCCeEEEEEEEcCCCCCeEEEEECCEEc
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL--TDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPL 230 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~ 230 (356)
.+.+.|.|.+... ......+.+ ..+|.+...+ ....+.+|+.+.|.|.+.|+|.|.|.|+|+|..+
T Consensus 300 ~DsG~Y~C~a~N~-------~~~~~~L~V-----~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l 367 (527)
T 3qs9_E 300 NDTGYYTCSSSKH-------PSQSALVTI-----VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSF 367 (527)
T ss_dssp GGCEEEEEEETTE-------EEEEEEEEE-----C--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEE
T ss_pred ccCeEEEEEEEeC-------CCceEEEEE-----EccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEEC
Confidence 3333333332221 223344444 3445444333 3467889999999999999999999999999998
Q ss_pred cCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc------------------eeEEeC
Q psy12422 231 NSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL------------------DLKYKN 292 (356)
Q Consensus 231 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~------------------~~~~~~ 292 (356)
....... .....|.|.+++.+|+|.|+|.|.|..|.....+.|.+..+|.+. .+.|..
T Consensus 368 ~~~~~~~----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~~~~~l~C~a~g~P~p~i~W~~ 443 (527)
T 3qs9_E 368 PCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASASQASCFSDGYPLPSWTWKK 443 (527)
T ss_dssp ECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECCCCE---EEEECSSCCEEEEEC
T ss_pred cCCcccc----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeCCCCEEEEEEEEEcCCeEEEEE
Confidence 7654321 123479999999999999999999999999888888755444332 455532
Q ss_pred C----------------------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCC
Q psy12422 293 G----------------------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAA 335 (356)
Q Consensus 293 ~----------------------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 335 (356)
. ...+.|.-...+|+|.|+|.|.|.+|..+..+.|.|.++-.+
T Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~p~~~ 514 (527)
T 3qs9_E 444 CSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFPF 514 (527)
T ss_dssp CC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC--------
T ss_pred CCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEecCCCcee
Confidence 1 122333333356999999999999999999999988776443
No 18
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=5.6e-34 Score=260.94 Aligned_cols=320 Identities=16% Similarity=0.147 Sum_probs=203.9
Q ss_pred CCceEEEEEeccC-CCCeeEEeeCCEEcc--------------cCCeeEEec---CCeEEEEEeeCCCCCCeEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTK-PPPTVKWYKGNRELS--------------KRDYSMSYS---DGVVSMEIIDCKPEDSGEYKCVATN 62 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~~v~W~k~g~~l~--------------~~~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~a~n 62 (356)
|+++.|.|.+.+. |.+.+.|||++.... ..+..+... .+.++|.|.+++.+|+|.|+|.|.|
T Consensus 127 G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 206 (585)
T 2ocw_A 127 GRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGD 206 (585)
T ss_pred CCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEecc
Confidence 7899999999765 457899999876421 122222222 2345899999999999999999999
Q ss_pred CCceeEEEEEEEEeccccchhhhhhcccccccCccceeeeccc-CC---ceeeec-ccccccCCcccc------CCCCce
Q psy12422 63 KHGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIR-PA---PAIITT-RQEIKSSYSSHT------DDTGRT 131 (356)
Q Consensus 63 ~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~-p~---p~i~w~-~~~~~~~~~~~~------~~~~~~ 131 (356)
..|.....+.|.|..+++ ....+.+|+.+.|.|.+. +. +.+.|. +++......... ....+.
T Consensus 207 ~~g~~~~~~~l~V~~~~p-------~~~~~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~ 279 (585)
T 2ocw_A 207 DSNSNKKNADLQVLKPEP-------ELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRI 279 (585)
T ss_pred CCccccceEEEEEccCCC-------ceeEEcCCCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCce
Confidence 999988889999876432 122467899999999976 33 567776 554221110000 001111
Q ss_pred EEEEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEE
Q psy12422 132 TTQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSA 211 (356)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C 211 (356)
........+.+. +........+.+.|.|..................+.+ ..+|.+...+....+.+|+.+.|.|
T Consensus 280 ~~~~~~~~g~~~-L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V-----~~~p~~~~~~~~~~~~~G~~v~l~C 353 (585)
T 2ocw_A 280 LLNPQDKDGSFS-VVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFV-----NEESTIPRSPTVVKGVAGSSVAVLC 353 (585)
T ss_pred EeeccCCCcEEE-EEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEE-----ecccccccCCcceEEEeCCcEEEEE
Confidence 000000011111 1112223333344444333211100001113344555 4556666667788899999999999
Q ss_pred EEcCCCCCeE----EEEE--CCE--EccC---------CCceeEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCCceE
Q psy12422 212 VVKGDPEPRV----SWTK--NGQ--PLNS---------SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLGTAE 272 (356)
Q Consensus 212 ~~~g~p~p~i----~W~~--~g~--~~~~---------~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 272 (356)
.+.|.|.|.+ .|++ ||. .+.. ..++.+.. ..+..+|.|.+++.+|+|.|+|.| |..|...
T Consensus 354 ~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~ 432 (585)
T 2ocw_A 354 PYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWR 432 (585)
T ss_pred ecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccc
Confidence 9999999987 7999 886 4432 22232222 234456999999999999999999 9888877
Q ss_pred EEEEEecCCC-Cccc-----------------------------eeEEeCC------------------------eEEEE
Q psy12422 273 TKCKLTPLNS-SNIL-----------------------------DLKYKNG------------------------VASLQ 298 (356)
Q Consensus 273 ~~~~l~p~~~-~~~~-----------------------------~~~~~~~------------------------~~~L~ 298 (356)
..+.|..... +.+. .+.|.++ ...|.
T Consensus 433 ~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 512 (585)
T 2ocw_A 433 TTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLT 512 (585)
T ss_pred eeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEE
Confidence 7666662210 1000 2344331 15899
Q ss_pred EecCCCCCCeEEEEEEEcCCcceEE-EEEEEEEecCC
Q psy12422 299 IQEVFPEDEGVYVCTATNSLGTAET-KCKLTVRSTPA 334 (356)
Q Consensus 299 i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~ 334 (356)
|.+++.+|+|.|+|.|.|..|..+. .+.|.|+.+|.
T Consensus 513 i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p~ 549 (585)
T 2ocw_A 513 LNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERKA 549 (585)
T ss_pred ECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeeee
Confidence 9999999999999999999997776 59999999984
No 19
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=8.5e-35 Score=262.74 Aligned_cols=320 Identities=15% Similarity=0.173 Sum_probs=198.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--EEcc-------------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--RELS-------------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~~l~-------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++++|.|.+.+.|.+.|.|||++ ..+. ..++.....++..+|+|.+++.+|+|.|+|.|.|..|
T Consensus 15 G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g 94 (523)
T 2rcj_C 15 GQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSD 94 (523)
T ss_pred CCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCC
Confidence 799999999999999999999974 2211 1233333345567899999999999999999999866
Q ss_pred e---eEEEEEEEEeccccchhh--hhhcccccccCccceeeeccc--CC--ceeeecccccccCCccccC-----CCCce
Q psy12422 66 T---DETNCVVIVESEEESKEQ--QELAHNFLYSGDRKYIEKHIR--PA--PAIITTRQEIKSSYSSHTD-----DTGRT 131 (356)
Q Consensus 66 ~---~~~~~~l~v~~~~~~~~~--~~~~~~~~~~g~~~~l~c~~~--p~--p~i~w~~~~~~~~~~~~~~-----~~~~~ 131 (356)
. ....+.|.|...+..++. .......+.+|+.+.|.|.+. |+ +.+.|++++..+....... .++..
T Consensus 95 ~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~ 174 (523)
T 2rcj_C 95 NSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKY 174 (523)
T ss_pred ccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCE
Confidence 3 234567777543211111 112223456799999999987 33 3799999877654322110 11110
Q ss_pred -----EE---EEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecC
Q psy12422 132 -----TT---QMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDD 203 (356)
Q Consensus 132 -----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~ 203 (356)
.. ....+.+.|.|.+.+..... .....+... .....+|.+........+.+
T Consensus 175 ~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~--------------------~~~~~~~~~-~~~~~~P~v~~~~~~~~~~~ 233 (523)
T 2rcj_C 175 AASSYLSLTPEQWKSHRSYSCQVTHEGSTV--------------------EKTVAPTEC-SASTKGPSVFPLAPSSKSTS 233 (523)
T ss_pred EEEEEEEEechhcCCCceEEEEEEecCccc--------------------ccceeeeec-CCCCcCCEEEecCCCccccc
Confidence 00 11234555666654432211 011111100 01134555553333445789
Q ss_pred CCeEEEEEEEcCC-CCC-eEEEEECCEEccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 204 GQCLDLSAVVKGD-PEP-RVSWTKNGQPLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 204 g~~~~l~C~~~g~-p~p-~i~W~~~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
|+.+.|.|.+.|. |.| .|.|+++|..+...........++ .+.|.|.+++.+| |.|+|.|.|..|.......+
T Consensus 234 G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l 312 (523)
T 2rcj_C 234 GGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRV 312 (523)
T ss_pred CCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEec
Confidence 9999999999886 877 899999998754311111111112 3589999999999 99999999999986555544
Q ss_pred ecCC-------C-----------------------Cc--cceeEEeCC----------------------eEEEEEecCC
Q psy12422 278 TPLN-------S-----------------------SN--ILDLKYKNG----------------------VASLQIQEVF 303 (356)
Q Consensus 278 ~p~~-------~-----------------------~~--~~~~~~~~~----------------------~~~L~i~~v~ 303 (356)
.+.. . +. ...+.|.++ .+.|.|.++.
T Consensus 313 ~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~ 392 (523)
T 2rcj_C 313 EPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQN 392 (523)
T ss_pred CCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHH
Confidence 2100 0 00 013444331 1358898899
Q ss_pred CCCCeEEEEEEEcCCcceEEEEEEE----EEecCCCCCCCCCC
Q psy12422 304 PEDEGVYVCTATNSLGTAETKCKLT----VRSTPAANLGKSPS 342 (356)
Q Consensus 304 ~~d~G~Y~C~a~n~~g~~~~~~~l~----V~~~p~~~~~~~~~ 342 (356)
.+|+|.|+|.|.|..|.......|. +..+|.+...+.+.
T Consensus 393 ~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~ 435 (523)
T 2rcj_C 393 WLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSR 435 (523)
T ss_pred hcCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCEEEEeCCCh
Confidence 9999999999999888766555565 45667665544443
No 20
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=1.5e-36 Score=274.24 Aligned_cols=324 Identities=12% Similarity=0.091 Sum_probs=198.0
Q ss_pred CCceEEEEEeccCCCCeeEEee-CCEEcccCCeeEEecCCeEEEEEeeCCCCCCe-EEEEEEEeCCceeEE-EEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYK-GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSG-EYKCVATNKHGTDET-NCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k-~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y~C~a~n~~g~~~~-~~~l~v~~ 77 (356)
|+++.|.|.+.+.|.+.|+||| ||..+..........++ .|.|.+++.+|+| .|+|.|.|..+...+ .+.|.|..
T Consensus 129 G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~--~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~ 206 (524)
T 2ec8_A 129 DNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKA--GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRP 206 (524)
T ss_dssp TSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTT--EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEEC
T ss_pred CCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCc--cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEe
Confidence 7899999999987779999998 88888755433333344 7999999999999 999999998776543 67777763
Q ss_pred cccc-hh-hhhhcccccccCccceeeeccc--CCce-eeeccccccc--CCcccc-CCCCceEEEEeecccccccccccc
Q psy12422 78 EEES-KE-QQELAHNFLYSGDRKYIEKHIR--PAPA-IITTRQEIKS--SYSSHT-DDTGRTTTQMSTLSSNYSSSTNNA 149 (356)
Q Consensus 78 ~~~~-~~-~~~~~~~~~~~g~~~~l~c~~~--p~p~-i~w~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 149 (356)
.... +. ........+.+|+.+.|.|.+. |.|. +.|++++... ...... ........ . ........
T Consensus 207 ~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~L~I~~ 279 (524)
T 2ec8_A 207 AFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYE------R-QATLTISS 279 (524)
T ss_dssp CCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEE------E-EEEEEESS
T ss_pred CCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccc------e-EEEEEECC
Confidence 2111 11 1122334688999999999987 6666 9999988763 111100 00000000 0 00111112
Q ss_pred CCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccC---CceeecCCCeEEEEEEEcCCCCCe-EEEEE
Q psy12422 150 TSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL---TDKTIDDGQCLDLSAVVKGDPEPR-VSWTK 225 (356)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~v~~g~~~~l~C~~~g~p~p~-i~W~~ 225 (356)
....+.+.|.|......+ .......+.+ ..+|.+...+ ....+.+|+.+.|.|.+.|+|.|. +.|++
T Consensus 280 ~~~~D~G~Y~C~a~n~~g----~~~~~~~l~V-----~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k 350 (524)
T 2ec8_A 280 ARVNDSGVFMCYANNTFG----SANVTTTLEV-----VDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIY 350 (524)
T ss_dssp CCTTTCEEEEEEEECSSC----EEEEEEEEEE-----ESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEES
T ss_pred CCHHHCEEEEEEEEecCC----ceEEEEEEEE-----eccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEE
Confidence 233344444444322211 1122444444 4456655433 468899999999999999999999 99999
Q ss_pred CCEEccCCCc-eeEEEeC----CEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc--------------
Q psy12422 226 NGQPLNSSNI-LDLKYKN----GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL-------------- 286 (356)
Q Consensus 226 ~g~~~~~~~~-~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~-------------- 286 (356)
+|..+..... +.....+ ....|.|.+++.+|+|.|+|.|.|..|....++.|.+..+|.+.
T Consensus 351 ~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~~~~g~l~C~~ 430 (524)
T 2ec8_A 351 MNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVA 430 (524)
T ss_dssp SSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEECCSSSCEEEEE
T ss_pred CCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEeecccCcCcEEEEEE
Confidence 9998876542 2221111 24689999999999999999999999998888777733222211
Q ss_pred ------eeEEeCCe-------------------------EEEE----EecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 287 ------DLKYKNGV-------------------------ASLQ----IQEVFPEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 287 ------~~~~~~~~-------------------------~~L~----i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
.+.|..+. +.|. |.....+|+|.|+|.|.|..|..+..+.|.|+.
T Consensus 431 ~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e 510 (524)
T 2ec8_A 431 AGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKG 510 (524)
T ss_dssp EEESCCEEECCCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC--
T ss_pred EeecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEec
Confidence 34443321 2233 333336999999999999999999999999999
Q ss_pred cCCCCCCCCCC
Q psy12422 332 TPAANLGKSPS 342 (356)
Q Consensus 332 ~p~~~~~~~~~ 342 (356)
++.....+.+.
T Consensus 511 ~~~~~~~~~~~ 521 (524)
T 2ec8_A 511 NNKEQIHPHHH 521 (524)
T ss_dssp -----------
T ss_pred CCHHHcCcccc
Confidence 88766555443
No 21
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=4.3e-36 Score=258.77 Aligned_cols=288 Identities=14% Similarity=0.152 Sum_probs=192.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcc-c--------------CCeeEEe---cCCeEEEEEeeCCCCCCeEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELS-K--------------RDYSMSY---SDGVVSMEIIDCKPEDSGEYKCVATN 62 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~-~--------------~~~~~~~---~~~~~~L~i~~~~~~D~G~Y~C~a~n 62 (356)
|+++.|.|.+.+.|.+.|.|||++..+. . .++.... .++..+|.|.+++.+|+|.|+|.|.|
T Consensus 9 G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n 88 (363)
T 1wio_A 9 GDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVED 88 (363)
T ss_dssp TSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEEEEETT
T ss_pred CCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEEEEEEE
Confidence 7999999999999999999999985421 0 1111111 33455899999999999999999988
Q ss_pred CCceeEEEEEEEEeccccchhhhhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCCCceEEEEeeccc
Q psy12422 63 KHGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSS 140 (356)
Q Consensus 63 ~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (356)
..+ .+.|.|..... .+...+.+|+.+.|.|.+. |.|.+.|++++...... ............+.|
T Consensus 89 ~~~----~~~l~V~~~~~------~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~---~~~L~i~~v~~~d~G 155 (363)
T 1wio_A 89 QKE----EVQLLVFGLTA------NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQG---GKTLSVSQLELQDSG 155 (363)
T ss_dssp EEE----EEEEEEEEEEE------SSCSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEEE---SSEEEECSBCGGGCE
T ss_pred CCC----cEEEEEEeCCC------CCceEEecCCCEEEEEEcCCCCCCeEEEEcCCCccccc---ceEEEEeeCChhcCC
Confidence 643 55666654221 2223678999999999986 77889999886543110 000001111334456
Q ss_pred cccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-----
Q psy12422 141 NYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG----- 215 (356)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g----- 215 (356)
.|.|.+.+. .........+.+ ..+|.. +....+.+|+.+.|.|.+.+
T Consensus 156 ~Y~C~a~~~--------------------~~~~~~~~~l~v-----~~~p~~---~~~~~~~~G~~v~l~C~~~~~~~~~ 207 (363)
T 1wio_A 156 TWTCTVLQN--------------------QKKVEFKIDIVV-----LAFQKA---SSIVYKKEGEQVEFSFPLAFTVEKL 207 (363)
T ss_dssp ECEEEEEET--------------------TEEEEECCEECE-----ECCSCS---EEEEEEETBCCEEEECCCCCCCCSS
T ss_pred EEEEEEecC--------------------CCeEEEEEEEEE-----ecCCCC---CCceEEecCCEEEEEEEEecccccC
Confidence 666665221 111111222222 112221 14567889999999998877
Q ss_pred CCCCeEEEEECCEEccC--------CCceeEEE----------eCCEEEEEEccCCCCCCeEEEEEEEcC--CCceEEEE
Q psy12422 216 DPEPRVSWTKNGQPLNS--------SNILDLKY----------KNGVASLQIQEVFPEDEGVYVCTATNS--LGTAETKC 275 (356)
Q Consensus 216 ~p~p~i~W~~~g~~~~~--------~~~~~~~~----------~~~~~~L~i~~v~~~d~G~Y~C~a~n~--~g~~~~~~ 275 (356)
+|.|.+.|+++|..+.. ...+.+.. ..+...|.|.+++.+|+|.|+|.|.|. .|.....+
T Consensus 208 ~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~ 287 (363)
T 1wio_A 208 TGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEV 287 (363)
T ss_dssp CEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEE
T ss_pred CCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEE
Confidence 88899999999988765 33333322 222458999999999999999999999 99887776
Q ss_pred EEecC---------------CCCccceeEEeCC------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy12422 276 KLTPL---------------NSSNILDLKYKNG------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 330 (356)
Q Consensus 276 ~l~p~---------------~~~~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 330 (356)
.|.+. .++....+.|.++ ...|.|.+++.+|+|.|+|.|+|. |....+..|.|.
T Consensus 288 ~l~V~~v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V~ 362 (363)
T 1wio_A 288 NLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKVL 362 (363)
T ss_dssp EEEEEEECCCSSSEEEEEESSCCTTCCEEEECSSSSCSEEESSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEEC
T ss_pred eEEEEEecCCCeeEEEEEccccCCCccEEEEeCCCceeeeeeeeeeeeccccceeEEEEEecC-CeEEEecceEec
Confidence 66522 1111113667652 467899999999999999999975 566667776663
No 22
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.1e-34 Score=238.56 Aligned_cols=229 Identities=24% Similarity=0.407 Sum_probs=160.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEE-ecCC-eEEEEEeeCCC-CCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMS-YSDG-VVSMEIIDCKP-EDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~-~~~~-~~~L~i~~~~~-~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.|+|+|+|..+...++... ..++ ...|.|.+++. +|+|.|+|.|.|..|.....+.|.|..
T Consensus 21 G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 100 (304)
T 2yd9_A 21 GGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLR 100 (304)
T ss_dssp TSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEEC
T ss_pred CCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEec
Confidence 78999999999999999999999999976665443 2333 37899999998 999999999999999988888888874
Q ss_pred cccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
.+..+
T Consensus 101 ~~~~p--------------------------------------------------------------------------- 105 (304)
T 2yd9_A 101 EDQLP--------------------------------------------------------------------------- 105 (304)
T ss_dssp GGGCC---------------------------------------------------------------------------
T ss_pred cccCC---------------------------------------------------------------------------
Confidence 31100
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCce-
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNIL- 236 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~- 236 (356)
...|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+......
T Consensus 106 -----------------------------~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~ 156 (304)
T 2yd9_A 106 -----------------------------SGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNG 156 (304)
T ss_dssp -----------------------------TTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTT
T ss_pred -----------------------------CCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcc
Confidence 12244555555677899999999999999999999999999988754321
Q ss_pred eEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceE---EEEEEecC-CCCc---------cc-----------------
Q psy12422 237 DLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAE---TKCKLTPL-NSSN---------IL----------------- 286 (356)
Q Consensus 237 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~---~~~~l~p~-~~~~---------~~----------------- 286 (356)
.+.. .....|.|.+++.+|+|.|+|.|.|..|... ..+.+... .+|. +.
T Consensus 157 ~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p 235 (304)
T 2yd9_A 157 RIKQ-LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMP 235 (304)
T ss_dssp SEEE-CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCC
T ss_pred eEEe-CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCC
Confidence 1111 1223899999999999999999999998765 34444210 0000 00
Q ss_pred eeEEeC-------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 287 DLKYKN-------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 287 ~~~~~~-------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
.+.|.. +...|.|.++ +|+|.|+|.|.|..|..+..+.|.|++++...
T Consensus 236 ~v~W~~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 296 (304)
T 2yd9_A 236 YVKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKAG 296 (304)
T ss_dssp EEEEEETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC--------
T ss_pred EEEEEECCEECCCcccccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCcccc
Confidence 455543 2234666665 69999999999999999999999999988754
No 23
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=3.1e-32 Score=249.40 Aligned_cols=335 Identities=14% Similarity=0.080 Sum_probs=203.8
Q ss_pred CCceEEEEEeccCCCC---eeEEeeCCEEcc---------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPP---TVKWYKGNRELS---------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEYKCVA 60 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~---~v~W~k~g~~l~---------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a 60 (356)
|++++|.|.+.+.|.+ .|.|||++..+. ..++.+.. .++.++|+|.+++.+|+|.|+|.|
T Consensus 15 G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~ 94 (585)
T 2ocw_A 15 GNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGL 94 (585)
T ss_pred CCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEEEEEEc
Confidence 7899999999888654 799999985321 11222222 456678999999999999999999
Q ss_pred EeCCceeEEEEEEEEeccccchhhhhhcccccccCccceeeeccc---CCceeeecccccccCCccccC-------CCCc
Q psy12422 61 TNKHGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIR---PAPAIITTRQEIKSSYSSHTD-------DTGR 130 (356)
Q Consensus 61 ~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~---p~p~i~w~~~~~~~~~~~~~~-------~~~~ 130 (356)
.|..+..+..+.|.|...+.. ........+.+|+.+.|.|.+. |.+.+.|++++.......... ...+
T Consensus 95 ~n~~~~~~~~~~l~V~~~p~~--~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r 172 (585)
T 2ocw_A 95 GINSRGLSFDVSLEVSQGPGL--LNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGR 172 (585)
T ss_pred ccCCCCceEEEEEEEecCccc--cCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCc
Confidence 999888888888888776432 2223445678999999999987 345699999865432110000 0011
Q ss_pred eEEEEeec-cccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEE
Q psy12422 131 TTTQMSTL-SSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDL 209 (356)
Q Consensus 131 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l 209 (356)
........ .+.+. +........+.+.|.|......+ .......|.+. ..+ +..+.+.+|+.+.|
T Consensus 173 ~~~~~~~~~~~~~~-L~I~~v~~~D~G~Y~C~a~n~~g----~~~~~~~l~V~----~~~------p~~~~~~~G~~v~l 237 (585)
T 2ocw_A 173 IRLDIQGTGQLLFS-VVINQLRLSDAGQYLCQAGDDSN----SNKKNADLQVL----KPE------PELVYEDLRGSVTF 237 (585)
T ss_pred EEEEeccCCCcEEE-EEEccCChhHCeEEEEEeccCCc----cccceEEEEEc----cCC------CceeEEcCCCcEEE
Confidence 11100000 01111 11222333344444444332211 12233444442 112 23456789999999
Q ss_pred EEEEcCCCC---CeEEEE-ECCEE----cc--------CCCceeEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 210 SAVVKGDPE---PRVSWT-KNGQP----LN--------SSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 210 ~C~~~g~p~---p~i~W~-~~g~~----~~--------~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
.|.+ +.|. +.+.|+ ++|.. +. ...++.+... .+..+|.|.+++.+|+|.|+|.|.|..+..
T Consensus 238 ~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~ 316 (585)
T 2ocw_A 238 HCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQ 316 (585)
T ss_pred EEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCcc
Confidence 9998 4443 678886 78732 11 1222222221 344589999999999999999999953332
Q ss_pred E----EEEEEecCCCCccc------------------------------eeEEeC--Ce---------------------
Q psy12422 272 E----TKCKLTPLNSSNIL------------------------------DLKYKN--GV--------------------- 294 (356)
Q Consensus 272 ~----~~~~l~p~~~~~~~------------------------------~~~~~~--~~--------------------- 294 (356)
. ..+.|.....+.+. ++.|.+ +.
T Consensus 317 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~ 396 (585)
T 2ocw_A 317 EGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLS 396 (585)
T ss_pred ccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEE
Confidence 1 44444421111110 125654 11
Q ss_pred ---------EEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCCCCCCCCcccCCCCceeEee
Q psy12422 295 ---------ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAANLGKSPSKESDKAPRFFAIV 355 (356)
Q Consensus 295 ---------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~~~~ 355 (356)
..|.|.+++.+|+|.|+|.| |..|..+..+.|.|..+|.....+ +......+....+.|
T Consensus 397 ~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~-~~~~v~~G~~v~L~C 464 (585)
T 2ocw_A 397 LLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVP-GNVTAVLGETLKVPC 464 (585)
T ss_pred EeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccC-CceeEecCCcEEEEE
Confidence 23999999999999999999 999999999999998865544443 333333444445444
No 24
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.4e-34 Score=255.03 Aligned_cols=292 Identities=14% Similarity=0.185 Sum_probs=175.8
Q ss_pred CCceEEEEEeccCCCC---eeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeE--------E
Q psy12422 1 MQNVIKVKVGSTKPPP---TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE--------T 69 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~---~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~--------~ 69 (356)
|+++.|.|.+.|.|++ .|+|||+|+++....+. .......|.|.+++.+|+|.|+|.|.|..|... .
T Consensus 101 G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~ 178 (450)
T 1z7z_I 101 GKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV--GEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSA 178 (450)
T ss_dssp TSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECC--TTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECC
T ss_pred CCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccccc--ccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccC
Confidence 7899999999998888 89999999988643211 123345899999999999999999999876432 2
Q ss_pred EEEEEEeccccchhhhhhcccccccCccceeeeccc---C--CceeeecccccccCCccccCCCCceEEE----Eeeccc
Q psy12422 70 NCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIR---P--APAIITTRQEIKSSYSSHTDDTGRTTTQ----MSTLSS 140 (356)
Q Consensus 70 ~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~---p--~p~i~w~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 140 (356)
...+.|...+..++.. .....+.+|+.+.|.|.+. | .+.+.|++++..+........+...... ...+.|
T Consensus 179 ~~~l~v~~~~~~~p~~-~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~G 257 (450)
T 1z7z_I 179 PYQLQTFVLPATPPQL-VSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEG 257 (450)
T ss_dssp CEECEECCCCSSCCEE-ECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCCEEEEETTEEEEEEEEECCGGGCE
T ss_pred ccceeeeccCCCCCEe-cCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCceEEecCCceeEEEEEEeEhhhCC
Confidence 3444554331111111 1125678999999999987 4 5679999988766542111111111110 123334
Q ss_pred --cccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCC
Q psy12422 141 --NYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE 218 (356)
Q Consensus 141 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~ 218 (356)
.|.|...+.. + .......+.+.. ..+|.+... ...+.+|+.++|.|.+. |.
T Consensus 258 ~~~Y~C~a~n~~----------------g----~~~~~~~l~V~~---~~~p~i~~~--~~~v~~G~~v~l~C~~~--p~ 310 (450)
T 1z7z_I 258 TQRLTCAVILGN----------------Q----SQETLQTVTIYS---FPAPNVILT--KPEVSEGTEVTVKCEAH--PR 310 (450)
T ss_dssp EEEEEEEEEETT----------------E----EEEEEEEEEEEC---CCCCEEEES--CSEEETTCEEEEEEEC-----
T ss_pred cEEEEEEEccCC----------------c----cEEEEEEEEEec---CCCCeEecC--CeeEeCCCcEEEEEecC--CC
Confidence 4444432221 1 111122233311 234555433 45899999999999998 89
Q ss_pred CeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCC-c---eEEEEEEe----cCCC-----Ccc
Q psy12422 219 PRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG-T---AETKCKLT----PLNS-----SNI 285 (356)
Q Consensus 219 p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g-~---~~~~~~l~----p~~~-----~~~ 285 (356)
|.++| +|..+... +....|.|.+++.+|+|.|+|.|.|..+ . ....+.|. |... ..+
T Consensus 311 p~i~W--~g~~~~~~--------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~ 380 (450)
T 1z7z_I 311 AKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNW 380 (450)
T ss_dssp -----------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEE
T ss_pred CEeEE--CCEEcCCC--------CceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCce
Confidence 99999 77766221 1223799999999999999999997666 2 22444444 2111 100
Q ss_pred c-------------------eeEEeCCeEEE----EEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy12422 286 L-------------------DLKYKNGVASL----QIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRST 332 (356)
Q Consensus 286 ~-------------------~~~~~~~~~~L----~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 332 (356)
. .+.|.++...+ .+.+++.+|+|.|+|.|.|..|..+..+.|.|+++
T Consensus 381 ~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 381 TWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450 (450)
T ss_dssp EEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSCEECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred eEcCCCeEEEEEecccCCCCcEEEEECCcccCCCCCeEeEehhhCeEEEEEEEeCCCceeEEEEEEEEcC
Confidence 0 45555432100 01168889999999999999999999999999865
No 25
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=4.3e-32 Score=240.56 Aligned_cols=310 Identities=18% Similarity=0.205 Sum_probs=202.4
Q ss_pred CCceEEEEEeccCCCCee-----EEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTV-----KWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v-----~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v 75 (356)
|++++|.|.+.| |.|.+ .|+|++..+.... ...|.|.+++. |+| |+|.|.+..+..+..+.|.|
T Consensus 14 G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~~--------~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V 82 (450)
T 1z7z_I 14 GGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGNN--------RKVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTV 82 (450)
T ss_dssp TEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTTT--------EEEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEE
T ss_pred CCcEEEEEEccC-CCcccccccceeeecceEecCCC--------ceEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEE
Confidence 789999999999 89998 9999887554322 23799999987 999 99999888777888888888
Q ss_pred eccccchhhhhhcccccccCccceeeeccc--CCc---eeeecccccccCCccccCCCCceEEE----Eeeccccccccc
Q psy12422 76 ESEEESKEQQELAHNFLYSGDRKYIEKHIR--PAP---AIITTRQEIKSSYSSHTDDTGRTTTQ----MSTLSSNYSSST 146 (356)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p---~i~w~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 146 (356)
..++.... .......+.+|+.+.|.|.+. |.| .+.|++++..+............... ...+.+.|.|.+
T Consensus 83 ~~~P~~~~-~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 161 (450)
T 1z7z_I 83 YWTPERVE-LAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRT 161 (450)
T ss_dssp EBCCSEEE-ECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEE
T ss_pred EeCCCcce-ecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEeeccccCceEEEEE
Confidence 86443321 122335578999999999987 555 78999987765433211111111111 223356666665
Q ss_pred cccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCC-C--CCeEEE
Q psy12422 147 NNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGD-P--EPRVSW 223 (356)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p--~p~i~W 223 (356)
.+......... ....+....+.+... ...+|.+... ..+.+|+.+.|.|.+.|. | .+.+.|
T Consensus 162 ~n~~g~~~~~~------------~~~~s~~~~l~v~~~-~~~~p~~~~~---~~v~~G~~v~l~C~~~g~~P~~~~~~~W 225 (450)
T 1z7z_I 162 ELDLRPQGLEL------------FENTSAPYQLQTFVL-PATPPQLVSP---RVLEVDTQGTVVCSLDGLFPVSEAQVHL 225 (450)
T ss_dssp EEECGGGTSCE------------EEEECCCEECEECCC-CSSCCEEECC---SEEETTSEEEEEEEEESCTTGGGCEEEE
T ss_pred EcccCCCCceE------------EeeccCccceeeecc-CCCCCEecCc---eeEEeCCcEEEEEEeeCCCCCCceEEEE
Confidence 54432221100 001112222222111 1234444322 578999999999999998 7 688999
Q ss_pred EECCEEccCCCceeEEEeCCEEEEE-EccCCCCCCe--EEEEEEEcCCCceEEEEEEecCC--CCccc------------
Q psy12422 224 TKNGQPLNSSNILDLKYKNGVASLQ-IQEVFPEDEG--VYVCTATNSLGTAETKCKLTPLN--SSNIL------------ 286 (356)
Q Consensus 224 ~~~g~~~~~~~~~~~~~~~~~~~L~-i~~v~~~d~G--~Y~C~a~n~~g~~~~~~~l~p~~--~~~~~------------ 286 (356)
+++|..+.. . .........+. ..+++.+|+| .|+|.|.|..|.......+.... .+.+.
T Consensus 226 ~~~~~~~~~--~--~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~~~~v~~G~~v 301 (450)
T 1z7z_I 226 ALGDQRLNP--T--VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEV 301 (450)
T ss_dssp EETTEECCC--E--EEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEE
T ss_pred eCCCEeCCc--e--EEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecCCeeEeCCCcE
Confidence 999998865 2 23333322222 2278999999 99999999999887776665322 12211
Q ss_pred ----------eeEEe-------CCeEEEEEecCCCCCCeEEEEEEEcCCc----ceEEEEEEEEEecCCCCCCCCCC
Q psy12422 287 ----------DLKYK-------NGVASLQIQEVFPEDEGVYVCTATNSLG----TAETKCKLTVRSTPAANLGKSPS 342 (356)
Q Consensus 287 ----------~~~~~-------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~~p~~~~~~~~~ 342 (356)
.+.|. .....|.|.++..+|+|.|+|.|.|..| .....+.|.|.++|.+...+.|.
T Consensus 302 ~l~C~~~p~p~i~W~g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~ 378 (450)
T 1z7z_I 302 TVKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPG 378 (450)
T ss_dssp EEEEEC----------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCS
T ss_pred EEEEecCCCCEeEECCEEcCCCCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCC
Confidence 23441 1234699999999999999999997665 34478899999999887765433
No 26
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=6e-32 Score=225.74 Aligned_cols=220 Identities=22% Similarity=0.343 Sum_probs=160.5
Q ss_pred CCceEEEEEeccCC-CCeeEEee-CCEEcccC--CeeEE-ecCCeEEEEEeeCCCCCCeEEEEEEEeCCce-eEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKP-PPTVKWYK-GNRELSKR--DYSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNKHGT-DETNCVVI 74 (356)
Q Consensus 1 g~~v~l~C~~~g~p-~~~v~W~k-~g~~l~~~--~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~ 74 (356)
|+++.|.|.+.+.| .+.|+|+| ||..+... ++... ..+....|.|.+++.+|+|.|+|.+.|..|. .+..+.|.
T Consensus 17 G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~ 96 (291)
T 1qz1_A 17 GESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVK 96 (291)
T ss_dssp TCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEE
Confidence 78999999999887 68999999 88888643 22222 2345679999999999999999999998754 34455555
Q ss_pred EeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcc
Q psy12422 75 VESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSK 154 (356)
Q Consensus 75 v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (356)
|..
T Consensus 97 v~~----------------------------------------------------------------------------- 99 (291)
T 1qz1_A 97 IFQ----------------------------------------------------------------------------- 99 (291)
T ss_dssp EEC-----------------------------------------------------------------------------
T ss_pred eec-----------------------------------------------------------------------------
Confidence 532
Q ss_pred ceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC
Q psy12422 155 KITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN 234 (356)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~ 234 (356)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....
T Consensus 100 ----------------------------------~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~ 145 (291)
T 1qz1_A 100 ----------------------------------KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKK 145 (291)
T ss_dssp ----------------------------------CSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTC
T ss_pred ----------------------------------cccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCC
Confidence 1223333345578899999999999999999999999998876443
Q ss_pred ceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceE--EEEEEe----cCC----CC-ccc-----------------
Q psy12422 235 ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAE--TKCKLT----PLN----SS-NIL----------------- 286 (356)
Q Consensus 235 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~----p~~----~~-~~~----------------- 286 (356)
........ ...|.|.+++.+|+|.|+|.|.|..+... ..+.+. |.. .+ ...
T Consensus 146 ~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p 224 (291)
T 1qz1_A 146 DVRFIVLS-NNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFP 224 (291)
T ss_dssp CTTEEECT-TSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEES
T ss_pred CceEEEcc-CCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeC
Confidence 22222222 23799999999999999999999875432 222222 110 00 000
Q ss_pred --eeEEeC-------------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy12422 287 --DLKYKN-------------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRST 332 (356)
Q Consensus 287 --~~~~~~-------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 332 (356)
.+.|.. ....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.++
T Consensus 225 ~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~k 291 (291)
T 1qz1_A 225 EPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291 (291)
T ss_dssp CCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEcC
Confidence 344432 2357999999999999999999999999999999999753
No 27
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=1.1e-30 Score=227.26 Aligned_cols=222 Identities=22% Similarity=0.306 Sum_probs=171.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeC--CEEccc------CCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKG--NRELSK------RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCV 72 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~--g~~l~~------~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 72 (356)
|+++.|.|.+.|.|.|.|+|+|+ |..+.. .++.+....+...|.|.+++.+|+|.|+|.|.|..|..+..+.
T Consensus 15 G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 94 (389)
T 2jll_A 15 NGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMY 94 (389)
T ss_dssp TSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEE
Confidence 78999999999999999999999 988864 2344444456679999999999999999999999999888888
Q ss_pred EEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCC
Q psy12422 73 VIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSP 152 (356)
Q Consensus 73 l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (356)
|.|..++
T Consensus 95 l~V~~~P------------------------------------------------------------------------- 101 (389)
T 2jll_A 95 LDIEYAP------------------------------------------------------------------------- 101 (389)
T ss_dssp EEEEEEE-------------------------------------------------------------------------
T ss_pred EEEEeCC-------------------------------------------------------------------------
Confidence 8886431
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccC
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNS 232 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~ 232 (356)
.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+..
T Consensus 102 --------------------------------------~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~ 143 (389)
T 2jll_A 102 --------------------------------------KFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPA 143 (389)
T ss_dssp --------------------------------------EECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSC
T ss_pred --------------------------------------EEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCc
Confidence 111112234577899999999999999999999999999876
Q ss_pred CC--ceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCC---CC-ccc--------------------
Q psy12422 233 SN--ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLN---SS-NIL-------------------- 286 (356)
Q Consensus 233 ~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~---~~-~~~-------------------- 286 (356)
.. ++.....+....|.|.+++.+|+|.|+|.|.|..|.....+.+.... .+ .+.
T Consensus 144 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~ 223 (389)
T 2jll_A 144 KNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHG 223 (389)
T ss_dssp TTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCT
T ss_pred ccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCC
Confidence 54 44445555667899999999999999999999999887776665211 11 110
Q ss_pred -------eeEEeC-------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecC
Q psy12422 287 -------DLKYKN-------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTP 333 (356)
Q Consensus 287 -------~~~~~~-------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 333 (356)
.+.|.. ....|.|.++...|.|.|+|.|.|..|....+..+.+.-.+
T Consensus 224 g~pi~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~ 290 (389)
T 2jll_A 224 GVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLP 290 (389)
T ss_dssp TSCEEEEEEEEEETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred CcceEEEEEEEEECCCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecC
Confidence 112211 22579999999999999999999999987655555555433
No 28
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=3.6e-35 Score=277.31 Aligned_cols=306 Identities=18% Similarity=0.273 Sum_probs=0.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeE--EEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE--TNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~--~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.+.|+|+|+|..+.... .+. +...|.|.+++.+|+|.|+|.|.|..|... ..+.|.|..+
T Consensus 345 G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~-~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~ 420 (772)
T 3v2a_R 345 GERVRIPAKYLGYPPPEIKWYKNGIPLESNH-TIK---AGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVP 420 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcEEEEEEEeeeCCCeEEEEECCEeCCCCc-eEc---cceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecC
Confidence 6889999999999999999999999887532 111 334899999999999999999999988664 4456666654
Q ss_pred ccchhhhhh-cccccccCccceeeeccc--CCce-eeecccccccCCccc------------------------------
Q psy12422 79 EESKEQQEL-AHNFLYSGDRKYIEKHIR--PAPA-IITTRQEIKSSYSSH------------------------------ 124 (356)
Q Consensus 79 ~~~~~~~~~-~~~~~~~g~~~~l~c~~~--p~p~-i~w~~~~~~~~~~~~------------------------------ 124 (356)
+........ +...+.+|+.+.|.|.+. |.|. +.|++++........
T Consensus 421 P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~ 500 (772)
T 3v2a_R 421 PQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVN 500 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEe
Confidence 433222111 223478999999999987 6776 999986322100000
Q ss_pred --cC---CC-----CceEEEEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecc
Q psy12422 125 --TD---DT-----GRTTTQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFAN 194 (356)
Q Consensus 125 --~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 194 (356)
.. .. .........+.+.|.|.+.+..+ .......+.+ ..+|.+..
T Consensus 501 ~~~~~~~~~~~~~~~~L~i~~~~d~G~Y~C~a~N~~g--------------------~~~~~~~l~V-----~~~p~i~~ 555 (772)
T 3v2a_R 501 KNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVG--------------------RGERVISFHV-----TRGPEITL 555 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceeeccCcceEEEEEEEeecccCeEEEEEEEcccc--------------------ccceeEEEEE-----ECCceeec
Confidence 00 00 00000001223344444322211 1112233333 23555554
Q ss_pred cCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeE--------------------EEeCCEEEEEEccCCC
Q psy12422 195 KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDL--------------------KYKNGVASLQIQEVFP 254 (356)
Q Consensus 195 ~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~--------------------~~~~~~~~L~i~~v~~ 254 (356)
.+. ..+.+|+++.|.|.+.+.|.+.+.|+++|..+........ ........|.|.+++.
T Consensus 556 ~p~-~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 634 (772)
T 3v2a_R 556 QPD-MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASL 634 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCC-cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCc
Confidence 443 3578999999999999999999999998876543221111 1111234599999999
Q ss_pred CCCeEEEEEEEcCCCceE----EEEEEecCCCCccc--------------------------eeEEeC------------
Q psy12422 255 EDEGVYVCTATNSLGTAE----TKCKLTPLNSSNIL--------------------------DLKYKN------------ 292 (356)
Q Consensus 255 ~d~G~Y~C~a~n~~g~~~----~~~~l~p~~~~~~~--------------------------~~~~~~------------ 292 (356)
+|+|.|+|.|.|..+... ..+.+....+|.+. .+.|.+
T Consensus 635 ~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~ 714 (772)
T 3v2a_R 635 QDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIV 714 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeE
Confidence 999999999999765432 22222211111111 233322
Q ss_pred ---CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 293 ---GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 293 ---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
+.+.|.|.+++.+|+|.|+|.|.|..|..++++.|.|+++|...
T Consensus 715 ~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~ 761 (772)
T 3v2a_R 715 LKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKT 761 (772)
T ss_dssp -----------------------------------------------
T ss_pred EcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCcc
Confidence 25789999999999999999999999999999999999998754
No 29
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=2.6e-32 Score=230.76 Aligned_cols=256 Identities=21% Similarity=0.316 Sum_probs=175.4
Q ss_pred CCceEEEEEeccC-CCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTK-PPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.+. |.+.|+|+|+|..+..... ....++...|.|.+++.+|+|.|+|.+.|..|.....+.|.|...+
T Consensus 21 G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~ 99 (317)
T 2y25_A 21 ECNVLLKCKVANIKKETHIVWYKDEREISVDEK-HDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFK 99 (317)
T ss_dssp TTEEEEEEEEESCCTTCEEEEEETTEEECCSCC------CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHHH
T ss_pred CCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCc-EEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecCc
Confidence 7899999999887 7899999999999875432 2233555799999999999999999999999987777666555432
Q ss_pred cchhhhhhcccccccCccceeeeccc------------CCceeeecccccccCCccccC--CCCce--E---EEEeeccc
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIR------------PAPAIITTRQEIKSSYSSHTD--DTGRT--T---TQMSTLSS 140 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~------------p~p~i~w~~~~~~~~~~~~~~--~~~~~--~---~~~~~~~~ 140 (356)
. .........+.+|+.+.+.|... |.+.+.|++++..+....... ..... . .....+.+
T Consensus 100 ~--~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 177 (317)
T 2y25_A 100 E--LMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKG 177 (317)
T ss_dssp H--HHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCE
T ss_pred c--ccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCe
Confidence 1 12222344567888888888764 577899999877664321110 00000 0 01223345
Q ss_pred cccccccccCCCccceeeeeeccccCCCCCcccccceeeecC---------------CCCCCCCCeec-ccCCceeecCC
Q psy12422 141 NYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMP---------------PDTAMTPPQFA-NKLTDKTIDDG 204 (356)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~p~~~-~~~~~~~v~~g 204 (356)
.|.|.+.+..... .....+.+. ......+|.+. ..+....+.+|
T Consensus 178 ~Y~C~a~n~~g~~--------------------~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g 237 (317)
T 2y25_A 178 KYVMELFDGKTGH--------------------QKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEG 237 (317)
T ss_dssp EEEEEEECSSCEE--------------------EEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETT
T ss_pred eEEEEEEeCCceE--------------------EEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcC
Confidence 5555543322111 111111100 00002233333 34566789999
Q ss_pred CeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEe-CCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEec
Q psy12422 205 QCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 205 ~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
+.+.|.|.+.|+|.|.+.|+++|..+....++.+... +....|.|.+++.+|+|.|+|.|.|..|....++.|.+
T Consensus 238 ~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 313 (317)
T 2y25_A 238 KALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 313 (317)
T ss_dssp SBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 9999999999999999999999999987777666555 55679999999999999999999999999988888764
No 30
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=100.00 E-value=4.3e-31 Score=222.04 Aligned_cols=218 Identities=20% Similarity=0.377 Sum_probs=171.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC--CeeEE-ecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR--DYSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~--~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.+.|+|+|+|..+... ++.+. ..++...|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 19 G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (305)
T 2nzi_A 19 QSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEV 98 (305)
T ss_dssp TCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECE
T ss_pred CCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEec
Confidence 789999999999999999999999998753 33332 456677999999999999999999999999888888888864
Q ss_pred cccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
++..
T Consensus 99 ~p~~---------------------------------------------------------------------------- 102 (305)
T 2nzi_A 99 PAKI---------------------------------------------------------------------------- 102 (305)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 3210
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD 237 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~ 237 (356)
..|.....+....+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.
T Consensus 103 ------------------------------~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~ 152 (305)
T 2nzi_A 103 ------------------------------HLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQ 152 (305)
T ss_dssp ------------------------------CCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCE
T ss_pred ------------------------------CCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEE
Confidence 01111222234567889999999999999999999999999888777777
Q ss_pred EEEeCCEEEEEEcc-CCCCCCeEEEEEEEcCCCceEEEEEEecCCCCc----c---------ceeEEe------------
Q psy12422 238 LKYKNGVASLQIQE-VFPEDEGVYVCTATNSLGTAETKCKLTPLNSSN----I---------LDLKYK------------ 291 (356)
Q Consensus 238 ~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~----~---------~~~~~~------------ 291 (356)
+........|.|.+ ++.+|+|.|+|.|.|..|.....+.+.....|. + ..+.|.
T Consensus 153 ~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~ 232 (305)
T 2nzi_A 153 VIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITN 232 (305)
T ss_dssp EEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEE
T ss_pred EEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeE
Confidence 66666778999999 999999999999999999988877776221111 0 011111
Q ss_pred --------------C----CeEEEEEecCCCCCCeEEEEEEEcCCcceEEE
Q psy12422 292 --------------N----GVASLQIQEVFPEDEGVYVCTATNSLGTAETK 324 (356)
Q Consensus 292 --------------~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 324 (356)
. ....|.|.++...|.|.|+|.|.|..|....+
T Consensus 233 y~v~~~~~~~~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 233 YIVEKCATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp EEEEEEETTSCCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred EEEEEecCCCCccEECccccCceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 1 23579999999999999999999999977653
No 31
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.98 E-value=2.8e-32 Score=241.01 Aligned_cols=302 Identities=13% Similarity=0.156 Sum_probs=187.0
Q ss_pred CCceEEEEEeccCCC----CeeEEeeC--CEEc-------------ccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPP----PTVKWYKG--NREL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 61 (356)
Q Consensus 1 g~~v~l~C~~~g~p~----~~v~W~k~--g~~l-------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 61 (356)
|++++|.|.+.+.|. +.|.|||+ |..+ ...++.....++..+|+|.+++.+|+|.|+|.|.
T Consensus 16 G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 95 (438)
T 1qgc_4 16 GQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVATYYCQQS 95 (438)
T ss_dssp TSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred CCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCeeEEEEEe
Confidence 789999999988887 48999996 3322 1234444455667799999999999999999999
Q ss_pred eCCcee-EEEEEEEEeccccchhhhh-hcccccccCccceeeeccc---CCc-eeeecccccccCCc-c---cc--CCCC
Q psy12422 62 NKHGTD-ETNCVVIVESEEESKEQQE-LAHNFLYSGDRKYIEKHIR---PAP-AIITTRQEIKSSYS-S---HT--DDTG 129 (356)
Q Consensus 62 n~~g~~-~~~~~l~v~~~~~~~~~~~-~~~~~~~~g~~~~l~c~~~---p~p-~i~w~~~~~~~~~~-~---~~--~~~~ 129 (356)
|..+.. ...+.|.|......+.... .......+|+.+.|.|.+. |.| .+.|++++..+... . .. ..++
T Consensus 96 n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 175 (438)
T 1qgc_4 96 NEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDS 175 (438)
T ss_dssp SSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTC
T ss_pred cCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCC
Confidence 987643 3446677754322222111 1222345688999999985 666 79999987665433 0 00 1111
Q ss_pred ce----EEE----EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceee
Q psy12422 130 RT----TTQ----MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTI 201 (356)
Q Consensus 130 ~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v 201 (356)
.. ... ...+.+.|.|.+.+..... .....+.. ..++.....+....+
T Consensus 176 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~--------------------~~~~~~~~-----~~~~~~~~~~~~~~v 230 (438)
T 1qgc_4 176 TYSMSSTLTLTKDEYERHNSYTCEATHKTSTS--------------------PIVKSFNR-----NECEVMLVESGGGLV 230 (438)
T ss_dssp CEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS--------------------CEEEEEET-----TC-CCEEEEECCEEE
T ss_pred cEEEEEEEEEeCcccCCCCeEEEEEEecccCC--------------------ceeccccc-----ccceeEEecCCceEE
Confidence 10 011 1223566666664432211 11112221 111222233456779
Q ss_pred cCCCeEEEEEEEcCCC--CCeEEEEEC--CEEcc-----------------CCCceeEEEe--CCEEEEEEccCCCCCCe
Q psy12422 202 DDGQCLDLSAVVKGDP--EPRVSWTKN--GQPLN-----------------SSNILDLKYK--NGVASLQIQEVFPEDEG 258 (356)
Q Consensus 202 ~~g~~~~l~C~~~g~p--~p~i~W~~~--g~~~~-----------------~~~~~~~~~~--~~~~~L~i~~v~~~d~G 258 (356)
.+|+.+.|.|.+.|.| .+.+.|+++ |..+. ...++....+ .+...|.|.+++.+|+|
T Consensus 231 ~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G 310 (438)
T 1qgc_4 231 KPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTA 310 (438)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCC
T ss_pred ecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCE
Confidence 9999999999999998 678999996 43332 1234444333 34578999999999999
Q ss_pred EEEEEEEcCCC-----c--eEEEEEEe--cCCC----------------------------CccceeEEeCC--------
Q psy12422 259 VYVCTATNSLG-----T--AETKCKLT--PLNS----------------------------SNILDLKYKNG-------- 293 (356)
Q Consensus 259 ~Y~C~a~n~~g-----~--~~~~~~l~--p~~~----------------------------~~~~~~~~~~~-------- 293 (356)
.|+|.|.|..+ . ....+.+. +... |....+.|..+
T Consensus 311 ~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~ 390 (438)
T 1qgc_4 311 MYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 390 (438)
T ss_dssp EEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEE
T ss_pred EEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceee
Confidence 99999998433 1 11122221 0000 11113444331
Q ss_pred ------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy12422 294 ------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 328 (356)
Q Consensus 294 ------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 328 (356)
.+.|+|.++..+| |.|+|.|.|..|.......|.
T Consensus 391 ~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i~ 436 (438)
T 1qgc_4 391 FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 436 (438)
T ss_dssp CCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEECC
T ss_pred cCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeecC
Confidence 1258999999889 999999999999877666554
No 32
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.98 E-value=1.4e-32 Score=234.23 Aligned_cols=243 Identities=21% Similarity=0.350 Sum_probs=110.9
Q ss_pred CCceEEEEEeccC-CCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTK-PPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.+. |.+.|+|+|+|..+....+. ... ..+|.|.+++.+|+|.|+|.|.|. |.....+.|.|...+
T Consensus 23 G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~-~~~--~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~~ 98 (334)
T 1ry7_B 23 GDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERV-LVG--PQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDAP 98 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcEEEEeeCCCCCCCcceEEEECCeeCCCcccE-Eec--cceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEeccC
Confidence 7899999999876 67899999999988654321 122 238999999999999999999998 777777777776542
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
....... +. . ..
T Consensus 99 ~~~~~~~--------~~---------------------~----------~~----------------------------- 110 (334)
T 1ry7_B 99 SSGDDED--------GE---------------------D----------EA----------------------------- 110 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc--------cc---------------------c----------cc-----------------------------
Confidence 2110000 00 0 00
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecc----cCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCc
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFAN----KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNI 235 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~ 235 (356)
.. ... ...+|.+.. ......+.+|+.+.|.|.+.|+|.|.+.|+++|..+.....
T Consensus 111 ---------------~~--~~~----~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~ 169 (334)
T 1ry7_B 111 ---------------ED--TGV----DTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHR 169 (334)
T ss_dssp -----------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSS
T ss_pred ---------------cc--ccc----cCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccc
Confidence 00 000 012232221 12346788999999999999999999999999988875543
Q ss_pred e-eEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCC----CCccc------------------------
Q psy12422 236 L-DLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLN----SSNIL------------------------ 286 (356)
Q Consensus 236 ~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~----~~~~~------------------------ 286 (356)
. ..........|.|.+++.+|+|.|+|.|.|..|.....+.+.... .+.+.
T Consensus 170 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~ 249 (334)
T 1ry7_B 170 IGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSD 249 (334)
T ss_dssp TTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCS
T ss_pred ccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecC
Confidence 2 112223345899999999999999999999999887776666221 11110
Q ss_pred ---eeEEeC-----------C-------------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecC
Q psy12422 287 ---DLKYKN-----------G-------------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTP 333 (356)
Q Consensus 287 ---~~~~~~-----------~-------------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 333 (356)
.+.|.. + ...|.|.+++.+|+|.|+|.|.|..|..+..+.|.|...|
T Consensus 250 p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 329 (334)
T 1ry7_B 250 AQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAE 329 (334)
T ss_dssp SCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSC
T ss_pred CCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECC
Confidence 455532 0 1279999999999999999999999999999999999887
Q ss_pred CCC
Q psy12422 334 AAN 336 (356)
Q Consensus 334 ~~~ 336 (356)
...
T Consensus 330 ~~~ 332 (334)
T 1ry7_B 330 EEL 332 (334)
T ss_dssp CC-
T ss_pred CCc
Confidence 653
No 33
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.98 E-value=6.3e-31 Score=219.51 Aligned_cols=259 Identities=20% Similarity=0.324 Sum_probs=171.8
Q ss_pred CCceEEEEEeccCCCCeeEEee-CCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCcee-EEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYK-GNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD-ETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k-~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|. .+.|+| +|..+... ++.....+....|.|.+++.+|+|.|+|.+.|..|.. ...+.|.|..
T Consensus 19 G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~ 97 (291)
T 2wim_A 19 GESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQ 97 (291)
T ss_dssp TCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEEC
T ss_pred CCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecC
Confidence 789999999999875 899999 78777643 4445555566799999999999999999999998876 3566777765
Q ss_pred cccchhhhhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccc
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKK 155 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (356)
++... .......+.+|+.+.|.|.+. |.|.+.|++++......... +.. . ...+. .........+.
T Consensus 98 ~~~~~--~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~----~~~-~--~~~~~---L~i~~v~~~d~ 165 (291)
T 2wim_A 98 KLTFR--EVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDN----RFA-M--LANNN---LQILNINKSDE 165 (291)
T ss_dssp CCBCC--SCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCS----SEE-E--CTTSC---EEETTCCGGGC
T ss_pred CcceE--eCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCc----eEE-E--ccCCC---EEEEecchhhC
Confidence 43221 122344578999999999987 67789999987655421110 000 0 00000 11111222223
Q ss_pred eeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCC--ceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC
Q psy12422 156 ITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLT--DKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS 233 (356)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~ 233 (356)
+.|.|......... .......+.+ ..+|.+..... ...+.+|+.+.|.|.+.|+|.|.+.|+++|..+...
T Consensus 166 G~Y~C~~~n~~~~~--~~~~~~~~~v-----~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 238 (291)
T 2wim_A 166 GIYRCEGRVEARGE--IDFRDIIVIV-----NVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN 238 (291)
T ss_dssp EEEEEEEEETTTTE--EEEEEEEEEE-----EBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCT
T ss_pred EEEEEEEEECCCCe--eEEeeEEEEe-----ccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCC
Confidence 33333322211111 1112222333 33454444332 456889999999999999999999999999999877
Q ss_pred CceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCC
Q psy12422 234 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLN 281 (356)
Q Consensus 234 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~ 281 (356)
.++... .....|.|.+++.+|+|.|+|.|.|..|....++.|....
T Consensus 239 ~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 284 (291)
T 2wim_A 239 EKYILK--GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 284 (291)
T ss_dssp TTEEEC--STTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC--
T ss_pred ccEEEc--CCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEE
Confidence 655443 2335899999999999999999999999999999987543
No 34
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.97 E-value=2.5e-31 Score=221.76 Aligned_cols=250 Identities=14% Similarity=0.169 Sum_probs=163.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCC--eEEEEEeeCCCCCCeEEEEEEEeCCce---eEEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDG--VVSMEIIDCKPEDSGEYKCVATNKHGT---DETNCVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~--~~~L~i~~~~~~D~G~Y~C~a~n~~g~---~~~~~~l~v 75 (356)
|++++|.|.+.|. |+|+|+|..+.. ......++ ...|.|.+++.+|+|.|+|.|.|..|. ....+.|.|
T Consensus 15 G~~v~L~C~~~~~----v~W~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v 88 (289)
T 3mjg_X 15 SSTFVLTCSGSAP----VVWERMSQEPPQ--EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFV 88 (289)
T ss_dssp TCCEEEEEEESSC----CEEEBTTBCCSE--EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCEEEEEEC
T ss_pred CCcEEEEEeccce----EEEECCCCCccc--ceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEE
Confidence 7899999999874 999999998742 12223333 358999999999999999999998876 344556655
Q ss_pred eccccchhhhh--hcccccccCccceeeeccc-CCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCC
Q psy12422 76 ESEEESKEQQE--LAHNFLYSGDRKYIEKHIR-PAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSP 152 (356)
Q Consensus 76 ~~~~~~~~~~~--~~~~~~~~g~~~~l~c~~~-p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (356)
.++........ .....+.+|+.+.|.|.+. |.|.+.|++........... ..........+.+.|.|.+.+..
T Consensus 89 ~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~p~~~v~w~~~~~~~~~~~~~--~~~~~~~~~~d~G~Y~C~a~n~~-- 164 (289)
T 3mjg_X 89 PDPTVGFLPNDAEELFIFLTEITEITIPCRVTDPQLVVTLHEKKGDVALPVPY--DHQRGFSGIFEDRSYICKTTIGD-- 164 (289)
T ss_dssp CCTTCCBCCCCHHHHEEEESSCCCEEECCCBSCTTSCEEEEESSCCSCCCCCE--ETTTEEEECCCSSEEEEEEEETT--
T ss_pred ECCCcCcccCCCCcceEEeecCCeEEEEeEcCCCCceEEEEeCCCCCccceee--cCCcCeeeeccCcEEEEEEEeCC--
Confidence 54322221111 1124578999999999998 67789998875332221111 11111223445566666653211
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccC
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNS 232 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~ 232 (356)
....+....+.+.. ..+|.+...+....+.+|+++.|.|.+.|+|.|.+.|++++.....
T Consensus 165 -----------------~~~~s~~~~l~v~~---~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~ 224 (289)
T 3mjg_X 165 -----------------REVDSDAYYVYRLQ---VSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGR 224 (289)
T ss_dssp -----------------EEEECCCEEEEECC---CCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSC
T ss_pred -----------------ceeeeeeEEEEecC---CCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCC
Confidence 11111222333321 1456666666667899999999999999999999999987765433
Q ss_pred CCceeEEE-----eCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 233 SNILDLKY-----KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 233 ~~~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
........ ......|.|.+++.+|+|.|+|.|.|..|....++.|...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~ 277 (289)
T 3mjg_X 225 LVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINIT 277 (289)
T ss_dssp CCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred cccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEE
Confidence 22211111 1134689999999999999999999999999998888743
No 35
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=2.7e-30 Score=217.90 Aligned_cols=254 Identities=15% Similarity=0.169 Sum_probs=169.1
Q ss_pred CCceEEEEEe-ccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVG-STKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~-~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.. .+.|.+.|+|||+|.++... ++.+...++...|.|.+++.+|+|.|+|.|.|..|... ++.+.|...
T Consensus 16 g~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l~v~~~ 94 (312)
T 2y23_A 16 DGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLIDEEEL 94 (312)
T ss_dssp TCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEECHHHH
T ss_pred CCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEEEEeee
Confidence 6788898888 56899999999999999854 55556666777999999999999999999999888554 555555421
Q ss_pred c-----------cchhhhhhcccccccCccceeeeccc---CCceeeecccccccCCccccC----C-CCce-E---EEE
Q psy12422 79 E-----------ESKEQQELAHNFLYSGDRKYIEKHIR---PAPAIITTRQEIKSSYSSHTD----D-TGRT-T---TQM 135 (356)
Q Consensus 79 ~-----------~~~~~~~~~~~~~~~g~~~~l~c~~~---p~p~i~w~~~~~~~~~~~~~~----~-~~~~-~---~~~ 135 (356)
. +...........+.+|+.+.|.|.+. |.+.+.|++++..+....... . .... . ...
T Consensus 95 ~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~ 174 (312)
T 2y23_A 95 KRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQ 174 (312)
T ss_dssp HHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCC
T ss_pred eeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCC
Confidence 1 11111111255678999999999976 888899999877654321100 0 0000 0 001
Q ss_pred eeccccccccccccCCCccceeeeeeccccCCCCCcccccceeee-------c-------CCCCCCCCCeecccCCceee
Q psy12422 136 STLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELI-------M-------PPDTAMTPPQFANKLTDKTI 201 (356)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-------~~~~~~~~p~~~~~~~~~~v 201 (356)
..+.+.|.|...+... .......+. + .+.....+|.+.... ...+
T Consensus 175 ~~d~G~Y~C~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~v 233 (312)
T 2y23_A 175 DEDEGTYTFQLQDGKA--------------------TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEV 233 (312)
T ss_dssp GGGCEEEEEEEESSSC--------------------EEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-EEEE
T ss_pred cccCEeEEEEEEeCCc--------------------eEEEEEEEcchhhhhhcccccccccchhhccCCceeecc-eEEE
Confidence 2233444444321100 000000000 0 000002234444332 3678
Q ss_pred cCCCeEEEEEEEcCCCCC-eEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 202 DDGQCLDLSAVVKGDPEP-RVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 202 ~~g~~~~l~C~~~g~p~p-~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
.+|+.+.|.|.+.|.|+| .+.|+++|..+....++.+. .+...|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 234 ~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 309 (312)
T 2y23_A 234 TGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV 309 (312)
T ss_dssp ETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEEC
T ss_pred eCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEE
Confidence 999999999999999988 99999999998865554433 4457999999999999999999999999999998885
No 36
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=4.3e-30 Score=232.02 Aligned_cols=256 Identities=15% Similarity=0.124 Sum_probs=153.6
Q ss_pred CCceEEEEEeccCCCC--eeEEeeCCEEcccCCee---EEecCCe----EEEEEeeCCCCCCeEEEEEEEeCCceeEEEE
Q psy12422 1 MQNVIKVKVGSTKPPP--TVKWYKGNRELSKRDYS---MSYSDGV----VSMEIIDCKPEDSGEYKCVATNKHGTDETNC 71 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~--~v~W~k~g~~l~~~~~~---~~~~~~~----~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 71 (356)
|+++.|.|.+.|.|++ .|+|+|||+++...... ....++. ..|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 129 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 208 (523)
T 2rcj_C 129 ANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 208 (523)
T ss_pred CCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccce
Confidence 6789999999988764 89999999988654211 1123333 3699999999999999999999988776665
Q ss_pred EEEEecc-ccchhhh-hhcccccccCccceeeeccc---CCc-eeeecccccccCCccc---cCCCCceEEEEeeccccc
Q psy12422 72 VVIVESE-EESKEQQ-ELAHNFLYSGDRKYIEKHIR---PAP-AIITTRQEIKSSYSSH---TDDTGRTTTQMSTLSSNY 142 (356)
Q Consensus 72 ~l~v~~~-~~~~~~~-~~~~~~~~~g~~~~l~c~~~---p~p-~i~w~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 142 (356)
.+.+... ...+... ..+...+.+|+.+.|.|.+. |.| .+.|++++........ ....+... ..
T Consensus 209 ~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~-~~------- 280 (523)
T 2rcj_C 209 APTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYS-LS------- 280 (523)
T ss_pred eeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEE-EE-------
Confidence 5433211 1111111 11223457899999999985 556 7999998765422110 00111000 00
Q ss_pred cccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCee-cccCCcee-ecCCCeEEEEEEEcCCCC--
Q psy12422 143 SSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQF-ANKLTDKT-IDDGQCLDLSAVVKGDPE-- 218 (356)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~-v~~g~~~~l~C~~~g~p~-- 218 (356)
..+........+ +.|.|.+.+..+.. .....+.+ ...|.+ ...+.... +.+|+.+.|.|.+.|+|+
T Consensus 281 s~L~i~~~~~~d-G~Y~C~a~n~~g~~----~~~~~l~v-----~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~ 350 (523)
T 2rcj_C 281 SVVTVPSSSLGT-QTYICNVNHKPSNT----KVDKRVEP-----LSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHED 350 (523)
T ss_pred EEEEechhhcCC-ceEEEEEEeCCCCc----ceEEecCC-----CcCceEEecCCCchhhcccCCceEEEEEEecccCCC
Confidence 000111111122 33333332222211 11222222 122333 33333333 788999999999998764
Q ss_pred --CeEEEEECCEEccCCCceeE-EEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEE
Q psy12422 219 --PRVSWTKNGQPLNSSNILDL-KYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETK 274 (356)
Q Consensus 219 --p~i~W~~~g~~~~~~~~~~~-~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 274 (356)
+.|+|+|+|..+........ ...++ .+.|.|.++..+|+|.|+|.|.|..+.....
T Consensus 351 ~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 413 (523)
T 2rcj_C 351 PQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIE 413 (523)
T ss_pred CceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCcee
Confidence 48999999998875542211 11111 2469999999999999999999987765433
No 37
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=2.1e-30 Score=216.25 Aligned_cols=246 Identities=13% Similarity=0.117 Sum_probs=165.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 80 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 80 (356)
|+++.|.|.+.| .|+|+|+|..+ +..... + ..|.|.+++.+|+|.|+|.|.| |. ...+.|.|.+++.
T Consensus 27 G~~v~l~C~~~~----~i~W~~~~~~~----~~~~~~-~-~~L~i~~~~~~d~G~Y~C~~~n--g~-~~~~~l~V~~~~~ 93 (290)
T 2o26_X 27 GDTLSLTCIDPD----FVRWTFKTYFN----EMVENK-K-NEWIQEKAEATRTGTYTCSNSN--GL-TSSIYVFVRDPAK 93 (290)
T ss_dssp TSCEEEEEECTT----EEEEEEECSSS----CEEEEC-S-SEEEETTCCGGGCEEEEEEESS--SC-EEEEEEEEECSSC
T ss_pred CCcEEEEECCCC----cEEEecCCcce----eeecCC-C-ceEEEeccCHHhCeEEEEEeeC--Cc-cEEEEEEEeCCCc
Confidence 789999999987 89999999877 112222 2 4899999999999999999999 44 6778888886554
Q ss_pred chhhhhhcccccccCccceeeeccc-CC-ceeeec-ccccccCCcccc--CCCCceE--EEEeeccc-cccccccccCCC
Q psy12422 81 SKEQQELAHNFLYSGDRKYIEKHIR-PA-PAIITT-RQEIKSSYSSHT--DDTGRTT--TQMSTLSS-NYSSSTNNATSP 152 (356)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~c~~~-p~-p~i~w~-~~~~~~~~~~~~--~~~~~~~--~~~~~~~~-~~~~~~~~~~~~ 152 (356)
.. .......+.+|+.+.|.|.+. |. +.+.|+ +++..+...... ....... .....+.+ .|.|.+.+.
T Consensus 94 ~~--~~~~~~~~~~g~~v~l~C~~~~p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~--- 168 (290)
T 2o26_X 94 LF--LVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRD--- 168 (290)
T ss_dssp CB--CCCCCEEEETTSCEEECCCBSCCSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEET---
T ss_pred cc--ccccceEEecCCeEEEeCcCCCCCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEEC---
Confidence 43 334445677999999999988 66 779995 444333221110 0000000 01223334 455544321
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCe-EEEEECCEEc-
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPR-VSWTKNGQPL- 230 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-i~W~~~g~~~- 230 (356)
.....+....+.+.. ....+|.+...+....+.+|+.+.|.|.+.|.|.|. +.|+++|..+
T Consensus 169 ----------------~~~~~s~~~~l~V~~-~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~ 231 (290)
T 2o26_X 169 ----------------GTWLHSDKFTLKVRE-AIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQ 231 (290)
T ss_dssp ----------------TEEEECCCEEEEEEC-CCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEE
T ss_pred ----------------CceEEeEEEEEEEEe-CCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCc
Confidence 111112223333311 114678887777777899999999999999999997 9999988763
Q ss_pred ---cCCCceeEE---EeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCC
Q psy12422 231 ---NSSNILDLK---YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLN 281 (356)
Q Consensus 231 ---~~~~~~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~ 281 (356)
......... .......|.|.+++.+|+|.|+|.|.|..|.....+.|.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 288 (290)
T 2o26_X 232 HIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVE 288 (290)
T ss_dssp ECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred cceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEe
Confidence 322222111 112346899999999999999999999999999888887543
No 38
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.97 E-value=4.2e-32 Score=256.41 Aligned_cols=315 Identities=18% Similarity=0.236 Sum_probs=58.0
Q ss_pred CCceEEEEEecc--CCCCeeEEeeCCEEcccCCeeE---------EecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEE
Q psy12422 1 MQNVIKVKVGST--KPPPTVKWYKGNRELSKRDYSM---------SYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET 69 (356)
Q Consensus 1 g~~v~l~C~~~g--~p~~~v~W~k~g~~l~~~~~~~---------~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 69 (356)
|+++.|.|.+.+ .|.+.+.|+++|..+....... ........|.|.+++.+|+|.|+|.+.|..+..+.
T Consensus 239 G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 318 (772)
T 3v2a_R 239 GEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKN 318 (772)
T ss_dssp TCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEE
T ss_pred CCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeE
Confidence 789999999987 5567899999998765432111 11123458999999999999999999999998888
Q ss_pred EEEEEEeccccchhhh-hhcccccccCccceeeeccc--CCceeeecccccccCCccccC--CCCceEEEEeeccccccc
Q psy12422 70 NCVVIVESEEESKEQQ-ELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTD--DTGRTTTQMSTLSSNYSS 144 (356)
Q Consensus 70 ~~~l~v~~~~~~~~~~-~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 144 (356)
.+.|.|...+...... ......+.+|+.+.|.|.+. |.|.+.|++++..+....... ...........+.+.|.|
T Consensus 319 ~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~L~i~~v~~~d~G~Y~C 398 (772)
T 3v2a_R 319 STFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSERDTGNYTV 398 (772)
T ss_dssp EEEEEEECCCC---------------------------------------------------------------------
T ss_pred EEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEccceeEEEecCChhcCceEEE
Confidence 8999998765433222 12345678999999999987 778899998876654321111 111111223445566666
Q ss_pred cccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccC---CceeecCCCeEEEEEEEcCCCCCe-
Q psy12422 145 STNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL---TDKTIDDGQCLDLSAVVKGDPEPR- 220 (356)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~v~~g~~~~l~C~~~g~p~p~- 220 (356)
.+.+..... ..+....+.+ ..+|.+.... ....+.+|+.+.|.|.+.|.|.|.
T Consensus 399 ~a~n~~g~~------------------~~s~~~~l~v-----~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~ 455 (772)
T 3v2a_R 399 ILTNPISKE------------------KQSHVVSLVV-----YVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHH 455 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCcCe------------------EEEEEEEEEE-----ecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcE
Confidence 653322111 1112223333 3445443221 112478999999999999999997
Q ss_pred EEEEECCEE--------------------------------ccCCC-ceeEEE--eCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 221 VSWTKNGQP--------------------------------LNSSN-ILDLKY--KNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 221 i~W~~~g~~--------------------------------~~~~~-~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
+.|++++.. +.... ...... ......|.|.++ +|+|.|+|.|.
T Consensus 456 v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~ 533 (772)
T 3v2a_R 456 IHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAV 533 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEE
Confidence 999997432 11000 000000 111257888876 79999999999
Q ss_pred cCCCceEEEEEEecCCCCccc-------------------------eeEEeCC---------------------------
Q psy12422 266 NSLGTAETKCKLTPLNSSNIL-------------------------DLKYKNG--------------------------- 293 (356)
Q Consensus 266 n~~g~~~~~~~l~p~~~~~~~-------------------------~~~~~~~--------------------------- 293 (356)
|..|.....+.+.+...+.+. .+.|.++
T Consensus 534 N~~g~~~~~~~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (772)
T 3v2a_R 534 NKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLN 613 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccceeEEEEEECCceeeccCCcccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeecc
Confidence 999987776666522111110 2333221
Q ss_pred ----------eEEEEEecCCCCCCeEEEEEEEcCCcceE--EEEEEEE--EecCCCCCCCC
Q psy12422 294 ----------VASLQIQEVFPEDEGVYVCTATNSLGTAE--TKCKLTV--RSTPAANLGKS 340 (356)
Q Consensus 294 ----------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~V--~~~p~~~~~~~ 340 (356)
...|.|.+++.+|+|.|+|.|.|..|... ....|.| ..+|.+...+.
T Consensus 614 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~ 674 (772)
T 3v2a_R 614 ATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLE 674 (772)
T ss_dssp -------------------------------------------------------------
T ss_pred ceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCC
Confidence 12399999999999999999999655432 2344555 66777655443
No 39
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=1.4e-31 Score=228.47 Aligned_cols=264 Identities=17% Similarity=0.161 Sum_probs=181.6
Q ss_pred CCceEEEEEec-------cCCCCeeEEeeCCEEc--ccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE
Q psy12422 1 MQNVIKVKVGS-------TKPPPTVKWYKGNREL--SKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN 70 (356)
Q Consensus 1 g~~v~l~C~~~-------g~p~~~v~W~k~g~~l--~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 70 (356)
|+++.|.|.+. +.|.+.|+|+|+|..+ ... ...+...++ +|.|.+++.+|+|.|+|.+.|..|.....
T Consensus 33 G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~ 110 (339)
T 3o4o_C 33 GEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDSGTYVCTTRNASYCDKMS 110 (339)
T ss_dssp TBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCCEEEECCEEETTEEEEEE
T ss_pred CccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccCEEEEEEEECCcceEEEE
Confidence 78999999997 8999999999999884 333 333444555 79999999999999999999999988899
Q ss_pred EEEEEeccccchhhhhhcccccccCccceeeec-----cc--CCceeeecccccccCCcccc--CCCCceEEEEeecccc
Q psy12422 71 CVVIVESEEESKEQQELAHNFLYSGDRKYIEKH-----IR--PAPAIITTRQEIKSSYSSHT--DDTGRTTTQMSTLSSN 141 (356)
Q Consensus 71 ~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~-----~~--p~p~i~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 141 (356)
+.|.|...+............+.+|+.+.|.|. .. |.+.+.|++++..+...... ......
T Consensus 111 ~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~---------- 180 (339)
T 3o4o_C 111 IELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTT---------- 180 (339)
T ss_dssp EEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSS----------
T ss_pred EEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcc----------
Confidence 999998776554334444457889999999999 44 67889999987665432111 000000
Q ss_pred ccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE---cCCC-
Q psy12422 142 YSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV---KGDP- 217 (356)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~---~g~p- 217 (356)
.+........+.+.|.|......+...........+.+.......+|.+...+....+.+|+.+.|.|.+ .|+|
T Consensus 181 --~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~ 258 (339)
T 3o4o_C 181 --HLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPL 258 (339)
T ss_dssp --EEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCS
T ss_pred --eEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCC
Confidence 0111112223333344433333222222233344444433333456777777777889999999999999 9999
Q ss_pred CCeEEEEECCEEccCC---------CceeEEEeCC---EEEEEEccCCCCCC-eEEEEEEEcCCCceEEEEEEe
Q psy12422 218 EPRVSWTKNGQPLNSS---------NILDLKYKNG---VASLQIQEVFPEDE-GVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 218 ~p~i~W~~~g~~~~~~---------~~~~~~~~~~---~~~L~i~~v~~~d~-G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
++.+.|+++|..+... ........+. .+.|.|.+++.+|+ |.|+|.|.|..|...+.+.+.
T Consensus 259 ~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~ 332 (339)
T 3o4o_C 259 TTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVK 332 (339)
T ss_dssp SCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCC
T ss_pred CceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhh
Confidence 8889999999876432 1111111121 12799999999997 999999999999888766654
No 40
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.97 E-value=3.5e-31 Score=231.37 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=178.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEccc---CCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeE-EEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSK---RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE-TNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~---~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~-~~~~l~v~ 76 (356)
|+++.|.|.+.|.|.+.++|+|+|..+.. ........++ .|.|.+++.+|+|.|+|.+.|..+... ..+.+.|.
T Consensus 136 G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~ 213 (403)
T 3laf_A 136 GDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSG--ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRIL 213 (403)
T ss_dssp TSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTS--CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEE
T ss_pred CCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCc--eEEEcccccccCEEEEEEEEcCCCceeccceeEEEe
Confidence 78999999999999999999999988843 2222333344 799999999999999999999877643 45667776
Q ss_pred ccccchhh----hhhcccccccCccceeeeccc--CCceeeecccccccCCccccC--CCCceEE---EEeecccccccc
Q psy12422 77 SEEESKEQ----QELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTD--DTGRTTT---QMSTLSSNYSSS 145 (356)
Q Consensus 77 ~~~~~~~~----~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~ 145 (356)
..+..... .......+.+|+.+.|.|.+. |.|.+.|++++..+....... ....... ....+.|.|.|.
T Consensus 214 ~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 293 (403)
T 3laf_A 214 SDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCV 293 (403)
T ss_dssp CCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEE
T ss_pred cCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEE
Confidence 54432211 112234567999999999987 788899999876553221110 0000000 112233444444
Q ss_pred ccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEE
Q psy12422 146 TNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK 225 (356)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~ 225 (356)
+. ... ........+.+ ..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++
T Consensus 294 a~----------------n~~----g~~~~~~~l~V-----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~ 348 (403)
T 3laf_A 294 VT----------------YKN----ENISASAELTV-----LVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMK 348 (403)
T ss_dssp EE----------------ETT----EEEEEEEEEEE-----EEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEE
T ss_pred EE----------------cCC----CceEEEEEEEE-----ECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEE
Confidence 32 211 11223334444 456777777778889999999999999999999999999
Q ss_pred CCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCC
Q psy12422 226 NGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNS 282 (356)
Q Consensus 226 ~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~ 282 (356)
+|..+......... .+ ..|.|.+++.+|+|.|+|.|.|..|....++.|.+..+
T Consensus 349 ~g~~~~~~~~~~~~-~~--~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P 402 (403)
T 3laf_A 349 NGDVVIPSDYFQIV-GG--SNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKP 402 (403)
T ss_dssp TTEECCCSSSEEEE-TT--TEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred CCEECCCCCcEEEe-cC--ccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCC
Confidence 99998776655433 22 37999999999999999999999999999998875543
No 41
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.97 E-value=2.4e-30 Score=224.42 Aligned_cols=249 Identities=19% Similarity=0.299 Sum_probs=170.3
Q ss_pred CCceEEEEEe-ccCCCCeeEEeeCCEEcccCCeeEE-ecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE---EEEEE
Q psy12422 1 MQNVIKVKVG-STKPPPTVKWYKGNRELSKRDYSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN---CVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~-~g~p~~~v~W~k~g~~l~~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~---~~l~v 75 (356)
|+++.|.|.+ .+.|.+.+.|++++.++........ ..++ .|.|.+++.+|+|.|+|.|.|..+..... ..+.+
T Consensus 117 G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v 194 (384)
T 3kld_A 117 GQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETG--NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLIL 194 (384)
T ss_dssp TCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTC--CEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEE
T ss_pred CCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCC--cEEEeecCHHHCceEEEEEecccccceeeCCceEEEE
Confidence 6889999976 3567789999999998865433332 2333 79999999999999999999987765321 22222
Q ss_pred ecc------ccchhhhhhcccccccCccceeeeccc--CCceeeecccccccCCcccc-CCCCceE---EEEeecccccc
Q psy12422 76 ESE------EESKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHT-DDTGRTT---TQMSTLSSNYS 143 (356)
Q Consensus 76 ~~~------~~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~ 143 (356)
... .+...........+.+|+.+.|.|.+. |.|.+.|++++......... ....... .....+.|.|.
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 274 (384)
T 3kld_A 195 RNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYE 274 (384)
T ss_dssp EEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEE
T ss_pred ccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEE
Confidence 211 000001111233467899999999987 88899999865533222111 1111111 11233445566
Q ss_pred ccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEE
Q psy12422 144 SSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSW 223 (356)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W 223 (356)
|.+.+..+. ......+.+ ..+|.+...+.+..+.+|+++.|.|.+.|.|.|.|.|
T Consensus 275 C~a~N~~G~--------------------~~~~~~l~v-----~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W 329 (384)
T 3kld_A 275 CVAENSRGK--------------------NVAKGQLTF-----YAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRW 329 (384)
T ss_dssp EEEEETTEE--------------------EEEEEEEEE-----EEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEE
T ss_pred EEEEcCCCe--------------------EEEEEEEEE-----ecCCccccCCCceEecCCCCEEEEeECCccCCCeEEE
Confidence 555433221 112233333 4457777777788899999999999999999999999
Q ss_pred EECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 224 TKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 224 ~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
++||..+....++.+ .++ +|.|.+++.+|+|.|+|.|.|..|...+++.|.+.
T Consensus 330 ~k~g~~l~~~~~~~~--~~~--~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 330 LKNGDPLLTRDRIQI--EQG--TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp EETTEECCCBTTEEE--ETT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EECCEECCCCccEEE--eCC--EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 999999987666543 344 89999999999999999999999999998888643
No 42
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.97 E-value=1.3e-29 Score=198.56 Aligned_cols=170 Identities=30% Similarity=0.500 Sum_probs=145.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC---CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~---~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.+.++|+|+|..+... ++.....++...|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 20 G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~ 99 (194)
T 2a38_A 20 GSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKA 99 (194)
T ss_dssp TSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEcc
Confidence 789999999999999999999999988754 45566677778999999999999999999999999888877777763
Q ss_pred cccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
.
T Consensus 100 ~------------------------------------------------------------------------------- 100 (194)
T 2a38_A 100 E------------------------------------------------------------------------------- 100 (194)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD 237 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~ 237 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+.....+.
T Consensus 101 -----------------------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~ 151 (194)
T 2a38_A 101 -----------------------------TAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQ 151 (194)
T ss_dssp -----------------------------CEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEE
T ss_pred -----------------------------CCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEE
Confidence 122333333445678899999999999999999999999999998887777
Q ss_pred EEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 238 LKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 238 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
....+...+|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 152 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 192 (194)
T 2a38_A 152 ISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELL 192 (194)
T ss_dssp EEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEE
Confidence 77777778999999999999999999999999988887765
No 43
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.97 E-value=9.7e-31 Score=220.94 Aligned_cols=261 Identities=15% Similarity=0.147 Sum_probs=172.5
Q ss_pred CCceEEEEEeccCC-CCeeEEeeCCEEccc---CCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKP-PPTVKWYKGNRELSK---RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p-~~~v~W~k~g~~l~~---~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
|+++.|.|.+.+.| .+.|+|||+|..+.. ....+...++ .|.|.+++.+|+|.|+|.|.|..|.....+.+.+.
T Consensus 20 G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~ 97 (315)
T 1itb_B 20 NEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKE--KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 97 (315)
T ss_dssp TSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSS--BEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEE
T ss_pred CCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCC--eEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEe
Confidence 78999999998887 789999999875431 1122233334 79999999999999999999998887776666655
Q ss_pred ccccchh--hhhhcccccccCccceeeecc------c--CCceeeecccccccCCccccCC-CCceEE---EEeeccccc
Q psy12422 77 SEEESKE--QQELAHNFLYSGDRKYIEKHI------R--PAPAIITTRQEIKSSYSSHTDD-TGRTTT---QMSTLSSNY 142 (356)
Q Consensus 77 ~~~~~~~--~~~~~~~~~~~g~~~~l~c~~------~--p~p~i~w~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~ 142 (356)
..++... ........+.+|+.+.|.|.+ . |.|.+.|++++..+........ ...... ....+.+.|
T Consensus 98 ~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y 177 (315)
T 1itb_B 98 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNY 177 (315)
T ss_dssp CCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEE
T ss_pred CCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEeceehhCcEE
Confidence 4332221 111223457889999999986 3 7788999998876643211100 000000 122233444
Q ss_pred cccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCc-eeecCCCeEEEEEEEcCCCCCeE
Q psy12422 143 SSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTD-KTIDDGQCLDLSAVVKGDPEPRV 221 (356)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~v~~g~~~~l~C~~~g~p~p~i 221 (356)
.|.+.+ ...+. .........+.+.......+|.+...+.. ..+.+|+.+.|.|.+.|+|.|.+
T Consensus 178 ~C~a~~---------------n~~g~-~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i 241 (315)
T 1itb_B 178 TCHASY---------------TYLGK-QYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIA 241 (315)
T ss_dssp EEEEEE---------------EETTE-EEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEE
T ss_pred EEEEEc---------------CCCCc-EEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCee
Confidence 444321 11111 11111122222211122466777766643 57899999999999999999999
Q ss_pred EEEECCEEccCCCceeE----EEeC--------CEEEEEEccCCCCC-CeEEEEEEEcCCCceEEEEEEec
Q psy12422 222 SWTKNGQPLNSSNILDL----KYKN--------GVASLQIQEVFPED-EGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 222 ~W~~~g~~~~~~~~~~~----~~~~--------~~~~L~i~~v~~~d-~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
.|+++|..+........ .... ..+.|.|.+++.+| +|.|+|.|.|..|....++.|..
T Consensus 242 ~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v 312 (315)
T 1itb_B 242 YWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 312 (315)
T ss_dssp EEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEEC
T ss_pred EEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEe
Confidence 99999999986543211 1111 23589999999999 99999999999999999888863
No 44
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=219.42 Aligned_cols=255 Identities=14% Similarity=0.103 Sum_probs=167.3
Q ss_pred CCceEEEEEecc-CCCCeeEEeeCCEEccc------C----------CeeEE---ecCCeEEEEEeeCCCCCCeEEEEEE
Q psy12422 1 MQNVIKVKVGST-KPPPTVKWYKGNRELSK------R----------DYSMS---YSDGVVSMEIIDCKPEDSGEYKCVA 60 (356)
Q Consensus 1 g~~v~l~C~~~g-~p~~~v~W~k~g~~l~~------~----------~~~~~---~~~~~~~L~i~~~~~~D~G~Y~C~a 60 (356)
|++++|.|.+.+ .|.+.|+|+|++..... . +..+. ...+..+|+|.+++.+|+|.|+|.|
T Consensus 14 G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a 93 (308)
T 4fom_A 14 GKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKYICKA 93 (308)
T ss_dssp TSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCEEEEEEE
T ss_pred CCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCEEEEEEE
Confidence 899999999854 45567999996432210 0 00011 1123357999999999999999999
Q ss_pred EeC-CceeEEEEEEEEeccccchhhhhhcccccccCccceeeeccc---CCceeeecccccccCCccccCCCCceEEE--
Q psy12422 61 TNK-HGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIR---PAPAIITTRQEIKSSYSSHTDDTGRTTTQ-- 134 (356)
Q Consensus 61 ~n~-~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~---p~p~i~w~~~~~~~~~~~~~~~~~~~~~~-- 134 (356)
.|. .|..+..+.+.+...+..............+|+.+.+.|.+. |.|.+.|++++..+...............
T Consensus 94 ~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~ 173 (308)
T 4fom_A 94 VTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQ 173 (308)
T ss_dssp EETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEE
T ss_pred eeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeeccccccc
Confidence 986 667777777777766544433333444567788999999753 88899999988776543322222211110
Q ss_pred ------EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccC-CceeecCCCeE
Q psy12422 135 ------MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL-TDKTIDDGQCL 207 (356)
Q Consensus 135 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~v~~g~~~ 207 (356)
...+.+.|.|.+.+.. .... ......+.+ ..+|.+...+ ....+.+|+.+
T Consensus 174 l~i~~~~~~d~g~Y~C~a~n~~----------------~~~~--~~~~~~l~V-----~~~P~~~~~~~~~~~~~~g~~v 230 (308)
T 4fom_A 174 YKLFPTRFARGRRITCVVKHPA----------------LEKD--IRYSFILDI-----QYAPEVSVTGYDGNWFVGRKGV 230 (308)
T ss_dssp EEECCCGGGTTCEEEEEEECTT----------------CSSC--EEEEEECCC-----CEEEEECCBCCCSCEETTCCSC
T ss_pred ceEEeeeecCCccEEEEEEccC----------------CCCc--eEEeEEEEE-----ecCCeeEEcccceeeeeccccE
Confidence 1122344444443221 1111 111222222 3455554433 45667889999
Q ss_pred EEEEEEcCCCCC-eEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCC
Q psy12422 208 DLSAVVKGDPEP-RVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSS 283 (356)
Q Consensus 208 ~l~C~~~g~p~p-~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~ 283 (356)
+|.|.+.|+|+| .+.|+|++..+..... ..+...|.|.+++.+|+|.|+|.|.|..|....++.|.+..+|
T Consensus 231 ~l~C~~~g~P~p~~v~W~k~~~~~~~~~~-----~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P 302 (308)
T 4fom_A 231 NLKCNADANPPPFKSVWSRLDGQWPDGLL-----ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPP 302 (308)
T ss_dssp EEECCEEEESCEEEEECCBSSSCCCSSCB-----CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC
T ss_pred EEEEEEecCCCCcEEEEEECCeECCCcEE-----EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCC
Confidence 999999999998 5999999887765421 1233467899999999999999999999999998888755544
No 45
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=2.8e-30 Score=221.33 Aligned_cols=261 Identities=15% Similarity=0.154 Sum_probs=144.4
Q ss_pred CCceEEEEEeccCCC-----------CeeEEeeCCE------Ecc--cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPP-----------PTVKWYKGNR------ELS--KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 61 (356)
Q Consensus 1 g~~v~l~C~~~g~p~-----------~~v~W~k~g~------~l~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 61 (356)
|+++.|.|.+.+.|. +.|+|||++. ++. .....+...++ .|.|.+++.+|+|.|+|.|.
T Consensus 22 G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~D~G~Y~C~a~ 99 (349)
T 4dep_C 22 DEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKD--VLWFRPTLLNDTGNYTCMLR 99 (349)
T ss_dssp TSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETT--EEEESSCCGGGCEEEEEEEE
T ss_pred CCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCC--EEEEccCChhhCEEEEEEEe
Confidence 799999999987664 8999999883 222 11222333444 79999999999999999999
Q ss_pred eCCceeEEEEEEEEeccccchhhhh--hcccccccCccceeeecc-------cCCceeeecccccccCCccccCCCCceE
Q psy12422 62 NKHGTDETNCVVIVESEEESKEQQE--LAHNFLYSGDRKYIEKHI-------RPAPAIITTRQEIKSSYSSHTDDTGRTT 132 (356)
Q Consensus 62 n~~g~~~~~~~l~v~~~~~~~~~~~--~~~~~~~~g~~~~l~c~~-------~p~p~i~w~~~~~~~~~~~~~~~~~~~~ 132 (356)
|..+.....+.|.|...+....... .....+.+|+.+.|.|.. .|.|.+.|++++..+.........+...
T Consensus 100 n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~~~~~L 179 (349)
T 4dep_C 100 NTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGMNL 179 (349)
T ss_dssp CSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEEETTEE
T ss_pred cCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceeecCCEE
Confidence 9999988889999987543322211 223457899999999974 4888999999877653321111111111
Q ss_pred ---EEEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCC-CCCCCeecccCCce--eecCCCe
Q psy12422 133 ---TQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDT-AMTPPQFANKLTDK--TIDDGQC 206 (356)
Q Consensus 133 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~--~v~~g~~ 206 (356)
.....+.|.|.|.+.+.. +...........+.+.... ...+|.+....... .+.+|+.
T Consensus 180 ~i~~v~~~d~G~Y~C~a~n~~----------------~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~ 243 (349)
T 4dep_C 180 SFLIALISNNGNYTCVVTYPE----------------NGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEE 243 (349)
T ss_dssp EEESCCGGGCEEEEEEEEEEE----------------TTEEEEEEEEEEEEEECCGGGCCSCEEC---------------
T ss_pred EEeeeeecCCcEEEEEEEEee----------------CCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCc
Confidence 112333455555543321 1111111223333331110 02256666555332 7889999
Q ss_pred EEEEEEEc----CCCCCeEEEEECCEEccC-CCceeEEE-------eC--CEEEEEEccCCCCCC-eEEEEEEEcCCCce
Q psy12422 207 LDLSAVVK----GDPEPRVSWTKNGQPLNS-SNILDLKY-------KN--GVASLQIQEVFPEDE-GVYVCTATNSLGTA 271 (356)
Q Consensus 207 ~~l~C~~~----g~p~p~i~W~~~g~~~~~-~~~~~~~~-------~~--~~~~L~i~~v~~~d~-G~Y~C~a~n~~g~~ 271 (356)
+.|.|.+. |.|.|.+.|+++|..+.. ..++.... .+ ...+|.|.+++.+|+ |.|+|.|.|..|..
T Consensus 244 v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~ 323 (349)
T 4dep_C 244 LLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEV 323 (349)
T ss_dssp -CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEE
T ss_pred EEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcE
Confidence 99999998 678999999999988765 22221100 11 134599999999999 99999999999999
Q ss_pred EEEEEEec
Q psy12422 272 ETKCKLTP 279 (356)
Q Consensus 272 ~~~~~l~p 279 (356)
...+.|.+
T Consensus 324 ~~~~~l~v 331 (349)
T 4dep_C 324 AKAAKVKQ 331 (349)
T ss_dssp EEECC---
T ss_pred EEEEEEee
Confidence 88887764
No 46
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.97 E-value=3e-29 Score=212.94 Aligned_cols=258 Identities=13% Similarity=0.033 Sum_probs=164.6
Q ss_pred CCceEEEEEeccC---------CCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCe-EEEEEEEeCCceeEEE
Q psy12422 1 MQNVIKVKVGSTK---------PPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSG-EYKCVATNKHGTDETN 70 (356)
Q Consensus 1 g~~v~l~C~~~g~---------p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y~C~a~n~~g~~~~~ 70 (356)
|+++.|.|.+.+. |.+.|+|||+|..+...... ..++ +|.|.+++.+|+| .|+|.|.|..|.....
T Consensus 44 G~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~~~~--~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~ 119 (329)
T 3oq3_B 44 GEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--VKNG--DLWIANYTSNDSHRRYLCTVTTKNGDCVQG 119 (329)
T ss_dssp TSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--EETT--EEEESSCCGGGGGCCEEEEEECTTSCEEEE
T ss_pred CCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce--eecc--eEEEcCCChHhCCCcEEEEEEeCCCceeeE
Confidence 8999999999774 66899999999877643222 2334 8999999999999 9999999998776555
Q ss_pred EEEEEeccccchhhhhhcccccccCccceeeeccc--C-CceeeecccccccCCccccC-CCCceEEEEeeccccccccc
Q psy12422 71 CVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIR--P-APAIITTRQEIKSSYSSHTD-DTGRTTTQMSTLSSNYSSST 146 (356)
Q Consensus 71 ~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~--p-~p~i~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 146 (356)
..+.|...++. .........+.+|+.+.|.|.+. | .|.+.|++++..+....... ..... ..
T Consensus 120 ~~~~v~~~~p~-~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~-------------L~ 185 (329)
T 3oq3_B 120 IVRSHIRKPPS-CIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQN-------------LI 185 (329)
T ss_dssp EEEEEECCCCS-CEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTE-------------EE
T ss_pred EEEEEEcCCCc-EeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCE-------------EE
Confidence 44344433222 11111223467899999999887 5 67899999887663211100 00000 11
Q ss_pred cccCCCccceeeeeecccc--CCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCC---CC-e
Q psy12422 147 NNATSPSKKITRRMNSILD--TDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDP---EP-R 220 (356)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p---~p-~ 220 (356)
.......+.+.|.|..... .+...........+.+........|.+ .+....+.+|+.+.|.|.+.|.| +| .
T Consensus 186 I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~--~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~ 263 (329)
T 3oq3_B 186 IHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI--LDPKINVTIGEPANITCTAVSTSLLVDDVL 263 (329)
T ss_dssp ECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE--CCSEEEECTTSCEEEEEEEEETTCCTTCCE
T ss_pred EeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee--cCCeeEEecCCCEEEEEEEEECCCCCCCcE
Confidence 1112223333333333322 222222222223344421110111333 55668899999999999999998 77 8
Q ss_pred EEEEECCEEc-cCCCceeEE--EeC--CEEEEEEccCCCCCCe-EEEEEEEcCCCceEEEEEEe
Q psy12422 221 VSWTKNGQPL-NSSNILDLK--YKN--GVASLQIQEVFPEDEG-VYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 221 i~W~~~g~~~-~~~~~~~~~--~~~--~~~~L~i~~v~~~d~G-~Y~C~a~n~~g~~~~~~~l~ 278 (356)
+.|+++|..+ ......... ... ....|.|.+++.+|+| .|+|.|.|..|....++.|.
T Consensus 264 v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~ 327 (329)
T 3oq3_B 264 IDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVV 327 (329)
T ss_dssp EEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEE
T ss_pred EEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEE
Confidence 8999999874 333322211 122 3468999999999999 99999999999988887764
No 47
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.97 E-value=1.7e-28 Score=192.61 Aligned_cols=172 Identities=22% Similarity=0.404 Sum_probs=141.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC--CeeEE-ecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR--DYSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~--~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.+.++|||+|..+... ++... ..++...|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 19 G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~ 98 (197)
T 2j8h_A 19 QSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEV 98 (197)
T ss_dssp TSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcC
Confidence 789999999999999999999999998753 33332 456677999999999999999999999999888888888864
Q ss_pred cccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
++..
T Consensus 99 ~p~~---------------------------------------------------------------------------- 102 (197)
T 2j8h_A 99 PAKI---------------------------------------------------------------------------- 102 (197)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred CCcC----------------------------------------------------------------------------
Confidence 3210
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD 237 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~ 237 (356)
..|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+....++.
T Consensus 103 ------------------------------~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~ 152 (197)
T 2j8h_A 103 ------------------------------HLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQ 152 (197)
T ss_dssp ------------------------------CCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCE
T ss_pred ------------------------------CCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEE
Confidence 01111122334578899999999999999999999999999998777777
Q ss_pred EEEeCCEEEEEEcc-CCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 238 LKYKNGVASLQIQE-VFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 238 ~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
+........|.|.+ ++.+|+|.|+|.|.|..|....++.|.
T Consensus 153 ~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 194 (197)
T 2j8h_A 153 VIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELD 194 (197)
T ss_dssp EEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEE
Confidence 76667778999999 999999999999999999988887775
No 48
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.97 E-value=9.1e-30 Score=199.57 Aligned_cols=163 Identities=13% Similarity=0.100 Sum_probs=121.5
Q ss_pred CCceEEEEE---eccCCCCeeEEeeCCEEccc------------------CCeeEEecCCeEEEEEeeCCCCCCeEEEEE
Q psy12422 1 MQNVIKVKV---GSTKPPPTVKWYKGNRELSK------------------RDYSMSYSDGVVSMEIIDCKPEDSGEYKCV 59 (356)
Q Consensus 1 g~~v~l~C~---~~g~p~~~v~W~k~g~~l~~------------------~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 59 (356)
|++++|.|. +.+.|.+.|+|||+|..+.. ..+......+...|.|.+++.+|+|.|+|.
T Consensus 8 Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 87 (203)
T 4fa8_A 8 GERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGNYLCR 87 (203)
T ss_dssp TCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeEEEEE
Confidence 899999995 57889999999998743321 123334455677999999999999999999
Q ss_pred EEeCCceeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecc
Q psy12422 60 ATNKHGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLS 139 (356)
Q Consensus 60 a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (356)
|.|..|.....+.|.|..+
T Consensus 88 a~n~~g~~~~~~~l~V~~p------------------------------------------------------------- 106 (203)
T 4fa8_A 88 MKLGETEVTKQEHLSVVKP------------------------------------------------------------- 106 (203)
T ss_dssp EEETTEEEEEEEEEEEEEE-------------------------------------------------------------
T ss_pred EEcCCCcEEEEEEEEecCC-------------------------------------------------------------
Confidence 9999999988888888643
Q ss_pred ccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCC
Q psy12422 140 SNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEP 219 (356)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p 219 (356)
|.+...+....+.+|+.++|.|.+.|+|.|
T Consensus 107 --------------------------------------------------~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P 136 (203)
T 4fa8_A 107 --------------------------------------------------LTLSVHSERSQFPDFSVLTVTCTVNAFPHP 136 (203)
T ss_dssp --------------------------------------------------EEEEEEEEECCSSCSCCEEEEEEEEEESCC
T ss_pred --------------------------------------------------ceeeecceeEEEcCCCEEEEEEEcCCCCCC
Confidence 222222334457789999999999999999
Q ss_pred eEEEEECCEEccC----CCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEE
Q psy12422 220 RVSWTKNGQPLNS----SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK 274 (356)
Q Consensus 220 ~i~W~~~g~~~~~----~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 274 (356)
.|.|++++..+.. ..++....++....|.|.+++.+|+|.|+|.|.|..|.++..
T Consensus 137 ~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 137 HVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp EEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred EEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 9999986654432 223333334445667788999999999999999999988764
No 49
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.96 E-value=2.8e-29 Score=206.60 Aligned_cols=236 Identities=17% Similarity=0.191 Sum_probs=155.8
Q ss_pred CCceEEEEEecc-CCCC--eeEEeeCCEEcccCCeeEEecCCeEEEEEeeC---CCCCCeE--EEEEEEeCCceeEEEEE
Q psy12422 1 MQNVIKVKVGST-KPPP--TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDC---KPEDSGE--YKCVATNKHGTDETNCV 72 (356)
Q Consensus 1 g~~v~l~C~~~g-~p~~--~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~---~~~D~G~--Y~C~a~n~~g~~~~~~~ 72 (356)
|++++|.|.+.| .|.| .|+|||+|..+.. .+...++ .|.+..+ +.+|+|. |+|.+.|..|..+..+.
T Consensus 18 G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~---~~~~~~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~ 92 (265)
T 2oz4_A 18 DTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP---TVTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQT 92 (265)
T ss_dssp TEEEEEEEEEESCSCGGGCEEEEEETTEECCC---EEEECSS--EEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEccCCCCCcceEEEEEeCCEECCc---eEeeCCC--eEEEEeecccccccCCcceEEEEEecCCCCcEEEEE
Confidence 789999999988 8877 9999999999864 2333344 4444444 7788885 99999999999888899
Q ss_pred EEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCC
Q psy12422 73 VIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSP 152 (356)
Q Consensus 73 l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (356)
|.|...+.+ ........+.+|+.+.|.|.+.|.|.+.| ++..+.... .............+.+.|.|.+.+..
T Consensus 93 l~V~~~p~p--~~~~~~~~v~~G~~v~l~C~~~p~~~i~W--~g~~~~~~~-~~~~l~i~~~~~~~~g~Y~C~a~n~~-- 165 (265)
T 2oz4_A 93 VTIYSFPAP--NVILTKPEVSEGTEVTVKCEAHPRAKVTL--NGVPAQPLG-PRAQLLLKATPEDNGRSFSCSATLEV-- 165 (265)
T ss_dssp EEEECCCCC--EEEESCSEEETTCEEEEEEECCTTSEEEE--SSCSSSCCS-SEECCEEECCGGGTTEEEEEEEEEEC--
T ss_pred EEEeCCCCc--eeecCCceecCCCcEEEEEEccCCCEEEE--CCEEccCCC-CcEEEEEccccccCCceEEEEEEcCC--
Confidence 999764431 12234455788999999999999999999 433331110 00000000111122233555543111
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeeccc--CCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEc
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANK--LTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPL 230 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~ 230 (356)
.+.....+....+.+ ..+|.+... +....+.+|+.+.|.|.+.|+|.|.+.|+++|..+
T Consensus 166 --------------~g~~~~~s~~~~l~V-----~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~ 226 (265)
T 2oz4_A 166 --------------AGQLIHKNQTRELRV-----LYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFP 226 (265)
T ss_dssp --------------SSSEEEEEEEEEEEE-----EEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEE
T ss_pred --------------CCCcccccccEEEEE-----EeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCccc
Confidence 111111112233333 334444332 45678999999999999999999999999988732
Q ss_pred cCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 231 NSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 231 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
... + .+ ..++.+|+|.|+|.|.|..|.....+.|.+.
T Consensus 227 ~~~---------g--~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 227 LPI---------G--ES--VTVTRDLEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp CCT---------T--SC--EECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCC---------C--cE--EEeehhhCeEEEEEEECCCCcEEEEEEEEEe
Confidence 221 1 12 2488899999999999999999988887643
No 50
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.96 E-value=2.7e-29 Score=213.19 Aligned_cols=253 Identities=12% Similarity=0.146 Sum_probs=151.9
Q ss_pred CCceEEEEEeccC-CCCeeEEeeCCEEcc----c------CCeeEEe-----cCCeEEEEEeeCCCCCCeEEEEEEEeCC
Q psy12422 1 MQNVIKVKVGSTK-PPPTVKWYKGNRELS----K------RDYSMSY-----SDGVVSMEIIDCKPEDSGEYKCVATNKH 64 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~~v~W~k~g~~l~----~------~~~~~~~-----~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 64 (356)
|+++.|.|.+.+. |.+.|+|||++.++. . .++.... ..+..+|.|.+++.+|+|.|+|.|.|..
T Consensus 18 G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 97 (327)
T 2wng_A 18 GESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRKG 97 (327)
T ss_dssp TSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEESS
T ss_pred CCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEeecCC
Confidence 7899999999887 889999999875432 0 0111111 1344589999999999999999999986
Q ss_pred cee-----EEEEEEEEeccccchhhhhhcccccccCccceeeeccc--CCc--eeeecccccccCCcccc---CCCCceE
Q psy12422 65 GTD-----ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIR--PAP--AIITTRQEIKSSYSSHT---DDTGRTT 132 (356)
Q Consensus 65 g~~-----~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p--~i~w~~~~~~~~~~~~~---~~~~~~~ 132 (356)
+.. ...+.|.|...+..+... .+...+.+|+.+.|.|.+. |.| .+.|++++..+...... .......
T Consensus 98 ~~~~~~~~~~~~~l~V~~~p~~p~i~-~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~ 176 (327)
T 2wng_A 98 SPDTEFKSGAGTELSVRAKPSAPVVS-GPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSY 176 (327)
T ss_dssp TTCEEEEECCCEEEEEEBCCCCCEEE-CCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCE
T ss_pred CcceeEeecCcEEEEEEecCCCceee-ccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCce
Confidence 532 234677787655443222 2335678999999999987 444 79999987666433211 0000000
Q ss_pred EE--------Ee-eccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecC
Q psy12422 133 TQ--------MS-TLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDD 203 (356)
Q Consensus 133 ~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~ 203 (356)
.. .. .+.+.|.|.+.+...... .........+.+ ..+|.+...+.. +.+
T Consensus 177 ~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~---------------~~~~~~~~~~~v-----~~~P~i~~~~~~--~~~ 234 (327)
T 2wng_A 177 SIHSTAKVVLTREDVHSQVICEVAHVTLQGD---------------PLRGTANLSETI-----RVPPTLEVTQQP--VRA 234 (327)
T ss_dssp EEEEEEEEECCTTGGGCEEEEEEECTTSCSC---------------CEEEEEEGGGTB-----CBCCEEEEEEEC--CSS
T ss_pred EEEEEEEEechhcCcCceEEEEEeccccCCC---------------cccceEEecccc-----CCCCEEEEecCC--cCC
Confidence 00 00 112444444433221110 001111111122 456766655433 789
Q ss_pred CCeEEEEEEEcCCC-CC-eEEEEECCEEccCCCceeEEEe-CC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 204 GQCLDLSAVVKGDP-EP-RVSWTKNGQPLNSSNILDLKYK-NG----VASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 204 g~~~~l~C~~~g~p-~p-~i~W~~~g~~~~~~~~~~~~~~-~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
|+.+.|.|.+.|.| ++ .+.|++||..+........... .+ ...|.|..+..+|+|.|+|.|.|..+.......
T Consensus 235 G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~ 314 (327)
T 2wng_A 235 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSH 314 (327)
T ss_dssp TTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEE
T ss_pred CCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhhe
Confidence 99999999999854 44 7999999998864322111211 12 146899999999999999999999997654433
No 51
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.96 E-value=2.2e-29 Score=219.98 Aligned_cols=250 Identities=15% Similarity=0.219 Sum_probs=171.9
Q ss_pred CCceEEEEEe-ccCCCCeeEEeeCCEE-cccCCeeEEecCCeEEEEEeeCCCCC-CeEEEEEEEeCCceeEE---EEEEE
Q psy12422 1 MQNVIKVKVG-STKPPPTVKWYKGNRE-LSKRDYSMSYSDGVVSMEIIDCKPED-SGEYKCVATNKHGTDET---NCVVI 74 (356)
Q Consensus 1 g~~v~l~C~~-~g~p~~~v~W~k~g~~-l~~~~~~~~~~~~~~~L~i~~~~~~D-~G~Y~C~a~n~~g~~~~---~~~l~ 74 (356)
|+++.|.|.+ .+.|.+.++|+|++.. +..........++ .|.|.+++.+| +|.|+|.|.|..|.... .+.+.
T Consensus 131 G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~ 208 (404)
T 3p3y_A 131 GAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNG--DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLK 208 (404)
T ss_dssp TSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTS--CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEE
T ss_pred CCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCC--cEEEEeeeeccCCcceEEEEEeccccceeccCceeEE
Confidence 7899999999 8899999999998744 3333333334445 69999999999 59999999998776432 24555
Q ss_pred Eeccccc----hhh----hhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCC-CceEE---EEeeccc
Q psy12422 75 VESEEES----KEQ----QELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDT-GRTTT---QMSTLSS 140 (356)
Q Consensus 75 v~~~~~~----~~~----~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~ 140 (356)
|...... +.. .......+.+|+.+.|.|.+. |.|.+.|++++..+......... ..... ....+.|
T Consensus 209 v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 288 (404)
T 3p3y_A 209 VLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSG 288 (404)
T ss_dssp EECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCE
T ss_pred EeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCE
Confidence 5432111 110 011234578999999999987 67789999987766432211000 00000 1222334
Q ss_pred cccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCe
Q psy12422 141 NYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPR 220 (356)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~ 220 (356)
.|.|.+.+.. + .......+.+ ..+|.+...+....+.+|+.+.|.|.+.|+|.|.
T Consensus 289 ~Y~C~a~n~~----------------g----~~~~~~~l~V-----~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~ 343 (404)
T 3p3y_A 289 EYFCLASNKM----------------G----SIRHTISVRV-----KAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 343 (404)
T ss_dssp EEEEEEECSS----------------C----EEEEEEEEEE-----EEEEEEEECCCCEEECTTCCEEEECEEEEESCCE
T ss_pred EEEEEEEeCC----------------C----cEEEEEEEEE-----eCCCeeeccCCcceeecCCcEEEEEEccccCCCc
Confidence 4444432221 1 1223344444 4567777777888999999999999999999999
Q ss_pred EEEEECCEEccCCCc-eeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEec
Q psy12422 221 VSWTKNGQPLNSSNI-LDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 221 i~W~~~g~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
+.|+++|..+..... ......++ +|.|.+++.+|+|.|+|.|.|..|....++.|.+
T Consensus 344 v~W~~~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 401 (404)
T 3p3y_A 344 VQWMVNGEPLQSAPPNPNREVAGD--TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSV 401 (404)
T ss_dssp EEEEETTEEGGGSCCCTTEEEETT--EEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEECCEecCCCCCCceEEecCC--EEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEE
Confidence 999999999876532 22333344 8999999999999999999999999998888764
No 52
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.96 E-value=3.5e-29 Score=217.56 Aligned_cols=250 Identities=17% Similarity=0.192 Sum_probs=165.1
Q ss_pred CCceEEEEEeccCCC---CeeEEeeCCEEccc-----CCeeEEecCCeEEEEEeeCCCCCC-eEEEEEEEeCCceeEE-E
Q psy12422 1 MQNVIKVKVGSTKPP---PTVKWYKGNRELSK-----RDYSMSYSDGVVSMEIIDCKPEDS-GEYKCVATNKHGTDET-N 70 (356)
Q Consensus 1 g~~v~l~C~~~g~p~---~~v~W~k~g~~l~~-----~~~~~~~~~~~~~L~i~~~~~~D~-G~Y~C~a~n~~g~~~~-~ 70 (356)
|+++.|.|.+.+.|. +.++|+|++..+.. ........++ .|.|.+++.+|+ |.|+|.+.|..+.... .
T Consensus 118 G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~ 195 (388)
T 2v5m_A 118 GNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSG--ELHIREVGPEDGYKSYQCRTKHRLTGETRLS 195 (388)
T ss_dssp TSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTS--CEEESSCCGGGGGCCEEEEEEETTTCCEEEC
T ss_pred CCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCC--cEEEecCCccccCeeEEEEeccCCCCceeec
Confidence 789999999987653 78999999877632 1122233344 799999999999 9999999998543322 1
Q ss_pred ---EEEEEecccc----chhhhhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCCCceEEEEeecccc
Q psy12422 71 ---CVVIVESEEE----SKEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSN 141 (356)
Q Consensus 71 ---~~l~v~~~~~----~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (356)
..|.|..+.. ...........+.+|+.+.|.|.+. |.|.+.|+++..............+.... .+
T Consensus 196 ~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~----~~- 270 (388)
T 2v5m_A 196 ATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQV----SG- 270 (388)
T ss_dssp SSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEE----TT-
T ss_pred cccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecc----cC-
Confidence 3455554311 1111112234578899999999987 88889999975433221111111111000 00
Q ss_pred ccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeE
Q psy12422 142 YSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRV 221 (356)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i 221 (356)
.+........+.+.|.|......+ .......+.+ ..+|.+...+....+.+|+.+.|.|.+.|+|.|.+
T Consensus 271 --~L~i~~v~~~d~G~Y~C~a~n~~g----~~~~~~~l~V-----~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i 339 (388)
T 2v5m_A 271 --TLIIKDAVVEDSGKYLCVVNNSVG----GESVETVLTV-----TAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTV 339 (388)
T ss_dssp --EEEESSCCGGGCEEEEEEEECSSC----EEEEEEEEEE-----EEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEE
T ss_pred --EEEECcCCHHHCeEEEEEEecCCC----ceeEEEEEEE-----eCCCccccCCCcEEecCCCCEEEEEEeccccCCeE
Confidence 011112223333344443332222 1223334444 44566666677888999999999999999999999
Q ss_pred EEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 222 SWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 222 ~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
.|+++|..+.... ..|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 340 ~W~~~g~~i~~~~----------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 386 (388)
T 2v5m_A 340 SWMKDGKAIGHSE----------SVLRIESVKKEDKGMYQCFVRNDRESAEASAELK 386 (388)
T ss_dssp EEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred EEEECCEECccCC----------CEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEE
Confidence 9999999886432 3799999999999999999999999999888775
No 53
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=193.93 Aligned_cols=183 Identities=19% Similarity=0.288 Sum_probs=131.7
Q ss_pred CCceEEEEEec-cCCCCeeEEeeCCEEcccC-CeeEEecC--CeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 1 MQNVIKVKVGS-TKPPPTVKWYKGNRELSKR-DYSMSYSD--GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~-g~p~~~v~W~k~g~~l~~~-~~~~~~~~--~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
|+.+.|.|.+. +.|.|.|+|||||+++..+ ++.+.... +..+|.|.+++.+|+|.|+|.|.| |.+.....+.+.
T Consensus 17 g~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~~~~~~~ 94 (207)
T 3rbs_A 17 KGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATNHSTVVLV 94 (207)
T ss_dssp GGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEEEEEEEEC
T ss_pred CCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEEEEEEEEE
Confidence 67899999995 5899999999999999754 44444433 677899999999999999999999 455544444332
Q ss_pred ccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccce
Q psy12422 77 SEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKI 156 (356)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (356)
............. .+. .|
T Consensus 95 ~~~~~~~~~~~~~-~~~-----------------~~-------------------------------------------- 112 (207)
T 3rbs_A 95 GDVFKKLQKEAEF-QRQ-----------------EW-------------------------------------------- 112 (207)
T ss_dssp THHHHHHHHHHHH-HHH-----------------HH--------------------------------------------
T ss_pred ccchhhhcccccc-ccc-----------------cc--------------------------------------------
Confidence 2100000000000 000 00
Q ss_pred eeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCC-CCCeEEEEECCEEccCCCc
Q psy12422 157 TRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGD-PEPRVSWTKNGQPLNSSNI 235 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~p~i~W~~~g~~~~~~~~ 235 (356)
+ ...+|.+...+ ...+.+|+.+.|.|.+.|. |.|.++|+|||..+....+
T Consensus 113 ----------------------~------~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~ 163 (207)
T 3rbs_A 113 ----------------------I------RKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK 163 (207)
T ss_dssp ----------------------H------HHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCC
T ss_pred ----------------------c------cCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCc
Confidence 0 01245554444 3678899999999999998 9999999999999976554
Q ss_pred eeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 236 LDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 236 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
+ ....+..+|.|.+++.+|+|.|+|.|.|..|.+..++.|.
T Consensus 164 ~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~ 204 (207)
T 3rbs_A 164 H--DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV 204 (207)
T ss_dssp C--CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEC
T ss_pred e--EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEe
Confidence 3 2234456899999999999999999999999999998885
No 54
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=1.1e-28 Score=205.67 Aligned_cols=257 Identities=14% Similarity=0.124 Sum_probs=166.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 80 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 80 (356)
|++++|.|.+.+ .|+|++++.... ......+...|+|.+++.+|+|.|+|.+.|..+.....+.|.|.+++.
T Consensus 19 G~~v~L~C~~~~----~v~W~~~~~~~~----~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~ 90 (289)
T 3ejj_X 19 GETVTLRCVSNG----SVEWDGPISPYW----TLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAH 90 (289)
T ss_dssp TCCEEEEEECSS----CCEEECSCSSSS----EECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSC
T ss_pred CCCEEEEEEeCC----cEEEccCCCceE----EEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCc
Confidence 789999999977 499998764321 222333445899999999999999999999988888889999987654
Q ss_pred chhhhhhcccccccCccceeeeccc--CCce-eeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 81 SKEQQELAHNFLYSGDRKYIEKHIR--PAPA-IITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~-i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
... .......+.+|+.+.|.|.+. +.+. +.|++.+......... . .. ...+. .........+.+.
T Consensus 91 ~~~-~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~-----~-~~--~~~~~---L~i~~v~~~d~G~ 158 (289)
T 3ejj_X 91 SWN-LLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTV-----Y-FF--SPWRG---FIIRKAKVLDSNT 158 (289)
T ss_dssp SEE-ESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCC-----E-EE--ETTTE---EEESSCCGGGCEE
T ss_pred cee-cccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCcc-----E-EE--CCCCC---EEEeecccccCEE
Confidence 422 222455678999999999987 3333 9998754433211110 0 00 00000 1111122222333
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-CCCCeEEEEECCEEccCCCce
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG-DPEPRVSWTKNGQPLNSSNIL 236 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p~p~i~W~~~g~~~~~~~~~ 236 (356)
|.|.... ...........+.+... ...+|.+...+....+.+|+.+.|.|.+.+ .|.|.+.|+++|..+......
T Consensus 159 Y~C~a~~---~~~~~~~~~~~l~V~~~-~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 234 (289)
T 3ejj_X 159 YVCKTMV---NGRESTSTGIWLKVNRV-HPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNS 234 (289)
T ss_dssp EEEEEEE---TTEEEECCCEEEEEESS-CCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEE
T ss_pred EEEEEEe---CCCccccccEEEEEEEC-CCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCc
Confidence 3333221 11122223334444211 135788888887788889999999999988 799999999999988754322
Q ss_pred eEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCC
Q psy12422 237 DLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLN 281 (356)
Q Consensus 237 ~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~ 281 (356)
.... ......|.|.+++.+|+|.|+|.|.|..|...+++.|....
T Consensus 235 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~ 281 (289)
T 3ejj_X 235 DFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVE 281 (289)
T ss_dssp EECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC-
T ss_pred ccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEe
Confidence 2110 01145899999999999999999999999999999987443
No 55
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.96 E-value=1.6e-28 Score=207.03 Aligned_cols=250 Identities=15% Similarity=0.177 Sum_probs=162.2
Q ss_pred CCceEEEEEeccCCCC-----eeEEeeCCEEcc-------------cC-CeeEEe-----cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKPPP-----TVKWYKGNRELS-------------KR-DYSMSY-----SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~-----~v~W~k~g~~l~-------------~~-~~~~~~-----~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.+.|.+ .|+|+|+|.... .. ++.... ..+..+|+|.+++.+|+|.|
T Consensus 15 G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 94 (313)
T 4fqp_A 15 GDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNY 94 (313)
T ss_dssp TSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGCEEE
T ss_pred CCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhCEEE
Confidence 8999999999887665 489999875421 11 111100 11234799999999999999
Q ss_pred EEEEEe-CCceeEEEEEEEEeccccchhhhhhcccccccCccceeeeccc---CCceeeecccccccCCccccC--CCCc
Q psy12422 57 KCVATN-KHGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIR---PAPAIITTRQEIKSSYSSHTD--DTGR 130 (356)
Q Consensus 57 ~C~a~n-~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~---p~p~i~w~~~~~~~~~~~~~~--~~~~ 130 (356)
+|.+.+ ..+.....+.|.+...+... .......+.+++...+.|.+. |.|.+.|+++........... ..+.
T Consensus 95 ~C~v~~~~~~~~~~~~~l~v~~~P~~~--~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~ 172 (313)
T 4fqp_A 95 TCLFVTFPQGSRSVDIWLRVLAKPQNT--AEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGT 172 (313)
T ss_dssp EEEEECSSSCEEEEEEEECCBBCCEEE--EEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTC
T ss_pred EEEEeeccCcceeeeeeeeeccCCcce--ecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccc
Confidence 999864 46666677777666543322 222334466788888888764 888999999876654322111 1111
Q ss_pred eEE---E-----EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeeccc-CCceee
Q psy12422 131 TTT---Q-----MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANK-LTDKTI 201 (356)
Q Consensus 131 ~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~v 201 (356)
... . ...+.+.|.|.+.+.. ... .......+.+ ..+|.+... .....+
T Consensus 173 ~~~~s~l~i~~~~~~d~g~Y~C~a~n~~----------------~~~--~~~~~~~l~V-----~~~P~v~~~~~~~~~~ 229 (313)
T 4fqp_A 173 VTVTSLWILVPSSQVDGKNVTCKVEHES----------------FEK--PQLLTVNLTV-----YYPPEVSISGYDNNWY 229 (313)
T ss_dssp EEEEEEEEECCCGGGTTCEEEEEEECTT----------------SSS--CEEEEEECCB-----CEEEEEEEECCCSCEE
T ss_pred cccceeeeecccccccCeeEEEEEEccC----------------cCc--cceeeeeccc-----ccCCccccccccceee
Confidence 100 0 0112234444432211 111 1112222333 445666443 355567
Q ss_pred cCCCeEEEEEEEcCCCCC-eEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 202 DDGQCLDLSAVVKGDPEP-RVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 202 ~~g~~~~l~C~~~g~p~p-~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
.+|+.++|.|.+.|+|.| .|+|+++|..+.... ...++ +|.|.+++.+|+|.|+|.|.|..|....++.|.+.
T Consensus 230 ~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~----~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 230 LGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA----VAQGA--QLLIRPVDKPINTTLICNVTNALGARQAELTVQVK 303 (313)
T ss_dssp TTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE----EEETT--EEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCCCeEEEEEEecCCCCCcEEEEEECCEECCCce----EEeCC--EEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 789999999999999999 599999998886542 22333 79999999999999999999999999998888754
Q ss_pred C
Q psy12422 281 N 281 (356)
Q Consensus 281 ~ 281 (356)
.
T Consensus 304 ~ 304 (313)
T 4fqp_A 304 E 304 (313)
T ss_dssp C
T ss_pred e
Confidence 3
No 56
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.96 E-value=8.3e-28 Score=190.97 Aligned_cols=169 Identities=22% Similarity=0.407 Sum_probs=134.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEE-e-cCCeEEEEEeeCC-CCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMS-Y-SDGVVSMEIIDCK-PEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~-~-~~~~~~L~i~~~~-~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.+.|+|+|+|..+...+.... . ......|.|.+++ .+|+|.|+|.|.|..|.....+.|.|..
T Consensus 21 G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 100 (212)
T 2yd6_A 21 GGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLR 100 (212)
T ss_dssp TSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEec
Confidence 78999999999999999999999999986654332 2 2345689999994 9999999999999999988888888864
Q ss_pred cccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
.+..+
T Consensus 101 ~~~~~--------------------------------------------------------------------------- 105 (212)
T 2yd6_A 101 EDQIP--------------------------------------------------------------------------- 105 (212)
T ss_dssp GGGCC---------------------------------------------------------------------------
T ss_pred cCccC---------------------------------------------------------------------------
Confidence 31100
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC---C
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS---N 234 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~---~ 234 (356)
...|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+... .
T Consensus 106 -----------------------------~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~ 156 (212)
T 2yd6_A 106 -----------------------------RGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNG 156 (212)
T ss_dssp -----------------------------TTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------C
T ss_pred -----------------------------CCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCc
Confidence 12344555555667889999999999999999999999999998754 3
Q ss_pred ceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEE
Q psy12422 235 ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAET 273 (356)
Q Consensus 235 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 273 (356)
++..........|.|.+++.+|+|.|+|.|.|..|....
T Consensus 157 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s 195 (212)
T 2yd6_A 157 RIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYS 195 (212)
T ss_dssp CEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred eEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcccc
Confidence 344444456689999999999999999999999997654
No 57
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=201.99 Aligned_cols=199 Identities=19% Similarity=0.247 Sum_probs=146.1
Q ss_pred CCceEEEEEeccCCCC-eeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPP-TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~-~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.+.|.+ .++|+|+|..+.... ..|.|.+++.+|+|.|+|.+.|..+.. .+.|.|...
T Consensus 16 G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~---------~~l~i~~~~~~d~G~Y~C~~~~~~~s~--~~~l~v~~~- 83 (262)
T 3rjd_A 16 EETVTLHCEVLHLPGSSSTQWFLNGTATQTST---------PSYRITSASVNDSGEYRCQRGLSGRSD--PIQLEIHRG- 83 (262)
T ss_dssp TCCEEEEEECSSCCCTTCEEEEETTEECSCCS---------SEEEESSCCGGGCEEEEEEESSSCCCC--CEEEEEECS-
T ss_pred CCeEEEEEECCCCCCCceEEEEECCEEeeccC---------CeEEEecCCcccCeEEEEEEecCCccc--cEEEEEecc-
Confidence 7899999999999888 999999999886431 279999999999999999998765433 344444321
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
T Consensus 84 -------------------------------------------------------------------------------- 83 (262)
T 3rjd_A 84 -------------------------------------------------------------------------------- 83 (262)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE-cCCCCCeEEEEECCEEccCCCceeE
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV-KGDPEPRVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~~~~~~~~~~ 238 (356)
+ +...+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+...
T Consensus 84 ------------------------------~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~----- 127 (262)
T 3rjd_A 84 ------------------------------W-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF----- 127 (262)
T ss_dssp ------------------------------S-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----
T ss_pred ------------------------------c-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc-----
Confidence 0 0111123457789999999999 78888999999999887422
Q ss_pred EEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC---CCCccc-----------------------------
Q psy12422 239 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL---NSSNIL----------------------------- 286 (356)
Q Consensus 239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~---~~~~~~----------------------------- 286 (356)
... ..|.|.+++.+|+|.|+|.|.|..+.....+.+... ..+.+.
T Consensus 128 -~~~--~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~ 204 (262)
T 3rjd_A 128 -HWN--SNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQ 204 (262)
T ss_dssp -EEC--CCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----
T ss_pred -CCC--CeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCcc
Confidence 112 379999999999999999999999776665555421 111110
Q ss_pred -eeEEeC---------CeEEEEEecCCCCCCeEEEEEEEcCCcceEE---EEEEEEE
Q psy12422 287 -DLKYKN---------GVASLQIQEVFPEDEGVYVCTATNSLGTAET---KCKLTVR 330 (356)
Q Consensus 287 -~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~---~~~l~V~ 330 (356)
.+.|.+ ....|.|.+++.+|+|.|+|.|.|..|.... .+.|.|+
T Consensus 205 ~~~~w~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l~V~ 261 (262)
T 3rjd_A 205 LYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVL 261 (262)
T ss_dssp EEEEEEETTEEEEEEESCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEECEE
T ss_pred EEEEEEeCCcEecccCCCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEEEEe
Confidence 134433 3457999999999999999999999997532 4555554
No 58
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.96 E-value=1.4e-27 Score=186.26 Aligned_cols=162 Identities=27% Similarity=0.357 Sum_probs=133.7
Q ss_pred CCceEEEEEeccCCC--CeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPP--PTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~--~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.+.|. +.++|+|+|..+....... ....|.|.+++.+|+|.|+|.+.|. +.....+.|.|..+
T Consensus 18 G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~~~ 92 (190)
T 2wv3_A 18 LLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA----SNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVKAA 92 (190)
T ss_dssp SSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC----SEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEECC
T ss_pred CceEEEEEEeccCCCCceEEEEEECCEECcccceEe----ccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEecC
Confidence 789999999988887 7899999999997654322 4468999999999999999999999 88777777777532
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
T Consensus 93 -------------------------------------------------------------------------------- 92 (190)
T 2wv3_A 93 -------------------------------------------------------------------------------- 92 (190)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEE--CCEEcc---CC
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK--NGQPLN---SS 233 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~--~g~~~~---~~ 233 (356)
|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++ +|..+. ..
T Consensus 93 -------------------------------p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~ 141 (190)
T 2wv3_A 93 -------------------------------PDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSS 141 (190)
T ss_dssp -------------------------------CEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTT
T ss_pred -------------------------------CcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCC
Confidence 333333445678899999999999999999999999 887765 34
Q ss_pred CceeEEEeCCEEEEEEccCC-CCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 234 NILDLKYKNGVASLQIQEVF-PEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 234 ~~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
.++.+...+...+|.|.+++ .+|+|.|+|.|.|..|....++.|.
T Consensus 142 ~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 187 (190)
T 2wv3_A 142 GRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLR 187 (190)
T ss_dssp SCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEE
T ss_pred CeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEE
Confidence 55666666666799999999 7999999999999999988887775
No 59
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.96 E-value=2.1e-29 Score=218.59 Aligned_cols=247 Identities=21% Similarity=0.312 Sum_probs=169.2
Q ss_pred CCceEEEEEe-ccCCCCeeEEeeCCEEcc--cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEE-----EEE
Q psy12422 1 MQNVIKVKVG-STKPPPTVKWYKGNRELS--KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET-----NCV 72 (356)
Q Consensus 1 g~~v~l~C~~-~g~p~~~v~W~k~g~~l~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~-----~~~ 72 (356)
|+++.|.|.+ .+.|.+.++|+|++.++. ........ .....|.|.+++.+|+|.|+|.+.|..|.... .+.
T Consensus 116 G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~ 194 (382)
T 1cs6_A 116 GWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVS-QTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQ 194 (382)
T ss_dssp TSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEEC-TTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEE
T ss_pred CCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEe-cCceEEEEEeeCcccCeeEEEEEEEccccccceeEcccee
Confidence 7899999996 567889999999987753 22222222 22237999999999999999999997743322 244
Q ss_pred EEEeccc--c-chh--hhhhcccccccCccceeeeccc--CCceeeecccccccCCccccCCCCceEE---EEeeccccc
Q psy12422 73 VIVESEE--E-SKE--QQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTDDTGRTTT---QMSTLSSNY 142 (356)
Q Consensus 73 l~v~~~~--~-~~~--~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 142 (356)
|.|.... . .+. ........+.+|+.+.|.|.+. |.|.+.|++++...... ......... ....+.+.|
T Consensus 195 l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y 272 (382)
T 1cs6_A 195 LSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK--WLSSEPLLHIQNVDFEDEGTY 272 (382)
T ss_dssp EEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC--CSBSSSEEEECSCCGGGCEEE
T ss_pred eccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE--EecCCcEEEEccCChhhCEEE
Confidence 5443210 0 111 1112245678999999999986 77889999987664321 000111111 122334455
Q ss_pred cccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEE
Q psy12422 143 SSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVS 222 (356)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~ 222 (356)
.|.+.+... .......+.+ ..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.
T Consensus 273 ~C~a~n~~g--------------------~~~~~~~l~V-----~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~ 327 (382)
T 1cs6_A 273 ECEAENIKG--------------------RDTYQGRIII-----HAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVR 327 (382)
T ss_dssp EEEEEETTE--------------------EEEEEEEEEE-----EEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEE
T ss_pred EEEEEcCCC--------------------eEEEEEEEEE-----ecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEE
Confidence 555432221 1122333444 455777777777889999999999999999999999
Q ss_pred EEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEec
Q psy12422 223 WTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 223 W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
|+++|..+....++.. .++ .|.|.+++.+|+|.|+|.|.|..|....++.|.+
T Consensus 328 W~~~g~~~~~~~~~~~--~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 380 (382)
T 1cs6_A 328 WLRDGQPLASQNRIEV--SGG--ELRFSKLVLEDSGMYQCVAENKHGTVYASAELTV 380 (382)
T ss_dssp EEETTEECCCCSSEEE--ETT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCEECCCCceEEE--ECC--EEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEE
Confidence 9999999987765543 333 8999999999999999999999999998888753
No 60
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.96 E-value=1.3e-28 Score=217.75 Aligned_cols=250 Identities=15% Similarity=0.134 Sum_probs=150.6
Q ss_pred CCceEEEEEeccCC--CCeeEEeeC--CEEcc------------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKG--NRELS------------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~--g~~l~------------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.+.+ .+.|.|||+ |..+. ..++.... ..+..+|.|.+++.+|+|.|
T Consensus 15 G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 94 (444)
T 1igt_B 15 GGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMY 94 (444)
T ss_dssp TCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCHHHCEEE
Confidence 78999999998764 578999985 33210 12333322 24567999999999999999
Q ss_pred EEEEEeCCce---eEEEEEEEEecccc-chhhh-hhcccccccCccceeeeccc---CCc-eeeecccccccCCcccc--
Q psy12422 57 KCVATNKHGT---DETNCVVIVESEEE-SKEQQ-ELAHNFLYSGDRKYIEKHIR---PAP-AIITTRQEIKSSYSSHT-- 125 (356)
Q Consensus 57 ~C~a~n~~g~---~~~~~~l~v~~~~~-~~~~~-~~~~~~~~~g~~~~l~c~~~---p~p-~i~w~~~~~~~~~~~~~-- 125 (356)
.|.+.|..+. ....+.|.|..... .+... ..+...+.+|+.+.|.|.+. |.| .+.|++++.........
T Consensus 95 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~ 174 (444)
T 1igt_B 95 YCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAV 174 (444)
T ss_dssp EEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCE
T ss_pred EEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCcc
Confidence 9999997654 22346777764221 11111 11222347899999999985 666 89999987653211000
Q ss_pred CCCCceEE----EEe----eccccccccccccCCCccceeeeeeccccCCCCCcccccceeeec-------------CCC
Q psy12422 126 DDTGRTTT----QMS----TLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIM-------------PPD 184 (356)
Q Consensus 126 ~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 184 (356)
...+.... ... .+ +.|.|.+.+...... ....+.+ ...
T Consensus 175 ~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~--------------------~~~~i~~~~~~~~~~~~~~~~~~ 233 (444)
T 1igt_B 175 LQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK--------------------VDKKIEPRGPTIKPCPPCKCPAP 233 (444)
T ss_dssp EETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEE--------------------EEEECCCCCCSCCCCCCCSCCCS
T ss_pred ccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcc--------------------eEEEeccCCCCcccCCccccCCc
Confidence 00010000 000 12 445555443322210 0111110 001
Q ss_pred CCCCCCee-cccCCcee-ecCCCeEEEEEEEcCCC----CCeEEEEECCEEccCCCcee-EEEeC----CEEEEEEccCC
Q psy12422 185 TAMTPPQF-ANKLTDKT-IDDGQCLDLSAVVKGDP----EPRVSWTKNGQPLNSSNILD-LKYKN----GVASLQIQEVF 253 (356)
Q Consensus 185 ~~~~~p~~-~~~~~~~~-v~~g~~~~l~C~~~g~p----~p~i~W~~~g~~~~~~~~~~-~~~~~----~~~~L~i~~v~ 253 (356)
....+|.+ ..++.... +.+|+++.|.|.+.|.| .+.|.|+++|..+....... ....+ ..+.|.|.+++
T Consensus 234 ~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 313 (444)
T 1igt_B 234 NLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQD 313 (444)
T ss_dssp CCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHH
T ss_pred ccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHH
Confidence 11235554 33333333 58999999999998874 35899999998876432211 11111 23589999999
Q ss_pred CCCCeEEEEEEEcCCCce
Q psy12422 254 PEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~g~~ 271 (356)
.+|+|.|+|.|.|..+..
T Consensus 314 ~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 314 WMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp HHTTCEEEEEEECTTCSS
T ss_pred hccCCcEEEEEEcCCCCC
Confidence 999999999999998876
No 61
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.96 E-value=2.2e-27 Score=197.35 Aligned_cols=167 Identities=27% Similarity=0.441 Sum_probs=143.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.|.|.+.+.|+|+|..+... .+......+...|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 114 g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~- 192 (284)
T 2rik_A 114 DEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEP- 192 (284)
T ss_dssp TCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECC-
T ss_pred CceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecC-
Confidence 788999999999999999999999998754 344555666779999999999999999999999998888888877532
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
T Consensus 193 -------------------------------------------------------------------------------- 192 (284)
T 2rik_A 193 -------------------------------------------------------------------------------- 192 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEE
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLK 239 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~ 239 (356)
|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+....++.+.
T Consensus 193 ------------------------------p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~ 242 (284)
T 2rik_A 193 ------------------------------PVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIM 242 (284)
T ss_dssp ------------------------------CBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEE
T ss_pred ------------------------------CcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEE
Confidence 22222334456788999999999999999999999999999988888777
Q ss_pred EeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 240 YKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 240 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
..+....|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 243 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 281 (284)
T 2rik_A 243 SENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSIT 281 (284)
T ss_dssp EETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEE
Confidence 777778999999999999999999999999998888775
No 62
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.96 E-value=1e-27 Score=190.46 Aligned_cols=190 Identities=18% Similarity=0.272 Sum_probs=140.9
Q ss_pred CCceEEEEEeccC-CCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTK-PPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
++.+.|.|.+.+. |.+.|+|||+|.++... ++.+...++...|.|.+++.+|+|.|+|.+.|..|.....+.|.|...
T Consensus 17 ~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~ 96 (212)
T 2r15_A 17 AEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAY 96 (212)
T ss_dssp SSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHH
T ss_pred CceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeec
Confidence 3556777777664 68899999999999764 455556667778999999999999999999999888777666665432
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
..............
T Consensus 97 ~~~~~~~~~~~~~~------------------------------------------------------------------ 110 (212)
T 2r15_A 97 DEAYAEFQRLKQAA------------------------------------------------------------------ 110 (212)
T ss_dssp HHHHHHHHHHHHHH------------------------------------------------------------------
T ss_pred cchhhhccccCccc------------------------------------------------------------------
Confidence 11110000000000
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeE
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~ 238 (356)
+.. ...++.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+....++.+
T Consensus 111 --------------------~~~----~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~ 166 (212)
T 2r15_A 111 --------------------IAE----KNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNL 166 (212)
T ss_dssp --------------------HHH----HHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEE
T ss_pred --------------------ccc----cCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEE
Confidence 000 01223333345567899999999999999999999999999999988777766
Q ss_pred EEe-CCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 239 KYK-NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 239 ~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
... +....|.|.+++.+|+|.|+|.|.|..|.....+.|.+.
T Consensus 167 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 167 KFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp EEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 665 567899999999999999999999999999888877643
No 63
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=1.1e-28 Score=209.71 Aligned_cols=250 Identities=15% Similarity=0.150 Sum_probs=164.5
Q ss_pred CCceEEEEEeccC----CCCeeEEeeCC--EE-------------c-cc--CCeeEE-ecCCeEEEEEeeCCCCCCeEEE
Q psy12422 1 MQNVIKVKVGSTK----PPPTVKWYKGN--RE-------------L-SK--RDYSMS-YSDGVVSMEIIDCKPEDSGEYK 57 (356)
Q Consensus 1 g~~v~l~C~~~g~----p~~~v~W~k~g--~~-------------l-~~--~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~ 57 (356)
|++++|.|.+.+. |.+.+.|+|++ .. + .. .++... ...+..+|.|.+++.+|+|.|+
T Consensus 29 G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 108 (331)
T 3u83_A 29 GTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYI 108 (331)
T ss_dssp TCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCCGGGCEEEE
T ss_pred cCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccCcccCcEEE
Confidence 7899999999776 45579999954 21 1 11 121111 1223457999999999999999
Q ss_pred EE-EEeCCceeEEEEEEEEeccccchhhhhhcccccccC---ccceeeec-cc--CCceeeecccccccCCcccc-CCCC
Q psy12422 58 CV-ATNKHGTDETNCVVIVESEEESKEQQELAHNFLYSG---DRKYIEKH-IR--PAPAIITTRQEIKSSYSSHT-DDTG 129 (356)
Q Consensus 58 C~-a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g---~~~~l~c~-~~--p~p~i~w~~~~~~~~~~~~~-~~~~ 129 (356)
|. +.+..|.....+.|.|...+............+.+| +.+.|.|. .. |.|.+.|+++.......... ....
T Consensus 109 C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~ 188 (331)
T 3u83_A 109 CEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNG 188 (331)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTS
T ss_pred EEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCC
Confidence 98 566678888889999987655433333344456777 77999997 43 88899999853222111111 1111
Q ss_pred ceEE--E------EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecc-cCCcee
Q psy12422 130 RTTT--Q------MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFAN-KLTDKT 200 (356)
Q Consensus 130 ~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~ 200 (356)
.... . ...+.+.|.|.+.+... .......+.+ ..+|.+.. .+....
T Consensus 189 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~--------------------~~~~~~~l~V-----~~~P~~~~~~~~~~~ 243 (331)
T 3u83_A 189 TVTVISRYRLVPSREAHQQSLACIVNYHMD--------------------RFKESLTLNV-----QYEPEVTIEGFDGNW 243 (331)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEEETTE--------------------EEEEEEECCE-----EEEEEEEEECCCSCC
T ss_pred cEEEEEEEEEEeccccCCCEEEEEEecCCC--------------------cceeeEEEEE-----ecCCeEEEecCCCce
Confidence 1110 0 12334555555432211 1112222333 33455543 334556
Q ss_pred ecCCCeEEEEEEEcCCCCCe-EEEEECCEEccCCCceeEEEeCCEEEEEEc-cCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 201 IDDGQCLDLSAVVKGDPEPR-VSWTKNGQPLNSSNILDLKYKNGVASLQIQ-EVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 201 v~~g~~~~l~C~~~g~p~p~-i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~-~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
+.+|+.+.|.|.+.|+|.|. +.|++++..+.... ...++ +|.|. +++.+|+|.|+|.|.|..|.....+.|.
T Consensus 244 ~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~----~~~~~--~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 317 (331)
T 3u83_A 244 YLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV----EAQNR--TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVN 317 (331)
T ss_dssp BTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE----EEETT--EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEEC
T ss_pred EeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc----eecCc--EEEEeCCCccccCeEEEEEEEeccccceEEEEEE
Confidence 88999999999999999998 99999998876542 22333 79999 9999999999999999999999888887
Q ss_pred cCC
Q psy12422 279 PLN 281 (356)
Q Consensus 279 p~~ 281 (356)
+..
T Consensus 318 V~~ 320 (331)
T 3u83_A 318 ITE 320 (331)
T ss_dssp CBC
T ss_pred Eec
Confidence 543
No 64
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.96 E-value=4.3e-29 Score=218.34 Aligned_cols=246 Identities=14% Similarity=0.104 Sum_probs=152.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC----eeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE-EEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD----YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN-CVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~----~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~-~~l~v 75 (356)
|+.+.|.|.+.|.|.|.|+|+|++..+.... ..+..... . ++..|+|.|+|.|.|..|..... +.|.|
T Consensus 154 ~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~--~-----l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V 226 (423)
T 3qs7_E 154 ENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEK--V-----LHELFGTDIRCCARNELGRECTRLFTIDL 226 (423)
T ss_dssp SSSSCEEEEEEESSCCEEEEEEC-------------CEEECCS--E-----ECCCCSSCEEEEEECSSCEEEEECEEEES
T ss_pred CCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccce--E-----EecccCeEEEEEEEcCCCCcceeeEEEEE
Confidence 4678899999999999999999988664211 00111111 1 16789999999999999987553 66666
Q ss_pred eccccchhhhhhcccccccCccceeeeccc---CCceeeecccccccCCcccc----CCCCceEEEEeeccccccccccc
Q psy12422 76 ESEEESKEQQELAHNFLYSGDRKYIEKHIR---PAPAIITTRQEIKSSYSSHT----DDTGRTTTQMSTLSSNYSSSTNN 148 (356)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~---p~p~i~w~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 148 (356)
...+..+ .....+.+|+.+.|.|.+. |.|.+.|++++..+...... ....+.... ...+...
T Consensus 227 ~~~p~~~----~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~-------~~~L~I~ 295 (423)
T 3qs7_E 227 NQTPQTT----LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIR-------ILFAFVS 295 (423)
T ss_dssp SSCCCSS----TTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEE-------EEEEEES
T ss_pred ecCCccC----CCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEE-------EEEEEEe
Confidence 5543321 2355678999999999986 45779999988765332100 000000000 0011122
Q ss_pred cCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccC--CceeecCCCeEEEEEEEcCCCCCeEEEEEC
Q psy12422 149 ATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL--TDKTIDDGQCLDLSAVVKGDPEPRVSWTKN 226 (356)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~ 226 (356)
.....+.+.|.|.+.+. ......|.+ ..+|.+...+ ....+.+|+++.|.|.+.|+|.|.|.|+|+
T Consensus 296 ~v~~~D~G~Y~C~A~N~-------~~~~~~L~V-----~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~ 363 (423)
T 3qs7_E 296 SVARNDTGYYTCSSSKH-------PSQSALVTI-----VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFS 363 (423)
T ss_dssp SCCTTTCEEEEEEETTE-------EEEEEEEEE-----ESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEET
T ss_pred ecCHHHCEEEEEEEecC-------CCceEEEEE-----EeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEEC
Confidence 23333444444433222 223334444 3445554433 456788999999999999999999999999
Q ss_pred CEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 227 GQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 227 g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
|..+....... .....+.+.....+|+|.|+|.|.|..|....++.|...
T Consensus 364 g~~l~~~~~~~----~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~ 413 (423)
T 3qs7_E 364 RKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR 413 (423)
T ss_dssp TEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--
T ss_pred CEECCCccccc----cCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 99986543100 001122235667799999999999999999999998744
No 65
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.96 E-value=1.9e-27 Score=186.56 Aligned_cols=171 Identities=22% Similarity=0.349 Sum_probs=141.6
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.+.|.+.+.|+|+|..+... ++.....++..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|...+
T Consensus 22 G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~p 101 (197)
T 3lcy_A 22 GEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATP 101 (197)
T ss_dssp TSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEEEE
T ss_pred CCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEcCC
Confidence 789999999999999999999999998754 4555566667799999999999999999999999988888888876432
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
....
T Consensus 102 ~~~~---------------------------------------------------------------------------- 105 (197)
T 3lcy_A 102 QFHP---------------------------------------------------------------------------- 105 (197)
T ss_dssp EECT----------------------------------------------------------------------------
T ss_pred CCCC----------------------------------------------------------------------------
Confidence 1100
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEE
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLK 239 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~ 239 (356)
. ........+.+|+.+.|.|.+.|+|.|.+.|++++..+.....+...
T Consensus 106 ---------------------------~-----~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~ 153 (197)
T 3lcy_A 106 ---------------------------G-----YPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIE 153 (197)
T ss_dssp ---------------------------T-----SCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEE
T ss_pred ---------------------------C-----ccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEE
Confidence 0 00112345778999999999999999999999999999888877777
Q ss_pred EeCCEEEEEEccCCC-CCCeEEEEEEEcCCCceEEEEEEec
Q psy12422 240 YKNGVASLQIQEVFP-EDEGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 240 ~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
.......|.|.++.. +|+|.|+|.|.|..|.....+.|.+
T Consensus 154 ~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 194 (197)
T 3lcy_A 154 NTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEI 194 (197)
T ss_dssp ECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEE
Confidence 777778999999995 8999999999999999988887754
No 66
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.96 E-value=4.4e-27 Score=186.80 Aligned_cols=171 Identities=26% Similarity=0.457 Sum_probs=136.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEccc--CCeeEE-ecCCeEEEEEeeCCC-CCCeEEEEEEEeCCce-eEEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSK--RDYSMS-YSDGVVSMEIIDCKP-EDSGEYKCVATNKHGT-DETNCVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~--~~~~~~-~~~~~~~L~i~~~~~-~D~G~Y~C~a~n~~g~-~~~~~~l~v 75 (356)
|+++.|.|.+.|.|.+.|+|+|+|..+.. .++... ..++...|.|.+++. +|+|.|+|.+.|..|. ....+.|.|
T Consensus 21 G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V 100 (212)
T 2yd1_A 21 GGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTI 100 (212)
T ss_dssp TSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEE
T ss_pred CCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEE
Confidence 78999999999999999999999999962 344433 346667999999999 9999999999999888 677788887
Q ss_pred eccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccc
Q psy12422 76 ESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKK 155 (356)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (356)
...+..+
T Consensus 101 ~~~~~~~------------------------------------------------------------------------- 107 (212)
T 2yd1_A 101 YEGDKTP------------------------------------------------------------------------- 107 (212)
T ss_dssp ECTTCSC-------------------------------------------------------------------------
T ss_pred ecccCCC-------------------------------------------------------------------------
Confidence 6431100
Q ss_pred eeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCc
Q psy12422 156 ITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNI 235 (356)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~ 235 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+.....
T Consensus 108 -------------------------------~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~ 156 (212)
T 2yd1_A 108 -------------------------------AGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNP 156 (212)
T ss_dssp -------------------------------TTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTST
T ss_pred -------------------------------CCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCC
Confidence 2235555555667788999999999999999999999999999876432
Q ss_pred eeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEE-EEEe
Q psy12422 236 LDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLT 278 (356)
Q Consensus 236 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~ 278 (356)
.. ....+ .|.|.+++.+|+|.|+|.|.|..|..... +.|.
T Consensus 157 ~~-~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~ 197 (212)
T 2yd1_A 157 RY-SLKDG--FLQIENSREEDQGKYECVAENSMGTEHSKATNLY 197 (212)
T ss_dssp TE-EEETT--EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred eE-EccCC--eEEEccCChhhCEEEEEEeecCCCceeEEEEEEE
Confidence 22 23344 89999999999999999999999988754 4554
No 67
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=2e-28 Score=213.33 Aligned_cols=247 Identities=20% Similarity=0.266 Sum_probs=166.5
Q ss_pred CCceEEEEEe-ccCCCCeeEEeeCC---EEccc----CCeeEEecCCeEEEEEeeCCCCCCe---EEEEEEEeCCceeEE
Q psy12422 1 MQNVIKVKVG-STKPPPTVKWYKGN---RELSK----RDYSMSYSDGVVSMEIIDCKPEDSG---EYKCVATNKHGTDET 69 (356)
Q Consensus 1 g~~v~l~C~~-~g~p~~~v~W~k~g---~~l~~----~~~~~~~~~~~~~L~i~~~~~~D~G---~Y~C~a~n~~g~~~~ 69 (356)
|+++.|.|.+ .+.|.+.|+|+|+| .+... ........++ .|.|.+++.+|+| .|+|.|.|..|....
T Consensus 115 G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~ 192 (395)
T 1bih_A 115 GRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDG--NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEV 192 (395)
T ss_dssp TEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTS--CEEEEEECGGGCCSSEEEEEEEECTTCSSCE
T ss_pred CCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCC--cEEEEEEeeccCCCceEEEEEEEecccceEE
Confidence 7889999996 88999999999986 22221 2222333444 6999999999999 999999999887654
Q ss_pred EEEEEEec---cccc------hhhhhhcccccccCccceeeeccc--CCceeeecccccccCCccccC------CCCceE
Q psy12422 70 NCVVIVES---EEES------KEQQELAHNFLYSGDRKYIEKHIR--PAPAIITTRQEIKSSYSSHTD------DTGRTT 132 (356)
Q Consensus 70 ~~~l~v~~---~~~~------~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i~w~~~~~~~~~~~~~~------~~~~~~ 132 (356)
........ .... .+........+.+|+.+.|.|.+. |.|.+.|++++..+....... ..+...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L 272 (395)
T 1bih_A 193 VLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRL 272 (395)
T ss_dssp EEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEE
T ss_pred EeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceE
Confidence 43322211 1000 011112344578999999999986 777899999876653321100 000001
Q ss_pred EE---EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCc-eeecCCCeEE
Q psy12422 133 TQ---MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTD-KTIDDGQCLD 208 (356)
Q Consensus 133 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~v~~g~~~~ 208 (356)
.. ...+.|.|.|.+.+.. .........+.+ ..+|.+...+.. ..+.+|+.+.
T Consensus 273 ~i~~~~~~d~G~Y~C~a~n~~-------------------g~~~~~~~~l~V-----~~~P~~~~~~~~~~~~~~g~~~~ 328 (395)
T 1bih_A 273 LFKTTLPEDEGVYTCEVDNGV-------------------GKPQKHSLKLTV-----VSAPKYEQKPEKVIVVKQGQDVT 328 (395)
T ss_dssp EESSCCGGGCEEEEEEECCSS-------------------SSCEEEEEEEEE-----EEEEEEEECCCSEEEECTTSCEE
T ss_pred EEccCChhhCEEEEEEEEeCC-------------------CCceEEEEEEEE-----EcCCccccCCCcceEecCCCeEE
Confidence 11 1223344444432221 111122334444 456777766665 7899999999
Q ss_pred EEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 209 LSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 209 l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
|.|.+.|+|.|.+.|+++|..+... ++ ...++ .|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 329 l~C~~~g~p~p~v~W~~~g~~~~~~-~~--~~~~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~ 393 (395)
T 1bih_A 329 IPCKVTGLPAPNVVWSHNAKPLSGG-RA--TVTDS--GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQ 393 (395)
T ss_dssp EECEEEEESCCCCEEEETTEECCSS-SE--EEETT--EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEECcccCCeeEEEECCEECCCC-ce--EEECC--EEEEeeCCcccCEEEEEEEEccCCCceEEEEEE
Confidence 9999999999999999999998754 33 33344 899999999999999999999999998888775
No 68
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=199.43 Aligned_cols=251 Identities=13% Similarity=0.135 Sum_probs=165.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 80 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 80 (356)
|+++.|.|.+.+. |+|++++.. .+..........|.|.+++.+|+|.|+|.+.|..|..+..+.|.|.+++.
T Consensus 19 G~~v~L~C~~~~~----v~W~~~~~~----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~ 90 (292)
T 4dkd_C 19 GATVTLRCVGNGS----VEWDGPPSP----HWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPAR 90 (292)
T ss_dssp TCCEEEEEECSSC----CCBCCCCCS----SCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSC
T ss_pred CCcEEEEEcCCCc----eEEccCCCC----ceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccc
Confidence 7899999999874 999986543 22333444556999999999999999999999888888888999987654
Q ss_pred chhhhhhcccccccCccceeeeccc-CC--ceeeecccccccCCccc-cCC-CCceE---EEEeeccccccccccccCCC
Q psy12422 81 SKEQQELAHNFLYSGDRKYIEKHIR-PA--PAIITTRQEIKSSYSSH-TDD-TGRTT---TQMSTLSSNYSSSTNNATSP 152 (356)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~c~~~-p~--p~i~w~~~~~~~~~~~~-~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~ 152 (356)
.+. .......+.+|+.+.|.|.+. |. +.+.|++++........ ... ..... .....+.+.|.|...+.
T Consensus 91 ~~~-~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~--- 166 (292)
T 4dkd_C 91 PWN-VLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMG--- 166 (292)
T ss_dssp CEE-ESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECST---
T ss_pred ccc-ccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeC---
Confidence 322 223345678999999999987 44 67999987544332111 000 00000 11223334444443221
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCC-CeEEEEECCEEcc
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE-PRVSWTKNGQPLN 231 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-p~i~W~~~g~~~~ 231 (356)
.....+....+.+... ...+|.+...+....+.+|+.+.|.|.+.+.|+ +.+.|++++..+.
T Consensus 167 ----------------~~~~~s~~~~l~V~~~-~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~ 229 (292)
T 4dkd_C 167 ----------------GRKVMSISIRLKVQKV-IPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLA 229 (292)
T ss_dssp ----------------TSCEECCCEEEEEECC-CCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCC
T ss_pred ----------------CCceeEEEEEEEEeCC-CCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccc
Confidence 1112222334444211 123788887777777889999999999988775 4588999988765
Q ss_pred CCCceeEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 232 SSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 232 ~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
.......... .....|.|.+++.+|+|.|+|.|.|..|....++.|.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 280 (292)
T 4dkd_C 230 IPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVV 280 (292)
T ss_dssp CCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-
T ss_pred cCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEe
Confidence 4433221111 123589999999999999999999999999998888744
No 69
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.95 E-value=3.5e-26 Score=179.13 Aligned_cols=161 Identities=22% Similarity=0.359 Sum_probs=126.8
Q ss_pred CCceEEEEEec-cCCCCeeEEeeCCEEcccC---CeeEEecCC-------eEEEEEeeCCCCCCeEEEEEEEeCCceeEE
Q psy12422 1 MQNVIKVKVGS-TKPPPTVKWYKGNRELSKR---DYSMSYSDG-------VVSMEIIDCKPEDSGEYKCVATNKHGTDET 69 (356)
Q Consensus 1 g~~v~l~C~~~-g~p~~~v~W~k~g~~l~~~---~~~~~~~~~-------~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 69 (356)
|+++.|.|.+. |.|.+.|+|+|||..+... ++.+..... ...|.|.+++.+|+|.|+|.+.|..|....
T Consensus 17 G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 96 (195)
T 2c5d_C 17 GLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVS 96 (195)
T ss_dssp TCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEEEC
T ss_pred CCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCceec
Confidence 78999999998 9999999999999999765 223332222 468999999999999999999998766433
Q ss_pred E-EEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccc
Q psy12422 70 N-CVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNN 148 (356)
Q Consensus 70 ~-~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (356)
. +.|.|.
T Consensus 97 ~~~~l~V~------------------------------------------------------------------------ 104 (195)
T 2c5d_C 97 QPGYVGLE------------------------------------------------------------------------ 104 (195)
T ss_dssp CCEEEEEC------------------------------------------------------------------------
T ss_pred ccEEEEEe------------------------------------------------------------------------
Confidence 3 555553
Q ss_pred cCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCC-eEEEEECC
Q psy12422 149 ATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEP-RVSWTKNG 227 (356)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~i~W~~~g 227 (356)
.+|.+...+....+.+|+.+.|.|.+.|+|.| .+.|+++|
T Consensus 105 ---------------------------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~ 145 (195)
T 2c5d_C 105 ---------------------------------------GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDA 145 (195)
T ss_dssp ---------------------------------------CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESS
T ss_pred ---------------------------------------cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECC
Confidence 22444444555678899999999999999999 99999999
Q ss_pred EEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceE-EEEEEec
Q psy12422 228 QPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAE-TKCKLTP 279 (356)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~p 279 (356)
..+...... .....|.|.+++ |+|.|+|.|.|..|... ..+.|.+
T Consensus 146 ~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 146 VPLATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CBSSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EeccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 988765432 334689999998 89999999999999876 5666654
No 70
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.95 E-value=6.1e-26 Score=202.26 Aligned_cols=268 Identities=15% Similarity=0.142 Sum_probs=147.0
Q ss_pred CCceEEEEEeccCC--CCeeEEeeC--CEEcc------------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKG--NRELS------------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~--g~~l~------------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.+.+ .+.+.|||+ |+.+. ..++.... .++..+|+|.+++.+|+|.|
T Consensus 16 G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 95 (475)
T 1iga_A 16 GASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPEDTAVY 95 (475)
T ss_pred CCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCChhhCEEE
Confidence 79999999998765 578999995 32110 11222222 23557899999999999999
Q ss_pred EEEEEeCCce------eEEEEEEEEeccc-cchhhhhhcccccccCccceeeeccc---CC-c-eeeecccccccCCccc
Q psy12422 57 KCVATNKHGT------DETNCVVIVESEE-ESKEQQELAHNFLYSGDRKYIEKHIR---PA-P-AIITTRQEIKSSYSSH 124 (356)
Q Consensus 57 ~C~a~n~~g~------~~~~~~l~v~~~~-~~~~~~~~~~~~~~~g~~~~l~c~~~---p~-p-~i~w~~~~~~~~~~~~ 124 (356)
.|.+.|..|. ....+.|.|.... ..+.........+.+|+.+.|.|.+. |. | .+.|++++........
T Consensus 96 ~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~ 175 (475)
T 1iga_A 96 YCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNF 175 (475)
T ss_pred EEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeC
Confidence 9999998652 2344577776421 11211111122236899999999996 44 4 8999887643211100
Q ss_pred c----CCCCceEE----E----EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeee-cCCCCCCCCCe
Q psy12422 125 T----DDTGRTTT----Q----MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELI-MPPDTAMTPPQ 191 (356)
Q Consensus 125 ~----~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~ 191 (356)
. ..++.... . ...+.+.|.|.+.+...........+.... .. ......+. ..... ..+|.
T Consensus 176 ~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~---~~---~~~~~~~~~~~~~~-~~~p~ 248 (475)
T 1iga_A 176 PPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPS---TP---PTPSPSTPPTPSPS-CCHPR 248 (475)
T ss_pred CceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEeccccc---Cc---ccccccccccCCCC-CCCcE
Confidence 0 01111100 0 012345666665444321100100000000 00 00000000 00000 12444
Q ss_pred e-cccCCceeecCCCeEEEEEEEcCCCC---CeEEEEECCEEccCCCc-eeEEE-eC---CEEEEEEccCCCCCCeEEEE
Q psy12422 192 F-ANKLTDKTIDDGQCLDLSAVVKGDPE---PRVSWTKNGQPLNSSNI-LDLKY-KN---GVASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 192 ~-~~~~~~~~v~~g~~~~l~C~~~g~p~---p~i~W~~~g~~~~~~~~-~~~~~-~~---~~~~L~i~~v~~~d~G~Y~C 262 (356)
+ ...+....+.+|+++.|.|.+.|.++ +.|+| + +..+..... ..... ++ ..+.|.|.+++.+|+|.|+|
T Consensus 249 v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C 326 (475)
T 1iga_A 249 LSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTC 326 (475)
T ss_pred EEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEE
Confidence 4 33344444689999999999998755 68999 4 433322111 11111 11 23579999999999999999
Q ss_pred EEEcCCCceEEEEEE
Q psy12422 263 TATNSLGTAETKCKL 277 (356)
Q Consensus 263 ~a~n~~g~~~~~~~l 277 (356)
.|.|..|.......+
T Consensus 327 ~a~n~~~~~~~~~~v 341 (475)
T 1iga_A 327 TAAYPESKTPLTATL 341 (475)
T ss_pred EEEcCCCCCceEEEe
Confidence 999999875443333
No 71
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.95 E-value=7.1e-26 Score=176.86 Aligned_cols=165 Identities=22% Similarity=0.435 Sum_probs=130.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 80 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 80 (356)
|+++.|.|.+.|.|.+.++|||+|..+........ ..+...|.|.+++.+|+|.|+|.+.|..|.....+.|.|..++.
T Consensus 19 G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~ 97 (192)
T 2va4_A 19 GEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL-KGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPH 97 (192)
T ss_dssp CCCEEEECEEECSSCCEEEEEETTEECCCSSSEEE-ETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEE-eCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEEccCc
Confidence 78999999999999999999999999976543222 22333899999999999999999999998888777777753211
Q ss_pred chhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeeee
Q psy12422 81 SKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRRM 160 (356)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
T Consensus 98 -------------------------------------------------------------------------------- 97 (192)
T 2va4_A 98 -------------------------------------------------------------------------------- 97 (192)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEEC--CEEccC-----C
Q psy12422 161 NSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKN--GQPLNS-----S 233 (356)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~--g~~~~~-----~ 233 (356)
+... ....+.+|+.+.|.|.+.|+|.|.+.|+++ +..+.. .
T Consensus 98 -------------------------------~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~ 145 (192)
T 2va4_A 98 -------------------------------IIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLD 145 (192)
T ss_dssp -------------------------------EEEE-CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTT
T ss_pred -------------------------------cccc-CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccC
Confidence 1000 123466799999999999999999999998 666653 2
Q ss_pred CceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 234 NILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 234 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
..+..........|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 146 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 190 (192)
T 2va4_A 146 GRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLD 190 (192)
T ss_dssp SCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred CcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEE
Confidence 344555556678999999999999999999999999988888775
No 72
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=3.3e-27 Score=199.31 Aligned_cols=252 Identities=12% Similarity=0.078 Sum_probs=150.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCC-----ceeEEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH-----GTDETNCVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~-----g~~~~~~~l~v 75 (356)
|++|+|.|.+.+. .+.+.|+|+|..+..... .......|.|.+++.+|+|.|+|.|.|.. +..+..+.|.|
T Consensus 38 G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~---~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V 113 (316)
T 3vh8_G 38 GGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFH---GRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMV 113 (316)
T ss_dssp TSCEEEEEEBTTB-CCSEEEEESSCSSSCHHH---HCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEE
T ss_pred CCCEEEEEEccCC-CceEEEEeCCCccceeec---CCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEE
Confidence 7899999999887 688999999987653210 11122379999999999999999998632 23445677877
Q ss_pred eccccchhhhhhcccccccCccceeeeccc-CCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcc
Q psy12422 76 ESEEESKEQQELAHNFLYSGDRKYIEKHIR-PAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSK 154 (356)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~-p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (356)
......+.....+...+.+|+.+.|.|.+. +.+.+.|++++............ .......-+........+
T Consensus 114 ~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~--------~~~~~~~~L~i~~v~~~D 185 (316)
T 3vh8_G 114 TGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGQI--------HDGVSKANFSIGPMMLAL 185 (316)
T ss_dssp ECSSCCCEEEEESCSEEETTCCEEEEEEESSCCSEEEEEETTCCSCCEEEECEE--------ETTEEEEEEEECSCCGGG
T ss_pred ecCCCCCeEEecCCCccCCCCeEEEEEcCCCCCcEEEEEECCCccccceeeeee--------cCCCceEEEEECCCChhh
Confidence 665433333333344578999999999997 55678999887665322111000 000000001111122333
Q ss_pred ceeeeeeccccCCCC-CcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC
Q psy12422 155 KITRRMNSILDTDSP-SRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS 233 (356)
Q Consensus 155 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~ 233 (356)
.+.|.|......+.. ....+....+.+.. ...+|.+...+.. .+.+|+.++|.|.+. .|.+.+.|+|+|..+...
T Consensus 186 ~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~--~~~~p~i~~~~~~-~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~ 261 (316)
T 3vh8_G 186 AGTYRCYGSVTHTPYQLSAPSDPLDIVVTG--PYEKPSLSAQPGP-KVQAGESVTLSCSSR-SSYDMYHLSREGGAHERR 261 (316)
T ss_dssp CEEEEEEEECTTCTTBCCCCCCCEEEEEEC--SSCCCEEEEESCS-CCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEE
T ss_pred CceEEEEEecCCCCccccCCCCCEEEEecC--CCCCCeEEeCCCC-eecCCCcEEEEEECC-CCCcEEEEEECCCcCCCc
Confidence 333333333222211 11112333343321 2456666665543 678999999999997 478899999999776532
Q ss_pred CceeEEEe-CCEEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 234 NILDLKYK-NGVASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 234 ~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
........ .....|.|.+++ |+|.|+|.|.|..+.
T Consensus 262 ~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 262 LPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp EECEECTTSCEEEEEECC-------CEEEEEEEBTTBT
T ss_pred eeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCc
Confidence 11111111 123689999999 999999999998764
No 73
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.95 E-value=7.9e-27 Score=207.04 Aligned_cols=259 Identities=14% Similarity=0.157 Sum_probs=142.4
Q ss_pred CCceEEEEEeccCC--CCeeEEeeC--CEE---c-c--------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKG--NRE---L-S--------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~--g~~---l-~--------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++++|.|.+.+.| .+.+.|||+ |.. + . ..++.... .++..+|+|.+++.+|+|.|
T Consensus 15 G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 94 (457)
T 1hzh_H 15 GASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVY 94 (457)
T ss_dssp TCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCcccCEEE
Confidence 79999999998876 678999994 321 1 0 12333322 24567999999999999999
Q ss_pred EEEEEeCCc------------eeEEEEEEEEeccccchhh--hhhcccccccCccceeeeccc---CC-ceeeecccccc
Q psy12422 57 KCVATNKHG------------TDETNCVVIVESEEESKEQ--QELAHNFLYSGDRKYIEKHIR---PA-PAIITTRQEIK 118 (356)
Q Consensus 57 ~C~a~n~~g------------~~~~~~~l~v~~~~~~~~~--~~~~~~~~~~g~~~~l~c~~~---p~-p~i~w~~~~~~ 118 (356)
+|.+.|..| .....+.|.|......++. ...+...+.+|+.+.|.|.+. |. +.+.|++++..
T Consensus 95 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~ 174 (457)
T 1hzh_H 95 YCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 174 (457)
T ss_dssp EEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBC
T ss_pred EEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEe
Confidence 999999865 2234456777652211111 111223467899999999987 43 67999998754
Q ss_pred cCCcc---ccCCCCceE----EE----EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCC-CCC
Q psy12422 119 SSYSS---HTDDTGRTT----TQ----MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPP-DTA 186 (356)
Q Consensus 119 ~~~~~---~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (356)
..... ....++... .. ...+ +.|.|.+.+...... .... ..... ......+.+.+ ...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~---~~~~-v~~~~-----~~~~~~~~~~~~~~~ 244 (457)
T 1hzh_H 175 SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK---VDKK-AEPKS-----CDKTHTCPPCPAPEL 244 (457)
T ss_dssp TTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEE---EEEE-CCCCC-----SCSSCSCCSCCCCCC
T ss_pred ccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcc---eeEE-ecccC-----CCcccccCCCCCccc
Confidence 32110 001111100 00 0112 555555543221100 0000 00000 00000000000 001
Q ss_pred CCCCee-cccCCcee-ecCCCeEEEEEEEcCCCCC----eEEEEECCEEccCCCcee-EEEeCCEEEEEEc---cCCCCC
Q psy12422 187 MTPPQF-ANKLTDKT-IDDGQCLDLSAVVKGDPEP----RVSWTKNGQPLNSSNILD-LKYKNGVASLQIQ---EVFPED 256 (356)
Q Consensus 187 ~~~p~~-~~~~~~~~-v~~g~~~~l~C~~~g~p~p----~i~W~~~g~~~~~~~~~~-~~~~~~~~~L~i~---~v~~~d 256 (356)
..+|.+ ...+.... +.+|+.+.|.|.+.|.|++ .|.|+++|..+....... ....++ .|.+. .+...|
T Consensus 245 ~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g--~~~~~~~l~i~~~d 322 (457)
T 1hzh_H 245 LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNS--TYRVVSVLTVLHQD 322 (457)
T ss_dssp SSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTS--CEEEEEEECCCHHH
T ss_pred cCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCC--cEEEEEEEEECHHH
Confidence 234554 33333322 6789999999999998653 899999998875432111 111222 22222 234555
Q ss_pred ---CeEEEEEEEcCCCce
Q psy12422 257 ---EGVYVCTATNSLGTA 271 (356)
Q Consensus 257 ---~G~Y~C~a~n~~g~~ 271 (356)
+|.|+|.|.|..+..
T Consensus 323 ~~d~G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 323 WLNGKEYKCKVSNKALPA 340 (457)
T ss_dssp HHHTCCEEEEEECTTSSS
T ss_pred ccCCCcEEEEEeCCCCCC
Confidence 999999999876654
No 74
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.95 E-value=3.9e-26 Score=177.95 Aligned_cols=162 Identities=20% Similarity=0.379 Sum_probs=123.7
Q ss_pred CCceEEEEEeccCCCCeeEEee-CCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCcee-EEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYK-GNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD-ETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k-~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|. .+.||| +|..+... ++.....++...|.|.+++.+|+|.|+|.+.|..|.. +..+.|.|..
T Consensus 17 G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~ 95 (189)
T 2v44_A 17 GESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQ 95 (189)
T ss_dssp TCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred CCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEec
Confidence 789999999999887 899999 78887654 4445556667799999999999999999999998766 4556665542
Q ss_pred cccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
+
T Consensus 96 ~------------------------------------------------------------------------------- 96 (189)
T 2v44_A 96 K------------------------------------------------------------------------------- 96 (189)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccC--CCc
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNS--SNI 235 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~--~~~ 235 (356)
|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+.. ..+
T Consensus 97 --------------------------------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~ 144 (189)
T 2v44_A 97 --------------------------------LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNR 144 (189)
T ss_dssp --------------------------------CEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTT
T ss_pred --------------------------------CceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCC
Confidence 2222223345688999999999999999999999999988763 223
Q ss_pred eeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 236 LDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 236 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
+... .+ ..|.|.+++.+|+|.|+|.|.|..|.......+
T Consensus 145 ~~~~-~~--~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~ 183 (189)
T 2v44_A 145 FAML-AN--NNLQILNINKSDEGIYRCEGRVEARGEIDFRDI 183 (189)
T ss_dssp EEEC-TT--SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEE
T ss_pred EEEe-cC--CcEEEEEcCcccCeEEEEEEEccccCceeeeeE
Confidence 2222 22 279999999999999999999999876654443
No 75
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.94 E-value=3.8e-26 Score=185.14 Aligned_cols=176 Identities=24% Similarity=0.375 Sum_probs=133.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCe--eEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDY--SMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.+.|+|+|+|..+..... ......+..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|...
T Consensus 30 G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~ 109 (241)
T 3grw_A 30 ANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLER 109 (241)
T ss_dssp TSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEecc
Confidence 78999999999999999999999999864321 1222333348999999999999999999999998888888877642
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
..
T Consensus 110 ~~------------------------------------------------------------------------------ 111 (241)
T 3grw_A 110 SP------------------------------------------------------------------------------ 111 (241)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 11
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEE----CCEEccCCC
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK----NGQPLNSSN 234 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~----~g~~~~~~~ 234 (356)
..++.+...+....+.+|+.+.|.|.+.|+|.|.+.|++ +|..+....
T Consensus 112 ----------------------------~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~ 163 (241)
T 3grw_A 112 ----------------------------HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDG 163 (241)
T ss_dssp ----------------------------CCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTT
T ss_pred ----------------------------CCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCC
Confidence 011112222345678889999999999999999999999 888776554
Q ss_pred ceeEEE--------eCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCC
Q psy12422 235 ILDLKY--------KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNS 282 (356)
Q Consensus 235 ~~~~~~--------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~ 282 (356)
...... ......|.|.+++.+|+|.|+|.|.|..|....++.|.+..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 219 (241)
T 3grw_A 164 TPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGP 219 (241)
T ss_dssp CCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC---
T ss_pred ceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCC
Confidence 322211 112468999999999999999999999999999988884433
No 76
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.94 E-value=6.1e-26 Score=177.13 Aligned_cols=164 Identities=19% Similarity=0.282 Sum_probs=124.1
Q ss_pred CCceEEEEEeccCC-CCeeEEee-CCEEcccC--CeeEE-ecCCeEEEEEeeCCCCCCeEEEEEEEeCC-ceeEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKP-PPTVKWYK-GNRELSKR--DYSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNKH-GTDETNCVVI 74 (356)
Q Consensus 1 g~~v~l~C~~~g~p-~~~v~W~k-~g~~l~~~--~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~-g~~~~~~~l~ 74 (356)
|+++.|.|.+.+.| .+.+.|+| +|..+... ++... ...+...|.|.+++.+|+|.|+|.+.|.. +.....+.|.
T Consensus 17 G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~ 96 (191)
T 1epf_A 17 GESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVK 96 (191)
T ss_dssp TCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEE
T ss_pred CCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEE
Confidence 78999999998876 78999999 88888632 33322 23566799999999999999999999987 4445555555
Q ss_pred EeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcc
Q psy12422 75 VESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSK 154 (356)
Q Consensus 75 v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (356)
|..
T Consensus 97 v~~----------------------------------------------------------------------------- 99 (191)
T 1epf_A 97 IFQ----------------------------------------------------------------------------- 99 (191)
T ss_dssp EEC-----------------------------------------------------------------------------
T ss_pred eec-----------------------------------------------------------------------------
Confidence 532
Q ss_pred ceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC
Q psy12422 155 KITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN 234 (356)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~ 234 (356)
+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+....
T Consensus 100 ----------------------------------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~ 145 (191)
T 1epf_A 100 ----------------------------------KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKK 145 (191)
T ss_dssp ----------------------------------CSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGC
T ss_pred ----------------------------------CceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccC
Confidence 2333333445568899999999999999999999999999986543
Q ss_pred ceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 235 ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 235 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
...+....+ ..|.|.+++.+|+|.|+|.|.|..+.......
T Consensus 146 ~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 186 (191)
T 1epf_A 146 DVRFIVLSN-NYLQIRGIKKTDEGTYRCEGRILARGEINFKD 186 (191)
T ss_dssp CTTEEECTT-SCEEETTCCGGGCEEEEEEEEEGGGTEEEEEE
T ss_pred CceEEEecC-CeEEECCCChhhCEEEEEEEEEecceeEEEEE
Confidence 222222221 27999999999999999999999976554433
No 77
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.94 E-value=1.2e-26 Score=181.39 Aligned_cols=162 Identities=28% Similarity=0.437 Sum_probs=125.4
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC--CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCcee-EEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR--DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD-ETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~--~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.+.+.|+|+|..+... ++.....+. .|.|.+++.+|+|.|+|.+.|..|.. ...+.|.|..
T Consensus 22 G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~ 99 (192)
T 2iep_A 22 EEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKM 99 (192)
T ss_dssp TSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEE
T ss_pred CCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEe
Confidence 789999999999999999999999998743 333332332 79999999999999999999987773 4455565543
Q ss_pred cccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
.
T Consensus 100 ~------------------------------------------------------------------------------- 100 (192)
T 2iep_A 100 K------------------------------------------------------------------------------- 100 (192)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 2
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD 237 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~ 237 (356)
|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+....++.
T Consensus 101 --------------------------------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~ 148 (192)
T 2iep_A 101 --------------------------------PKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIA 148 (192)
T ss_dssp --------------------------------EEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEE
T ss_pred --------------------------------CccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEE
Confidence 112222234568889999999999999999999999999988766544
Q ss_pred EEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEE-EEEEe
Q psy12422 238 LKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLT 278 (356)
Q Consensus 238 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~ 278 (356)
... . ..|.|.+++.+|+|.|+|.|.|..|.... .+.|.
T Consensus 149 ~~~-~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 187 (192)
T 2iep_A 149 VLE-S--GSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLE 187 (192)
T ss_dssp ECT-T--SCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred Eec-C--CcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 322 2 27999999999999999999999997743 34443
No 78
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.94 E-value=1.4e-25 Score=173.74 Aligned_cols=157 Identities=20% Similarity=0.325 Sum_probs=122.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCe-eEEecCC--eEEEEEeeCCCCCCeEEEEEEEeCCcee-EEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDY-SMSYSDG--VVSMEIIDCKPEDSGEYKCVATNKHGTD-ETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~-~~~~~~~--~~~L~i~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~v~ 76 (356)
|+++.|.|.+.|.|.+.+.|+|+|..+..... .....+. ...|.|.+++.+|+|.|+|.+.|..|.. +..+.|.|.
T Consensus 17 G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~ 96 (182)
T 1rhf_A 17 GQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVE 96 (182)
T ss_dssp TCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEE
T ss_pred CCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEe
Confidence 78999999999999999999999999976532 2222221 4689999999999999999999986643 345555554
Q ss_pred ccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccce
Q psy12422 77 SEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKI 156 (356)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (356)
.
T Consensus 97 ~------------------------------------------------------------------------------- 97 (182)
T 1rhf_A 97 G------------------------------------------------------------------------------- 97 (182)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 2
Q ss_pred eeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCC-eEEEEECCEEccCCCc
Q psy12422 157 TRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEP-RVSWTKNGQPLNSSNI 235 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~i~W~~~g~~~~~~~~ 235 (356)
+|.+...+....+.+|+.+.|.|.+.|+|.| .+.|+++|..+.....
T Consensus 98 --------------------------------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~ 145 (182)
T 1rhf_A 98 --------------------------------VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP 145 (182)
T ss_dssp --------------------------------SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE
T ss_pred --------------------------------CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC
Confidence 2344444455678899999999999999999 8999999998865421
Q ss_pred eeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEE-EEEE
Q psy12422 236 LDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKL 277 (356)
Q Consensus 236 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l 277 (356)
....|.|.++ +|+|.|+|.|.|..|.... .+.|
T Consensus 146 -------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l 179 (182)
T 1rhf_A 146 -------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATV 179 (182)
T ss_dssp -------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEE
T ss_pred -------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEE
Confidence 3458999998 5899999999999998753 5544
No 79
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.94 E-value=1.3e-28 Score=216.99 Aligned_cols=250 Identities=14% Similarity=0.129 Sum_probs=145.5
Q ss_pred CCceEEEEEeccCC--CCeeEEeeC--CEEc----c--------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKG--NREL----S--------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~--g~~l----~--------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.+.+ .+.|.|||+ |..+ . ..++.+.. .++..+|.|.+++.+|+|.|
T Consensus 14 G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 93 (434)
T 1igy_B 14 GASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSDDSAVY 93 (434)
T ss_dssp BCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGGGCSEE
T ss_pred CCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChHHCEEE
Confidence 78999999998764 678999996 3221 0 11222211 13445899999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEecccc-chhhh-hhcccccccCccceeeeccc---CCc-eeeecccccccCCccc--cCCC
Q psy12422 57 KCVATNKHGTDETNCVVIVESEEE-SKEQQ-ELAHNFLYSGDRKYIEKHIR---PAP-AIITTRQEIKSSYSSH--TDDT 128 (356)
Q Consensus 57 ~C~a~n~~g~~~~~~~l~v~~~~~-~~~~~-~~~~~~~~~g~~~~l~c~~~---p~p-~i~w~~~~~~~~~~~~--~~~~ 128 (356)
+|.+.|..+.....+.|.|..... .+... ..+...+.+|+.+.|.|.+. |.| .+.|++++........ ....
T Consensus 94 ~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~ 173 (434)
T 1igy_B 94 YCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQS 173 (434)
T ss_dssp CCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECS
T ss_pred EEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecC
Confidence 999998654444556777764211 11111 11223357899999999986 555 8999998764321100 0000
Q ss_pred CceE----EEEe----eccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecC-------C-CCCCCCCee
Q psy12422 129 GRTT----TQMS----TLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMP-------P-DTAMTPPQF 192 (356)
Q Consensus 129 ~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~p~~ 192 (356)
+... .... .+ +.|.|.+.+...... ....+.+. . .....+..+
T Consensus 174 ~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~--------------------~~~~~~~~~~~~~v~~~~~~~~p~v~ 232 (434)
T 1igy_B 174 DLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTK--------------------VDKKIVPRDCGCKPCICTVPEVSSVF 232 (434)
T ss_dssp SCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCC--------------------EEEECCCCCCCCCCCCCCCSSSCCEE
T ss_pred CcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCcc--------------------ceeeccCCCCCCccccCCCCcCcEEE
Confidence 1100 0000 11 445554433322110 01111110 0 000112223
Q ss_pred cccCCcee-ecCCCeEEEEEEEcCCC----CCeEEEEECCEEccCCCceeE-EEeC----CEEEEEEccCCCCCCeEEEE
Q psy12422 193 ANKLTDKT-IDDGQCLDLSAVVKGDP----EPRVSWTKNGQPLNSSNILDL-KYKN----GVASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 193 ~~~~~~~~-v~~g~~~~l~C~~~g~p----~p~i~W~~~g~~~~~~~~~~~-~~~~----~~~~L~i~~v~~~d~G~Y~C 262 (356)
...+.... +.+|+.+.|.|.+.|.| .+.|.|+++|..+........ ...+ ..+.|.|.+++.+|+|.|+|
T Consensus 233 ~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 312 (434)
T 1igy_B 233 IFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKC 312 (434)
T ss_dssp EECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBC
T ss_pred EeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEE
Confidence 33333222 88999999999999884 357999999877653221110 0111 12469999999999999999
Q ss_pred EEEcCCCce
Q psy12422 263 TATNSLGTA 271 (356)
Q Consensus 263 ~a~n~~g~~ 271 (356)
.|.|..|..
T Consensus 313 ~a~n~~~~~ 321 (434)
T 1igy_B 313 RVNSAAFPA 321 (434)
T ss_dssp CBCCSSCSS
T ss_pred EEECCCCCC
Confidence 999998854
No 80
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.94 E-value=3.7e-26 Score=178.04 Aligned_cols=163 Identities=25% Similarity=0.450 Sum_probs=120.6
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC--CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeE--EEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR--DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE--TNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~--~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~--~~~~l~v~ 76 (356)
|+++.|.|.+.+.|.+.+.|+|++..+... .+.....++ +|.|.+++.+|+|.|+|.+.|..+... ..+.+.|.
T Consensus 17 G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~ 94 (189)
T 2v5t_A 17 GEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN--NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN 94 (189)
T ss_dssp TSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS--CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred CCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC--CEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEec
Confidence 789999999999999999999999887632 222233344 699999999999999999999865443 23344433
Q ss_pred ccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccce
Q psy12422 77 SEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKI 156 (356)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (356)
.++
T Consensus 95 ~~p----------------------------------------------------------------------------- 97 (189)
T 2v5t_A 95 VPP----------------------------------------------------------------------------- 97 (189)
T ss_dssp EEE-----------------------------------------------------------------------------
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 221
Q ss_pred eeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccC--CceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC
Q psy12422 157 TRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL--TDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN 234 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~ 234 (356)
.+.... ....+.+|+.+.|.|.+.|+|.|.+.|+++|..+....
T Consensus 98 ----------------------------------~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~ 143 (189)
T 2v5t_A 98 ----------------------------------AISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE 143 (189)
T ss_dssp ----------------------------------EEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSS
T ss_pred ----------------------------------CcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCC
Confidence 111101 13456789999999999999999999999999998776
Q ss_pred ceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 235 ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 235 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
.+..... ...|.|.+++.+|+|.|+|.|.|..|....++.+.
T Consensus 144 ~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 185 (189)
T 2v5t_A 144 KYILKGS--NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQ 185 (189)
T ss_dssp SEEEETT--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred cEEEecC--CCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEE
Confidence 5544333 34899999999999999999999999988887775
No 81
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.94 E-value=6.4e-26 Score=182.51 Aligned_cols=173 Identities=24% Similarity=0.402 Sum_probs=132.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC-e-eEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD-Y-SMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-~-~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.+.|+|+|+|..+.... . ......+..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|...
T Consensus 34 G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~ 113 (231)
T 3ojm_B 34 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVER 113 (231)
T ss_dssp TSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcC
Confidence 7899999999999999999999999986432 1 1122233348999999999999999999999998888888887643
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
+.
T Consensus 114 ~~------------------------------------------------------------------------------ 115 (231)
T 3ojm_B 114 SR------------------------------------------------------------------------------ 115 (231)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 11
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCee-cccCCceeecCCCeEEEEEEEcCCCCCeEEEEE----CCEEccCC
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQF-ANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK----NGQPLNSS 233 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~----~g~~~~~~ 233 (356)
.+|.+ ...+....+.+|+.+.|.|.+.|+|.|.+.|++ +|..+...
T Consensus 116 -----------------------------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~ 166 (231)
T 3ojm_B 116 -----------------------------HRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPD 166 (231)
T ss_dssp -----------------------------CCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTT
T ss_pred -----------------------------CCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCC
Confidence 11212 122345678899999999999999999999999 88777544
Q ss_pred CceeEEE--e-----CCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 234 NILDLKY--K-----NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 234 ~~~~~~~--~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
....... . .....|.|.+++.+|+|.|+|.|.|..|.....+.|.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 220 (231)
T 3ojm_B 167 GLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVL 220 (231)
T ss_dssp SCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEe
Confidence 3222111 1 112479999999999999999999999999888888743
No 82
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.94 E-value=1e-26 Score=200.22 Aligned_cols=228 Identities=14% Similarity=0.133 Sum_probs=146.4
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 80 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 80 (356)
|+++.|.|.+.+.|.|.|+|+|+|..+. ..+ ..|.|.+++.+|+|.|+|.|.|..+.....+.|.|...+.
T Consensus 111 G~~v~l~C~~~~~p~~~v~W~~~~~~~~-------~~~--~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~ 181 (363)
T 1wio_A 111 GQSLTLTLESPPGSSPSVQCRSPRGKNI-------QGG--KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 181 (363)
T ss_dssp BSCEEEEEECCTTCCCCEEEECSSSCEE-------EES--SEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSC
T ss_pred CCCEEEEEEcCCCCCCeEEEEcCCCccc-------ccc--eEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCC
Confidence 7899999999999999999999976432 122 2899999999999999999999988777777777775443
Q ss_pred chhhhhhcccccccCccceeeeccc-------CCceeeecccccccCCccccC--CCCceEEEEee--------cccccc
Q psy12422 81 SKEQQELAHNFLYSGDRKYIEKHIR-------PAPAIITTRQEIKSSYSSHTD--DTGRTTTQMST--------LSSNYS 143 (356)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~c~~~-------p~p~i~w~~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~ 143 (356)
.+ ....+.+|+.+.|.|.+. |.|.+.|++++.......... ........... ..+..
T Consensus 182 ~~-----~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 255 (363)
T 1wio_A 182 AS-----SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPL- 255 (363)
T ss_dssp SE-----EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSC-
T ss_pred CC-----CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCce-
Confidence 22 445578899999999764 367799998776654310000 00000000000 00000
Q ss_pred ccccccCCCccceeeeeecccc--CCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCe-
Q psy12422 144 SSTNNATSPSKKITRRMNSILD--TDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPR- 220 (356)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~- 220 (356)
.+........+.+.|.|...+. .+ .......+.+. -..|+.+.|.|.+.|.|+|.
T Consensus 256 ~L~i~~v~~~d~G~Y~C~a~n~~~~g----~~~~~~~l~V~------------------~v~g~~~~l~C~~~g~p~p~~ 313 (363)
T 1wio_A 256 HLTLPQALPQYAGSGNLTLALEAKTG----KLHQEVNLVVM------------------RATQLQKNLTCEVWGPTSPKL 313 (363)
T ss_dssp EEEESSBCGGGCEEEEEEECBTTTTC----CEEEEEEEEEE------------------EECCCSSSEEEEEESSCCTTC
T ss_pred EEEEccCCcCcCcEEEEEEEEhhhcC----eEEEEEeEEEE------------------EecCCCeeEEEEEccccCCCc
Confidence 1111122223333344433222 11 11222233321 11288999999999999998
Q ss_pred -EEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 221 -VSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 221 -i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
+.|+++|..+... ..|.|.+++.+|+|.|+|.|.|. |....+..+
T Consensus 314 ~i~W~~~~~~~~~~-----------~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~ 359 (363)
T 1wio_A 314 MLSLKLENKEAKVS-----------KREKAVWVLNPEAGMWQCLLSDS-GQVLLESNI 359 (363)
T ss_dssp CEEEECSSSSCSEE-----------ESSSEEEESSCCSEEEEEEECSS-SSCCEEEEE
T ss_pred cEEEEeCCCceeee-----------eeeeeeeeccccceeEEEEEecC-CeEEEecce
Confidence 9999999776531 25788999999999999999965 444444443
No 83
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=1.8e-24 Score=167.65 Aligned_cols=159 Identities=18% Similarity=0.318 Sum_probs=121.4
Q ss_pred CCceEEEEEeccCCCC--eeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPP--TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~--~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.+.|.| .+.|+|+|..+..... ......|.|. +.+|+|.|+|.+.|.. ...+.|.|..
T Consensus 13 G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~----~~~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~~~l~V~~- 82 (184)
T 3b5h_A 13 GSKILLTCSLNDSATEVTGHRWLKGGVVLKEDAL----PGQKTEFKVD--SDDQWGEYSCVFLPEP---MGTANIQLHG- 82 (184)
T ss_dssp TTEEEEEEEEESCSSCCCEEEEESSSEEEECTTC----CCSEEEEEEC--GGGCCEEEEEEEESTT---SCEEEEEECC-
T ss_pred CCCEEEEEECCCCCCCceEEEEEeCCEEeecccc----cCCcEEEEEe--chhhCeEEEEEEECCc---CcEEEEEEec-
Confidence 7899999999887777 8999999999875431 1223466666 6899999999999832 2344444432
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
T Consensus 83 -------------------------------------------------------------------------------- 82 (184)
T 3b5h_A 83 -------------------------------------------------------------------------------- 82 (184)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCC-CCeEEEEE---CC-EEccCC
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDP-EPRVSWTK---NG-QPLNSS 233 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p-~p~i~W~~---~g-~~~~~~ 233 (356)
+|.+...+....+.+|+.+.|.|.+.|+| .|.+.|++ ++ ..+...
T Consensus 83 ------------------------------~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~ 132 (184)
T 3b5h_A 83 ------------------------------PPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNG 132 (184)
T ss_dssp ------------------------------SCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTT
T ss_pred ------------------------------CCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecC
Confidence 23333333455788999999999999999 79999999 44 444332
Q ss_pred --CceeEEEeCCEEEEEEccCC-CCCCeEEEEEEEcCCCceEEEEEEec
Q psy12422 234 --NILDLKYKNGVASLQIQEVF-PEDEGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 234 --~~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
.++.+...+....|.|.+++ .+|+|.|+|.|.|..|.....+.|.+
T Consensus 133 ~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 181 (184)
T 3b5h_A 133 SESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 181 (184)
T ss_dssp GGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEE
Confidence 45666666777899999999 99999999999999999988887764
No 84
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.93 E-value=4.9e-26 Score=200.97 Aligned_cols=272 Identities=15% Similarity=0.145 Sum_probs=157.1
Q ss_pred CCceEEEEEecc-CCCC-eeEEeeCCEEcccCC-eeEE---ecCC----eEEEEEeeCCCCCCeEEEEEEEeCCceeEEE
Q psy12422 1 MQNVIKVKVGST-KPPP-TVKWYKGNRELSKRD-YSMS---YSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETN 70 (356)
Q Consensus 1 g~~v~l~C~~~g-~p~~-~v~W~k~g~~l~~~~-~~~~---~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 70 (356)
|+++.|.|.+.| .|.+ .|+|+|||.++.... .... ..++ ...|.|.+++.+|+|.|+|.|.|..+.....
T Consensus 131 g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 210 (438)
T 1qgc_4 131 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIV 210 (438)
T ss_dssp TTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEE
T ss_pred CCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCcee
Confidence 578999999976 7777 899999999987551 1111 1222 2479999999999999999999988775333
Q ss_pred EEEEEeccccchhhhhhcccccccCccceeeeccc--C--Cceeeecccc--cccCCccc-----------cCCCCceEE
Q psy12422 71 CVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIR--P--APAIITTRQE--IKSSYSSH-----------TDDTGRTTT 133 (356)
Q Consensus 71 ~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~--p--~p~i~w~~~~--~~~~~~~~-----------~~~~~~~~~ 133 (356)
. .+................+.+|+.+.|.|.+. | .+.+.|+++. ........ .....+...
T Consensus 211 ~--~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 288 (438)
T 1qgc_4 211 K--SFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTI 288 (438)
T ss_dssp E--EEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEE
T ss_pred c--ccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEE
Confidence 3 33221111111112344588999999999987 3 4579999873 11110000 000111111
Q ss_pred EEeeccccccccccccCCCccceeeeeeccccCCC-CCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEE
Q psy12422 134 QMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDS-PSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAV 212 (356)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~ 212 (356)
. .........+........+.+.|.|...+.... ..........+.+... ...+|.+...+....+.+|+.++|.|.
T Consensus 289 ~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~-~~~~P~v~~~~~~~~~~~g~~v~L~C~ 366 (438)
T 1qgc_4 289 S-RDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAA-KTTPPSVYPLAPGSAAAAASMVTLGCL 366 (438)
T ss_dssp E-EETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSS-CCBCCEEEEECCCGGGCCSSEEEEEEE
T ss_pred E-eecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecC-CCCCCeEEEcCcccccccCCcEEEEEE
Confidence 1 000011111122223333334444433321110 0001111223333211 124455544333445778999999999
Q ss_pred EcCC-CCC-eEEEEECCEEccCCCceeEEEeCCE----EEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 213 VKGD-PEP-RVSWTKNGQPLNSSNILDLKYKNGV----ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 213 ~~g~-p~p-~i~W~~~g~~~~~~~~~~~~~~~~~----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
+.|. |.| .|.|+++|..+......... ..+. +.|.|.++..+| |.|+|.|.|..|.......+.
T Consensus 367 ~~g~~P~~~~v~W~~~g~~~~~~~~~~~~-~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i~ 436 (438)
T 1qgc_4 367 VKGYFPEPVTVTWNSGSLSSGVHTFPAVL-QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 436 (438)
T ss_dssp EESCBSSCCEEEEGGGTCCSSEEECCCEE-ETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEECC
T ss_pred eccccCCCcEEEEecCCCCCceeecCccc-cCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeecC
Confidence 9997 887 89999999876532111111 1221 369999999889 999999999999877766653
No 85
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.93 E-value=1.6e-25 Score=178.42 Aligned_cols=165 Identities=28% Similarity=0.474 Sum_probs=123.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC---CeeEEecCCeE--EEEEeeCCCCCCeEEEEEEEeCCceeE-EEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR---DYSMSYSDGVV--SMEIIDCKPEDSGEYKCVATNKHGTDE-TNCVVI 74 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~---~~~~~~~~~~~--~L~i~~~~~~D~G~Y~C~a~n~~g~~~-~~~~l~ 74 (356)
|+++.|.|.+.|.|.+.|+|+|+|..+... .......++.. .|.|.+++.+|+|.|+|.+.|..|... ..+.|.
T Consensus 24 G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~ 103 (217)
T 2vr9_A 24 NEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQ 103 (217)
T ss_dssp TSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEECCCEEEE
T ss_pred CCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCccccccceEE
Confidence 789999999999999999999999998753 23344444433 237889999999999999999888663 245555
Q ss_pred EeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcc
Q psy12422 75 VESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSK 154 (356)
Q Consensus 75 v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (356)
|...
T Consensus 104 v~~~---------------------------------------------------------------------------- 107 (217)
T 2vr9_A 104 IAVL---------------------------------------------------------------------------- 107 (217)
T ss_dssp ECEE----------------------------------------------------------------------------
T ss_pred EEEe----------------------------------------------------------------------------
Confidence 5321
Q ss_pred ceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE-cCCCCCeEEEEECCEEccCC
Q psy12422 155 KITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV-KGDPEPRVSWTKNGQPLNSS 233 (356)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~~~~~ 233 (356)
+|.+...+....+.+|+.+.|.|.+ .|+|.|.+.|+++|..+...
T Consensus 108 ----------------------------------~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~ 153 (217)
T 2vr9_A 108 ----------------------------------RDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDL 153 (217)
T ss_dssp ----------------------------------CCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCC
T ss_pred ----------------------------------CCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcc
Confidence 1112222334568899999999999 89999999999999988743
Q ss_pred C--------ceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 234 N--------ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 234 ~--------~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
. +... ... ..|.|.+++.+|+|.|+|.|.|..|....+..+.
T Consensus 154 ~~~~~~~~~~~~~-~~~--~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~l 203 (217)
T 2vr9_A 154 KAMSFGASSRVRI-VDG--GNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKL 203 (217)
T ss_dssp CCC---CCCSEEE-ETT--TEEEESSCCSTTCEEEEEEEEETTEEEECCCEEE
T ss_pred cccccccCCcEEe-cCC--CcEEEeeCCHHHCeEEEEEEEcccceeccccEEE
Confidence 2 2211 122 2799999999999999999999999877654443
No 86
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.93 E-value=5.7e-24 Score=190.80 Aligned_cols=264 Identities=13% Similarity=0.108 Sum_probs=148.0
Q ss_pred CCceEEEEEeccCCC----CeeEEeeC--CEEc----c-------------cCCeeEEe--cCCeEEEEEeeCCCCCCeE
Q psy12422 1 MQNVIKVKVGSTKPP----PTVKWYKG--NREL----S-------------KRDYSMSY--SDGVVSMEIIDCKPEDSGE 55 (356)
Q Consensus 1 g~~v~l~C~~~g~p~----~~v~W~k~--g~~l----~-------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~ 55 (356)
|++++|.|.+.+.+. +.+.|||+ |+.+ . ..++.... ..+.++|+|.+++.+|+|.
T Consensus 15 G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~ 94 (512)
T 1zvo_C 15 SETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMSAADTAM 94 (512)
T ss_pred CCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcCCHHHCEE
Confidence 899999999977643 67999995 3211 0 12333222 2346799999999999999
Q ss_pred EEEEEEeCCc----------e---eEEEEEEEEecccc-chhhhhhcc-cc-cccCccceeeeccc---CCc-eeeeccc
Q psy12422 56 YKCVATNKHG----------T---DETNCVVIVESEEE-SKEQQELAH-NF-LYSGDRKYIEKHIR---PAP-AIITTRQ 115 (356)
Q Consensus 56 Y~C~a~n~~g----------~---~~~~~~l~v~~~~~-~~~~~~~~~-~~-~~~g~~~~l~c~~~---p~p-~i~w~~~ 115 (356)
|.|.+.+..+ . ....+.|.|...+. .+....... .. ..+|+.+.|.|.+. |.| .+.|+++
T Consensus 95 Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~p~~v~W~~~ 174 (512)
T 1zvo_C 95 YYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMG 174 (512)
T ss_pred EEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecCceEEEEEcC
Confidence 9999988642 1 12345677764321 111111111 11 23568999999986 554 7999986
Q ss_pred ccccCCcc---ccCCCCc-e----EEEEeec--cccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCC-
Q psy12422 116 EIKSSYSS---HTDDTGR-T----TTQMSTL--SSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPD- 184 (356)
Q Consensus 116 ~~~~~~~~---~~~~~~~-~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 184 (356)
........ .....+. . ....... .+.|.|.+.+...........+ .. .........+.+++.
T Consensus 175 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~g~ytC~v~n~~~~~~~~~~~~---~~----~~~~~~~v~l~~pp~~ 247 (512)
T 1zvo_C 175 TQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRW---PE----SPKAQASSVPTAQPQA 247 (512)
T ss_pred cccCceEecCceecCCCCEEEEEEEEEcHHHcCCceEEEEEEeCCCCceEEEecC---CC----CCCcCCEEEEeCCCch
Confidence 54321100 0111111 1 1111111 5778888766554332211000 00 000000111111100
Q ss_pred --------------------------------------------CCCCCCee-cccCCceeecCCCeEEEEEEEcCCCCC
Q psy12422 185 --------------------------------------------TAMTPPQF-ANKLTDKTIDDGQCLDLSAVVKGDPEP 219 (356)
Q Consensus 185 --------------------------------------------~~~~~p~~-~~~~~~~~v~~g~~~~l~C~~~g~p~p 219 (356)
....+|.+ ...+....+.+|+.++|.|.+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~ 327 (512)
T 1zvo_C 248 EGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLK 327 (512)
T ss_pred hccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEeceECC
Confidence 01234444 334444567789999999999886443
Q ss_pred --eEEEEECCEEccCCCcee-EE-EeCC----EEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 220 --RVSWTKNGQPLNSSNILD-LK-YKNG----VASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 220 --~i~W~~~g~~~~~~~~~~-~~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
.|+|+++|..+....... .. ..++ .+.|.|..+..+|.|.|+|+|.|..+..
T Consensus 328 ~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~ 387 (512)
T 1zvo_C 328 DAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPP 387 (512)
T ss_pred CeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCC
Confidence 799999998865221110 11 1111 2569999999999999999999987743
No 87
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.93 E-value=3e-25 Score=186.30 Aligned_cols=167 Identities=24% Similarity=0.457 Sum_probs=126.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC---eeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE-EEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD---YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN-CVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~---~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~-~~l~v~ 76 (356)
|+++.|.|.+.|.|.|.|+|+|+|..+.... ......++ .|.|.+++.+|+|.|+|.|.|..|..... +.+.|.
T Consensus 123 g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~ 200 (304)
T 2yd9_A 123 TRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSG--ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVR 200 (304)
T ss_dssp TSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTS--CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCe--EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEE
Confidence 7899999999999999999999999986431 22233344 79999999999999999999998876543 455553
Q ss_pred ccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccce
Q psy12422 77 SEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKI 156 (356)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (356)
..
T Consensus 201 ~~------------------------------------------------------------------------------ 202 (304)
T 2yd9_A 201 VQ------------------------------------------------------------------------------ 202 (304)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ee------------------------------------------------------------------------------
Confidence 21
Q ss_pred eeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCce
Q psy12422 157 TRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNIL 236 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~ 236 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+......
T Consensus 203 ------------------------------~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~ 252 (304)
T 2yd9_A 203 ------------------------------NVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDM 252 (304)
T ss_dssp ------------------------------CEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSC
T ss_pred ------------------------------ccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccc
Confidence 12233433444456889999999999999999999999999998765432
Q ss_pred eEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCC
Q psy12422 237 DLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSS 283 (356)
Q Consensus 237 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~ 283 (356)
. .+...|.|.++ +|+|.|+|.|.|..|....++.|.+...+
T Consensus 253 ~----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 293 (304)
T 2yd9_A 253 P----VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLP 293 (304)
T ss_dssp C----BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-----
T ss_pred c----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCc
Confidence 2 34456777766 69999999999999999999988755443
No 88
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.93 E-value=1.7e-25 Score=175.30 Aligned_cols=159 Identities=13% Similarity=0.089 Sum_probs=105.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeE--EEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE--TNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~--~~~~l~v~~~ 78 (356)
|++|+|.|.+.+.|. .+.|||+|..+...............|.|.+++.+|+|.|+|.|.|..|... ..+.|.|...
T Consensus 19 G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~ 97 (196)
T 2d3v_A 19 GNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGF 97 (196)
T ss_dssp TCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECS
T ss_pred CCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCC
Confidence 799999999988866 9999999988753211111234456899999999999999999999876432 3455555431
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
T Consensus 98 -------------------------------------------------------------------------------- 97 (196)
T 2d3v_A 98 -------------------------------------------------------------------------------- 97 (196)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeE
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~ 238 (356)
..+|.+...+ ...+.+|++++|.|.+.+.| +.+.|+|+|..+........
T Consensus 98 ----------------------------~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~ 147 (196)
T 2d3v_A 98 ----------------------------YNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQ 147 (196)
T ss_dssp ----------------------------SCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECE
T ss_pred ----------------------------CCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccc
Confidence 1123333222 23678899999999999998 89999999987753211111
Q ss_pred EE--eCCEEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 239 KY--KNGVASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 239 ~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
.. ......|.|.+++.+|+|.|+|.|.|..+.
T Consensus 148 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 148 LTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp ECTTSCEEEEEECCCCBTTBCEEEEEEEEETTEE
T ss_pred cccCCCceeEEEeeecCcccCeeEEEEEEccCCC
Confidence 11 112368999999999999999999998653
No 89
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.93 E-value=1.4e-25 Score=175.86 Aligned_cols=158 Identities=11% Similarity=0.140 Sum_probs=115.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCce--eEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT--DETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~--~~~~~~l~v~~~ 78 (356)
|++|+|.|.+.+ |.+.+.|+|+|..+...............|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|.+.
T Consensus 19 G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~ 97 (196)
T 3p2t_A 19 GNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGA 97 (196)
T ss_dssp TCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECS
T ss_pred CCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCC
Confidence 789999999988 77899999999887643221222244568999999999999999999999873 244455655432
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
T Consensus 98 -------------------------------------------------------------------------------- 97 (196)
T 3p2t_A 98 -------------------------------------------------------------------------------- 97 (196)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee-
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD- 237 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~- 237 (356)
..+|.+...+.. .+.+|+.++|.|.+.+ +++.+.|+|+|..+.......
T Consensus 98 ----------------------------~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~ 147 (196)
T 3p2t_A 98 ----------------------------YSKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSE 147 (196)
T ss_dssp ----------------------------SCCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEE
T ss_pred ----------------------------CCCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeeccc
Confidence 122333333332 5789999999999987 456899999998775433221
Q ss_pred EEEeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 238 LKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 238 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
.........|.|.+++.+|+|.|+|.|.|..+
T Consensus 148 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 148 HGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred ccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 11223346899999999999999999999886
No 90
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.93 E-value=7.4e-25 Score=172.56 Aligned_cols=164 Identities=15% Similarity=0.117 Sum_probs=120.6
Q ss_pred CCceEEEEEeccCCC-----CeeEEee-CCEEcccCCeeEEecC----CeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE
Q psy12422 1 MQNVIKVKVGSTKPP-----PTVKWYK-GNRELSKRDYSMSYSD----GVVSMEIIDCKPEDSGEYKCVATNKHGTDETN 70 (356)
Q Consensus 1 g~~v~l~C~~~g~p~-----~~v~W~k-~g~~l~~~~~~~~~~~----~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 70 (356)
|+++.|.|.+.+.|. +.+.|+| ++.......+.....+ +..+|.|.+++.+|+|.|+|.+.|..+.....
T Consensus 17 G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~ 96 (202)
T 3bp6_B 17 GSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWDYKY 96 (202)
T ss_dssp TSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcceEE
Confidence 789999999999887 8899999 4443332222222222 56799999999999999999999999888888
Q ss_pred EEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccC
Q psy12422 71 CVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNAT 150 (356)
Q Consensus 71 ~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (356)
+.|.|...+.
T Consensus 97 ~~l~V~~~~~---------------------------------------------------------------------- 106 (202)
T 3bp6_B 97 LTVKVKASYM---------------------------------------------------------------------- 106 (202)
T ss_dssp EEEEEEBCCC----------------------------------------------------------------------
T ss_pred EEEEecCCCC----------------------------------------------------------------------
Confidence 8887764310
Q ss_pred CCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEc
Q psy12422 151 SPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPL 230 (356)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~ 230 (356)
.|.+.. ..+.+|+.+.|.|.+.|+|.|.+.|++++..+
T Consensus 107 --------------------------------------~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~ 144 (202)
T 3bp6_B 107 --------------------------------------RIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPA 144 (202)
T ss_dssp --------------------------------------CEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCC
T ss_pred --------------------------------------cccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCc
Confidence 111110 13456999999999999999999999987654
Q ss_pred cCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 231 NSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 231 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
.. ......++....+.|.+++.+|+|.|+|.|.|..|.....+.+.
T Consensus 145 ~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~ 190 (202)
T 3bp6_B 145 NT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIID 190 (202)
T ss_dssp EE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEEC
T ss_pred cC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEE
Confidence 31 11111223345778889999999999999999999999888886
No 91
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.93 E-value=2e-25 Score=177.16 Aligned_cols=170 Identities=27% Similarity=0.461 Sum_probs=124.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC-----eeEEecCCeE---EEEEeeCCCCCCeEEEEEEEeCCcee-EEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD-----YSMSYSDGVV---SMEIIDCKPEDSGEYKCVATNKHGTD-ETNC 71 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-----~~~~~~~~~~---~L~i~~~~~~D~G~Y~C~a~n~~g~~-~~~~ 71 (356)
|+++.|.|.+.|.|.+.++|||+|..+.... ......++.. .|.|.+++.+|+|.|+|.+.|..|.. ...+
T Consensus 24 G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 103 (212)
T 2v9r_A 24 GEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDA 103 (212)
T ss_dssp TCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEECCCE
T ss_pred CCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCceeecce
Confidence 7899999999999999999999999986432 2233344422 34556779999999999999988765 3345
Q ss_pred EEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCC
Q psy12422 72 VVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATS 151 (356)
Q Consensus 72 ~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (356)
.|.|...
T Consensus 104 ~l~V~~~------------------------------------------------------------------------- 110 (212)
T 2v9r_A 104 SLEVAIL------------------------------------------------------------------------- 110 (212)
T ss_dssp EEEECEE-------------------------------------------------------------------------
T ss_pred EEEEEec-------------------------------------------------------------------------
Confidence 5555421
Q ss_pred CccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE-cCCCCCeEEEEECCEEc
Q psy12422 152 PSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV-KGDPEPRVSWTKNGQPL 230 (356)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~~ 230 (356)
++.+...+....+.+|+.+.|.|.+ .|+|.|.+.|+++|..+
T Consensus 111 -------------------------------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l 153 (212)
T 2v9r_A 111 -------------------------------------RDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPL 153 (212)
T ss_dssp -------------------------------------CSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEE
T ss_pred -------------------------------------cccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccC
Confidence 1112222334568899999999999 89999999999999998
Q ss_pred cCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEE-EEEecCCCC
Q psy12422 231 NSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTPLNSS 283 (356)
Q Consensus 231 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~p~~~~ 283 (356)
....... ...++ .|.|.+++.+|+|.|+|.|.|..|..... +.|.+...|
T Consensus 154 ~~~~~~~-~~~~~--~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 154 DDKDERI-TIRGG--KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERP 204 (212)
T ss_dssp CTTSTTE-EEETT--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CCCcceE-EccCC--eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCc
Confidence 7654322 22333 89999999999999999999999986553 566544333
No 92
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.93 E-value=6.9e-26 Score=191.76 Aligned_cols=249 Identities=14% Similarity=0.151 Sum_probs=145.2
Q ss_pred CCceEEEEEeccC-C-CCeeEEeeCCEEcccCCe--eEEecCCeE----EEEEeeCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12422 1 MQNVIKVKVGSTK-P-PPTVKWYKGNRELSKRDY--SMSYSDGVV----SMEIIDCKPEDSGEYKCVATNKHGTDETNCV 72 (356)
Q Consensus 1 g~~v~l~C~~~g~-p-~~~v~W~k~g~~l~~~~~--~~~~~~~~~----~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 72 (356)
|+++.|.|.+.|. | .+.|+|+|||+++..... .....++.+ .|.|.++..+|+|.|+|.|.|..+.....+.
T Consensus 24 ~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 103 (323)
T 2wqr_A 24 PPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTK 103 (323)
T ss_dssp CSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeee
Confidence 3699999999875 4 478999999999875421 112224432 5788888888999999999998876554433
Q ss_pred EEEeccccchhh--hhhcccccccCccceeeeccc---CCc---eeeecccccccCCcccc----CCCCceE----EE--
Q psy12422 73 VIVESEEESKEQ--QELAHNFLYSGDRKYIEKHIR---PAP---AIITTRQEIKSSYSSHT----DDTGRTT----TQ-- 134 (356)
Q Consensus 73 l~v~~~~~~~~~--~~~~~~~~~~g~~~~l~c~~~---p~p---~i~w~~~~~~~~~~~~~----~~~~~~~----~~-- 134 (356)
+.+......+.. .......+.+|+.+.|.|.+. |.| .+.|++++......... ...+... ..
T Consensus 104 ~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~ 183 (323)
T 2wqr_A 104 KCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVG 183 (323)
T ss_dssp CCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECC
T ss_pred cCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEEC
Confidence 211111111110 111122367899999999976 445 79999976443221100 0111100 00
Q ss_pred --EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEE
Q psy12422 135 --MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAV 212 (356)
Q Consensus 135 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~ 212 (356)
...+.+.|.|.+.+... .......+... .....+|.+...+.......|+.++|.|.
T Consensus 184 ~~~~~D~G~Y~C~a~n~~~--------------------~~~~~~~v~~~-~~~~~~P~v~~~~~~~~~~~g~~~~l~C~ 242 (323)
T 2wqr_A 184 TRDWIEGETYQCRVTHPHL--------------------PRALMRSTTKT-SGPRAAPEVYAFATPEWPGSRDKRTLACL 242 (323)
T ss_dssp HHHHHTTCCEEEEEECTTS--------------------SSCEEEEECCC-CSCCBCCEEEEEECCCCTTCTTEEEEEEE
T ss_pred HHHccCCCCEEEEEECCCC--------------------CCCeeeEEEcc-CCCCCCCEEEEeCCChHHhcCCcEEEEEE
Confidence 11223445555432210 01112222111 01134566544332222234999999999
Q ss_pred EcC-CCCC-eEEEEECCEEccCCCcee---EEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 213 VKG-DPEP-RVSWTKNGQPLNSSNILD---LKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 213 ~~g-~p~p-~i~W~~~g~~~~~~~~~~---~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
+.| +|++ .|.|++||..+....... ....++ .+.|.|..+..+|+|.|+|.|.|....
T Consensus 243 ~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 243 IQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred eeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 988 4443 799999999886542110 011111 257999999999999999999999887
No 93
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.93 E-value=2.1e-25 Score=175.08 Aligned_cols=158 Identities=14% Similarity=0.136 Sum_probs=108.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCC-ce--eEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKH-GT--DETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~-g~--~~~~~~l~v~~ 77 (356)
|++|+|.|.+.+.|. .++|+|+|..+...............|.|.+++.+|+|.|+|.|.|.. |. .+..+.|.|.+
T Consensus 19 G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 19 GSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTG 97 (198)
T ss_dssp TCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEEC
T ss_pred CCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcc
Confidence 789999999988876 799999998874211001111122379999999999999999999987 52 24445666643
Q ss_pred cccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
.
T Consensus 98 ~------------------------------------------------------------------------------- 98 (198)
T 1ugn_A 98 A------------------------------------------------------------------------------- 98 (198)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD 237 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~ 237 (356)
..+|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+.......
T Consensus 99 -----------------------------~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~ 147 (198)
T 1ugn_A 99 -----------------------------YIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNS 147 (198)
T ss_dssp -----------------------------SCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC
T ss_pred -----------------------------ccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccc
Confidence 1123332222 2467899999999999988 78999999998775332111
Q ss_pred -EE-EeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 238 -LK-YKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 238 -~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
.. .......|.|.+++.+|+|.|+|.|.|..+
T Consensus 148 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 148 QPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp ------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred cccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 11 122357899999999999999999999876
No 94
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.93 E-value=1.5e-24 Score=172.82 Aligned_cols=165 Identities=22% Similarity=0.288 Sum_probs=127.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCcee-EEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD-ETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.|.|.+.|+|||+|..+.... ...|.|.+++.+|+|.|+|.+.|..|.. +..+.|.|...+
T Consensus 33 G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~--------~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~ 104 (218)
T 3k0w_A 33 GQFVKLCCRATGHPFVQYQWFKMNKEIPNGN--------TSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIP 104 (218)
T ss_dssp TSBEEEECEETTTTSSEEEEEETTEECTTCC--------SSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCC
T ss_pred CCcEEEEeeecCCCCCEEEEEECCEECCCCC--------CCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccC
Confidence 7899999999999999999999999886432 2379999999999999999999987755 445677776432
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
......
T Consensus 105 ~~~~~~-------------------------------------------------------------------------- 110 (218)
T 3k0w_A 105 ESFQRS-------------------------------------------------------------------------- 110 (218)
T ss_dssp GGGCTT--------------------------------------------------------------------------
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 110000
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEE
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLK 239 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~ 239 (356)
.......+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+.....
T Consensus 111 ----------------------~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~---- 164 (218)
T 3k0w_A 111 ----------------------VDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK---- 164 (218)
T ss_dssp ----------------------CCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCS----
T ss_pred ----------------------cccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCC----
Confidence 000002345666666777899999999999999999999999999998875432
Q ss_pred EeCCEEEEEEccCCCCCCeEEEEEEEcCCCc-eEEEEEEe
Q psy12422 240 YKNGVASLQIQEVFPEDEGVYVCTATNSLGT-AETKCKLT 278 (356)
Q Consensus 240 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~ 278 (356)
..|.|.+++.+|+|.|+|.|.|..|. ....+.|.
T Consensus 165 -----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 199 (218)
T 3k0w_A 165 -----KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEII 199 (218)
T ss_dssp -----SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEE
T ss_pred -----CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEE
Confidence 37999999999999999999999887 33344444
No 95
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.93 E-value=7.2e-25 Score=174.01 Aligned_cols=172 Identities=16% Similarity=0.139 Sum_probs=115.7
Q ss_pred CceEEEEEeccCCCCeeEEee---CCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE-EEEEEec
Q psy12422 2 QNVIKVKVGSTKPPPTVKWYK---GNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN-CVVIVES 77 (356)
Q Consensus 2 ~~v~l~C~~~g~p~~~v~W~k---~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~-~~l~v~~ 77 (356)
++++|.|.+.+ |.+.++|+| ||..+..........++ .|.|.+++.+|+|.|+|.|.|..+...+. +.|.|..
T Consensus 25 ~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~--~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~ 101 (213)
T 2x1w_L 25 KTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK--GFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVG 101 (213)
T ss_dssp CEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT--EEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECB
T ss_pred ccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc--cEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeC
Confidence 89999999976 789999998 47777654322222333 69999999999999999998854333222 4444421
Q ss_pred cccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCcccee
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKIT 157 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
.
T Consensus 102 ~------------------------------------------------------------------------------- 102 (213)
T 2x1w_L 102 Y------------------------------------------------------------------------------- 102 (213)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecc-cCCceeecCCCeEEEEEEEcCCCC--CeEEEEECCEEccCCC
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFAN-KLTDKTIDDGQCLDLSAVVKGDPE--PRVSWTKNGQPLNSSN 234 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~~~l~C~~~g~p~--p~i~W~~~g~~~~~~~ 234 (356)
.+|.+.. .+..+.+.+|++++|.|.+.|.|. +.+.|+++|..+....
T Consensus 103 ------------------------------~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~ 152 (213)
T 2x1w_L 103 ------------------------------RIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKK 152 (213)
T ss_dssp ------------------------------CEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEE
T ss_pred ------------------------------cccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEE
Confidence 0111111 123347889999999999998654 5799999887654321
Q ss_pred c-eeEEE-------eCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCcc
Q psy12422 235 I-LDLKY-------KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNI 285 (356)
Q Consensus 235 ~-~~~~~-------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~ 285 (356)
. ..... ....++|.|.+++.+|+|.|+|.|.|..|.....+.|.+...+.|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 153 LVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211 (213)
T ss_dssp EEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----
T ss_pred EeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccccc
Confidence 1 00000 112357999999999999999999999999999988886655543
No 96
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.93 E-value=4.4e-25 Score=175.41 Aligned_cols=166 Identities=16% Similarity=0.315 Sum_probs=121.6
Q ss_pred CCceEEEEEeccCC----CCeeEEee----------------CCEEccc------CCeeEEe---cCCeEEEEEeeCCCC
Q psy12422 1 MQNVIKVKVGSTKP----PPTVKWYK----------------GNRELSK------RDYSMSY---SDGVVSMEIIDCKPE 51 (356)
Q Consensus 1 g~~v~l~C~~~g~p----~~~v~W~k----------------~g~~l~~------~~~~~~~---~~~~~~L~i~~~~~~ 51 (356)
|+++.|.|.+.+.| .+.|.|+| +|..+.. .+..... ..+..+|.|.+++.+
T Consensus 15 G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~ 94 (214)
T 3jz7_A 15 GETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQLS 94 (214)
T ss_dssp TSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECSCCGG
T ss_pred CCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEccCChh
Confidence 78999999998877 46999998 4444431 1211111 124558999999999
Q ss_pred CCeEEEEEEEeCCceeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCce
Q psy12422 52 DSGEYKCVATNKHGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRT 131 (356)
Q Consensus 52 D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~ 131 (356)
|+|.|+|.+.|..|.....+.|.|..++..
T Consensus 95 D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~-------------------------------------------------- 124 (214)
T 3jz7_A 95 DIGTYQCKVKKAPGVANKKFLLTVLVKPSG-------------------------------------------------- 124 (214)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEECCCBS--------------------------------------------------
T ss_pred hCeEEEEEEEeCCCccccEEEEEEEcCCCC--------------------------------------------------
Confidence 999999999999998888888888643110
Q ss_pred EEEEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEE
Q psy12422 132 TTQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSA 211 (356)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C 211 (356)
...+....+.+|+.+.|.|
T Consensus 125 -------------------------------------------------------------~~~~~~~~~~~g~~v~l~C 143 (214)
T 3jz7_A 125 -------------------------------------------------------------TRCFVDGSEEIGNDFKLKC 143 (214)
T ss_dssp -------------------------------------------------------------CEEEEESCCBTTCCEEEEE
T ss_pred -------------------------------------------------------------ceeeeecceecCCcEEEEe
Confidence 0001112367899999999
Q ss_pred EE-cCCCCCeEEEEECC--EEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCC
Q psy12422 212 VV-KGDPEPRVSWTKNG--QPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLN 281 (356)
Q Consensus 212 ~~-~g~p~p~i~W~~~g--~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~ 281 (356)
.+ .|+|.|.+.|++++ ..+..... .. .....|.|.+++.+|+|.|+|.|.|..|....++.|.+..
T Consensus 144 ~~~~g~p~~~v~W~~~~~~~~~~~~~~--~~--~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 212 (214)
T 3jz7_A 144 EPKEGSLPLQFEWQKLSDSQTMPTPWL--AE--MTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212 (214)
T ss_dssp ECSBCCSSCEEEEEECSTTCCCCGGGG--GG--TTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred cCCCCCCCCEEEEEECCCCCccCccce--ec--cCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeC
Confidence 99 89999999999954 33332211 11 1223899999999999999999999999999988887553
No 97
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.93 E-value=3.8e-25 Score=174.02 Aligned_cols=168 Identities=21% Similarity=0.340 Sum_probs=124.4
Q ss_pred CCceEEEEE-eccCCC-CeeEEeeCCEEccc---CCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE---EE
Q psy12422 1 MQNVIKVKV-GSTKPP-PTVKWYKGNRELSK---RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN---CV 72 (356)
Q Consensus 1 g~~v~l~C~-~~g~p~-~~v~W~k~g~~l~~---~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~---~~ 72 (356)
|+++.|.|. +.+.|. +.++|+|++..+.. ........+ ..|.|.+++.+|+|.|+|.+.|..+..... +.
T Consensus 23 G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~ 100 (201)
T 3s97_C 23 GKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTN--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 100 (201)
T ss_dssp TCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTT--CCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEE
T ss_pred CCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCC--CeEEECcCCcccCeEEEEEEEecCCCcchhhcccc
Confidence 789999999 889998 99999999988742 222222223 379999999999999999999976554431 22
Q ss_pred EEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCC
Q psy12422 73 VIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSP 152 (356)
Q Consensus 73 l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (356)
+.+....
T Consensus 101 ~~~~~~~------------------------------------------------------------------------- 107 (201)
T 3s97_C 101 LIPIPER------------------------------------------------------------------------- 107 (201)
T ss_dssp EEEECCS-------------------------------------------------------------------------
T ss_pred eeecccc-------------------------------------------------------------------------
Confidence 2221100
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccC
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNS 232 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~ 232 (356)
.....+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+..
T Consensus 108 -------------------------------~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~ 156 (201)
T 3s97_C 108 -------------------------------TTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPS 156 (201)
T ss_dssp -------------------------------SCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCT
T ss_pred -------------------------------ccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCC
Confidence 0002234444444467789999999999999999999999999987764
Q ss_pred CCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 233 SNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 233 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
.. ..... ...|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 157 ~~--~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 198 (201)
T 3s97_C 157 TA--EISTS--GAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIY 198 (201)
T ss_dssp TC--EEETT--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ce--eecCC--CCEEEEccCChhhCEEEEEEEEecCCceeeeEEEE
Confidence 42 22222 34899999999999999999999999988887775
No 98
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.93 E-value=3.4e-25 Score=175.83 Aligned_cols=158 Identities=21% Similarity=0.305 Sum_probs=116.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcc-----------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc--ee
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELS-----------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG--TD 67 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~-----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g--~~ 67 (356)
|+++.|.|.+.+.|.+.+.|+|++..+. .........+ ..|.|.+++.+|+|.|+|.+.|..| ..
T Consensus 16 G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~ 93 (212)
T 1f97_A 16 NESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS--SGITFSSVTRKDNGEYTCMVSEEGGQNYG 93 (212)
T ss_dssp TCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET--TEEEESCCCGGGCEEEEEEEEETTSSSEE
T ss_pred CCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec--eeEEEcccCcccCeEEEEEEEccCCCccc
Confidence 7899999999999999999999876531 1011122223 3899999999999999999999876 44
Q ss_pred EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecccccccccc
Q psy12422 68 ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTN 147 (356)
Q Consensus 68 ~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (356)
...+.|.|..++.
T Consensus 94 ~~~~~l~V~~~p~------------------------------------------------------------------- 106 (212)
T 1f97_A 94 EVSIHLTVLVPPS------------------------------------------------------------------- 106 (212)
T ss_dssp EEEEEEEEEBCCC-------------------------------------------------------------------
T ss_pred EEEEEEEEEcCCC-------------------------------------------------------------------
Confidence 5666666653211
Q ss_pred ccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEE-EcCCCCCeEEEEEC
Q psy12422 148 NATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAV-VKGDPEPRVSWTKN 226 (356)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~-~~g~p~p~i~W~~~ 226 (356)
+...+....+.+|+.+.|.|. +.++|.|.+.|+++
T Consensus 107 --------------------------------------------~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~ 142 (212)
T 1f97_A 107 --------------------------------------------KPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKD 142 (212)
T ss_dssp --------------------------------------------CCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEET
T ss_pred --------------------------------------------CcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeC
Confidence 111111235788999999999 79999999999999
Q ss_pred CE-EccCCCce-------eEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 227 GQ-PLNSSNIL-------DLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 227 g~-~~~~~~~~-------~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
+. .+...... ..........|.|.+++.+|+|.|+|.|.|..|..
T Consensus 143 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 143 GISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp TEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCC
T ss_pred CcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCc
Confidence 98 77654321 22233334589999999999999999999999987
No 99
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.92 E-value=2.6e-25 Score=189.20 Aligned_cols=173 Identities=24% Similarity=0.392 Sum_probs=132.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCe--eEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDY--SMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.+.|.|+|+|..+..... ......+..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...
T Consensus 138 g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 217 (334)
T 1ry7_B 138 ANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLER 217 (334)
T ss_dssp TCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecC
Confidence 78899999999999999999999998875421 1223334458999999999999999999999998888888888643
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
+.
T Consensus 218 ~~------------------------------------------------------------------------------ 219 (334)
T 1ry7_B 218 SP------------------------------------------------------------------------------ 219 (334)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 11
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecc-cCCceeecCCCeEEEEEEEcCCCCCeEEEEE----CCEEccCC
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFAN-KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK----NGQPLNSS 233 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~----~g~~~~~~ 233 (356)
.+|.+.. .+....+.+|+.+.|.|.+.|+|.|.+.|++ +|..+...
T Consensus 220 -----------------------------~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~ 270 (334)
T 1ry7_B 220 -----------------------------HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPD 270 (334)
T ss_dssp -----------------------------SSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTT
T ss_pred -----------------------------CCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCC
Confidence 1121211 2345678899999999999999999999999 67766543
Q ss_pred CceeEE--E-------eCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 234 NILDLK--Y-------KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 234 ~~~~~~--~-------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
...... . ......|.|.+++.+|+|.|+|.|.|..|....++.|.+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 326 (334)
T 1ry7_B 271 GTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVL 326 (334)
T ss_dssp SSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEE
T ss_pred CCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEE
Confidence 321111 1 1112479999999999999999999999999998888744
No 100
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.92 E-value=4.7e-25 Score=183.86 Aligned_cols=166 Identities=25% Similarity=0.422 Sum_probs=125.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC--CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeE--EEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR--DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE--TNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~--~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~--~~~~l~v~ 76 (356)
|+++.|.|.+.|.|.|.+.|+|+|..+... .......++ .|.|.+++.+|+|.|+|.|.|..+... ..+.|.|.
T Consensus 115 g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~ 192 (291)
T 1qz1_A 115 GEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVN 192 (291)
T ss_dssp TSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTS--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEE
T ss_pred CCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCC--cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEe
Confidence 789999999999999999999999887532 222233444 799999999999999999999754432 33444443
Q ss_pred ccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccce
Q psy12422 77 SEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKI 156 (356)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (356)
.++
T Consensus 193 ~~p----------------------------------------------------------------------------- 195 (291)
T 1qz1_A 193 VPP----------------------------------------------------------------------------- 195 (291)
T ss_dssp EEE-----------------------------------------------------------------------------
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 221
Q ss_pred eeeeeccccCCCCCcccccceeeecCCCCCCCCCeecc--cCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC
Q psy12422 157 TRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFAN--KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN 234 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~ 234 (356)
.+.. .+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+....
T Consensus 196 ----------------------------------~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~ 241 (291)
T 1qz1_A 196 ----------------------------------TVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEE 241 (291)
T ss_dssp ----------------------------------EEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC-
T ss_pred ----------------------------------cccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCC
Confidence 1111 1123467789999999999999999999999999987654
Q ss_pred c--eeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEec
Q psy12422 235 I--LDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 235 ~--~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
. ..+........|.|.+++.+|+|.|+|.|.|..|.....+.|.+
T Consensus 242 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 288 (291)
T 1qz1_A 242 EDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKV 288 (291)
T ss_dssp -CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEE
Confidence 1 12333344458999999999999999999999999988888764
No 101
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.92 E-value=7e-24 Score=167.74 Aligned_cols=158 Identities=22% Similarity=0.340 Sum_probs=119.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-------------------CeeEEecCCeEEEEEeeCCCCCCeEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-------------------DYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 61 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-------------------~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 61 (356)
|+++.|.|...+.|.+.+.|||++...... .+.....++ +|.|.+++.+|+|.|+|.+.
T Consensus 14 G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~--~L~i~~v~~~D~G~Y~C~~~ 91 (208)
T 3r4d_A 14 DNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG--SLLFQMITMKDMGVYTLDMT 91 (208)
T ss_dssp TCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTS--CEEECSCCGGGCEEEEEEEE
T ss_pred CCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCC--eEEEccccccCCeEEEEEEE
Confidence 799999999988899999999975432211 111122223 69999999999999999999
Q ss_pred eCC-ceeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccc
Q psy12422 62 NKH-GTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSS 140 (356)
Q Consensus 62 n~~-g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (356)
|.. +.....+.|.|..+
T Consensus 92 ~~~~~~~~~~~~l~V~~~-------------------------------------------------------------- 109 (208)
T 3r4d_A 92 DENYRRTQATVRFHVHQP-------------------------------------------------------------- 109 (208)
T ss_dssp CSSCEEEEEEEEEEEECC--------------------------------------------------------------
T ss_pred cccCceeEEEEEEEeccC--------------------------------------------------------------
Confidence 984 55566666766532
Q ss_pred cccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCe
Q psy12422 141 NYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPR 220 (356)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~ 220 (356)
...|.+...... +.+|+.+.|.|.+.+.| |.
T Consensus 110 ----------------------------------------------~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~ 140 (208)
T 3r4d_A 110 ----------------------------------------------VTQPFLQVTNTT--VKELDSVTLTCLSNDIG-AN 140 (208)
T ss_dssp ----------------------------------------------CCCCEEEESCSS--CCTTCCEEEEEECSCTT-CE
T ss_pred ----------------------------------------------CCCCEEecCCce--EeeCCCEEEEEECCCCC-Cc
Confidence 112333322222 77899999999999866 79
Q ss_pred EEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEE
Q psy12422 221 VSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAET 273 (356)
Q Consensus 221 i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 273 (356)
+.|+++|..+....++.....+ .+|.|.+++.+|+|.|+|.|.|..|....
T Consensus 141 i~W~~~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s 191 (208)
T 3r4d_A 141 IQWLFNSQSLQLTERMTLSQNN--SILRIDPIKREDAGEYQCEISNPVSVRRS 191 (208)
T ss_dssp EEEEETTEECCCCSSEEEETTT--TEEEESSCCGGGCEEEEEEEECTTCCEEC
T ss_pred eEEEECCEeCCCCCCeEEcCCC--CEEEEeccCHHhCeEEEEEEecCCCcccC
Confidence 9999999999877666554333 48999999999999999999999998665
No 102
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.92 E-value=1.4e-24 Score=185.27 Aligned_cols=263 Identities=16% Similarity=0.172 Sum_probs=148.4
Q ss_pred CCceEEEEEeccC--CCCeeEEeeC--CEEcc------------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTK--PPPTVKWYKG--NRELS------------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~--p~~~v~W~k~--g~~l~------------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++++|.|.+.+. |.+.|.|||+ |..+. ..++.+.. ..+..+|+|.+++.+|+|.|
T Consensus 15 G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 94 (344)
T 1za6_B 15 GASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSEDTAVY 94 (344)
T ss_dssp TCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcccCEEE
Confidence 7899999999876 3678999996 43220 12333332 24567999999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEeccc-cchhhh-hhcccccccCccceeeeccc---CC-ceeeecccccccCCcc---ccCC
Q psy12422 57 KCVATNKHGTDETNCVVIVESEE-ESKEQQ-ELAHNFLYSGDRKYIEKHIR---PA-PAIITTRQEIKSSYSS---HTDD 127 (356)
Q Consensus 57 ~C~a~n~~g~~~~~~~l~v~~~~-~~~~~~-~~~~~~~~~g~~~~l~c~~~---p~-p~i~w~~~~~~~~~~~---~~~~ 127 (356)
.|.+.|..+.....+.|.|...+ ..+... ..+...+.+|+.+.|.|.+. |. +.+.|++++....... ....
T Consensus 95 ~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~ 174 (344)
T 1za6_B 95 FCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS 174 (344)
T ss_dssp EEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECT
T ss_pred EEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECC
Confidence 99999966555556778887422 111111 11223467999999999986 54 6899999876532110 0111
Q ss_pred CCceE----EEEee---ccccccccccccCCCcccee-eeee------ccccCCCCCcccccceeeecCCCCCCCCCeec
Q psy12422 128 TGRTT----TQMST---LSSNYSSSTNNATSPSKKIT-RRMN------SILDTDSPSRSRSTTKELIMPPDTAMTPPQFA 193 (356)
Q Consensus 128 ~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 193 (356)
.+... ..... ..+.|.|.+.+......... .... .+..+. ....+.. ......+|.+.
T Consensus 175 ~~~~~~~s~L~i~~~~~~dG~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~-------~~~~l~~-~~~~~~~P~v~ 246 (344)
T 1za6_B 175 SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCG-------GGSSGGG-SGGQPREPQVY 246 (344)
T ss_dssp TSCEEEEEEEEEETTHHHHBCEEEEEEEGGGTEEEEEEECCCCC----------------------------CCBCCEEE
T ss_pred CCCEEEEEEEEEcHHHcCCCcEEEEEEeCCCCccceEeecccccccccccCCCC-------CCccccc-cCCCCcCCEEE
Confidence 11110 11110 12677777654432210000 0000 000000 0000000 00113456655
Q ss_pred ccCCceeecCCCeEEEEEEEcCC-C-CCeEEEEECCEEccCCCceeEEEe-CC----EEEEEEccCCCCCCeEEEEEEEc
Q psy12422 194 NKLTDKTIDDGQCLDLSAVVKGD-P-EPRVSWTKNGQPLNSSNILDLKYK-NG----VASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 194 ~~~~~~~v~~g~~~~l~C~~~g~-p-~p~i~W~~~g~~~~~~~~~~~~~~-~~----~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+......+|+.++|.|.+.|+ | .+.+.|++||..+........... ++ .+.|.|.....+|.|.|+|.|.|
T Consensus 247 ~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~ 326 (344)
T 1za6_B 247 TLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMH 326 (344)
T ss_dssp EECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEEC
T ss_pred EeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEc
Confidence 43322223356679999999885 4 357999999988764322111111 11 24567777777789999999999
Q ss_pred CCCce
Q psy12422 267 SLGTA 271 (356)
Q Consensus 267 ~~g~~ 271 (356)
.....
T Consensus 327 ~~l~~ 331 (344)
T 1za6_B 327 EALHN 331 (344)
T ss_dssp TTSTT
T ss_pred CCCCC
Confidence 87653
No 103
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.92 E-value=6e-25 Score=174.66 Aligned_cols=154 Identities=13% Similarity=0.045 Sum_probs=110.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeE--EEEEeeCCCCCCeEEEEEEEeCCceeE--EEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVV--SMEIIDCKPEDSGEYKCVATNKHGTDE--TNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~--~L~i~~~~~~D~G~Y~C~a~n~~g~~~--~~~~l~v~ 76 (356)
|++|+|.|.+.+ |.+.|.|||+|..+.............. .|.|.+++.+|+|.|+|.+.|..|... ..+.|.|.
T Consensus 23 G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~ 101 (218)
T 1uct_A 23 DGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT 101 (218)
T ss_dssp TCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEE
T ss_pred CCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEc
Confidence 789999999987 6889999999876643211111112223 799999999999999999999865332 23445443
Q ss_pred ccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccce
Q psy12422 77 SEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKI 156 (356)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (356)
+.
T Consensus 102 ~~------------------------------------------------------------------------------ 103 (218)
T 1uct_A 102 GL------------------------------------------------------------------------------ 103 (218)
T ss_dssp CS------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 21
Q ss_pred eeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCce
Q psy12422 157 TRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNIL 236 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~ 236 (356)
..+|.+...+ ...+.+|++++|.|.+.+.|.+.+.|+|+|..+...
T Consensus 104 ------------------------------~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~--- 149 (218)
T 1uct_A 104 ------------------------------YGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ--- 149 (218)
T ss_dssp ------------------------------SCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS---
T ss_pred ------------------------------ccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc---
Confidence 2234443333 346889999999997777888999999999876542
Q ss_pred eEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 237 DLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 237 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
.........|.|.+++.+|+|.|+|.|.|..
T Consensus 150 -~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 150 -HQSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp -EEECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred -ccCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 1122334689999999999999999999874
No 104
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.92 E-value=6.3e-25 Score=168.57 Aligned_cols=149 Identities=13% Similarity=0.173 Sum_probs=110.4
Q ss_pred CCceEEEEEecc--CCCCeeEEeeCCEEcc----------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCcee-
Q psy12422 1 MQNVIKVKVGST--KPPPTVKWYKGNRELS----------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD- 67 (356)
Q Consensus 1 g~~v~l~C~~~g--~p~~~v~W~k~g~~l~----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~- 67 (356)
|++|+|.|...+ .|.+.|+|||++..+. ...+.....++ +|.|.+++.+|+|.|+|.|.|..|..
T Consensus 11 G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g--sL~I~~v~~~D~G~Y~C~~~n~~g~~~ 88 (176)
T 1hng_A 11 GHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG--DLKIKNLTRDDSGTYNVTVYSTNGTRI 88 (176)
T ss_dssp TSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS--CEEESSCCGGGCEEEEEEEEETTCCEE
T ss_pred CCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC--cEEEcccccccCEEEEEEEEeCCCCEE
Confidence 789999995433 5677899999997653 11122223445 59999999999999999999998886
Q ss_pred -EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccc
Q psy12422 68 -ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSST 146 (356)
Q Consensus 68 -~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (356)
...+.|.|..+
T Consensus 89 ~~~~~~l~V~~~-------------------------------------------------------------------- 100 (176)
T 1hng_A 89 LNKALDLRILEM-------------------------------------------------------------------- 100 (176)
T ss_dssp EEEEEEEEEECC--------------------------------------------------------------------
T ss_pred EEEEEEEEEeCC--------------------------------------------------------------------
Confidence 55566666532
Q ss_pred cccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEEC
Q psy12422 147 NNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKN 226 (356)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~ 226 (356)
...|.+. ..+..+.|.|.+.|.|+|.|.|+++
T Consensus 101 ----------------------------------------~~~p~i~--------~~~~~v~L~C~~~g~p~p~i~W~~~ 132 (176)
T 1hng_A 101 ----------------------------------------VSKPMIY--------WECSNATLTCEVLEGTDVELKLYQG 132 (176)
T ss_dssp ----------------------------------------CCCCEEE--------EETTTTEEEEECSSCSSCEEEEEET
T ss_pred ----------------------------------------CCCCEEE--------ecCCcEEEEEEecCCCCcEEEEEEC
Confidence 1112221 1133589999999999999999999
Q ss_pred CEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 227 GQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 227 g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
|..+..... +.|.+++.+|+|.|+|.|.|..|.......+.
T Consensus 133 g~~l~~~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 173 (176)
T 1hng_A 133 KEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVN 173 (176)
T ss_dssp TEEEEEESS-----------SEEEEECSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred CEECCCCCc-----------EEEEEEEccCCeEEEEEEEecCCCceeccccc
Confidence 988764332 44557889999999999999999988877654
No 105
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.92 E-value=3.8e-24 Score=168.05 Aligned_cols=169 Identities=15% Similarity=0.174 Sum_probs=119.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC-EEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN-RELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g-~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.|.|.|.|.|+|+. .++. . ..........|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..++
T Consensus 16 G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p 92 (202)
T 1vca_A 16 GDSVSLTCSTTGCESPFFSWRTQIDSPLN--G-KVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFP 92 (202)
T ss_dssp TSCEEEEEEEESCSSCEEEEEETTCCCCS--S-EEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCC
T ss_pred CCcEEEEEeecCCCCCeEEEECCCCCCcc--c-eEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCC
Confidence 789999999999999999999942 3221 1 12233344579999999999999999999998888888888886431
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
..
T Consensus 93 ~~------------------------------------------------------------------------------ 94 (202)
T 1vca_A 93 KD------------------------------------------------------------------------------ 94 (202)
T ss_dssp SC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 10
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCC---CeEEEEECCEEccCCCce
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE---PRVSWTKNGQPLNSSNIL 236 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~---p~i~W~~~g~~~~~~~~~ 236 (356)
+.+. +. ..+.+|+.++|.|.+.|.++ +.|.|+++|..+......
T Consensus 95 ------------------------------~~~~--~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~ 141 (202)
T 1vca_A 95 ------------------------------PEIH--LS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFL 141 (202)
T ss_dssp ------------------------------CEEE--ES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECC
T ss_pred ------------------------------CEeC--Cc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccc
Confidence 1111 11 35788999999999987543 369999999887532110
Q ss_pred eEE----EeCCEEEEEEccCCCCCCeEEEEEEEcCCCce-------EEEEEEecCCCC
Q psy12422 237 DLK----YKNGVASLQIQEVFPEDEGVYVCTATNSLGTA-------ETKCKLTPLNSS 283 (356)
Q Consensus 237 ~~~----~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-------~~~~~l~p~~~~ 283 (356)
... .......|.|.....+|.|.|+|+|.|..+.. ..+..|.+..+|
T Consensus 142 ~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P 199 (202)
T 1vca_A 142 EDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP 199 (202)
T ss_dssp SCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC
T ss_pred cccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCC
Confidence 000 01113467889888899999999999998762 445666554444
No 106
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.92 E-value=1.1e-24 Score=169.02 Aligned_cols=65 Identities=22% Similarity=0.267 Sum_probs=49.4
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEE--cc-------------cCCeeEEe---cCCeEEEEEeeCCCCCCeEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRE--LS-------------KRDYSMSY---SDGVVSMEIIDCKPEDSGEYKCVATN 62 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~--l~-------------~~~~~~~~---~~~~~~L~i~~~~~~D~G~Y~C~a~n 62 (356)
|+++.|.|.+.+.|.+.+.|+|++.. +. ..+..... .++..+|.|.+++.+|+|.|+|.+.|
T Consensus 10 G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 89 (184)
T 2ny1_B 10 GDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVED 89 (184)
T ss_dssp TSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEEETT
T ss_pred CCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEEEEc
Confidence 78999999999999999999999863 21 01111111 34456799999999999999999987
Q ss_pred CCc
Q psy12422 63 KHG 65 (356)
Q Consensus 63 ~~g 65 (356)
..+
T Consensus 90 ~~~ 92 (184)
T 2ny1_B 90 QKE 92 (184)
T ss_dssp EEE
T ss_pred CCC
Confidence 643
No 107
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.92 E-value=2.6e-24 Score=175.27 Aligned_cols=168 Identities=15% Similarity=0.235 Sum_probs=118.0
Q ss_pred CCceEEEEEecc---CCCCeeEEeeCCEEcc-----------------------------c-CCeeEEecCCeEEEEEee
Q psy12422 1 MQNVIKVKVGST---KPPPTVKWYKGNRELS-----------------------------K-RDYSMSYSDGVVSMEIID 47 (356)
Q Consensus 1 g~~v~l~C~~~g---~p~~~v~W~k~g~~l~-----------------------------~-~~~~~~~~~~~~~L~i~~ 47 (356)
|++++|.|.+.+ .|.+.|+|+|++.... . ..+.....++..+|+|.+
T Consensus 17 G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~ 96 (250)
T 2fbo_J 17 GGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTLRLTH 96 (250)
T ss_dssp TSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSCCEEECS
T ss_pred CCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcceEEEee
Confidence 789999999987 8889999999875431 0 001111122345899999
Q ss_pred CCCCCCeEEEEEEEeCCcee-----EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCc
Q psy12422 48 CKPEDSGEYKCVATNKHGTD-----ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYS 122 (356)
Q Consensus 48 ~~~~D~G~Y~C~a~n~~g~~-----~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~ 122 (356)
++.+|+|.|+|.+.|..+.. ...+.|.|...+
T Consensus 97 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~------------------------------------------- 133 (250)
T 2fbo_J 97 VHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT------------------------------------------- 133 (250)
T ss_dssp CCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS-------------------------------------------
T ss_pred CChhhCeEEEEEeccCccCCcccccceeEEEEEeccC-------------------------------------------
Confidence 99999999999999976642 456667665321
Q ss_pred cccCCCCceEEEEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeec-ccCCceee
Q psy12422 123 SHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFA-NKLTDKTI 201 (356)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v 201 (356)
.+|.+. ..+....+
T Consensus 134 -----------------------------------------------------------------~~~~~~~~~~~~~~v 148 (250)
T 2fbo_J 134 -----------------------------------------------------------------PSNNVHVSTAEVVQV 148 (250)
T ss_dssp -----------------------------------------------------------------CCSCCEECCCSEEEC
T ss_pred -----------------------------------------------------------------CCCeEEEecCceEEe
Confidence 011111 12244667
Q ss_pred cCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCce----------------------eEEEeCCEEEEEEccCCCCCCeE
Q psy12422 202 DDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNIL----------------------DLKYKNGVASLQIQEVFPEDEGV 259 (356)
Q Consensus 202 ~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~----------------------~~~~~~~~~~L~i~~v~~~d~G~ 259 (356)
.+|+.+.|.|.+.|.|.|.+.|++++..+...... ..... ....|.|.+++.+|+|.
T Consensus 149 ~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~ 227 (250)
T 2fbo_J 149 DEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS-GARNLVIRAAKITDAGR 227 (250)
T ss_dssp CTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE-TTTEEEECSCCGGGCEE
T ss_pred cCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccC-CccEEEEecCCcccCEE
Confidence 88999999999999999999999998877542211 11111 11489999999999999
Q ss_pred EEEEEEcCCC---ceEEEEEE
Q psy12422 260 YVCTATNSLG---TAETKCKL 277 (356)
Q Consensus 260 Y~C~a~n~~g---~~~~~~~l 277 (356)
|+|.|.|..| ....++.|
T Consensus 228 Y~C~a~N~~g~~g~~~~~~~l 248 (250)
T 2fbo_J 228 VWCELATGQGELDADRSSTIL 248 (250)
T ss_dssp EEEEEESSSSGGGEEEEEEEE
T ss_pred EEEEecCCccccCccceeEEE
Confidence 9999999554 55555554
No 108
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.92 E-value=3.6e-25 Score=171.70 Aligned_cols=163 Identities=17% Similarity=0.227 Sum_probs=108.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEee-CCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIID-CKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~-~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.+ |+ .|+|+|||..+... .++ +|.|.+ ++.+|+|.|+|.|.|..|.....+.+.|....
T Consensus 14 G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~------~~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~ 83 (186)
T 1jbj_A 14 GTSVELTCPLDS-DE-NLKWEKNGQELPQK------HDK--HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSAD 83 (186)
T ss_dssp TTEEEEECSSCC-CT-TCEEEETTEEECSC------CCS--EEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCC
T ss_pred CcEEEEEEeCCC-CC-ceEEEECCEECCCC------CCC--EEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEeccc
Confidence 789999999987 44 49999999998753 122 799999 99999999999999998875555555443221
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
...... ... ....
T Consensus 84 ~~~~~~-----------------------~~~---~~~~----------------------------------------- 96 (186)
T 1jbj_A 84 DAKKDA-----------------------AKK---DDAK----------------------------------------- 96 (186)
T ss_dssp CCCCCC-----------------------CCC---CCCS-----------------------------------------
T ss_pred cccccc-----------------------ccc---cccc-----------------------------------------
Confidence 100000 000 0000
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecc--cCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFAN--KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD 237 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~ 237 (356)
...++. ..+..... ......+.+|+++.|.|.+ |.|.|.|+|||..+.....
T Consensus 97 -------------------~~~~~~--~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~-- 150 (186)
T 1jbj_A 97 -------------------KDDAKK--DGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA-- 150 (186)
T ss_dssp -------------------CCSSST--TCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC--
T ss_pred -------------------cCCccc--cccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC--
Confidence 000000 00000000 0011235689999999998 8899999999999874332
Q ss_pred EEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 238 LKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 238 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
....|.|.+++.+|+|.|+|.|.|..|..
T Consensus 151 -----~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 -----TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp -----CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred -----CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 22379999999999999999999999876
No 109
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.91 E-value=5e-24 Score=165.67 Aligned_cols=153 Identities=12% Similarity=0.111 Sum_probs=110.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCcee--EEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD--ETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~--~~~~~l~v~~~ 78 (356)
|++|+|.|.+.+. ++.+.|||+|..+...............|.|.+++.+|+|.|+|.+.|..+.. +..+.|.|.+.
T Consensus 18 G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~ 96 (188)
T 1oll_A 18 EKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEM 96 (188)
T ss_dssp TCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESC
T ss_pred CCCEEEEEecCCC-CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEeccc
Confidence 7899999999754 57899999998875211011122344589999999999999999998875432 23345555321
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
T Consensus 97 -------------------------------------------------------------------------------- 96 (188)
T 1oll_A 97 -------------------------------------------------------------------------------- 96 (188)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeE
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~ 238 (356)
..+|.+...+ ...+.+|++++|.|.+.+ +++.+.|+|+|..+.. ..
T Consensus 97 ----------------------------~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~----~~ 142 (188)
T 1oll_A 97 ----------------------------YDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV----QR 142 (188)
T ss_dssp ----------------------------SCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE----EE
T ss_pred ----------------------------CCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccccc----cc
Confidence 1234444333 346889999999999876 4578999999876543 11
Q ss_pred EEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 239 KYKNGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
........|.|.+++.+|+|.|+|.|.|..
T Consensus 143 ~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 143 GYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred cCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 233456789999999999999999999865
No 110
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.91 E-value=1.7e-24 Score=184.97 Aligned_cols=166 Identities=17% Similarity=0.213 Sum_probs=128.4
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCe-EEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSG-EYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.|.|.|.+.|++++..+..... ........+|.|.+++.+|+| .|+|.|.|..|.....+.|.|..+
T Consensus 173 G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~- 250 (347)
T 2ifg_A 173 GDDVLLRCQVEGRGLEQAGWILTELEQSATVM-KSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFP- 250 (347)
T ss_dssp TCCEEEEEEEECSSCCCCCEEESCCCSSEEEC-CCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEE-
T ss_pred CCcEEEEEEEecCCCCEEEEEcCCceeecccc-cceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCC-
Confidence 78999999999999999999999876542210 112334458999999999999 999999999888766666555322
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
T Consensus 251 -------------------------------------------------------------------------------- 250 (347)
T 2ifg_A 251 -------------------------------------------------------------------------------- 250 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEE
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLK 239 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~ 239 (356)
|.+ ....+.+|+.+.|.|.+.|+|.|.|.|+++|..+.........
T Consensus 251 ------------------------------P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~ 296 (347)
T 2ifg_A 251 ------------------------------ASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTE 296 (347)
T ss_dssp ------------------------------EEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEE
T ss_pred ------------------------------Cee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeE
Confidence 111 0012346889999999999999999999999999865544333
Q ss_pred EeC-------CEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCC
Q psy12422 240 YKN-------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNS 282 (356)
Q Consensus 240 ~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~ 282 (356)
... ..++|.|.+++.+|+|.|+|.|.|..|....++.+.+..+
T Consensus 297 ~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 346 (347)
T 2ifg_A 297 FLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDN 346 (347)
T ss_dssp ECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCC
T ss_pred EEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCC
Confidence 222 2568999999999999999999999999999998875543
No 111
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.91 E-value=1.7e-24 Score=182.68 Aligned_cols=218 Identities=17% Similarity=0.205 Sum_probs=146.8
Q ss_pred cccccCccceeeeccc---CCceeeecccccccCCccccCCC-CceEEE----EeeccccccccccccCCCccceeeeee
Q psy12422 90 NFLYSGDRKYIEKHIR---PAPAIITTRQEIKSSYSSHTDDT-GRTTTQ----MSTLSSNYSSSTNNATSPSKKITRRMN 161 (356)
Q Consensus 90 ~~~~~g~~~~l~c~~~---p~p~i~w~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (356)
..+.+|+.+.|.|.+. |.+.+.|++++..+......... ...... ...+.|.|.|...+...
T Consensus 16 ~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g---------- 85 (317)
T 2y25_A 16 WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRG---------- 85 (317)
T ss_dssp EEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSC----------
T ss_pred EEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCC----------
Confidence 5578999999999976 55789999987665432211111 100111 22333445544422211
Q ss_pred ccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC----------CCCCeEEEEECCEEcc
Q psy12422 162 SILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG----------DPEPRVSWTKNGQPLN 231 (356)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g----------~p~p~i~W~~~g~~~~ 231 (356)
.......+.+ ..+|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+.
T Consensus 86 ----------~~~~~~~l~v-----~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~ 150 (317)
T 2y25_A 86 ----------KDKSRLKLVD-----EAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIR 150 (317)
T ss_dssp ----------EEEEEECCST-----HHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCC
T ss_pred ----------cEEEEEEEEE-----ecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECC
Confidence 1111122222 22233333334455667888888887776 7899999999999998
Q ss_pred CCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC--------------------CC-------Cc
Q psy12422 232 SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL--------------------NS-------SN 284 (356)
Q Consensus 232 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~--------------------~~-------~~ 284 (356)
...++.....++...|.|.+++.+|+|.|+|.|.|..|....++.+... .. +.
T Consensus 151 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 230 (317)
T 2y25_A 151 YSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPD 230 (317)
T ss_dssp CCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCS
T ss_pred CCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCc
Confidence 8777777777777889999999999999999999999988877776411 00 00
Q ss_pred -cc-------------------eeEEeC------------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy12422 285 -IL-------------------DLKYKN------------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 326 (356)
Q Consensus 285 -~~-------------------~~~~~~------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 326 (356)
+. .+.|.. ....|.|.+++.+|+|.|+|.|.|..|..+..+.
T Consensus 231 ~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 310 (317)
T 2y25_A 231 VVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFT 310 (317)
T ss_dssp EEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEE
T ss_pred cEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEE
Confidence 00 344432 2248999999999999999999999999999999
Q ss_pred EEEEec
Q psy12422 327 LTVRST 332 (356)
Q Consensus 327 l~V~~~ 332 (356)
|.|..|
T Consensus 311 l~V~~P 316 (317)
T 2y25_A 311 VSVFIP 316 (317)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999865
No 112
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.91 E-value=5.1e-24 Score=165.01 Aligned_cols=145 Identities=17% Similarity=0.151 Sum_probs=107.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCcee--EEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD--ETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~--~~~~~l~v~~~ 78 (356)
|++|+|.|.+.+ |.+.+.|||+|... ...++ .|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|.+.
T Consensus 22 G~~v~L~C~~~~-~~~~~~W~k~g~~~-------~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~ 91 (184)
T 2gi7_A 22 EKPVTLRCQGPP-GVDLYRLEKLSSSR-------YQDQA--VLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGV 91 (184)
T ss_dssp TCCEEEEEECST-TCSEEEEEETTTCC-------EESSS--EEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESS
T ss_pred CCcEEEEEeCCC-CCCEEEEEECCccc-------cCccc--EEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCc
Confidence 789999999987 78899999998751 12222 79999999999999999999987642 23455555321
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
T Consensus 92 -------------------------------------------------------------------------------- 91 (184)
T 2gi7_A 92 -------------------------------------------------------------------------------- 91 (184)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeE
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~ 238 (356)
..+|.+...+ ...+.+|+.++|.|.+.+.| +.+.|+|+|..+......
T Consensus 92 ----------------------------~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~-- 139 (184)
T 2gi7_A 92 ----------------------------FAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPE-- 139 (184)
T ss_dssp ----------------------------SCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCC--
T ss_pred ----------------------------CCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecC--
Confidence 1223333333 33577899999999987654 699999999877653211
Q ss_pred EEeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 239 KYKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
......|.|.+++.+|+|.|+|.|.|..+
T Consensus 140 --~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 140 --RWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp --EEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred --CCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 12234799999999999999999999865
No 113
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.91 E-value=7.8e-24 Score=168.14 Aligned_cols=169 Identities=16% Similarity=0.236 Sum_probs=120.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeC--CEEc-------------ccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKG--NREL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~--g~~l-------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+.|.+.+.|||+ +... ...++......+..+|.|.+++.+|+|.|+|.+.|..+
T Consensus 15 G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 94 (213)
T 3mj8_L 15 GQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTN 94 (213)
T ss_dssp TSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTT
T ss_pred CCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEEeccCCc
Confidence 89999999999999999999992 2211 11244444466677999999999999999999999877
Q ss_pred ---eeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccc
Q psy12422 66 ---TDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNY 142 (356)
Q Consensus 66 ---~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (356)
.....+.|.|...+
T Consensus 95 ~~~~~~~~~~l~V~~~~--------------------------------------------------------------- 111 (213)
T 3mj8_L 95 SAWVFGSGTKVTVLGQP--------------------------------------------------------------- 111 (213)
T ss_dssp TEEEEBCCEEEEEECSC---------------------------------------------------------------
T ss_pred ceeEEcCceEEEEeCCC---------------------------------------------------------------
Confidence 33444556554210
Q ss_pred cccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCC-CC-Ce
Q psy12422 143 SSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGD-PE-PR 220 (356)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~-p~ 220 (356)
..+|.+...+....+.+|+.++|.|.+.|. |+ +.
T Consensus 112 --------------------------------------------~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~ 147 (213)
T 3mj8_L 112 --------------------------------------------NAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVA 147 (213)
T ss_dssp --------------------------------------------CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCE
T ss_pred --------------------------------------------CCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeE
Confidence 133444444434445589999999999885 44 38
Q ss_pred EEEEECCEEccCCCceeE-EEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 221 VSWTKNGQPLNSSNILDL-KYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 221 i~W~~~g~~~~~~~~~~~-~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
+.|+++|..+........ ....+ .+.|.|.++..+|+|.|+|.|.|..+....++.
T Consensus 148 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 148 VTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp EEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred EEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 999999998865321100 00222 246999999999999999999999987766654
No 114
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.91 E-value=1.2e-23 Score=165.39 Aligned_cols=147 Identities=18% Similarity=0.241 Sum_probs=108.8
Q ss_pred CCceEEEEEeccCCCCe-eEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPT-VKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~-v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|++++|.|.+.+.|.+. |+|||||..+.... ..|.|.+++.+|+|.|+|.+.|. ..+..+.|.|...
T Consensus 22 G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~---------~~L~i~~v~~~D~G~Y~C~a~n~--~~s~~~~l~V~~~- 89 (204)
T 3sgj_C 22 KDSVTLKCQGAYSPEDQSTQWFHNESLISSQA---------SSYFIDAATVDDSGEYRCQTQLS--TLSDPVQLEVHIG- 89 (204)
T ss_dssp TCCEEEEEECCSSSSCCCEEEEETTEEESCCS---------SEEEESSCCGGGCEEEEEEETTS--BCCCCEEEEEECS-
T ss_pred CCCEEEEEcCCCCCCCcEEEEEECCEEcccCc---------cEEEEecccccCCEEEEEEeCCC--cccccEEEEEecC-
Confidence 78999999999988876 99999999886542 38999999999999999999874 3333455555422
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
T Consensus 90 -------------------------------------------------------------------------------- 89 (204)
T 3sgj_C 90 -------------------------------------------------------------------------------- 89 (204)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCC-CCCeEEEEECCEEccCCCceeE
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGD-PEPRVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~p~i~W~~~g~~~~~~~~~~~ 238 (356)
|.+...+ ...+.+|+.+.|.|.+.+. |.+.+.|+++|..+..
T Consensus 90 ------------------------------p~~~~~~-~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~------ 132 (204)
T 3sgj_C 90 ------------------------------WLLLQAP-RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY------ 132 (204)
T ss_dssp ------------------------------SEEEECS-CSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE------
T ss_pred ------------------------------ceEecCC-ceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec------
Confidence 1111111 1357789999999999655 5688999999988642
Q ss_pred EEeCCEEEEEEccCCCCCCeEEEEEEEcCCC-ceEEEEEEe
Q psy12422 239 KYKNGVASLQIQEVFPEDEGVYVCTATNSLG-TAETKCKLT 278 (356)
Q Consensus 239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~ 278 (356)
.... ..|.|.+++.+|+|.|+|.|.|..+ .....+.|.
T Consensus 133 ~~~~--~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~ 171 (204)
T 3sgj_C 133 FHHN--SDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQIT 171 (204)
T ss_dssp EEEC--CCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred ccCC--ceEEECcCCcccCEEEEEEEEeCCCceecCcEEEE
Confidence 1122 3799999999999999999999543 333344444
No 115
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.91 E-value=5.7e-23 Score=164.69 Aligned_cols=166 Identities=16% Similarity=0.172 Sum_probs=111.3
Q ss_pred CCceEEEEEeccCCCC---eeEEeeCCE-----------Eccc-------CCeeEE---ecCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKPPP---TVKWYKGNR-----------ELSK-------RDYSMS---YSDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~---~v~W~k~g~-----------~l~~-------~~~~~~---~~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.+.|.+ .|+|+|++. .+.. .+.... ..++..+|+|.+++.+|+|.|
T Consensus 19 G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 98 (226)
T 4f80_A 19 GEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKY 98 (226)
T ss_dssp TSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGGGCEEE
T ss_pred CCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchHHCeeE
Confidence 8999999999876655 689998653 2211 011111 123567999999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEe
Q psy12422 57 KCVATNKHGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMS 136 (356)
Q Consensus 57 ~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~ 136 (356)
+|.|.|..|.....+.+.+....
T Consensus 99 ~C~a~n~~~~~~~~v~~~~~~~~--------------------------------------------------------- 121 (226)
T 4f80_A 99 LCYFQDGDFYEKALVELKVAALG--------------------------------------------------------- 121 (226)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCC---------------------------------------------------------
T ss_pred EEEEECCCcEEEEEEEEeeccce---------------------------------------------------------
Confidence 99999998877665554443210
Q ss_pred eccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-
Q psy12422 137 TLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG- 215 (356)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g- 215 (356)
........+.+|+.+.|.|.+.|
T Consensus 122 --------------------------------------------------------~~~~~~~~~~~g~~v~l~c~~~g~ 145 (226)
T 4f80_A 122 --------------------------------------------------------SDLHVDVKGYKDGGIHLECRSTGW 145 (226)
T ss_dssp --------------------------------------------------------CCCEEEEEEEETTEEEEEEEEEEE
T ss_pred --------------------------------------------------------ecccceeeeccCCceeeEEEeccC
Confidence 00011235667999999999977
Q ss_pred CCCCeEEEEECC-EEccCCCceeEEEeCC-EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEec
Q psy12422 216 DPEPRVSWTKNG-QPLNSSNILDLKYKNG-VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 216 ~p~p~i~W~~~g-~~~~~~~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
+|.|.|+|++++ ..+............+ ...+.+..++.+|+|.|+|.|.|..|..+.++.+..
T Consensus 146 ~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v 211 (226)
T 4f80_A 146 YPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211 (226)
T ss_dssp BSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECC
T ss_pred CCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEE
Confidence 699999999955 4443332222222222 234556678899999999999999999999888873
No 116
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.91 E-value=2.9e-24 Score=170.63 Aligned_cols=169 Identities=16% Similarity=0.184 Sum_probs=117.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--EEc----------c---cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--REL----------S---KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~~l----------~---~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|+++.|.|.+.+.|.+.|+|||++ ..+ . ..++......+..+|+|.+++.+|+|.|+|.+.|..+
T Consensus 16 G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 95 (213)
T 3d9a_L 16 GNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWP 95 (213)
T ss_dssp TCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEeeecCCc
Confidence 789999999999999999999843 221 0 1344444456677999999999999999999999876
Q ss_pred eeEE-EEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccc
Q psy12422 66 TDET-NCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSS 144 (356)
Q Consensus 66 ~~~~-~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (356)
.... ...|.|...
T Consensus 96 ~~~~~~~~l~V~~~------------------------------------------------------------------ 109 (213)
T 3d9a_L 96 YTFGGGTKLEIKRA------------------------------------------------------------------ 109 (213)
T ss_dssp CEECCCEEEEECCC------------------------------------------------------------------
T ss_pred ceeCCCEEEEEecC------------------------------------------------------------------
Confidence 4322 234555321
Q ss_pred cccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-CCCC-eEE
Q psy12422 145 STNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG-DPEP-RVS 222 (356)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p~p-~i~ 222 (356)
..+|.+...+....+.+|+.++|.|.+.| .|++ .+.
T Consensus 110 ------------------------------------------~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~ 147 (213)
T 3d9a_L 110 ------------------------------------------DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVK 147 (213)
T ss_dssp ------------------------------------------CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEE
T ss_pred ------------------------------------------CCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEE
Confidence 12233333222222347889999999987 6665 799
Q ss_pred EEECCEEccCCCceeEE--E-eCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 223 WTKNGQPLNSSNILDLK--Y-KNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 223 W~~~g~~~~~~~~~~~~--~-~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
|+++|..+......... . .++ .+.|.|.+++.+|+|.|+|.|.|..........+
T Consensus 148 W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i 209 (213)
T 3d9a_L 148 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 209 (213)
T ss_dssp EEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEE
T ss_pred EEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEEe
Confidence 99999988755111110 0 111 2489999999999999999999998775444444
No 117
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.90 E-value=1.1e-24 Score=172.40 Aligned_cols=161 Identities=20% Similarity=0.316 Sum_probs=115.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcc-----------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCce--e
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELS-----------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT--D 67 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~-----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~--~ 67 (356)
|+++.|.|.+.+.|.+.+.|+|++..+. .........+ ..|.|.+++.+|+|.|+|.+.|..|. .
T Consensus 19 G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~ 96 (209)
T 1nbq_A 19 NNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP--TGITFKSVTREDTGTYTCMVSEEGGNSYG 96 (209)
T ss_dssp TCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET--TEEECSCCCTTSCSEEEEEEEETTSSCEE
T ss_pred CCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec--cEEEEeeCCHHHCcEEEEEEecCCCCccc
Confidence 7899999999999999999999875521 1111122222 38999999999999999999998653 3
Q ss_pred EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecccccccccc
Q psy12422 68 ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTN 147 (356)
Q Consensus 68 ~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (356)
+..+.|.|..+
T Consensus 97 ~~~~~l~V~~~--------------------------------------------------------------------- 107 (209)
T 1nbq_A 97 EVKVKLIVLVP--------------------------------------------------------------------- 107 (209)
T ss_dssp CCEEECCEEBC---------------------------------------------------------------------
T ss_pred eEEEEEEEecC---------------------------------------------------------------------
Confidence 33444444322
Q ss_pred ccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE-cCCCCCeEEEEEC
Q psy12422 148 NATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV-KGDPEPRVSWTKN 226 (356)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~ 226 (356)
|.+........+.+|+.+.|.|.+ .|+|.|.+.|+++
T Consensus 108 ------------------------------------------p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~ 145 (209)
T 1nbq_A 108 ------------------------------------------PSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKD 145 (209)
T ss_dssp ------------------------------------------CCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEET
T ss_pred ------------------------------------------CcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEEC
Confidence 111111112357889999999997 9999999999999
Q ss_pred CEEccCCCce-------eEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEE
Q psy12422 227 GQPLNSSNIL-------DLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETK 274 (356)
Q Consensus 227 g~~~~~~~~~-------~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 274 (356)
|..+...... .+........|.|.+++.+|+|.|+|.|.|..|....+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s 200 (209)
T 1nbq_A 146 GIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTS 200 (209)
T ss_dssp TCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEEC
T ss_pred CeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccccc
Confidence 9888754321 11112233589999999999999999999999988443
No 118
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.90 E-value=1.2e-22 Score=169.33 Aligned_cols=230 Identities=18% Similarity=0.210 Sum_probs=138.4
Q ss_pred cccccccCccceeeecccC-CceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeeeeeccccC
Q psy12422 88 AHNFLYSGDRKYIEKHIRP-APAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRRMNSILDT 166 (356)
Q Consensus 88 ~~~~~~~g~~~~l~c~~~p-~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (356)
....+.+|+.+.|.|.+.. ++.+.|++.+....... .+.... .. +....+........+.+.|.|......
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~p~~v~W~~~~g~~~~~~-----~~~~~~--~~-~~~~~L~i~~~~~~D~G~Y~C~~~n~~ 83 (291)
T 2wim_A 12 SKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIIST-----QRVVVQ--KE-GVRSRLTIYNANIEDAGIYRCQATDAK 83 (291)
T ss_dssp SEEEEETTCCEEEEEEEESCCSEEECBCTTCCBCCCB-----TTEEEE--EE-TTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred cceEecCCCcEEEEEEEeCCCCceEEECCCCcCccCC-----CcEEEe--cC-CCEEEEEEccCCcccCEEEEEEEeccc
Confidence 3446789999999999983 34799998443322111 010000 00 000111112223333344444332221
Q ss_pred CCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEE
Q psy12422 167 DSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVAS 246 (356)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~ 246 (356)
+ ........+.+ ..+|.+...+....+.+|+.+.|.|.+.++|.|.+.|++++..+.......+.... ...
T Consensus 84 g---~~~~~~~~l~v-----~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~ 154 (291)
T 2wim_A 84 G---QTQEATVVLEI-----YQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA-NNN 154 (291)
T ss_dssp S---CEEEEEEEEEE-----ECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECT-TSC
T ss_pred C---ceEEEEEEEEe-----cCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEcc-CCC
Confidence 1 11122333444 44566666667778999999999999999999999999999887643222222221 237
Q ss_pred EEEccCCCCCCeEEEEEEEcCCCceE--EEEEEecCCCCcc---------c-------------------eeEEeC----
Q psy12422 247 LQIQEVFPEDEGVYVCTATNSLGTAE--TKCKLTPLNSSNI---------L-------------------DLKYKN---- 292 (356)
Q Consensus 247 L~i~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~p~~~~~~---------~-------------------~~~~~~---- 292 (356)
|.|.+++.+|+|.|+|.|.|..+... ..+.+....++.+ . .+.|..
T Consensus 155 L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~ 234 (291)
T 2wim_A 155 LQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKL 234 (291)
T ss_dssp EEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEE
T ss_pred EEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEE
Confidence 99999999999999999999986543 2233331111110 0 344433
Q ss_pred -----------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCC
Q psy12422 293 -----------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPA 334 (356)
Q Consensus 293 -----------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 334 (356)
....|.|.+++.+|+|.|+|.|.|..|..++.+.|.|..++.
T Consensus 235 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 235 IEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp CCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-----
T ss_pred CcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEecc
Confidence 246799999999999999999999999999999999988764
No 119
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.90 E-value=4.1e-23 Score=158.58 Aligned_cols=139 Identities=17% Similarity=0.244 Sum_probs=105.8
Q ss_pred CCceEEEEEeccCCCCe-eEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPT-VKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~-v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|++++|.|.+.+.|.+. ++|||+|..+... ...|.|.+++.+|+|.|+|.+.|..+ +..+.|.|...
T Consensus 22 G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~---------~~~L~i~~~~~~d~G~Y~C~~~n~~~--s~~~~l~V~~~- 89 (175)
T 1fnl_A 22 KDSVTLKCQGAYSPEDNSTQWFHNESLISSQ---------ASSYFIDAATVNDSGEYRCQTNLSTL--SDPVQLEVHIG- 89 (175)
T ss_dssp TCCEEEEEECCCBTTBCCCEEEETTEEEESS---------CSEEEESSCCGGGCEEEEEECSSSCC--CCCEEEEEECS-
T ss_pred CCcEEEEeeCCCCCCCcceEEEECCEEccCC---------ceEEEEeCCCcccCEEEEEEeeCCcc--cccEEEEEeCC-
Confidence 78999999999988776 8999999987532 22899999999999999999988544 33445555411
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
T Consensus 90 -------------------------------------------------------------------------------- 89 (175)
T 1fnl_A 90 -------------------------------------------------------------------------------- 89 (175)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCC-eEEEEECCEEccCCCceeE
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEP-RVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~i~W~~~g~~~~~~~~~~~ 238 (356)
+.+.. .....+.+|+.+.|.|.+.+.|++ .+.|+++|..+..
T Consensus 90 ------------------------------~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~------ 132 (175)
T 1fnl_A 90 ------------------------------WLLLQ-APRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY------ 132 (175)
T ss_dssp ------------------------------SEEEE-CSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE------
T ss_pred ------------------------------Cceee-CCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC------
Confidence 00000 112357789999999999887765 8999999988742
Q ss_pred EEeCCEEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 239 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
.... ..|.|.+++.+|+|.|+|.|.|..+.
T Consensus 133 ~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~~ 162 (175)
T 1fnl_A 133 FHHN--SDFHIPKATLKDSGSYFCRGLVGSKN 162 (175)
T ss_dssp EEEC--CCEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCCC--CEEEEcccChhhCeEEEEEEEcCCCC
Confidence 1122 37999999999999999999997664
No 120
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.90 E-value=9.1e-24 Score=187.38 Aligned_cols=248 Identities=14% Similarity=0.156 Sum_probs=143.6
Q ss_pred CCceEEEEEeccC-CC-CeeEEeeCCEEcccCCe-eEEecCCe----EEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEE
Q psy12422 1 MQNVIKVKVGSTK-PP-PTVKWYKGNRELSKRDY-SMSYSDGV----VSMEIIDCKPEDSGEYKCVATNKHGTDETNCVV 73 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~-~~v~W~k~g~~l~~~~~-~~~~~~~~----~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 73 (356)
|+++.|.|.+.|. |. +.|+|+|+|..+..... .....++. ..|.|.+++.+| |.|+|.|.|..+.......+
T Consensus 147 g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v 225 (457)
T 1hzh_H 147 GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKA 225 (457)
T ss_dssp TCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEEC
T ss_pred CCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEe
Confidence 6899999999876 65 79999999976532111 11223332 379999999999 99999999987776555444
Q ss_pred EEeccc------------c--chhh-hhhcc--cccccCccceeeeccc--CC-c---eeeecccccccCCccc----cC
Q psy12422 74 IVESEE------------E--SKEQ-QELAH--NFLYSGDRKYIEKHIR--PA-P---AIITTRQEIKSSYSSH----TD 126 (356)
Q Consensus 74 ~v~~~~------------~--~~~~-~~~~~--~~~~~g~~~~l~c~~~--p~-p---~i~w~~~~~~~~~~~~----~~ 126 (356)
.+...+ . .+.. ...+. ..+.+|+.+.|.|.+. |+ | .+.|++++..+..... ..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~ 305 (457)
T 1hzh_H 226 EPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQ 305 (457)
T ss_dssp CCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEEC
T ss_pred cccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceec
Confidence 433211 0 0110 00111 1257899999999987 22 2 7999998866532110 01
Q ss_pred CCCceEEE--E---eec---cccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccC-C
Q psy12422 127 DTGRTTTQ--M---STL---SSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL-T 197 (356)
Q Consensus 127 ~~~~~~~~--~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~ 197 (356)
..+..... . ..+ .+.|.|.+.+.... ......+.+.. ....+|.+...+ .
T Consensus 306 ~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~--------------------~~~~~~v~~~~-~~~~~P~v~~~~~~ 364 (457)
T 1hzh_H 306 YNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALP--------------------APIEKTISKAK-GQPREPQVYTLPPS 364 (457)
T ss_dssp TTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSS--------------------SCEEEEECCCC-CCCBCCEEEEECCC
T ss_pred CCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCC--------------------CcceEEEEccc-CCCCCCeEEEECCC
Confidence 11111110 0 112 45555554321110 01111222110 114556665443 3
Q ss_pred ceeecCCCeEEEEEEEcCCCCC--eEEEEECCEEccCCCceeEEEe-CC----EEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 198 DKTIDDGQCLDLSAVVKGDPEP--RVSWTKNGQPLNSSNILDLKYK-NG----VASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 198 ~~~v~~g~~~~l~C~~~g~p~p--~i~W~~~g~~~~~~~~~~~~~~-~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
...+..|+ +.|.|.+.|.|++ .|.|++||..+........... ++ ...|.|.....+|+|.|+|.|.|....
T Consensus 365 ~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 365 RDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 443 (457)
T ss_dssp GGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred ccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCC
Confidence 33345555 9999999986554 8999999998864322111111 11 135667777668899999999998764
Q ss_pred e
Q psy12422 271 A 271 (356)
Q Consensus 271 ~ 271 (356)
.
T Consensus 444 ~ 444 (457)
T 1hzh_H 444 N 444 (457)
T ss_dssp G
T ss_pred C
Confidence 3
No 121
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.90 E-value=1.4e-23 Score=166.34 Aligned_cols=166 Identities=13% Similarity=0.163 Sum_probs=113.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeC--CEEc-----------c--cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKG--NREL-----------S--KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~--g~~l-----------~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+.|.+.|.|||+ |..+ . ..++.....++..+|.|.+++.+|+|.|.|.+.|..+
T Consensus 15 G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 94 (210)
T 1lk3_L 15 GEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGP 94 (210)
T ss_dssp TSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEEEEcCCC
Confidence 78999999999999899999994 3222 0 1344444455667999999999999999999998765
Q ss_pred eeE-EEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccc
Q psy12422 66 TDE-TNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSS 144 (356)
Q Consensus 66 ~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (356)
... ....|.|...
T Consensus 95 ~~~~~~~~l~V~~~------------------------------------------------------------------ 108 (210)
T 1lk3_L 95 LTFGAGTKLELKRA------------------------------------------------------------------ 108 (210)
T ss_dssp CEECCCEEEEECCC------------------------------------------------------------------
T ss_pred ceeCCCEEEEEcCC------------------------------------------------------------------
Confidence 432 2234444321
Q ss_pred cccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-CCCC-eEE
Q psy12422 145 STNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG-DPEP-RVS 222 (356)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p~p-~i~ 222 (356)
..+|.+...+....+.+|+.++|.|.+.| .|++ .|.
T Consensus 109 ------------------------------------------~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~ 146 (210)
T 1lk3_L 109 ------------------------------------------DAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVK 146 (210)
T ss_dssp ------------------------------------------CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEE
T ss_pred ------------------------------------------CcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEE
Confidence 12233333222222447999999999987 4554 799
Q ss_pred EEECCEEccCC-Cce-eEEE-eCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEE
Q psy12422 223 WTKNGQPLNSS-NIL-DLKY-KNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETK 274 (356)
Q Consensus 223 W~~~g~~~~~~-~~~-~~~~-~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 274 (356)
|+++|..+... ... .... .++ .+.|.|.++..+|+|.|+|.|.|........
T Consensus 147 W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 205 (210)
T 1lk3_L 147 WKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVV 205 (210)
T ss_dssp EEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCEE
T ss_pred EEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCeee
Confidence 99999988654 110 0001 111 2479999999999999999999988754433
No 122
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.90 E-value=1.1e-22 Score=171.29 Aligned_cols=143 Identities=17% Similarity=0.268 Sum_probs=108.9
Q ss_pred CCeecccC-CceeecCCCeEEEEEEEc-CCCCCeEEEEECCEEccCCCceeEEEe--CCEEEEEEccCCCCCCeEEEEEE
Q psy12422 189 PPQFANKL-TDKTIDDGQCLDLSAVVK-GDPEPRVSWTKNGQPLNSSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 189 ~p~~~~~~-~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~~g~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
+|.+...+ ....+.+|+.+.|.|.+. +.|.+.+.|+++|..+....++.+... .+...|.|.+++.+|+|.|+|.|
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 185 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQL 185 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEE
Confidence 34443333 377899999999999998 899999999999999988776665554 55677999999999999999999
Q ss_pred EcCCCceEEEEEEe-----------------------cC----------------------CCCccceeEEeC-------
Q psy12422 265 TNSLGTAETKCKLT-----------------------PL----------------------NSSNILDLKYKN------- 292 (356)
Q Consensus 265 ~n~~g~~~~~~~l~-----------------------p~----------------------~~~~~~~~~~~~------- 292 (356)
.|..+.......+. |. ..+....+.|..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~ 265 (312)
T 2y23_A 186 QDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISV 265 (312)
T ss_dssp ESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEE
T ss_pred EeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCC
Confidence 88766554444431 10 000001334422
Q ss_pred --------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 293 --------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 293 --------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
+...|.|.+++.+|+|.|+|.|.|..|..++.+.|.|++
T Consensus 266 ~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~~ 312 (312)
T 2y23_A 266 DEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEA 312 (312)
T ss_dssp ECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSCC
T ss_pred CCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEecC
Confidence 346899999999999999999999999999999998753
No 123
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.90 E-value=8.6e-23 Score=160.46 Aligned_cols=155 Identities=12% Similarity=0.092 Sum_probs=107.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCee--EEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc-----eeEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYS--MSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG-----TDETNCVV 73 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~--~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g-----~~~~~~~l 73 (356)
|++|+|.|.+. .|.+.+.|||+|..+...... .........|.|.+++.+|+|.|+|.+.|... ..+..+.|
T Consensus 22 G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l 100 (201)
T 1nkr_A 22 EETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI 100 (201)
T ss_dssp TCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEE
T ss_pred CCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEE
Confidence 78999999997 478899999999876432111 11122345899999999999999999987531 22334455
Q ss_pred EEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCc
Q psy12422 74 IVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPS 153 (356)
Q Consensus 74 ~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (356)
.|.+.
T Consensus 101 ~V~~~--------------------------------------------------------------------------- 105 (201)
T 1nkr_A 101 VIIGL--------------------------------------------------------------------------- 105 (201)
T ss_dssp EEECS---------------------------------------------------------------------------
T ss_pred Eeecc---------------------------------------------------------------------------
Confidence 55421
Q ss_pred cceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC
Q psy12422 154 KKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS 233 (356)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~ 233 (356)
..+|.+...+. ..+.+|++++|.|.+.+ |.+.+.|+|+|..+...
T Consensus 106 ---------------------------------~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~ 150 (201)
T 1nkr_A 106 ---------------------------------YEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERR 150 (201)
T ss_dssp ---------------------------------SCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEE
T ss_pred ---------------------------------CCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcc
Confidence 22344444343 36889999999999986 56889999999876532
Q ss_pred CceeEEEeC-CEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 234 NILDLKYKN-GVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 234 ~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
........+ ....|.|.+++ |+|.|+|.|.+..
T Consensus 151 ~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 151 LPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred cccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 211111111 14689999998 9999999998764
No 124
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.90 E-value=7.6e-23 Score=162.39 Aligned_cols=157 Identities=16% Similarity=0.185 Sum_probs=112.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--EEcc-------------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--RELS-------------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~~l~-------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+.|.+.|.|||++ ..+. ..++.....++..+|+|.+++.+|+|.|+|.|.|..+
T Consensus 16 G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 95 (213)
T 3nl4_L 16 GGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYCQSTYENP 95 (213)
T ss_dssp TCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEECCSST
T ss_pred CCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEEecCCCCc
Confidence 789999999999999999999942 2110 2345455556777999999999999999999998766
Q ss_pred e---eEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccc
Q psy12422 66 T---DETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNY 142 (356)
Q Consensus 66 ~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (356)
. ......|.|...
T Consensus 96 ~~~~~~~~~~l~V~~~---------------------------------------------------------------- 111 (213)
T 3nl4_L 96 TYVSFGGGTEVGVKGD---------------------------------------------------------------- 111 (213)
T ss_dssp TTCEECCCEEEEEECC----------------------------------------------------------------
T ss_pred eeEEeCCCeEEEEeCC----------------------------------------------------------------
Confidence 2 233344555321
Q ss_pred cccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-CCCCeE
Q psy12422 143 SSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG-DPEPRV 221 (356)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p~p~i 221 (356)
..+|.+...+....+.+|+.++|.|.+.| +|.|.|
T Consensus 112 --------------------------------------------~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v 147 (213)
T 3nl4_L 112 --------------------------------------------PVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTV 147 (213)
T ss_dssp --------------------------------------------CBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEE
T ss_pred --------------------------------------------CcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEE
Confidence 22344433333334667999999999988 899999
Q ss_pred EEEECCEEccCCCceeEE---EeCC----EEEEEEccCCCCCCeEEEEEEE
Q psy12422 222 SWTKNGQPLNSSNILDLK---YKNG----VASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 222 ~W~~~g~~~~~~~~~~~~---~~~~----~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
.|+++|..+......... ...+ .+.|.|.++..+|+|.|+|.|.
T Consensus 148 ~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 148 TWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred EEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 999999988643200000 0011 2479999999999999999999
No 125
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.90 E-value=4.1e-23 Score=158.79 Aligned_cols=150 Identities=23% Similarity=0.262 Sum_probs=108.3
Q ss_pred CCceEEEEEeccCCCC-eeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPP-TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~-~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|++++|.|.+.+.|.+ .++|||+|..+... ...|.|.+++.+|+|.|+|.+.|..+. ..+.|.|...
T Consensus 19 G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~~~~~~~s--~~~~l~V~~~- 86 (176)
T 1f2q_A 19 GENVTLTCNGNNFFEVSSTKWFHNGSLSEET---------NSSLNIVNAKFEDSGEYKCQHQQVNES--EPVYLEVFSD- 86 (176)
T ss_dssp TCCEEEECCTTCC----CCEEEETTEECSCC---------SSEEEECSCCGGGCEEEEEECTTSSCC--CCEEEEEECS-
T ss_pred CCcEEEEEeCCCCCCcceEEEEECCeECCCC---------ceEEEEeccceecCEEEEEEcCCcccc--ccEEEEEeCc-
Confidence 7899999999988875 69999999988642 238999999999999999999886543 3344444311
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
T Consensus 87 -------------------------------------------------------------------------------- 86 (176)
T 1f2q_A 87 -------------------------------------------------------------------------------- 86 (176)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE-cCCCCCeEEEEECCEEccCCCceeE
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV-KGDPEPRVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~~~~~~~~~~ 238 (356)
+.+.. .....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+....
T Consensus 87 ------------------------------~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~---- 131 (176)
T 1f2q_A 87 ------------------------------WLLLQ-ASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY---- 131 (176)
T ss_dssp ------------------------------SEEEE-ESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC----
T ss_pred ------------------------------ceeec-CCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec----
Confidence 00000 112357799999999999 567778999999999885321
Q ss_pred EEeCCEEEEEEccCCCCCCeEEEEEEEcCCCce-EEEEEEecCC
Q psy12422 239 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGTA-ETKCKLTPLN 281 (356)
Q Consensus 239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~p~~ 281 (356)
....|.|.+++.+|+|.|+|.|.|..+.. ...+.|.+..
T Consensus 132 ----~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 171 (176)
T 1f2q_A 132 ----ENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIK 171 (176)
T ss_dssp ----CSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ----CCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEec
Confidence 12389999999999999999999975432 3334554333
No 126
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.89 E-value=6.3e-23 Score=163.24 Aligned_cols=80 Identities=14% Similarity=0.199 Sum_probs=61.2
Q ss_pred eeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 199 KTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 199 ~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
..+.+|+.+.|.|.+.|.|+|.|.|++++..+.......... ....+.|.|.+++.+|+|.|+|.|.|..|.....+.+
T Consensus 128 ~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~ 207 (218)
T 4frw_A 128 LEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITH 207 (218)
T ss_dssp EETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEE
T ss_pred eeeeeccccceeeeccCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEE
Confidence 456678899999999999999999999987765433221100 0113579999999999999999999999987666555
Q ss_pred e
Q psy12422 278 T 278 (356)
Q Consensus 278 ~ 278 (356)
.
T Consensus 208 ~ 208 (218)
T 4frw_A 208 I 208 (218)
T ss_dssp E
T ss_pred E
Confidence 4
No 127
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.89 E-value=1.7e-22 Score=165.07 Aligned_cols=75 Identities=17% Similarity=0.196 Sum_probs=58.5
Q ss_pred ccCCceeecCCCeEEEEEEEcCCCCCeEEEEE--CCEEcc------------CCCceeEEEeCCEEEEEEccCCCCCCeE
Q psy12422 194 NKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK--NGQPLN------------SSNILDLKYKNGVASLQIQEVFPEDEGV 259 (356)
Q Consensus 194 ~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~--~g~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 259 (356)
..+....+.+|++++|.|.+.+.|++.+.|+| +|..+. ...++.........+|.|.+++.+|+|.
T Consensus 144 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 223 (257)
T 1f3r_B 144 QSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVAT 223 (257)
T ss_dssp EETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSE
T ss_pred ccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEE
Confidence 33456678899999999999999989999999 554331 1234444444566789999999999999
Q ss_pred EEEEEEcCC
Q psy12422 260 YVCTATNSL 268 (356)
Q Consensus 260 Y~C~a~n~~ 268 (356)
|.|.|.|..
T Consensus 224 Y~C~a~n~~ 232 (257)
T 1f3r_B 224 YFCYQYNNG 232 (257)
T ss_dssp EEEEEESSS
T ss_pred EEEEEeCCC
Confidence 999999975
No 128
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.89 E-value=6.1e-22 Score=158.22 Aligned_cols=168 Identities=16% Similarity=0.173 Sum_probs=115.0
Q ss_pred CCceEEEEEeccCCC-----CeeEEeeCCEEccc----------------CCeeEE---ecCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKPP-----PTVKWYKGNRELSK----------------RDYSMS---YSDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p~-----~~v~W~k~g~~l~~----------------~~~~~~---~~~~~~~L~i~~~~~~D~G~Y 56 (356)
|+++.|.|.+.+.|. +.|.|+|++..+.. .+.... ...+..+|.|.+++.+|+|.|
T Consensus 16 G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 95 (222)
T 3sbw_C 16 GSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVY 95 (222)
T ss_dssp TSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGGCEEE
T ss_pred CCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccccCeEE
Confidence 789999999987774 38999997644311 111111 123557899999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEe
Q psy12422 57 KCVATNKHGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMS 136 (356)
Q Consensus 57 ~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~ 136 (356)
+|.+.| .+.....+.|.|..++.
T Consensus 96 ~C~~~~-~~~~~~~~~l~V~~~~~-------------------------------------------------------- 118 (222)
T 3sbw_C 96 RCMISY-GGADYKRITVKVNAPYN-------------------------------------------------------- 118 (222)
T ss_dssp EEEEES-SSEEEEEEEEEEEBCCC--------------------------------------------------------
T ss_pred EEEEEe-CCCceeEEEEEEECCCC--------------------------------------------------------
Confidence 999999 56666677777753211
Q ss_pred eccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCC
Q psy12422 137 TLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGD 216 (356)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~ 216 (356)
.|.... ...+.+|+.+.|.|.+.|+
T Consensus 119 ----------------------------------------------------~~~~~~---~~~~~~g~~v~L~C~~~g~ 143 (222)
T 3sbw_C 119 ----------------------------------------------------KINQRI---LVVDPVTSEHELTCQAEGY 143 (222)
T ss_dssp ----------------------------------------------------CCEEEE---EEEETTTTEEEEEEEEEEB
T ss_pred ----------------------------------------------------CCCcee---eeeecCCCcEEEEEEecCC
Confidence 011100 1145679999999999999
Q ss_pred CCCeEEEEEC-CEEccCCCceeEEE--eCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 217 PEPRVSWTKN-GQPLNSSNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 217 p~p~i~W~~~-g~~~~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
|.|.+.|+++ |..+.......... ++....+.+..++.+|.|.|+|.|.|..|....++.+...
T Consensus 144 P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 144 PKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIP 210 (222)
T ss_dssp SCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEec
Confidence 9999999998 66554432221111 1112223333556789999999999999999998888744
No 129
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.89 E-value=8.7e-23 Score=172.13 Aligned_cols=216 Identities=15% Similarity=0.174 Sum_probs=138.5
Q ss_pred ccccccCccceeeeccc--C-CceeeecccccccCCcccc-----CCCCceE--EEEeeccccccccccccCCCccceee
Q psy12422 89 HNFLYSGDRKYIEKHIR--P-APAIITTRQEIKSSYSSHT-----DDTGRTT--TQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 89 ~~~~~~g~~~~l~c~~~--p-~p~i~w~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
...+.+|+.+.|.|.+. | .+.+.|++++......... ....... .....+.|.|.|.+.+...
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g------- 86 (315)
T 1itb_B 14 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSY------- 86 (315)
T ss_dssp CCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSC-------
T ss_pred EEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCce-------
Confidence 44578999999999887 3 5689999987543221100 0001000 0123344555555533211
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecccC---CceeecCCCeEEEEEEE------cCCCCCeEEEEECCEE
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL---TDKTIDDGQCLDLSAVV------KGDPEPRVSWTKNGQP 229 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~v~~g~~~~l~C~~------~g~p~p~i~W~~~g~~ 229 (356)
.......+.+ ...+|.+...+ ....+.+|+++.|.|.+ .|+|.|.+.|+++|..
T Consensus 87 -------------~~~~~~~v~v----~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~ 149 (315)
T 1itb_B 87 -------------CLRIKISAKF----VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKP 149 (315)
T ss_dssp -------------CCCEECCCEE----ECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEE
T ss_pred -------------EEEEEEEEEE----eCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEE
Confidence 0111111111 12333332222 34578899999999998 8999999999999999
Q ss_pred ccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEE-cCCCce---EEEEEEec-----CCCCccc--------------
Q psy12422 230 LNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT-NSLGTA---ETKCKLTP-----LNSSNIL-------------- 286 (356)
Q Consensus 230 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~-n~~g~~---~~~~~l~p-----~~~~~~~-------------- 286 (356)
+...... +....+ .|.|.+++.+|+|.|+|.|. |..|.. ...+.+.. ..+|.+.
T Consensus 150 l~~~~~~-~~~~~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~ 226 (315)
T 1itb_B 150 LLLDNIH-FSGVKD--RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQ 226 (315)
T ss_dssp CCCCSSS-EEEETT--EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSC
T ss_pred CCCccce-EeecCc--eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCc
Confidence 8754322 333344 89999999999999999999 788876 33333310 0111110
Q ss_pred -------------eeEEeCC-----------------------------eEEEEEecCCCCC-CeEEEEEEEcCCcceEE
Q psy12422 287 -------------DLKYKNG-----------------------------VASLQIQEVFPED-EGVYVCTATNSLGTAET 323 (356)
Q Consensus 287 -------------~~~~~~~-----------------------------~~~L~i~~v~~~d-~G~Y~C~a~n~~g~~~~ 323 (356)
.+.|..+ .+.|.|.+++.+| +|.|+|.|.|..|..++
T Consensus 227 v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~ 306 (315)
T 1itb_B 227 IQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAA 306 (315)
T ss_dssp EEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEE
T ss_pred EEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeE
Confidence 3444321 2389999999999 99999999999999999
Q ss_pred EEEEEEEe
Q psy12422 324 KCKLTVRS 331 (356)
Q Consensus 324 ~~~l~V~~ 331 (356)
.+.|.|+.
T Consensus 307 ~~~l~v~~ 314 (315)
T 1itb_B 307 YIQLIYPV 314 (315)
T ss_dssp EEEEECCC
T ss_pred EEEEEecC
Confidence 99998865
No 130
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.89 E-value=1.6e-22 Score=159.07 Aligned_cols=165 Identities=16% Similarity=0.240 Sum_probs=114.0
Q ss_pred CCceEEEEEec----cCCCCeeEEeeCCEEcc-------------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeC
Q psy12422 1 MQNVIKVKVGS----TKPPPTVKWYKGNRELS-------------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 63 (356)
Q Consensus 1 g~~v~l~C~~~----g~p~~~v~W~k~g~~l~-------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 63 (356)
|++|.|.|.+. +.|.+.+.|+|++..+. ..+... ...+..+|.|.+++.+|+|.|+|.|.|.
T Consensus 9 G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~-~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 87 (201)
T 1dr9_A 9 KEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIF-DITNNLSIVILALRPSDEGTYECVVLKY 87 (201)
T ss_dssp TSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEE-ESTTTTEEEECSCCGGGCEEEEEEEEEC
T ss_pred CCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEE-ccCCCcEEEEecccchhCeEEEEEEEcC
Confidence 79999999994 45778999999998873 111111 1223458999999999999999999997
Q ss_pred Ccee-----EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeec
Q psy12422 64 HGTD-----ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTL 138 (356)
Q Consensus 64 ~g~~-----~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (356)
.|.. ...+.|.|...+
T Consensus 88 ~g~~~~~~~~~~~~l~V~~~~----------------------------------------------------------- 108 (201)
T 1dr9_A 88 EKDAFKREHLAEVTLSVKADF----------------------------------------------------------- 108 (201)
T ss_dssp CTTSCEEEEEEEEEEEEECCC-----------------------------------------------------------
T ss_pred CCCccccccccEEEEEEcCCC-----------------------------------------------------------
Confidence 6544 244555554320
Q ss_pred cccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE-cCCC
Q psy12422 139 SSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV-KGDP 217 (356)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~p 217 (356)
..|.+... ....|+.+.|.|.+ .|+|
T Consensus 109 -------------------------------------------------~~p~~~~~----~~~~g~~~~l~C~~~~g~P 135 (201)
T 1dr9_A 109 -------------------------------------------------PTPSISDF----EIPTSNIRRIICSTSGGFP 135 (201)
T ss_dssp -------------------------------------------------CCCEEEEE----ECSSTTEEEEEEEEEEESS
T ss_pred -------------------------------------------------CCCceEec----cCCCCCeEEEEEecCCccC
Confidence 11222111 12348889999999 5999
Q ss_pred CCeEEEEECCEEccCCCceeEEEeC-CE-EEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 218 EPRVSWTKNGQPLNSSNILDLKYKN-GV-ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 218 ~p~i~W~~~g~~~~~~~~~~~~~~~-~~-~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
.|.|.|+++|..+............ +. ....+..++.+|.|.|+|.|.|..|...+.+.+.
T Consensus 136 ~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~~ 198 (201)
T 1dr9_A 136 EPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWN 198 (201)
T ss_dssp CEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEEC
T ss_pred CCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEecc
Confidence 9999999999888754332222212 22 2223456667899999999999999988877663
No 131
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.89 E-value=2.3e-23 Score=175.06 Aligned_cols=141 Identities=11% Similarity=0.162 Sum_probs=101.1
Q ss_pred ccCCceeecCCCeEEEEEEE-cCCCCCeEEEEECCEEccCCCceeEE-EeCCEEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 194 NKLTDKTIDDGQCLDLSAVV-KGDPEPRVSWTKNGQPLNSSNILDLK-YKNGVASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 194 ~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
..+.......|+.+.|.|.+ .|+|.|.+.|++++..+......... .....+.|.|..+..+|+|.|+|.|.|..+..
T Consensus 119 ~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~ 198 (308)
T 4fom_A 119 KGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEK 198 (308)
T ss_dssp ECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred cccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCC
Confidence 33445556778999999976 78999999999998877533211000 00112479999999999999999999988765
Q ss_pred EE--EEEEecCCCCccc----------------------------eeEEeC------------CeEEEEEecCCCCCCeE
Q psy12422 272 ET--KCKLTPLNSSNIL----------------------------DLKYKN------------GVASLQIQEVFPEDEGV 309 (356)
Q Consensus 272 ~~--~~~l~p~~~~~~~----------------------------~~~~~~------------~~~~L~i~~v~~~d~G~ 309 (356)
.. ++.|.+..+|.+. .+.|.+ ++..|.|.+++.+|+|.
T Consensus 199 ~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 278 (308)
T 4fom_A 199 DIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGV 278 (308)
T ss_dssp CEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSE
T ss_pred ceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCEE
Confidence 43 3333311111100 345543 34567789999999999
Q ss_pred EEEEEEcCCcceEEEEEEEEEecCC
Q psy12422 310 YVCTATNSLGTAETKCKLTVRSTPA 334 (356)
Q Consensus 310 Y~C~a~n~~g~~~~~~~l~V~~~p~ 334 (356)
|+|.|.|..|..++.+.|.|+++|.
T Consensus 279 Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 279 YICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp EEEEEEETTEEEEEEEECCEECCC-
T ss_pred EEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 9999999999999999999999985
No 132
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.89 E-value=1.2e-22 Score=161.20 Aligned_cols=168 Identities=14% Similarity=0.142 Sum_probs=114.6
Q ss_pred CCceEEEEEeccCC---CCeeEEeeC--CEEc-------------ccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKP---PPTVKWYKG--NREL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATN 62 (356)
Q Consensus 1 g~~v~l~C~~~g~p---~~~v~W~k~--g~~l-------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 62 (356)
|++|+|.|.+.+.| .+.|.|||+ |..+ ...++.....++..+|+|.+++.+|+|.|.|.+.|
T Consensus 15 G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 94 (212)
T 1q0x_L 15 GETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWS 94 (212)
T ss_dssp TCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEEEEEEec
Confidence 78999999998887 478999995 2222 02344444456677999999999999999999999
Q ss_pred CCceeE-EEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecccc
Q psy12422 63 KHGTDE-TNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSN 141 (356)
Q Consensus 63 ~~g~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (356)
..+... ....|.|....
T Consensus 95 ~~~~~~~~~~~l~V~~~~-------------------------------------------------------------- 112 (212)
T 1q0x_L 95 NNKLVFGGGTKLTVLGQP-------------------------------------------------------------- 112 (212)
T ss_dssp SSCEEECCCEEEEECCSC--------------------------------------------------------------
T ss_pred CchhhcCCCeEEEEecCC--------------------------------------------------------------
Confidence 765321 22334442110
Q ss_pred ccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCC--
Q psy12422 142 YSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEP-- 219 (356)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-- 219 (356)
..+|.+...+....+.+|+.++|.|.+.|.+++
T Consensus 113 ---------------------------------------------~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~ 147 (212)
T 1q0x_L 113 ---------------------------------------------KSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVV 147 (212)
T ss_dssp ---------------------------------------------CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCC
T ss_pred ---------------------------------------------CCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCe
Confidence 123444333222234578999999999885443
Q ss_pred eEEEEECCEEccCCCcee-EEEe-CC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEEE
Q psy12422 220 RVSWTKNGQPLNSSNILD-LKYK-NG----VASLQIQEVFPEDEGVYVCTATNSLGTAETKC 275 (356)
Q Consensus 220 ~i~W~~~g~~~~~~~~~~-~~~~-~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 275 (356)
.|.|+++|..+....... .... ++ .+.|.|..+..+|+|.|+|.|.|.......++
T Consensus 148 ~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~v 209 (212)
T 1q0x_L 148 TVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKTL 209 (212)
T ss_dssp EEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEEE
T ss_pred EEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeeee
Confidence 799999999886542211 1111 11 24799999999999999999999987655554
No 133
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.89 E-value=3.3e-22 Score=162.46 Aligned_cols=173 Identities=16% Similarity=0.207 Sum_probs=116.2
Q ss_pred CCceEEEEEeccCC--CCeeEEeeCC--EEc------------------ccCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKGN--REL------------------SKRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~g--~~l------------------~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.|.| .+.|.|||+. ..+ ...++.+.. ..+..+|+|.+++.+|+|.|
T Consensus 17 G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y 96 (247)
T 2ghw_B 17 GKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVY 96 (247)
T ss_dssp TCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHHHCEEE
Confidence 78999999999887 5789999942 111 012333332 34567899999999999999
Q ss_pred EEEEEeCCce--eEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEE
Q psy12422 57 KCVATNKHGT--DETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQ 134 (356)
Q Consensus 57 ~C~a~n~~g~--~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~ 134 (356)
.|.|.|..+. ....+.|.|...+.....
T Consensus 97 ~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~-------------------------------------------------- 126 (247)
T 2ghw_B 97 YCARDRSYYLDYWGQGTLVTVSSGGGGSGG-------------------------------------------------- 126 (247)
T ss_dssp EEEEEETTEEEEECCCEEEEECSCC-------------------------------------------------------
T ss_pred EEeeeccCCccccCCceEEEEecccccccc--------------------------------------------------
Confidence 9999997332 222345665532110000
Q ss_pred EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEc
Q psy12422 135 MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVK 214 (356)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~ 214 (356)
.. + .....++.+...+....+.+|++++|.|.+.
T Consensus 127 ----------------------------------------~~--~----~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 160 (247)
T 2ghw_B 127 ----------------------------------------GG--S----GGGGSETTLTQSPATLSLSPGERATLSCRAS 160 (247)
T ss_dssp -----------------------------------------------------CCCCEEEECSEEEECTTSCEEEEEEES
T ss_pred ----------------------------------------cc--c----CCCCcceEEEccCCEEEecCCCcEEEEEEeC
Confidence 00 0 0002334455555667899999999999999
Q ss_pred CCCCCeEEEEE--CCEEcc------------CCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 215 GDPEPRVSWTK--NGQPLN------------SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 215 g~p~p~i~W~~--~g~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
+.|++.+.|+| +|..+. ...++.........+|.|.+++.+|+|.|.|.|.|..+
T Consensus 161 ~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~ 229 (247)
T 2ghw_B 161 QSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWP 229 (247)
T ss_dssp SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSS
T ss_pred CCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCC
Confidence 99999999999 554331 12334333345567899999999999999999998643
No 134
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.89 E-value=6.9e-23 Score=164.74 Aligned_cols=157 Identities=18% Similarity=0.325 Sum_probs=112.7
Q ss_pred CCceEEEEEeccCCC-CeeEEeeCCEEcc----------cCCe--eE-----------EecCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKPP-PTVKWYKGNRELS----------KRDY--SM-----------SYSDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p~-~~v~W~k~g~~l~----------~~~~--~~-----------~~~~~~~~L~i~~~~~~D~G~Y 56 (356)
|+++.|.|.+.+.|. +.+.|+|++.... ...+ .+ ...++ .|.|.+++.+|+|.|
T Consensus 15 G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y 92 (231)
T 2pet_A 15 GKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG--RLVLAEAQVGDERDY 92 (231)
T ss_dssp TCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC--CEEESSCCGGGCEEE
T ss_pred CCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc--eEEEcccCcccCceE
Confidence 789999999999985 8999998543311 0101 11 22233 499999999999999
Q ss_pred EEEEEeCC-ceeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEE
Q psy12422 57 KCVATNKH-GTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQM 135 (356)
Q Consensus 57 ~C~a~n~~-g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~ 135 (356)
+|.+.|.. +.....+.|.|...+.
T Consensus 93 ~C~~~~~~~~~~~~~~~l~V~~~p~------------------------------------------------------- 117 (231)
T 2pet_A 93 VCVVRAGAAGTAEATARLNVFAKPE------------------------------------------------------- 117 (231)
T ss_dssp EEEEECGGGCEEEEEEEEEEEBCCC-------------------------------------------------------
T ss_pred EEEEEecCCCceEEEEEEEEEecCC-------------------------------------------------------
Confidence 99999986 7777777887764311
Q ss_pred eeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeE-EEEEEE-
Q psy12422 136 STLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCL-DLSAVV- 213 (356)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~-~l~C~~- 213 (356)
.|.+...+....+.+|+.+ .|.|.+
T Consensus 118 -----------------------------------------------------~~~~~~~~~~~~~~~g~~~~~l~C~~~ 144 (231)
T 2pet_A 118 -----------------------------------------------------ATEVSPNKGTLSVMEDSAQEIATCNSR 144 (231)
T ss_dssp -----------------------------------------------------CCEEEECCSSCCTTCCSEEEEEEEEEE
T ss_pred -----------------------------------------------------CcEEecCCcceeecCCCceEEEEEEeE
Confidence 1333333344456789987 999999
Q ss_pred cCCCCCeEEEEECCEEccCCC----ceeEEEe----C-C----EEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 214 KGDPEPRVSWTKNGQPLNSSN----ILDLKYK----N-G----VASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 214 ~g~p~p~i~W~~~g~~~~~~~----~~~~~~~----~-~----~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
.|+|.|.+.|+++|..+.... +..+... . + .+.|.|.....+|+|.|+|.|.|.
T Consensus 145 ~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 145 NGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 899999999999999987655 3322211 1 1 156888866666799999999994
No 135
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.89 E-value=3.3e-22 Score=166.39 Aligned_cols=216 Identities=18% Similarity=0.202 Sum_probs=135.5
Q ss_pred cccccccCccceeeecccCCceeeecccccccCCccccCCCCceEE---EEeeccccccccccccCCCccceeeeeeccc
Q psy12422 88 AHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTT---QMSTLSSNYSSSTNNATSPSKKITRRMNSIL 164 (356)
Q Consensus 88 ~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (356)
....+.+|+.+.|.|.+.. .+.|+++........... ...... ....+.|.|.|...+..
T Consensus 12 ~~~~v~~G~~v~L~C~~~~--~v~W~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~~~~-------------- 74 (289)
T 3ejj_X 12 PELVVEPGETVTLRCVSNG--SVEWDGPISPYWTLDPES-PGSTLTTRNATFKNTGTYRCTELEDP-------------- 74 (289)
T ss_dssp SEEEECTTCCEEEEEECSS--CCEEECSCSSSSEECCCS-SCCEEEESSCCGGGCEEEEEECCC----------------
T ss_pred ceEEECCCCCEEEEEEeCC--cEEEccCCCceEEEeccC-CccEEEEeeeccccCEEEEEEEeccC--------------
Confidence 3445789999999999987 599996654322111111 111111 12233444555432211
Q ss_pred cCCCCCcccccceeeecCCCCCCCCCe-ecccCCceeecCCCeEEEEEEEcCCCCCe-EEEEE-CCEEccCCCceeEEEe
Q psy12422 165 DTDSPSRSRSTTKELIMPPDTAMTPPQ-FANKLTDKTIDDGQCLDLSAVVKGDPEPR-VSWTK-NGQPLNSSNILDLKYK 241 (356)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-i~W~~-~g~~~~~~~~~~~~~~ 241 (356)
+ .......+.+. .+|. +...+....+.+|+.+.|.|.+.+.|.+. +.|++ ++..+.....+... .
T Consensus 75 --~----~~~~~~~l~V~-----~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~-~ 142 (289)
T 3ejj_X 75 --M----AGSTTIHLYVK-----DPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFS-P 142 (289)
T ss_dssp ---------CEEEEEEEC-----CSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEE-T
T ss_pred --C----cceeEEEEEEe-----CCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEEC-C
Confidence 1 12233444442 2222 45555778899999999999999877765 99986 77777655554432 2
Q ss_pred CCEEEEEEccCCCCCCeEEEEEEE-cCCCceEEEEEEecC----CCCccc---------------------------eeE
Q psy12422 242 NGVASLQIQEVFPEDEGVYVCTAT-NSLGTAETKCKLTPL----NSSNIL---------------------------DLK 289 (356)
Q Consensus 242 ~~~~~L~i~~v~~~d~G~Y~C~a~-n~~g~~~~~~~l~p~----~~~~~~---------------------------~~~ 289 (356)
.+ .|.|.+++.+|+|.|+|.|. |..+.....+.+... .++.+. .+.
T Consensus 143 ~~--~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~ 220 (289)
T 3ejj_X 143 WR--GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVI 220 (289)
T ss_dssp TT--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEE
T ss_pred CC--CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEE
Confidence 22 69999999999999999999 444433333333311 111111 344
Q ss_pred EeC-------------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCC
Q psy12422 290 YKN-------------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPA 334 (356)
Q Consensus 290 ~~~-------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 334 (356)
|.. ..+.|.|.+++.+|+|.|+|.|.|..|..++++.|.+..++.
T Consensus 221 W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 221 LKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHH 284 (289)
T ss_dssp EEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC----
T ss_pred EEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEeccc
Confidence 432 156899999999999999999999999999999999887764
No 136
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.89 E-value=5.7e-22 Score=154.55 Aligned_cols=154 Identities=16% Similarity=0.241 Sum_probs=106.4
Q ss_pred CCceEEEEEecc-CCCCeeEEeeCCEEcc---cCC------------e--eEEecCCeEEEEEeeCCCCCCeEEEEEEEe
Q psy12422 1 MQNVIKVKVGST-KPPPTVKWYKGNRELS---KRD------------Y--SMSYSDGVVSMEIIDCKPEDSGEYKCVATN 62 (356)
Q Consensus 1 g~~v~l~C~~~g-~p~~~v~W~k~g~~l~---~~~------------~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 62 (356)
|++|+|.|.+.+ .|.+.|.|+|+|..+. ... + +.... ...+|+|.+++.+|+|.|+|.+.|
T Consensus 13 G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-~~~sL~I~~v~~~D~G~Y~C~~~~ 91 (193)
T 2if7_A 13 GESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT-QSYSLQLSNLKMEDTGSYRAQIST 91 (193)
T ss_dssp TSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC-TTCCEEECSCCGGGCEEEEEEEEC
T ss_pred cCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC-CCeEEEECCCCcccCceEEEEEEe
Confidence 799999999965 5567999999987652 100 0 11111 234799999999999999999999
Q ss_pred CCceeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccc
Q psy12422 63 KHGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNY 142 (356)
Q Consensus 63 ~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (356)
..+.....+.|.|...+..
T Consensus 92 ~~~~~~~~~~L~V~~~~~~------------------------------------------------------------- 110 (193)
T 2if7_A 92 KTSAKLSSYTLRILRQLRN------------------------------------------------------------- 110 (193)
T ss_dssp SSCEEEEEEEEEEECCCEE-------------------------------------------------------------
T ss_pred cCCCeEEEEEEEEEccCCC-------------------------------------------------------------
Confidence 9887777777777543110
Q ss_pred cccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCC-eEEEEEEEcCC-CCCe
Q psy12422 143 SSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQ-CLDLSAVVKGD-PEPR 220 (356)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~-~~~l~C~~~g~-p~p~ 220 (356)
|.+.... .....|. .++|.|.+.|. |.|.
T Consensus 111 -----------------------------------------------p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~ 141 (193)
T 2if7_A 111 -----------------------------------------------IQVTNHS--QLFQNMTCELHLTCSVEDADDNVS 141 (193)
T ss_dssp -----------------------------------------------EEEEECC--C---CSSEEEEEEEEEESCCTTCE
T ss_pred -----------------------------------------------CeEecCc--eeecCCCceEEEEEEEecCCCceE
Confidence 1111111 0123455 79999999885 5789
Q ss_pred EEEEECCEEccCCCceeEEEeCCEEEEEEccCCCC-CCeEEEEEEEcCCCceEEEEE
Q psy12422 221 VSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPE-DEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 221 i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~-d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
+.|+++|..+.... .|.|.....+ |+|.|+|.|.|..|.....+.
T Consensus 142 i~W~~~g~~l~~~~-----------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 142 FRWEALGNTLSSQP-----------NLTVSWDPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp EEEEETTEEEESSS-----------EEEEEECTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCEEcCCCC-----------eEEEEeccCcCCCCcEEEEEECCCCccccccc
Confidence 99999998764322 4666554554 899999999999998765443
No 137
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.89 E-value=2e-23 Score=183.98 Aligned_cols=248 Identities=12% Similarity=0.107 Sum_probs=143.8
Q ss_pred CCceEEEEEeccC-CCC-eeEEeeCCEEcccCCeeEEecCCe----EEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12422 1 MQNVIKVKVGSTK-PPP-TVKWYKGNRELSKRDYSMSYSDGV----VSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVI 74 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~-~v~W~k~g~~l~~~~~~~~~~~~~----~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 74 (356)
|++++|.|.+.|. |.| .|+|+|+|..+...........+. ..|+|.+++.+| |.|+|.|.|..|.......+.
T Consensus 134 G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~ 212 (434)
T 1igy_B 134 NSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIV 212 (434)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECC
T ss_pred CCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeecc
Confidence 7899999999876 776 999999987642110000011121 368999999889 999999999988754444443
Q ss_pred Eec---------cccchhh-hhhcc-c-ccccCccceeeecccC------CceeeecccccccCCcccc----CCCCc--
Q psy12422 75 VES---------EEESKEQ-QELAH-N-FLYSGDRKYIEKHIRP------APAIITTRQEIKSSYSSHT----DDTGR-- 130 (356)
Q Consensus 75 v~~---------~~~~~~~-~~~~~-~-~~~~g~~~~l~c~~~p------~p~i~w~~~~~~~~~~~~~----~~~~~-- 130 (356)
+.+ ....+.. ...+. . .+.+|+.+.|.|.+.. .+.+.|++++..+...... ...+.
T Consensus 213 ~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~ 292 (434)
T 1igy_B 213 PRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFR 292 (434)
T ss_dssp CCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCC
T ss_pred CCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEE
Confidence 321 0000110 11111 1 2789999999999872 2369999988665322110 00000
Q ss_pred ---eEEE---EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCC
Q psy12422 131 ---TTTQ---MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDG 204 (356)
Q Consensus 131 ---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g 204 (356)
.... ...+.+.|.|.+.+..... .....+.+.. ....+|.+...+......+|
T Consensus 293 ~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~--------------------~~~~~v~~~~-~~~~~P~v~~~~~~~~~~~~ 351 (434)
T 1igy_B 293 VVSALPIMHQDWLNGKEFKCRVNSAAFPA--------------------PIEKTISKTK-GKPRAPQVYTIPPPKEQMAK 351 (434)
T ss_dssp CCCCEECCHHHHHHTCCCBCCBCCSSCSS--------------------CCCCCCCCCC-SCCBCCCCEEECCCSSSSSS
T ss_pred EEEEEEECHHHccCCCcEEEEEECCCCCC--------------------ceeEEEeccC-CCCcCCEEEEECCCHHHhcC
Confidence 0011 1224466776664433211 0011111100 11345655544433334467
Q ss_pred CeEEEEEEEcCC-CC-CeEEEEECCEEccCCCceeE--EEeCC---EEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 205 QCLDLSAVVKGD-PE-PRVSWTKNGQPLNSSNILDL--KYKNG---VASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 205 ~~~~l~C~~~g~-p~-p~i~W~~~g~~~~~~~~~~~--~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
+.++|.|.+.|. |+ +.|+|+|+|..+........ ..++. .+.|.|.....+|+|.|+|.|.|....
T Consensus 352 ~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 352 DKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp SEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred CcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 789999999885 43 37999999988753221111 11111 246788888888999999999998764
No 138
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.89 E-value=4.1e-22 Score=168.98 Aligned_cols=213 Identities=16% Similarity=0.123 Sum_probs=136.3
Q ss_pred ccccCccceeeeccc-----------CCceeeecccccccCCccccCCCCceE--EEEeeccc-cccccccccCCCccce
Q psy12422 91 FLYSGDRKYIEKHIR-----------PAPAIITTRQEIKSSYSSHTDDTGRTT--TQMSTLSS-NYSSSTNNATSPSKKI 156 (356)
Q Consensus 91 ~~~~g~~~~l~c~~~-----------p~p~i~w~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~ 156 (356)
.+.+|+.+.|.|.+. |.+.+.|++++................ .....+.| .|.|.+.+..+...
T Consensus 40 ~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~-- 117 (329)
T 3oq3_B 40 MAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGDCV-- 117 (329)
T ss_dssp EECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSCEE--
T ss_pred EEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCcee--
Confidence 467999999999975 335799999887654321111111111 11233456 56666544332110
Q ss_pred eeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCC-CCeEEEEECCEEccCCCc
Q psy12422 157 TRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDP-EPRVSWTKNGQPLNSSNI 235 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p-~p~i~W~~~g~~~~~~~~ 235 (356)
.....+.+ ..+|.+........+.+|+.+.|.|.+.|.| .|.+.|+++|..+.....
T Consensus 118 -----------------~~~~~~v~-----~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~ 175 (329)
T 3oq3_B 118 -----------------QGIVRSHI-----RKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGT 175 (329)
T ss_dssp -----------------EEEEEEEE-----CCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSS
T ss_pred -----------------eEEEEEEE-----cCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCc
Confidence 00111112 2234443333344567899999999999999 899999999999864332
Q ss_pred eeEEEeCCEEEEEEccCCCCCCeEEEEEEEcC--CCceEEE----EEEecCCC---------------------------
Q psy12422 236 LDLKYKNGVASLQIQEVFPEDEGVYVCTATNS--LGTAETK----CKLTPLNS--------------------------- 282 (356)
Q Consensus 236 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~--~g~~~~~----~~l~p~~~--------------------------- 282 (356)
. +...+ ..|.|.+++.+|+|.|+|.|.|. .|..... +.|.+...
T Consensus 176 ~-~~~~~--~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~ 252 (329)
T 3oq3_B 176 K-YSQSG--QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTA 252 (329)
T ss_dssp S-EEEET--TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEE
T ss_pred e-EecCC--CEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEE
Confidence 2 22223 38999999999999999999997 6543332 32321100
Q ss_pred ---C---ccceeEEeC----------------------CeEEEEEecCCCCCCe-EEEEEEEcCCcceEEEEEEEEE
Q psy12422 283 ---S---NILDLKYKN----------------------GVASLQIQEVFPEDEG-VYVCTATNSLGTAETKCKLTVR 330 (356)
Q Consensus 283 ---~---~~~~~~~~~----------------------~~~~L~i~~v~~~d~G-~Y~C~a~n~~g~~~~~~~l~V~ 330 (356)
| ....+.|.. ....|.|.+++.+|+| .|+|.|.|..|.....+.|.|+
T Consensus 253 ~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 253 VSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp EETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEEC
T ss_pred EECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEeC
Confidence 0 000235533 1467999999999999 9999999999999999998874
No 139
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.89 E-value=8.9e-23 Score=161.75 Aligned_cols=167 Identities=16% Similarity=0.177 Sum_probs=117.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeC--CEEc-------------ccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKG--NREL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~--g~~l-------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+. |.+.+.|||+ |..+ ...++......+..+|+|.+++.+|+|.|.|.+.|..+
T Consensus 15 G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 92 (211)
T 3tv3_L 15 GQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVGNW 92 (211)
T ss_dssp TCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEEEETTT
T ss_pred CCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEEecCCC
Confidence 78999999998 8899999994 3222 11244444456677999999999999999999999877
Q ss_pred --eeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecccccc
Q psy12422 66 --TDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYS 143 (356)
Q Consensus 66 --~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (356)
.....+.|.|...+
T Consensus 93 ~~~~~~~~~l~V~~~~---------------------------------------------------------------- 108 (211)
T 3tv3_L 93 DVIFGGGTKLTVLGQP---------------------------------------------------------------- 108 (211)
T ss_dssp EEEECCCEEEEECCSC----------------------------------------------------------------
T ss_pred ceeECCCceEEEeCCC----------------------------------------------------------------
Confidence 23344555554210
Q ss_pred ccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCC--CCeE
Q psy12422 144 SSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDP--EPRV 221 (356)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p--~p~i 221 (356)
..+|.+...+....+.+|+.++|.|.+.|.+ .+.+
T Consensus 109 -------------------------------------------~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v 145 (211)
T 3tv3_L 109 -------------------------------------------KAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTV 145 (211)
T ss_dssp -------------------------------------------CBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEE
T ss_pred -------------------------------------------CcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEE
Confidence 2334444444333445799999999998853 4789
Q ss_pred EEEECCEEccCCCcee--EEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 222 SWTKNGQPLNSSNILD--LKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 222 ~W~~~g~~~~~~~~~~--~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
.|+++|..+....... .....+ .+.|.|.++..+|+|.|+|.|.|..+....++.
T Consensus 146 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 146 AWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp EEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEEC
T ss_pred EEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeecc
Confidence 9999999886521111 011111 257999999999999999999999987766553
No 140
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.89 E-value=8.9e-23 Score=162.60 Aligned_cols=169 Identities=17% Similarity=0.211 Sum_probs=112.9
Q ss_pred CCceEEEEEeccC-CCCeeEEeeCC--EE-------------cc----cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEE
Q psy12422 1 MQNVIKVKVGSTK-PPPTVKWYKGN--RE-------------LS----KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 60 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~~v~W~k~g--~~-------------l~----~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 60 (356)
|++|+|.|.+.+. |.+.|.|||+. .. .. ..++......+..+|+|.+++.+|+|.|.|.+
T Consensus 15 G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 94 (218)
T 3s96_B 15 GASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEAIYICGV 94 (218)
T ss_dssp TSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCEEEEEEE
Confidence 7999999999988 89999999931 11 00 02333333556678999999999999999999
Q ss_pred EeCCc-----eeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEE
Q psy12422 61 TNKHG-----TDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQM 135 (356)
Q Consensus 61 ~n~~g-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~ 135 (356)
.|..| .....+.|.|...+
T Consensus 95 ~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------------------------- 118 (218)
T 3s96_B 95 GDTIKEQFVYVFGGGTKVTVLGQP-------------------------------------------------------- 118 (218)
T ss_dssp EEEETTEEEEEECCCEEEEEESCC--------------------------------------------------------
T ss_pred ecCCCCceeEEEcCcEEEEEecCC--------------------------------------------------------
Confidence 98765 22233455554210
Q ss_pred eeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC
Q psy12422 136 STLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG 215 (356)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g 215 (356)
..+|.+...+....+..|+.++|.|.+.|
T Consensus 119 ---------------------------------------------------~~~P~~~~~~~~~~~~~~~~v~L~C~~~g 147 (218)
T 3s96_B 119 ---------------------------------------------------KSTPTLTVFPPSSEELKENKATLVCLISN 147 (218)
T ss_dssp ---------------------------------------------------CBCCEEEEECCCHHHHHTTEEEEEEEEEE
T ss_pred ---------------------------------------------------CCCceEEeeCCCcccccCCcEEEEEEECc
Confidence 12344433232334456789999999987
Q ss_pred -CCCC-eEEEEECCEEccCCCceeE--EEeCC---EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 216 -DPEP-RVSWTKNGQPLNSSNILDL--KYKNG---VASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 216 -~p~p-~i~W~~~g~~~~~~~~~~~--~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
.|.| .|.|+++|..+........ ..++. .+.|.|.....+|+|.|+|.|.|..+....++.
T Consensus 148 ~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 215 (218)
T 3s96_B 148 FSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSLS 215 (218)
T ss_dssp EBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEEC
T ss_pred ccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccccc
Confidence 6777 8999999998875321110 11111 135889999889999999999999987766543
No 141
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.88 E-value=7.8e-22 Score=161.72 Aligned_cols=148 Identities=20% Similarity=0.273 Sum_probs=116.1
Q ss_pred CCceEEEEEe-ccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVG-STKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~-~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+ .+.|.+.+.|+|+|..+... ..+ ..|.|.+++.+|+|.|+|.+.|..+..+..+.|.|...
T Consensus 97 g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-----~~~--~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~- 168 (262)
T 3rjd_A 97 GEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-----HWN--SNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKEL- 168 (262)
T ss_dssp TSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----EEC--CCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECS-
T ss_pred CCeEEEEEEccCCCCCceEEEEECCcccccc-----CCC--CeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccC-
Confidence 7899999999 78888999999999987522 112 27999999999999999999999988777788877642
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
T Consensus 169 -------------------------------------------------------------------------------- 168 (262)
T 3rjd_A 169 -------------------------------------------------------------------------------- 168 (262)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCC-Ce----EEEEECCEEccCCC
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE-PR----VSWTKNGQPLNSSN 234 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-p~----i~W~~~g~~~~~~~ 234 (356)
..+|.+...+ ...+.+|+.+.|.|.+.+.|. |. +.|++++..+...
T Consensus 169 ---------------------------~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~- 219 (262)
T 3rjd_A 169 ---------------------------FPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR- 219 (262)
T ss_dssp ---------------------------SCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE-
T ss_pred ---------------------------CCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc-
Confidence 1223333333 345788999999999999986 54 7889999877521
Q ss_pred ceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceE
Q psy12422 235 ILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAE 272 (356)
Q Consensus 235 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 272 (356)
.....|.|.+++.+|+|.|+|.|.|..|...
T Consensus 220 -------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~ 250 (262)
T 3rjd_A 220 -------NTSSEYQILTARREDSGLYWCEAATEDGNVL 250 (262)
T ss_dssp -------ESCCEEEESSCCGGGCEEEEEEEEETTSSCE
T ss_pred -------CCCceEEEEEechhhCeEEEEEEEcccCceE
Confidence 1234899999999999999999999999753
No 142
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.88 E-value=5.4e-22 Score=155.02 Aligned_cols=144 Identities=32% Similarity=0.534 Sum_probs=115.9
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC--ceeEEEeCCEEEEEEccCCCCCCeEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN--ILDLKYKNGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+.... .......++...|.|.+++.+|+|.|+|.|
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEE
Confidence 346778777888899999999999999999999999999998887653 455666677889999999999999999999
Q ss_pred EcCCCceEEEEEEecC---CCCccc--------------------------eeEEeC-----------------CeEEEE
Q psy12422 265 TNSLGTAETKCKLTPL---NSSNIL--------------------------DLKYKN-----------------GVASLQ 298 (356)
Q Consensus 265 ~n~~g~~~~~~~l~p~---~~~~~~--------------------------~~~~~~-----------------~~~~L~ 298 (356)
.|..|.......+... .++.+. .+.|.. ....|.
T Consensus 83 ~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~ 162 (194)
T 2a38_A 83 TNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLL 162 (194)
T ss_dssp EETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEE
T ss_pred EcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEE
Confidence 9999887766555421 111110 344432 223799
Q ss_pred EecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy12422 299 IQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 330 (356)
Q Consensus 299 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 330 (356)
|.+++.+|+|.|+|.|.|..|..+..+.|.|+
T Consensus 163 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 163 IAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 99999999999999999999999999999885
No 143
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.88 E-value=5.1e-22 Score=167.25 Aligned_cols=148 Identities=14% Similarity=0.211 Sum_probs=106.3
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEE-cCCCCCeEEEEECCEEccCCCceeEEEeCC---EEEEEEccCCCCCCeEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVV-KGDPEPRVSWTKNGQPLNSSNILDLKYKNG---VASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C 262 (356)
..+|.+...+....+..|+.+.|.|.+ .++|.|.+.|++++..+..........++. .+.|.|.....+|+|.|+|
T Consensus 115 ~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C 194 (313)
T 4fqp_A 115 LAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTC 194 (313)
T ss_dssp BBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEE
T ss_pred ccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEE
Confidence 455666665666677888999999987 588999999999987765432221111111 2469999999999999999
Q ss_pred EEEcCCCceEE--EEEEecCCCCcc----------------------------ceeEEeC-----------CeEEEEEec
Q psy12422 263 TATNSLGTAET--KCKLTPLNSSNI----------------------------LDLKYKN-----------GVASLQIQE 301 (356)
Q Consensus 263 ~a~n~~g~~~~--~~~l~p~~~~~~----------------------------~~~~~~~-----------~~~~L~i~~ 301 (356)
.|.|..+.... .+.|....+|.+ ..+.|.. .+..|.|.+
T Consensus 195 ~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~ 274 (313)
T 4fqp_A 195 KVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRP 274 (313)
T ss_dssp EEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECC
T ss_pred EEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEEEECc
Confidence 99998775433 333321111110 0355653 225799999
Q ss_pred CCCCCCeEEEEEEEcCCcceEEEEEEEEEecCC
Q psy12422 302 VFPEDEGVYVCTATNSLGTAETKCKLTVRSTPA 334 (356)
Q Consensus 302 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 334 (356)
++.+|+|.|+|.|.|..|..+..+.|.|+++|.
T Consensus 275 v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP 307 (313)
T 4fqp_A 275 VDKPINTTLICNVTNALGARQAELTVQVKEGPP 307 (313)
T ss_dssp CSSCCEEEEEEEEECSSCEEEEEEEEEEECCC-
T ss_pred CChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCC
Confidence 999999999999999999999999999998764
No 144
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.88 E-value=1.5e-21 Score=154.86 Aligned_cols=149 Identities=28% Similarity=0.505 Sum_probs=116.0
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEcc-CCCceeEEE-eCCEEEEEEccCCC-CCCeEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLN-SSNILDLKY-KNGVASLQIQEVFP-EDEGVYVCT 263 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~-~~~~~~~~~-~~~~~~L~i~~v~~-~d~G~Y~C~ 263 (356)
..||.+...+....+.+|+.+.|.|.+.|+|.+.+.|+++|..+. ...++.... .++...|.|.+++. +|+|.|+|.
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 567889888989999999999999999999999999999999987 344444433 35568999999999 999999999
Q ss_pred EEcCCCc-eEEEEEEecCCC-------Cccc--------------------------eeEEeCC--------------eE
Q psy12422 264 ATNSLGT-AETKCKLTPLNS-------SNIL--------------------------DLKYKNG--------------VA 295 (356)
Q Consensus 264 a~n~~g~-~~~~~~l~p~~~-------~~~~--------------------------~~~~~~~--------------~~ 295 (356)
|.|..|. ....+.|.+... +.+. .+.|..+ .+
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~ 163 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDG 163 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETT
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCC
Confidence 9999998 555555552211 1111 3455431 23
Q ss_pred EEEEecCCCCCCeEEEEEEEcCCcceEEE-EEEEEEecCCC
Q psy12422 296 SLQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTVRSTPAA 335 (356)
Q Consensus 296 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p~~ 335 (356)
.|.|.+++.+|+|.|+|.|.|..|...+. +.|.|++++.-
T Consensus 164 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~ 204 (212)
T 2yd1_A 164 FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRVG 204 (212)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C
T ss_pred eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecccc
Confidence 79999999999999999999999999874 89999988653
No 145
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.88 E-value=6.9e-23 Score=181.07 Aligned_cols=245 Identities=12% Similarity=0.125 Sum_probs=141.1
Q ss_pred CCceEEEEEeccC-CCC-eeEEeeCCEEccc--CCeeEEecCCe----EEEEEeeCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12422 1 MQNVIKVKVGSTK-PPP-TVKWYKGNRELSK--RDYSMSYSDGV----VSMEIIDCKPEDSGEYKCVATNKHGTDETNCV 72 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~-~v~W~k~g~~l~~--~~~~~~~~~~~----~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 72 (356)
|+++.|.|.+.|. |.| .|+|+|+|..+.. ... ... .+. ..|+|.+++.+| |.|+|.|.|..+.......
T Consensus 138 g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~-~~~-~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~ 214 (444)
T 1igt_B 138 GSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA-VLQ-SDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKK 214 (444)
T ss_dssp SSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCC-EEE-TTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCc-ccc-CCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEE
Confidence 7899999999874 776 9999999886421 111 111 121 368999999899 9999999999887654444
Q ss_pred EEEecc-------------c--cchhh-hhhcc-cc-cccCccceeeeccc--C----CceeeecccccccCCccccC--
Q psy12422 73 VIVESE-------------E--ESKEQ-QELAH-NF-LYSGDRKYIEKHIR--P----APAIITTRQEIKSSYSSHTD-- 126 (356)
Q Consensus 73 l~v~~~-------------~--~~~~~-~~~~~-~~-~~~g~~~~l~c~~~--p----~p~i~w~~~~~~~~~~~~~~-- 126 (356)
+.+.+. . ..+.. ...+. .. +.+|+.+.|.|.+. + .+.+.|++++..+.......
T Consensus 215 i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~ 294 (444)
T 1igt_B 215 IEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHR 294 (444)
T ss_dssp CCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCE
T ss_pred eccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccce
Confidence 433110 0 01110 11111 12 58899999999986 2 24799999886654321110
Q ss_pred --CCCce-E---EE----EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccC
Q psy12422 127 --DTGRT-T---TQ----MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL 196 (356)
Q Consensus 127 --~~~~~-~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 196 (356)
..+.. . .. ...+.+.|.|.+.+..... .....+.+. .....+|.+...+
T Consensus 295 ~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~--------------------~~~~~v~~~-~~~~~~P~v~~~~ 353 (444)
T 1igt_B 295 EDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPA--------------------PIERTISKP-KGSVRAPQVYVLP 353 (444)
T ss_dssp EECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSS--------------------CEEEEEECC-CCCCBCCEEEEEC
T ss_pred eCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCC--------------------ceEEEEecc-CCCCCCCEEEEeC
Confidence 00000 0 00 1123355555543322211 011122110 1114566665443
Q ss_pred C-ceeecCCCeEEEEEEEcC-CCCC-eEEEEECCEEccCCCceeEE-EeCC----EEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 197 T-DKTIDDGQCLDLSAVVKG-DPEP-RVSWTKNGQPLNSSNILDLK-YKNG----VASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 197 ~-~~~v~~g~~~~l~C~~~g-~p~p-~i~W~~~g~~~~~~~~~~~~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
. ...+. +..++|.|.+.| +|++ .|+|+++|..+......... ..++ .+.|.|.....+|.|.|+|+|.|..
T Consensus 354 ~~~~~~~-~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 354 PPEEEMT-KKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp CCGGGTT-SSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTT
T ss_pred CChHHcc-CCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCC
Confidence 2 22334 445999999988 5665 89999999988432111111 1122 1457777777788999999999986
Q ss_pred Cc
Q psy12422 269 GT 270 (356)
Q Consensus 269 g~ 270 (356)
-.
T Consensus 433 l~ 434 (444)
T 1igt_B 433 LH 434 (444)
T ss_dssp SG
T ss_pred cC
Confidence 43
No 146
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.88 E-value=8.7e-22 Score=154.20 Aligned_cols=146 Identities=25% Similarity=0.426 Sum_probs=120.3
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..........++....|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 45678888888899999999999999999999999999999999888777777777778999999999999999999999
Q ss_pred CCCceEEEEEEe----cCCCC-----c-cc-------------------eeEEeC-----------------CeEEEEEe
Q psy12422 267 SLGTAETKCKLT----PLNSS-----N-IL-------------------DLKYKN-----------------GVASLQIQ 300 (356)
Q Consensus 267 ~~g~~~~~~~l~----p~~~~-----~-~~-------------------~~~~~~-----------------~~~~L~i~ 300 (356)
..|.......+. |.... . .. .+.|.. ....|.|.
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 164 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMK 164 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEES
T ss_pred CCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEc
Confidence 999877766665 11110 0 00 344432 22679999
Q ss_pred cCCC-CCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy12422 301 EVFP-EDEGVYVCTATNSLGTAETKCKLTVRST 332 (356)
Q Consensus 301 ~v~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 332 (356)
++.. +|+|.|+|.|.|..|..+..+.|.|+++
T Consensus 165 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~k 197 (197)
T 3lcy_A 165 NVQRKTHAGKYKVQLSNVFGTVDAILDVEIQDK 197 (197)
T ss_dssp SCCHHHHCEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred cccchhhCceEEEEEEcCcCceEEEEEEEEecC
Confidence 9995 8999999999999999999999999763
No 147
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.88 E-value=5.5e-22 Score=159.83 Aligned_cols=153 Identities=12% Similarity=0.109 Sum_probs=109.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCcee--EEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD--ETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~--~~~~~l~v~~~ 78 (356)
|++|+|.|.+.+ +.+.+.|||+|..+...............|.|.+++.+|+|.|+|.+.|..+.. +..+.|.|.+.
T Consensus 21 G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~ 99 (242)
T 1p6f_A 21 EKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEM 99 (242)
T ss_dssp TCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECC
T ss_pred CCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecc
Confidence 789999999865 356899999998775211001122334589999999999999999998864432 23355555421
Q ss_pred ccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
T Consensus 100 -------------------------------------------------------------------------------- 99 (242)
T 1p6f_A 100 -------------------------------------------------------------------------------- 99 (242)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeE
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~ 238 (356)
..+|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+.. ..
T Consensus 100 ----------------------------~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~----~~ 145 (242)
T 1p6f_A 100 ----------------------------YDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QR 145 (242)
T ss_dssp ----------------------------SCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE----EE
T ss_pred ----------------------------cCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCc----cc
Confidence 2234444333 2358899999999999764 468999999876543 12
Q ss_pred EEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 239 KYKNGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
........|.|.+++.+|+|.|+|.|.|..
T Consensus 146 ~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~ 175 (242)
T 1p6f_A 146 GYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 175 (242)
T ss_dssp EECSSEEEEEEEECCGGGCEEEEEEEEEET
T ss_pred cCCCceEEEEeCCCccccCEEEEEEEECCC
Confidence 233456789999999999999999999864
No 148
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.88 E-value=1.5e-21 Score=159.32 Aligned_cols=158 Identities=19% Similarity=0.211 Sum_probs=111.6
Q ss_pred CCceEEEEEeccCC--CCeeEEeeC--CEEcc------------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKG--NRELS------------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~--g~~l~------------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.|.| .+.|.|||+ +..+. ..++.+.. ..+..+|+|.+++.+|+|.|
T Consensus 15 G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y 94 (256)
T 1nqb_A 15 GASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVY 94 (256)
T ss_dssp TCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChhhCEEE
Confidence 78999999998876 678999994 32210 12333332 24567999999999999999
Q ss_pred EEEEEeCCce-----eEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCce
Q psy12422 57 KCVATNKHGT-----DETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRT 131 (356)
Q Consensus 57 ~C~a~n~~g~-----~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~ 131 (356)
.|.+.|..|. ....+.|.|.
T Consensus 95 ~C~~~n~~g~~~~~~~~~~~~L~V~------------------------------------------------------- 119 (256)
T 1nqb_A 95 YCARYDYYGSSYFDYWGQGTTVTVS------------------------------------------------------- 119 (256)
T ss_dssp EEEECCTTSSSSCSEECCCEEEEEC-------------------------------------------------------
T ss_pred EEEEeeccCccceeEEcCceeeeec-------------------------------------------------------
Confidence 9999987552 1111223322
Q ss_pred EEEEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEE
Q psy12422 132 TTQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSA 211 (356)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C 211 (356)
.+|.+...+....+.+|++++|.|
T Consensus 120 --------------------------------------------------------~~~~v~~~p~~~~v~~G~~v~L~C 143 (256)
T 1nqb_A 120 --------------------------------------------------------SDIELTQTPLSLPVSLGDQASISC 143 (256)
T ss_dssp --------------------------------------------------------CCCCEEEECSEEEECTTCCEEEEE
T ss_pred --------------------------------------------------------ccccEEecCcEEEEecCCcEEEEe
Confidence 123333344556789999999999
Q ss_pred EEcCCCCC-----eEEEEE--CCEEcc------------CCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 212 VVKGDPEP-----RVSWTK--NGQPLN------------SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 212 ~~~g~p~p-----~i~W~~--~g~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
.+.+.|++ .+.|+| +|..+. ...++.........+|.|.+++.+|+|.|.|.|.|...
T Consensus 144 ~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~ 220 (256)
T 1nqb_A 144 RSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVP 220 (256)
T ss_dssp EESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred EecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCc
Confidence 99998875 899999 554331 12344444455667899999999999999999998543
No 149
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.88 E-value=1.1e-22 Score=162.57 Aligned_cols=84 Identities=18% Similarity=0.323 Sum_probs=62.1
Q ss_pred eecCCCeEEEEEEE-cCCCCCeEEEEE-CCEEccCCCceeEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEE
Q psy12422 200 TIDDGQCLDLSAVV-KGDPEPRVSWTK-NGQPLNSSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKC 275 (356)
Q Consensus 200 ~v~~g~~~~l~C~~-~g~p~p~i~W~~-~g~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 275 (356)
.+.+|+.+.|.|.+ .|+|.|.+.|++ ++..+........... +....|.|.+++.+|+|.|+|.|.|..|....++
T Consensus 121 ~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 200 (222)
T 4i0k_A 121 DLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHG 200 (222)
T ss_dssp ---CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEE
T ss_pred eecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEE
Confidence 57789999999999 899999999999 5555543322222211 2235689999999999999999999999999998
Q ss_pred EEecCCCC
Q psy12422 276 KLTPLNSS 283 (356)
Q Consensus 276 ~l~p~~~~ 283 (356)
.+....+|
T Consensus 201 ~l~V~~~p 208 (222)
T 4i0k_A 201 SVTITGQP 208 (222)
T ss_dssp EEECCC--
T ss_pred EEEEeCCc
Confidence 88855433
No 150
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.88 E-value=6.4e-23 Score=161.24 Aligned_cols=64 Identities=20% Similarity=0.372 Sum_probs=53.0
Q ss_pred CCCeEEEEEEEcCCCCCeEEEEECCEEccCCC-ceeEEEeCCEEEEEEccC-CCCCCeEEEEEEEcCCCc
Q psy12422 203 DGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN-ILDLKYKNGVASLQIQEV-FPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 203 ~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~-~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~a~n~~g~ 270 (356)
+|++++|.|. |.|.|.+.|+++|..+.... ...+....+ .|.|.++ +.+|+|.|+|.|.|..|.
T Consensus 127 ~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~--~L~I~~v~~~~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 127 SGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDED--HLSLKEFSELEQSGYYVCYPRGSKPE 192 (204)
T ss_dssp ETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEETT--EEEETTCCHHHHCEEEEEEETTSCGG
T ss_pred cCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCCC--EEEEeeCCccccCEEEEEEeccCCCC
Confidence 8999999999 78999999999999886532 112222344 8999999 999999999999999996
No 151
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.88 E-value=6e-22 Score=164.98 Aligned_cols=209 Identities=14% Similarity=0.132 Sum_probs=135.2
Q ss_pred cccccccCccceeeecccCCceeeecccccccCCccccCCCCceEE---EEeeccccccccccccCCCccceeeeeeccc
Q psy12422 88 AHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTT---QMSTLSSNYSSSTNNATSPSKKITRRMNSIL 164 (356)
Q Consensus 88 ~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (356)
....+.+|+.+.|.|.+.. .+.|++++....... . .+.... ....+.|.|.|.+.+
T Consensus 20 ~~~~v~~G~~v~l~C~~~~--~i~W~~~~~~~~~~~--~-~~~~L~i~~~~~~d~G~Y~C~~~n---------------- 78 (290)
T 2o26_X 20 SELIVEAGDTLSLTCIDPD--FVRWTFKTYFNEMVE--N-KKNEWIQEKAEATRTGTYTCSNSN---------------- 78 (290)
T ss_dssp SEEEEETTSCEEEEEECTT--EEEEEEECSSSCEEE--E-CSSEEEETTCCGGGCEEEEEEESS----------------
T ss_pred CeEEEcCCCcEEEEECCCC--cEEEecCCcceeeec--C-CCceEEEeccCHHhCeEEEEEeeC----------------
Confidence 3445789999999999988 999999877651100 0 001111 122233444444322
Q ss_pred cCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCC-CeEEEE-ECCEEccCCCceeEEEeC
Q psy12422 165 DTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE-PRVSWT-KNGQPLNSSNILDLKYKN 242 (356)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-p~i~W~-~~g~~~~~~~~~~~~~~~ 242 (356)
.. .....+.+ ..+|.....+....+.+|+.+.|.|.+.+ |. +.+.|+ +||..+....++.... .
T Consensus 79 -----g~--~~~~~l~V-----~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~-~ 144 (290)
T 2o26_X 79 -----GL--TSSIYVFV-----RDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNP-K 144 (290)
T ss_dssp -----SC--EEEEEEEE-----ECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEET-T
T ss_pred -----Cc--cEEEEEEE-----eCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCC-C
Confidence 11 23333443 22333334556678899999999999995 87 899995 6888876654433322 2
Q ss_pred CEEEEEEccCCCCCCe-EEEEEEEcCCCceEE-EEEEe----cCCCCccc---------------------------eeE
Q psy12422 243 GVASLQIQEVFPEDEG-VYVCTATNSLGTAET-KCKLT----PLNSSNIL---------------------------DLK 289 (356)
Q Consensus 243 ~~~~L~i~~v~~~d~G-~Y~C~a~n~~g~~~~-~~~l~----p~~~~~~~---------------------------~~~ 289 (356)
+ .|.|.+++.+|+| .|+|.|.|..+.... .+.+. +..+|.+. .+.
T Consensus 145 ~--~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~ 222 (290)
T 2o26_X 145 A--GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSM 222 (290)
T ss_dssp T--EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEE
T ss_pred C--CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEE
Confidence 2 7999999999999 999999998654322 22332 11111110 244
Q ss_pred EeC------------------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecC
Q psy12422 290 YKN------------------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTP 333 (356)
Q Consensus 290 ~~~------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 333 (356)
|.. ..+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|+.+|
T Consensus 223 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 223 WLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp EEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred EecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 432 24679999999999999999999999999999999998876
No 152
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.88 E-value=1.5e-23 Score=166.29 Aligned_cols=166 Identities=17% Similarity=0.244 Sum_probs=112.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeC--CEEcc-------------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKG--NRELS-------------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~--g~~l~-------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+.|.+.|.|||+ |..+. ..++......+..+|+|.+++.+|+|.|+|.+.|..+
T Consensus 14 G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~ 93 (212)
T 1nfd_E 14 GETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCLSSYGDN 93 (212)
T ss_dssp TSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEEEEETTT
T ss_pred CCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEEEEcccC
Confidence 78999999998888889999994 33321 2344444555677999999999999999999997322
Q ss_pred ee---EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccc
Q psy12422 66 TD---ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNY 142 (356)
Q Consensus 66 ~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (356)
.. .....|.|...+
T Consensus 94 ~~~~~~~~~~l~V~~~~--------------------------------------------------------------- 110 (212)
T 1nfd_E 94 NDLVFGSGTQLTVLRGP--------------------------------------------------------------- 110 (212)
T ss_dssp TEEEECCCEEEEEECCC---------------------------------------------------------------
T ss_pred cccccCCceEEEEccCC---------------------------------------------------------------
Confidence 11 112334332110
Q ss_pred cccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCC-CC-Ce
Q psy12422 143 SSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGD-PE-PR 220 (356)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~-p~ 220 (356)
..+|.+...+....+.+|+.++|.|.+.|. |+ |.
T Consensus 111 --------------------------------------------~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~ 146 (212)
T 1nfd_E 111 --------------------------------------------KSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSAT 146 (212)
T ss_dssp --------------------------------------------CBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCE
T ss_pred --------------------------------------------CCCCEEEeeCCchHhccCCceEEEEEEEeeECCccE
Confidence 123333332222334579999999999887 54 78
Q ss_pred EEEEECCEEccCCCceeEEE--eCC---EEEEEEccCCCCCCeEEEEEEEcCCCceEE
Q psy12422 221 VSWTKNGQPLNSSNILDLKY--KNG---VASLQIQEVFPEDEGVYVCTATNSLGTAET 273 (356)
Q Consensus 221 i~W~~~g~~~~~~~~~~~~~--~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 273 (356)
|.|+++|..+.......... .++ .+.|.|.+++.+|+|.|+|.|.|..+....
T Consensus 147 v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (212)
T 1nfd_E 147 VTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVEK 204 (212)
T ss_dssp EEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCCC
T ss_pred EEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEEE
Confidence 99999999886542211000 011 246999999999999999999999876443
No 153
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.88 E-value=3.4e-22 Score=152.71 Aligned_cols=139 Identities=18% Similarity=0.286 Sum_probs=105.1
Q ss_pred CCceEEEEEeccCC-CCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKP-PPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p-~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.+.| .+.+.|||+|..+.... . .+.|.+++.+|+|.|+|.+.|.... ..+.|.|...
T Consensus 19 G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~-------~--~~~~~~~~~~d~G~Y~C~~~~~~~s--~~~~l~v~~~- 86 (170)
T 3ry4_A 19 EDSVTLTCQGARSPESDSIQWFHNGNLIPTHT-------Q--PSYRFKANNNDSGEYTCQTGQTSLS--DPVHLTVLFE- 86 (170)
T ss_dssp TCEEEEEEESCCCSSSSCEEEEETTEECTTCC-------S--SEEEEECCGGGCEEEEEEETTSBCC--CCEEEEEECC-
T ss_pred CCcEEEEEEecCCCCcceEEEEECCeEcccCc-------c--ceEEEecccccCeEEEEEEeCCCce--EeEEEEEECC-
Confidence 78999999998887 57899999999987532 1 4667889999999999999875332 3344544421
Q ss_pred cchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeee
Q psy12422 80 ESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRR 159 (356)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (356)
T Consensus 87 -------------------------------------------------------------------------------- 86 (170)
T 3ry4_A 87 -------------------------------------------------------------------------------- 86 (170)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE-cCCCCCeEEEEECCEEccCCCceeE
Q psy12422 160 MNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV-KGDPEPRVSWTKNGQPLNSSNILDL 238 (356)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~~~~~~~~~~ 238 (356)
+.+.. .....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+...
T Consensus 87 ------------------------------~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~----- 130 (170)
T 3ry4_A 87 ------------------------------WLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS----- 130 (170)
T ss_dssp ------------------------------SEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE-----
T ss_pred ------------------------------ceEec-CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc-----
Confidence 11111 112357789999999999 55677899999999876421
Q ss_pred EEeCCEEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 239 KYKNGVASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
.....|.|.+++.+|+|.|+|.|.|..|.
T Consensus 131 ---~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 159 (170)
T 3ry4_A 131 ---HLDPTFSIPQANHSHSGDYHCTGNIGYTL 159 (170)
T ss_dssp ---SSCCEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ---CCCCeEEEEeccccCCEEEEEEEEeCcCc
Confidence 22347999999999999999999999986
No 154
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.88 E-value=9.6e-22 Score=165.80 Aligned_cols=225 Identities=12% Similarity=0.119 Sum_probs=126.6
Q ss_pred ccccccCccceeeeccc-CCceeeecccccccCCccccCCCCceE---EEEeeccccccccccccCCCccceeeeeeccc
Q psy12422 89 HNFLYSGDRKYIEKHIR-PAPAIITTRQEIKSSYSSHTDDTGRTT---TQMSTLSSNYSSSTNNATSPSKKITRRMNSIL 164 (356)
Q Consensus 89 ~~~~~~g~~~~l~c~~~-p~p~i~w~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (356)
...+.+|+.+.|.|.+. ..+.+.|++++................ .....+.|.|.|.+.+....
T Consensus 32 ~~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~------------ 99 (316)
T 3vh8_G 32 SAVVPRGGHVTLRCHYRHRFNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSP------------ 99 (316)
T ss_dssp CSEEETTSCEEEEEEBTTBCCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSS------------
T ss_pred CCccCCCCCEEEEEEccCCCceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCC------------
Confidence 35678999999999998 456799999877653321111111111 11333445555543221110
Q ss_pred cCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEE-eCC
Q psy12422 165 DTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKY-KNG 243 (356)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~-~~~ 243 (356)
......+....+.+.. ...+|.+...+... +.+|+.++|.|.+. .+++.+.|+++|..+.......... ...
T Consensus 100 ---~~~~~~s~~~~l~V~~--~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~ 172 (316)
T 3vh8_G 100 ---TGWSAPSNPVVIMVTG--NHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVS 172 (316)
T ss_dssp ---SSBCCCCCCEEEEEEC--SSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEE
T ss_pred ---cceecCCCcEEEEEec--CCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCc
Confidence 0111122333343321 13456666655544 88999999999995 4667899999998775332111111 123
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcCCCc-------eEEEEEEec-CCCCcc--------c----------------eeEEe
Q psy12422 244 VASLQIQEVFPEDEGVYVCTATNSLGT-------AETKCKLTP-LNSSNI--------L----------------DLKYK 291 (356)
Q Consensus 244 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~-------~~~~~~l~p-~~~~~~--------~----------------~~~~~ 291 (356)
...|.|.+++.+|+|.|+|.|.|..|. ....+.+.. ...+.+ . .+.|.
T Consensus 173 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~~~~W~ 252 (316)
T 3vh8_G 173 KANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRSSYDMYHLS 252 (316)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEESSCCSEEEEE
T ss_pred eEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECCCCCcEEEEE
Confidence 468999999999999999999999873 223333321 011110 0 33443
Q ss_pred C------------------CeEEEEEecCCCCCCeEEEEEEEcCCcc-----eEEEEEEEEEecCC
Q psy12422 292 N------------------GVASLQIQEVFPEDEGVYVCTATNSLGT-----AETKCKLTVRSTPA 334 (356)
Q Consensus 292 ~------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~~~p~ 334 (356)
+ ....|.|.+++ |+|.|+|+|+|..+. .+..+.|.|.++|.
T Consensus 253 k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p~ 316 (316)
T 3vh8_G 253 REGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNPS 316 (316)
T ss_dssp ETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC-------
T ss_pred ECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCCC
Confidence 2 12689999999 999999999998763 45578888888763
No 155
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.88 E-value=1.2e-21 Score=152.74 Aligned_cols=140 Identities=29% Similarity=0.540 Sum_probs=110.1
Q ss_pred CCeecccC--CceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 189 PPQFANKL--TDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 189 ~p~~~~~~--~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
||.+...+ .+..+.+|+.+.|.|.+.+.|.+.+.|+++|..+....++... .....|.|.+++.+|+|.|+|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEE--TTTTEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEe--CCeeEEEEecCChhcCcEEEEEEEc
Confidence 56665544 3578899999999999999999999999999999877655443 3334899999999999999999999
Q ss_pred CCCceEEEEEEecCCCCccc-------------------------eeEEeC------------------------CeEEE
Q psy12422 267 SLGTAETKCKLTPLNSSNIL-------------------------DLKYKN------------------------GVASL 297 (356)
Q Consensus 267 ~~g~~~~~~~l~p~~~~~~~-------------------------~~~~~~------------------------~~~~L 297 (356)
..|.....+.+.....+.+. .+.|.. ....|
T Consensus 80 ~~~~~~~~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 159 (192)
T 2va4_A 80 KAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSL 159 (192)
T ss_dssp TTEEEEEEEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEE
T ss_pred cccccceEEEEEEEccCcccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEE
Confidence 99887766665521111110 344432 13689
Q ss_pred EEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy12422 298 QIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 330 (356)
Q Consensus 298 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 330 (356)
.|.+++.+|+|.|+|.|.|..|..+..+.|.|+
T Consensus 160 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 160 HIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 999999999999999999999999999999885
No 156
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.88 E-value=1.3e-21 Score=155.17 Aligned_cols=148 Identities=31% Similarity=0.564 Sum_probs=115.4
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEe-CCEEEEEEccC-CCCCCeEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYK-NGVASLQIQEV-FPEDEGVYVCTA 264 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~-~~~~~L~i~~v-~~~d~G~Y~C~a 264 (356)
..+|.|...+.+..+.+|+.+.|.|.+.|+|.+.+.|+++|..+........... .....|.|.++ +.+|+|.|+|.|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 4568888888889999999999999999999999999999999876544333332 34678999999 599999999999
Q ss_pred EcCCCceEEEEEEecCCC-------Cccc--------------------------eeEEeC-------------------
Q psy12422 265 TNSLGTAETKCKLTPLNS-------SNIL--------------------------DLKYKN------------------- 292 (356)
Q Consensus 265 ~n~~g~~~~~~~l~p~~~-------~~~~--------------------------~~~~~~------------------- 292 (356)
.|..|.....+.|.+... +.+. .+.|..
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~ 163 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRS 163 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEE
T ss_pred EcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEec
Confidence 999998777666653211 1111 344432
Q ss_pred -CeEEEEEecCCCCCCeEEEEEEEcCCcceEE-EEEEEEEecCC
Q psy12422 293 -GVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLTVRSTPA 334 (356)
Q Consensus 293 -~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~ 334 (356)
....|.|.+++.+|+|.|+|.|.|..|...+ .+.|.|..++.
T Consensus 164 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~~ 207 (212)
T 2yd6_A 164 ESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTKH 207 (212)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred CCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEeccc
Confidence 2378999999999999999999999998865 78999988875
No 157
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.88 E-value=3.9e-22 Score=158.65 Aligned_cols=169 Identities=15% Similarity=0.188 Sum_probs=111.7
Q ss_pred CCceEEEEEe-ccCC-CCeeEEeeCC--EEcc-------------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeC
Q psy12422 1 MQNVIKVKVG-STKP-PPTVKWYKGN--RELS-------------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 63 (356)
Q Consensus 1 g~~v~l~C~~-~g~p-~~~v~W~k~g--~~l~-------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 63 (356)
|++|+|.|.+ .+.| .+.|.|||++ ..+. ..++......+..+|+|.+++.+|+|.|.|.+.|.
T Consensus 15 G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 94 (216)
T 2xzc_L 15 GQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDS 94 (216)
T ss_dssp TCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred CCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 7899999995 4443 5789999953 2221 12444444566779999999999999999999998
Q ss_pred Cc--eeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecccc
Q psy12422 64 HG--TDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSN 141 (356)
Q Consensus 64 ~g--~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (356)
.+ .......|.|...
T Consensus 95 ~~~~~~~~~~~l~V~~~--------------------------------------------------------------- 111 (216)
T 2xzc_L 95 SLNPVFGGGTKLEIKRT--------------------------------------------------------------- 111 (216)
T ss_dssp TSCEEEBCCEEEEECCC---------------------------------------------------------------
T ss_pred CCcceECCCEEEEEcCC---------------------------------------------------------------
Confidence 75 1122334444211
Q ss_pred ccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-CCCC-
Q psy12422 142 YSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG-DPEP- 219 (356)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p~p- 219 (356)
..+|.+...+......+|+.++|.|.+.| .|+|
T Consensus 112 ---------------------------------------------~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~ 146 (216)
T 2xzc_L 112 ---------------------------------------------VAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREA 146 (216)
T ss_dssp ---------------------------------------------CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCC
T ss_pred ---------------------------------------------CCCCceEEeCCChhhccCCcEEEEEEEEeEcCCce
Confidence 12233332221112335889999999987 5554
Q ss_pred eEEEEECCEEccCCCceeE--EE-eCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 220 RVSWTKNGQPLNSSNILDL--KY-KNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 220 ~i~W~~~g~~~~~~~~~~~--~~-~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
.|.|+++|..+........ .. .++ .+.|.|..+..+|+|.|+|.|.|..........+
T Consensus 147 ~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~i 211 (216)
T 2xzc_L 147 KVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF 211 (216)
T ss_dssp EEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEEE
T ss_pred EEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCceEEec
Confidence 8999999998865411110 11 111 2479999999999999999999998665544444
No 158
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.88 E-value=2.3e-21 Score=151.87 Aligned_cols=144 Identities=25% Similarity=0.419 Sum_probs=114.9
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC-ceeEE-EeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN-ILDLK-YKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~-~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+.... ++... ..++...|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 57888888888999999999999999999999999999999887543 33333 34566799999999999999999999
Q ss_pred cCCCceEEEEEEecCC-----CCc-------cc-------------------eeEEeC-----------------CeEEE
Q psy12422 266 NSLGTAETKCKLTPLN-----SSN-------IL-------------------DLKYKN-----------------GVASL 297 (356)
Q Consensus 266 n~~g~~~~~~~l~p~~-----~~~-------~~-------------------~~~~~~-----------------~~~~L 297 (356)
|..|.....+.|.... .+. +. .+.|.. ....|
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L 162 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEE
T ss_pred ECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEE
Confidence 9998877666665211 000 00 333432 34689
Q ss_pred EEec-CCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 298 QIQE-VFPEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 298 ~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
.|.+ ++.+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 163 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp ECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 9999 999999999999999999999999998863
No 159
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.88 E-value=3.5e-22 Score=158.58 Aligned_cols=167 Identities=17% Similarity=0.152 Sum_probs=114.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--EEc-------------ccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~~l-------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+.|.+.+.|||++ ... ...++......+..+|+|.+++.+|+|.|.|.|.|..+
T Consensus 16 G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 95 (213)
T 3r06_A 16 GDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYP 95 (213)
T ss_dssp TCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSS
T ss_pred CCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEecccCCc
Confidence 789999999999999999999932 111 02244444455677999999999999999999988754
Q ss_pred ee-EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccc
Q psy12422 66 TD-ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSS 144 (356)
Q Consensus 66 ~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (356)
.. .....|.|...
T Consensus 96 ~~~~~~~~l~V~~~------------------------------------------------------------------ 109 (213)
T 3r06_A 96 WTFGPGTKLEIKRA------------------------------------------------------------------ 109 (213)
T ss_dssp CEECCCEEEEECCC------------------------------------------------------------------
T ss_pred eEEcCCceEEEecc------------------------------------------------------------------
Confidence 22 22344444211
Q ss_pred cccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCC--CeEE
Q psy12422 145 STNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE--PRVS 222 (356)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~--p~i~ 222 (356)
..+|.+...+....+..|+.+.|.|.+.|.|+ +.+.
T Consensus 110 ------------------------------------------~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~ 147 (213)
T 3r06_A 110 ------------------------------------------DAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVK 147 (213)
T ss_dssp ------------------------------------------CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEE
T ss_pred ------------------------------------------CCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEE
Confidence 23344444333444567888999999987654 3799
Q ss_pred EEECCEEccCCC-ce-eEEE-eCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEEE
Q psy12422 223 WTKNGQPLNSSN-IL-DLKY-KNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETKC 275 (356)
Q Consensus 223 W~~~g~~~~~~~-~~-~~~~-~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 275 (356)
|+++|..+.... .. .... ..+ .+.|.|.....+|+|.|+|.|.|.........
T Consensus 148 W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~~~~ 207 (213)
T 3r06_A 148 WKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAAIVK 207 (213)
T ss_dssp EEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEE
T ss_pred EEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcceEE
Confidence 999999887532 11 0111 111 24688999999999999999999876544433
No 160
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.88 E-value=1e-21 Score=150.77 Aligned_cols=149 Identities=15% Similarity=0.255 Sum_probs=107.0
Q ss_pred CCceEEEEEec--cCCCCeeEEee--CCEEcc----------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCce
Q psy12422 1 MQNVIKVKVGS--TKPPPTVKWYK--GNRELS----------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGT 66 (356)
Q Consensus 1 g~~v~l~C~~~--g~p~~~v~W~k--~g~~l~----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~ 66 (356)
|++|+|.|... +.|.+.|.|+| ++..|. ...+.....++ +|+|.+++.+|+|.|+|.+.|..|.
T Consensus 14 G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng--sL~I~~v~~~DsG~Y~c~~~n~~g~ 91 (182)
T 1hnf_A 14 GQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG--TLKIKHLKTDDQDIYKVSIYDTKGK 91 (182)
T ss_dssp TSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS--CEEECSCCGGGCEEEEEEEEETTSC
T ss_pred CCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC--CEEECCCChhhCEEEEEEEEeCCCc
Confidence 78999999542 35677999999 988762 22233344556 7999999999999999999998876
Q ss_pred eE--EEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccc
Q psy12422 67 DE--TNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSS 144 (356)
Q Consensus 67 ~~--~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (356)
.. ..+.|.|..+
T Consensus 92 ~~~~~~~~L~V~~~------------------------------------------------------------------ 105 (182)
T 1hnf_A 92 NVLEKIFDLKIQER------------------------------------------------------------------ 105 (182)
T ss_dssp EEEEEEEEEEEECC------------------------------------------------------------------
T ss_pred eeEEEEEEEEEcCc------------------------------------------------------------------
Confidence 54 3455666532
Q ss_pred cccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEE
Q psy12422 145 STNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWT 224 (356)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~ 224 (356)
..+|.+.. .+..+.|.|.+.+.|.|.+.|+
T Consensus 106 ------------------------------------------~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~ 135 (182)
T 1hnf_A 106 ------------------------------------------VSKPKISW--------TCINTTLTCEVMNGTDPELNLY 135 (182)
T ss_dssp ------------------------------------------CCCCEEEE--------ETTTTEEEEECSSCSSCEEEEE
T ss_pred ------------------------------------------CCCCEEEE--------ccCcEEEEeEccCCCCCEEEEE
Confidence 11233221 1236899999999999999999
Q ss_pred ECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 225 KNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 225 ~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
++|..+ .. ... .|.+. ...+|+|.|+|.|.|.+|.......+.
T Consensus 136 ~~g~~l-~~-------~~~--~i~~~-~~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 136 QDGKHL-KL-------SQR--VITHK-WTTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp ESSCEE-EE-------ESS--CEEEE-CCSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred ECCEEC-CC-------CCc--EEEEe-cccCCCcEEEEEEEeCCCCcEEcceec
Confidence 999877 11 111 23333 257899999999999999888776653
No 161
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.88 E-value=4.8e-22 Score=158.45 Aligned_cols=170 Identities=18% Similarity=0.249 Sum_probs=110.4
Q ss_pred CCceEEEEEeccCC--CCeeEEeeC--CEEcc------------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKG--NRELS------------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~--g~~l~------------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++++|.|.+.|.| .+.|.|||+ |..+. ..++.... ..+..+|+|.+++.+|+|.|
T Consensus 15 G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 94 (219)
T 1c1e_H 15 GETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNEDMATY 94 (219)
T ss_dssp TCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred CCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcccCEEE
Confidence 78999999998875 678999996 43221 12222222 23457999999999999999
Q ss_pred EEEEEeCCcee----EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceE
Q psy12422 57 KCVATNKHGTD----ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTT 132 (356)
Q Consensus 57 ~C~a~n~~g~~----~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~ 132 (356)
.|.+.|..+.. ...+.|.|....
T Consensus 95 ~C~~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------------------------- 121 (219)
T 1c1e_H 95 FCARGTTIVRAMDYWGQGTSLTVSSAK----------------------------------------------------- 121 (219)
T ss_dssp EEEEEETTTTEEEEECCCEEEEECCCC-----------------------------------------------------
T ss_pred EEEEeccCcccceeecCceEEEEecCC-----------------------------------------------------
Confidence 99999976321 123444443210
Q ss_pred EEEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEE
Q psy12422 133 TQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAV 212 (356)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~ 212 (356)
..+|.+...+....+.+|+.++|.|.
T Consensus 122 ------------------------------------------------------~~~P~i~~~~~~~~~~~g~~v~L~C~ 147 (219)
T 1c1e_H 122 ------------------------------------------------------TTPPSVYPLAPGSAAQTNSMVTLGCL 147 (219)
T ss_dssp ------------------------------------------------------CBCCEEEEECCCSSSCCSSEEEEEEE
T ss_pred ------------------------------------------------------CCCCeEEEecCccccccCCeEEEEEE
Confidence 11233322222224568999999999
Q ss_pred EcC-CCCC-eEEEEECCEEccCCCceeEEEeCC---EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 213 VKG-DPEP-RVSWTKNGQPLNSSNILDLKYKNG---VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 213 ~~g-~p~p-~i~W~~~g~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
+.| +|.| .|.|+++|..+...........+. .+.|.|.... .|.|.|+|.|.|..+.......+.
T Consensus 148 ~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~-~d~g~Y~C~a~n~~~~~~~~~~i~ 217 (219)
T 1c1e_H 148 VKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSP-RPSETVTCNVAHPASSTKVDKKIV 217 (219)
T ss_dssp EEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESSS-TTTSCCEEEEEEGGGTEEEEEECC
T ss_pred cccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEeccc-CCCCEEEEEEEeCCCCccEEEecC
Confidence 988 8998 999999987643111000011111 2468884444 466999999999999877766654
No 162
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.88 E-value=3e-22 Score=171.30 Aligned_cols=133 Identities=17% Similarity=0.239 Sum_probs=83.6
Q ss_pred CCceeecCCCeEEEEEEE-----cCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC-C
Q psy12422 196 LTDKTIDDGQCLDLSAVV-----KGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL-G 269 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~-----~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~-g 269 (356)
+....+.+|+.+.|.|.+ .|.|.|.+.|+++|..+..... +...+. .|.|.+++.+|+|.|+|.|.|.. |
T Consensus 127 ~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~--~~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~~g 202 (349)
T 4dep_C 127 PVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNN--VIPEGM--NLSFLIALISNNGNYTCVVTYPENG 202 (349)
T ss_dssp CEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSS--EEEETT--EEEEESCCGGGCEEEEEEEEEEETT
T ss_pred CcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccc--eeecCC--EEEEeeeeecCCcEEEEEEEEeeCC
Confidence 345678899999999985 7789999999999998865432 333343 79999999999999999999987 4
Q ss_pred ce---EEEEEEecCC------CCcc--------------------------------ceeEEeCC---------------
Q psy12422 270 TA---ETKCKLTPLN------SSNI--------------------------------LDLKYKNG--------------- 293 (356)
Q Consensus 270 ~~---~~~~~l~p~~------~~~~--------------------------------~~~~~~~~--------------- 293 (356)
.. ...+.+.... ++.+ ..+.|..+
T Consensus 203 ~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~ 282 (349)
T 4dep_C 203 RTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINE 282 (349)
T ss_dssp EEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCE
T ss_pred EEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCcccccc
Confidence 43 3444443211 1111 03445321
Q ss_pred ------------eEEEEEecCCCCCC-eEEEEEEEcCCcceEEEEEEEEEec
Q psy12422 294 ------------VASLQIQEVFPEDE-GVYVCTATNSLGTAETKCKLTVRST 332 (356)
Q Consensus 294 ------------~~~L~i~~v~~~d~-G~Y~C~a~n~~g~~~~~~~l~V~~~ 332 (356)
.+.|.|.+++.+|+ |.|+|.|.|..|..+..+.|.|+.+
T Consensus 283 ~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~~ 334 (349)
T 4dep_C 283 SISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVP 334 (349)
T ss_dssp EEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC------
T ss_pred ceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeecC
Confidence 23399999999999 9999999999999999999999763
No 163
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.88 E-value=3.4e-22 Score=166.59 Aligned_cols=215 Identities=14% Similarity=0.140 Sum_probs=131.7
Q ss_pred ccccccCccceeeecccCCceeeecccccccCCccccCCCCceEE----EEeeccccccccccccCCCccceeeeeeccc
Q psy12422 89 HNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTT----QMSTLSSNYSSSTNNATSPSKKITRRMNSIL 164 (356)
Q Consensus 89 ~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (356)
...+.+|+.+.|.|.+... +.|++......... ........ ....+.|.|.|...+...
T Consensus 13 ~~~v~~G~~v~L~C~~~~~--v~W~~~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~------------- 75 (292)
T 4dkd_C 13 ELVVKPGATVTLRCVGNGS--VEWDGPPSPHWTLY--SDGSSSILSTNNATFQNTGTYRCTEPGDPL------------- 75 (292)
T ss_dssp SCEECTTCCEEEEEECSSC--CCBCCCCCSSCEEC--CBTTEEEEEESSCCGGGCSCEEECCCC----------------
T ss_pred eEEEcCCCcEEEEEcCCCc--eEEccCCCCceEEe--ccCceEEEEEcccccccCEEEEEEEccCCC-------------
Confidence 4467899999999999874 99996543221110 00000111 123344555555432211
Q ss_pred cCCCCCcccccceeeecCCCCCCCCCe-ecccCCceeecCCCeEEEEEEEcCCCC--CeEEEEEC-CEEccCCCceeEEE
Q psy12422 165 DTDSPSRSRSTTKELIMPPDTAMTPPQ-FANKLTDKTIDDGQCLDLSAVVKGDPE--PRVSWTKN-GQPLNSSNILDLKY 240 (356)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~v~~g~~~~l~C~~~g~p~--p~i~W~~~-g~~~~~~~~~~~~~ 240 (356)
.......+.+ ..+|. +...+....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+..........
T Consensus 76 -------~~~~~~~l~V-----~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~ 142 (292)
T 4dkd_C 76 -------GGSAAIHLYV-----KDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSP 142 (292)
T ss_dssp --------CCEEECCEE-----CCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCS
T ss_pred -------CcceEEEEEE-----cCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccC
Confidence 1122333444 22232 344556788999999999999987 54 78999996 55555444333222
Q ss_pred eCCEEEEEEccCCCCCCeEEEEEEEcCCCceEE-EEEEecCC----CCccc---------------------------ee
Q psy12422 241 KNGVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLTPLN----SSNIL---------------------------DL 288 (356)
Q Consensus 241 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~p~~----~~~~~---------------------------~~ 288 (356)
. ..|.|.+++.+|+|.|+|.|.|..+.... .+.+.... ++.+. .+
T Consensus 143 ~---~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~ 219 (292)
T 4dkd_C 143 W---HGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDV 219 (292)
T ss_dssp S---SCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEE
T ss_pred C---ceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEE
Confidence 2 24999999999999999999998775432 33333111 12111 23
Q ss_pred EEeC-------------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 289 KYKN-------------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 289 ~~~~-------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
.|.. ..+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|++.....
T Consensus 220 ~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~ 286 (292)
T 4dkd_C 220 FLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGNS 286 (292)
T ss_dssp ECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-------
T ss_pred EEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCCcc
Confidence 3322 12489999999999999999999999999999999999886643
No 164
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.88 E-value=1.6e-21 Score=157.78 Aligned_cols=162 Identities=17% Similarity=0.190 Sum_probs=111.3
Q ss_pred CCceEEEEEeccCC----CCeeEEeeC--CEEc---c----------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKP----PPTVKWYKG--NREL---S----------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVAT 61 (356)
Q Consensus 1 g~~v~l~C~~~g~p----~~~v~W~k~--g~~l---~----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 61 (356)
|++|+|.|.+.+.| .+.|.|||+ |..+ . ..++.....++..+|+|.+++.+|+|.|+|.+.
T Consensus 16 G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 95 (240)
T 1moe_A 16 GQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVATYYCQQT 95 (240)
T ss_dssp TSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred CCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEEEEEEEc
Confidence 78999999999988 789999995 2211 0 124444445566789999999999999999999
Q ss_pred eCCce-eEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccc
Q psy12422 62 NKHGT-DETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSS 140 (356)
Q Consensus 62 n~~g~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (356)
|..+. ....+.|.|...+..
T Consensus 96 n~~~~~~~~~~~l~V~~~~~~----------------------------------------------------------- 116 (240)
T 1moe_A 96 NEDPYTFGGGTKLEIKGGGSG----------------------------------------------------------- 116 (240)
T ss_dssp SSSSCCBCCCEEEEECCCSCC-----------------------------------------------------------
T ss_pred cCCceeecCCEEEEEecCCCC-----------------------------------------------------------
Confidence 87554 223345555432100
Q ss_pred cccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCC--
Q psy12422 141 NYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE-- 218 (356)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-- 218 (356)
..++.+...+....+.+|++++|.|.+.+.|.
T Consensus 117 ----------------------------------------------~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~ 150 (240)
T 1moe_A 117 ----------------------------------------------GGGEVQLQQSGAELVEPGASVKLSCTASGFNIKD 150 (240)
T ss_dssp ----------------------------------------------CCCCCEEEECCCEEECTTCCEEEEEEEESSCGGG
T ss_pred ----------------------------------------------CCceEEEeCCCceEEeCCCcEEEEEEEcCccCCC
Confidence 01122222344567889999999999999884
Q ss_pred CeEEEEEC--CEEcc-----------------CCCceeEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 219 PRVSWTKN--GQPLN-----------------SSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 219 p~i~W~~~--g~~~~-----------------~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
+.+.|+|+ |..+. ...++....+ ....+|.|.+++.+|+|.|.|.|.+.
T Consensus 151 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 151 TYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp SCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred CEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 58999995 32211 1123333332 44578999999999999999999853
No 165
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.87 E-value=3.5e-21 Score=159.45 Aligned_cols=171 Identities=14% Similarity=0.181 Sum_probs=114.5
Q ss_pred CCceEEEEEeccCC--CCeeEEeeCC--EEcc------------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKGN--RELS------------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~g--~~l~------------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.+.| .+.+.|||++ ..+. ..++.... ..+..+|+|.+++.+|+|.|
T Consensus 41 G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y 120 (282)
T 1qok_A 41 GTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSEDTAVY 120 (282)
T ss_dssp TCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChhhCEEE
Confidence 78999999998875 5789999953 2110 12333332 33567999999999999999
Q ss_pred EEEEEeCCce-----eEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCce
Q psy12422 57 KCVATNKHGT-----DETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRT 131 (356)
Q Consensus 57 ~C~a~n~~g~-----~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~ 131 (356)
.|.+.|..|. ....+.|.|...+.......
T Consensus 121 ~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~--------------------------------------------- 155 (282)
T 1qok_A 121 YCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGG--------------------------------------------- 155 (282)
T ss_dssp EEEEECSSSSCCCEEECCCEEEEEEC------------------------------------------------------
T ss_pred EEEeccCCCccceeeeCCCEEEEEecCCcccCCcc---------------------------------------------
Confidence 9999998651 11234555553311000000
Q ss_pred EEEEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEE
Q psy12422 132 TTQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSA 211 (356)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C 211 (356)
. .....++.+...+....+.+|++++|.|
T Consensus 156 -------------------------------------------~--------~~~~~~~~~~~~p~~~~v~~G~~v~L~C 184 (282)
T 1qok_A 156 -------------------------------------------S--------GGGGSENVLTQSPAIMSASPGEKVTITC 184 (282)
T ss_dssp ---------------------------------------------------------CCCEEEECSEEEECTTCCEEEEE
T ss_pred -------------------------------------------C--------CCCccceEEecCCCEEEEcCCCcEEEEE
Confidence 0 0001234444455667899999999999
Q ss_pred EEcCCCCCeEEEEE--CCEEcc------------CCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 212 VVKGDPEPRVSWTK--NGQPLN------------SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 212 ~~~g~p~p~i~W~~--~g~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
.+.+.| +.+.|+| +|..+. ...++.........+|+|.+++.+|+|.|.|.|.|..
T Consensus 185 ~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 254 (282)
T 1qok_A 185 SASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSY 254 (282)
T ss_dssp EESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred EecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCC
Confidence 999999 8999999 555431 1234444445567789999999999999999999854
No 166
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.87 E-value=3.2e-22 Score=163.31 Aligned_cols=168 Identities=15% Similarity=0.140 Sum_probs=112.6
Q ss_pred CCceEEEEEeccCC-----CCeeEEeeC--CEEc-----------c--cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEE
Q psy12422 1 MQNVIKVKVGSTKP-----PPTVKWYKG--NREL-----------S--KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 60 (356)
Q Consensus 1 g~~v~l~C~~~g~p-----~~~v~W~k~--g~~l-----------~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 60 (356)
|++++|.|.+.+.| .+.|.|||+ |..+ . ..++......+..+|+|.+++.+|+|.|+|.|
T Consensus 53 G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 132 (254)
T 2c1o_A 53 GQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQ 132 (254)
T ss_dssp TSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEE
Confidence 78999999999888 489999984 3322 1 13444445566779999999999999999999
Q ss_pred EeCCceeE-EEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecc
Q psy12422 61 TNKHGTDE-TNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLS 139 (356)
Q Consensus 61 ~n~~g~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (356)
.|..+... ....|.|...
T Consensus 133 ~n~~~~~~~~~~~l~V~~~------------------------------------------------------------- 151 (254)
T 2c1o_A 133 GSHFPPTFGAGTKLELKRA------------------------------------------------------------- 151 (254)
T ss_dssp CSSSSCEEBCCEEEEECCC-------------------------------------------------------------
T ss_pred EcCcceEecCCEEEEECCC-------------------------------------------------------------
Confidence 98754322 1234444311
Q ss_pred ccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCC-CC
Q psy12422 140 SNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGD-PE 218 (356)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~ 218 (356)
..+|.+...+......+|+.++|.|.+.|. |+
T Consensus 152 -----------------------------------------------~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~ 184 (254)
T 2c1o_A 152 -----------------------------------------------DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPK 184 (254)
T ss_dssp -----------------------------------------------CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSS
T ss_pred -----------------------------------------------CCCCeeEeecCChhhccCCcEEEEEEEecccCC
Confidence 122333332222223457899999999884 44
Q ss_pred -CeEEEEECCEEccCCC-c-eeEEEe-C----CEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 219 -PRVSWTKNGQPLNSSN-I-LDLKYK-N----GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 219 -p~i~W~~~g~~~~~~~-~-~~~~~~-~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
+.+.|+++|..+.... . ...... + ..+.|.|.++..+|+|.|+|.|.|..........
T Consensus 185 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 250 (254)
T 2c1o_A 185 DINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKS 250 (254)
T ss_dssp CCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCEEEE
T ss_pred CcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCCcceEe
Confidence 4599999998876541 1 110001 1 1358999999999999999999999876444333
No 167
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.87 E-value=1.4e-21 Score=157.77 Aligned_cols=170 Identities=16% Similarity=0.226 Sum_probs=116.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--EE-----------cc--cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--RE-----------LS--KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~~-----------l~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+.|.+.+.|||++ .. .. ..++.....++..+|+|.+++.+|+|.|+|.+.|..+
T Consensus 39 G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 118 (237)
T 3sob_L 39 GDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTP 118 (237)
T ss_dssp TCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEeeccCCc
Confidence 789999999999999999999932 11 11 1344455556777999999999999999999988764
Q ss_pred ee-EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccc
Q psy12422 66 TD-ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSS 144 (356)
Q Consensus 66 ~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (356)
.. .....|.|...
T Consensus 119 ~~~~~~~~l~V~~~------------------------------------------------------------------ 132 (237)
T 3sob_L 119 PTFGQGTKVEIKRT------------------------------------------------------------------ 132 (237)
T ss_dssp CEECCCEEEEEECC------------------------------------------------------------------
T ss_pred eEEcCcEEEEEecC------------------------------------------------------------------
Confidence 32 22234444321
Q ss_pred cccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-CC-CCeEE
Q psy12422 145 STNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG-DP-EPRVS 222 (356)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p-~p~i~ 222 (356)
..+|.+...+....+.+|+.++|.|.+.+ .| .+.+.
T Consensus 133 ------------------------------------------~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~ 170 (237)
T 3sob_L 133 ------------------------------------------VAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQ 170 (237)
T ss_dssp ------------------------------------------CBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEE
T ss_pred ------------------------------------------CCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEE
Confidence 22344433333333456889999999987 45 58899
Q ss_pred EEECCEEccCCC-ce-eEEE-eCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 223 WTKNGQPLNSSN-IL-DLKY-KNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 223 W~~~g~~~~~~~-~~-~~~~-~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
|+++|..+.... .. .... .++ .+.|.|.....+|+|.|+|+|.|.......+..+.
T Consensus 171 W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~ 233 (237)
T 3sob_L 171 WKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN 233 (237)
T ss_dssp EEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEEEE
T ss_pred EEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeeeee
Confidence 999999887532 10 0000 111 35799999999999999999999987655544443
No 168
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.87 E-value=2.8e-22 Score=161.51 Aligned_cols=168 Identities=18% Similarity=0.203 Sum_probs=110.8
Q ss_pred CCceEEEEEeccCCC-C-eeEEeeC--CEEc-------------ccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeC
Q psy12422 1 MQNVIKVKVGSTKPP-P-TVKWYKG--NREL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 63 (356)
Q Consensus 1 g~~v~l~C~~~g~p~-~-~v~W~k~--g~~l-------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 63 (356)
|++|+|.|.+.+.|. + .|.|||+ |..+ ...++.....++..+|+|.+++.+|+|.|.|.+.|.
T Consensus 34 G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 113 (234)
T 2j6e_L 34 GQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCATWDD 113 (234)
T ss_dssp TCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEEEEEEET
T ss_pred CCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEEEEEEcC
Confidence 789999999987543 4 6999996 3222 012344444556679999999999999999999998
Q ss_pred Ccee---EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccc
Q psy12422 64 HGTD---ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSS 140 (356)
Q Consensus 64 ~g~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (356)
.+.. ...+.|.|...
T Consensus 114 ~~~~~~~~~~~~l~V~~~-------------------------------------------------------------- 131 (234)
T 2j6e_L 114 SLSAVIFGGGTKLTVLGQ-------------------------------------------------------------- 131 (234)
T ss_dssp TTTEEEECCCBCCCBCCC--------------------------------------------------------------
T ss_pred CcceeEecCCEEEEEecC--------------------------------------------------------------
Confidence 7621 11111111100
Q ss_pred cccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCC--
Q psy12422 141 NYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE-- 218 (356)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-- 218 (356)
...+|.+...+....+.+|+.++|.|.+.|.++
T Consensus 132 ---------------------------------------------~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~ 166 (234)
T 2j6e_L 132 ---------------------------------------------PKAAPSVTLFPPSSEELQANKATLVCLISDFFPGA 166 (234)
T ss_dssp ---------------------------------------------CCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCC
T ss_pred ---------------------------------------------CCCCCcccccCCChhHhcCCceEEEEEEEEEcCCc
Confidence 012344433222223446889999999988644
Q ss_pred CeEEEEECCEEccCCCceeE-EE-eC----CEEEEEEccCCCCCCeEEEEEEEcCCCceEEEE
Q psy12422 219 PRVSWTKNGQPLNSSNILDL-KY-KN----GVASLQIQEVFPEDEGVYVCTATNSLGTAETKC 275 (356)
Q Consensus 219 p~i~W~~~g~~~~~~~~~~~-~~-~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 275 (356)
+.|.|++||..+........ .. .+ ..+.|.|.++..+|+|.|+|.|.|..+....++
T Consensus 167 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 167 VTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp CEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred eEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 38999999998865421100 00 11 125799999999999999999999988765544
No 169
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.87 E-value=1.9e-21 Score=157.09 Aligned_cols=74 Identities=18% Similarity=0.290 Sum_probs=55.6
Q ss_pred cCCceeecCCCeEEEEEEEcCCCCCeEEEEECCE--E---c---------cCCCceeEEE--eCCEEEEEEccCCCCCCe
Q psy12422 195 KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQ--P---L---------NSSNILDLKY--KNGVASLQIQEVFPEDEG 258 (356)
Q Consensus 195 ~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~--~---~---------~~~~~~~~~~--~~~~~~L~i~~v~~~d~G 258 (356)
.+....+.+|++++|.|.+.+.|.|.+.|+|++. . + ....++.... .....+|.|.+++.+|+|
T Consensus 133 ~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G 212 (238)
T 2p1y_A 133 SPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSA 212 (238)
T ss_dssp ECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCE
T ss_pred cCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCE
Confidence 3455678999999999999999999999999531 1 1 0122333321 234578999999999999
Q ss_pred EEEEEEEcCC
Q psy12422 259 VYVCTATNSL 268 (356)
Q Consensus 259 ~Y~C~a~n~~ 268 (356)
.|.|.|.|..
T Consensus 213 ~Y~C~a~n~~ 222 (238)
T 2p1y_A 213 TYFCAAIDTN 222 (238)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEeeCC
Confidence 9999999984
No 170
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.87 E-value=1.7e-21 Score=154.66 Aligned_cols=71 Identities=18% Similarity=0.290 Sum_probs=52.2
Q ss_pred ecCCCeEEEEEEEcCC----CCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCc--eEEE
Q psy12422 201 IDDGQCLDLSAVVKGD----PEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT--AETK 274 (356)
Q Consensus 201 v~~g~~~~l~C~~~g~----p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~--~~~~ 274 (356)
+.+|+.++|.|.+.+. |.|.+.|++++..+.... ....+.|.|..+..+|+|.|+|.|.|..+. ....
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~~------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~ 208 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPE------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERT 208 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCSS------CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEE
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCCC------ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEE
Confidence 5689999999999764 889999999886543211 122348999999999999999999998754 4444
Q ss_pred EEE
Q psy12422 275 CKL 277 (356)
Q Consensus 275 ~~l 277 (356)
+.|
T Consensus 209 v~l 211 (214)
T 2zg1_A 209 VQL 211 (214)
T ss_dssp EEC
T ss_pred EEE
Confidence 444
No 171
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.87 E-value=2.4e-21 Score=157.66 Aligned_cols=174 Identities=17% Similarity=0.184 Sum_probs=110.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC-----EEc----------ccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN-----REL----------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g-----~~l----------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+.|.+.+.|||+. ..+ ...++.....++..+|+|.+++.+|+|.|.|.+.|..+
T Consensus 19 G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~ 98 (250)
T 3esu_F 19 GDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNTLP 98 (250)
T ss_dssp TCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEEEEeeCCC
Confidence 789999999999999999999942 111 02344444556677999999999999999999998755
Q ss_pred ee-EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccc
Q psy12422 66 TD-ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSS 144 (356)
Q Consensus 66 ~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (356)
.. .....|.|...+....... ...
T Consensus 99 ~~~~~~~~l~V~~~~~~~~~~~----~~~--------------------------------------------------- 123 (250)
T 3esu_F 99 WTFGGGTKLEIRRGGGGSGGGG----SGG--------------------------------------------------- 123 (250)
T ss_dssp CEECCCEEEEEC--------------------------------------------------------------------
T ss_pred ceECCCEEEEEECCCCcccccc----ccc---------------------------------------------------
Confidence 43 2334565553211000000 000
Q ss_pred cccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCC--CCeEE
Q psy12422 145 STNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDP--EPRVS 222 (356)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p--~p~i~ 222 (356)
. .. ....++.+...+....+.+|++++|.|.+.+.| .+.+.
T Consensus 124 --------------------------~---~~--------~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 166 (250)
T 3esu_F 124 --------------------------G---GS--------GGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMN 166 (250)
T ss_dssp ------------------------------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEE
T ss_pred --------------------------c---cc--------cCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEE
Confidence 0 00 001112222333456789999999999999877 78899
Q ss_pred EEEC--CEEccC-----------------CCceeEEEe--CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 223 WTKN--GQPLNS-----------------SNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 223 W~~~--g~~~~~-----------------~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
|+++ +..+.. ..++....+ ....+|.|.+++.+|+|.|.|.|.|
T Consensus 167 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 167 WVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 9996 432211 123333322 4456899999999999999999997
No 172
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.87 E-value=4.4e-21 Score=158.37 Aligned_cols=171 Identities=18% Similarity=0.208 Sum_probs=111.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCE-----Ecc----------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNR-----ELS----------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~-----~l~----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+.|.+.|.|||++. .+. ..++.....++..+|+|.+++.+|+|.|.|.+.|..+
T Consensus 27 G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 106 (276)
T 3auv_A 27 GDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTP 106 (276)
T ss_dssp TCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEEEecCCc
Confidence 7899999999999999999999541 121 1244444455677999999999999999999998754
Q ss_pred e-eEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccc
Q psy12422 66 T-DETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSS 144 (356)
Q Consensus 66 ~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (356)
. ....+.|.|...+.....
T Consensus 107 ~~~~~~~~l~V~~~~~~~~~------------------------------------------------------------ 126 (276)
T 3auv_A 107 PTFGCGTKVEIKGGGGGSIE------------------------------------------------------------ 126 (276)
T ss_dssp CCCCCCEEEEC---------------------------------------------------------------------
T ss_pred ccccCCEEEEEecCCCcccc------------------------------------------------------------
Confidence 3 222344555432100000
Q ss_pred cccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCC--CCeEE
Q psy12422 145 STNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDP--EPRVS 222 (356)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p--~p~i~ 222 (356)
. +. ....++.+...+....+.+|++++|.|.+.+.| .+.+.
T Consensus 127 -------------------------------~--~~----~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~ 169 (276)
T 3auv_A 127 -------------------------------G--RS----GGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIH 169 (276)
T ss_dssp ---------------------------------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred -------------------------------c--cc----cccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEE
Confidence 0 00 001112222233566889999999999999887 48899
Q ss_pred EEECC--EEc-----------------cCCCceeEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 223 WTKNG--QPL-----------------NSSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 223 W~~~g--~~~-----------------~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
|+|++ ..+ ....++....+ ....+|.|.+++.+|+|.|.|.|.|..
T Consensus 170 W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 236 (276)
T 3auv_A 170 WVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFF 236 (276)
T ss_dssp EEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred EEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCc
Confidence 99953 111 01233443332 345689999999999999999999984
No 173
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.87 E-value=2.2e-21 Score=155.01 Aligned_cols=77 Identities=16% Similarity=0.319 Sum_probs=57.2
Q ss_pred eecCCCeEEEEEEEcCC-CCC-eEEEEECCEEccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEE
Q psy12422 200 TIDDGQCLDLSAVVKGD-PEP-RVSWTKNGQPLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAET 273 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g~-p~p-~i~W~~~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 273 (356)
.+.+|+.++|.|.+.|. |.| .|.|+++|..+.... .......+ .+.|.|.++..+| |.|+|.|.|..|....
T Consensus 138 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~ 215 (222)
T 1q9r_B 138 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT-FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 215 (222)
T ss_dssp CCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE-EEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred cccCCCcEEEEEEEccEECCCCEEEEecCCeEcceEe-ccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcE
Confidence 35679999999999885 888 999999987654211 11111122 2468999999999 9999999999998776
Q ss_pred EEEEe
Q psy12422 274 KCKLT 278 (356)
Q Consensus 274 ~~~l~ 278 (356)
...+.
T Consensus 216 ~~~i~ 220 (222)
T 1q9r_B 216 DKKIV 220 (222)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 66554
No 174
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.87 E-value=6.5e-21 Score=155.65 Aligned_cols=174 Identities=17% Similarity=0.153 Sum_probs=115.6
Q ss_pred CCceEEEEEeccCC--CCeeEEeeC--CEE---c---------------ccCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKG--NRE---L---------------SKRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~--g~~---l---------------~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.+.| .+.+.|||. +.. + ...++.+.. ..+..+|+|.+++.+|+|.|
T Consensus 17 G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 96 (256)
T 3umt_A 17 GASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSEDSAVY 96 (256)
T ss_dssp TCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred CCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcccCEEE
Confidence 78999999998876 678999983 211 1 012333322 24566899999999999999
Q ss_pred EEEEEeC----CceeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceE
Q psy12422 57 KCVATNK----HGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTT 132 (356)
Q Consensus 57 ~C~a~n~----~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~ 132 (356)
.|.+.|. .+.....+.|.|...+......
T Consensus 97 ~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~----------------------------------------------- 129 (256)
T 3umt_A 97 YCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGG----------------------------------------------- 129 (256)
T ss_dssp EEEECCSTTCCSCEECCCEEEEECC-------------------------------------------------------
T ss_pred EEEEccCCCccccEECCCEEEEEcCCCccccCc-----------------------------------------------
Confidence 9999887 3333344556664321000000
Q ss_pred EEEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEE
Q psy12422 133 TQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAV 212 (356)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~ 212 (356)
. .. .....+|.+...+....+.+|++++|.|.
T Consensus 130 -------------------------------------------~--~~---~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 161 (256)
T 3umt_A 130 -------------------------------------------G--SG---GGGSTDIQLTQSPSSLSASLGERVSITCR 161 (256)
T ss_dssp -------------------------------------------------------CCCCEEEECSEEEECTTCCEEEEEE
T ss_pred -------------------------------------------c--cC---CCCccccEEEcCCCeEEEECCCCEEEEEE
Confidence 0 00 00012455555666778999999999999
Q ss_pred EcCCCCCeEEEEEC--CEEcc------------CCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 213 VKGDPEPRVSWTKN--GQPLN------------SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 213 ~~g~p~p~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
+.+.|.+.+.|+|+ +..+. ...++.........+|+|.+++.+|+|.|.|.|.|..+
T Consensus 162 ~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 232 (256)
T 3umt_A 162 ASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSP 232 (256)
T ss_dssp ESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSS
T ss_pred EecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCC
Confidence 99999899999983 22111 12344445556677899999999999999999998654
No 175
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.87 E-value=1e-20 Score=168.57 Aligned_cols=248 Identities=12% Similarity=0.121 Sum_probs=139.9
Q ss_pred CCceEEEEEeccC-CC-C-eeEEeeCCEEcccCCe-eEE-ecCCe----EEEEEeeCCCCCCeEEEEEEEeCCcee-EEE
Q psy12422 1 MQNVIKVKVGSTK-PP-P-TVKWYKGNRELSKRDY-SMS-YSDGV----VSMEIIDCKPEDSGEYKCVATNKHGTD-ETN 70 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~-~-~v~W~k~g~~l~~~~~-~~~-~~~~~----~~L~i~~~~~~D~G~Y~C~a~n~~g~~-~~~ 70 (356)
|+++.|.|.+.|. |. | .|+|+|++.......+ ... ..++. ..|+|..++.+|+|.|+|.|.|..+.. ...
T Consensus 141 g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 220 (475)
T 1iga_A 141 DGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVT 220 (475)
T ss_pred CCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeee
Confidence 6889999999887 65 4 9999999864321110 011 12332 258888888899999999999987642 223
Q ss_pred EEEEEeccc---------------cchhh-hh-hcccccccCccceeeecccC--C---ceeeecccccccCCcccc---
Q psy12422 71 CVVIVESEE---------------ESKEQ-QE-LAHNFLYSGDRKYIEKHIRP--A---PAIITTRQEIKSSYSSHT--- 125 (356)
Q Consensus 71 ~~l~v~~~~---------------~~~~~-~~-~~~~~~~~g~~~~l~c~~~p--~---p~i~w~~~~~~~~~~~~~--- 125 (356)
+.+.|...+ ..+.. .. .....+.+|+.+.|.|.+.. + +.+.| . +.........
T Consensus 221 v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~ 298 (475)
T 1iga_A 221 VPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPE 298 (475)
T ss_pred EecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCce
Confidence 333231100 01110 11 11122589999999999872 2 47999 3 3222211000
Q ss_pred -CCCCceE----EE----EeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccC
Q psy12422 126 -DDTGRTT----TQ----MSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKL 196 (356)
Q Consensus 126 -~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 196 (356)
...+... .. ...+.+.|.|.+.+..... .....+.+ .....+|.+...+
T Consensus 299 ~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~--------------------~~~~~v~~--~~~~~~P~v~~~~ 356 (475)
T 1iga_A 299 RDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKT--------------------PLTATLSK--SGNTFRPEVHLLP 356 (475)
T ss_pred ECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCC--------------------ceEEEeec--CCCCCCCeEEEEC
Confidence 0001000 00 1122344444443222111 11112211 1124556655443
Q ss_pred -CceeecCCCeEEEEEEEcCCCC--CeEEEEECCEEccCCCcee---EEE---eCC----EEEEEEccCCCCCCeEEEEE
Q psy12422 197 -TDKTIDDGQCLDLSAVVKGDPE--PRVSWTKNGQPLNSSNILD---LKY---KNG----VASLQIQEVFPEDEGVYVCT 263 (356)
Q Consensus 197 -~~~~v~~g~~~~l~C~~~g~p~--p~i~W~~~g~~~~~~~~~~---~~~---~~~----~~~L~i~~v~~~d~G~Y~C~ 263 (356)
....+.+|+.+.|.|.+.|+++ +.|.|+|||..+....... ... .++ .+.|.|.....+|.|.|+|.
T Consensus 357 ~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~ 436 (475)
T 1iga_A 357 PPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCM 436 (475)
T ss_pred CChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEE
Confidence 3334778999999999988643 4899999999887553111 111 111 24688888888899999999
Q ss_pred EEcCCCceE
Q psy12422 264 ATNSLGTAE 272 (356)
Q Consensus 264 a~n~~g~~~ 272 (356)
|.|......
T Consensus 437 a~n~~l~~~ 445 (475)
T 1iga_A 437 VGHEALPLA 445 (475)
T ss_pred EEcCCCCCc
Confidence 999876543
No 176
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.87 E-value=8.2e-22 Score=158.39 Aligned_cols=151 Identities=23% Similarity=0.435 Sum_probs=114.0
Q ss_pred CCCCeecccC----CceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee-EEEeCCEEEEEEccCCCCCCeEEE
Q psy12422 187 MTPPQFANKL----TDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD-LKYKNGVASLQIQEVFPEDEGVYV 261 (356)
Q Consensus 187 ~~~p~~~~~~----~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~ 261 (356)
..+|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|+++|..+....... .....+...|.|.+++.+|+|.|+
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEE
Confidence 4456665444 67889999999999999999999999999999987554321 122333348999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCC----CCcc--------c-------------------eeEEeC------------------
Q psy12422 262 CTATNSLGTAETKCKLTPLN----SSNI--------L-------------------DLKYKN------------------ 292 (356)
Q Consensus 262 C~a~n~~g~~~~~~~l~p~~----~~~~--------~-------------------~~~~~~------------------ 292 (356)
|.|.|..|.....+.+.... .+.+ . .+.|..
T Consensus 93 C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 172 (231)
T 3ojm_B 93 CVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLK 172 (231)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEE
T ss_pred EEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEe
Confidence 99999999877766665221 1100 0 344432
Q ss_pred ----------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCCC
Q psy12422 293 ----------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAANL 337 (356)
Q Consensus 293 ----------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 337 (356)
....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|..+.
T Consensus 173 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 173 VLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPG 227 (231)
T ss_dssp EEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC----
T ss_pred EecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCc
Confidence 123599999999999999999999999999999999999988664
No 177
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.87 E-value=5.5e-21 Score=156.08 Aligned_cols=81 Identities=20% Similarity=0.248 Sum_probs=61.6
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCCC-CeEEEEEC--CEEcc------------CCCceeEEEeCCEEEEEEccCC
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDPE-PRVSWTKN--GQPLN------------SSNILDLKYKNGVASLQIQEVF 253 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-p~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~i~~v~ 253 (356)
++.+...+....+.+|++++|.|.+.+.|. +.+.|+|. +..+. ...++.........+|.|.+++
T Consensus 149 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 228 (256)
T 3juy_B 149 EIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVE 228 (256)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eeEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCC
Confidence 344555566778999999999999998886 88999982 22221 1234445556667789999999
Q ss_pred CCCCeEEEEEEEcCCC
Q psy12422 254 PEDEGVYVCTATNSLG 269 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~g 269 (356)
.+|+|.|.|.|.|...
T Consensus 229 ~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 229 PEDFALYYCQVYGASS 244 (256)
T ss_dssp GGGCSEEEEEECCSSC
T ss_pred HhHCEEEEEEEeeCCC
Confidence 9999999999998644
No 178
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.87 E-value=1.6e-21 Score=148.61 Aligned_cols=147 Identities=15% Similarity=0.177 Sum_probs=104.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEccc---C--------CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSK---R--------DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET 69 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~---~--------~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 69 (356)
|++|+|.|.+.+ |.+.|.|+|++..+.. . +..........+|+|.+++.+|+|.|+|.+.|..| ..
T Consensus 10 G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~--~~ 86 (171)
T 1ccz_A 10 YGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITD--TM 86 (171)
T ss_dssp TCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCCS--CE
T ss_pred CCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCCC--cE
Confidence 899999999854 8899999999875431 0 00112211223899999999999999999998877 56
Q ss_pred EEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecccccccccccc
Q psy12422 70 NCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNA 149 (356)
Q Consensus 70 ~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (356)
.+.|.|..++
T Consensus 87 ~~~L~V~~~~---------------------------------------------------------------------- 96 (171)
T 1ccz_A 87 KFFLYVLEMV---------------------------------------------------------------------- 96 (171)
T ss_dssp EEEEEEECCC----------------------------------------------------------------------
T ss_pred EEEEEEECcC----------------------------------------------------------------------
Confidence 6777776431
Q ss_pred CCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEE
Q psy12422 150 TSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQP 229 (356)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~ 229 (356)
..|.+...... ..|.|.+.+.|.|.+.|+++|..
T Consensus 97 --------------------------------------~~p~i~~~~~~--------~~L~C~~~~~p~p~i~W~~~~~~ 130 (171)
T 1ccz_A 97 --------------------------------------SKPMIYWECSN--------ATLTCEVLEGTDVELKLYQGKEH 130 (171)
T ss_dssp --------------------------------------CCCEEEEETTT--------TEEEEECSSCSSCEEEEEETTEE
T ss_pred --------------------------------------CCCEEEEecCC--------cEEEEEeCCCCCcEEEEEECCEE
Confidence 11222211110 27899999999999999999988
Q ss_pred ccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 230 LNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 230 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
+...... .|.+. ...|+|.|+|.|.|..+.......+
T Consensus 131 l~~~~~~---------~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 131 LRSLRQK---------TMSYQ--WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp EEEESSS---------EEEEE--CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred CcCCcce---------EEEEe--ccCCCceEEEEEEcccCcccceeEE
Confidence 7633211 34443 3778999999999999988776655
No 179
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.87 E-value=5.1e-22 Score=161.82 Aligned_cols=169 Identities=15% Similarity=0.181 Sum_probs=113.2
Q ss_pred CCceEEEEEeccCC-----CCeeEEeeCC--EEc-----------c--cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEE
Q psy12422 1 MQNVIKVKVGSTKP-----PPTVKWYKGN--REL-----------S--KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 60 (356)
Q Consensus 1 g~~v~l~C~~~g~p-----~~~v~W~k~g--~~l-----------~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 60 (356)
|++|+|.|.+.+.| .+.|.|||++ ..+ . ..++.....++..+|+|.+++.+|+|.|.|.+
T Consensus 49 G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 128 (252)
T 3bkj_L 49 GEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQ 128 (252)
T ss_dssp TSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCEEEEEEE
Confidence 78999999999887 6899999954 111 0 12444444566779999999999999999999
Q ss_pred EeCCceeE-EEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecc
Q psy12422 61 TNKHGTDE-TNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLS 139 (356)
Q Consensus 61 ~n~~g~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (356)
.|..+... ....|.|...
T Consensus 129 ~~~~~~~~~~~~~l~V~~~------------------------------------------------------------- 147 (252)
T 3bkj_L 129 ASLVPLTFGAGTKLELKRA------------------------------------------------------------- 147 (252)
T ss_dssp CSBSSCEECCCEEEEECCC-------------------------------------------------------------
T ss_pred EcCCccEECCCEEEEEeCC-------------------------------------------------------------
Confidence 88754321 1234444321
Q ss_pred ccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-CCC
Q psy12422 140 SNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG-DPE 218 (356)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p~ 218 (356)
..+|.+...+....+.+|+.++|.|.+.| .|+
T Consensus 148 -----------------------------------------------~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~ 180 (252)
T 3bkj_L 148 -----------------------------------------------DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPK 180 (252)
T ss_dssp -----------------------------------------------CBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSS
T ss_pred -----------------------------------------------CcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCC
Confidence 12233333222222446899999999987 454
Q ss_pred C-eEEEEECCEEccCCCceeE--E-EeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 219 P-RVSWTKNGQPLNSSNILDL--K-YKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 219 p-~i~W~~~g~~~~~~~~~~~--~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
+ .|.|+++|..+........ . ..++ .+.|.|.++..+|+|.|+|.|.|..........+
T Consensus 181 ~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~p~~~~~ 247 (252)
T 3bkj_L 181 DINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 247 (252)
T ss_dssp CCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEE
T ss_pred CcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCCCeeEee
Confidence 4 7999999998765411100 0 0111 2469999999999999999999988765444444
No 180
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.86 E-value=2e-20 Score=156.82 Aligned_cols=150 Identities=25% Similarity=0.423 Sum_probs=120.8
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC-ceeEE-EeCCEEEEEEccCCCCCCeEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN-ILDLK-YKNGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~-~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
..+|.|...+.+..+.+|+++.|.|.+.|.|.+.+.|+++|..+.... ++... ..++...|.|.+++.+|+|.|+|.|
T Consensus 2 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 357888888888999999999999999999999999999999887543 33332 3456679999999999999999999
Q ss_pred EcCCCceEEEEEEecCCCCc------------cc-------------------eeEEeC-----------------CeEE
Q psy12422 265 TNSLGTAETKCKLTPLNSSN------------IL-------------------DLKYKN-----------------GVAS 296 (356)
Q Consensus 265 ~n~~g~~~~~~~l~p~~~~~------------~~-------------------~~~~~~-----------------~~~~ 296 (356)
.|..|.....+.|.....+. +. .+.|.. ....
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (305)
T ss_dssp EETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEE
T ss_pred EcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceE
Confidence 99999877776666221110 00 334432 3468
Q ss_pred EEEec-CCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 297 LQIQE-VFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 297 L~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
|.|.+ +..+|+|.|+|.|.|..|..+..+.|.|..+|..+
T Consensus 162 l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p 202 (305)
T 2nzi_A 162 LVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPP 202 (305)
T ss_dssp EEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCC
T ss_pred EEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCC
Confidence 99999 99999999999999999999999999999888654
No 181
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.86 E-value=1e-21 Score=155.42 Aligned_cols=75 Identities=15% Similarity=0.271 Sum_probs=54.3
Q ss_pred eecCCCeEEEEEEEcCC-CCC-eEEEEECCEEccCCCceeEEEeC---CEEEEEEccCCCCCCeEEEEEEEcCCCceEEE
Q psy12422 200 TIDDGQCLDLSAVVKGD-PEP-RVSWTKNGQPLNSSNILDLKYKN---GVASLQIQEVFPEDEGVYVCTATNSLGTAETK 274 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g~-p~p-~i~W~~~g~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 274 (356)
.+.+|+.++|.|.+.|. |.| .+.|+++|..+...........+ ..+.|.|..+..+| |.|+|.|.|..|.....
T Consensus 129 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 129 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp SCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred ccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 45789999999999886 888 89999988754211110111111 13469999999877 99999999999987655
Q ss_pred E
Q psy12422 275 C 275 (356)
Q Consensus 275 ~ 275 (356)
.
T Consensus 208 ~ 208 (210)
T 3d9a_H 208 K 208 (210)
T ss_dssp E
T ss_pred c
Confidence 4
No 182
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.86 E-value=2.9e-21 Score=156.26 Aligned_cols=154 Identities=25% Similarity=0.451 Sum_probs=108.7
Q ss_pred CCCeeccc----CCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCce-eEEEeCCEEEEEEccCCCCCCeEEEE
Q psy12422 188 TPPQFANK----LTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNIL-DLKYKNGVASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 188 ~~p~~~~~----~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C 262 (356)
.+|.+..+ +....+.+|+++.|.|.+.|.|.+.+.|+++|..+...... ..........|.|.+++.+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 35555433 34678999999999999999999999999999998754332 12223334489999999999999999
Q ss_pred EEEcCCCceEEEEEEecCC----CCcc--------c-------------------eeEEeC-------------------
Q psy12422 263 TATNSLGTAETKCKLTPLN----SSNI--------L-------------------DLKYKN------------------- 292 (356)
Q Consensus 263 ~a~n~~g~~~~~~~l~p~~----~~~~--------~-------------------~~~~~~------------------- 292 (356)
.|.|..|.......+.... .+.+ . .+.|..
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 169 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTV 169 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeee
Confidence 9999999877766665211 0000 0 444432
Q ss_pred ----------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCCCCCCC
Q psy12422 293 ----------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAANLGKSP 341 (356)
Q Consensus 293 ----------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~ 341 (356)
....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|+++|.++.....
T Consensus 170 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~ve 228 (241)
T 3grw_A 170 LKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEELVE 228 (241)
T ss_dssp EEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC------------
T ss_pred eeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCcccee
Confidence 2456999999999999999999999999999999999999987655433
No 183
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.86 E-value=3e-21 Score=158.81 Aligned_cols=110 Identities=17% Similarity=0.266 Sum_probs=66.3
Q ss_pred ceeecCCCeEEEEEEE---cCCCCCeEEEEEC-CEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEE
Q psy12422 198 DKTIDDGQCLDLSAVV---KGDPEPRVSWTKN-GQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAET 273 (356)
Q Consensus 198 ~~~v~~g~~~~l~C~~---~g~p~p~i~W~~~-g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 273 (356)
...+.+|+.+.|.|.+ .+.|.|.+.|+++ +....... .+.+.+-. ..+ |.- ..+
T Consensus 127 ~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~-----------~~~~~~~~--~~~-~~~----~~~---- 184 (268)
T 3mj6_A 127 DLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEET-----------VLSYDSNM--RSG-KFQ----SLG---- 184 (268)
T ss_dssp EEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEE-----------EEEEETTS--SSC-EEE----CSS----
T ss_pred ccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCccee-----------EEEecCCC--Ccc-ccc----ccc----
Confidence 4568889999999999 6789999999994 43222111 11110000 000 000 000
Q ss_pred EEEEecCCCCccceeEE----eCCeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec-CCCCCC
Q psy12422 274 KCKLTPLNSSNILDLKY----KNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRST-PAANLG 338 (356)
Q Consensus 274 ~~~l~p~~~~~~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-p~~~~~ 338 (356)
.....+.+ ......|.|.+++.+|+|.|+|.|.|..|.....+.|.|... |.+...
T Consensus 185 ---------~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~ 245 (268)
T 3mj6_A 185 ---------RFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRTIS 245 (268)
T ss_dssp ---------TTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-------
T ss_pred ---------ccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCeeeeC
Confidence 00001111 125678999999999999999999999999999999999554 444333
No 184
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.86 E-value=4.2e-21 Score=151.05 Aligned_cols=138 Identities=18% Similarity=0.309 Sum_probs=103.3
Q ss_pred CeecccCCceeecCCCeEEEEEEEc-CCCCCeEEEEECCEEccCCCceeEEEeC--CEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVK-GDPEPRVSWTKNGQPLNSSNILDLKYKN--GVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~~g~~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
|.|.... +..+.+|+.+.|.|.+. +.|.|.++|++||..+..+.++.+..+. +...|.|.+++.+|+|.|+|.|.|
T Consensus 4 p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 4 PFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp --CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred CeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 4444433 56899999999999995 5799999999999999887777666654 667899999999999999999999
Q ss_pred CCCceEEEEEEe-------------------------c----------------------CCCCccceeEEeC-------
Q psy12422 267 SLGTAETKCKLT-------------------------P----------------------LNSSNILDLKYKN------- 292 (356)
Q Consensus 267 ~~g~~~~~~~l~-------------------------p----------------------~~~~~~~~~~~~~------- 292 (356)
|.+.....+. | ........+.|.+
T Consensus 83 --g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~ 160 (207)
T 3rbs_A 83 --GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISV 160 (207)
T ss_dssp --TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECC
T ss_pred --CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCC
Confidence 4433333221 1 0000001334432
Q ss_pred --------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy12422 293 --------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVR 330 (356)
Q Consensus 293 --------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 330 (356)
+...|.|.+++.+|+|.|+|.|.|..|..++.+.|.++
T Consensus 161 ~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 161 DEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp CCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 23469999999999999999999999999999998765
No 185
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.86 E-value=1.5e-21 Score=155.96 Aligned_cols=77 Identities=12% Similarity=0.066 Sum_probs=52.1
Q ss_pred ecCCCeEEEEEEE-cCCCCCeEEEEECCEEccCCCceeEEEeCC---EEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 201 IDDGQCLDLSAVV-KGDPEPRVSWTKNGQPLNSSNILDLKYKNG---VASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 201 v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
...++.+.+.|.+ .+.|++.+.|++++..+..........++. .+.|.|.+++.+|+|.|+|.|.|..+....+..
T Consensus 133 ~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~ 212 (225)
T 4fmk_A 133 IGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLP 212 (225)
T ss_dssp CSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEE
T ss_pred ecceeeeeeeeeecCCCCCCEEEEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEE
Confidence 3456666666665 678889999999876543322111111111 247999999999999999999999887654443
Q ss_pred E
Q psy12422 277 L 277 (356)
Q Consensus 277 l 277 (356)
+
T Consensus 213 v 213 (225)
T 4fmk_A 213 V 213 (225)
T ss_dssp E
T ss_pred E
Confidence 3
No 186
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.86 E-value=8.1e-21 Score=154.25 Aligned_cols=169 Identities=17% Similarity=0.202 Sum_probs=108.9
Q ss_pred CCceEEEEEeccCC-----CCeeEEeeCC--EE---cc----------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEE
Q psy12422 1 MQNVIKVKVGSTKP-----PPTVKWYKGN--RE---LS----------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 60 (356)
Q Consensus 1 g~~v~l~C~~~g~p-----~~~v~W~k~g--~~---l~----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 60 (356)
|++|+|.|.+.+.| .+.+.|||+. .. +. ..++.....++..+|+|.+++.+|+|.|.|.+
T Consensus 16 G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 95 (247)
T 1svz_A 16 GDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQ 95 (247)
T ss_dssp TCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCEEEEEEE
Confidence 78999999999888 6899999942 21 10 23444444556679999999999999999999
Q ss_pred EeCCcee-EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecc
Q psy12422 61 TNKHGTD-ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLS 139 (356)
Q Consensus 61 ~n~~g~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (356)
.|..+.. ...+.|.|...+.....
T Consensus 96 ~n~~~~~~~~~~~l~V~~~~~~~~~------------------------------------------------------- 120 (247)
T 1svz_A 96 GSHFPPTFGGGTKLEIKGGGGSGGG------------------------------------------------------- 120 (247)
T ss_dssp CSSSSCEECCCEEEEEC---------------------------------------------------------------
T ss_pred ccCCccEECCCEEEEEECCcccccc-------------------------------------------------------
Confidence 9875532 22355666532110000
Q ss_pred ccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCC--
Q psy12422 140 SNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDP-- 217 (356)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p-- 217 (356)
.. ....++.....+....+.+|++++|.|.+.+.|
T Consensus 121 -----------------------------~~--------------~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 157 (247)
T 1svz_A 121 -----------------------------GS--------------GGGGSEVQLQQSGPELKKPGETVKISCKATNYAFT 157 (247)
T ss_dssp --------------------------------------------------CCEEEECCCEEECTTCCEEEEEEEESSCGG
T ss_pred -----------------------------cc--------------ccccCceEEeCCCceeecCCCcEEEEEEEcCcccC
Confidence 00 000111111222234588999999999998875
Q ss_pred CCeEEEEECC--EEcc-----------------CCCceeEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 218 EPRVSWTKNG--QPLN-----------------SSNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 218 ~p~i~W~~~g--~~~~-----------------~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
.+.+.|+|++ ..+. ...++.... .....+|.|.+++.+|+|.|.|.|.|.
T Consensus 158 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 158 DYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp GSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 5689999953 2110 023333332 234579999999999999999999996
No 187
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.86 E-value=1.1e-21 Score=161.18 Aligned_cols=205 Identities=16% Similarity=0.238 Sum_probs=127.8
Q ss_pred cccccCccceeeeccc---CCc--eeeecccccccCCccccCCCCceEEEEe-----eccc--cccccccccCCCcccee
Q psy12422 90 NFLYSGDRKYIEKHIR---PAP--AIITTRQEIKSSYSSHTDDTGRTTTQMS-----TLSS--NYSSSTNNATSPSKKIT 157 (356)
Q Consensus 90 ~~~~~g~~~~l~c~~~---p~p--~i~w~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~ 157 (356)
..+.+|+.+.|.|.+. |.| .+.|++++..+........ ........ .+.+ .|.|...+....
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~-~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~----- 86 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGN-DSFSAKASVSVTAEDEGTQRLTCAVILGNQS----- 86 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECS-SEEEEEEEEEECGGGCEEEEEEEEEEETTEE-----
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCC-CeEEEEeecccccccCCcceEEEEEecCCCC-----
Confidence 4678999999999986 444 8999998876644211111 11111111 2222 255544322111
Q ss_pred eeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee
Q psy12422 158 RRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD 237 (356)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~ 237 (356)
......+.+.. ..+|.+. +....+.+|+.+.|.|.+. |.|.+.| +|..+...
T Consensus 87 ---------------~~~~~~l~V~~---~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~---- 138 (265)
T 2oz4_A 87 ---------------QETLQTVTIYS---FPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL---- 138 (265)
T ss_dssp ---------------EEEEEEEEEEC---CCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC----
T ss_pred ---------------cEEEEEEEEeC---CCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC----
Confidence 11223333310 2234444 3455688999999999998 8999999 77776322
Q ss_pred EEEeCCEEEEEEccCCCCCCeEEEEEEEcCC-CceE---EEEEEe----cCCC----C-ccc------------------
Q psy12422 238 LKYKNGVASLQIQEVFPEDEGVYVCTATNSL-GTAE---TKCKLT----PLNS----S-NIL------------------ 286 (356)
Q Consensus 238 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~-g~~~---~~~~l~----p~~~----~-~~~------------------ 286 (356)
+....|.|..+..+|+|.|+|.|.|.. |... ..+.|. |... + ...
T Consensus 139 ----~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~ 214 (265)
T 2oz4_A 139 ----GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPL 214 (265)
T ss_dssp ----SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESC
T ss_pred ----CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCC
Confidence 233578999999999999999998654 6654 444444 2110 1 000
Q ss_pred -eeEEeCCeE----EEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy12422 287 -DLKYKNGVA----SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRST 332 (356)
Q Consensus 287 -~~~~~~~~~----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 332 (356)
.+.|.++.. ...+..++.+|+|.|+|.|.|..|..+..+.|.|+++
T Consensus 215 p~i~W~~~~~~~~~~g~~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~p 265 (265)
T 2oz4_A 215 PELKCLKDGTFPLPIGESVTVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 265 (265)
T ss_dssp CEEEEEETTTEECCTTSCEECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CeEEEEECCcccCCCCcEEEeehhhCeEEEEEEECCCCcEEEEEEEEEecC
Confidence 455544221 1122358899999999999999999999999999865
No 188
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.86 E-value=2.5e-21 Score=151.01 Aligned_cols=145 Identities=30% Similarity=0.441 Sum_probs=108.9
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC-CceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS-NILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
..+|.+...+....+.+|+++.|.|.+.|+|.+.+.|+++|..+... .++.....+ ..|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG--QLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGG--TEEEESSCCGGGCEEEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCc--cEEEEcCCCcccCeEEEEEEE
Confidence 45677877788889999999999999999999999999999988753 333333233 379999999999999999999
Q ss_pred cCCCce-EEEEEEe----cCC---CCccc-------------------eeEEeC--------------CeEEEEEecCCC
Q psy12422 266 NSLGTA-ETKCKLT----PLN---SSNIL-------------------DLKYKN--------------GVASLQIQEVFP 304 (356)
Q Consensus 266 n~~g~~-~~~~~l~----p~~---~~~~~-------------------~~~~~~--------------~~~~L~i~~v~~ 304 (356)
|..|.. .....+. |.. +.... .+.|.. ..+.|.|.+++.
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 162 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQK 162 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCG
T ss_pred cCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCCh
Confidence 998873 3333333 110 00000 344532 234799999999
Q ss_pred CCCeEEEEEEEcCCcceEE-EEEEEEEecC
Q psy12422 305 EDEGVYVCTATNSLGTAET-KCKLTVRSTP 333 (356)
Q Consensus 305 ~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p 333 (356)
+|+|.|+|.|.|..|...+ .+.|.|+++|
T Consensus 163 ~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 163 EDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred hhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 9999999999999998854 7999999876
No 189
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.86 E-value=3.4e-20 Score=144.27 Aligned_cols=136 Identities=24% Similarity=0.372 Sum_probs=105.5
Q ss_pred CCeecccCCceeecC-CCeEEEEEEEcCCCC--CeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 189 PPQFANKLTDKTIDD-GQCLDLSAVVKGDPE--PRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~-g~~~~l~C~~~g~p~--p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
+|.+...+ ...+.+ |+.+.|.|.+.+.|. +.+.|+++|..+....... ....|.|.+++.+|+|.|+|.|.
T Consensus 3 ~P~i~~~~-~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~ 76 (190)
T 2wv3_A 3 EPRIVTSE-EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVYH 76 (190)
T ss_dssp CCEEEECC-CEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCcccccc-eEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEEE
Confidence 56666543 455666 999999999998887 7899999999987654322 44689999999999999999999
Q ss_pred cCCCceEEEEEEecCCCCccc--------------------------eeEEeC----------------------CeEEE
Q psy12422 266 NSLGTAETKCKLTPLNSSNIL--------------------------DLKYKN----------------------GVASL 297 (356)
Q Consensus 266 n~~g~~~~~~~l~p~~~~~~~--------------------------~~~~~~----------------------~~~~L 297 (356)
|. +.....+.|.....|.+. .+.|.. ....|
T Consensus 77 n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L 155 (190)
T 2wv3_A 77 FV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTEL 155 (190)
T ss_dssp ET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEE
T ss_pred eC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEE
Confidence 99 877777666633222211 333432 12379
Q ss_pred EEecCC-CCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 298 QIQEVF-PEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 298 ~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
.|.+++ .+|+|.|+|.|.|..|..+..+.|.|++
T Consensus 156 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~V 190 (190)
T 2wv3_A 156 NIVNLQITEDPGEYECNATNSIGSASVSTVLRVRV 190 (190)
T ss_dssp EECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEEeccccCCCEEEEEEEEecCCcceeEEEEEEEC
Confidence 999999 7999999999999999999999999874
No 190
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.86 E-value=1.3e-20 Score=152.55 Aligned_cols=169 Identities=18% Similarity=0.171 Sum_probs=108.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--EE---cc----------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--RE---LS----------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~~---l~----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+.|.+.+.|||+. .. +. ..++.....++..+|+|.+++.+|+|.|.|.+.|..+
T Consensus 16 G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~ 95 (242)
T 2znx_A 16 GNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSXP 95 (242)
T ss_dssp TCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred CCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEeEecCCc
Confidence 789999999999999999999952 11 10 1234444445667999999999999999999998754
Q ss_pred ee-EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccc
Q psy12422 66 TD-ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSS 144 (356)
Q Consensus 66 ~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (356)
.. ...+.|.|..++......
T Consensus 96 ~~~~~~~~L~V~~~~~~~~~~----------------------------------------------------------- 116 (242)
T 2znx_A 96 YTFGGGTKLEITGGGGSGGGG----------------------------------------------------------- 116 (242)
T ss_dssp CEECCCEEEEEC--------------------------------------------------------------------
T ss_pred eEECCCEEEEEcCCCCCCccc-----------------------------------------------------------
Confidence 32 233456665331100000
Q ss_pred cccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCC--CCeEE
Q psy12422 145 STNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDP--EPRVS 222 (356)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p--~p~i~ 222 (356)
.. ...++.....+....+.+|++++|.|.+.+.| .+.+.
T Consensus 117 -----------------------------------~~----~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~ 157 (242)
T 2znx_A 117 -----------------------------------SG----GGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXS 157 (242)
T ss_dssp ---------------------------------------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEE
T ss_pred -----------------------------------cc----ccccceeeecCCcceecCCCeEEEEEEEEccccCCccee
Confidence 00 00111111222234588999999999999886 47899
Q ss_pred EEEC--CEEcc----------------CCCceeEEEe--CCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 223 WTKN--GQPLN----------------SSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 223 W~~~--g~~~~----------------~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
|+++ +..+. ...++....+ ....+|.|.+++.+|+|.|.|.|.|.
T Consensus 158 W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 158 XIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred eEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 9994 22210 1233333322 34578999999999999999999984
No 191
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.86 E-value=8.1e-21 Score=154.79 Aligned_cols=173 Identities=14% Similarity=0.163 Sum_probs=114.2
Q ss_pred CCceEEEEEeccCC--CCeeEEeeC--CEEcc------------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKG--NRELS------------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~--g~~l~------------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.|.+ .+.+.|||. +..+. ..++.+.. ..+.++|+|.+++.+|+|.|
T Consensus 16 G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 95 (253)
T 3uzq_A 16 GASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSGDTAVY 95 (253)
T ss_dssp TCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCcccCEEE
Confidence 78999999998854 678999992 21110 12333332 23467899999999999999
Q ss_pred EEEEEeCCcee-EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEE
Q psy12422 57 KCVATNKHGTD-ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQM 135 (356)
Q Consensus 57 ~C~a~n~~g~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~ 135 (356)
.|.+.|..+.. .....|.|.........
T Consensus 96 ~C~~~~~~~~~~~~~~~l~V~~~~~~~~~--------------------------------------------------- 124 (253)
T 3uzq_A 96 YCSRGWEGFAYWGQGTLVTVSAGGGGSGG--------------------------------------------------- 124 (253)
T ss_dssp EEEECSSSCCEECCCEEEEECSSSCCCCC---------------------------------------------------
T ss_pred EEEEeeCCccEECCCcEEEEecCCccccc---------------------------------------------------
Confidence 99999865443 23445555421000000
Q ss_pred eeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC
Q psy12422 136 STLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG 215 (356)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g 215 (356)
.. ......+|.+...+....+.+|++++|.|.+.+
T Consensus 125 ----------------------------------------~~-----~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 159 (253)
T 3uzq_A 125 ----------------------------------------GG-----SGGGGSELVMTQTPASLAVSLGQRATISCRASE 159 (253)
T ss_dssp ------------------------------------------------------CCEEEECSEEEECTTSCEEEEEEESS
T ss_pred ----------------------------------------cc-----cCCCcccceEECcCCeEEEeCCCCEEEEEEecC
Confidence 00 000023455555566778999999999999999
Q ss_pred CCCC----eEEEEEC--CEEcc------------CCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 216 DPEP----RVSWTKN--GQPLN------------SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 216 ~p~p----~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
.|.+ .+.|+|+ +..+. ...++.........+|.|.+++.+|+|.|.|.|.|..+
T Consensus 160 ~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 231 (253)
T 3uzq_A 160 NVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVP 231 (253)
T ss_dssp CCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred ccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCC
Confidence 8887 8999984 22211 11344444556677899999999999999999999654
No 192
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=5.2e-21 Score=155.32 Aligned_cols=155 Identities=12% Similarity=0.109 Sum_probs=105.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCee--EEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc-----eeEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYS--MSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG-----TDETNCVV 73 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~--~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g-----~~~~~~~l 73 (356)
|++|+|.|.+.+ +.+.|.|||+|..+...... .........|.|.+++.+|+|.|+|.+.|... ..+..+.|
T Consensus 21 G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L 99 (257)
T 1b6u_A 21 EETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDI 99 (257)
T ss_dssp SCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEE
T ss_pred CCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEE
Confidence 789999999974 56789999998765321100 01122345899999999999999999986421 12334555
Q ss_pred EEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCc
Q psy12422 74 IVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPS 153 (356)
Q Consensus 74 ~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (356)
.|.+.
T Consensus 100 ~V~~~--------------------------------------------------------------------------- 104 (257)
T 1b6u_A 100 VITGL--------------------------------------------------------------------------- 104 (257)
T ss_dssp EEECS---------------------------------------------------------------------------
T ss_pred ecccC---------------------------------------------------------------------------
Confidence 55432
Q ss_pred cceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC
Q psy12422 154 KKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS 233 (356)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~ 233 (356)
..+|.+...+. ..+.+|++++|.|.+.+.+ +.+.|+|+|..+...
T Consensus 105 ---------------------------------~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~ 149 (257)
T 1b6u_A 105 ---------------------------------YEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERR 149 (257)
T ss_dssp ---------------------------------SCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEEC
T ss_pred ---------------------------------CCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcc
Confidence 22344443333 2578999999999998754 689999999776543
Q ss_pred CceeEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 234 NILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 234 ~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
....... ......|.|.+++ |+|.|+|.|.|..
T Consensus 150 ~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~ 183 (257)
T 1b6u_A 150 FSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRD 183 (257)
T ss_dssp CBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSS
T ss_pred cccccccCCceeEEEEecccc--cCEEEEEEEEcCC
Confidence 2111111 1124689999998 9999999999764
No 193
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.86 E-value=9e-21 Score=154.77 Aligned_cols=178 Identities=15% Similarity=0.204 Sum_probs=111.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--EE---cc-----------cCCeeE--EecCCeEEEEEeeCCCCCCeEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--RE---LS-----------KRDYSM--SYSDGVVSMEIIDCKPEDSGEYKCVATN 62 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~~---l~-----------~~~~~~--~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 62 (356)
|++|+|.|.+.+.|.+.+.|||.. .. +. ..++.. ....+..+|+|.+++.+|+|.|.|.+.|
T Consensus 18 G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~ 97 (256)
T 3tf7_C 18 GASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSA 97 (256)
T ss_dssp TSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEEC
T ss_pred CCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEec
Confidence 789999999999999999999932 11 10 123333 2345667899999999999999999998
Q ss_pred CCce----eEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeec
Q psy12422 63 KHGT----DETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTL 138 (356)
Q Consensus 63 ~~g~----~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (356)
..+. ....+.|.|.......... +
T Consensus 98 ~~~~~~~~~~~~~~l~V~~~~~~~~~~---------~------------------------------------------- 125 (256)
T 3tf7_C 98 KGTGSKLSFGKGAKLTVSPGGGGSGGG---------G------------------------------------------- 125 (256)
T ss_dssp TTCTTCEEECCCEEEEEEC-------------------------------------------------------------
T ss_pred CCCccceEECCCeEEEEeCCCCCcCCC---------C-------------------------------------------
Confidence 7542 1223455554210000000 0
Q ss_pred cccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCC
Q psy12422 139 SSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE 218 (356)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~ 218 (356)
...... .....+|.+...+....+.+|++++|.|.+.+. .
T Consensus 126 ------------------------------~~~~~~---------~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~ 165 (256)
T 3tf7_C 126 ------------------------------SGGGGS---------GGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS-H 165 (256)
T ss_dssp ---------------------------------------------------CCEEESCSEEEEETTCCEEECEEECSC-C
T ss_pred ------------------------------cCcccC---------CCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC-c
Confidence 000000 000334556666677788899999999999877 7
Q ss_pred CeEEEEECC--EEcc---------------CCCceeEEE-eCCEEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 219 PRVSWTKNG--QPLN---------------SSNILDLKY-KNGVASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 219 p~i~W~~~g--~~~~---------------~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
+.+.|++.. .... ...++.... .....+|.|.+++.+|+|.|.|.|.|..|.
T Consensus 166 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 166 NYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp SEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred eEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 789999832 1110 011111111 223458999999999999999999998774
No 194
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.86 E-value=2.6e-20 Score=152.17 Aligned_cols=81 Identities=15% Similarity=0.199 Sum_probs=60.9
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCCCC-eEEEEEC--CEEcc------------CCCceeEEEeCCEEEEEEccCC
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDPEP-RVSWTKN--GQPLN------------SSNILDLKYKNGVASLQIQEVF 253 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~i~~v~ 253 (356)
++.+...+....+.+|++++|.|.+.+.|.+ .+.|+|. +..+. ...++.........+|.|.+++
T Consensus 141 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 220 (257)
T 3gkz_A 141 QIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSME 220 (257)
T ss_dssp CCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCC
Confidence 3455555666789999999999999998887 8999983 32221 0134444445566789999999
Q ss_pred CCCCeEEEEEEEcCCC
Q psy12422 254 PEDEGVYVCTATNSLG 269 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~g 269 (356)
.+|+|.|.|.|.|...
T Consensus 221 ~~D~G~Y~C~~~~~~~ 236 (257)
T 3gkz_A 221 AEDAASYFCHQWSSFP 236 (257)
T ss_dssp GGGCEEEEEEECSSSS
T ss_pred hHHCEEEEEEEccCCc
Confidence 9999999999988643
No 195
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.86 E-value=1.4e-21 Score=165.92 Aligned_cols=140 Identities=16% Similarity=0.299 Sum_probs=99.6
Q ss_pred cCCceeecCC---CeEEEEEE-EcCCCCCeEEEEECCEEccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEEEEEc
Q psy12422 195 KLTDKTIDDG---QCLDLSAV-VKGDPEPRVSWTKNGQPLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 195 ~~~~~~v~~g---~~~~l~C~-~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
.+....+.+| +.+.|.|. +.++|.|.+.|++++....... ......+ ...|.|.+++.+|+|.|+|.|.|
T Consensus 138 ~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 215 (331)
T 3u83_A 138 TQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQ--EIRNPNGTVTVISRYRLVPSREAHQQSLACIVNY 215 (331)
T ss_dssp CSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEE--EEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEE
T ss_pred CCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccc--eeECCCCcEEEEEEEEEEeccccCCCEEEEEEec
Confidence 4466778888 78999998 7899999999999532211100 0111111 24699999999999999999999
Q ss_pred CCCceEEEEEEecCCCCcc----------c-----------------e-eEEeC-----------CeEEEEEe-cCCCCC
Q psy12422 267 SLGTAETKCKLTPLNSSNI----------L-----------------D-LKYKN-----------GVASLQIQ-EVFPED 306 (356)
Q Consensus 267 ~~g~~~~~~~l~p~~~~~~----------~-----------------~-~~~~~-----------~~~~L~i~-~v~~~d 306 (356)
..|.....+.|.+..+|.+ . . +.|.. ....|.|. +++.+|
T Consensus 216 ~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~L~i~~~v~~~d 295 (331)
T 3u83_A 216 HMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSL 295 (331)
T ss_dssp TTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECSCCCGGG
T ss_pred CCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccceecCcEEEEeCCCcccc
Confidence 9988777666652111110 0 3 66654 23579999 999999
Q ss_pred CeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 307 EGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 307 ~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
+|.|+|.|.|..|..+..+.|.|++.+...
T Consensus 296 ~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 325 (331)
T 3u83_A 296 AGTYICEATNPIGTRSGQVEVNITEAAALE 325 (331)
T ss_dssp CEEEEEEEEETTEEEEEEEEECCBC-----
T ss_pred CeEEEEEEEeccccceEEEEEEEeccchhh
Confidence 999999999999999999999999987643
No 196
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.85 E-value=4.1e-20 Score=160.42 Aligned_cols=146 Identities=25% Similarity=0.467 Sum_probs=115.5
Q ss_pred CeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEEC--CEEccC-----CCceeEEEeCCEEEEEEccCCCCCCeEEEE
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKN--GQPLNS-----SNILDLKYKNGVASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~--g~~~~~-----~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 262 (356)
|.+.. +.+..+.+|+.+.|.|.+.|+|.|.|.|+++ |..+.. ..++..........|.|.+++.+|+|.|+|
T Consensus 2 P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (389)
T 2jll_A 2 PHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDC 80 (389)
T ss_dssp CEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEE
T ss_pred CeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEE
Confidence 55554 4566788999999999999999999999999 888765 345555555567899999999999999999
Q ss_pred EEEcCCCceEEEEEEecCCCCccc--------------------------eeEEeC-------------------CeEEE
Q psy12422 263 TATNSLGTAETKCKLTPLNSSNIL--------------------------DLKYKN-------------------GVASL 297 (356)
Q Consensus 263 ~a~n~~g~~~~~~~l~p~~~~~~~--------------------------~~~~~~-------------------~~~~L 297 (356)
.|.|..|.....+.|.+...|.+. .+.|.. ....|
T Consensus 81 ~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L 160 (389)
T 2jll_A 81 EAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMIL 160 (389)
T ss_dssp EEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEE
T ss_pred EEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEE
Confidence 999999988877777622111110 344432 23579
Q ss_pred EEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 298 QIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 298 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
.|.++..+|+|.|+|.|.|..|.....+.|.|..+|..+
T Consensus 161 ~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P 199 (389)
T 2jll_A 161 EIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSP 199 (389)
T ss_dssp EECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCC
T ss_pred EECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCC
Confidence 999999999999999999999999999999887777544
No 197
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.85 E-value=5.3e-20 Score=150.26 Aligned_cols=177 Identities=20% Similarity=0.278 Sum_probs=111.1
Q ss_pred CCceEEEEEeccC--CCCeeEEeeCC--EEc-------------ccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeC
Q psy12422 1 MQNVIKVKVGSTK--PPPTVKWYKGN--REL-------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNK 63 (356)
Q Consensus 1 g~~v~l~C~~~g~--p~~~v~W~k~g--~~l-------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 63 (356)
|++|+|.|.+.+. |.+.+.|||+. ..+ ...++.....++.++|+|.+++.+|+|.|.|.+.|.
T Consensus 17 G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (256)
T 3ux9_B 17 GQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYYCQVRDN 96 (256)
T ss_dssp TCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEEEEEEEC
Confidence 7899999999877 78899999942 111 112444445556679999999999999999999986
Q ss_pred Cce---eEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccc
Q psy12422 64 HGT---DETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSS 140 (356)
Q Consensus 64 ~g~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (356)
.+. ....+.|.|...+.... +.+.+.|....
T Consensus 97 ~~~~~~~~~~~~l~V~~~~~~~~----------------------~~~~~~~~~~~------------------------ 130 (256)
T 3ux9_B 97 NENEWVFGGGTKLTVLGSGGSTI----------------------TSYNVYYTKLS------------------------ 130 (256)
T ss_dssp TTTEEEECCCEEEEEC----------------------------------------------------------------
T ss_pred CCCceEECCCEEEEEECCCCCcC----------------------ccceeEEeecC------------------------
Confidence 542 22345666654321100 00001110000
Q ss_pred cccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCC--C
Q psy12422 141 NYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDP--E 218 (356)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p--~ 218 (356)
....++.+... ....+.+|++++|.|.+.+.| .
T Consensus 131 --------------------------------------------~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~ 165 (256)
T 3ux9_B 131 --------------------------------------------SSGSEVQLVES-GGGLVQPGGSLRLSCAASGFTFSS 165 (256)
T ss_dssp ------------------------------------------------CCEEEEE-CCEEECTTCCEEEEEEEESSCGGG
T ss_pred --------------------------------------------CCccceeEEcC-CCeEEcCCCeEEEEEEEeCCcccc
Confidence 00111222222 234588999999999999877 6
Q ss_pred CeEEEEEC--CEEcc-----------------CCCceeEEEe--CCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 219 PRVSWTKN--GQPLN-----------------SSNILDLKYK--NGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 219 p~i~W~~~--g~~~~-----------------~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
+.+.|+|+ +..+. ...++....+ ....+|.|.+++.+|+|.|.|.|.|..
T Consensus 166 ~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 166 YAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp SEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 78999985 32210 1123444433 346789999999999999999999964
No 198
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.85 E-value=3.4e-20 Score=144.93 Aligned_cols=139 Identities=21% Similarity=0.295 Sum_probs=106.5
Q ss_pred CCeecccCCceeecCCCeEEEEEEEc-CCCCCeEEEEECCEEccCCC--ceeEEEeCC-------EEEEEEccCCCCCCe
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVK-GDPEPRVSWTKNGQPLNSSN--ILDLKYKNG-------VASLQIQEVFPEDEG 258 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~~g~~~~~~~--~~~~~~~~~-------~~~L~i~~v~~~d~G 258 (356)
+|.|...+.+..+.+|+++.|.|.+. |.|.+.+.|+++|..+.... +..+..... ...|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 56777888889999999999999998 99999999999999988663 233332222 468999999999999
Q ss_pred EEEEEEEcCCCceEEE-EEEecCCCCccc---------------------------eeEEeC------------CeEEEE
Q psy12422 259 VYVCTATNSLGTAETK-CKLTPLNSSNIL---------------------------DLKYKN------------GVASLQ 298 (356)
Q Consensus 259 ~Y~C~a~n~~g~~~~~-~~l~p~~~~~~~---------------------------~~~~~~------------~~~~L~ 298 (356)
.|+|.|.|..|..... +.|.....|.+. .+.|.. ....|.
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~L~ 161 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQRSLH 161 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTSSCCEEEE
T ss_pred EEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCcCCCCeEE
Confidence 9999999987754332 333311111110 345543 457899
Q ss_pred EecCCCCCCeEEEEEEEcCCcceE-EEEEEEE
Q psy12422 299 IQEVFPEDEGVYVCTATNSLGTAE-TKCKLTV 329 (356)
Q Consensus 299 i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V 329 (356)
|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 162 i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 162 VPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp ECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred Ecccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 99987 89999999999999986 6899988
No 199
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.85 E-value=2e-20 Score=152.06 Aligned_cols=166 Identities=17% Similarity=0.217 Sum_probs=106.4
Q ss_pred CCceEEEEEeccCCCCe-----eEEeeCCEEccc--------CCeeEE-----------ecCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKPPPT-----VKWYKGNRELSK--------RDYSMS-----------YSDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~-----v~W~k~g~~l~~--------~~~~~~-----------~~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.|.|++. |.|+|++..... ...... ...+..+|.|.+++.+|+|.|
T Consensus 18 G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 97 (248)
T 3pv7_A 18 NDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEEAGEY 97 (248)
T ss_dssp TSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGGCEEE
T ss_pred CCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHHCeEE
Confidence 78999999999888876 999996322110 000000 112344699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEe
Q psy12422 57 KCVATNKHGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMS 136 (356)
Q Consensus 57 ~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~ 136 (356)
+|.+.|..+.....+.|.|..+
T Consensus 98 ~C~~~~~~~~~~~~~~L~V~~~---------------------------------------------------------- 119 (248)
T 3pv7_A 98 RCEVVVTPLKAQGTVQLEVVAS---------------------------------------------------------- 119 (248)
T ss_dssp EEEEEETTEEEEEEEEEEEEBC----------------------------------------------------------
T ss_pred EEEEEeCCccceeEEEEEEecC----------------------------------------------------------
Confidence 9999999888777788877642
Q ss_pred eccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC-
Q psy12422 137 TLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG- 215 (356)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g- 215 (356)
|.+...+. ..+..|+.+.|.|.+.|
T Consensus 120 -----------------------------------------------------P~v~~~~~-~~~~~~~~~~L~C~~~g~ 145 (248)
T 3pv7_A 120 -----------------------------------------------------PASRLLLD-QVGMKENEDKYMCESSGF 145 (248)
T ss_dssp -----------------------------------------------------CEEEEECC---------CEEEEEEEEE
T ss_pred -----------------------------------------------------CceEEecC-CccccCCCcEEEEEEccE
Confidence 11111111 12345778889999988
Q ss_pred CCCC-eEEEEECCEEccCCCc-------eeEEEe-CC----EEEEEEccCCCCCCeEEEEEEEcCCCceEE--EEEEe
Q psy12422 216 DPEP-RVSWTKNGQPLNSSNI-------LDLKYK-NG----VASLQIQEVFPEDEGVYVCTATNSLGTAET--KCKLT 278 (356)
Q Consensus 216 ~p~p-~i~W~~~g~~~~~~~~-------~~~~~~-~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~--~~~l~ 278 (356)
+|.| .|.|+++|..+..... ...... .+ .+.|.|.....+|.|.|+|.|.|..+.... .+.|.
T Consensus 146 ~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~ 223 (248)
T 3pv7_A 146 YPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLT 223 (248)
T ss_dssp BSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC-
T ss_pred ECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEE
Confidence 8998 9999999864432110 001111 11 257899999999999999999999987444 44443
No 200
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.85 E-value=7e-20 Score=146.21 Aligned_cols=76 Identities=13% Similarity=0.259 Sum_probs=55.4
Q ss_pred ecCCCeEEEEEEEcCC-CCC-eEEEEE-CCEEccCCCceeEEEeCC----EEEEEEccCCC--CCCeEEEEEEEcCCCce
Q psy12422 201 IDDGQCLDLSAVVKGD-PEP-RVSWTK-NGQPLNSSNILDLKYKNG----VASLQIQEVFP--EDEGVYVCTATNSLGTA 271 (356)
Q Consensus 201 v~~g~~~~l~C~~~g~-p~p-~i~W~~-~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~--~d~G~Y~C~a~n~~g~~ 271 (356)
+.+|+.++|.|.+.|. |.| .+.|++ +|..+............+ .+.|.|..... +|.|.|+|.|.|..+..
T Consensus 138 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~ 217 (223)
T 1dee_B 138 SNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNK 217 (223)
T ss_dssp CCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCE
T ss_pred cCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCC
Confidence 5689999999999876 777 899999 988775410000000112 24688888876 88999999999999988
Q ss_pred EEEEE
Q psy12422 272 ETKCK 276 (356)
Q Consensus 272 ~~~~~ 276 (356)
.....
T Consensus 218 ~~~~~ 222 (223)
T 1dee_B 218 EKDVP 222 (223)
T ss_dssp EEEEE
T ss_pred ccccc
Confidence 77653
No 201
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.85 E-value=2.2e-21 Score=154.91 Aligned_cols=77 Identities=9% Similarity=0.088 Sum_probs=56.5
Q ss_pred cCCCeE-EEEEEEc-CCCCCeEEEEECCEEccCCCceeEEEe---CCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 202 DDGQCL-DLSAVVK-GDPEPRVSWTKNGQPLNSSNILDLKYK---NGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 202 ~~g~~~-~l~C~~~-g~p~p~i~W~~~g~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
.+|+.+ .|.|.+. |+|.|.+.|++++.............. ...+.|.|.++..+|.|.|+|.|.|..+.....+.
T Consensus 128 ~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~ 207 (221)
T 3eow_R 128 LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLT 207 (221)
T ss_dssp CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEE
T ss_pred cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEE
Confidence 568888 5999986 899999999987543332211110111 12368999999999999999999999998777777
Q ss_pred Ee
Q psy12422 277 LT 278 (356)
Q Consensus 277 l~ 278 (356)
+.
T Consensus 208 v~ 209 (221)
T 3eow_R 208 VS 209 (221)
T ss_dssp EC
T ss_pred EE
Confidence 65
No 202
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.85 E-value=5e-21 Score=155.41 Aligned_cols=167 Identities=17% Similarity=0.241 Sum_probs=112.1
Q ss_pred CCceEEEEEeccCCCCeeEEee----------------CCEEccc----CCeeEEe-cCCeEEEEEeeCCCCCCeEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYK----------------GNRELSK----RDYSMSY-SDGVVSMEIIDCKPEDSGEYKCV 59 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k----------------~g~~l~~----~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~ 59 (356)
|++|+|.|.+.+.|.+.|.||| ++..... .++.+.. ..+.++|+|.+++.+|+|.|.|.
T Consensus 16 G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 95 (246)
T 4dzb_B 16 GTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICS 95 (246)
T ss_dssp TSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHCEEEEEE
Confidence 7999999999999999999999 3332222 2233322 34567999999999999999999
Q ss_pred EEeCCc----eeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEE
Q psy12422 60 ATNKHG----TDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQM 135 (356)
Q Consensus 60 a~n~~g----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~ 135 (356)
+.|..+ .......|.|.....
T Consensus 96 ~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------------------------------- 120 (246)
T 4dzb_B 96 ARTSGDFGEQFFGPGTRLTVLEDLK------------------------------------------------------- 120 (246)
T ss_dssp ECCSSGGGCCEECCCEEEEEESCGG-------------------------------------------------------
T ss_pred EecCCCCcceEEcCCEEEEEecCCC-------------------------------------------------------
Confidence 987643 112233444432100
Q ss_pred eeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeec-ccCCceeecCCCeEEEEEEEc
Q psy12422 136 STLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFA-NKLTDKTIDDGQCLDLSAVVK 214 (356)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~~~l~C~~~ 214 (356)
...+|.+. ..+....+.+|+.++|.|.+.
T Consensus 121 --------------------------------------------------~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~ 150 (246)
T 4dzb_B 121 --------------------------------------------------NVFPPEVAVFEPSEAEISHTQKATLVCLAT 150 (246)
T ss_dssp --------------------------------------------------GCBCCEEEEECCCHHHHHHHSEEEEEEEEE
T ss_pred --------------------------------------------------cccCCceEeecCCchhccCCCcEEEEEEEc
Confidence 01223332 233444567799999999998
Q ss_pred CCCCC--eEEEEECCEEccCCCceeEEE-------eCC----EEEEEEccCCCCC-CeEEEEEEEcCCCceE
Q psy12422 215 GDPEP--RVSWTKNGQPLNSSNILDLKY-------KNG----VASLQIQEVFPED-EGVYVCTATNSLGTAE 272 (356)
Q Consensus 215 g~p~p--~i~W~~~g~~~~~~~~~~~~~-------~~~----~~~L~i~~v~~~d-~G~Y~C~a~n~~g~~~ 272 (356)
|.|++ .+.|+++|..+.......... .++ .+.|.|.....+| .|.|+|.|.|......
T Consensus 151 g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 151 GFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred cCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 87665 799999999887543211100 112 1358899998888 9999999999876544
No 203
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.85 E-value=1.7e-20 Score=150.22 Aligned_cols=172 Identities=16% Similarity=0.216 Sum_probs=108.3
Q ss_pred CCceEEEEEeccCC--CCeeEEeeCC--EE---c---c------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKGN--RE---L---S------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~g--~~---l---~------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.+.| .+.|.|||++ .. + . ..++.... ..+..+|+|.+++.+|+|.|
T Consensus 15 G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y 94 (227)
T 1mju_H 15 GASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSDDSAVY 94 (227)
T ss_dssp TCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCcccCEEE
Confidence 79999999998877 6789999953 21 1 0 12333322 24567999999999999999
Q ss_pred EEEEEeCCcee-EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEE
Q psy12422 57 KCVATNKHGTD-ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQM 135 (356)
Q Consensus 57 ~C~a~n~~g~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~ 135 (356)
.|.+.|..+.. ...+.|.|....
T Consensus 95 ~C~~~~~~~~~~~~~~~L~V~~~~-------------------------------------------------------- 118 (227)
T 1mju_H 95 YCANKLGWFPYWGQGTLVTVSAAK-------------------------------------------------------- 118 (227)
T ss_dssp EEEEEETTEEEECCCEEEEECSSC--------------------------------------------------------
T ss_pred EEEECCCCceEEcCcEEEEEcCCC--------------------------------------------------------
Confidence 99998864221 122345554210
Q ss_pred eeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC
Q psy12422 136 STLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG 215 (356)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g 215 (356)
..+|.+........+.+|+.++|.|.+.|
T Consensus 119 ---------------------------------------------------~~~P~v~~~~~~~~~~~g~~v~L~C~~~g 147 (227)
T 1mju_H 119 ---------------------------------------------------TTAPSVYPLAPVCGDTSGSSVTLGCLVKG 147 (227)
T ss_dssp ---------------------------------------------------CBCCEEEEECCCC------CEEEEEEEEE
T ss_pred ---------------------------------------------------CCCCEEEEecCCccccCCCcEEEEEEeec
Confidence 11222222111123567999999999987
Q ss_pred C-CCC-eEEEEECCEEccCCCceeEEEeC---CEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 216 D-PEP-RVSWTKNGQPLNSSNILDLKYKN---GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 216 ~-p~p-~i~W~~~g~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
. |.| .|.|+++|..+...........+ ..+.|.|..+..+| |.|+|.|.|..+.......+.+.
T Consensus 148 ~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 148 YFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp EBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred EeCCCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCC
Confidence 5 776 89999998764211000011111 13579999999988 99999999988887777777643
No 204
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.84 E-value=8.1e-21 Score=151.91 Aligned_cols=76 Identities=18% Similarity=0.339 Sum_probs=53.5
Q ss_pred ecCCCeEEEEEEEcCC-CCC-eEEEEECCEEccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEEE
Q psy12422 201 IDDGQCLDLSAVVKGD-PEP-RVSWTKNGQPLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAETK 274 (356)
Q Consensus 201 v~~g~~~~l~C~~~g~-p~p-~i~W~~~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 274 (356)
+.+|+.++|.|.+.|. |.| .|.|++++..+...........++ .+.|.|.++..+| |.|+|.|.|..+.....
T Consensus 140 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 218 (225)
T 1op3_H 140 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 218 (225)
T ss_dssp CCCCCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEEEE
T ss_pred ccCCCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCccEE
Confidence 4679999999999876 766 899999886532110000011111 2469999999889 99999999988776655
Q ss_pred EEE
Q psy12422 275 CKL 277 (356)
Q Consensus 275 ~~l 277 (356)
..+
T Consensus 219 ~~~ 221 (225)
T 1op3_H 219 KKV 221 (225)
T ss_dssp ECC
T ss_pred EEe
Confidence 544
No 205
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.84 E-value=9.6e-21 Score=151.02 Aligned_cols=167 Identities=17% Similarity=0.258 Sum_probs=110.9
Q ss_pred CCceEEEEEeccCC--CCeeEEeeCC--EE---c-c----------------cCCeeEEe--cCCeEEEEEeeCCCCCCe
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKGN--RE---L-S----------------KRDYSMSY--SDGVVSMEIIDCKPEDSG 54 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~g--~~---l-~----------------~~~~~~~~--~~~~~~L~i~~~~~~D~G 54 (356)
|++|+|.|.+.+.| .+.+.|||++ .. + . ..++.... ..+..+|+|.+++.+|+|
T Consensus 15 G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 94 (220)
T 1pz5_B 15 GGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTG 94 (220)
T ss_dssp TCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred CCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCCHHHCE
Confidence 78999999998876 6889999953 11 1 0 12333322 245679999999999999
Q ss_pred EEEEEEEeCCcee-E--EEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCce
Q psy12422 55 EYKCVATNKHGTD-E--TNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRT 131 (356)
Q Consensus 55 ~Y~C~a~n~~g~~-~--~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~ 131 (356)
.|.|.+.|..+.. . ..+.|.|....
T Consensus 95 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~---------------------------------------------------- 122 (220)
T 1pz5_B 95 IYYCTRGGAVGAMDYWGQGTSVTVSSAT---------------------------------------------------- 122 (220)
T ss_dssp EEEEEEECTTSSEEEECCCEEEEECSSC----------------------------------------------------
T ss_pred EEEEEEecCCcccceECCCEEEEEccCC----------------------------------------------------
Confidence 9999999875321 1 23444443210
Q ss_pred EEEEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEE
Q psy12422 132 TTQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSA 211 (356)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C 211 (356)
..+|.+...+....+.+|+.++|.|
T Consensus 123 -------------------------------------------------------~~~P~i~~~~~~~~~~~g~~v~L~C 147 (220)
T 1pz5_B 123 -------------------------------------------------------TTAPSVYPLVPGCSDTSGSSVTLGC 147 (220)
T ss_dssp -------------------------------------------------------CBCCEEEEECCCSCCSCSSSEEEEE
T ss_pred -------------------------------------------------------CCCCeEEEcccccccCCCCcEEEEE
Confidence 1223333222222457899999999
Q ss_pred EEcCC-CCC-eEEEEECCEEcc--CCCceeEEEeC---CEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 212 VVKGD-PEP-RVSWTKNGQPLN--SSNILDLKYKN---GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 212 ~~~g~-p~p-~i~W~~~g~~~~--~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
.+.|. |.| .|.|++++.... ...... ..+ ..+.|.|.++..+| |.|+|.|.|..|..++++.+
T Consensus 148 ~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~ 217 (220)
T 1pz5_B 148 LVKGYFPEPVTVKWNYGALSSGVRTVSSVL--QSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKEI 217 (220)
T ss_dssp EEEEEBSSCCEEEEGGGTCCTTEEECCCEE--ETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEEEeCCCeEEEEecCCcccceEEcCCcc--cCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeecC
Confidence 99886 888 999999876311 000000 001 13579999999877 99999999999987776654
No 206
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.84 E-value=1.2e-20 Score=144.97 Aligned_cols=148 Identities=14% Similarity=0.199 Sum_probs=102.2
Q ss_pred CCceEEEEEecc-CCCCeeEEeeC-CEEcc------------cC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGST-KPPPTVKWYKG-NRELS------------KR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g-~p~~~v~W~k~-g~~l~------------~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+ .+.+.|.|+|+ +..+. .. +.+.....+..+|+|.+++.+|+|.|+|.+.+..
T Consensus 14 G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~v~~~~- 92 (180)
T 2dru_A 14 GSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMRMLHET- 92 (180)
T ss_dssp TSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEEEEESSS-
T ss_pred CCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEEEEEcCC-
Confidence 899999999844 44689999994 33221 10 0111221233479999999999999999998876
Q ss_pred eeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeecccccccc
Q psy12422 66 TDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSS 145 (356)
Q Consensus 66 ~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (356)
.....+.|.|..+
T Consensus 93 ~~~~~~~L~V~~~------------------------------------------------------------------- 105 (180)
T 2dru_A 93 EDQWKITMEVYEM------------------------------------------------------------------- 105 (180)
T ss_dssp EEEEEEEEEEECC-------------------------------------------------------------------
T ss_pred eEEEEEEEEEECC-------------------------------------------------------------------
Confidence 5566677777532
Q ss_pred ccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE-cCCCCCeEEEE
Q psy12422 146 TNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV-KGDPEPRVSWT 224 (356)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~ 224 (356)
...|.+.. .+..++|.|.+ .| |.|.+.|+
T Consensus 106 -----------------------------------------~~~P~i~~--------~~~~v~L~C~~~~g-p~p~i~W~ 135 (180)
T 2dru_A 106 -----------------------------------------VSKPMIYW--------ECSNATLTCEVLEG-TDVELKLY 135 (180)
T ss_dssp -----------------------------------------CCCCEEEE--------EGGGTEEEEECSSC-TTCEEEEE
T ss_pred -----------------------------------------CCCCEEEe--------cCCCEEEEEEeCCC-CCCEEEEE
Confidence 11232221 23458999999 66 99999999
Q ss_pred ECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 225 KNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 225 ~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
+++..+.. ... .+|.+.. .+|+|.|+|.|.|..+.......+
T Consensus 136 ~~~~~l~~-------~~~--~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 136 QGKEHLRS-------LRQ--KTMSYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp ETTEEEEE-------ESS--SEEEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred ECCeECcC-------CCC--CEEEEEE--hhcCccEEEEEecCcCccccceeE
Confidence 99988751 111 2566633 789999999999999987766544
No 207
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.84 E-value=1.6e-20 Score=150.57 Aligned_cols=79 Identities=16% Similarity=0.313 Sum_probs=54.8
Q ss_pred eecCCCeEEEEEEEcCC-CCC-eEEEEECCEEccCCCceeEEEeC---CEEEEEEccCCCCCCeEEEEEEEcCCCceEEE
Q psy12422 200 TIDDGQCLDLSAVVKGD-PEP-RVSWTKNGQPLNSSNILDLKYKN---GVASLQIQEVFPEDEGVYVCTATNSLGTAETK 274 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g~-p~p-~i~W~~~g~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 274 (356)
.+.+|+.++|.|.+.|. |.| .|.|++++..+...........+ ..+.|.|..+..+| |.|+|.|.|..+.....
T Consensus 141 ~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~ 219 (228)
T 3bae_H 141 GDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVD 219 (228)
T ss_dssp ---CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred cccCCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEE
Confidence 35789999999999875 877 89999988654211111111111 13469999998866 99999999999988777
Q ss_pred EEEec
Q psy12422 275 CKLTP 279 (356)
Q Consensus 275 ~~l~p 279 (356)
..+.|
T Consensus 220 ~~~~~ 224 (228)
T 3bae_H 220 KKIVP 224 (228)
T ss_dssp EECCC
T ss_pred EEccc
Confidence 66643
No 208
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.84 E-value=1.1e-21 Score=167.24 Aligned_cols=225 Identities=13% Similarity=0.102 Sum_probs=136.2
Q ss_pred cccccccCccceeeeccc---------CCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceee
Q psy12422 88 AHNFLYSGDRKYIEKHIR---------PAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITR 158 (356)
Q Consensus 88 ~~~~~~~g~~~~l~c~~~---------p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (356)
....+.+|+.+.|.|.+. |.+.+.|++++......... ..+... ..+. +........+.+.|
T Consensus 26 ~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~~~~~~----~~~~---L~i~~v~~~D~G~Y 96 (339)
T 3o4o_C 26 KREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEE--ETRMWA----QDGA---LWLLPALQEDSGTY 96 (339)
T ss_dssp CCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCS--SSCEEE----ETTE---EEESSBCTTCCEEE
T ss_pred eEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccc--cccEEe----eCCe---EEECCCCcccCEEE
Confidence 345678999999999984 56679999987663221110 001000 0000 11112222333333
Q ss_pred eeeccccCCCCCcccccceeeecCCCCCCCCCee--cccCCceeecCCCeEEEEEE-----EcCCCCCeEEEEECCEEcc
Q psy12422 159 RMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQF--ANKLTDKTIDDGQCLDLSAV-----VKGDPEPRVSWTKNGQPLN 231 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~v~~g~~~~l~C~-----~~g~p~p~i~W~~~g~~~~ 231 (356)
.|...... ........+.+ ..++.. ........+.+|+.+.|.|. +.|.|.+.+.|+++|..+.
T Consensus 97 ~C~~~n~~----g~~~~~~~l~V-----~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~ 167 (339)
T 3o4o_C 97 VCTTRNAS----YCDKMSIELRV-----FENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLD 167 (339)
T ss_dssp ECCEEETT----EEEEEEEEEEE-----ECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCC
T ss_pred EEEEECCc----ceEEEEEEEEE-----EcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCC
Confidence 33332211 11222333433 122221 11223357889999999999 8889999999999999887
Q ss_pred CCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCc----eEEEEEEecC-----CCCc------------------
Q psy12422 232 SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT----AETKCKLTPL-----NSSN------------------ 284 (356)
Q Consensus 232 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~----~~~~~~l~p~-----~~~~------------------ 284 (356)
..... +....+...|.|.+++.+|+|.|+|.|.|..|. ....+.|... .+|.
T Consensus 168 ~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L 246 (339)
T 3o4o_C 168 KDNEK-FLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTI 246 (339)
T ss_dssp TTCSS-EEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCC
T ss_pred CCCce-eEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEE
Confidence 65322 222233348999999999999999999999873 3334444311 0111
Q ss_pred ------------cceeEEeCCe-----------------------------EEEEEecCCCCCC-eEEEEEEEcCCcceE
Q psy12422 285 ------------ILDLKYKNGV-----------------------------ASLQIQEVFPEDE-GVYVCTATNSLGTAE 322 (356)
Q Consensus 285 ------------~~~~~~~~~~-----------------------------~~L~i~~v~~~d~-G~Y~C~a~n~~g~~~ 322 (356)
...+.|..+. +.|.|.+++.+|+ |.|+|.|.|..|..+
T Consensus 247 ~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~ 326 (339)
T 3o4o_C 247 PCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQT 326 (339)
T ss_dssp CCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEEC
T ss_pred EEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceE
Confidence 0134444311 1799999999997 999999999999999
Q ss_pred EEEEEEEEe
Q psy12422 323 TKCKLTVRS 331 (356)
Q Consensus 323 ~~~~l~V~~ 331 (356)
+.+.|.+..
T Consensus 327 ~~~~~~~~~ 335 (339)
T 3o4o_C 327 LRTTVKEHH 335 (339)
T ss_dssp CBCCCCC--
T ss_pred EEEEhhHhc
Confidence 888776543
No 209
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.84 E-value=3e-20 Score=147.99 Aligned_cols=164 Identities=14% Similarity=0.226 Sum_probs=108.6
Q ss_pred CCceEEEEEeccCC--CCeeEEeeCC--EE---cc---------------cCCeeEEe--cCCeEEEEEeeCCCCCCeEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKGN--RE---LS---------------KRDYSMSY--SDGVVSMEIIDCKPEDSGEY 56 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~g--~~---l~---------------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y 56 (356)
|++|+|.|.+.+.| .+.+.|||+. .. +. ..++.... ..+..+|+|.+++.+|+|.|
T Consensus 15 G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y 94 (220)
T 2fbj_H 15 GGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSEDTALY 94 (220)
T ss_dssp TCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGGGCEEE
T ss_pred CCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChhhCEEE
Confidence 79999999998876 5789999942 11 10 12333332 24567999999999999999
Q ss_pred EEEEEeCCcee---EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEE
Q psy12422 57 KCVATNKHGTD---ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTT 133 (356)
Q Consensus 57 ~C~a~n~~g~~---~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~ 133 (356)
.|.+.+..+.. ...+.|.|...+
T Consensus 95 ~C~~~~~~~~~~~~~~~~~L~V~~~~------------------------------------------------------ 120 (220)
T 2fbj_H 95 YCARLHYYGYNAYWGQGTLVTVSAES------------------------------------------------------ 120 (220)
T ss_dssp EEEEEETTTEEEEECCCEEEEECSSC------------------------------------------------------
T ss_pred EEEEeccccccceecCCEEEEecCCC------------------------------------------------------
Confidence 99999875431 122344443210
Q ss_pred EEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE
Q psy12422 134 QMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV 213 (356)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~ 213 (356)
..+|.+...+ ...+.+|+.++|.|.+
T Consensus 121 -----------------------------------------------------~~~P~v~~~~-~~~~~~g~~v~L~C~~ 146 (220)
T 2fbj_H 121 -----------------------------------------------------ARNPTIYPLT-LPPALSSDPVIIGCLI 146 (220)
T ss_dssp -----------------------------------------------------CBCCEEEEEC-CCSSSCCSSEEEEEEE
T ss_pred -----------------------------------------------------CCCCEEEEee-cccccCCCcEEEEEEE
Confidence 1223333222 2235689999999999
Q ss_pred cCC-CC--CeEEEEECCEEccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceE
Q psy12422 214 KGD-PE--PRVSWTKNGQPLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAE 272 (356)
Q Consensus 214 ~g~-p~--p~i~W~~~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 272 (356)
.+. |. +.|.|++++..+...........++ .+.|.|.....+|.|.|+|.|.|..+..+
T Consensus 147 ~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 147 HDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred EeEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 876 76 6899999987652100000001111 13699999999999999999999998765
No 210
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.84 E-value=1e-19 Score=141.41 Aligned_cols=138 Identities=21% Similarity=0.339 Sum_probs=106.0
Q ss_pred ecccCCceeecCCCeEEEEEEEcCCCCCeEEEEE-CCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 192 FANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK-NGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 192 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
+...+....+.+|+++.|.|.+.+.|. .+.|++ +|..+....++.....+....|.|.+++.+|+|.|+|.|.|..|.
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 83 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQ 83 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCC
Confidence 444566788999999999999999887 999999 888888777777777777889999999999999999999999887
Q ss_pred e-EEEEEEecCCCCccc--------------------------eeEEeC----------------CeEEEEEecCCCCCC
Q psy12422 271 A-ETKCKLTPLNSSNIL--------------------------DLKYKN----------------GVASLQIQEVFPEDE 307 (356)
Q Consensus 271 ~-~~~~~l~p~~~~~~~--------------------------~~~~~~----------------~~~~L~i~~v~~~d~ 307 (356)
. ...+.+.+...+.+. .+.|.. ..+.|.|.+++.+|+
T Consensus 84 ~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 163 (189)
T 2v44_A 84 TQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDE 163 (189)
T ss_dssp EEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGC
T ss_pred cEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccC
Confidence 6 444444421111100 344432 224799999999999
Q ss_pred eEEEEEEEcCCcceEEEEEEEEE
Q psy12422 308 GVYVCTATNSLGTAETKCKLTVR 330 (356)
Q Consensus 308 G~Y~C~a~n~~g~~~~~~~l~V~ 330 (356)
|.|+|.|.|..|.......+.|.
T Consensus 164 G~Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 164 GIYRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEE
T ss_pred eEEEEEEEccccCceeeeeEEEE
Confidence 99999999999877655444443
No 211
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.84 E-value=6.3e-20 Score=145.70 Aligned_cols=147 Identities=20% Similarity=0.291 Sum_probs=116.4
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC--CceeEEEeCCEEEEEEccCCCCCCeEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS--NILDLKYKNGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
..+|.+ ..+.++.+.+|+.+.|.|.+.|.|.|.|.|+++|..+... .++.+........|.|.+++.+|+|.|+|.|
T Consensus 17 ~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 17 MYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp CEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEE
T ss_pred ecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEE
Confidence 456777 4566688999999999999999999999999999999866 3455555566789999999999999999999
Q ss_pred EcCCCceEEEEEEecCCCCcc---c---------------------------eeEEeC-----------------CeEEE
Q psy12422 265 TNSLGTAETKCKLTPLNSSNI---L---------------------------DLKYKN-----------------GVASL 297 (356)
Q Consensus 265 ~n~~g~~~~~~~l~p~~~~~~---~---------------------------~~~~~~-----------------~~~~L 297 (356)
.|..|.....+.+.....|.. . .+.|.. ....|
T Consensus 96 ~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l 175 (215)
T 3mtr_A 96 VNRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIV 175 (215)
T ss_dssp ECSSCEEEEEEEEEECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEE
T ss_pred EECCCceEEEEEEEECCCCCCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccE
Confidence 999999888777763221111 0 122221 01579
Q ss_pred EEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCC
Q psy12422 298 QIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPA 334 (356)
Q Consensus 298 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 334 (356)
.|.++...|.|.|+|.|.|..|....+..+.|+.+|.
T Consensus 176 ~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 176 TIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp EEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred EECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccc
Confidence 9999999999999999999999988887777777663
No 212
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.84 E-value=5.8e-20 Score=141.91 Aligned_cols=140 Identities=20% Similarity=0.331 Sum_probs=103.4
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCC--EEEEEEccCCCCCCeEEEEEEEc
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNG--VASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
+|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+............. ...|.|.+++.+|+|.|+|.|.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 3556667778899999999999999999999999999999998776555544443 46899999999999999999999
Q ss_pred CCCceE-EEEEEecCCCCcc---------------------------ceeEEeC----------CeEEEEEecCCCCCCe
Q psy12422 267 SLGTAE-TKCKLTPLNSSNI---------------------------LDLKYKN----------GVASLQIQEVFPEDEG 308 (356)
Q Consensus 267 ~~g~~~-~~~~l~p~~~~~~---------------------------~~~~~~~----------~~~~L~i~~v~~~d~G 308 (356)
..|... ..+.|.+..+|.+ ..+.|.. ....|.|.++ +|+|
T Consensus 82 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~--~d~G 159 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGV--TQST 159 (182)
T ss_dssp CTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEESSEEEEECCC--SSCE
T ss_pred CCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCCCceEEEEecc--ccCe
Confidence 877532 2333331111111 0345543 3568999988 5999
Q ss_pred EEEEEEEcCCcceEE-EEEEEEE
Q psy12422 309 VYVCTATNSLGTAET-KCKLTVR 330 (356)
Q Consensus 309 ~Y~C~a~n~~g~~~~-~~~l~V~ 330 (356)
.|+|.|.|..|...+ .+.|.|+
T Consensus 160 ~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 160 MFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEECCCCCcccceEEEEeC
Confidence 999999999998865 8888874
No 213
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.84 E-value=5.2e-20 Score=153.03 Aligned_cols=79 Identities=16% Similarity=0.211 Sum_probs=58.7
Q ss_pred CeecccCCceeecCCCeEEEEEEEcCCCCC------eEEEEEC--CEEcc------------CCCceeEEEeCCEEEEEE
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVKGDPEP------RVSWTKN--GQPLN------------SSNILDLKYKNGVASLQI 249 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p------~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~i 249 (356)
+.+...+....+.+|++++|.|.+.+.|.+ .+.|+|+ |..+. ...++.........+|+|
T Consensus 160 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 239 (291)
T 2gki_A 160 LVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTI 239 (291)
T ss_dssp CCEECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ceEEcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEE
Confidence 334444556789999999999999988876 8999995 22111 023444444556678999
Q ss_pred ccCCCCCCeEEEEEEEcCC
Q psy12422 250 QEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 250 ~~v~~~d~G~Y~C~a~n~~ 268 (356)
.+++.+|+|.|.|.|.|..
T Consensus 240 ~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 240 SSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp SSCCGGGCEEEEEEEEETT
T ss_pred CCCCHHHCEEEEEEEccCC
Confidence 9999999999999999854
No 214
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.84 E-value=4.2e-21 Score=152.71 Aligned_cols=66 Identities=18% Similarity=0.203 Sum_probs=50.1
Q ss_pred CCceEEEEEeccC---CC-CeeEEeeCCEEcccCCee--EEecCC----eEEEEEeeCCCCCCeEEEEEEEeCCce
Q psy12422 1 MQNVIKVKVGSTK---PP-PTVKWYKGNRELSKRDYS--MSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGT 66 (356)
Q Consensus 1 g~~v~l~C~~~g~---p~-~~v~W~k~g~~l~~~~~~--~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~ 66 (356)
|++++|.|.+.|. |+ +.|+|||+|..+...... ....++ ...|+|.+++.+|+|.|+|.|.|..+.
T Consensus 26 G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~ 101 (218)
T 2rgs_A 26 SLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLP 101 (218)
T ss_dssp TSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCS
T ss_pred CCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCC
Confidence 7899999999877 44 789999999887543211 112222 247999999999999999999998654
No 215
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.84 E-value=5.3e-20 Score=150.74 Aligned_cols=175 Identities=16% Similarity=0.203 Sum_probs=109.6
Q ss_pred CCceEEEEEeccCC------CCeeEEeeC--CEEcc-------------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEE
Q psy12422 1 MQNVIKVKVGSTKP------PPTVKWYKG--NRELS-------------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCV 59 (356)
Q Consensus 1 g~~v~l~C~~~g~p------~~~v~W~k~--g~~l~-------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 59 (356)
|++|+|.|.+.+.| .+.+.|||+ |..+. ..++.....++..+|+|.+++.+|+|.|.|.
T Consensus 20 G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 99 (264)
T 2gjj_A 20 GEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDLAVYYCQ 99 (264)
T ss_dssp TCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHCEEEEEE
Confidence 78999999998887 678999994 32211 2344444455667999999999999999999
Q ss_pred EEeCCcee-EEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeec
Q psy12422 60 ATNKHGTD-ETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTL 138 (356)
Q Consensus 60 a~n~~g~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (356)
+.|..+.. ...+.|.|...+.... +. .
T Consensus 100 ~~~~~~~~~~~~~~L~V~~~~~~~~-----------~~----------------------~------------------- 127 (264)
T 2gjj_A 100 QYSNYPWTFGGGTRLEIKRGGGGSG-----------GG----------------------G------------------- 127 (264)
T ss_dssp ECSSSSCEECCCEEEEEECC------------------------------------------------------------
T ss_pred EecCCccEecCCEEEEEEcCCcccc-----------cc----------------------c-------------------
Confidence 98875432 2334566654311000 00 0
Q ss_pred cccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCC
Q psy12422 139 SSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE 218 (356)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~ 218 (356)
.+. .. ... ....+.+.. +....+.+|++++|.|.+.+.|.
T Consensus 128 -------------------------------~~~--~~--~~~----~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~ 167 (264)
T 2gjj_A 128 -------------------------------SGG--GG--SGG----GGSEVQLQQ-SGPEVVKTGASVKISCKASGYSF 167 (264)
T ss_dssp --------------------------------------------------CCEEEE-CCCEEECTTCCEEEEEEEESSCG
T ss_pred -------------------------------ccc--cc--ccc----ccCcEEEeC-CCCEEEcCCCcEEEEEEEeCCcc
Confidence 000 00 000 001111212 22346889999999999998874
Q ss_pred --CeEEEEECC--EE---cc----C----------CCceeEEE--eCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 219 --PRVSWTKNG--QP---LN----S----------SNILDLKY--KNGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 219 --p~i~W~~~g--~~---~~----~----------~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
+.+.|+++. .. +. . ..++.+.. .....+|.|.+++.+|+|.|.|.|.|.
T Consensus 168 ~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 168 TGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp GGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 789999953 21 10 0 12333332 234679999999999999999999995
No 216
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.84 E-value=8.3e-21 Score=149.76 Aligned_cols=163 Identities=16% Similarity=0.188 Sum_probs=104.3
Q ss_pred CCceEEEEEeccCC---C-CeeEEeeCCEEcccCCe--eEEecCC----eEEEEEeeCCCCCCeEEEEEEEeCCceeEEE
Q psy12422 1 MQNVIKVKVGSTKP---P-PTVKWYKGNRELSKRDY--SMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTDETN 70 (356)
Q Consensus 1 g~~v~l~C~~~g~p---~-~~v~W~k~g~~l~~~~~--~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 70 (356)
|++++|.|.+.|.| . +.|+|||++..+..... .....++ ...|+|.+++.+|+|.|+|.|.|..+.....
T Consensus 18 G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~ 97 (207)
T 2vol_A 18 TLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIE 97 (207)
T ss_dssp TSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSSCEE
T ss_pred CCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCCceE
Confidence 79999999998874 2 48999999987753211 0112222 2479999999999999999999987643211
Q ss_pred EEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccC
Q psy12422 71 CVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNAT 150 (356)
Q Consensus 71 ~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (356)
..+.+..
T Consensus 98 ~~v~~~~------------------------------------------------------------------------- 104 (207)
T 2vol_A 98 KTISKTK------------------------------------------------------------------------- 104 (207)
T ss_dssp EEECCCC-------------------------------------------------------------------------
T ss_pred EEeccCC-------------------------------------------------------------------------
Confidence 1111000
Q ss_pred CCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCC-CC-CeEEEEECCE
Q psy12422 151 SPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGD-PE-PRVSWTKNGQ 228 (356)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~-p~i~W~~~g~ 228 (356)
....+|.+...+......+|+.+.|.|.+.|. |+ +.|.|++||.
T Consensus 105 ----------------------------------~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~ 150 (207)
T 2vol_A 105 ----------------------------------GRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQ 150 (207)
T ss_dssp ----------------------------------CCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ----------------------------------CCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCE
Confidence 00223433322222123368999999999884 54 3899999999
Q ss_pred EccCCCceeEE-EeCC----EEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 229 PLNSSNILDLK-YKNG----VASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 229 ~~~~~~~~~~~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
.+......... ..++ .+.|.|.....+|.|.|+|.|.|....
T Consensus 151 ~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 151 PAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp ECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred eccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 87543211111 1122 134677777777899999999998764
No 217
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.84 E-value=4e-22 Score=160.54 Aligned_cols=162 Identities=15% Similarity=0.167 Sum_probs=91.6
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--EEc-----------c--cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--REL-----------S--KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHG 65 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~~l-----------~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 65 (356)
|++|+|.|.+.+.|.+.|.|||++ ..+ . ..++.....++..+|+|.+++.+|+|.|.|.+.|..+
T Consensus 38 G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 117 (233)
T 3bqu_C 38 GEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLP 117 (233)
T ss_dssp ---CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEEECSSSS
T ss_pred CCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEEEecCCc
Confidence 789999999998888899999953 211 0 1122222233455899999999999999999988654
Q ss_pred eeE-EEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccc
Q psy12422 66 TDE-TNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSS 144 (356)
Q Consensus 66 ~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (356)
... ....|.|...
T Consensus 118 ~~~~~~~~l~V~~~------------------------------------------------------------------ 131 (233)
T 3bqu_C 118 YTFGGGTNLEIKRA------------------------------------------------------------------ 131 (233)
T ss_dssp CCBCCCCBC---CC------------------------------------------------------------------
T ss_pred eeecCCEEEEEeCC------------------------------------------------------------------
Confidence 211 1111222110
Q ss_pred cccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCC-CCC-eEE
Q psy12422 145 STNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGD-PEP-RVS 222 (356)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~p-~i~ 222 (356)
..+|.+...+....+.+|+.++|.|.+.|. |++ .+.
T Consensus 132 ------------------------------------------~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~ 169 (233)
T 3bqu_C 132 ------------------------------------------DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVK 169 (233)
T ss_dssp ------------------------------------------CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEE
T ss_pred ------------------------------------------CCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEE
Confidence 123444432222233469999999999885 443 699
Q ss_pred EEECCEEccCC-Ccee-EEE-eC----CEEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 223 WTKNGQPLNSS-NILD-LKY-KN----GVASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 223 W~~~g~~~~~~-~~~~-~~~-~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
|+++|..+... .... ... .+ ..+.|.|..+..+|+|.|+|.|.|....
T Consensus 170 W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 170 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp EEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred EEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 99999887654 1110 000 11 1247999999999999999999998654
No 218
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.84 E-value=3.9e-20 Score=144.78 Aligned_cols=127 Identities=16% Similarity=0.145 Sum_probs=94.5
Q ss_pred ceeecCCCeEEEEEE---EcCCCCCeEEEEECCEEccC-----------------CCceeEEEeCCEEEEEEccCCCCCC
Q psy12422 198 DKTIDDGQCLDLSAV---VKGDPEPRVSWTKNGQPLNS-----------------SNILDLKYKNGVASLQIQEVFPEDE 257 (356)
Q Consensus 198 ~~~v~~g~~~~l~C~---~~g~p~p~i~W~~~g~~~~~-----------------~~~~~~~~~~~~~~L~i~~v~~~d~ 257 (356)
.+++..|++++|.|. +.+.|.|.|+|+|+|..+.. ...+......+...|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 457889999999996 46789999999997643211 1223344556678999999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEecCCCCccc--------------------------eeEEeC------------------C
Q psy12422 258 GVYVCTATNSLGTAETKCKLTPLNSSNIL--------------------------DLKYKN------------------G 293 (356)
Q Consensus 258 G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~--------------------------~~~~~~------------------~ 293 (356)
|.|+|.|.|..|.....+.|.+..++.+. .+.|.. .
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~ 161 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEK 161 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECT
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeC
Confidence 99999999999988887777632221111 445532 1
Q ss_pred e---EEEEEecCCCCCCeEEEEEEEcCCcceEEE
Q psy12422 294 V---ASLQIQEVFPEDEGVYVCTATNSLGTAETK 324 (356)
Q Consensus 294 ~---~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 324 (356)
+ ..|.|.++..+|+|.|+|.|+|..|+++..
T Consensus 162 ~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 162 DGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp TSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred CCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 1 335567899999999999999999998864
No 219
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.83 E-value=2.4e-20 Score=170.45 Aligned_cols=76 Identities=21% Similarity=0.375 Sum_probs=58.9
Q ss_pred CCceEEEEEe-ccCCCCeeEEeeCCEEccc------------CCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCcee
Q psy12422 1 MQNVIKVKVG-STKPPPTVKWYKGNRELSK------------RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD 67 (356)
Q Consensus 1 g~~v~l~C~~-~g~p~~~v~W~k~g~~l~~------------~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 67 (356)
|++|+|.|.+ .+.|.+.|+|||++..+.. ..+.....++ +|.|.+++.+|+|.|+|.+.|..|..
T Consensus 381 G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~L~i~~v~~~D~G~Y~C~~~n~~~~~ 458 (581)
T 3o3u_N 381 GEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG--SLFLPAVGIQDEGIFRCQAMNRNGKE 458 (581)
T ss_dssp TSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS--CEEESSCCGGGCEEEEEEEECTTSCE
T ss_pred CCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc--eEEEeccccccCeEEEEEEEcCCCce
Confidence 7899999999 8899999999998753211 1111223334 79999999999999999999998887
Q ss_pred -EEEEEEEEecc
Q psy12422 68 -ETNCVVIVESE 78 (356)
Q Consensus 68 -~~~~~l~v~~~ 78 (356)
...+.|.|..+
T Consensus 459 ~~~~~~l~V~~~ 470 (581)
T 3o3u_N 459 TKSNYRVRVYQI 470 (581)
T ss_dssp EEEEEEEEEEBC
T ss_pred eEEEEEEEEEcC
Confidence 66778877643
No 220
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.83 E-value=1.4e-20 Score=147.92 Aligned_cols=140 Identities=16% Similarity=0.218 Sum_probs=103.8
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCe-EEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPR-VSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
...|.+...+....+.+|+++.|.|.+.+.|.+. +.|+++|..+.... ..|.|.+++.+|+|.|+|.|.
T Consensus 5 ~p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~ 74 (204)
T 3sgj_C 5 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQ 74 (204)
T ss_dssp -CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEET
T ss_pred CCCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeC
Confidence 4557777777778899999999999999998876 99999999876542 389999999999999999999
Q ss_pred cCCCceEEEEEEecC----CCCc--------------------cceeEEeC---------CeEEEEEecCCCCCCeEEEE
Q psy12422 266 NSLGTAETKCKLTPL----NSSN--------------------ILDLKYKN---------GVASLQIQEVFPEDEGVYVC 312 (356)
Q Consensus 266 n~~g~~~~~~~l~p~----~~~~--------------------~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C 312 (356)
|........+.+... ..+. ...+.|.+ ....|.|.+++.+|+|.|+|
T Consensus 75 n~~~s~~~~l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~D~G~Y~C 154 (204)
T 3sgj_C 75 LSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFC 154 (204)
T ss_dssp TSBCCCCEEEEEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEE
T ss_pred CCcccccEEEEEecCceEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCcccCEEEEE
Confidence 976665555555410 0000 01344543 34679999999999999999
Q ss_pred EEEc-CCcceEEEEEEEEEecCCCC
Q psy12422 313 TATN-SLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 313 ~a~n-~~g~~~~~~~l~V~~~p~~~ 336 (356)
.|.| ..+..+..+.|.|+++|..+
T Consensus 155 ~a~n~~~~~~s~~~~l~V~~~~~~P 179 (204)
T 3sgj_C 155 RGLVGSKNVSSETVQITITQGLAVS 179 (204)
T ss_dssp EEEETTEEEECCCEEEEEEC-----
T ss_pred EEEeCCCceecCcEEEEEeCcCCCC
Confidence 9999 44455668899999877543
No 221
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.83 E-value=2.4e-19 Score=139.57 Aligned_cols=142 Identities=21% Similarity=0.309 Sum_probs=105.7
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCC-CCeEEEEE-CCEEccC-CCceeEE-EeCCEEEEEEccCCCCCCeEEEEEE
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDP-EPRVSWTK-NGQPLNS-SNILDLK-YKNGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p-~p~i~W~~-~g~~~~~-~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
|+.+...+.+..+.+|+++.|.|.+.+.| .+.+.|++ +|..+.. ..++... .......|.|.+++.+|+|.|+|.|
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 45566677788999999999999999887 78899999 8887763 3333332 2356789999999999999999999
Q ss_pred EcCCC-ceEEEEEEecCCCCccc--------------------------eeEEeC----------------CeEEEEEec
Q psy12422 265 TNSLG-TAETKCKLTPLNSSNIL--------------------------DLKYKN----------------GVASLQIQE 301 (356)
Q Consensus 265 ~n~~g-~~~~~~~l~p~~~~~~~--------------------------~~~~~~----------------~~~~L~i~~ 301 (356)
.|..+ .....+.+....++.+. .+.|.. .++.|.|.+
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRG 161 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETT
T ss_pred EcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECC
Confidence 99984 45555555422111110 445532 223799999
Q ss_pred CCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy12422 302 VFPEDEGVYVCTATNSLGTAETKCKLTVR 330 (356)
Q Consensus 302 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 330 (356)
++.+|+|.|+|.|.|..|.......+.|.
T Consensus 162 ~~~~d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 162 IKKTDEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp CCGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred CChhhCEEEEEEEEEecceeEEEEEEEEe
Confidence 99999999999999999877776666664
No 222
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.83 E-value=2.7e-20 Score=129.59 Aligned_cols=95 Identities=34% Similarity=0.544 Sum_probs=87.2
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..||.|...+.++.+.+|+++.|.|.+.|+|.|.|.|+|||..+....++.+..++...+|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 45788888889999999999999999999999999999999999988888888888888999999999999999999999
Q ss_pred CCCceEEEEEEecCC
Q psy12422 267 SLGTAETKCKLTPLN 281 (356)
Q Consensus 267 ~~g~~~~~~~l~p~~ 281 (356)
..|....++.|.+..
T Consensus 91 ~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 91 AAGEAYAAAAVTVLE 105 (107)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCEEEEEEEEEEEc
Confidence 999999988887544
No 223
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.83 E-value=3.3e-20 Score=147.36 Aligned_cols=171 Identities=15% Similarity=0.196 Sum_probs=103.9
Q ss_pred CCceEEEEEeccC--CCCeeEEeeCC--EE---c--------------ccCCeeEEecCCeEEEEEeeCCCCCCeEEEEE
Q psy12422 1 MQNVIKVKVGSTK--PPPTVKWYKGN--RE---L--------------SKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCV 59 (356)
Q Consensus 1 g~~v~l~C~~~g~--p~~~v~W~k~g--~~---l--------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 59 (356)
|++|+|.|.+.+. +.+.+.|||.. .. + ...++.....++.++|+|.+++.+|+|.|.|.
T Consensus 14 G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 93 (215)
T 3nl4_H 14 GTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDTATYFCV 93 (215)
T ss_dssp TCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccCEEEEEE
Confidence 7999999999763 46789999832 11 1 01234444456677899999999999999999
Q ss_pred EEeCCce----eEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEE
Q psy12422 60 ATNKHGT----DETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQM 135 (356)
Q Consensus 60 a~n~~g~----~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~ 135 (356)
+.|..+. ......|.|....
T Consensus 94 ~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------------------------- 117 (215)
T 3nl4_H 94 RKYGSEWGGDLWGPGTLVTVSSGQ-------------------------------------------------------- 117 (215)
T ss_dssp EECSSSSCEEEECCCEEEEECSSC--------------------------------------------------------
T ss_pred EecCCCccceEEcCCEEEEEeCCC--------------------------------------------------------
Confidence 9987542 1222344443110
Q ss_pred eeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC
Q psy12422 136 STLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG 215 (356)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g 215 (356)
..+|.+...+....+.+|+.++|.|.+.+
T Consensus 118 ---------------------------------------------------~~~P~i~~~~~~~~~~~g~~v~l~C~~~~ 146 (215)
T 3nl4_H 118 ---------------------------------------------------PKAPSVFPLAPCCGDTPSSTVTLGCLVKG 146 (215)
T ss_dssp ---------------------------------------------------CBCCEEEEECCCTTCCC--CEEEEEEEEE
T ss_pred ---------------------------------------------------cCCCEEEEecCCccccCCCcEEEEEEEee
Confidence 12233332222224567999999999988
Q ss_pred CCCC--eEEEEECCEEccCCCceeEEEeCCE-EEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEec
Q psy12422 216 DPEP--RVSWTKNGQPLNSSNILDLKYKNGV-ASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 216 ~p~p--~i~W~~~g~~~~~~~~~~~~~~~~~-~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
.|++ .+.|+++|..+...........++. .......+...| |.|+|.|.|..+.......+.+
T Consensus 147 ~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~~ 212 (215)
T 3nl4_H 147 YLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVAP 212 (215)
T ss_dssp EBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECCS
T ss_pred eeCCCeEEEEeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecCC
Confidence 6543 4779999875532211111222221 111224566677 9999999999998887777654
No 224
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.83 E-value=6.8e-20 Score=142.37 Aligned_cols=142 Identities=22% Similarity=0.360 Sum_probs=101.4
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++..+.......+.... ...|.|.+++.+|+|.|+|.+.|..
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~~~~~~ 80 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA-NNNLQILNINKSDEGIYRCEGRVEA 80 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECT-TSCEEETTCCGGGCEEEEEEEEETT
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEec-CCCEEEeeCCHhHCcEEEEEEEEcC
Confidence 567777778889999999999999999999999999998877643222222221 1369999999999999999999998
Q ss_pred CceEE--EEEEe----cC--CCC---ccc-------------------eeEEeC---------------CeEEEEEecCC
Q psy12422 269 GTAET--KCKLT----PL--NSS---NIL-------------------DLKYKN---------------GVASLQIQEVF 303 (356)
Q Consensus 269 g~~~~--~~~l~----p~--~~~---~~~-------------------~~~~~~---------------~~~~L~i~~v~ 303 (356)
+.... .+.+. |. ..+ ... .+.|.. ....|.|.+++
T Consensus 81 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~ 160 (189)
T 2v5t_A 81 RGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNII 160 (189)
T ss_dssp TTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCC
T ss_pred CCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCC
Confidence 65432 22222 11 000 000 344432 24579999999
Q ss_pred CCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 304 PEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 304 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 161 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 161 NSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred hhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 9999999999999999999999998864
No 225
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.83 E-value=3.9e-19 Score=137.86 Aligned_cols=73 Identities=12% Similarity=0.094 Sum_probs=59.9
Q ss_pred CCceEEEEEeccCCCC--eeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPP--TVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~--~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+ |.|.| .|+|++.+..+ .+ .....+...|.|.+++.+|+|.|.|.|.|..+.....+.|.|..+
T Consensus 22 G~sv~L~C~a-~~p~P~~~i~W~~~~~~l--~~--~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~~ 96 (210)
T 1gsm_A 22 GASRQLTCRL-ACADRGASVQWRGLDTSL--GA--VQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAF 96 (210)
T ss_dssp TCCEEEEEEE-CCSSTTCEEEEESSTTTT--CC--EEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred CCCEEEEEEC-CCCCCCcceEEeeccccc--Cc--EEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEec
Confidence 7899999999 88888 99999965544 22 222345568999999999999999999999988888888888754
No 226
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.82 E-value=3.8e-19 Score=142.79 Aligned_cols=79 Identities=14% Similarity=0.262 Sum_probs=54.2
Q ss_pred ecCC-CeEEEEEEEcCC-CCC-eEEEEE-CCEEccCCCceeEEEeCC----EEEEEEccCCC--CCCeEEEEEEEcCCCc
Q psy12422 201 IDDG-QCLDLSAVVKGD-PEP-RVSWTK-NGQPLNSSNILDLKYKNG----VASLQIQEVFP--EDEGVYVCTATNSLGT 270 (356)
Q Consensus 201 v~~g-~~~~l~C~~~g~-p~p-~i~W~~-~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~--~d~G~Y~C~a~n~~g~ 270 (356)
+.+| +.++|.|.+.|. |.| .+.|++ ||..+............+ .+.|.|..... +|.|.|+|.|.|..+.
T Consensus 137 ~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~ 216 (232)
T 1dn0_B 137 SPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGN 216 (232)
T ss_dssp ----CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCC
T ss_pred cCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCC
Confidence 4578 899999999875 776 899999 998775410000000112 24689999887 8899999999999998
Q ss_pred eEEEEEEec
Q psy12422 271 AETKCKLTP 279 (356)
Q Consensus 271 ~~~~~~l~p 279 (356)
......+.+
T Consensus 217 ~~~~~~i~~ 225 (232)
T 1dn0_B 217 KEKNVPLPV 225 (232)
T ss_dssp EEEEEECCC
T ss_pred cceeEecCC
Confidence 877776653
No 227
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.82 E-value=1.5e-19 Score=148.48 Aligned_cols=77 Identities=18% Similarity=0.193 Sum_probs=53.5
Q ss_pred CCceEEEEEeccCC-----CCeeEEeeC--CEE---cc----------cCCeeEEecCCeEEEEEeeCCCCCCeEEEEEE
Q psy12422 1 MQNVIKVKVGSTKP-----PPTVKWYKG--NRE---LS----------KRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVA 60 (356)
Q Consensus 1 g~~v~l~C~~~g~p-----~~~v~W~k~--g~~---l~----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 60 (356)
|++|+|.|.+.+.| .+.+.|||+ |.. +. ..++.....++..+|+|.+++.+|+|.|.|.+
T Consensus 30 G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 109 (268)
T 1x9q_A 30 GDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDLGVYFCSQ 109 (268)
T ss_dssp TCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHCEEEEEEE
Confidence 78999999998887 478999995 221 10 23444444556679999999999999999999
Q ss_pred EeCCcee-EEEEEEEEec
Q psy12422 61 TNKHGTD-ETNCVVIVES 77 (356)
Q Consensus 61 ~n~~g~~-~~~~~l~v~~ 77 (356)
.|..+.. .....|.|..
T Consensus 110 ~~~~~~~~~~~~~L~V~~ 127 (268)
T 1x9q_A 110 STHVPWTFGGGTKLEIKS 127 (268)
T ss_dssp CSSSSCEECCCEEEC---
T ss_pred ecCCCceEcCCEEEEEcc
Confidence 9875432 2234555543
No 228
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.82 E-value=2.8e-19 Score=141.57 Aligned_cols=131 Identities=20% Similarity=0.305 Sum_probs=106.5
Q ss_pred cCCCeEEEEEEEcCC-CCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 202 DDGQCLDLSAVVKGD-PEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 202 ~~g~~~~l~C~~~g~-p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
-.++.+.|.|.+.++ |.+.+.|+++|..+....++.+...++...|.|.+++.+|+|.|+|.|.|..|.....+.+...
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 367888999999885 5788999999999998888887778887889999999999999999999999888777776311
Q ss_pred C--------------------C-------Cc-cc-------------------eeEEeC------------------CeE
Q psy12422 281 N--------------------S-------SN-IL-------------------DLKYKN------------------GVA 295 (356)
Q Consensus 281 ~--------------------~-------~~-~~-------------------~~~~~~------------------~~~ 295 (356)
. . +. +. .+.|.+ ...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 0 0 00 00 344432 234
Q ss_pred EEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy12422 296 SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRST 332 (356)
Q Consensus 296 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 332 (356)
.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..|
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 8999999999999999999999999999999999865
No 229
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.82 E-value=4.7e-20 Score=141.62 Aligned_cols=139 Identities=20% Similarity=0.230 Sum_probs=104.8
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCC-eEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEP-RVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
..+|.+...+....+.+|+++.|.|.+.+.|.+ .+.|++++..+... ...|.|.+++.+|+|.|+|.+.
T Consensus 2 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~ 71 (176)
T 1f2q_A 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQ 71 (176)
T ss_dssp --CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECT
T ss_pred CCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcC
Confidence 356777777877889999999999999998876 59999999887642 2389999999999999999999
Q ss_pred cCCCceEEEEEEecCC-----CCc-------------------cceeEEeC---------CeEEEEEecCCCCCCeEEEE
Q psy12422 266 NSLGTAETKCKLTPLN-----SSN-------------------ILDLKYKN---------GVASLQIQEVFPEDEGVYVC 312 (356)
Q Consensus 266 n~~g~~~~~~~l~p~~-----~~~-------------------~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C 312 (356)
|..+.....+.+.+.. ... ...+.|.+ ....|.|.+++.+|+|.|+|
T Consensus 72 ~~~~s~~~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C 151 (176)
T 1f2q_A 72 QVNESEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYC 151 (176)
T ss_dssp TSSCCCCEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGGGCEEEEE
T ss_pred CccccccEEEEEeCcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCcccCEEEEE
Confidence 9887766666654110 000 01445543 35689999999999999999
Q ss_pred EEEcCCcc-eEEEEEEEEEecCCC
Q psy12422 313 TATNSLGT-AETKCKLTVRSTPAA 335 (356)
Q Consensus 313 ~a~n~~g~-~~~~~~l~V~~~p~~ 335 (356)
.|.|..+. .+..+.|.|.++|..
T Consensus 152 ~a~n~~~~~~s~~~~l~V~~~p~~ 175 (176)
T 1f2q_A 152 TGKVWQLDYESEPLNITVIKAPRE 175 (176)
T ss_dssp EEEETTEEEECCCEEEEEECSCC-
T ss_pred EEEeCCcceEecCEEEEEecCCCC
Confidence 99997554 445789999999864
No 230
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.82 E-value=3.3e-19 Score=151.03 Aligned_cols=231 Identities=12% Similarity=0.078 Sum_probs=120.0
Q ss_pred ccccccCccceeeeccc---CCceeeecccccccCCccccC---CCCceEEEEeec--cccccccccccCCCccceeeee
Q psy12422 89 HNFLYSGDRKYIEKHIR---PAPAIITTRQEIKSSYSSHTD---DTGRTTTQMSTL--SSNYSSSTNNATSPSKKITRRM 160 (356)
Q Consensus 89 ~~~~~~g~~~~l~c~~~---p~p~i~w~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
...+.+|+.+.|.|.+. |.+.+.|++++.......... ...+........ ......+........+.+.|.|
T Consensus 12 ~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 91 (327)
T 2wng_A 12 SVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYC 91 (327)
T ss_dssp EEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEE
T ss_pred ceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEE
Confidence 44678999999999987 556799999765422100000 000100000000 0011111222233334444444
Q ss_pred eccccCCCCC-cccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCCCC--eEEEEECCEEccCCCcee
Q psy12422 161 NSILDTDSPS-RSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEP--RVSWTKNGQPLNSSNILD 237 (356)
Q Consensus 161 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p--~i~W~~~g~~~~~~~~~~ 237 (356)
......+... ........+.+.. ...+|.+. .+ ...+.+|+.+.|.|.+.|.|+| .+.|+++|..+.......
T Consensus 92 ~a~n~~~~~~~~~~~~~~~l~V~~--~p~~p~i~-~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~ 167 (327)
T 2wng_A 92 VKFRKGSPDTEFKSGAGTELSVRA--KPSAPVVS-GP-AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNV 167 (327)
T ss_dssp EEEESSTTCEEEEECCCEEEEEEB--CCCCCEEE-CC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEE
T ss_pred EeecCCCcceeEeecCcEEEEEEe--cCCCceee-cc-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccccccc
Confidence 4333211100 0111222333311 12334443 22 3568899999999999988876 899999999987543211
Q ss_pred EEE-eCC----EEEEEEccCCCCCCeEEEEEEEcCCCce---EEEEEEe--cCCCC------------------------
Q psy12422 238 LKY-KNG----VASLQIQEVFPEDEGVYVCTATNSLGTA---ETKCKLT--PLNSS------------------------ 283 (356)
Q Consensus 238 ~~~-~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~---~~~~~l~--p~~~~------------------------ 283 (356)
... ..+ .+.|.|.....+|.|.|+|.|.|..+.. ..+..+. ...+|
T Consensus 168 ~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C~~~g~ 247 (327)
T 2wng_A 168 DPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKF 247 (327)
T ss_dssp ECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEEEEEEE
T ss_pred ccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCCcCCCCcEEEEEEEccc
Confidence 111 111 2368888788778999999999988763 3333332 00001
Q ss_pred --ccceeEEeCC----------------------eEEEEEecCCCCCCeEEEEEEEcCCcceEE
Q psy12422 284 --NILDLKYKNG----------------------VASLQIQEVFPEDEGVYVCTATNSLGTAET 323 (356)
Q Consensus 284 --~~~~~~~~~~----------------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 323 (356)
....+.|.++ .+.|.|..+..+|+|.|+|.|.|..|....
T Consensus 248 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s 311 (327)
T 2wng_A 248 YPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVS 311 (327)
T ss_dssp BSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEE
T ss_pred cCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCch
Confidence 0002444321 145888889999999999999999987644
No 231
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.82 E-value=3.7e-19 Score=139.81 Aligned_cols=142 Identities=17% Similarity=0.117 Sum_probs=99.5
Q ss_pred cCCceeecCCCeEEEEEEEcCCCC-----CeEEEEE-CCEEccCCCceeEEEe---CCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 195 KLTDKTIDDGQCLDLSAVVKGDPE-----PRVSWTK-NGQPLNSSNILDLKYK---NGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 195 ~~~~~~v~~g~~~~l~C~~~g~p~-----p~i~W~~-~g~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
++..+.+.+|+++.|.|.+.+.|. +.+.|++ ++.......+..+..+ .+...|.|.+++.+|+|.|+|.|.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 335678999999999999999887 8899999 5444433334333222 255799999999999999999999
Q ss_pred cCCCceEEEEEEecCCC---Cccc----------------------eeEEeC---------------CeEEEEEecCCCC
Q psy12422 266 NSLGTAETKCKLTPLNS---SNIL----------------------DLKYKN---------------GVASLQIQEVFPE 305 (356)
Q Consensus 266 n~~g~~~~~~~l~p~~~---~~~~----------------------~~~~~~---------------~~~~L~i~~v~~~ 305 (356)
|..+.....+.|.+... +.+. .+.|.. ....+.|.+++.+
T Consensus 88 ~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~ 167 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKPQ 167 (202)
T ss_dssp ETTEEEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEECCC
T ss_pred eCCCcceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEEEcC
Confidence 99987777666652211 1110 445543 1256778899999
Q ss_pred CCeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 306 DEGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 306 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
|+|.|+|.|.|..|..+..+.|.|..+..+.
T Consensus 168 d~G~Y~C~a~N~~g~~~~~~~l~v~~~~~p~ 198 (202)
T 3bp6_B 168 PSRNFSCMFWNAHMKELTSAIIDPLSRMEPK 198 (202)
T ss_dssp TTCCEEEEEEETTTTEEEEEEECC-------
T ss_pred CCCEEEEEEEcCCcccccEEEEEecCcCCCC
Confidence 9999999999999999999998887665433
No 232
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.82 E-value=4.1e-20 Score=146.41 Aligned_cols=153 Identities=27% Similarity=0.466 Sum_probs=105.4
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCc----eeEEEeCC-E--EEEEEccCCCCCCeE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNI----LDLKYKNG-V--ASLQIQEVFPEDEGV 259 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~----~~~~~~~~-~--~~L~i~~v~~~d~G~ 259 (356)
..+|.+...+....+.+|+.+.|.|.+.++|.+.+.|+++|..+..... .......+ . ..|.|.+++.+|+|.
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 5678888888889999999999999999999999999999998864321 11122222 1 124556779999999
Q ss_pred EEEEEEcCCCceE-EEEEEe----cCC----CCccc--------------------eeEEeC--------------CeEE
Q psy12422 260 YVCTATNSLGTAE-TKCKLT----PLN----SSNIL--------------------DLKYKN--------------GVAS 296 (356)
Q Consensus 260 Y~C~a~n~~g~~~-~~~~l~----p~~----~~~~~--------------------~~~~~~--------------~~~~ 296 (356)
|+|.|.|..|... ..+.+. |.. +.... .+.|.. ..+.
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~ 166 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGK 166 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTE
T ss_pred EEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCe
Confidence 9999999987652 222222 110 00000 444533 1247
Q ss_pred EEEecCCCCCCeEEEEEEEcCCcceEE-EEEEEEEecCCCCCCC
Q psy12422 297 LQIQEVFPEDEGVYVCTATNSLGTAET-KCKLTVRSTPAANLGK 339 (356)
Q Consensus 297 L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~~~~~~ 339 (356)
|.|.+++.+|+|.|+|.|.|..|.... .+.|.|.++|.+...|
T Consensus 167 L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~P 210 (212)
T 2v9r_A 167 LMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAA 210 (212)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--------
T ss_pred EEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhhhc
Confidence 999999999999999999999998776 5899999999887554
No 233
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.82 E-value=3e-19 Score=144.35 Aligned_cols=75 Identities=21% Similarity=0.316 Sum_probs=54.8
Q ss_pred CceeecCCCeEEEEEEEcC-CCCC-eEEEEECCEEccCCCcee---EEEeCCE----EEEEEccCCCCC-CeEEEEEEEc
Q psy12422 197 TDKTIDDGQCLDLSAVVKG-DPEP-RVSWTKNGQPLNSSNILD---LKYKNGV----ASLQIQEVFPED-EGVYVCTATN 266 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g-~p~p-~i~W~~~g~~~~~~~~~~---~~~~~~~----~~L~i~~v~~~d-~G~Y~C~a~n 266 (356)
....+.+|+.++|.|.+.| +|.+ .+.|+++|..+....... ....++. +.|.|.....+| .|.|+|.|.|
T Consensus 130 ~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~ 209 (240)
T 3q5y_A 130 SKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQF 209 (240)
T ss_dssp CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEE
T ss_pred chhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEc
Confidence 3445667999999999988 6666 699999999986543221 1222332 359999999998 7799999999
Q ss_pred CCCce
Q psy12422 267 SLGTA 271 (356)
Q Consensus 267 ~~g~~ 271 (356)
.....
T Consensus 210 ~~~~~ 214 (240)
T 3q5y_A 210 HGLSE 214 (240)
T ss_dssp CCBCT
T ss_pred CCCCC
Confidence 87643
No 234
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.82 E-value=2.2e-19 Score=142.76 Aligned_cols=148 Identities=27% Similarity=0.466 Sum_probs=106.5
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCc--eeEEEeCCE--EEEEEccCCCCCCeEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNI--LDLKYKNGV--ASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~--~~~~~~~~~--~~L~i~~v~~~d~G~Y~C 262 (356)
..+|.+...+....+.+|+++.|.|.+.|+|.+.+.|+++|..+..... .......+. ..|.|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 6788999888889999999999999999999999999999998876421 222222221 223788999999999999
Q ss_pred EEEcCCCceE---EEEEEec--CC---CC-cc--------------------ceeEEeC---------------------
Q psy12422 263 TATNSLGTAE---TKCKLTP--LN---SS-NI--------------------LDLKYKN--------------------- 292 (356)
Q Consensus 263 ~a~n~~g~~~---~~~~l~p--~~---~~-~~--------------------~~~~~~~--------------------- 292 (356)
.|.|..|... ..+.+.. .. .+ .. ..+.|..
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~ 166 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI 166 (217)
T ss_dssp EEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEE
T ss_pred EEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEe
Confidence 9999988653 2333321 10 00 00 0344432
Q ss_pred -CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCC
Q psy12422 293 -GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPA 334 (356)
Q Consensus 293 -~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 334 (356)
..+.|.|.+++.+|+|.|+|.|.|..|..+.++.+.+....+
T Consensus 167 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~~~ 209 (217)
T 2vr9_A 167 VDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKA 209 (217)
T ss_dssp ETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC---
T ss_pred cCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEeeh
Confidence 124799999999999999999999999998876665655443
No 235
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.81 E-value=1.6e-19 Score=138.43 Aligned_cols=136 Identities=15% Similarity=0.213 Sum_probs=105.0
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCe-EEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPR-VSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
..+|.+...+....+.+|+++.|.|.+.+.|.+. +.|+++|..+... ...|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~----------~~~L~i~~~~~~d~G~Y~C~~~ 74 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ----------ASSYFIDAATVNDSGEYRCQTN 74 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS----------CSEEEESSCCGGGCEEEEEECS
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC----------ceEEEEeCCCcccCEEEEEEee
Confidence 5668888888878899999999999999998777 8999999877532 2389999999999999999999
Q ss_pred cCCCceEEEEEEecCC----CCc--------------------cceeEEeC---------CeEEEEEecCCCCCCeEEEE
Q psy12422 266 NSLGTAETKCKLTPLN----SSN--------------------ILDLKYKN---------GVASLQIQEVFPEDEGVYVC 312 (356)
Q Consensus 266 n~~g~~~~~~~l~p~~----~~~--------------------~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C 312 (356)
|..+.....+.+.+.. .+. ...+.|.+ ....|.|.+++.+|+|.|+|
T Consensus 75 n~~~s~~~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C 154 (175)
T 1fnl_A 75 LSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFC 154 (175)
T ss_dssp SSCCCCCEEEEEECSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEE
T ss_pred CCcccccEEEEEeCCCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccChhhCeEEEE
Confidence 9877666655554110 000 01444443 34579999999999999999
Q ss_pred EEEcCCcc-eEEEEEEEEEec
Q psy12422 313 TATNSLGT-AETKCKLTVRST 332 (356)
Q Consensus 313 ~a~n~~g~-~~~~~~l~V~~~ 332 (356)
.|.|..|. .+..+.|.|.++
T Consensus 155 ~a~n~~~~~~s~~~~l~V~~~ 175 (175)
T 1fnl_A 155 RGLVGSKNVSSETVNITITQA 175 (175)
T ss_dssp EEEETTEEEECCCEEEEEECC
T ss_pred EEEcCCCCccCccEEEEEeCC
Confidence 99997664 455888888764
No 236
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.81 E-value=2e-19 Score=146.74 Aligned_cols=81 Identities=16% Similarity=0.294 Sum_probs=55.6
Q ss_pred eecCCCeEEEEEEEcCC-CCC-eEEEEECCEEccCCCceeEEEeC---CEEEEEEccCCCCCCeEEEEEEEcCCCceEEE
Q psy12422 200 TIDDGQCLDLSAVVKGD-PEP-RVSWTKNGQPLNSSNILDLKYKN---GVASLQIQEVFPEDEGVYVCTATNSLGTAETK 274 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g~-p~p-~i~W~~~g~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 274 (356)
.+.+|+.++|.|.+.+. |.| .|.|++++..+...........+ ..+.|.|..+..+| |.|+|.|.|........
T Consensus 140 ~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~ 218 (261)
T 2xqy_G 140 GDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD 218 (261)
T ss_dssp C--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred cccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEE
Confidence 35679999999999874 776 89999988765311000011111 12579999999888 99999999988877777
Q ss_pred EEEecCC
Q psy12422 275 CKLTPLN 281 (356)
Q Consensus 275 ~~l~p~~ 281 (356)
..+.+..
T Consensus 219 ~~~~~~~ 225 (261)
T 2xqy_G 219 KKIEPRA 225 (261)
T ss_dssp EECCCC-
T ss_pred EEecccc
Confidence 6666543
No 237
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.81 E-value=1.5e-19 Score=143.38 Aligned_cols=138 Identities=20% Similarity=0.331 Sum_probs=103.1
Q ss_pred CCceeecCCCeEEEEEEEcCCC----CCeEEEEE----------------CCEEccC-----CCceeEEE---eCCEEEE
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDP----EPRVSWTK----------------NGQPLNS-----SNILDLKY---KNGVASL 247 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p----~p~i~W~~----------------~g~~~~~-----~~~~~~~~---~~~~~~L 247 (356)
+..+.+.+|+++.|.|.+.+.| .+.+.|++ ++..+.. ..+..+.. ..+..+|
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 3567899999999999998877 46899998 4443331 22222211 1134579
Q ss_pred EEccCCCCCCeEEEEEEEcCCCceEEEEEEecCCCCccc---------------------------eeEEeC--------
Q psy12422 248 QIQEVFPEDEGVYVCTATNSLGTAETKCKLTPLNSSNIL---------------------------DLKYKN-------- 292 (356)
Q Consensus 248 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~~---------------------------~~~~~~-------- 292 (356)
.|.+++.+|+|.|+|.|.|..|.....+.|.+...+.+. .+.|..
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~ 166 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMP 166 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCC
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccC
Confidence 999999999999999999999887777766632222111 445543
Q ss_pred -------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecC
Q psy12422 293 -------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTP 333 (356)
Q Consensus 293 -------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 333 (356)
....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..||
T Consensus 167 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 167 TPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp GGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCCC
T ss_pred ccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCCC
Confidence 24689999999999999999999999999999999998654
No 238
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.81 E-value=2.3e-19 Score=142.50 Aligned_cols=78 Identities=17% Similarity=0.342 Sum_probs=67.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC---CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~---~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.|.|+|+|..+... ++.+...+....|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 33 G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 112 (215)
T 3mtr_A 33 GNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQAD 112 (215)
T ss_dssp TCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECC
T ss_pred CCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEECC
Confidence 789999999999999999999999999754 33444445667999999999999999999999999998888888764
Q ss_pred c
Q psy12422 78 E 78 (356)
Q Consensus 78 ~ 78 (356)
.
T Consensus 113 ~ 113 (215)
T 3mtr_A 113 T 113 (215)
T ss_dssp C
T ss_pred C
Confidence 3
No 239
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.81 E-value=2.6e-19 Score=142.05 Aligned_cols=75 Identities=19% Similarity=0.365 Sum_probs=49.7
Q ss_pred ecCCCeEEEEEEEcCC-CCC-eEEEEECCEEccCCCceeEEEeCCEEEE--EEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 201 IDDGQCLDLSAVVKGD-PEP-RVSWTKNGQPLNSSNILDLKYKNGVASL--QIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 201 v~~g~~~~l~C~~~g~-p~p-~i~W~~~g~~~~~~~~~~~~~~~~~~~L--~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
+.+|+.++|.|.+.|. |.| .|.|+++|..+........ ...+...+ .+.....+| |.|+|.|.|..+.......
T Consensus 134 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~-~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~~ 211 (215)
T 1c5d_H 134 DTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAV-LQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDKK 211 (215)
T ss_dssp CCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCCBCCCE-EETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred hccCCcEEEEEEEeeeEcCCcEEEEccCCccCceEecCcc-cCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEEe
Confidence 5679999999999876 877 8999998865432111111 12232221 133444456 9999999999998776655
Q ss_pred E
Q psy12422 277 L 277 (356)
Q Consensus 277 l 277 (356)
+
T Consensus 212 ~ 212 (215)
T 1c5d_H 212 L 212 (215)
T ss_dssp C
T ss_pred c
Confidence 4
No 240
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.81 E-value=2.7e-19 Score=139.83 Aligned_cols=141 Identities=13% Similarity=0.173 Sum_probs=98.7
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+.. .+.+|++++|.|.+.+ |.+.+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 3p2t_A 3 LPKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQ-NPLEPKNKARFSIPSMTEDYAGRYRCYYRS 79 (196)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEE-CCCSSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccc-ccccCCceEEEEeccCCcccCceEEEEEeC
Confidence 456778777766 8999999999999998 7789999999987754211 111113457899999999999999999999
Q ss_pred CCCc----eEEEEEEe-cCCCCcc--------c----------------eeEEeC------------------CeEEEEE
Q psy12422 267 SLGT----AETKCKLT-PLNSSNI--------L----------------DLKYKN------------------GVASLQI 299 (356)
Q Consensus 267 ~~g~----~~~~~~l~-p~~~~~~--------~----------------~~~~~~------------------~~~~L~i 299 (356)
..|. ....+.+. +...+.+ . .+.|.+ ....|.|
T Consensus 80 ~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i 159 (196)
T 3p2t_A 80 PVGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRSPMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPM 159 (196)
T ss_dssp TTEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEEEEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEE
T ss_pred CCcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCCCCCEEEEEeCCCcccceeecccccccCcceEEEe
Confidence 9872 22333332 1111110 0 222321 2467999
Q ss_pred ecCCCCCCeEEEEEEEcCCc-----ceEEEEEEEEE
Q psy12422 300 QEVFPEDEGVYVCTATNSLG-----TAETKCKLTVR 330 (356)
Q Consensus 300 ~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~ 330 (356)
.+++.+|+|.|+|.|+|..+ ..+..+.|.|.
T Consensus 160 ~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 160 SPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp CSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred CCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 99999999999999999886 23335666664
No 241
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.81 E-value=7.4e-19 Score=145.22 Aligned_cols=78 Identities=23% Similarity=0.357 Sum_probs=57.9
Q ss_pred CeecccCCceeecCCCeEEEEEEEcC-CC-CCeEEEEEC--CEEcc------------CCCceeEEEeCCEEEEEEccCC
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVKG-DP-EPRVSWTKN--GQPLN------------SSNILDLKYKNGVASLQIQEVF 253 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~g-~p-~p~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~i~~v~ 253 (356)
+.+...+. ..+.+|++++|.|.+.+ .+ .+.+.|++. +..+. ...++..........|.|.+++
T Consensus 141 ~~v~~~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 219 (280)
T 3fku_X 141 PGLTQPPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQ 219 (280)
T ss_dssp CSBBCCSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCC
T ss_pred eEEEeCCc-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCC
Confidence 44444444 78999999999999987 44 478999982 22221 1234555556667789999999
Q ss_pred CCCCeEEEEEEEcCC
Q psy12422 254 PEDEGVYVCTATNSL 268 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~ 268 (356)
.+|+|.|.|.+.|..
T Consensus 220 ~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 220 PEDEADYYCSTWDSS 234 (280)
T ss_dssp GGGCSEEEEEEEETT
T ss_pred HHHCEEEEEEEecCC
Confidence 999999999999976
No 242
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.81 E-value=2.2e-19 Score=145.54 Aligned_cols=76 Identities=18% Similarity=0.315 Sum_probs=53.9
Q ss_pred CceeecCCCeEEEEEEEcC-CCCC-eEEEEECCEEccCCCceeEEE-------eCC----EEEEEEccCCCCC-CeEEEE
Q psy12422 197 TDKTIDDGQCLDLSAVVKG-DPEP-RVSWTKNGQPLNSSNILDLKY-------KNG----VASLQIQEVFPED-EGVYVC 262 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g-~p~p-~i~W~~~g~~~~~~~~~~~~~-------~~~----~~~L~i~~v~~~d-~G~Y~C 262 (356)
....+.+|+.++|.|.+.| .|++ .+.|+++|..+.......... .++ .+.|.|.....+| .|.|+|
T Consensus 132 ~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC 211 (245)
T 4ei6_B 132 SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRC 211 (245)
T ss_dssp CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEE
T ss_pred CcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEE
Confidence 3445667999999999988 4545 799999999887542211100 111 1358899988888 999999
Q ss_pred EEEcCCCceE
Q psy12422 263 TATNSLGTAE 272 (356)
Q Consensus 263 ~a~n~~g~~~ 272 (356)
.|.|......
T Consensus 212 ~v~~~~l~~~ 221 (245)
T 4ei6_B 212 QVQFYGLSEN 221 (245)
T ss_dssp EEEECCBCTT
T ss_pred EEEECCCCCc
Confidence 9999765443
No 243
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.81 E-value=4.1e-19 Score=141.29 Aligned_cols=139 Identities=18% Similarity=0.299 Sum_probs=104.0
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
...+.+...+....+.+|+.+.|.|.+.++|.+.+.|++++..+.... ...|.|.+++.+|+|.|+|.|.|
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~~~n 86 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN---------TSELIFNAVHVKDAGFYVCRVNN 86 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC---------SSEEEETTCCGGGCEEEEEEEEC
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC---------CCEEEEccCChhhCeEeEEEEEc
Confidence 455777788888999999999999999999999999999999886542 23799999999999999999999
Q ss_pred CCCceE---EEEEEecC--C-----------CCccc--------------------------eeEEeC--------CeEE
Q psy12422 267 SLGTAE---TKCKLTPL--N-----------SSNIL--------------------------DLKYKN--------GVAS 296 (356)
Q Consensus 267 ~~g~~~---~~~~l~p~--~-----------~~~~~--------------------------~~~~~~--------~~~~ 296 (356)
..|... ..+.+... . .+.+. .+.|.. ....
T Consensus 87 ~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~~~ 166 (218)
T 3k0w_A 87 NFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKL 166 (218)
T ss_dssp TTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCSSE
T ss_pred CCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCCCE
Confidence 987542 22222200 0 01110 455543 3457
Q ss_pred EEEecCCCCCCeEEEEEEEcCCcc-eEEEEEEEEEecCC
Q psy12422 297 LQIQEVFPEDEGVYVCTATNSLGT-AETKCKLTVRSTPA 334 (356)
Q Consensus 297 L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~ 334 (356)
|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|...+.
T Consensus 167 L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~~ 205 (218)
T 3k0w_A 167 YMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNN 205 (218)
T ss_dssp EEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC---
T ss_pred EEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCcc
Confidence 999999999999999999999888 45588888887544
No 244
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.80 E-value=4.8e-19 Score=144.38 Aligned_cols=132 Identities=20% Similarity=0.280 Sum_probs=90.6
Q ss_pred CeecccCCceeecCCCeEEEEEEEcCCC-----CCeEEEEEC--CEEc------------cCCCceeEEEeCCEEEEEEc
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVKGDP-----EPRVSWTKN--GQPL------------NSSNILDLKYKNGVASLQIQ 250 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~g~p-----~p~i~W~~~--g~~~------------~~~~~~~~~~~~~~~~L~i~ 250 (356)
+.+...+..+.+.+|++++|.|.+.+.| .+.+.|+|+ |..+ ....++.....++...|.|.
T Consensus 39 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 118 (254)
T 2c1o_A 39 LVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKIS 118 (254)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEEC
Confidence 3344445667899999999999999988 388999983 3221 11245555556677799999
Q ss_pred cCCCCCCeEEEEEEEcCCCceEE---EEEEe-cCCCCcc----------------------------ceeEEeC------
Q psy12422 251 EVFPEDEGVYVCTATNSLGTAET---KCKLT-PLNSSNI----------------------------LDLKYKN------ 292 (356)
Q Consensus 251 ~v~~~d~G~Y~C~a~n~~g~~~~---~~~l~-p~~~~~~----------------------------~~~~~~~------ 292 (356)
+++.+|+|.|.|.|.|..+.... .+.+. +..+|.+ ..+.|.+
T Consensus 119 ~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 198 (254)
T 2c1o_A 119 RVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 198 (254)
T ss_dssp SCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEEC
T ss_pred cCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCccc
Confidence 99999999999999998653211 22222 0000100 0244432
Q ss_pred -C-----------------eEEEEEecCCCCCCeEEEEEEEcCCcce
Q psy12422 293 -G-----------------VASLQIQEVFPEDEGVYVCTATNSLGTA 321 (356)
Q Consensus 293 -~-----------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 321 (356)
. .+.|.|.++..+|+|.|+|.|.|.....
T Consensus 199 ~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 199 NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp TTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 1 2579999999999999999999987654
No 245
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.80 E-value=2.5e-18 Score=142.88 Aligned_cols=222 Identities=13% Similarity=0.105 Sum_probs=125.5
Q ss_pred ccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccceeeeeeccccCCC
Q psy12422 89 HNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDS 168 (356)
Q Consensus 89 ~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (356)
...+.+|+.+.|.|.+... +.|++++..+............. ..+........+.+.|.|......+.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~--v~W~~~~~~~~~~~~~~~~~~~~----------~~L~i~~~~~~D~G~Y~C~a~n~~g~ 76 (289)
T 3mjg_X 9 ELVLNVSSTFVLTCSGSAP--VVWERMSQEPPQEMAKAQDGTFS----------SVLTLTNLTGLDTGEYFCTHNDSRGL 76 (289)
T ss_dssp EEECCTTCCEEEEEEESSC--CEEEBTTBCCSEEEEECTTSCEE----------EEEEECSCCGGGCEEEEEECCC----
T ss_pred eEEEeCCCcEEEEEeccce--EEEECCCCCcccceeccCCCcee----------EEEEEccCChhhCEEEEEEEcccCCC
Confidence 3457899999999998865 99999887763211111111100 00111112222333333332221110
Q ss_pred CCcccccceeeecCCCCCCCCCeecccCC--ceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEE
Q psy12422 169 PSRSRSTTKELIMPPDTAMTPPQFANKLT--DKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVAS 246 (356)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~ 246 (356)
.........+.+.. ...|.+...+. ...+.+|+.+.|.|.+. .|.|.+.|++++....... ..+.....
T Consensus 77 -~~~~~~~~~v~v~~---p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~----~~~~~~~~ 147 (289)
T 3mjg_X 77 -ETDERKRLYIFVPD---PTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPV----PYDHQRGF 147 (289)
T ss_dssp ---CCCEEEEEECCC---TTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCC----CEETTTEE
T ss_pred -CcCcEEeEEEEEEC---CCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccce----eecCCcCe
Confidence 01122233344421 01122211111 26789999999999999 7888999998642222111 11111111
Q ss_pred EEEccCCCCCCeEEEEEEEcCCCceEEE-EEEecC--CCCccc--------------------------eeEEeC-----
Q psy12422 247 LQIQEVFPEDEGVYVCTATNSLGTAETK-CKLTPL--NSSNIL--------------------------DLKYKN----- 292 (356)
Q Consensus 247 L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~p~--~~~~~~--------------------------~~~~~~----- 292 (356)
+ ...|+|.|+|.|.|..+..... ..+... .++.+. .+.|..
T Consensus 148 ~-----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~ 222 (289)
T 3mjg_X 148 S-----GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKES 222 (289)
T ss_dssp E-----ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSS
T ss_pred e-----eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccC
Confidence 1 3579999999999877654332 222211 111111 455641
Q ss_pred -----------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 293 -----------------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 293 -----------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
....|.|.+++.+|+|.|+|.|.|..|...+++.|.|.++|...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~~ 283 (289)
T 3mjg_X 223 GRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESGH 283 (289)
T ss_dssp SCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC---
T ss_pred CCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEecCc
Confidence 22689999999999999999999999999999999999998754
No 246
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.80 E-value=9.4e-19 Score=139.51 Aligned_cols=71 Identities=15% Similarity=0.313 Sum_probs=51.2
Q ss_pred cCCCeEEEEEEEcC-CCC-C-eEEEEECCEEccCCCceeEE-EeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceE
Q psy12422 202 DDGQCLDLSAVVKG-DPE-P-RVSWTKNGQPLNSSNILDLK-YKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAE 272 (356)
Q Consensus 202 ~~g~~~~l~C~~~g-~p~-p-~i~W~~~g~~~~~~~~~~~~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 272 (356)
.+|+.++|.|.+.+ +|. + .+.|+++|..+......... ..++ .+.|.|.....+|+|.|+|.|.|..+...
T Consensus 136 ~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 136 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred ccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 67999999999987 776 4 79999998766311100000 0111 23699999999999999999999987644
No 247
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.80 E-value=3.6e-19 Score=122.34 Aligned_cols=93 Identities=24% Similarity=0.543 Sum_probs=82.1
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC--ceeEEEeCCEEEEEEccCCCCCCeEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN--ILDLKYKNGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
..||.|...+.++.+.+|+.+.|.|.+.|.|.|.+.|++||..+.... ++.+...++.++|.|.+++.+|+|.|+|.|
T Consensus 3 ~~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 3knb_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEE
Confidence 356888888888999999999999999999999999999999997654 455666677789999999999999999999
Q ss_pred EcCCCceEEEEEEec
Q psy12422 265 TNSLGTAETKCKLTP 279 (356)
Q Consensus 265 ~n~~g~~~~~~~l~p 279 (356)
.|..|....++.|.+
T Consensus 83 ~N~~G~~~~~~~l~V 97 (100)
T 3knb_A 83 GNEFGSDSATVNIHI 97 (100)
T ss_dssp EETTEEEEEEEEEEE
T ss_pred EECCCEEEEEEEEEE
Confidence 999999988888764
No 248
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.80 E-value=4.5e-19 Score=140.35 Aligned_cols=138 Identities=20% Similarity=0.350 Sum_probs=99.6
Q ss_pred CeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEc------------cCCCceeEEEeCCEEEEEEccCCCCCC
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPL------------NSSNILDLKYKNGVASLQIQEVFPEDE 257 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~------------~~~~~~~~~~~~~~~~L~i~~v~~~d~ 257 (356)
..+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++. ... ..|.|.+++.+|+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~--~~L~i~~v~~~D~ 77 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVT--FSS--SGITFSSVTRKDN 77 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEE--EET--TEEEESCCCGGGC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEE--eec--eeEEEcccCcccC
Confidence 34555667788999999999999999999999999976542 1122222 223 4899999999999
Q ss_pred eEEEEEEEcCCC--ceEEEEEEecCCCCccc---------------------------eeEEeC----------------
Q psy12422 258 GVYVCTATNSLG--TAETKCKLTPLNSSNIL---------------------------DLKYKN---------------- 292 (356)
Q Consensus 258 G~Y~C~a~n~~g--~~~~~~~l~p~~~~~~~---------------------------~~~~~~---------------- 292 (356)
|.|+|.|.|..| .....+.|.+..++.+. .+.|..
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~ 157 (212)
T 1f97_A 78 GEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAF 157 (212)
T ss_dssp EEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSC
T ss_pred eEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccc
Confidence 999999999977 33444444421111110 334432
Q ss_pred ---------CeEEEEEecCCCCCCeEEEEEEEcCCcce--EEEEEEEEEe
Q psy12422 293 ---------GVASLQIQEVFPEDEGVYVCTATNSLGTA--ETKCKLTVRS 331 (356)
Q Consensus 293 ---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~ 331 (356)
..+.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|+.
T Consensus 158 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 158 MNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp SSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred cCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 24579999999999999999999999988 4466666664
No 249
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.80 E-value=1.3e-19 Score=147.24 Aligned_cols=77 Identities=18% Similarity=0.335 Sum_probs=39.7
Q ss_pred eecCCCeEEEEEEEcCC-CCC-eEEEEECCEEccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceEE
Q psy12422 200 TIDDGQCLDLSAVVKGD-PEP-RVSWTKNGQPLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAET 273 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g~-p~p-~i~W~~~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 273 (356)
.+.+|+.++|.|.+.|. |.| .|.|+++|..+...........++ .+.|.|.++..+| |.|+|.|.|.......
T Consensus 144 ~~~~g~~v~L~C~~~g~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~~ 222 (257)
T 3bn9_D 144 KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 222 (257)
T ss_dssp ---------CCCEEEEEBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEEE
T ss_pred cccCCCcEEEEEEEeeEECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcCE
Confidence 35679999999999875 777 899999987642110000111111 2468888888888 9999999998776555
Q ss_pred EEEE
Q psy12422 274 KCKL 277 (356)
Q Consensus 274 ~~~l 277 (356)
...+
T Consensus 223 ~~~i 226 (257)
T 3bn9_D 223 DKKV 226 (257)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5444
No 250
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.80 E-value=1.1e-19 Score=148.55 Aligned_cols=173 Identities=12% Similarity=0.142 Sum_probs=102.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeC--CEEc---c--c-------------CCeeE--EecCCeEEEEEeeCCCCCCeEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKG--NREL---S--K-------------RDYSM--SYSDGVVSMEIIDCKPEDSGEYKC 58 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~--g~~l---~--~-------------~~~~~--~~~~~~~~L~i~~~~~~D~G~Y~C 58 (356)
|++|+|.|.+.+.|.+.+.|||. +... . . .++.. ....+..+|+|.+++.+|+|.|.|
T Consensus 17 G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 96 (259)
T 3omz_A 17 GSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIENDSGVYYC 96 (259)
T ss_dssp TCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGGCEEEEE
T ss_pred CCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcccCEEEEE
Confidence 78999999999999899999992 2111 0 0 01111 122344579999999999999999
Q ss_pred EEEeCCc---eeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEE
Q psy12422 59 VATNKHG---TDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQM 135 (356)
Q Consensus 59 ~a~n~~g---~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~ 135 (356)
.+.|..+ .......|.|......+.... +.
T Consensus 97 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~-------------------------~~---------------------- 129 (259)
T 3omz_A 97 ATWDQNYYKKLFGSGTSLVVTDKQGSADDAK-------------------------KD---------------------- 129 (259)
T ss_dssp EEECTTSSCEEECCCEEEEEEC----------------------------------------------------------
T ss_pred EEeeCCccccEECCCCEEEEecCCCCccccc-------------------------cc----------------------
Confidence 9999765 233445666654311110000 00
Q ss_pred eeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcC
Q psy12422 136 STLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKG 215 (356)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g 215 (356)
. . ....+|.+...+....+.+|++++|.|.+.+
T Consensus 130 ----------------------------------------~--~-----~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 162 (259)
T 3omz_A 130 ----------------------------------------A--A-----KKDGAQKVTQAQSSVSMPVRKAVTLNCLYET 162 (259)
T ss_dssp ------------------------------------------------------CEEECCCCCEEEETTCCEEECCEEEC
T ss_pred ----------------------------------------c--c-----cccCCeeeEEeCCEEEEcCCCCEEEEEECCC
Confidence 0 0 0022344555556678999999999999987
Q ss_pred C-CCCeEEEEECC--EEcc------------CCCceeEE--EeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 216 D-PEPRVSWTKNG--QPLN------------SSNILDLK--YKNGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 216 ~-p~p~i~W~~~g--~~~~------------~~~~~~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
. |.+.+.|+|.+ ..+. ...++... .......|.|.+++.+|+|.|.|.+.+.
T Consensus 163 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 163 SWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp CCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred ccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 5 78899999843 1110 01122221 1123356999999999999999999864
No 251
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.80 E-value=6.8e-19 Score=142.67 Aligned_cols=167 Identities=20% Similarity=0.265 Sum_probs=108.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeC--CEEc-------------c--cCCeeEEe-cCCeEEEEEeeCCCCCCeEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKG--NREL-------------S--KRDYSMSY-SDGVVSMEIIDCKPEDSGEYKCVATN 62 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~--g~~l-------------~--~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~n 62 (356)
|++|+|.|.+.+.|.+.+.|||. +..+ . ..++.... ..+.++|+|.+++.+|+|.|.|.+.|
T Consensus 16 G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 95 (245)
T 3nfj_J 16 GSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYLCAWSV 95 (245)
T ss_dssp TCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEEEEEEee
Confidence 79999999999999999999992 2110 0 12233322 34667999999999999999999998
Q ss_pred CCc------eeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEe
Q psy12422 63 KHG------TDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMS 136 (356)
Q Consensus 63 ~~g------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~ 136 (356)
..| .......|.|......
T Consensus 96 ~~g~~~~~~~~~~~~~l~V~~~~~~------------------------------------------------------- 120 (245)
T 3nfj_J 96 SVGAGVPTIYFGEGSWLTVVEDLNK------------------------------------------------------- 120 (245)
T ss_dssp CTTTSSCCCEECCCEEEEEESCGGG-------------------------------------------------------
T ss_pred ccCCCceeEEECCCeEEEEEcccCC-------------------------------------------------------
Confidence 432 1122334444321000
Q ss_pred eccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeec-ccCCceeecCCCeEEEEEEEcC
Q psy12422 137 TLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFA-NKLTDKTIDDGQCLDLSAVVKG 215 (356)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~~~l~C~~~g 215 (356)
..+|.+. ..+....+.+|+.+.|.|.+.|
T Consensus 121 --------------------------------------------------~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g 150 (245)
T 3nfj_J 121 --------------------------------------------------VFPPEVAVFEPSEAEISHTQKATLVCLATG 150 (245)
T ss_dssp --------------------------------------------------CBCCEEEEEECCHHHHHHHSEEEEEEEEEE
T ss_pred --------------------------------------------------CCCCceEeecCCcccccCCCceEEEEEEcc
Confidence 1223332 2223334566999999999988
Q ss_pred C-CCC-eEEEEECCEEccCCCceeEEE-------eCC----EEEEEEccCCCCC-CeEEEEEEEcCCCceE
Q psy12422 216 D-PEP-RVSWTKNGQPLNSSNILDLKY-------KNG----VASLQIQEVFPED-EGVYVCTATNSLGTAE 272 (356)
Q Consensus 216 ~-p~p-~i~W~~~g~~~~~~~~~~~~~-------~~~----~~~L~i~~v~~~d-~G~Y~C~a~n~~g~~~ 272 (356)
. |++ .+.|+++|..+.......... .++ .+.|.|.....+| .|.|+|.|.|......
T Consensus 151 ~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 151 FFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred CcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 4 544 689999999886532211000 111 1478898888888 6799999999876544
No 252
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.80 E-value=5.2e-18 Score=152.14 Aligned_cols=246 Identities=14% Similarity=0.178 Sum_probs=135.3
Q ss_pred CCceEEEEEeccC-CCC-eeEEeeCCEEccc-CCeeEEecCCe----EEEEEeeCCCCCCeEEEEEEEeCCceeEEEE--
Q psy12422 1 MQNVIKVKVGSTK-PPP-TVKWYKGNRELSK-RDYSMSYSDGV----VSMEIIDCKPEDSGEYKCVATNKHGTDETNC-- 71 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~-~v~W~k~g~~l~~-~~~~~~~~~~~----~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~-- 71 (356)
|+++.|.|.+.|. |.| .|+|++++..... ........++. ..|+|.....+ .|.|+|.|.|..+.....+
T Consensus 150 ~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~ 228 (512)
T 1zvo_C 150 NSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFR 228 (512)
T ss_pred CCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEec
Confidence 3679999999876 765 8999997653211 11111222332 35888877766 9999999999987765544
Q ss_pred ---------EEEEecccc------------------------------------------------chhhhhh---cccc
Q psy12422 72 ---------VVIVESEEE------------------------------------------------SKEQQEL---AHNF 91 (356)
Q Consensus 72 ---------~l~v~~~~~------------------------------------------------~~~~~~~---~~~~ 91 (356)
.+.+..++. .++...+ ....
T Consensus 229 ~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~ 308 (512)
T 1zvo_C 229 WPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQD 308 (512)
T ss_pred CCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHH
Confidence 233332111 0000001 1122
Q ss_pred cccCccceeeeccc---C-CceeeecccccccCCcccc-----CCCCceE-----EE---EeeccccccccccccCCCcc
Q psy12422 92 LYSGDRKYIEKHIR---P-APAIITTRQEIKSSYSSHT-----DDTGRTT-----TQ---MSTLSSNYSSSTNNATSPSK 154 (356)
Q Consensus 92 ~~~g~~~~l~c~~~---p-~p~i~w~~~~~~~~~~~~~-----~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~ 154 (356)
+.+|+.+.|.|.+. | ...|.|++++......... ..++... .. ...+.+.|.|.+.+.....
T Consensus 309 ~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~- 387 (512)
T 1zvo_C 309 LWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPP- 387 (512)
T ss_pred hccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCC-
Confidence 56799999999986 3 2379999988764311000 0111000 00 0111234444433221111
Q ss_pred ceeeeeeccccCCCCCcccccceeeecCCCC-CCCCCeecccCCceeecCCCeEE-EEEEEcCCCCC--eEEEEECCEEc
Q psy12422 155 KITRRMNSILDTDSPSRSRSTTKELIMPPDT-AMTPPQFANKLTDKTIDDGQCLD-LSAVVKGDPEP--RVSWTKNGQPL 230 (356)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~v~~g~~~~-l~C~~~g~p~p--~i~W~~~g~~~ 230 (356)
. ...+...... ...+|.+...+... +|+.+. |.|.+.|++++ .+.|+|||..+
T Consensus 388 ---------------~-----~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~ 444 (512)
T 1zvo_C 388 ---------------Q-----RLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREV 444 (512)
T ss_pred ---------------C-----ceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeEC
Confidence 0 1111110000 02345544333221 789999 99999986544 58999999998
Q ss_pred cCCCcee--EE-EeCC-----EEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 231 NSSNILD--LK-YKNG-----VASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 231 ~~~~~~~--~~-~~~~-----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
....... .. ..++ .+.|.|.....+|.|.|+|.|.|.....
T Consensus 445 ~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~ 493 (512)
T 1zvo_C 445 NTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRT 493 (512)
T ss_pred cCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCC
Confidence 7543211 11 1122 1467777777788999999999987653
No 253
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.80 E-value=1e-19 Score=155.36 Aligned_cols=145 Identities=17% Similarity=0.250 Sum_probs=114.1
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCe-EEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEG-VYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a~ 265 (356)
..+|.+...+....+.+|+++.|.|.+.|.|.|.+.|++++..+...... ........|.|.+++.+|+| .|+|.|.
T Consensus 156 c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~~Y~C~a~ 233 (347)
T 2ifg_A 156 CGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK--SGGLPSLGLTLANVTSDLNRKNVTCWAE 233 (347)
T ss_dssp CCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC--CCCSSEEEEEEESCCSTTTTCCEEECCE
T ss_pred CCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc--ceecccceEEEeeCChHHCCCeEEEEEE
Confidence 56788888888889999999999999999999999999988664422111 12334578999999999999 9999999
Q ss_pred cCCCceEEEEEEecCCCCcc-c---------------------eeEEeC------------------------CeEEEEE
Q psy12422 266 NSLGTAETKCKLTPLNSSNI-L---------------------DLKYKN------------------------GVASLQI 299 (356)
Q Consensus 266 n~~g~~~~~~~l~p~~~~~~-~---------------------~~~~~~------------------------~~~~L~i 299 (356)
|..|.....+.+.+..+|.+ . .+.|.. ..+.|.|
T Consensus 234 n~~g~~~~~~~l~V~~~P~i~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I 313 (347)
T 2ifg_A 234 NDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRL 313 (347)
T ss_dssp ETTEECCEEECCCCBEEEEEEECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEE
T ss_pred cCCCCEEEEEEEEEcCCCeeeeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEE
Confidence 99987776665553322221 0 334432 1456999
Q ss_pred ecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecC
Q psy12422 300 QEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTP 333 (356)
Q Consensus 300 ~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 333 (356)
.+++.+|+|.|+|.|.|..|..++.+.|.|.++|
T Consensus 314 ~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 314 NQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred CCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 9999999999999999999999999999998876
No 254
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.80 E-value=8.1e-19 Score=144.23 Aligned_cols=165 Identities=16% Similarity=0.205 Sum_probs=107.8
Q ss_pred CCceEEEEEeccCCCCeeEEee--CCEEc------------cc-----CCeeEEe-cCCeEEEEEeeCCCCCCeEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYK--GNREL------------SK-----RDYSMSY-SDGVVSMEIIDCKPEDSGEYKCVA 60 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k--~g~~l------------~~-----~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a 60 (356)
|++|+|.|.+. .|.+.+.||| .+..+ .. .++.... ..+..+|+|.+++.+|+|.|.|.+
T Consensus 41 G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 119 (268)
T 3pl6_D 41 GKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVYLCAT 119 (268)
T ss_dssp TCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCEEEEEEE
Confidence 79999999986 5788999999 22211 11 2333332 244679999999999999999999
Q ss_pred EeC--CceeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeec
Q psy12422 61 TNK--HGTDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTL 138 (356)
Q Consensus 61 ~n~--~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (356)
.|. .........|.|......
T Consensus 120 ~~~~~~~~~~~~~~l~V~~~~~~--------------------------------------------------------- 142 (268)
T 3pl6_D 120 SALGDTQYFGPGTRLTVLEDLKN--------------------------------------------------------- 142 (268)
T ss_dssp ESSSSSCEECCCEEEEEESCGGG---------------------------------------------------------
T ss_pred ecCCCceeeCCcEEEEEecCccc---------------------------------------------------------
Confidence 974 333333445555431000
Q ss_pred cccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeec-ccCCceeecCCCeEEEEEEEcCCC
Q psy12422 139 SSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFA-NKLTDKTIDDGQCLDLSAVVKGDP 217 (356)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~~~l~C~~~g~p 217 (356)
..+|.+. ..+....+.+|+.++|.|.+.|.|
T Consensus 143 ------------------------------------------------~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~ 174 (268)
T 3pl6_D 143 ------------------------------------------------VFPPEVAVFEPSEAEISHTQKATLVCLATGFY 174 (268)
T ss_dssp ------------------------------------------------CBCCEEEEECCCHHHHHHHSEEEEEEEEEEEB
T ss_pred ------------------------------------------------ccCCceEEeCCCcccccCCCceEEEEEECccc
Confidence 1123222 223344566799999999998865
Q ss_pred CC--eEEEEECCEEccCCCceeE---E----EeCC----EEEEEEccCCCCC-CeEEEEEEEcCCCce
Q psy12422 218 EP--RVSWTKNGQPLNSSNILDL---K----YKNG----VASLQIQEVFPED-EGVYVCTATNSLGTA 271 (356)
Q Consensus 218 ~p--~i~W~~~g~~~~~~~~~~~---~----~~~~----~~~L~i~~v~~~d-~G~Y~C~a~n~~g~~ 271 (356)
++ .+.|+++|..+........ . ..++ .+.|.|.....+| +|.|+|.|.|.....
T Consensus 175 p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~ 242 (268)
T 3pl6_D 175 PDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 242 (268)
T ss_dssp SSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred CCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCC
Confidence 54 7999999988864321110 0 0011 1467888888887 999999999987654
No 255
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.79 E-value=3e-18 Score=134.32 Aligned_cols=132 Identities=21% Similarity=0.303 Sum_probs=95.8
Q ss_pred eeecCCCeEEEEEEEcCCCCCeEEEEECC-EEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEE
Q psy12422 199 KTIDDGQCLDLSAVVKGDPEPRVSWTKNG-QPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKL 277 (356)
Q Consensus 199 ~~v~~g~~~~l~C~~~g~p~p~i~W~~~g-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 277 (356)
..+.+|+++.|.|.+.|.|.|.+.|+++. ..+. .. ....+....|.|.+++.+|+|.|.|.|.|..|.....+.|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GK--VTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SE--EEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ce--EEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 34569999999999999999999999843 2221 11 2234455689999999999999999999998877666666
Q ss_pred ecCCCCcc-----------------------------ceeEEeCC---------------------eEEEEEecCCCCCC
Q psy12422 278 TPLNSSNI-----------------------------LDLKYKNG---------------------VASLQIQEVFPEDE 307 (356)
Q Consensus 278 ~p~~~~~~-----------------------------~~~~~~~~---------------------~~~L~i~~v~~~d~ 307 (356)
.+...+.. ..+.|.++ ...|.|..+..+|+
T Consensus 87 ~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~ 166 (202)
T 1vca_A 87 EIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIG 166 (202)
T ss_dssp EEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTT
T ss_pred EEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCC
Confidence 52211110 02345321 23456777788899
Q ss_pred eEEEEEEEcCCcc-------eEEEEEEEEEecCC
Q psy12422 308 GVYVCTATNSLGT-------AETKCKLTVRSTPA 334 (356)
Q Consensus 308 G~Y~C~a~n~~g~-------~~~~~~l~V~~~p~ 334 (356)
|.|+|+|.|..|. .++.+.|.|.++|.
T Consensus 167 g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 167 KVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred CeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 9999999998876 45689999999986
No 256
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.79 E-value=6e-19 Score=122.73 Aligned_cols=78 Identities=26% Similarity=0.367 Sum_probs=69.6
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.|.|+|||||+.|..+ ++.+...++..+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++
T Consensus 28 G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~p 106 (107)
T 3knb_B 28 GAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp TSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred CCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEEEcC
Confidence 789999999999999999999999999765 455556667779999999999999999999999999999999999865
No 257
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.79 E-value=1.8e-19 Score=145.04 Aligned_cols=67 Identities=13% Similarity=0.160 Sum_probs=50.3
Q ss_pred CCceEEEEEeccC---CCC-eeEEeeCCEEcccCC--eeEEecCC----eEEEEEeeCCCCCCeEEEEEEEeCCcee
Q psy12422 1 MQNVIKVKVGSTK---PPP-TVKWYKGNRELSKRD--YSMSYSDG----VVSMEIIDCKPEDSGEYKCVATNKHGTD 67 (356)
Q Consensus 1 g~~v~l~C~~~g~---p~~-~v~W~k~g~~l~~~~--~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 67 (356)
|++++|.|.+.|. |.+ .|+|||++..+.... ......++ ...|+|.+++.+|+|.|+|.+.|..+..
T Consensus 32 G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 32 GLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp SSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred CCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 7899999999876 776 899999987664321 11122222 3479999999999999999999987653
No 258
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.79 E-value=2e-18 Score=140.44 Aligned_cols=80 Identities=16% Similarity=0.295 Sum_probs=54.9
Q ss_pred eecCCCeEEEEEEEcC-CCCC-eEEEEECCEEccCCCceeEEEeC---CEEEEEEccCCCCCCeEEEEEEEcCCCceEEE
Q psy12422 200 TIDDGQCLDLSAVVKG-DPEP-RVSWTKNGQPLNSSNILDLKYKN---GVASLQIQEVFPEDEGVYVCTATNSLGTAETK 274 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g-~p~p-~i~W~~~g~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 274 (356)
.+.+|+.++|.|.+.| +|.+ .+.|+++|..+...........+ ..+.|.|.....+| |.|+|.|.|..+.....
T Consensus 135 ~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~ 213 (253)
T 3liz_H 135 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 213 (253)
T ss_dssp ----CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEE
T ss_pred ccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceE
Confidence 4567999999999987 7766 79999988643211000001111 12579999999999 99999999999988877
Q ss_pred EEEecC
Q psy12422 275 CKLTPL 280 (356)
Q Consensus 275 ~~l~p~ 280 (356)
..+.+.
T Consensus 214 ~~~~~~ 219 (253)
T 3liz_H 214 KKIVPR 219 (253)
T ss_dssp EECCCC
T ss_pred EEecCc
Confidence 777643
No 259
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.78 E-value=5.3e-19 Score=139.40 Aligned_cols=68 Identities=24% Similarity=0.380 Sum_probs=46.1
Q ss_pred CCCeEEEEEEEcCC-CC-CeEEEEECCEEccCCCceeEE-EeCC----EEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 203 DGQCLDLSAVVKGD-PE-PRVSWTKNGQPLNSSNILDLK-YKNG----VASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 203 ~g~~~~l~C~~~g~-p~-p~i~W~~~g~~~~~~~~~~~~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
.|..+.|.|.+.|. |+ +.|.|++||..+......... ..++ .+.|.|.....+|.|.|+|.|.|....
T Consensus 123 ~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 123 TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp GSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred cCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 45669999999885 54 389999999887632211111 1122 134566666667899999999998764
No 260
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.78 E-value=3.9e-19 Score=142.56 Aligned_cols=66 Identities=6% Similarity=0.077 Sum_probs=49.8
Q ss_pred CCceEEEEEeccC-CC-C-eeEEeeCCEEc-ccCCeeE-EecCCe----EEEEEeeCCCCCCeEEEEEEEeCCce
Q psy12422 1 MQNVIKVKVGSTK-PP-P-TVKWYKGNREL-SKRDYSM-SYSDGV----VSMEIIDCKPEDSGEYKCVATNKHGT 66 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~-~-~v~W~k~g~~l-~~~~~~~-~~~~~~----~~L~i~~~~~~D~G~Y~C~a~n~~g~ 66 (356)
|++++|.|.+.|. |. | .|+|+|+|+.+ ....... ...++. ..|+|.+++.+|+|.|+|.+.|..+.
T Consensus 28 G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 102 (231)
T 2w59_A 28 SLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELP 102 (231)
T ss_dssp SCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred CCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCC
Confidence 7899999999874 74 4 99999999887 3322111 223333 36999999999999999999997654
No 261
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.78 E-value=6.8e-19 Score=138.07 Aligned_cols=140 Identities=21% Similarity=0.305 Sum_probs=101.5
Q ss_pred ecccCCceeecCCCeEEEEEE-EcCCCC-CeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 192 FANKLTDKTIDDGQCLDLSAV-VKGDPE-PRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 192 ~~~~~~~~~v~~g~~~~l~C~-~~g~p~-p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
....+..+.+.+|+.+.|.|. +.++|. +.+.|++++..+................|.|.+++.+|+|.|+|.+.|..+
T Consensus 11 ~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 90 (201)
T 3s97_C 11 PPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSI 90 (201)
T ss_dssp CSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGG
T ss_pred CcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCC
Confidence 334457788999999999999 889998 999999998777532221222223334799999999999999999999776
Q ss_pred ceEEE---EEEe--cC-----CCC-------cc-------------------ceeEEeC-------------CeEEEEEe
Q psy12422 270 TAETK---CKLT--PL-----NSS-------NI-------------------LDLKYKN-------------GVASLQIQ 300 (356)
Q Consensus 270 ~~~~~---~~l~--p~-----~~~-------~~-------------------~~~~~~~-------------~~~~L~i~ 300 (356)
..... ..+. +. .++ .. ..+.|.. ....|.|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~ 170 (201)
T 3s97_C 91 TKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIF 170 (201)
T ss_dssp TEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEEC
T ss_pred CcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEc
Confidence 55431 1110 00 000 00 0344432 34689999
Q ss_pred cCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 301 EVFPEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 301 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
+++.+|+|.|+|.|.|..|..+..+.|.|++
T Consensus 171 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~a 201 (201)
T 3s97_C 171 NIQLEDEGIYECEAENIRGKDKHQARIYVQA 201 (201)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCChhhCEEEEEEEEecCCceeeeEEEEEeC
Confidence 9999999999999999999999999999874
No 262
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.78 E-value=1.9e-18 Score=138.19 Aligned_cols=135 Identities=16% Similarity=0.159 Sum_probs=91.8
Q ss_pred CceeecCCCeEEEEEEEcCCCCC---eEEEEECCEEc-----------cCC------CceeEE---EeCCEEEEEEccCC
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDPEP---RVSWTKNGQPL-----------NSS------NILDLK---YKNGVASLQIQEVF 253 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p~p---~i~W~~~g~~~-----------~~~------~~~~~~---~~~~~~~L~i~~v~ 253 (356)
..+.+.+|++++|.|.+.+.|.+ .|.|+|++... ... .+.... ...+..+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 45778999999999999877654 59999865321 110 111111 12345789999999
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEEecCCCCcc-------------------------ceeEEeCC---------------
Q psy12422 254 PEDEGVYVCTATNSLGTAETKCKLTPLNSSNI-------------------------LDLKYKNG--------------- 293 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~-------------------------~~~~~~~~--------------- 293 (356)
.+|+|.|+|.|.|..|.....+.+.+...... ..+.|.++
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~ 171 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVAD 171 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEEC
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEEC
Confidence 99999999999999998877766652211110 04555431
Q ss_pred ----eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 294 ----VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 294 ----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
...+.+..++.+|+|.|+|.|+|.+|..++.+.|.|..
T Consensus 172 ~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 172 GVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp TTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred CCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 12345567889999999999999999999999998865
No 263
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.78 E-value=1.6e-18 Score=137.24 Aligned_cols=137 Identities=16% Similarity=0.222 Sum_probs=92.7
Q ss_pred CCceeecCC--CeEEEEEEEcCCCCCeEEEEE---CCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 196 LTDKTIDDG--QCLDLSAVVKGDPEPRVSWTK---NGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 196 ~~~~~v~~g--~~~~l~C~~~g~p~p~i~W~~---~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
+..+.+.+| +++.|.|.+.+ |.+.+.|++ +|..+........ .... .|.|.+++.+|+|.|+|.|.|..+.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~-~~~~--~l~I~~v~~~D~G~Y~C~a~n~~~~ 89 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISW-DSKK--GFTIPSYMISYAGMVFCEAKINDES 89 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEE-ETTT--EEEEEGGGTTTCSEEEEEEC----C
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccc-cCCc--cEEEccCChhcCceEEEEEEECCee
Confidence 467889999 99999999986 789999988 4766665433322 2222 6999999999999999999985443
Q ss_pred eEEE-EEEecC---------CCCcc----------------------ceeEEeC-------------------------C
Q psy12422 271 AETK-CKLTPL---------NSSNI----------------------LDLKYKN-------------------------G 293 (356)
Q Consensus 271 ~~~~-~~l~p~---------~~~~~----------------------~~~~~~~-------------------------~ 293 (356)
.... +.+... .++.. ..+.|.. .
T Consensus 90 ~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 169 (213)
T 2x1w_L 90 YQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKF 169 (213)
T ss_dssp EECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEE
T ss_pred EEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceee
Confidence 2221 222110 00000 0233332 1
Q ss_pred eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 294 VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 294 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
.+.|.|.+++.+|+|.|+|.|.|..|..++.+.|.|..+|.|.
T Consensus 170 ~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~ 212 (213)
T 2x1w_L 170 LSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIEG 212 (213)
T ss_dssp EEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC-----
T ss_pred eEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccccC
Confidence 2349999999999999999999999999999999999998764
No 264
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.78 E-value=2.2e-18 Score=141.77 Aligned_cols=76 Identities=20% Similarity=0.316 Sum_probs=54.0
Q ss_pred CceeecCCCeEEEEEEEcC-CCCC-eEEEEECCEEccCCCceeE---E-----EeCC---EEEEEEccCCCCC-CeEEEE
Q psy12422 197 TDKTIDDGQCLDLSAVVKG-DPEP-RVSWTKNGQPLNSSNILDL---K-----YKNG---VASLQIQEVFPED-EGVYVC 262 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g-~p~p-~i~W~~~g~~~~~~~~~~~---~-----~~~~---~~~L~i~~v~~~d-~G~Y~C 262 (356)
....+.+|+.++|.|.+.| +|.| .+.|+++|..+........ . .++. .+.|.|.....+| .|.|+|
T Consensus 157 ~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC 236 (270)
T 3qib_D 157 SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRC 236 (270)
T ss_dssp CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEE
T ss_pred CccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEE
Confidence 3345566999999999988 6766 7999999998865322110 0 0111 1467888888888 999999
Q ss_pred EEEcCCCceE
Q psy12422 263 TATNSLGTAE 272 (356)
Q Consensus 263 ~a~n~~g~~~ 272 (356)
.|.|......
T Consensus 237 ~v~~~~l~~~ 246 (270)
T 3qib_D 237 QVQFYGLSEN 246 (270)
T ss_dssp EEEECCBCTT
T ss_pred EEEecCCCCc
Confidence 9999876543
No 265
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.78 E-value=2.3e-18 Score=131.36 Aligned_cols=133 Identities=12% Similarity=0.191 Sum_probs=100.1
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCC-CCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDP-EPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p-~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
.+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|+++|..+..... .+.|.+++.+|+|.|+|.|.|
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETT
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeC
Confidence 346677777777899999999999999887 578999999998875421 466789999999999999998
Q ss_pred CCCceEEEEEEecC----CCCcc--------------------ceeEEeC---------CeEEEEEecCCCCCCeEEEEE
Q psy12422 267 SLGTAETKCKLTPL----NSSNI--------------------LDLKYKN---------GVASLQIQEVFPEDEGVYVCT 313 (356)
Q Consensus 267 ~~g~~~~~~~l~p~----~~~~~--------------------~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~ 313 (356)
........+.+... ..+.. ..+.|.. ....|.|.+++.+|+|.|+|.
T Consensus 73 ~~~s~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 152 (170)
T 3ry4_A 73 TSLSDPVHLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYHCT 152 (170)
T ss_dssp SBCCCCEEEEEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGGGCEEEEEE
T ss_pred CCceEeEEEEEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEeccccCCEEEEEE
Confidence 77766555555410 00000 1344433 456899999999999999999
Q ss_pred EEcCCcc-eEEEEEEEEE
Q psy12422 314 ATNSLGT-AETKCKLTVR 330 (356)
Q Consensus 314 a~n~~g~-~~~~~~l~V~ 330 (356)
|.|..|. .+..+.|.|+
T Consensus 153 a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 153 GNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp EEETTEEEECCCEEEEEC
T ss_pred EEeCcCccccccEEEEEC
Confidence 9999997 4446777664
No 266
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.77 E-value=4.7e-18 Score=137.38 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=50.2
Q ss_pred eeecCCCeEEEEEEEcCC-CC-CeEEEEECCE-EccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 199 KTIDDGQCLDLSAVVKGD-PE-PRVSWTKNGQ-PLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 199 ~~v~~g~~~~l~C~~~g~-p~-p~i~W~~~g~-~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
..+.+|+.++|.|.+.|. |. +.+.|+++|. .+...........++ .+.|.|..+.. | |.|+|.|.|..+..
T Consensus 142 ~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~ 219 (242)
T 1hxm_B 142 AETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKN 219 (242)
T ss_dssp GGGGSSSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGG
T ss_pred hhcccCCCceEEEEEeeEECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCC
Confidence 346679999999999876 64 6899999986 553221000111111 24788887775 4 99999999999875
Q ss_pred EE
Q psy12422 272 ET 273 (356)
Q Consensus 272 ~~ 273 (356)
..
T Consensus 220 ~~ 221 (242)
T 1hxm_B 220 GV 221 (242)
T ss_dssp GS
T ss_pred Cc
Confidence 33
No 267
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.77 E-value=3.2e-18 Score=117.57 Aligned_cols=77 Identities=21% Similarity=0.431 Sum_probs=69.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC---CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~---~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.|+|+|||+++... ++.+...++..+|.|.+++.+|+|.|+|.|.|..|.++..+.|.|..
T Consensus 20 G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 20 GKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp TSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEEEEE
Confidence 789999999999999999999999999653 45566677778999999999999999999999999999999998863
No 268
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.77 E-value=1.1e-17 Score=156.65 Aligned_cols=146 Identities=18% Similarity=0.270 Sum_probs=98.8
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCCCeEE-EE--ECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEE
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVS-WT--KNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~-W~--~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
.+|.+. .+.+..+.+|+++.|.|.+.|.|.|.+. |+ ++|..+.......+......+.|.|.++...|+|.|+|.|
T Consensus 164 ~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A 242 (731)
T 2v5y_A 164 RTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMI 242 (731)
T ss_dssp SSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEE
T ss_pred cccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEE
Confidence 345554 3456789999999999999999999987 88 6777664322111111112368999999999999999999
Q ss_pred EcCCCc-eEEEEEEe----cCC--CCccc-------------------------eeEEe-----------CCeEEEEEec
Q psy12422 265 TNSLGT-AETKCKLT----PLN--SSNIL-------------------------DLKYK-----------NGVASLQIQE 301 (356)
Q Consensus 265 ~n~~g~-~~~~~~l~----p~~--~~~~~-------------------------~~~~~-----------~~~~~L~i~~ 301 (356)
.|..|. ....+.+. |.. .+.+. .+.+. .....+.|.+
T Consensus 243 ~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~i~~ 322 (731)
T 2v5y_A 243 RTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGH 322 (731)
T ss_dssp EETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSCEEEEECCSSEEEECS
T ss_pred ECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCceEEeccCcceEEEeC
Confidence 999997 44434443 111 11110 11111 1235789999
Q ss_pred CCCCCCeEEEEEEE--cCCcceEEEEEEEEEecCC
Q psy12422 302 VFPEDEGVYVCTAT--NSLGTAETKCKLTVRSTPA 334 (356)
Q Consensus 302 v~~~d~G~Y~C~a~--n~~g~~~~~~~l~V~~~p~ 334 (356)
+...+...|+|.|. |..|....+..+.+...+.
T Consensus 323 L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~ 357 (731)
T 2v5y_A 323 LDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA 357 (731)
T ss_dssp CCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC
T ss_pred CCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC
Confidence 99999999999999 9999876554455555443
No 269
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.77 E-value=4.1e-18 Score=140.80 Aligned_cols=167 Identities=20% Similarity=0.302 Sum_probs=108.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--EEc--------------c----cCCeeEEe-cCCeEEEEEeeCCCCCCeEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--REL--------------S----KRDYSMSY-SDGVVSMEIIDCKPEDSGEYKCV 59 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~~l--------------~----~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~ 59 (356)
|++|+|.|.+.+.|.+.+.|||++ ... . ..++.... ..+..+|+|.+++.+|+|.|.|.
T Consensus 39 G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 118 (279)
T 2wbj_D 39 GTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICS 118 (279)
T ss_dssp TSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCCEEEEEE
Confidence 789999999988888999999953 111 0 12333322 24567999999999999999999
Q ss_pred EEeCCc------eeEEEEEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEE
Q psy12422 60 ATNKHG------TDETNCVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTT 133 (356)
Q Consensus 60 a~n~~g------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~ 133 (356)
+.|..+ .....+.|.|.....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~l~V~~~~~----------------------------------------------------- 145 (279)
T 2wbj_D 119 ARDLTSGANNEQFFGPGTRLTVTEDLK----------------------------------------------------- 145 (279)
T ss_dssp EEETTCBTSCCEEECCCEEEEEESCGG-----------------------------------------------------
T ss_pred EcccccCCccceeeCCCEEEEEecCCC-----------------------------------------------------
Confidence 998432 111223455442100
Q ss_pred EEeeccccccccccccCCCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecc-cCCceeecCCCeEEEEEE
Q psy12422 134 QMSTLSSNYSSSTNNATSPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFAN-KLTDKTIDDGQCLDLSAV 212 (356)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~~~l~C~ 212 (356)
...+|.+.. .+....+.+|+.++|.|.
T Consensus 146 ----------------------------------------------------~~~~P~v~~~~~~~~~~~~g~~v~L~C~ 173 (279)
T 2wbj_D 146 ----------------------------------------------------NVFPPEVAVFEPSEAEISHTQKATLVCL 173 (279)
T ss_dssp ----------------------------------------------------GCBCCEEEEEECCHHHHHHHSCCEEEEE
T ss_pred ----------------------------------------------------CCCCCEEEEECCCcccccCCCceEEEEE
Confidence 012333322 223334567999999999
Q ss_pred EcCC-CC-CeEEEEECCEEccCCCcee---EE----EeCC----EEEEEEccCCCCC-CeEEEEEEEcCCCceE
Q psy12422 213 VKGD-PE-PRVSWTKNGQPLNSSNILD---LK----YKNG----VASLQIQEVFPED-EGVYVCTATNSLGTAE 272 (356)
Q Consensus 213 ~~g~-p~-p~i~W~~~g~~~~~~~~~~---~~----~~~~----~~~L~i~~v~~~d-~G~Y~C~a~n~~g~~~ 272 (356)
+.|. |+ +.|.|++||..+....... .. ..++ .+.|.|......| .|.|+|+|.|......
T Consensus 174 ~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 174 ATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp EEEEBSSCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCTT
T ss_pred EeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCCC
Confidence 9886 43 6899999999886542211 00 0111 2358888887765 7789999999876544
No 270
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.76 E-value=3.1e-18 Score=133.84 Aligned_cols=130 Identities=14% Similarity=0.157 Sum_probs=91.7
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.|...+.. .+.+|++++|.|.+.+.|. .+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 2d3v_A 3 LSKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYS 79 (196)
T ss_dssp CCBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeC
Confidence 456777777664 7999999999999998766 9999999987653211 011234457899999999999999999999
Q ss_pred CCCceE----EEEEEec-CCCCccc------------------------eeEEeC-------------------CeEEEE
Q psy12422 267 SLGTAE----TKCKLTP-LNSSNIL------------------------DLKYKN-------------------GVASLQ 298 (356)
Q Consensus 267 ~~g~~~----~~~~l~p-~~~~~~~------------------------~~~~~~-------------------~~~~L~ 298 (356)
..|... ..+.+.. ...+.+. .+.|.+ ....|.
T Consensus 80 ~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~ 159 (196)
T 2d3v_A 80 PAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRFDRFILTEEGDHKLSWTLDSQLTPSGQFQALFP 159 (196)
T ss_dssp TTEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEESSCCSEEEEEEC---CCEEEEECEECTTSCEEEEEE
T ss_pred CCCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCCCCCEEEEEccCCcccccccccccccCCCceeEEE
Confidence 876322 2333321 0011110 333322 126899
Q ss_pred EecCCCCCCeEEEEEEEcCCc
Q psy12422 299 IQEVFPEDEGVYVCTATNSLG 319 (356)
Q Consensus 299 i~~v~~~d~G~Y~C~a~n~~g 319 (356)
|.+++.+|+|.|+|.|+|..+
T Consensus 160 I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 160 VGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp CCCCBTTBCEEEEEEEEETTE
T ss_pred eeecCcccCeeEEEEEEccCC
Confidence 999999999999999999875
No 271
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.76 E-value=1.2e-18 Score=136.50 Aligned_cols=141 Identities=14% Similarity=0.128 Sum_probs=96.0
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+. ..+.+|++++|.|.+.+.|. .+.|+|+|..+....... ........|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 3 LPKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP-QELVKKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC-HHHHTTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc-ccCCcccEEEECCCCHHHCeEEEEEEEC
Confidence 46678877665 47999999999999998876 699999998764211100 0011224899999999999999999999
Q ss_pred CC-C--c--eEEEEEEec-CCCCccc------------------------eeEEeC-------------------CeEEE
Q psy12422 267 SL-G--T--AETKCKLTP-LNSSNIL------------------------DLKYKN-------------------GVASL 297 (356)
Q Consensus 267 ~~-g--~--~~~~~~l~p-~~~~~~~------------------------~~~~~~-------------------~~~~L 297 (356)
.. | . ....+.+.. ...+.+. .+.|.+ ....|
T Consensus 80 ~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L 159 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAFDGFILCKEGEDEHPQCLNSQPHARGSSRAIF 159 (198)
T ss_dssp TTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSCCSEEEEEEC------CEEEC------CCEEEE
T ss_pred CCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCCCCcEEEEEECCCccCCccccccccCCCcceeEE
Confidence 87 4 2 222333321 0011110 333322 13789
Q ss_pred EEecCCCCCCeEEEEEEEcCCcc-----eEEEEEEEEE
Q psy12422 298 QIQEVFPEDEGVYVCTATNSLGT-----AETKCKLTVR 330 (356)
Q Consensus 298 ~i~~v~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~ 330 (356)
.|.+++.+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 160 ~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 160 SVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred EecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 99999999999999999998763 2446677765
No 272
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.76 E-value=7.2e-18 Score=130.26 Aligned_cols=121 Identities=16% Similarity=0.095 Sum_probs=88.5
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+.. .+.+|++++|.|.+.+ |.+.+.|+|+|... ... ...|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~~~--~~~L~i~~v~~~D~G~Y~C~a~n 73 (184)
T 2gi7_A 6 LPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------YQD--QAVLFIPAMKRSLAGRYRCSYQN 73 (184)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC--------EES--SSEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc--------cCc--ccEEEECcCChhhCceEEEEEEc
Confidence 567888777764 7999999999999988 88899999988651 112 23899999999999999999999
Q ss_pred CCCc----eEEEEEEec-CCCCccc------------------------eeEEeC-------------CeEEEEEecCCC
Q psy12422 267 SLGT----AETKCKLTP-LNSSNIL------------------------DLKYKN-------------GVASLQIQEVFP 304 (356)
Q Consensus 267 ~~g~----~~~~~~l~p-~~~~~~~------------------------~~~~~~-------------~~~~L~i~~v~~ 304 (356)
..|. ....+.+.. ...+.+. .+.|.+ ....|.|.+++.
T Consensus 74 ~~g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~ 153 (184)
T 2gi7_A 74 GSLWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGFDQFALYKEGDPAPYKNPERWYRASFPIITVTA 153 (184)
T ss_dssp TTEEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSSCCCEEEEEECCCCTTSCCCCEEEEESSSEEEETT
T ss_pred CCCccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCCCCcEEEEEECCCcCcceecCCCceEEEEEccCCc
Confidence 7652 223333320 1111110 344432 246799999999
Q ss_pred CCCeEEEEEEEcCCc
Q psy12422 305 EDEGVYVCTATNSLG 319 (356)
Q Consensus 305 ~d~G~Y~C~a~n~~g 319 (356)
+|+|.|+|.|.|..+
T Consensus 154 ~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 154 AHSGTYRCYSFSSRD 168 (184)
T ss_dssp CCSEEEEEEEECTTS
T ss_pred cCCeEEEEEEEeCCC
Confidence 999999999999865
No 273
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=2.9e-17 Score=126.93 Aligned_cols=125 Identities=22% Similarity=0.356 Sum_probs=91.0
Q ss_pred eeecCCCeEEEEEEEcCCCCC--eEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 199 KTIDDGQCLDLSAVVKGDPEP--RVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 199 ~~v~~g~~~~l~C~~~g~p~p--~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
..+.+|+++.|.|.+.+.|.| .+.|+++|..+...... .....|.|. +.+|+|.|+|.|.|... ....+.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~~~-~~~~l~ 79 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPEPM-GTANIQ 79 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEESTTS-CEEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEECCcC-cEEEEE
Confidence 468899999999999988877 89999999888755422 223467776 68899999999998433 333333
Q ss_pred Ee--cC-----------------------CCCccceeEEeC-----------------------CeEEEEEecCC-CCCC
Q psy12422 277 LT--PL-----------------------NSSNILDLKYKN-----------------------GVASLQIQEVF-PEDE 307 (356)
Q Consensus 277 l~--p~-----------------------~~~~~~~~~~~~-----------------------~~~~L~i~~v~-~~d~ 307 (356)
+. |. ..+....+.|.. ....|.|.+++ .+|+
T Consensus 80 V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~ 159 (184)
T 3b5h_A 80 LHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADP 159 (184)
T ss_dssp ECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSS
T ss_pred EecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccC
Confidence 33 11 000001333432 12489999999 9999
Q ss_pred eEEEEEEEcCCcceEEEEEEEEEe
Q psy12422 308 GVYVCTATNSLGTAETKCKLTVRS 331 (356)
Q Consensus 308 G~Y~C~a~n~~g~~~~~~~l~V~~ 331 (356)
|.|+|.|.|..|.....+.|.|+.
T Consensus 160 G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 160 GQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ceEEEEEEeCCCcceEEEEEEEec
Confidence 999999999999999999999875
No 274
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.75 E-value=3e-18 Score=139.49 Aligned_cols=71 Identities=20% Similarity=0.311 Sum_probs=50.6
Q ss_pred eecCCCeEEEEEEEcC-CCCC-eEEEEECCEEccCCCceeEEE-------eCC----EEEEEEccCCCCC-CeEEEEEEE
Q psy12422 200 TIDDGQCLDLSAVVKG-DPEP-RVSWTKNGQPLNSSNILDLKY-------KNG----VASLQIQEVFPED-EGVYVCTAT 265 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g-~p~p-~i~W~~~g~~~~~~~~~~~~~-------~~~----~~~L~i~~v~~~d-~G~Y~C~a~ 265 (356)
.+..|+.++|.|.+.| +|++ .+.|+++|..+.......... .++ .+.|.|.....+| .|.|+|.|.
T Consensus 135 ~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~ 214 (253)
T 3to4_D 135 EISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQ 214 (253)
T ss_dssp HHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEE
T ss_pred hcccCCceEEEEEEceEECCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEE
Confidence 3446789999999988 6766 799999999886532211000 111 1478888888888 779999999
Q ss_pred cCCCc
Q psy12422 266 NSLGT 270 (356)
Q Consensus 266 n~~g~ 270 (356)
|..-.
T Consensus 215 h~~l~ 219 (253)
T 3to4_D 215 FYGLS 219 (253)
T ss_dssp ECCBC
T ss_pred eCCCC
Confidence 97643
No 275
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.75 E-value=1.6e-17 Score=133.95 Aligned_cols=72 Identities=22% Similarity=0.320 Sum_probs=48.4
Q ss_pred eeecCCCeEEEEEEEcCC-CCC-eEEEEECCEEccCCCcee---EEEeCCE----EEEEEccCCCCC-CeEEEEEEEcCC
Q psy12422 199 KTIDDGQCLDLSAVVKGD-PEP-RVSWTKNGQPLNSSNILD---LKYKNGV----ASLQIQEVFPED-EGVYVCTATNSL 268 (356)
Q Consensus 199 ~~v~~g~~~~l~C~~~g~-p~p-~i~W~~~g~~~~~~~~~~---~~~~~~~----~~L~i~~v~~~d-~G~Y~C~a~n~~ 268 (356)
..+.+|+.++|.|.+.|. |.+ .+.|++||..+....... ....++. +.|.|......| .|.|+|.|.|..
T Consensus 131 ~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 131 AEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp TTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred HHcccCCceEEEEEEeeEeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 346689999999999885 655 899999999886543211 2222332 234555444444 678999999985
Q ss_pred Cc
Q psy12422 269 GT 270 (356)
Q Consensus 269 g~ 270 (356)
..
T Consensus 211 l~ 212 (238)
T 1bec_A 211 LS 212 (238)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 276
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.75 E-value=4.1e-18 Score=130.47 Aligned_cols=129 Identities=19% Similarity=0.285 Sum_probs=92.3
Q ss_pred ceeecCCCeEEEEEEEcC--CCCCeEEEEECCEEcc----------CCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 198 DKTIDDGQCLDLSAVVKG--DPEPRVSWTKNGQPLN----------SSNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 198 ~~~v~~g~~~~l~C~~~g--~p~p~i~W~~~g~~~~----------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
.+.+.+|+++.|.|.... .|.+.|.|+|++..+. ...++.+ ..++ .|.|.+++.+|+|.|+|.|.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~-~~~g--sL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEI-LANG--DLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEE-CTTS--CEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEE-CCCC--cEEEcccccccCEEEEEEEE
Confidence 356889999999995422 5567899999996542 2233333 1222 59999999999999999999
Q ss_pred cCCCce--EEEEEEecC---CCCccc------------------eeEEeCCeE------EEEEecCCCCCCeEEEEEEEc
Q psy12422 266 NSLGTA--ETKCKLTPL---NSSNIL------------------DLKYKNGVA------SLQIQEVFPEDEGVYVCTATN 316 (356)
Q Consensus 266 n~~g~~--~~~~~l~p~---~~~~~~------------------~~~~~~~~~------~L~i~~v~~~d~G~Y~C~a~n 316 (356)
|..|.. ...+.|... ..|.+. .+.|..++. .+.|..++.+|+|.|+|.|.|
T Consensus 82 n~~g~~~~~~~~~l~V~~~~~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~~i~~~~~~d~G~Y~C~a~N 161 (176)
T 1hng_A 82 STNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVN 161 (176)
T ss_dssp ETTCCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSCEEEEEEE
T ss_pred eCCCCEEEEEEEEEEEeCCCCCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcEEEEEEEccCCeEEEEEEEe
Confidence 999986 555555421 111111 566665332 356778889999999999999
Q ss_pred CCcceEEEEEEEE
Q psy12422 317 SLGTAETKCKLTV 329 (356)
Q Consensus 317 ~~g~~~~~~~l~V 329 (356)
.+|..++.+.|.+
T Consensus 162 ~~g~~~~~~~l~~ 174 (176)
T 1hng_A 162 RVSQESEMEVVNC 174 (176)
T ss_dssp TTEEEEEEECCCC
T ss_pred cCCCceecccccC
Confidence 9999988877654
No 277
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.75 E-value=3.2e-18 Score=135.78 Aligned_cols=144 Identities=10% Similarity=0.015 Sum_probs=96.0
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEE--EEEEccCCCCCCeEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVA--SLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a 264 (356)
..+|.|...+. ..+.+|++++|.|.+.+ |.+.+.|+|+|..+...... ........ .|.|.+++.+|+|.|+|.|
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGR-RLKFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSE-ECC----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccc-cCCCCcceeeEEEEcccccccCEEEEEEE
Confidence 56677877766 47999999999999987 67899999988655422110 00112234 8999999999999999999
Q ss_pred EcCCCceE----EEEEEec-CCCCcc-------------------------ceeEEeC-------------CeEEEEEec
Q psy12422 265 TNSLGTAE----TKCKLTP-LNSSNI-------------------------LDLKYKN-------------GVASLQIQE 301 (356)
Q Consensus 265 ~n~~g~~~----~~~~l~p-~~~~~~-------------------------~~~~~~~-------------~~~~L~i~~ 301 (356)
.|..|... ..+.+.. ...+.+ ..+.|.+ ....|.|.+
T Consensus 84 ~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~ 163 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGP 163 (218)
T ss_dssp EETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCS
T ss_pred EcCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEcc
Confidence 99876322 2222220 011111 0344432 357899999
Q ss_pred CCCCCCeEEEEEEEcCCc-----ceEEEEEEEEEecC
Q psy12422 302 VFPEDEGVYVCTATNSLG-----TAETKCKLTVRSTP 333 (356)
Q Consensus 302 v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~p 333 (356)
|+.+|+|.|+|.|+|..+ ..+..+.|.|.+.+
T Consensus 164 v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 164 VDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp CCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC---
T ss_pred CCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecCC
Confidence 999999999999998642 23457788888764
No 278
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.75 E-value=2.3e-17 Score=116.68 Aligned_cols=92 Identities=22% Similarity=0.359 Sum_probs=83.1
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.|...+..+.+.+|+.+.|.|.+.|+|.|.+.|+++|..+....++.+........|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 56788888888899999999999999999999999999999999877777777666678999999999999999999999
Q ss_pred CCCceEEEEEEe
Q psy12422 267 SLGTAETKCKLT 278 (356)
Q Consensus 267 ~~g~~~~~~~l~ 278 (356)
..|.....+.|.
T Consensus 85 ~~g~~~~~~~l~ 96 (114)
T 2cqv_A 85 KLGSRQAQVNLT 96 (114)
T ss_dssp SSCEEECCEEEE
T ss_pred CCCcEEEEEEEE
Confidence 999988877777
No 279
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.75 E-value=6.3e-18 Score=133.34 Aligned_cols=138 Identities=17% Similarity=0.204 Sum_probs=94.3
Q ss_pred CceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee-----------------EEEeCCEEEEEEccCCCCCCeE
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD-----------------LKYKNGVASLQIQEVFPEDEGV 259 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~-----------------~~~~~~~~~L~i~~v~~~d~G~ 259 (356)
....+.+|+++.|.|.+.+.|.+.+.|++++.......... .... ....|.|.+++.+|+|.
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~-~~~~L~i~~v~~~D~G~ 85 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY-SNGSLLFQMITMKDMGV 85 (208)
T ss_dssp ESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEEC-TTSCEEECSCCGGGCEE
T ss_pred ccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEe-cCCeEEEccccccCCeE
Confidence 34578899999999999888999999999754322111000 0001 11369999999999999
Q ss_pred EEEEEEcCC-CceEEEEEEecC---CCCccc-----------------------eeEEeC---------------CeEEE
Q psy12422 260 YVCTATNSL-GTAETKCKLTPL---NSSNIL-----------------------DLKYKN---------------GVASL 297 (356)
Q Consensus 260 Y~C~a~n~~-g~~~~~~~l~p~---~~~~~~-----------------------~~~~~~---------------~~~~L 297 (356)
|+|.+.|.. +.....+.|... ..+.+. .+.|.. .+..|
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~pp~i~W~~~g~~l~~~~~~~~~~~~~~L 165 (208)
T 3r4d_A 86 YTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSIL 165 (208)
T ss_dssp EEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTTCEEEEEETTEECCCCSSEEEETTTTEE
T ss_pred EEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCCCceEEEECCEeCCCCCCeEEcCCCCEE
Confidence 999999985 444444444411 101110 344432 33679
Q ss_pred EEecCCCCCCeEEEEEEEcCCcceEE-EEEEEEEecCCC
Q psy12422 298 QIQEVFPEDEGVYVCTATNSLGTAET-KCKLTVRSTPAA 335 (356)
Q Consensus 298 ~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~~ 335 (356)
.|.+++.+|+|.|+|.|.|..|...+ .++|.|..+|.-
T Consensus 166 ~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~ 204 (208)
T 3r4d_A 166 RIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204 (208)
T ss_dssp EESSCCGGGCEEEEEEEECTTCCEECCCEEECCC-----
T ss_pred EEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCcc
Confidence 99999999999999999999998776 889999888763
No 280
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.75 E-value=1.1e-18 Score=137.69 Aligned_cols=139 Identities=21% Similarity=0.358 Sum_probs=98.3
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEc------------cCCCceeEEEeCCEEEEEEccCCCC
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPL------------NSSNILDLKYKNGVASLQIQEVFPE 255 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~------------~~~~~~~~~~~~~~~~L~i~~v~~~ 255 (356)
.++.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+ ....++. ... ..|.|.+++.+
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~--~~L~i~~~~~~ 78 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVT--FLP--TGITFKSVTRE 78 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCE--EET--TEEECSCCCTT
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceE--eec--cEEEEeeCCHH
Confidence 3456666677888999999999999999999999999976542 1112222 222 48999999999
Q ss_pred CCeEEEEEEEcCCCce--EEEEEEecCCCCcc---------------------------ceeEEeC--------------
Q psy12422 256 DEGVYVCTATNSLGTA--ETKCKLTPLNSSNI---------------------------LDLKYKN-------------- 292 (356)
Q Consensus 256 d~G~Y~C~a~n~~g~~--~~~~~l~p~~~~~~---------------------------~~~~~~~-------------- 292 (356)
|+|.|+|.|.|..|.. ...+.+.....+.+ ..+.|..
T Consensus 79 d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~ 158 (209)
T 1nbq_A 79 DTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRA 158 (209)
T ss_dssp SCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSS
T ss_pred HCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCcccccee
Confidence 9999999999986632 23333331111100 0344432
Q ss_pred ----------CeEEEEEecCCCCCCeEEEEEEEcCCcceE--EEEEEEEE
Q psy12422 293 ----------GVASLQIQEVFPEDEGVYVCTATNSLGTAE--TKCKLTVR 330 (356)
Q Consensus 293 ----------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~ 330 (356)
..+.|.|.+++.+|+|.|+|.|.|..|... ..+.|.|+
T Consensus 159 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 159 FSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp CTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred eeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 235899999999999999999999999984 45555554
No 281
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=2e-17 Score=128.26 Aligned_cols=140 Identities=11% Similarity=0.040 Sum_probs=94.8
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
.+|.+...+.. .+.+|++++|.|.+.+ +++.+.|+|+|..+...... .........|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 46777777766 7999999999999975 45789999999876421100 011234568999999999999999999886
Q ss_pred CCc----eEEEEEEe-cCCCCccc------------------------eeEEe-------------CCeEEEEEecCCCC
Q psy12422 268 LGT----AETKCKLT-PLNSSNIL------------------------DLKYK-------------NGVASLQIQEVFPE 305 (356)
Q Consensus 268 ~g~----~~~~~~l~-p~~~~~~~------------------------~~~~~-------------~~~~~L~i~~v~~~ 305 (356)
.+. ....+.+. +...+.+. .+.|. .....|.|.+|+.+
T Consensus 80 ~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~ 159 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTA 159 (188)
T ss_dssp TEECCCCCCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECSSSCSEEEEEEESSSCEEEEEECSSEEEEEEEECCGG
T ss_pred CCCCCCCCceEEEecccCCCCeEEECCCCccccCCEEEEEEEcCCCCCEEEEEECCccccccccCCCceeEEEECCCCcC
Confidence 442 22233332 00011110 23332 24578999999999
Q ss_pred CCeEEEEEEEcCCc---ceEEEEEEEEE
Q psy12422 306 DEGVYVCTATNSLG---TAETKCKLTVR 330 (356)
Q Consensus 306 d~G~Y~C~a~n~~g---~~~~~~~l~V~ 330 (356)
|+|.|+|.|+|... ..+..+.|.|.
T Consensus 160 d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 160 HRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp GCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred CCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 99999999998752 23446777775
No 282
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.74 E-value=1e-17 Score=134.56 Aligned_cols=91 Identities=13% Similarity=0.212 Sum_probs=55.5
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCCC--CeEEEEECCEEccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEE
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDPE--PRVSWTKNGQPLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~--p~i~W~~~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C 262 (356)
+|.+........+..|+.++|.|.+.+.++ ..+.|+++|..+...........++ .+.|.|......| |.|+|
T Consensus 132 ~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC 210 (232)
T 3qhz_H 132 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 210 (232)
T ss_dssp CCEEEEECC-------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEE
T ss_pred CCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEE
Confidence 344442222334567999999999987544 3588999886432111000111111 2478999999889 99999
Q ss_pred EEEcCCCceEEEEEEecC
Q psy12422 263 TATNSLGTAETKCKLTPL 280 (356)
Q Consensus 263 ~a~n~~g~~~~~~~l~p~ 280 (356)
.|.|..+.......+.+.
T Consensus 211 ~v~~~~~~~~~~~~l~~~ 228 (232)
T 3qhz_H 211 NVNHKPSNTKVDKRVEPK 228 (232)
T ss_dssp EEEEGGGTEEEEEECCCC
T ss_pred EEEeCCCCccEEEEeCCC
Confidence 999999888887777654
No 283
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.74 E-value=1.1e-17 Score=134.79 Aligned_cols=90 Identities=17% Similarity=0.308 Sum_probs=57.6
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcC-CCCC-eEEEEECCEEccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEE
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKG-DPEP-RVSWTKNGQPLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p~p-~i~W~~~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C 262 (356)
+|.+...+....+.+|+.++|.|.+.+ +|++ .+.|+++|..+...........++ .+.|.|.....+| |.|+|
T Consensus 140 ~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC 218 (239)
T 3tv3_H 140 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 218 (239)
T ss_dssp CCEEEEECCCCCC--TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEE
T ss_pred CCEEEEECCChhhccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEE
Confidence 344443333334567999999999977 5544 488999886432111101111111 2478999999899 99999
Q ss_pred EEEcCCCceEEEEEEec
Q psy12422 263 TATNSLGTAETKCKLTP 279 (356)
Q Consensus 263 ~a~n~~g~~~~~~~l~p 279 (356)
.|.|..+.......+.+
T Consensus 219 ~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 219 NVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EEEEGGGTEEEEEECCC
T ss_pred EEEECCCCceEEEEecc
Confidence 99999988777776654
No 284
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.74 E-value=5.1e-18 Score=131.26 Aligned_cols=117 Identities=21% Similarity=0.337 Sum_probs=87.6
Q ss_pred eecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEcc-CCCCCCeEEEEEEEcCCCceEEEEEEe
Q psy12422 200 TIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQE-VFPEDEGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
...+|+++.|.|.+.+ |+ .|.|+|+|..+.... + .+|.|.+ ++.+|+|.|+|.|.|..|.....+.+.
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~-------~--~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKH-------D--KHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSCC-------C--SEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCC-------C--CEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 3467999999999987 44 499999999887541 1 2799999 999999999999999988755444442
Q ss_pred cC--CCC-------------------------------c---------------cceeEEeC----------CeEEEEEe
Q psy12422 279 PL--NSS-------------------------------N---------------ILDLKYKN----------GVASLQIQ 300 (356)
Q Consensus 279 p~--~~~-------------------------------~---------------~~~~~~~~----------~~~~L~i~ 300 (356)
+. ..+ . ...+.|.+ ....|.|.
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~p~p~i~W~k~g~~i~~~~~~~~~L~i~ 158 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLTDKTIKWLKDGSIISPLNATKNTWNLG 158 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSSSCSCEEEEETTEECCCSSCCSSCCEEE
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeCCCCeEEEEECCEECcccCCCcceEEEC
Confidence 00 000 0 00445543 34679999
Q ss_pred cCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy12422 301 EVFPEDEGVYVCTATNSLGTAETKCKLTVRST 332 (356)
Q Consensus 301 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 332 (356)
+++.+|+|.|+|.|.|..|.. |+|.++
T Consensus 159 ~v~~~D~G~Y~C~a~N~~g~~-----l~V~yr 185 (186)
T 1jbj_A 159 NNAKDPRGTYQCQGAKETSNP-----LQVYYR 185 (186)
T ss_dssp ETTSCCEEEEEEEESSCEEEE-----EEEECC
T ss_pred CCCcCcCEEEEEEEEcCcCCc-----EEEEEe
Confidence 999999999999999998876 666654
No 285
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.74 E-value=7.1e-16 Score=120.53 Aligned_cols=141 Identities=18% Similarity=0.324 Sum_probs=101.3
Q ss_pred CCceEEEEEe-ccCC---CCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 1 MQNVIKVKVG-STKP---PPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~-~g~p---~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
|+.++|+|.+ .|.| +..++|||||.++.... ..|.|..+...|+|.|+|.+.+..|.......+.|.
T Consensus 17 GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGaT---------~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtVT 87 (304)
T 3shs_A 17 GDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNT---------ATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLM 87 (304)
T ss_dssp TCCEEEEEEEEESSSCCCCEEEEEEETTEECSCCS---------SEEEESSCCGGGCEEEEEEEEETTTCCEEECCCEEE
T ss_pred CCCEEEEEEecCCCCCCCCceEEEEECCccccCCc---------ceEEeeeccccCCeEEEEEEEECCCCeeeeeeEEEe
Confidence 7899999998 5667 45799999999876321 178899999999999999999988876544333333
Q ss_pred ccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCccce
Q psy12422 77 SEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPSKKI 156 (356)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (356)
....
T Consensus 88 ~~a~---------------------------------------------------------------------------- 91 (304)
T 3shs_A 88 EEAE---------------------------------------------------------------------------- 91 (304)
T ss_dssp CBCC----------------------------------------------------------------------------
T ss_pred ccCc----------------------------------------------------------------------------
Confidence 2100
Q ss_pred eeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEE--c-CCC-----CCeEEEEECCE
Q psy12422 157 TRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVV--K-GDP-----EPRVSWTKNGQ 228 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~--~-g~p-----~p~i~W~~~g~ 228 (356)
..+.+ ..+....+..|..+.|.+.+ . |.| ...++|++|+.
T Consensus 92 --------------------l~i~i------------t~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt 139 (304)
T 3shs_A 92 --------------------LIVNI------------TEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGED 139 (304)
T ss_dssp --------------------EEEEE------------SSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTE
T ss_pred --------------------eeEEe------------cCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCe
Confidence 00000 11223345567788888887 4 455 45899999998
Q ss_pred EccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 229 PLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
.+.... .|++...+..++|.|+|++.|..+
T Consensus 140 ~IsgAq-----------~lT~sS~TateaG~YtV~VTn~~~ 169 (304)
T 3shs_A 140 VIDTTQ-----------DITIQEFTADKNGVYTVKVWGESE 169 (304)
T ss_dssp EEESSS-----------EEEECSCCGGGCEEEEEEEESSSG
T ss_pred EccCcc-----------ccceeeEEecCCeEEEEEEEcCCC
Confidence 775332 678888899999999999999977
No 286
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.73 E-value=3.1e-17 Score=113.80 Aligned_cols=94 Identities=24% Similarity=0.403 Sum_probs=84.6
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.+.......+|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 85 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTN 85 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEe
Confidence 45678888888899999999999999999999999999999999888887777777888999999999999999999999
Q ss_pred CCCceEEEEEEecC
Q psy12422 267 SLGTAETKCKLTPL 280 (356)
Q Consensus 267 ~~g~~~~~~~l~p~ 280 (356)
..|.....+.|...
T Consensus 86 ~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 86 YKGEASDYATLDVT 99 (103)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99999888877643
No 287
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.73 E-value=1.4e-17 Score=135.28 Aligned_cols=134 Identities=19% Similarity=0.316 Sum_probs=91.0
Q ss_pred cCCceeecCCCeEEEEEEEcC---CCCCeEEEEECCEEcc------------------------------CCCceeEEEe
Q psy12422 195 KLTDKTIDDGQCLDLSAVVKG---DPEPRVSWTKNGQPLN------------------------------SSNILDLKYK 241 (356)
Q Consensus 195 ~~~~~~v~~g~~~~l~C~~~g---~p~p~i~W~~~g~~~~------------------------------~~~~~~~~~~ 241 (356)
++..+.+.+|+++.|.|.+.+ .|.+.+.|++++.... ...+..+..
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~- 86 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN- 86 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-
Confidence 345678999999999999987 8889999999874421 001111110
Q ss_pred CCEEEEEEccCCCCCCeEEEEEEEcCCCce-----EEEEEEecCCC---Cccc---------------------------
Q psy12422 242 NGVASLQIQEVFPEDEGVYVCTATNSLGTA-----ETKCKLTPLNS---SNIL--------------------------- 286 (356)
Q Consensus 242 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-----~~~~~l~p~~~---~~~~--------------------------- 286 (356)
.+...|.|.+++.+|+|.|+|.|.|..+.. ...+.|..... +.+.
T Consensus 87 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p 166 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA 166 (250)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC
T ss_pred CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC
Confidence 123479999999999999999999988753 33455542111 1110
Q ss_pred eeEEeC--------------------------------------CeEEEEEecCCCCCCeEEEEEEEcCCc---ceEEEE
Q psy12422 287 DLKYKN--------------------------------------GVASLQIQEVFPEDEGVYVCTATNSLG---TAETKC 325 (356)
Q Consensus 287 ~~~~~~--------------------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g---~~~~~~ 325 (356)
.+.|.+ ....|.|.+++.+|+|.|+|.|.|..| ....++
T Consensus 167 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~ 246 (250)
T 2fbo_J 167 NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSST 246 (250)
T ss_dssp EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEE
T ss_pred eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeE
Confidence 333432 115899999999999999999999555 555555
Q ss_pred EEEE
Q psy12422 326 KLTV 329 (356)
Q Consensus 326 ~l~V 329 (356)
.|.|
T Consensus 247 ~l~V 250 (250)
T 2fbo_J 247 ILKV 250 (250)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 5543
No 288
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.73 E-value=2.1e-17 Score=131.09 Aligned_cols=137 Identities=12% Similarity=0.141 Sum_probs=94.0
Q ss_pred CCceeecCCCeEEEEEEEcCCCCCe---EEEEECCEEccCCCceeE----------------E-----EeCCEEEEEEcc
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDPEPR---VSWTKNGQPLNSSNILDL----------------K-----YKNGVASLQIQE 251 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p~p~---i~W~~~g~~~~~~~~~~~----------------~-----~~~~~~~L~i~~ 251 (356)
+..+++.+|++++|.|.+.+.|.+. |.|+|++..+........ . ......+|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 3567899999999999999888764 899997754432111100 0 011235799999
Q ss_pred CCCCCCeEEEEEEEcCCCceEEEEEEe---cCCCCcc-------------------------ceeEEeC-----------
Q psy12422 252 VFPEDEGVYVCTATNSLGTAETKCKLT---PLNSSNI-------------------------LDLKYKN----------- 292 (356)
Q Consensus 252 v~~~d~G~Y~C~a~n~~g~~~~~~~l~---p~~~~~~-------------------------~~~~~~~----------- 292 (356)
++.+|+|.|.|.+.|..+......... +...... ..+.|..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~ 165 (218)
T 4frw_A 86 AVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSF 165 (218)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEE
T ss_pred ccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceE
Confidence 999999999999998776544332222 0000000 0344432
Q ss_pred -------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy12422 293 -------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRST 332 (356)
Q Consensus 293 -------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 332 (356)
..+.|.|..+..+|+|.|+|.|+|..|..+..++|.|...
T Consensus 166 ~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~V~ 212 (218)
T 4frw_A 166 KHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILHVS 212 (218)
T ss_dssp ECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCEE
T ss_pred ecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEEEC
Confidence 1357999999999999999999999998888777776543
No 289
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.72 E-value=3.4e-17 Score=129.66 Aligned_cols=134 Identities=16% Similarity=0.247 Sum_probs=93.3
Q ss_pred ecccCCceeecCCCeEEEEEEEcCCCCCeEEEEE--CCEEcc------------CCCceeEEEeCCEEEEEEccCCCCCC
Q psy12422 192 FANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK--NGQPLN------------SSNILDLKYKNGVASLQIQEVFPEDE 257 (356)
Q Consensus 192 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~--~g~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~ 257 (356)
+...+ .+.+.+|++++|.|.+.+.|.+.+.|+| ++.... ...++......+...|.|.+++.+|+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDE 82 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhC
Confidence 44444 6789999999999999999999999998 222111 22345544566778999999999999
Q ss_pred eEEEEEEEcCCCc-----eEEEEEEe--cCCCCcc----------------------------ceeEEeCC---------
Q psy12422 258 GVYVCTATNSLGT-----AETKCKLT--PLNSSNI----------------------------LDLKYKNG--------- 293 (356)
Q Consensus 258 G~Y~C~a~n~~g~-----~~~~~~l~--p~~~~~~----------------------------~~~~~~~~--------- 293 (356)
|.|.|.|.|..+. ....+.+. +..+|.+ ..+.|.++
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 162 (213)
T 3mj8_L 83 ADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVK 162 (213)
T ss_dssp EEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE
T ss_pred EEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcc
Confidence 9999999999872 11222222 1011111 13444321
Q ss_pred -------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy12422 294 -------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 326 (356)
Q Consensus 294 -------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 326 (356)
.+.|+|.++..+|+|.|+|.|+|..+..+..+.
T Consensus 163 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 163 TTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp ECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred cCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 134889999999999999999999877666554
No 290
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.72 E-value=4.1e-17 Score=110.84 Aligned_cols=88 Identities=22% Similarity=0.331 Sum_probs=75.6
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECC--EEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNG--QPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g--~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
+|.|...+....+.+|+.+.|.|.+.|+|.|.+.|+++| ..+.... ..........|.|.+++.+|+|.|+|.|.|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 567776778889999999999999999999999999999 7776543 334456668999999999999999999999
Q ss_pred CCCceEEEEEEe
Q psy12422 267 SLGTAETKCKLT 278 (356)
Q Consensus 267 ~~g~~~~~~~l~ 278 (356)
..|....++.|.
T Consensus 80 ~~G~~~~~~~l~ 91 (93)
T 1wit_A 80 ELGEDEAIFEVI 91 (93)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCeEEEEEEEE
Confidence 999988887775
No 291
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.72 E-value=8.7e-17 Score=128.79 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=49.7
Q ss_pred ceeecCCCeEEEEEEEcCC-CC-CeEEEEE-CCEEccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 198 DKTIDDGQCLDLSAVVKGD-PE-PRVSWTK-NGQPLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 198 ~~~v~~g~~~~l~C~~~g~-p~-p~i~W~~-~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
...+.+|+.++|.|.+.|. |. +.|.|++ ||..+...........++ .+.|.|..... + |.|+|.|.|..+.
T Consensus 139 ~~~v~~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 139 VAETNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp HHHHHHHSCEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred chhhccCCcceEEEEEeeecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 3446678999999999875 75 5899999 887664321111112222 24689988876 4 9999999998875
No 292
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=1.1e-16 Score=113.88 Aligned_cols=95 Identities=19% Similarity=0.342 Sum_probs=79.7
Q ss_pred CCCCeecc---cCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEE
Q psy12422 187 MTPPQFAN---KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCT 263 (356)
Q Consensus 187 ~~~p~~~~---~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 263 (356)
..+|.+.. ......+.+|+.+.|.|.+.|+|.|.+.|+++|..+. ..++.+........|.|.+++.+|+|.|+|.
T Consensus 19 ~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 97 (118)
T 2e7c_A 19 AEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELS 97 (118)
T ss_dssp SEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEE
T ss_pred ccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEE
Confidence 55677754 2467889999999999999999999999999999987 4455556666677899999999999999999
Q ss_pred EEcCCCceEEEEEEecCCC
Q psy12422 264 ATNSLGTAETKCKLTPLNS 282 (356)
Q Consensus 264 a~n~~g~~~~~~~l~p~~~ 282 (356)
|.|..|.....+.|.+...
T Consensus 98 a~N~~G~~~~~~~l~V~~~ 116 (118)
T 2e7c_A 98 VQIENMKDTATIRIRVVEK 116 (118)
T ss_dssp EECSSCEECCEEEEEEECC
T ss_pred EEeCCCeEEEEEEEEEEcC
Confidence 9999998888888775443
No 293
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.72 E-value=5.7e-17 Score=109.56 Aligned_cols=81 Identities=17% Similarity=0.186 Sum_probs=72.6
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.|...+.+..+.+|+++.|.|.+.+ |+|.+.|+|||..+....++.+..++...+|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 45788888888999999999999999986 55889999999999988888888888888999999999999999999988
Q ss_pred CC
Q psy12422 267 SL 268 (356)
Q Consensus 267 ~~ 268 (356)
..
T Consensus 82 ~~ 83 (93)
T 1waa_A 82 TK 83 (93)
T ss_dssp EE
T ss_pred Cc
Confidence 54
No 294
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.72 E-value=1.1e-16 Score=128.81 Aligned_cols=144 Identities=10% Similarity=0.062 Sum_probs=97.8
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.+.|
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 81 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRV 81 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEec
Confidence 566888777766 7999999999999975 4568999999987642100 001122356899999999999999999988
Q ss_pred CCC----ceEEEEEEe-cCCCCccc------------------------eeEEe-------------CCeEEEEEecCCC
Q psy12422 267 SLG----TAETKCKLT-PLNSSNIL------------------------DLKYK-------------NGVASLQIQEVFP 304 (356)
Q Consensus 267 ~~g----~~~~~~~l~-p~~~~~~~------------------------~~~~~-------------~~~~~L~i~~v~~ 304 (356)
..+ +....+.+. +...+.+. .+.|. .....|.|.+|+.
T Consensus 82 ~~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~ 161 (242)
T 1p6f_A 82 GELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTT 161 (242)
T ss_dssp TTEECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTTSCSEEEEEECSSSCEEEEEECSSEEEEEEEECCG
T ss_pred CCccccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCCCCCEEEEEECCCccCccccCCCceEEEEeCCCcc
Confidence 643 222333332 00011110 33332 2457899999999
Q ss_pred CCCeEEEEEEEcCC---cceEEEEEEEEEecC
Q psy12422 305 EDEGVYVCTATNSL---GTAETKCKLTVRSTP 333 (356)
Q Consensus 305 ~d~G~Y~C~a~n~~---g~~~~~~~l~V~~~p 333 (356)
+|+|.|+|.|+|.. ...+..+.|.|.+++
T Consensus 162 ~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 162 AHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp GGCEEEEEEEEEETTEECCCCCCEEEEEEC--
T ss_pred ccCEEEEEEEECCCCcccCCCCCEEEEEeccC
Confidence 99999999999974 234557889998864
No 295
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.71 E-value=3.5e-17 Score=108.03 Aligned_cols=72 Identities=25% Similarity=0.393 Sum_probs=60.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.+ |.|.|+|||||++|..+ ++.+...++..+|.|.+++.+|+|.|+|.|.| ...++.|.|.+
T Consensus 11 G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~l~V~e 83 (84)
T 2lu7_A 11 GGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIFLVSVEE 83 (84)
T ss_dssp TSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEEEEEECC
T ss_pred CCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEEEEEEEC
Confidence 899999999966 89999999999999765 45566677778999999999999999999844 45667787764
No 296
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.71 E-value=1e-16 Score=110.28 Aligned_cols=92 Identities=29% Similarity=0.577 Sum_probs=82.9
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.+....+...|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 83 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKN 83 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEe
Confidence 45677777788889999999999999999999999999999999888888877777888999999999999999999999
Q ss_pred CCCceEEEEEEe
Q psy12422 267 SLGTAETKCKLT 278 (356)
Q Consensus 267 ~~g~~~~~~~l~ 278 (356)
..|.....+.|.
T Consensus 84 ~~g~~~~~~~l~ 95 (99)
T 3puc_A 84 SAGSVSSSCKLT 95 (99)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCcEeEEEEEE
Confidence 999988887775
No 297
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.71 E-value=1e-16 Score=110.30 Aligned_cols=93 Identities=25% Similarity=0.424 Sum_probs=80.2
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEE-EeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLK-YKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+......... ...+...|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 3 MEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEE
Confidence 34677777788889999999999999999999999999999999876655433 35667799999999999999999999
Q ss_pred cCCCceEEEEEEec
Q psy12422 266 NSLGTAETKCKLTP 279 (356)
Q Consensus 266 n~~g~~~~~~~l~p 279 (356)
|..|....++.|.+
T Consensus 83 N~~g~~~~~~~l~V 96 (99)
T 1g1c_A 83 NIAGETSSHAFLLV 96 (99)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred ECCCcEEEEEEEEE
Confidence 99999888877753
No 298
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=8e-17 Score=114.62 Aligned_cols=79 Identities=23% Similarity=0.234 Sum_probs=70.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.|.|.|.++|+|+|..+...++.+...++...|+|.+++.+|+|.|+|.|.|..|.....+.|.|.+.+
T Consensus 39 G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 39 GEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp SSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEEECCC
T ss_pred CCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEEcCC
Confidence 7899999999999999999999999998556666667777789999999999999999999999999999999987653
No 299
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=7e-17 Score=110.85 Aligned_cols=89 Identities=28% Similarity=0.384 Sum_probs=76.7
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.|...+.+..+.+|+++.|.|.+ .|.|.+.|+|||..+....++.+..++....|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 456788888889999999999999999 899999999999999988888888778788999999999999999999999
Q ss_pred CCCceEEEEEE
Q psy12422 267 SLGTAETKCKL 277 (356)
Q Consensus 267 ~~g~~~~~~~l 277 (356)
......+.+.+
T Consensus 83 ~~~~~~a~L~V 93 (100)
T 2yuz_A 83 YNVTLPAKVHV 93 (100)
T ss_dssp SCCCEEEEEEE
T ss_pred CCeeEEEEEEE
Confidence 84334444333
No 300
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.71 E-value=9.9e-17 Score=129.79 Aligned_cols=91 Identities=15% Similarity=0.250 Sum_probs=55.5
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcC-CC-CCeEEEEECCEEccCCCceeEEEeCC----EEEEEEccCCCCCCeEEEE
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKG-DP-EPRVSWTKNGQPLNSSNILDLKYKNG----VASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p-~p~i~W~~~g~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C 262 (356)
+|.+...+....+..|+.++|.|.+.+ +| ++.+.|+++|..+...........++ .+.|.|.....+| |.|+|
T Consensus 141 ~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC 219 (248)
T 3u2s_H 141 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 219 (248)
T ss_dssp CCEEEEECCC------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEE
T ss_pred CCEEEEeCCCccccCCCcEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEE
Confidence 344443333334567999999999976 55 35699999886432111000111111 2478899988888 99999
Q ss_pred EEEcCCCceEEEEEEecC
Q psy12422 263 TATNSLGTAETKCKLTPL 280 (356)
Q Consensus 263 ~a~n~~g~~~~~~~l~p~ 280 (356)
.|.|..+.......+.+.
T Consensus 220 ~v~h~~~~~~~~~~l~~~ 237 (248)
T 3u2s_H 220 NVNHKPSNTKVDKKVEPK 237 (248)
T ss_dssp EEEEGGGTEEEEEECCC-
T ss_pred EEEECCCCcceEEEEccC
Confidence 999999888777777643
No 301
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.71 E-value=7.7e-17 Score=138.70 Aligned_cols=163 Identities=13% Similarity=0.134 Sum_probs=105.6
Q ss_pred CCceEEEEEeccC-CCC---eeEEeeCCEEcccCC--eeEEecC----CeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE
Q psy12422 1 MQNVIKVKVGSTK-PPP---TVKWYKGNRELSKRD--YSMSYSD----GVVSMEIIDCKPEDSGEYKCVATNKHGTDETN 70 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~---~v~W~k~g~~l~~~~--~~~~~~~----~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 70 (356)
|++++|.|.+.|. |.| .|+|||++..+.... ......+ ....|+|..++.+|+|.|+|.+.+..+.....
T Consensus 183 g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~ 262 (376)
T 2aty_A 183 TLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIE 262 (376)
T ss_pred CCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCCceE
Confidence 6899999999887 333 699999987664211 1111122 23379999999999999999998876533222
Q ss_pred EEEEEeccccchhhhhhcccccccCccceeeecccCCceeeecccccccCCccccCCCCceEEEEeeccccccccccccC
Q psy12422 71 CVVIVESEEESKEQQELAHNFLYSGDRKYIEKHIRPAPAIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNAT 150 (356)
Q Consensus 71 ~~l~v~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~p~p~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (356)
..+.+..
T Consensus 263 ~~v~~~~------------------------------------------------------------------------- 269 (376)
T 2aty_A 263 KTISKTK------------------------------------------------------------------------- 269 (376)
T ss_pred EEEcCCC-------------------------------------------------------------------------
Confidence 2211100
Q ss_pred CCccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCCC--CCeEEEEECCE
Q psy12422 151 SPSKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNGQ 228 (356)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g~ 228 (356)
....+|.+...+......+|+.++|.|.+.|++ .+.|+|+|||.
T Consensus 270 ----------------------------------~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~ 315 (376)
T 2aty_A 270 ----------------------------------GRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQ 315 (376)
T ss_pred ----------------------------------CCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCE
Confidence 002345554444444445689999999999864 35799999998
Q ss_pred EccCCCceeE--EEeCC---EEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 229 PLNSSNILDL--KYKNG---VASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 229 ~~~~~~~~~~--~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
.+........ ..++. .+.|.|.....+|.|.|+|+|.|..-.
T Consensus 316 ~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 316 PAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred ECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCCC
Confidence 8753222111 11111 246788888888899999999998764
No 302
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.70 E-value=1e-16 Score=126.89 Aligned_cols=131 Identities=19% Similarity=0.275 Sum_probs=91.5
Q ss_pred ccCCceeecCCCeEEEEEEEcCCCCCeEEEEECC--EEc------------cCCCceeEEEeCCEEEEEEccCCCCCCeE
Q psy12422 194 NKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNG--QPL------------NSSNILDLKYKNGVASLQIQEVFPEDEGV 259 (356)
Q Consensus 194 ~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g--~~~------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 259 (356)
..+..+.+.+|+++.|.|.+.+.|.+.|.|+|++ ..+ ....++.....++...|.|.+++.+|+|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 85 (213)
T 3d9a_L 6 QSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGM 85 (213)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEE
Confidence 3456778999999999999999999999999843 211 11245555556667899999999999999
Q ss_pred EEEEEEcCCCceEE---EEEEec-CCCCcc----------------------------ceeEEeC-------C-------
Q psy12422 260 YVCTATNSLGTAET---KCKLTP-LNSSNI----------------------------LDLKYKN-------G------- 293 (356)
Q Consensus 260 Y~C~a~n~~g~~~~---~~~l~p-~~~~~~----------------------------~~~~~~~-------~------- 293 (356)
|+|.|.|..+.... .+.+.. ...|.+ ..+.|.+ .
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 165 (213)
T 3d9a_L 86 YFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTD 165 (213)
T ss_dssp EEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECC
T ss_pred EEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCC
Confidence 99999998764321 222220 001110 0244432 1
Q ss_pred ----------eEEEEEecCCCCCCeEEEEEEEcCCcceEEE
Q psy12422 294 ----------VASLQIQEVFPEDEGVYVCTATNSLGTAETK 324 (356)
Q Consensus 294 ----------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 324 (356)
.+.|.|.++..+|+|.|+|.|.|........
T Consensus 166 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 206 (213)
T 3d9a_L 166 QDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIV 206 (213)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEE
T ss_pred ccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceE
Confidence 2389999999999999999999987664333
No 303
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.70 E-value=4.4e-16 Score=106.59 Aligned_cols=89 Identities=19% Similarity=0.409 Sum_probs=78.5
Q ss_pred ecccCCceeecCCCeEEEEEEEcCC-CCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCc
Q psy12422 192 FANKLTDKTIDDGQCLDLSAVVKGD-PEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGT 270 (356)
Q Consensus 192 ~~~~~~~~~v~~g~~~~l~C~~~g~-p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 270 (356)
+...+.+..+.+|+.+.|.|.+.|. |.|.+.|++++..+....++.+...++...|.|.+++.+|+|.|+|.|.|..|.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGE 83 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCe
Confidence 3344567889999999999999997 899999999999998888877777778889999999999999999999999999
Q ss_pred eEEEEEEecC
Q psy12422 271 AETKCKLTPL 280 (356)
Q Consensus 271 ~~~~~~l~p~ 280 (356)
....+.|...
T Consensus 84 ~~~~~~l~V~ 93 (97)
T 2bk8_A 84 DSSYAELFVK 93 (97)
T ss_dssp EEEEEEEEET
T ss_pred EeEEEEEEEE
Confidence 9888877644
No 304
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.70 E-value=9.2e-17 Score=113.58 Aligned_cols=82 Identities=17% Similarity=0.287 Sum_probs=71.6
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.|.|.|.++|||+|..+... ++.+...++...|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+.+
T Consensus 22 G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 101 (114)
T 2cqv_A 22 GESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKP 101 (114)
T ss_dssp TCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEECSC
T ss_pred CCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEEECCC
Confidence 789999999999999999999999988754 4555555667799999999999999999999999999999999998765
Q ss_pred cch
Q psy12422 80 ESK 82 (356)
Q Consensus 80 ~~~ 82 (356)
..+
T Consensus 102 ~~P 104 (114)
T 2cqv_A 102 DPP 104 (114)
T ss_dssp SCC
T ss_pred CCC
Confidence 543
No 305
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.70 E-value=4.1e-17 Score=130.85 Aligned_cols=66 Identities=15% Similarity=0.177 Sum_probs=45.0
Q ss_pred CCceEEEEEeccCC----CCeeEEeeCCEEcccCCe--eEEecCCe----EEEEEeeCCCCCCeEEEEEEEeCCce
Q psy12422 1 MQNVIKVKVGSTKP----PPTVKWYKGNRELSKRDY--SMSYSDGV----VSMEIIDCKPEDSGEYKCVATNKHGT 66 (356)
Q Consensus 1 g~~v~l~C~~~g~p----~~~v~W~k~g~~l~~~~~--~~~~~~~~----~~L~i~~~~~~D~G~Y~C~a~n~~g~ 66 (356)
|+++.|.|.+.|.+ ...|+|+|||+++..... .....++. ..|.|.....+|.|.|+|.|.|..+.
T Consensus 39 g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~ 114 (240)
T 4acp_A 39 SRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALP 114 (240)
T ss_dssp SSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC---
T ss_pred CCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCC
Confidence 67899999998864 237999999999854321 11122332 36788777777899999999997653
No 306
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.70 E-value=9.6e-17 Score=113.17 Aligned_cols=80 Identities=13% Similarity=0.240 Sum_probs=66.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCe-eEEecC-------CeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDY-SMSYSD-------GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCV 72 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~-~~~~~~-------~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 72 (356)
+..+.|.|.+.|+|.|.|+|||||.+|..+.+ ...... ....|.|.+++..|+|.|+|.|.|..|.+..++.
T Consensus 15 ~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~ 94 (126)
T 1he7_A 15 MHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIM 94 (126)
T ss_dssp CCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEE
Confidence 35688999999999999999999999986543 222211 2358999999999999999999999999999999
Q ss_pred EEEecccc
Q psy12422 73 VIVESEEE 80 (356)
Q Consensus 73 l~v~~~~~ 80 (356)
|.|.+.+.
T Consensus 95 l~v~~~P~ 102 (126)
T 1he7_A 95 AAFMDNPF 102 (126)
T ss_dssp ECCCSCTT
T ss_pred EEEEcCCC
Confidence 98876543
No 307
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.70 E-value=1e-16 Score=111.99 Aligned_cols=94 Identities=34% Similarity=0.546 Sum_probs=84.0
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.+..++....|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 56788888888899999999999999999999999999999999887777777777778999999999999999999999
Q ss_pred CCCceEEEEEEecC
Q psy12422 267 SLGTAETKCKLTPL 280 (356)
Q Consensus 267 ~~g~~~~~~~l~p~ 280 (356)
..|.....+.|...
T Consensus 91 ~~g~~~~~~~l~V~ 104 (107)
T 3irg_B 91 AAGEAYAAAAVTVL 104 (107)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99998888877644
No 308
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.70 E-value=7e-17 Score=128.75 Aligned_cols=135 Identities=15% Similarity=0.176 Sum_probs=88.7
Q ss_pred ceeecCCCeEEEEEEEcCCCCCe---EEEEECCEEccCC----------------CceeE-------EEeCCEEEEEEcc
Q psy12422 198 DKTIDDGQCLDLSAVVKGDPEPR---VSWTKNGQPLNSS----------------NILDL-------KYKNGVASLQIQE 251 (356)
Q Consensus 198 ~~~v~~g~~~~l~C~~~g~p~p~---i~W~~~g~~~~~~----------------~~~~~-------~~~~~~~~L~i~~ 251 (356)
.+.+..|++++|.|.+.+.|.+. |.|+|++..+... .+... ....+..+|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 45788999999999999887764 8999976433110 00000 0112335799999
Q ss_pred CCCCCCeEEEEEEEcCCCceEEEEEEe-cCCCCccc---------------------------eeEEeC-----------
Q psy12422 252 VFPEDEGVYVCTATNSLGTAETKCKLT-PLNSSNIL---------------------------DLKYKN----------- 292 (356)
Q Consensus 252 v~~~d~G~Y~C~a~n~~g~~~~~~~l~-p~~~~~~~---------------------------~~~~~~----------- 292 (356)
++.+|+|.|.|.|.|..+......... ....+... .+.|..
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~ 169 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQE 169 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEE
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcce
Confidence 999999999999999887654433222 00000000 222211
Q ss_pred ---------CeEEEEEecCCCCCCeEEEEEEEcCCcceEE--EEEEEEEec
Q psy12422 293 ---------GVASLQIQEVFPEDEGVYVCTATNSLGTAET--KCKLTVRST 332 (356)
Q Consensus 293 ---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~~ 332 (356)
..+.|.|..+..+|+|.|+|.|+|..|.... +++|.|++.
T Consensus 170 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y~ 220 (225)
T 4fmk_A 170 PGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRYH 220 (225)
T ss_dssp ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTTC
T ss_pred EEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEEC
Confidence 1246999999999999999999999887644 556666553
No 309
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.70 E-value=6.6e-16 Score=123.02 Aligned_cols=139 Identities=16% Similarity=0.211 Sum_probs=92.4
Q ss_pred CCceeecCCCeEEEEEEEcCCCC-----CeEEEEECCEEccC---------------CCceeEEE---eCCEEEEEEccC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDPE-----PRVSWTKNGQPLNS---------------SNILDLKY---KNGVASLQIQEV 252 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p~-----p~i~W~~~g~~~~~---------------~~~~~~~~---~~~~~~L~i~~v 252 (356)
+..+.+.+|+++.|.|.+.+.|. +.+.|++++..+.. ..+..+.. ..+...|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 35567899999999999988774 37999997633210 01111111 124568999999
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEecCCCCcc--------------------------ceeEEeCC-e-----------
Q psy12422 253 FPEDEGVYVCTATNSLGTAETKCKLTPLNSSNI--------------------------LDLKYKNG-V----------- 294 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~--------------------------~~~~~~~~-~----------- 294 (356)
+.+|+|.|+|.|.| .+.....+.|.+..++.. ..+.|..+ .
T Consensus 88 ~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~ 166 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTN 166 (222)
T ss_dssp CGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEE
T ss_pred ccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEE
Confidence 99999999999999 565555555542211100 03444432 0
Q ss_pred -----E---EEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCC
Q psy12422 295 -----A---SLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAA 335 (356)
Q Consensus 295 -----~---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 335 (356)
. .+.+..+..+|+|.|+|.|.|..|..+..+.|.|.++|..
T Consensus 167 ~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 215 (222)
T 3sbw_C 167 SKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLA 215 (222)
T ss_dssp CC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC---
T ss_pred EcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCccc
Confidence 1 1122245678999999999999999999999999877653
No 310
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.69 E-value=1.4e-16 Score=129.55 Aligned_cols=76 Identities=21% Similarity=0.340 Sum_probs=51.8
Q ss_pred CceeecCCCeEEEEEEEcCC-CCC-eEEEEECCEEccCCCcee---EE----EeCC----EEEEEEccCCCC-CCeEEEE
Q psy12422 197 TDKTIDDGQCLDLSAVVKGD-PEP-RVSWTKNGQPLNSSNILD---LK----YKNG----VASLQIQEVFPE-DEGVYVC 262 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~-p~p-~i~W~~~g~~~~~~~~~~---~~----~~~~----~~~L~i~~v~~~-d~G~Y~C 262 (356)
....+.+|+.++|.|.+.|. |.+ .|.|++||..+....... .. ..++ .+.|.|...... |.|.|+|
T Consensus 131 ~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC 210 (252)
T 1oga_E 131 SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRC 210 (252)
T ss_dssp CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEE
T ss_pred ChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEE
Confidence 33445679999999999875 654 899999999876542211 00 0111 235888777664 5789999
Q ss_pred EEEcCCCceE
Q psy12422 263 TATNSLGTAE 272 (356)
Q Consensus 263 ~a~n~~g~~~ 272 (356)
.|.|......
T Consensus 211 ~v~~~~l~~~ 220 (252)
T 1oga_E 211 QVQFYGLSEN 220 (252)
T ss_dssp EEEECCBCTT
T ss_pred EEEcCCCCCC
Confidence 9999876543
No 311
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.69 E-value=5e-17 Score=109.05 Aligned_cols=79 Identities=22% Similarity=0.410 Sum_probs=67.7
Q ss_pred CCCeecccCCce--eecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 188 TPPQFANKLTDK--TIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 188 ~~p~~~~~~~~~--~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
.|+.+..++.+. .+.+|+++.|.|.+.+ |.|.+.|+|||..+..+.++.+..+++..+|.|.+++.+|+|.|+|.|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 456666555554 4568999999999965 8899999999999999888888888888899999999999999999997
Q ss_pred cC
Q psy12422 266 NS 267 (356)
Q Consensus 266 n~ 267 (356)
|.
T Consensus 82 n~ 83 (91)
T 2lvc_A 82 DE 83 (91)
T ss_dssp SC
T ss_pred ce
Confidence 65
No 312
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.69 E-value=2.3e-16 Score=108.46 Aligned_cols=77 Identities=23% Similarity=0.314 Sum_probs=67.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC-eeE-EecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD-YSM-SYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-~~~-~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.+.|||+|..+.... +.. ...++..+|.|.+++.+|+|.|+|.|.|..|...+.+.|.|.+
T Consensus 20 G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 20 GSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQA 98 (99)
T ss_dssp TSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEEEec
Confidence 7899999999999999999999999997653 222 2356677999999999999999999999999999999998864
No 313
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.69 E-value=2.5e-16 Score=109.17 Aligned_cols=78 Identities=32% Similarity=0.554 Sum_probs=69.6
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.|.+.|+|+|..+... ++.+...++..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+.
T Consensus 23 G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 23 GQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp TCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEEECC
Confidence 789999999999999999999999999754 455566667779999999999999999999999999999999998753
No 314
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.69 E-value=1.1e-16 Score=108.69 Aligned_cols=75 Identities=27% Similarity=0.262 Sum_probs=65.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--EEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--RELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
|+++.|.|.+.|.|.|.|+|+|+| ..+.... ......+...|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 17 G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 17 GFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL-LVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp TBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS-EEEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE-EEEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEEEEC
Confidence 789999999999999999999999 8886543 34445666789999999999999999999999999988888773
No 315
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.69 E-value=1.9e-17 Score=139.91 Aligned_cols=128 Identities=13% Similarity=0.218 Sum_probs=83.8
Q ss_pred cccCCceeecCCCeEEEEEEEcCC-CCC---eEEEEECC-EEccCCCceeEEEeC----CEEEEEEccCCCCCCeEEEEE
Q psy12422 193 ANKLTDKTIDDGQCLDLSAVVKGD-PEP---RVSWTKNG-QPLNSSNILDLKYKN----GVASLQIQEVFPEDEGVYVCT 263 (356)
Q Consensus 193 ~~~~~~~~v~~g~~~~l~C~~~g~-p~p---~i~W~~~g-~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~ 263 (356)
...+....+.+|+++.|.|.+.|. |.| .|.|++++ ..+............ ..+.|.|.+++.+|+|.|+|.
T Consensus 117 ~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~ 196 (323)
T 2wqr_A 117 LSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCR 196 (323)
T ss_dssp ECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEE
T ss_pred EcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEE
Confidence 444555568899999999999875 556 89999964 444322211110111 234799999999999999999
Q ss_pred EEcCCCceEEEEEEe--------------cCC------------------CCccceeEEeCC------------------
Q psy12422 264 ATNSLGTAETKCKLT--------------PLN------------------SSNILDLKYKNG------------------ 293 (356)
Q Consensus 264 a~n~~g~~~~~~~l~--------------p~~------------------~~~~~~~~~~~~------------------ 293 (356)
|.|..+.......+. +.. .+....+.|.++
T Consensus 197 a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~ 276 (323)
T 2wqr_A 197 VTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTK 276 (323)
T ss_dssp EECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECS
T ss_pred EECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCC
Confidence 999875432222221 000 000003444321
Q ss_pred ------eEEEEEecCCCCCCeEEEEEEEcCCcc
Q psy12422 294 ------VASLQIQEVFPEDEGVYVCTATNSLGT 320 (356)
Q Consensus 294 ------~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 320 (356)
.+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 277 ~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 277 GSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp SSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred CCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 146899999999999999999998876
No 316
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.69 E-value=3.2e-16 Score=117.05 Aligned_cols=107 Identities=30% Similarity=0.571 Sum_probs=80.3
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+....++.+...
T Consensus 39 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~------------------------- 93 (154)
T 1fhg_A 39 HVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYD------------------------- 93 (154)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEC-------------------------
T ss_pred CCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEEC-------------------------
Confidence 5678888888889999999999999999999999999999987754332211100
Q ss_pred CCCceEEEEEEecCCCCccceeEEeCCeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCCCCCCCC
Q psy12422 267 SLGTAETKCKLTPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAANLGKSPS 342 (356)
Q Consensus 267 ~~g~~~~~~~l~p~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~ 342 (356)
......|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|++...+..-
T Consensus 94 ------------------------~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~~~~~~g 145 (154)
T 1fhg_A 94 ------------------------EEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETMGKEGEGEGEG 145 (154)
T ss_dssp ------------------------TTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC----------
T ss_pred ------------------------CCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEEeCcCcCCCCCCCC
Confidence 0134689999999999999999999999999999999999999887665543
No 317
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.69 E-value=1.4e-16 Score=109.85 Aligned_cols=94 Identities=33% Similarity=0.580 Sum_probs=79.2
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeE-EEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDL-KYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+........ ....+...|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (100)
T 2kdg_A 3 MGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAK 82 (100)
T ss_dssp CEEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEE
Confidence 4567777777888999999999999999999999999999999877654333 334555799999999999999999999
Q ss_pred cCCCceEEEEEEecC
Q psy12422 266 NSLGTAETKCKLTPL 280 (356)
Q Consensus 266 n~~g~~~~~~~l~p~ 280 (356)
|..|....++.|...
T Consensus 83 n~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 83 NRAGEATFTVQLDVL 97 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEE
Confidence 999998888887643
No 318
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.69 E-value=1e-16 Score=105.73 Aligned_cols=71 Identities=28% Similarity=0.451 Sum_probs=64.3
Q ss_pred CceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
.++.+.+|+++.|.|.+.+ |.|.+.|+|||..+..+.++.+..+++..+|.|.+++.+|+|.|+|.|.|..
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~ 74 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDS 74 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTTC
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCEE
Confidence 5678999999999999976 9999999999999999888888888888899999999999999999996653
No 319
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.68 E-value=6.7e-18 Score=133.73 Aligned_cols=71 Identities=14% Similarity=0.228 Sum_probs=48.3
Q ss_pred eecCCCeEEEEEEEcCC-CC-CeEEEEECCEEccCCCcee---EEE---eCC----EEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 200 TIDDGQCLDLSAVVKGD-PE-PRVSWTKNGQPLNSSNILD---LKY---KNG----VASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g~-p~-p~i~W~~~g~~~~~~~~~~---~~~---~~~----~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
.+.+|+.++|.|.+.|+ |+ +.|.|+|||..+....... ... .++ .+.|.|.....+|.|.|+|+|.|.
T Consensus 118 ~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~ 197 (214)
T 1ow0_A 118 ELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHE 197 (214)
T ss_dssp TTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECT
T ss_pred HhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECC
Confidence 46679999999999885 54 4899999999886542111 111 122 134555555445689999999998
Q ss_pred CCc
Q psy12422 268 LGT 270 (356)
Q Consensus 268 ~g~ 270 (356)
...
T Consensus 198 ~l~ 200 (214)
T 1ow0_A 198 ALP 200 (214)
T ss_dssp TCT
T ss_pred CCC
Confidence 754
No 320
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.68 E-value=3.5e-16 Score=126.88 Aligned_cols=150 Identities=12% Similarity=0.164 Sum_probs=95.5
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee-EEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD-LKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
..+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+....... .........|.|.+++.+|+|.|+|.|.
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 56677777665 67899999999999974 567899999886543111000 0001234689999999999999999998
Q ss_pred cCCC-------ceEEEEEEec-CCCCcc--------c----------------eeEEeC------------------CeE
Q psy12422 266 NSLG-------TAETKCKLTP-LNSSNI--------L----------------DLKYKN------------------GVA 295 (356)
Q Consensus 266 n~~g-------~~~~~~~l~p-~~~~~~--------~----------------~~~~~~------------------~~~ 295 (356)
|..+ +....+.+.. ...+.+ . .+.|.+ ...
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~ 162 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKVNGTFQA 162 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSSCCSEEEEEETTSSCEECCBCBCCSSSCCBE
T ss_pred ccCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCCCCcEEEEEECCcccCcccccccccCCceeE
Confidence 6431 2223333331 011110 0 344432 257
Q ss_pred EEEEecCCCCCCeEEEEEEEcCCc-----ceEEEEEEEEEecCCCCCCCCC
Q psy12422 296 SLQIQEVFPEDEGVYVCTATNSLG-----TAETKCKLTVRSTPAANLGKSP 341 (356)
Q Consensus 296 ~L~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~p~~~~~~~~ 341 (356)
.|.|.+|+ |+|.|+|.|+|..+ ..+..+.|.|.++|... .|.|
T Consensus 163 ~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~-~p~~ 210 (257)
T 1b6u_A 163 DFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNS-WPSP 210 (257)
T ss_dssp EEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC--------
T ss_pred EEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCC-CCCC
Confidence 89999998 99999999998632 23457889999998765 4444
No 321
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.68 E-value=1.9e-16 Score=108.94 Aligned_cols=93 Identities=31% Similarity=0.603 Sum_probs=78.5
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCc-eeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNI-LDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+..... +.....++..+|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (99)
T 1u2h_A 3 KAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAV 82 (99)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEE
Confidence 3467777778888999999999999999999999999999999876543 333344556689999999999999999999
Q ss_pred cCCCceEEEEEEec
Q psy12422 266 NSLGTAETKCKLTP 279 (356)
Q Consensus 266 n~~g~~~~~~~l~p 279 (356)
|..|.....+.|.+
T Consensus 83 N~~g~~~~~~~l~V 96 (99)
T 1u2h_A 83 NEYGARQCEARLEV 96 (99)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred ECCCceeEEEEEEE
Confidence 99999888877753
No 322
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.68 E-value=6.2e-17 Score=112.64 Aligned_cols=93 Identities=27% Similarity=0.417 Sum_probs=83.2
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+....+.+|+++.|.|.+.|.|.|.+.|+++|..+....++.+.......+|.|.+++.+|+|.|+|.|.|
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 66788888888999999999999999999999999999999988877777776666678999999999999999999999
Q ss_pred CCCceEEEEEEec
Q psy12422 267 SLGTAETKCKLTP 279 (356)
Q Consensus 267 ~~g~~~~~~~l~p 279 (356)
..|.....+.|.+
T Consensus 92 ~~G~~~~~~~l~V 104 (106)
T 1nct_A 92 SEGKQEAEFTLTI 104 (106)
T ss_dssp SSCBCCEEEEEEE
T ss_pred CCCeEEEEEEEEE
Confidence 9999888777753
No 323
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=1.2e-16 Score=116.19 Aligned_cols=76 Identities=24% Similarity=0.271 Sum_probs=65.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC----------------------------EEcc--cCCeeEEecCCeEEEEEeeCCC
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN----------------------------RELS--KRDYSMSYSDGVVSMEIIDCKP 50 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g----------------------------~~l~--~~~~~~~~~~~~~~L~i~~~~~ 50 (356)
|++++|.|.+.|.|.|.|+|+|+| ..+. ..++.+...+....|.|.+++.
T Consensus 33 G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L~I~~v~~ 112 (139)
T 1gxe_A 33 GNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEK 112 (139)
T ss_dssp SSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEEECSCCCT
T ss_pred CCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEEEECCCCc
Confidence 789999999999999999999998 5552 2344455556667899999999
Q ss_pred CCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 51 EDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 51 ~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
+|+|.|+|.|.|..|.+...+.|.|.
T Consensus 113 ~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 113 EDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp TTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred ccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 99999999999999999999998885
No 324
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.68 E-value=3.9e-16 Score=125.02 Aligned_cols=78 Identities=19% Similarity=0.305 Sum_probs=53.4
Q ss_pred eecCCCeEEEEEEEcC-CC-CCeEEEEECCEEccCCCcee--EEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 200 TIDDGQCLDLSAVVKG-DP-EPRVSWTKNGQPLNSSNILD--LKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g-~p-~p~i~W~~~g~~~~~~~~~~--~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
.+.+|+.++|.|.+.+ +| .+.+.| ++..+....... ....++ .+.|.|.....+| |.|+|.|.|..+..
T Consensus 139 ~~~~g~~v~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~ 215 (230)
T 3n9g_H 139 KSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 215 (230)
T ss_dssp CCCTTCEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTE
T ss_pred cccCCCCEEEEEEEEeEECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCc
Confidence 4568999999999977 44 346999 554443211000 011111 2479999999999 99999999999887
Q ss_pred EEEEEEecC
Q psy12422 272 ETKCKLTPL 280 (356)
Q Consensus 272 ~~~~~l~p~ 280 (356)
.....+.+.
T Consensus 216 ~~~~~~~v~ 224 (230)
T 3n9g_H 216 KVDKRVEPK 224 (230)
T ss_dssp EEEEECCCC
T ss_pred ceEEEccCC
Confidence 777777644
No 325
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.68 E-value=3.5e-16 Score=107.78 Aligned_cols=78 Identities=24% Similarity=0.345 Sum_probs=68.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC--eeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD--YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.|.+.|+|+|..+.... ......++..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+.
T Consensus 20 G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 20 GRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp TCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEEEec
Confidence 7899999999999999999999999987542 33445566679999999999999999999999999999999998753
No 326
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.68 E-value=8.1e-16 Score=108.44 Aligned_cols=93 Identities=19% Similarity=0.323 Sum_probs=73.5
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeC-------CEEEEEEccCCCCCCeE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKN-------GVASLQIQEVFPEDEGV 259 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~-------~~~~L~i~~v~~~d~G~ 259 (356)
..||.|.+. . ...+..+.|.|.+.|+|.|.|+|+|||..+....+....... ..+.|.|.+++..|+|.
T Consensus 2 ~~pP~I~l~-~---~~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 77 (126)
T 1he7_A 2 HMPASVQLH-T---AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGN 77 (126)
T ss_dssp CCCCCCCCC-C---CCCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEE
T ss_pred CCCCEEEcc-C---CccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEE
Confidence 356665222 1 336778999999999999999999999999887665443322 24689999999999999
Q ss_pred EEEEEEcCCCceEEEEEEecCCCC
Q psy12422 260 YVCTATNSLGTAETKCKLTPLNSS 283 (356)
Q Consensus 260 Y~C~a~n~~g~~~~~~~l~p~~~~ 283 (356)
|+|+|.|..|.+.+++.+.....|
T Consensus 78 YtC~A~N~~G~~~~t~~l~v~~~P 101 (126)
T 1he7_A 78 YTLLAANPFGQASASIMAAFMDNP 101 (126)
T ss_dssp EEEEEEETTEEEEEEEEECCCSCT
T ss_pred EEEEEEECCCeEEEEEEEEEEcCC
Confidence 999999999999999998754433
No 327
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.68 E-value=6.1e-16 Score=109.47 Aligned_cols=95 Identities=24% Similarity=0.445 Sum_probs=80.9
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccC-CCceeEEEeC-CEEEEEEccCCCCCCeEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNS-SNILDLKYKN-GVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~-~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
..+|.|...+.++.+.+|+++.|.|.+.|.|.|.+.|++++..+.. ..++.+.... +..+|.|.+++.+|+|.|+|.|
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 5678888888899999999999999999999999999999999875 3455444433 4568999999999999999999
Q ss_pred EcCCCceEEEEEEecCC
Q psy12422 265 TNSLGTAETKCKLTPLN 281 (356)
Q Consensus 265 ~n~~g~~~~~~~l~p~~ 281 (356)
.|..|.....+.|.+..
T Consensus 93 ~N~~G~~~~~~~l~V~~ 109 (116)
T 2kkq_A 93 VNEAGVTTCNTRLDVTA 109 (116)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EcCCCeEEEEEEEEEeC
Confidence 99999998888887443
No 328
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.68 E-value=3.9e-16 Score=107.60 Aligned_cols=91 Identities=24% Similarity=0.575 Sum_probs=78.4
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccC--CCceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNS--SNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.........+|.|.+++.+|+|.|+|.|.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 457777777888999999999999999999999999999999863 345556666667899999999999999999999
Q ss_pred cCCCceEEEEEEe
Q psy12422 266 NSLGTAETKCKLT 278 (356)
Q Consensus 266 n~~g~~~~~~~l~ 278 (356)
|..|.....+.|.
T Consensus 84 n~~g~~~~~~~l~ 96 (100)
T 3irg_A 84 NEFGSDSATVNIH 96 (100)
T ss_dssp ETTEEEEEEEEEE
T ss_pred eCCCcEEEEEEEE
Confidence 9999988877775
No 329
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.2e-16 Score=112.31 Aligned_cols=101 Identities=30% Similarity=0.517 Sum_probs=80.4
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+..+.+.+|+.+.|.|.+.|+|.|.+.|+++|..+..........
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~-------------------------- 60 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLV-------------------------- 60 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEE--------------------------
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEE--------------------------
Confidence 567888888888999999999999999999999999999987765332211100
Q ss_pred CCCceEEEEEEecCCCCccceeEEeCCeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 267 SLGTAETKCKLTPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 267 ~~g~~~~~~~l~p~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
...+...|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.++|..+
T Consensus 61 -----------------------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~P 107 (110)
T 2dm3_A 61 -----------------------RENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKESGP 107 (110)
T ss_dssp -----------------------CTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEEECCCCSS
T ss_pred -----------------------ecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEEeCCCCCC
Confidence 01124578999999999999999999999998888999999888765
No 330
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.68 E-value=6.4e-16 Score=105.78 Aligned_cols=78 Identities=28% Similarity=0.480 Sum_probs=69.1
Q ss_pred CCceEEEEEeccC-CCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTK-PPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~-p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|. |.|.+.|||++..+... ++.+...++...|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+.
T Consensus 16 G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 95 (97)
T 2bk8_A 16 GGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVKGV 95 (97)
T ss_dssp TCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEETTT
T ss_pred CCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEEEEec
Confidence 7899999999997 99999999999999754 455556777789999999999999999999999999999999988753
No 331
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.67 E-value=4.1e-16 Score=107.25 Aligned_cols=77 Identities=22% Similarity=0.435 Sum_probs=66.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC--eeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD--YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.|.|+|+|..+.... +.....++..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 20 G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 20 GQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRG 98 (99)
T ss_dssp TCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEEEEEC
Confidence 7899999999999999999999999987542 3334455667899999999999999999999999999999998864
No 332
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.67 E-value=7.5e-17 Score=128.54 Aligned_cols=144 Identities=19% Similarity=0.229 Sum_probs=90.3
Q ss_pred ceeecCCCeEEEEEEEcCCCC-----CeEEEEECCEEcc-------------CCCceeEEE---eCCEEEEEEccCCCCC
Q psy12422 198 DKTIDDGQCLDLSAVVKGDPE-----PRVSWTKNGQPLN-------------SSNILDLKY---KNGVASLQIQEVFPED 256 (356)
Q Consensus 198 ~~~v~~g~~~~l~C~~~g~p~-----p~i~W~~~g~~~~-------------~~~~~~~~~---~~~~~~L~i~~v~~~d 256 (356)
.+.+.+|+++.|.|.+.+.|. +.+.|++++.... ...+..+.. ..+...|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 356789999999999988764 6799999763321 011111110 1124579999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEecCC---CCcc--------------------------ceeEEeCC--------------
Q psy12422 257 EGVYVCTATNSLGTAETKCKLTPLN---SSNI--------------------------LDLKYKNG-------------- 293 (356)
Q Consensus 257 ~G~Y~C~a~n~~g~~~~~~~l~p~~---~~~~--------------------------~~~~~~~~-------------- 293 (356)
+|.|+|.+.|.. .....+.+.+.. .+.+ ..+.|..+
T Consensus 84 ~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~ 162 (222)
T 4i0k_A 84 EGSYTCFVSIQD-FDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQM 162 (222)
T ss_dssp CSCEEEEEEECC-CCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEE
T ss_pred CEEEEEEEEeCC-CceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEE
Confidence 999999999753 222222222100 0000 03444331
Q ss_pred ------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCCCCCCCC
Q psy12422 294 ------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAANLGKSPS 342 (356)
Q Consensus 294 ------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~ 342 (356)
...|.|.+++.+|+|.|+|.|.|..|.....+.|.|.++|-....++..
T Consensus 163 ~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~ 217 (222)
T 4i0k_A 163 ANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFPPETGH 217 (222)
T ss_dssp ECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC-----------
T ss_pred cCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccccCCccCc
Confidence 1248899999999999999999999999999999999998766555443
No 333
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=4.1e-16 Score=109.44 Aligned_cols=92 Identities=26% Similarity=0.489 Sum_probs=78.3
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccC-CCceeEEEe-CCEEEEEEccCCCCCCeEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNS-SNILDLKYK-NGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~-~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+.. ..++.+... .+...|.|.+++.+|+|.|+|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 5678888888888999999999999999999999999999998875 344444443 45568999999999999999999
Q ss_pred EcCCCceEEEEEEe
Q psy12422 265 TNSLGTAETKCKLT 278 (356)
Q Consensus 265 ~n~~g~~~~~~~l~ 278 (356)
.|..|.....+.|.
T Consensus 86 ~N~~g~~~~~~~l~ 99 (110)
T 2dm2_A 86 ANPQGRISCTGRLM 99 (110)
T ss_dssp ECTTCCEEECCCEE
T ss_pred EECCCeEEEEEEEE
Confidence 99999988777666
No 334
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.67 E-value=7.8e-16 Score=126.26 Aligned_cols=246 Identities=14% Similarity=0.127 Sum_probs=83.2
Q ss_pred CCceEEEEEeccCCCCe-eEEeeCCEEcccCCeeE-EecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPT-VKWYKGNRELSKRDYSM-SYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~-v~W~k~g~~l~~~~~~~-~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|+|.+. .+.|. +.|.- ++... .. ....+...|.|.+++.+ |.|.|.+....-..+..+.|.|..+
T Consensus 14 G~sv~l~Cs~~-c~~p~~~~~~t---~l~~~--~~~~~g~~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~~v~l~V~~~ 85 (291)
T 1mq8_A 14 GGSVLVTCSTS-CDQPKLLGIET---PLPKK--ELLLPGNNRKVYELSNVQED--SQPMCYSNCPDGQSTAKTFLTVYWT 85 (291)
T ss_dssp TCEEEEEEEEC-CSSCSEEEEEC---SSCCC--CCCCSCSSEEEEEEESCCSC--CCCEEEEECSSCEEEEECEEEECBC
T ss_pred CCeEEEEEeCC-CCCCccceEEe---cCCCc--ccccCCCceEEEEEEecccC--CeEEEEEEcCCccEEEEEEEEEecC
Confidence 89999999996 44554 88853 11111 01 11112235788887743 4699999765445566778888877
Q ss_pred ccchhhhhhcccccccCccceeeeccc---CCc--eeeecccccccCCccccCCCCceEEEEeeccccccccccccCCCc
Q psy12422 79 EESKEQQELAHNFLYSGDRKYIEKHIR---PAP--AIITTRQEIKSSYSSHTDDTGRTTTQMSTLSSNYSSSTNNATSPS 153 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~c~~~---p~p--~i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (356)
|..+.... ....+.+|+.++|.|.+. |.+ .|.|++++..+....... ...... + ........
T Consensus 86 P~~v~I~~-~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~---~~~~~~------l---~~~~~~~D 152 (291)
T 1mq8_A 86 PERVELAP-LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG---EPAEVT------T---TVLVRRDH 152 (291)
T ss_dssp CSCCCBCC-CCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCB---TTEEEE------E---ECCCSSSC
T ss_pred CCCCEEec-CCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCC---CCceEE------E---Eeeeeecc
Confidence 55543332 234588999999999987 433 489999886654322110 000000 0 01111222
Q ss_pred cceeeeeeccccCCC-C---CcccccceeeecCCCCCCCCCee-cccCCceeecCCCeEEEEEEEcCCCCC---eEEEEE
Q psy12422 154 KKITRRMNSILDTDS-P---SRSRSTTKELIMPPDTAMTPPQF-ANKLTDKTIDDGQCLDLSAVVKGDPEP---RVSWTK 225 (356)
Q Consensus 154 ~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~v~~g~~~~l~C~~~g~p~p---~i~W~~ 225 (356)
+...+.|.+-..... . ....+....+.+ +.+|.. ........+.+|+.++|.|.++|+|++ .+.|++
T Consensus 153 ~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V-----~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~ 227 (291)
T 1mq8_A 153 HGANFSCRTELDLRPQGLELFENTSAPYQLQT-----FVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLAL 227 (291)
T ss_dssp SSCEEEEEEEEECGGGTSCEEEECCCCEECBC------------------------------------------------
T ss_pred CCceEEEEEEecCCccCCccccccccceEEEE-----EecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEE
Confidence 223333333222111 0 011223333333 222211 110112268899999999999998665 599999
Q ss_pred CCEEccCCCceeEEEeCCEEEEEEccC---CCCC--CeEEEEEEEcCCCceEEEEEEe
Q psy12422 226 NGQPLNSSNILDLKYKNGVASLQIQEV---FPED--EGVYVCTATNSLGTAETKCKLT 278 (356)
Q Consensus 226 ~g~~~~~~~~~~~~~~~~~~~L~i~~v---~~~d--~G~Y~C~a~n~~g~~~~~~~l~ 278 (356)
+|..+.... ..+++ .+.+... ++++ .+.|+|.|.|.....+....+.
T Consensus 228 ~g~~l~~~~----~~~g~--~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~ 279 (291)
T 1mq8_A 228 GDQRLNPTV----TYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVT 279 (291)
T ss_dssp ----------------------------------------------------------
T ss_pred CCEecCcee----eecCC--eEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEE
Confidence 999887531 11222 2333322 3444 5677898887555455555554
No 335
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.67 E-value=2.1e-16 Score=109.21 Aligned_cols=79 Identities=15% Similarity=0.238 Sum_probs=65.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCee-EEe--cC---CeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYS-MSY--SD---GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVI 74 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~-~~~--~~---~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 74 (356)
|+.+.|.|.+.|.|.|.++|+|||+++..+.+. ... .+ ....|.|.+++.+|+|.|+|.|.|..|.+..++.|.
T Consensus 16 ~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~ 95 (103)
T 1wwb_X 16 DHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAH 95 (103)
T ss_dssp CCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred CcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEE
Confidence 457889999999999999999999999866432 211 11 123599999999999999999999999999999999
Q ss_pred Eeccc
Q psy12422 75 VESEE 79 (356)
Q Consensus 75 v~~~~ 79 (356)
|.+.+
T Consensus 96 V~~~P 100 (103)
T 1wwb_X 96 FMGWP 100 (103)
T ss_dssp CSCCC
T ss_pred ECCCC
Confidence 87653
No 336
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.67 E-value=1.1e-15 Score=120.62 Aligned_cols=128 Identities=17% Similarity=0.270 Sum_probs=88.8
Q ss_pred CCceeecCCCeEEEEEEEcCCCCCeEEEEEC--CEEc------------cCCCceeEEEeCCEEEEEEccCCCCCCeEEE
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDPEPRVSWTKN--GQPL------------NSSNILDLKYKNGVASLQIQEVFPEDEGVYV 261 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~--g~~~------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 261 (356)
+....+.+|+++.|.|.+.+.|.+.+.|+++ |..+ ....++.....++...|.|.+++.+|+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 5667899999999999999999899999984 2221 1123455455566779999999999999999
Q ss_pred EEEEcCCCceEE---EEEEec-CCCCcc----------------------------ceeEEeCC----------------
Q psy12422 262 CTATNSLGTAET---KCKLTP-LNSSNI----------------------------LDLKYKNG---------------- 293 (356)
Q Consensus 262 C~a~n~~g~~~~---~~~l~p-~~~~~~----------------------------~~~~~~~~---------------- 293 (356)
|.|.|..+.... .+.+.. ..+|.+ ..+.|.++
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 166 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQD 166 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCcc
Confidence 999998764321 222220 000100 02344321
Q ss_pred --------eEEEEEecCCCCCCeEEEEEEEcCCcceEE
Q psy12422 294 --------VASLQIQEVFPEDEGVYVCTATNSLGTAET 323 (356)
Q Consensus 294 --------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 323 (356)
.+.|.|..+..+|+|.|+|.|.|.......
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (210)
T 1lk3_L 167 SKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPV 204 (210)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCE
T ss_pred CCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCee
Confidence 126899999999999999999998765433
No 337
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.66 E-value=1.6e-15 Score=118.87 Aligned_cols=128 Identities=9% Similarity=0.091 Sum_probs=84.3
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee-EEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD-LKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
..+|.+...+. ..+.+|++++|.|.+.+ |.+.+.|+|+|..+....... .........|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 6 HRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp -CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 55677776665 67899999999999974 778999999987654211100 0111224689999999999999999998
Q ss_pred cCCC-------ceEEEEEEec-CCCCcc------------------------ceeEEeC------------------CeE
Q psy12422 266 NSLG-------TAETKCKLTP-LNSSNI------------------------LDLKYKN------------------GVA 295 (356)
Q Consensus 266 n~~g-------~~~~~~~l~p-~~~~~~------------------------~~~~~~~------------------~~~ 295 (356)
|... +....+.+.. ...|.+ ..+.|.+ ...
T Consensus 84 ~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~ 163 (201)
T 1nkr_A 84 VTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGTFQA 163 (201)
T ss_dssp BTTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESSCCSEEEEEETTCSSCEEEECEEEETTEEEE
T ss_pred cCCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCCCCceEEEEECCcccCcccccccccCCceEE
Confidence 7531 1222333321 011111 0333422 156
Q ss_pred EEEEecCCCCCCeEEEEEEEcCC
Q psy12422 296 SLQIQEVFPEDEGVYVCTATNSL 318 (356)
Q Consensus 296 ~L~i~~v~~~d~G~Y~C~a~n~~ 318 (356)
.|.|.+|+ |+|.|+|.|++..
T Consensus 164 ~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 164 DFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEEECC--SCEEEEEEEEETT
T ss_pred EEEeCCcC--CCeeEEEEEEcCC
Confidence 89999998 9999999999763
No 338
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=3.3e-16 Score=107.93 Aligned_cols=92 Identities=26% Similarity=0.383 Sum_probs=75.6
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+............ .+|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n 83 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQ--GTLQIKNLRISDTGTYTCVATS 83 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTT--CCEEEESCCTTTCCEEEEEEEC
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCC--CEEEEccCCcccCEEEEEEEEc
Confidence 56788888888889999999999999999999999999999888743222222222 3799999999999999999999
Q ss_pred CCCceEEEEEEecC
Q psy12422 267 SLGTAETKCKLTPL 280 (356)
Q Consensus 267 ~~g~~~~~~~l~p~ 280 (356)
..|.....+.|...
T Consensus 84 ~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 84 SSGETSWSAVLDVT 97 (100)
T ss_dssp SSCCCBCCEEEEEE
T ss_pred CCCCEEEEEEEEEe
Confidence 99988877777643
No 339
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.66 E-value=1.6e-15 Score=104.81 Aligned_cols=83 Identities=24% Similarity=0.339 Sum_probs=68.6
Q ss_pred cCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeE--EEeC---CEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 202 DDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDL--KYKN---GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 202 ~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~--~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
..|..+.|.|.+.|+|.|.+.|+++|..+........ ...+ ..+.|.|.+++.+|+|.|+|.|.|..|....++.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 4578899999999999999999999999987654322 2111 1356999999999999999999999999999999
Q ss_pred EecCCCCc
Q psy12422 277 LTPLNSSN 284 (356)
Q Consensus 277 l~p~~~~~ 284 (356)
|.....|.
T Consensus 94 l~V~~~P~ 101 (103)
T 1wwb_X 94 AHFMGWPG 101 (103)
T ss_dssp ECCSCCCC
T ss_pred EEECCCCC
Confidence 98766554
No 340
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.66 E-value=9.1e-16 Score=105.49 Aligned_cols=77 Identities=23% Similarity=0.459 Sum_probs=68.4
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.+.|+|+|..+... ++.+...++..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 21 G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 21 DSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIKA 98 (99)
T ss_dssp SSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEEEe
Confidence 789999999999999999999999999754 45566666777999999999999999999999999999999888863
No 341
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.66 E-value=4.2e-16 Score=113.26 Aligned_cols=84 Identities=24% Similarity=0.407 Sum_probs=71.7
Q ss_pred CCceeecCCCeEEEEEEEcCCCCCeEEEEECC----------------------------EEc-cCCCceeEEEeCCEEE
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNG----------------------------QPL-NSSNILDLKYKNGVAS 246 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g----------------------------~~~-~~~~~~~~~~~~~~~~ 246 (356)
+.++.+.+|+++.|.|.+.|+|.|.|.|+|+| ..+ ....++.+...+..+.
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 46789999999999999999999999999988 444 2344555566666789
Q ss_pred EEEccCCCCCCeEEEEEEEcCCCceEEEEEEec
Q psy12422 247 LQIQEVFPEDEGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 247 L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
|.|.+++.+|+|.|+|.|.|..|....++.|.+
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 999999999999999999999999998888764
No 342
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.66 E-value=9.4e-16 Score=108.51 Aligned_cols=80 Identities=25% Similarity=0.317 Sum_probs=68.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEccc--CCeeEEe-cCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSK--RDYSMSY-SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~--~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.|.|+|+|..+.. .++.+.. .++..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 30 G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 109 (116)
T 2kkq_A 30 GDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTA 109 (116)
T ss_dssp TEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEEeC
Confidence 78999999999999999999999999874 3444433 33566899999999999999999999999999999999987
Q ss_pred ccc
Q psy12422 78 EEE 80 (356)
Q Consensus 78 ~~~ 80 (356)
.+.
T Consensus 110 ~p~ 112 (116)
T 2kkq_A 110 RPN 112 (116)
T ss_dssp CSC
T ss_pred CCC
Confidence 643
No 343
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.66 E-value=1.7e-15 Score=123.37 Aligned_cols=79 Identities=18% Similarity=0.242 Sum_probs=58.5
Q ss_pred eecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECC--EEc-------------cCCCceeEE--EeCCEEEEEEccCC
Q psy12422 191 QFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNG--QPL-------------NSSNILDLK--YKNGVASLQIQEVF 253 (356)
Q Consensus 191 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g--~~~-------------~~~~~~~~~--~~~~~~~L~i~~v~ 253 (356)
.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|.. ... ....++... ......+|.|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 3444556788999999999999999999999999822 111 011223322 23456789999999
Q ss_pred CCCCeEEEEEEEcCCC
Q psy12422 254 PEDEGVYVCTATNSLG 269 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~g 269 (356)
.+|+|.|.|.|.|..+
T Consensus 85 ~~DsG~Y~C~~~~~~~ 100 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGT 100 (256)
T ss_dssp GGGCSEEEEEEECTTC
T ss_pred cccCEEEEEEEecCCC
Confidence 9999999999999764
No 344
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.66 E-value=7.4e-16 Score=107.59 Aligned_cols=78 Identities=26% Similarity=0.367 Sum_probs=67.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.|.+.|+|+|..+... ++.+...++...|.|.+++.+|+|.|+|.|.|..|.....+.|.|.++
T Consensus 28 G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 28 GAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp TSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred CCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEEEcC
Confidence 789999999999999999999999998754 344445566678999999999999999999999999999999988764
No 345
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=3.5e-16 Score=109.82 Aligned_cols=81 Identities=21% Similarity=0.395 Sum_probs=69.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEccc--CCeeEEe-cCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSK--RDYSMSY-SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~--~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.|.|||+|..+.. .++.+.. .++...|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 23 G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 102 (110)
T 2dm2_A 23 GMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQA 102 (110)
T ss_dssp TCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCEEEEC
T ss_pred CCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEEC
Confidence 78999999999999999999999999874 2344433 35667899999999999999999999999999999999987
Q ss_pred cccc
Q psy12422 78 EEES 81 (356)
Q Consensus 78 ~~~~ 81 (356)
.+..
T Consensus 103 ~~~~ 106 (110)
T 2dm2_A 103 VNSG 106 (110)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 6543
No 346
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.66 E-value=4e-16 Score=123.27 Aligned_cols=127 Identities=20% Similarity=0.281 Sum_probs=88.3
Q ss_pred ceeecCCCeEEEEEEEcCCCCCeEEEEEC--CEEcc------------CCCceeEEEeCCEEEEEEccCCCCCCeEEEEE
Q psy12422 198 DKTIDDGQCLDLSAVVKGDPEPRVSWTKN--GQPLN------------SSNILDLKYKNGVASLQIQEVFPEDEGVYVCT 263 (356)
Q Consensus 198 ~~~v~~g~~~~l~C~~~g~p~p~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 263 (356)
.+.+.+|++++|.|.+. |.+.+.|+++ +..+. ...++......+..+|.|.+++.+|+|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 67899999999999998 8889999993 22221 22345555566778999999999999999999
Q ss_pred EEcCCCc--eEEEEEEecC----CCCcc----------------------------ceeEEeCC----------------
Q psy12422 264 ATNSLGT--AETKCKLTPL----NSSNI----------------------------LDLKYKNG---------------- 293 (356)
Q Consensus 264 a~n~~g~--~~~~~~l~p~----~~~~~----------------------------~~~~~~~~---------------- 293 (356)
|.|..+. ......|... ..|.+ ..+.|.++
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 166 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQ 166 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEC
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceEC
Confidence 9998772 2222222211 11111 13444321
Q ss_pred -------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy12422 294 -------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 326 (356)
Q Consensus 294 -------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 326 (356)
.+.|.|..+..+|+|.|+|.|.|..+..+..+.
T Consensus 167 ~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 167 SNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp TTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEEC
T ss_pred CCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeecc
Confidence 146888888888999999999999877666553
No 347
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.65 E-value=2.8e-16 Score=105.41 Aligned_cols=70 Identities=20% Similarity=0.362 Sum_probs=58.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v 75 (356)
|+++.|.|.+.+ |.|.++|||||++|..+ ++.+...++..+|.|.+++.+|+|.|+|.|.|. +.++.|+|
T Consensus 21 g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~ltV 91 (91)
T 2lvc_A 21 SECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE----CAYFTVTI 91 (91)
T ss_dssp TCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC----EEEEEEEC
T ss_pred CCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce----EEEEEEEC
Confidence 789999999965 88999999999999765 466667777789999999999999999999554 45555543
No 348
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=5.1e-16 Score=106.51 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=64.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+ .|.|.++|||||.++..+ ++.+...+...+|.|.+++.+|+|.|+|.|.|. ..+.++.|.|.++|
T Consensus 22 G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 22 GKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTLPAKVHVISGP 97 (100)
T ss_dssp TSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCEEEEEEEECCS
T ss_pred CCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeEEEEEEEeCCC
Confidence 7899999999 889999999999999764 455666666779999999999999999999998 55677888887654
No 349
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.65 E-value=9.8e-16 Score=124.23 Aligned_cols=135 Identities=14% Similarity=0.215 Sum_probs=87.8
Q ss_pred CCceeecCCCeEEEEEEEcCCCCCe-----EEEEECCEEccCCCce-------eEE-----------EeCCEEEEEEccC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDPEPR-----VSWTKNGQPLNSSNIL-------DLK-----------YKNGVASLQIQEV 252 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p~p~-----i~W~~~g~~~~~~~~~-------~~~-----------~~~~~~~L~i~~v 252 (356)
+..+.+.+|+++.|.|.+.|.|++. +.|++++......... ... ...+..+|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 4556789999999999999888776 9999953222100000 000 0112345999999
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEecCCCCcc---------------------------ceeEEeCC------------
Q psy12422 253 FPEDEGVYVCTATNSLGTAETKCKLTPLNSSNI---------------------------LDLKYKNG------------ 293 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~~g~~~~~~~l~p~~~~~~---------------------------~~~~~~~~------------ 293 (356)
+.+|+|.|+|.+.|..+.....+.|.+...|.+ ..+.|..+
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~ 169 (248)
T 3pv7_A 90 QLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISE 169 (248)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECT
T ss_pred CHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEEEEEECCccCCCcccccc
Confidence 999999999999998887666555542111111 03333321
Q ss_pred -----------------eEEEEEecCCCCCCeEEEEEEEcCCcc--eEEEEEEEEE
Q psy12422 294 -----------------VASLQIQEVFPEDEGVYVCTATNSLGT--AETKCKLTVR 330 (356)
Q Consensus 294 -----------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~--~~~~~~l~V~ 330 (356)
.+.|.|..+..+|+|.|+|.|.|..+. ....+.|.|.
T Consensus 170 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 170 DVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225 (248)
T ss_dssp TEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC---
T ss_pred ceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEc
Confidence 246888888999999999999999886 4557777773
No 350
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=1.2e-15 Score=105.80 Aligned_cols=92 Identities=18% Similarity=0.239 Sum_probs=76.5
Q ss_pred CCCeecccCCc---eeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEE
Q psy12422 188 TPPQFANKLTD---KTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 188 ~~p~~~~~~~~---~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
.+|.+...+.. ..+.+|+.+.|.|.+.+.|.+ +.|+++|..+....++.+..++....|.|.+++.+|+|.|+|.|
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 84 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT 84 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEEC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEE
Confidence 45666555555 789999999999999999998 99999999998887777777788889999999999999999999
Q ss_pred EcCCCceEEEEEEecC
Q psy12422 265 TNSLGTAETKCKLTPL 280 (356)
Q Consensus 265 ~n~~g~~~~~~~l~p~ 280 (356)
.|..+.....+...|.
T Consensus 85 ~n~~~~~~l~V~~~P~ 100 (104)
T 2e6p_A 85 EGVSAFFGVTVQDPSG 100 (104)
T ss_dssp SSCCCCEEEEEECCCC
T ss_pred CCceEEEEEEEcCCCC
Confidence 9987755555544443
No 351
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=1.9e-15 Score=123.19 Aligned_cols=73 Identities=22% Similarity=0.367 Sum_probs=55.2
Q ss_pred CceeecCCCeEEEEEEEcCCC--CCeEEEEEC--CEEcc----------------CCCceeEEEe--CCEEEEEEccCCC
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDP--EPRVSWTKN--GQPLN----------------SSNILDLKYK--NGVASLQIQEVFP 254 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~--g~~~~----------------~~~~~~~~~~--~~~~~L~i~~v~~ 254 (356)
....+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...++....+ .+..+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 345789999999999999886 688999985 22110 1234444432 4567999999999
Q ss_pred CCCeEEEEEEEcCCC
Q psy12422 255 EDEGVYVCTATNSLG 269 (356)
Q Consensus 255 ~d~G~Y~C~a~n~~g 269 (356)
+|+|.|.|.|.|..|
T Consensus 88 ~DsG~Y~C~a~n~~g 102 (257)
T 1f3r_B 88 DDTGTYYCTRDLYGG 102 (257)
T ss_dssp TCCEEEEEEEESSSS
T ss_pred ccCEEEEEEEccccc
Confidence 999999999999864
No 352
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.65 E-value=9.9e-16 Score=119.11 Aligned_cols=128 Identities=16% Similarity=0.195 Sum_probs=88.6
Q ss_pred CCceeecCCCeEEEEEEEcC-CCCCeEEEEECCEEcc---CC---------------CceeEEEeCCEEEEEEccCCCCC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKG-DPEPRVSWTKNGQPLN---SS---------------NILDLKYKNGVASLQIQEVFPED 256 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g-~p~p~i~W~~~g~~~~---~~---------------~~~~~~~~~~~~~L~i~~v~~~d 256 (356)
+..+.+.+|++++|.|.+.+ .+.+.|.|+++|..+. .. .++.+ . ...+|.|.+++.+|
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~--~-~~~sL~I~~v~~~D 81 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNF--T-QSYSLQLSNLKMED 81 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEE--C-TTCCEEECSCCGGG
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEE--C-CCeEEEECCCCccc
Confidence 45678899999999999975 4557899999986542 10 01111 1 23579999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEecCC---------------CC--cc------------ceeEEeCC------eEEEEEec
Q psy12422 257 EGVYVCTATNSLGTAETKCKLTPLN---------------SS--NI------------LDLKYKNG------VASLQIQE 301 (356)
Q Consensus 257 ~G~Y~C~a~n~~g~~~~~~~l~p~~---------------~~--~~------------~~~~~~~~------~~~L~i~~ 301 (356)
+|.|.|.|.|..+.....+.|.+.. .. .+ ..+.|.++ ...|+|..
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~~l~i~~ 161 (193)
T 2if7_A 82 TGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSW 161 (193)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSSEEEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCCeEEEEe
Confidence 9999999999988655554444110 00 01 14566543 24577865
Q ss_pred CCCC-CCeEEEEEEEcCCcceEEEEE
Q psy12422 302 VFPE-DEGVYVCTATNSLGTAETKCK 326 (356)
Q Consensus 302 v~~~-d~G~Y~C~a~n~~g~~~~~~~ 326 (356)
...+ |+|.|+|.|+|.+|..+..+.
T Consensus 162 ~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 162 DPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp CTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred ccCcCCCCcEEEEEECCCCccccccc
Confidence 5554 899999999999998866544
No 353
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.65 E-value=6.2e-16 Score=123.46 Aligned_cols=88 Identities=19% Similarity=0.299 Sum_probs=55.8
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcC-CC-CCeEEEEECCEEccCCCce--eEEEeCC----EEEEEEccCCCCCCeEE
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKG-DP-EPRVSWTKNGQPLNSSNIL--DLKYKNG----VASLQIQEVFPEDEGVY 260 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p-~p~i~W~~~g~~~~~~~~~--~~~~~~~----~~~L~i~~v~~~d~G~Y 260 (356)
+|.+...+....+.+|..++|.|.+.+ +| ++.+.| ++..+...... .....++ .+.|.|.....+| |.|
T Consensus 129 ~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~y 205 (226)
T 3mlr_H 129 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY 205 (226)
T ss_dssp CCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCC
T ss_pred CCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeE
Confidence 344443222334568999999999976 45 456999 44333211100 0011111 2479999999999 999
Q ss_pred EEEEEcCCCceEEEEEEec
Q psy12422 261 VCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 261 ~C~a~n~~g~~~~~~~l~p 279 (356)
+|.|.|..+.......+.|
T Consensus 206 tC~v~h~~~~~~~~~~~~~ 224 (226)
T 3mlr_H 206 ICNVNHKPSNTKVDKKVEP 224 (226)
T ss_dssp EEEEEEGGGTEEEEEECCC
T ss_pred EEEEEECCCCcCeEEEccC
Confidence 9999999988777776654
No 354
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.65 E-value=1.4e-15 Score=119.56 Aligned_cols=63 Identities=24% Similarity=0.365 Sum_probs=47.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCC--E---Ec--------ccCCeeEEec---CCeEEEEEeeCCCCCCeEEEEEEEeCC
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGN--R---EL--------SKRDYSMSYS---DGVVSMEIIDCKPEDSGEYKCVATNKH 64 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g--~---~l--------~~~~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 64 (356)
|++|+|.|.+.+.+ +.+.|||+. . .+ ...++..... .+.++|+|.+++.+|+|.|.|.+.+..
T Consensus 16 G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 94 (207)
T 1ypz_E 16 GTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTWH 94 (207)
T ss_dssp TCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECBC
T ss_pred CCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 78999999997654 489999942 2 11 1234444433 566799999999999999999998763
No 355
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.65 E-value=6.7e-16 Score=122.61 Aligned_cols=133 Identities=16% Similarity=0.318 Sum_probs=88.9
Q ss_pred ecccCCceeecCCCeEEEEEEEcCC-CCCeEEEEECC--EE-------------cc---CCCceeEEEeCCEEEEEEccC
Q psy12422 192 FANKLTDKTIDDGQCLDLSAVVKGD-PEPRVSWTKNG--QP-------------LN---SSNILDLKYKNGVASLQIQEV 252 (356)
Q Consensus 192 ~~~~~~~~~v~~g~~~~l~C~~~g~-p~p~i~W~~~g--~~-------------~~---~~~~~~~~~~~~~~~L~i~~v 252 (356)
+...+ .+.+.+|+++.|.|.+.+. |.+.+.|+|.. .. .. ...++......+..+|.|.++
T Consensus 4 v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (218)
T 3s96_B 4 LTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNI 82 (218)
T ss_dssp EECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSC
T ss_pred EEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccC
Confidence 44444 6789999999999999988 89999999821 10 00 012444444566778999999
Q ss_pred CCCCCeEEEEEEEcCCCc-----e--EEEEEEe--cCCCCcc----------------------------ceeEEeCCe-
Q psy12422 253 FPEDEGVYVCTATNSLGT-----A--ETKCKLT--PLNSSNI----------------------------LDLKYKNGV- 294 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~~g~-----~--~~~~~l~--p~~~~~~----------------------------~~~~~~~~~- 294 (356)
+.+|+|.|.|.|.|..|. . ...+.+. +...|.+ ..+.|.+++
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~ 162 (218)
T 3s96_B 83 QPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGT 162 (218)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred CcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCE
Confidence 999999999999998761 1 1122222 1011111 034443311
Q ss_pred ---------------------EEEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy12422 295 ---------------------ASLQIQEVFPEDEGVYVCTATNSLGTAETKC 325 (356)
Q Consensus 295 ---------------------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 325 (356)
+.|.|..+..+|+|.|+|.|.|..+..+..+
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 163 PITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp EC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred ECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 2377888888899999999999987666544
No 356
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.65 E-value=3.7e-16 Score=109.36 Aligned_cols=93 Identities=29% Similarity=0.529 Sum_probs=69.7
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.......... ....|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n 85 (108)
T 3kvq_A 8 RVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD--GNRNLTIRRVRKEDEGLYTCQACS 85 (108)
T ss_dssp ---CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEET--TTTEEEECSCCGGGCEEEEEEEC-
T ss_pred cCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeC--CCcEEEEeecCcccCEEEEEEEEe
Confidence 567888888888899999999999999999999999999998887666554433 334899999999999999999999
Q ss_pred CCCceEEEEEEecCC
Q psy12422 267 SLGTAETKCKLTPLN 281 (356)
Q Consensus 267 ~~g~~~~~~~l~p~~ 281 (356)
..|.....+.|....
T Consensus 86 ~~g~~~~~~~l~V~~ 100 (108)
T 3kvq_A 86 VLGCAKVEAFFIIEG 100 (108)
T ss_dssp ---CEEEEEEEEEEC
T ss_pred CCCceEEEEEEEEeC
Confidence 999999888887443
No 357
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=4.5e-16 Score=107.00 Aligned_cols=89 Identities=38% Similarity=0.707 Sum_probs=76.2
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+..... ....+...|.|.+++.+|+|.|+|.|.|
T Consensus 9 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~---~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 85 (99)
T 2yr3_A 9 EVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARS---TCEAGVAELHIQDALPEDHGTYTCLAEN 85 (99)
T ss_dssp CEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCC---EEETTEEEEEECSCCTTCCBCEEEEEEC
T ss_pred ccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccce---EeeCCeEEEEECCCChhhCEEEEEEEEE
Confidence 5678888888888999999999999999999999999999988865432 3345567999999999999999999999
Q ss_pred CCCceEEEEEEe
Q psy12422 267 SLGTAETKCKLT 278 (356)
Q Consensus 267 ~~g~~~~~~~l~ 278 (356)
..|....++.|.
T Consensus 86 ~~g~~~~~~~l~ 97 (99)
T 2yr3_A 86 ALGQVSCSAWVT 97 (99)
T ss_dssp SSCEEEEECCEE
T ss_pred CCCeEEEEEEEE
Confidence 999887776654
No 358
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.65 E-value=1.5e-15 Score=104.57 Aligned_cols=77 Identities=21% Similarity=0.420 Sum_probs=67.6
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEccc---CCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSK---RDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~---~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.+.|+|+|..+.. .++.+...++..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 20 G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 20 GKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp TSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 78999999999999999999999999863 355566666667999999999999999999999999998888888863
No 359
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.64 E-value=4.6e-16 Score=126.95 Aligned_cols=78 Identities=21% Similarity=0.316 Sum_probs=48.9
Q ss_pred eecCCCeEEEEEEEcCC-CC-CeEEEEECCEEccCCCce--eEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 200 TIDDGQCLDLSAVVKGD-PE-PRVSWTKNGQPLNSSNIL--DLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g~-p~-p~i~W~~~g~~~~~~~~~--~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
.+.+|+.++|.|.+.+. |. +.+.| ++..+...... .....++ .+.|.|.....+| |.|+|.|.|..+..
T Consensus 138 ~~~~g~~~~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~ 214 (263)
T 3iu4_H 138 KGSTSGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 214 (263)
T ss_dssp CC----EEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTE
T ss_pred ccccCCcEEEEEEEEeEeCCceEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCc
Confidence 34579999999999764 43 67999 44333211100 0011111 2478899988889 99999999999887
Q ss_pred EEEEEEecC
Q psy12422 272 ETKCKLTPL 280 (356)
Q Consensus 272 ~~~~~l~p~ 280 (356)
.....+.+.
T Consensus 215 ~~~~~~~~~ 223 (263)
T 3iu4_H 215 KVDKKVEPA 223 (263)
T ss_dssp EEEEECCCC
T ss_pred ceeEEEcCC
Confidence 777777644
No 360
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.64 E-value=1.1e-15 Score=104.13 Aligned_cols=87 Identities=20% Similarity=0.455 Sum_probs=74.8
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+....+.+|+.+.|.|.+.|.| |.+.|+++|..+....++.+. + ..|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~--~--~~L~i~~~~~~D~G~Y~C~a~n 81 (95)
T 2ckn_A 7 AQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT--G--EEVEVRDSIPADSGLYACVTSS 81 (95)
T ss_dssp SCSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC--S--SEEEESSCCGGGSEEEEEEEEE
T ss_pred CCCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe--C--CEEEECCCChHHCEEEEEEecc
Confidence 5667888788889999999999999999998 799999999988766654432 3 3899999999999999999999
Q ss_pred CCCceEEEEEEe
Q psy12422 267 SLGTAETKCKLT 278 (356)
Q Consensus 267 ~~g~~~~~~~l~ 278 (356)
..|.....+.|.
T Consensus 82 ~~g~~~~~~~l~ 93 (95)
T 2ckn_A 82 PSGSDTTYFSVN 93 (95)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCcEEEEEEEE
Confidence 999988877764
No 361
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.64 E-value=2e-15 Score=128.59 Aligned_cols=175 Identities=13% Similarity=0.125 Sum_probs=94.3
Q ss_pred cccccCccceeeecccC----CceeeecccccccCC--ccc-----------cCCCCceEEEEeeccccccccccccCCC
Q psy12422 90 NFLYSGDRKYIEKHIRP----APAIITTRQEIKSSY--SSH-----------TDDTGRTTTQMSTLSSNYSSSTNNATSP 152 (356)
Q Consensus 90 ~~~~~g~~~~l~c~~~p----~p~i~w~~~~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (356)
..+.+|+.+.|.|.+.. .+.+.|+++...... ... .....+.... ........-+.......
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~-~~~~~~~~~L~I~~v~~ 88 (344)
T 1za6_B 10 EVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLT-ADTSASTAYVELSSLRS 88 (344)
T ss_dssp EEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEE-EETTTTEEEEEECSCCG
T ss_pred eEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEE-EecCCCEEEEEECCCCc
Confidence 45789999999999872 467999987421110 000 0001111111 11111111122333444
Q ss_pred ccceeeeeeccccCCCCCcccccceeeecCCCCCCCCCeecccCCceeecCCCeEEEEEEEcCC-CC-CeEEEEECCEEc
Q psy12422 153 SKKITRRMNSILDTDSPSRSRSTTKELIMPPDTAMTPPQFANKLTDKTIDDGQCLDLSAVVKGD-PE-PRVSWTKNGQPL 230 (356)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~-p~i~W~~~g~~~ 230 (356)
.+.+.|.|...... ........+.+... ...+|.+...+....+.+|+.++|.|.+.|. |. +.|.|+++|..+
T Consensus 89 ~D~G~Y~C~~~n~~----~~~~~~~~l~V~~~-~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~ 163 (344)
T 1za6_B 89 EDTAVYFCTRSLNM----AYWGQGTLVTVSSA-STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTS 163 (344)
T ss_dssp GGCEEEEEEETTTT----CEECCCEEEEECSS-CCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCT
T ss_pred ccCEEEEEEEecCc----ceecCcEEEEEecC-CCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccC
Confidence 45555555443311 01112223333211 1244555443333456899999999999886 64 689999998764
Q ss_pred cCCCceeEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 231 NSSNILDLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 231 ~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
...........++ .+.|.|.+++.+| |.|+|.|.|..+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~ 207 (344)
T 1za6_B 164 GVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 207 (344)
T ss_dssp TEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTE
T ss_pred ceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 2110000000111 2479999999888 99999999998864
No 362
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.64 E-value=3.9e-15 Score=121.21 Aligned_cols=78 Identities=21% Similarity=0.325 Sum_probs=50.5
Q ss_pred eecCCCeEEEEEEEcC-CC-CCeEEEEECCEEccCCCce--eEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCce
Q psy12422 200 TIDDGQCLDLSAVVKG-DP-EPRVSWTKNGQPLNSSNIL--DLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTA 271 (356)
Q Consensus 200 ~v~~g~~~~l~C~~~g-~p-~p~i~W~~~g~~~~~~~~~--~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 271 (356)
.+.+|+.++|.|.+.+ +| ++.+.| ++..+...... .....++ .+.|.|.....+| |.|+|.|.|..+..
T Consensus 165 ~~~~g~~v~L~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~ 241 (256)
T 3sob_H 165 KSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 241 (256)
T ss_dssp ----TTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTE
T ss_pred ccccCCcEEEEEEEEEEECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCc
Confidence 4568999999999976 55 346999 55443321100 0011111 2479999999999 99999999999887
Q ss_pred EEEEEEecC
Q psy12422 272 ETKCKLTPL 280 (356)
Q Consensus 272 ~~~~~l~p~ 280 (356)
.....+.+.
T Consensus 242 ~~~~~~~~~ 250 (256)
T 3sob_H 242 KVDKKVEPK 250 (256)
T ss_dssp EEEEECCCC
T ss_pred ceEEEeccc
Confidence 777766543
No 363
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.64 E-value=4.9e-15 Score=122.06 Aligned_cols=81 Identities=16% Similarity=0.205 Sum_probs=62.9
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCE-----Ecc---------CCCceeEEEeCCEEEEEEccCCC
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQ-----PLN---------SSNILDLKYKNGVASLQIQEVFP 254 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~-----~~~---------~~~~~~~~~~~~~~~L~i~~v~~ 254 (356)
.+.+...+..+.+.+|++++|.|.+.+.|.+.+.|++++. .+. ...++.....++..+|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 3445566677889999999999999999999999998531 111 12345555556677999999999
Q ss_pred CCCeEEEEEEEcCCC
Q psy12422 255 EDEGVYVCTATNSLG 269 (356)
Q Consensus 255 ~d~G~Y~C~a~n~~g 269 (356)
+|+|.|.|.|.|..+
T Consensus 92 ~DsG~Y~C~~~n~~~ 106 (276)
T 3auv_A 92 EDFATYYCQQHYTTP 106 (276)
T ss_dssp GGCEEEEEEECSSSS
T ss_pred hhCEEEEEEEecCCc
Confidence 999999999999744
No 364
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.64 E-value=1e-16 Score=125.76 Aligned_cols=119 Identities=14% Similarity=0.265 Sum_probs=81.9
Q ss_pred ecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEEEe--
Q psy12422 201 IDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT-- 278 (356)
Q Consensus 201 v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~-- 278 (356)
+.+|++++|.|.+ |.+.|.|+|+|..+... .....+|.|.+++.+|+|.|+|.+.+.... ...+.+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~-~~~v~v~~~ 83 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNKSK-PLQVYYRMG 83 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSCCC-CEEEEEEC-
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCCCe-eEEEEEEEe
Confidence 4689999999998 88999999999887532 112347999999999999999997654321 1111111
Q ss_pred ------------------------------c----CCCCcc----------------ceeEEeC----------------
Q psy12422 279 ------------------------------P----LNSSNI----------------LDLKYKN---------------- 292 (356)
Q Consensus 279 ------------------------------p----~~~~~~----------------~~~~~~~---------------- 292 (356)
+ ..+... ..+.|.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~g~p~p~i~W~k~~~~l~~~~~~~~~~~ 163 (204)
T 1sy6_A 84 SADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDKNIGS 163 (204)
T ss_dssp -----------------------------------CCCCEEEEETTEEEEECSCCCSSCEEEEETTEEESCCTTCTTEEE
T ss_pred ccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcCCCCCCceEEEECCEECCCccCCceEec
Confidence 0 000000 0233322
Q ss_pred CeEEEEEecC-CCCCCeEEEEEEEcCCcce-EEEEEEEEE
Q psy12422 293 GVASLQIQEV-FPEDEGVYVCTATNSLGTA-ETKCKLTVR 330 (356)
Q Consensus 293 ~~~~L~i~~v-~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~ 330 (356)
.+..|.|.++ +.+|+|.|+|.|.|..|.. +..+.|+|+
T Consensus 164 ~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 164 DEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp ETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred CCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 2357999999 9999999999999999973 556666654
No 365
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.64 E-value=9.5e-16 Score=116.56 Aligned_cols=130 Identities=15% Similarity=0.142 Sum_probs=87.1
Q ss_pred ceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC--Cce--------eEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 198 DKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS--NIL--------DLKYKNGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 198 ~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~--~~~--------~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
.+.+.+|++++|.|.+.+ |.+.|.|++++..+..- ... .........+|.|.+++.+|+|.|.|.|.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 457889999999999854 88899999988654210 000 1122223358999999999999999999999
Q ss_pred CCceEEEEEEe-cCCCCcc------------------ceeEEeCCeEEE------EEecCCCCCCeEEEEEEEcCCcceE
Q psy12422 268 LGTAETKCKLT-PLNSSNI------------------LDLKYKNGVASL------QIQEVFPEDEGVYVCTATNSLGTAE 322 (356)
Q Consensus 268 ~g~~~~~~~l~-p~~~~~~------------------~~~~~~~~~~~L------~i~~v~~~d~G~Y~C~a~n~~g~~~ 322 (356)
.|.....+.+. |...|.+ ..+.|..++..| .|......|.|.|+|.|+|.+|..+
T Consensus 83 ~~~~~~~L~V~~~~~~p~i~~~~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~~l~~~~~~~~g~Y~C~a~N~~~~~~ 162 (171)
T 1ccz_A 83 TDTMKFFLYVLEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNRVSQES 162 (171)
T ss_dssp CSCEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEECcCCCCEEEEecCCcEEEEEeCCCCCcEEEEEECCEECcCCcceEEEEeccCCCceEEEEEEcccCccc
Confidence 88544444443 2211221 156665433221 2222236789999999999999988
Q ss_pred EEEEEE
Q psy12422 323 TKCKLT 328 (356)
Q Consensus 323 ~~~~l~ 328 (356)
..+.|.
T Consensus 163 ~~~~l~ 168 (171)
T 1ccz_A 163 EMEVVN 168 (171)
T ss_dssp EEECCC
T ss_pred ceeEEe
Confidence 776653
No 366
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.64 E-value=1.9e-15 Score=119.57 Aligned_cols=79 Identities=11% Similarity=0.126 Sum_probs=62.2
Q ss_pred eecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECC--EEcc------------CCCceeEEEeCCEEEEEEccCCCCC
Q psy12422 191 QFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNG--QPLN------------SSNILDLKYKNGVASLQIQEVFPED 256 (356)
Q Consensus 191 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g--~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d 256 (356)
.+...+..+.+.+|+++.|.|.+.+.|.+.+.|+|++ ..+. ...++.....++..+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3nl4_L 3 VMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECAD 82 (213)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred cEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHH
Confidence 3445566788999999999999999999999999842 1110 1245555556677899999999999
Q ss_pred CeEEEEEEEcCCC
Q psy12422 257 EGVYVCTATNSLG 269 (356)
Q Consensus 257 ~G~Y~C~a~n~~g 269 (356)
+|.|.|.|.|..+
T Consensus 83 ~G~Y~C~~~~~~~ 95 (213)
T 3nl4_L 83 AATYYCQSTYENP 95 (213)
T ss_dssp CEEEEEEECCSST
T ss_pred CEEEEEecCCCCc
Confidence 9999999999766
No 367
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.3e-15 Score=108.28 Aligned_cols=90 Identities=27% Similarity=0.446 Sum_probs=76.1
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC-CceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS-NILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
..+|.+...+....+.+|+++.|.|.+.|+|.|.+.|+++|..+... .++.. ...+ +|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~-~~~~--~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQ-LENG--VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEE-EETT--EEEEESCCGGGCCCEEEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEE-ccCC--EEEEccCCcCCCEEEEEEEE
Confidence 56788888888899999999999999999999999999999888653 33333 3344 89999999999999999999
Q ss_pred cCCCceEEEEEEec
Q psy12422 266 NSLGTAETKCKLTP 279 (356)
Q Consensus 266 n~~g~~~~~~~l~p 279 (356)
|..|.....+.|..
T Consensus 83 n~~g~~~~~~~l~V 96 (118)
T 2eo9_A 83 TPSGEATWSAYIEV 96 (118)
T ss_dssp CSSCEEEEECCEEE
T ss_pred cCCCcEEEEEEEEE
Confidence 99999887777663
No 368
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.63 E-value=5.6e-15 Score=116.72 Aligned_cols=129 Identities=17% Similarity=0.245 Sum_probs=88.0
Q ss_pred CCceeecCCCeEEEEEEEcCCC---CCeEEEEECC--EEc------------cCCCceeEEEeCCEEEEEEccCCCCCCe
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDP---EPRVSWTKNG--QPL------------NSSNILDLKYKNGVASLQIQEVFPEDEG 258 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p---~p~i~W~~~g--~~~------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G 258 (356)
+..+.+.+|+++.|.|.+.+.| .+.+.|++++ ..+ ....++......+...|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 5667899999999999999888 4789999852 222 1123444455566779999999999999
Q ss_pred EEEEEEEcCCCceE---EEEEEe--cCCCCcc----------------------------ceeEEeCC------------
Q psy12422 259 VYVCTATNSLGTAE---TKCKLT--PLNSSNI----------------------------LDLKYKNG------------ 293 (356)
Q Consensus 259 ~Y~C~a~n~~g~~~---~~~~l~--p~~~~~~----------------------------~~~~~~~~------------ 293 (356)
.|.|.|.|..+... ..+.+. +..+|.+ ..+.|.++
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~ 166 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQ 166 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECC
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCC
Confidence 99999999875321 122221 0011110 03444321
Q ss_pred -----------eEEEEEecCCCCCCeEEEEEEEcCCcceEEE
Q psy12422 294 -----------VASLQIQEVFPEDEGVYVCTATNSLGTAETK 324 (356)
Q Consensus 294 -----------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 324 (356)
.+.|.|..+..+|+|.|+|.|.|.....+..
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 167 PSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred ceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 1358899999999999999999987654443
No 369
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=9.2e-15 Score=118.39 Aligned_cols=71 Identities=21% Similarity=0.395 Sum_probs=54.3
Q ss_pred CceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EEc-----------------cCCCceeEEEe--CCEEEEEEccCC
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QPL-----------------NSSNILDLKYK--NGVASLQIQEVF 253 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~~-----------------~~~~~~~~~~~--~~~~~L~i~~v~ 253 (356)
....+.+|++++|.|.+.+.| .+.+.|+|+. ..+ ....++.+..+ .+..+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 446899999999999999987 5789999832 111 11234444443 456789999999
Q ss_pred CCCCeEEEEEEEcC
Q psy12422 254 PEDEGVYVCTATNS 267 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~ 267 (356)
.+|+|.|.|.|.|.
T Consensus 90 ~~D~G~Y~C~~~n~ 103 (247)
T 2ghw_B 90 AEDTAVYYCARDRS 103 (247)
T ss_dssp GGGCEEEEEEEEET
T ss_pred HHHCEEEEEeeecc
Confidence 99999999999998
No 370
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.63 E-value=3.2e-15 Score=114.53 Aligned_cols=127 Identities=17% Similarity=0.262 Sum_probs=87.2
Q ss_pred CceeecCCCeEEEEEEEc--CCCCCeEEEEE--CCEEc----------cCCCceeEEEeCCEEEEEEccCCCCCCeEEEE
Q psy12422 197 TDKTIDDGQCLDLSAVVK--GDPEPRVSWTK--NGQPL----------NSSNILDLKYKNGVASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~--g~p~p~i~W~~--~g~~~----------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 262 (356)
..+...+|++++|.|... +.|.+.|.|++ ++..+ ....++.+. .++ +|.|.+++.+|+|.|+|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~-~ng--sL~I~~v~~~DsG~Y~c 83 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF-KNG--TLKIKHLKTDDQDIYKV 83 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC-TTS--CEEECSCCGGGCEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC-CCC--CEEECCCChhhCEEEEE
Confidence 345788999999999542 34567899999 88776 223333332 233 89999999999999999
Q ss_pred EEEcCCCceEE--EEEEe---cCCCCcc------------------ceeEEeCCeEE-------EEEecCCCCCCeEEEE
Q psy12422 263 TATNSLGTAET--KCKLT---PLNSSNI------------------LDLKYKNGVAS-------LQIQEVFPEDEGVYVC 312 (356)
Q Consensus 263 ~a~n~~g~~~~--~~~l~---p~~~~~~------------------~~~~~~~~~~~-------L~i~~v~~~d~G~Y~C 312 (356)
.|.|..|.... .+.|. +...|.+ ..+.|..++.. |.+ ....+|+|.|+|
T Consensus 84 ~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l~~~~~~i~~-~~~~~d~G~Y~C 162 (182)
T 1hnf_A 84 SIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHLKLSQRVITH-KWTTSLSAKFKC 162 (182)
T ss_dssp EEEETTSCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEESSCEEEEESSCEEE-ECCSCEEEEEEE
T ss_pred EEEeCCCceeEEEEEEEEEcCcCCCCEEEEccCcEEEEeEccCCCCCEEEEEECCEECCCCCcEEEE-ecccCCCcEEEE
Confidence 99999887543 33333 2112221 15666554332 333 335789999999
Q ss_pred EEEcCCcceEEEEEE
Q psy12422 313 TATNSLGTAETKCKL 327 (356)
Q Consensus 313 ~a~n~~g~~~~~~~l 327 (356)
.|+|.+|...+...+
T Consensus 163 ~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 163 TAGNKVSKESSVEPV 177 (182)
T ss_dssp EEECSSCEEEEEEEE
T ss_pred EEEeCCCCcEEccee
Confidence 999999988876655
No 371
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.63 E-value=2.1e-15 Score=101.82 Aligned_cols=72 Identities=15% Similarity=0.139 Sum_probs=59.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|++++|.|.+.+ |++.|+|||||.++..+ ++.+...++..+|.|.+++.+|+|.|+|.|.|. ..++.|.|.+
T Consensus 20 G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~----~~sa~L~V~~ 92 (93)
T 1waa_A 20 GETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT----KSAANLKVKE 92 (93)
T ss_dssp TSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE----EEEEEEEEEC
T ss_pred CCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC----cEEEEEEEEc
Confidence 789999999976 55889999999999754 555666666779999999999999999999774 4566777753
No 372
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=6.6e-16 Score=106.89 Aligned_cols=88 Identities=18% Similarity=0.292 Sum_probs=74.2
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCC-CeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPE-PRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
..++.|...+.+..+.+|++++|.|.+.+.|. +.+.|+|||..+....++.+..++...+|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 6 SGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp CCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEET
T ss_pred cCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEEC
Confidence 45567777788899999999999999998885 47999999999988888888878888899999999999999999986
Q ss_pred cCCCceEEEEEEe
Q psy12422 266 NSLGTAETKCKLT 278 (356)
Q Consensus 266 n~~g~~~~~~~l~ 278 (356)
|. ..++.|.
T Consensus 86 ~~----~~~a~L~ 94 (104)
T 2eny_A 86 GL----TSKASLI 94 (104)
T ss_dssp TE----EEEECEE
T ss_pred Ce----eEEEEEE
Confidence 53 4444444
No 373
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=3.8e-16 Score=109.64 Aligned_cols=82 Identities=22% Similarity=0.338 Sum_probs=69.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC-e-eEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD-Y-SMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-~-~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.|.|.|+|+|..+.... . .....++..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...
T Consensus 24 G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 103 (110)
T 2dm3_A 24 GKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAK 103 (110)
T ss_dssp SSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEEECC
T ss_pred CCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEEeCC
Confidence 7899999999999999999999999887543 2 2334555679999999999999999999999999999999999876
Q ss_pred ccch
Q psy12422 79 EESK 82 (356)
Q Consensus 79 ~~~~ 82 (356)
+..+
T Consensus 104 p~~P 107 (110)
T 2dm3_A 104 ESGP 107 (110)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 5543
No 374
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.63 E-value=4.4e-15 Score=120.73 Aligned_cols=144 Identities=17% Similarity=0.218 Sum_probs=91.1
Q ss_pred ccCCceeecCCCeEEEEEEEcCCC--CCeEEEEE--CCEEcc-----------------CCCceeEEEe--CCEEEEEEc
Q psy12422 194 NKLTDKTIDDGQCLDLSAVVKGDP--EPRVSWTK--NGQPLN-----------------SSNILDLKYK--NGVASLQIQ 250 (356)
Q Consensus 194 ~~~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~--~g~~~~-----------------~~~~~~~~~~--~~~~~L~i~ 250 (356)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+| .+..+. ...++....+ .+..+|.|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 85 (253)
T 3uzq_A 6 EQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLS 85 (253)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeC
Confidence 344567899999999999998865 67899998 221110 1133444333 335679999
Q ss_pred cCCCCCCeEEEEEEEcCCCceE---EEEEEec-----------------------C-----------------CCCcc--
Q psy12422 251 EVFPEDEGVYVCTATNSLGTAE---TKCKLTP-----------------------L-----------------NSSNI-- 285 (356)
Q Consensus 251 ~v~~~d~G~Y~C~a~n~~g~~~---~~~~l~p-----------------------~-----------------~~~~~-- 285 (356)
+++.+|+|.|.|.|.|..+... ..+.+.. . ..+..
T Consensus 86 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~ 165 (253)
T 3uzq_A 86 SLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYG 165 (253)
T ss_dssp SCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETT
T ss_pred CCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCC
Confidence 9999999999999999554321 1111110 0 00000
Q ss_pred -ceeEEeC-------------------------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEE-EEEEEEEec
Q psy12422 286 -LDLKYKN-------------------------------GVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLTVRST 332 (356)
Q Consensus 286 -~~~~~~~-------------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~ 332 (356)
..+.|.+ ....|+|.+++.+|+|.|.|.|.|..+..-. .+.|.|...
T Consensus 166 ~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~ 245 (253)
T 3uzq_A 166 NSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRP 245 (253)
T ss_dssp EECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred CcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCC
Confidence 0223321 2346999999999999999999997654433 667888888
Q ss_pred CCCCC
Q psy12422 333 PAANL 337 (356)
Q Consensus 333 p~~~~ 337 (356)
+.++.
T Consensus 246 ~~~~~ 250 (253)
T 3uzq_A 246 LEHHH 250 (253)
T ss_dssp -----
T ss_pred CCCcc
Confidence 77654
No 375
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.63 E-value=1.9e-15 Score=105.20 Aligned_cols=91 Identities=20% Similarity=0.263 Sum_probs=78.4
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.|...+.++.+.+|+.+.|.|.+.+.|.+ +.|+++|..+....++.+..++....|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (106)
T 2dlt_A 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDG 84 (106)
T ss_dssp CCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEET
T ss_pred CCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEcc
Confidence 567888888889999999999999999998888 9999999999888888777778788999999999999999999999
Q ss_pred CCCceEEEEEEe
Q psy12422 267 SLGTAETKCKLT 278 (356)
Q Consensus 267 ~~g~~~~~~~l~ 278 (356)
......+.+.+.
T Consensus 85 ~~~~~~~~l~V~ 96 (106)
T 2dlt_A 85 YALSLSAKLNFL 96 (106)
T ss_dssp SCCCCCBCEEEE
T ss_pred CCceEEEEEEEE
Confidence 855444444443
No 376
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=6.2e-16 Score=110.01 Aligned_cols=78 Identities=22% Similarity=0.347 Sum_probs=66.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.|.|.+.|.|||+|..+... .+.....++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+.+
T Consensus 23 G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 23 DGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG--VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFG 100 (118)
T ss_dssp TCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT--EEEEESCCGGGCCCEEEEEECSSCEEEEECCEEEECCS
T ss_pred CCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC--EEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEEEeCC
Confidence 789999999999999999999999988642 222333444 79999999999999999999999999999999998764
Q ss_pred c
Q psy12422 80 E 80 (356)
Q Consensus 80 ~ 80 (356)
.
T Consensus 101 ~ 101 (118)
T 2eo9_A 101 V 101 (118)
T ss_dssp C
T ss_pred C
Confidence 3
No 377
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.62 E-value=5.4e-15 Score=116.89 Aligned_cols=79 Identities=14% Similarity=0.194 Sum_probs=61.0
Q ss_pred eecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECC--EEc------------cCCCceeEEEeCCEEEEEEccCCCCC
Q psy12422 191 QFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNG--QPL------------NSSNILDLKYKNGVASLQIQEVFPED 256 (356)
Q Consensus 191 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g--~~~------------~~~~~~~~~~~~~~~~L~i~~v~~~d 256 (356)
.+...+..+.+.+|+++.|.|.+.+.|.+.+.|+|.+ ... ....++......+..+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCccc
Confidence 3444566788999999999999999999999999832 111 01334555555667899999999999
Q ss_pred CeEEEEEEEcCCC
Q psy12422 257 EGVYVCTATNSLG 269 (356)
Q Consensus 257 ~G~Y~C~a~n~~g 269 (356)
+|.|.|.|.|..+
T Consensus 83 ~G~Y~C~~~~~~~ 95 (213)
T 3r06_A 83 IGSYYCQQYYNYP 95 (213)
T ss_dssp CSEEEEEECSSSS
T ss_pred CEEEEEecccCCc
Confidence 9999999998754
No 378
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.62 E-value=5.2e-15 Score=102.40 Aligned_cols=78 Identities=21% Similarity=0.291 Sum_probs=68.4
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC--ceeEEEeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN--ILDLKYKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
.|+.|...+.++.+.+|+++.|.|.+.+ |.+.+.|+|+|..+.... ++.+..++....|.|.+++.+|+|.|+|.|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 84 (103)
T 1x44_A 6 SGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTT 84 (103)
T ss_dssp SSCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEET
T ss_pred CCceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEEC
Confidence 3455777778889999999999999987 779999999999998777 5577777777899999999999999999998
Q ss_pred c
Q psy12422 266 N 266 (356)
Q Consensus 266 n 266 (356)
|
T Consensus 85 n 85 (103)
T 1x44_A 85 G 85 (103)
T ss_dssp T
T ss_pred C
Confidence 8
No 379
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=8.5e-16 Score=105.60 Aligned_cols=74 Identities=26% Similarity=0.437 Sum_probs=63.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
|+++.|.|.+.|.|.|.+.|+|+|..+..... ....+...|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 26 G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 26 GQDFVLQCSVRGTPVPRITWLLNGQPIQYARS--TCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTVH 99 (99)
T ss_dssp TCCEEEECEEEEESCCCCEEEESSSBCSSCCC--EEETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEEEC
T ss_pred CCeEEEEEEEeeeCCCeEEEEECCEECcccce--EeeCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEC
Confidence 78999999999999999999999998875542 234455689999999999999999999999998888887763
No 380
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.62 E-value=5e-16 Score=108.02 Aligned_cols=76 Identities=21% Similarity=0.348 Sum_probs=67.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
|+++.|.|.+.|.|.|.|.|+|+|..+... ++.+...+...+|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 29 G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 29 GESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp SSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEEC
T ss_pred CCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 789999999999999999999999988654 4555555566799999999999999999999999999888888875
No 381
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=8.8e-16 Score=105.74 Aligned_cols=76 Identities=22% Similarity=0.397 Sum_probs=64.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.|.+.|+|+|..+... .+.....++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|.++
T Consensus 23 G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 23 DGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQG--TLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTES 99 (100)
T ss_dssp SSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTC--CEEEESCCTTTCCEEEEEEECSSCCCBCCEEEEEESC
T ss_pred CCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCC--EEEEccCCcccCEEEEEEEEcCCCCEEEEEEEEEecC
Confidence 789999999999999999999999988732 222333444 7999999999999999999999999988999998764
No 382
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.61 E-value=1.1e-14 Score=118.49 Aligned_cols=138 Identities=22% Similarity=0.318 Sum_probs=89.6
Q ss_pred CCceeecCCCeEEEEEEEcCCC--CCeEEEEEC--CEEcc-----------------CCCceeEEEe--CCEEEEEEccC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDP--EPRVSWTKN--GQPLN-----------------SSNILDLKYK--NGVASLQIQEV 252 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~--g~~~~-----------------~~~~~~~~~~--~~~~~L~i~~v 252 (356)
+....+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...++....+ .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 3456899999999999999886 678999993 22210 1234444432 45678999999
Q ss_pred CCCCCeEEEEEEEcCCCc---e----EEEEEEe--------c-----------------C--CCC-----ccceeEE---
Q psy12422 253 FPEDEGVYVCTATNSLGT---A----ETKCKLT--------P-----------------L--NSS-----NILDLKY--- 290 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~~g~---~----~~~~~l~--------p-----------------~--~~~-----~~~~~~~--- 290 (356)
+.+|+|.|.|.|.|..|. . ...+.+. | . ..+ .+.+++.
T Consensus 87 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g 166 (256)
T 1nqb_A 87 TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPG 166 (256)
T ss_dssp CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTT
T ss_pred ChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCC
Confidence 999999999999998652 1 1111111 0 0 111 2222221
Q ss_pred -------------------------eCCeEEEEEecCCCCCCeEEEEEEEcCCcce-EEEEEEEEEecC
Q psy12422 291 -------------------------KNGVASLQIQEVFPEDEGVYVCTATNSLGTA-ETKCKLTVRSTP 333 (356)
Q Consensus 291 -------------------------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p 333 (356)
......|+|.+++.+|+|.|+|.|.|..+.. ...+.|.|..++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~~ 235 (256)
T 1nqb_A 167 QSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRAA 235 (256)
T ss_dssp SCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC--
T ss_pred CCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECCC
Confidence 0123479999999999999999999864432 225567777554
No 383
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.61 E-value=5.8e-16 Score=122.42 Aligned_cols=128 Identities=16% Similarity=0.251 Sum_probs=87.5
Q ss_pred CCceeecCCCeEEEEEEEcCCCCCeEEEEEC--CEEcc------------CCCceeEEEeCCEEEEEEccCCCCCCeEEE
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDPEPRVSWTKN--GQPLN------------SSNILDLKYKNGVASLQIQEVFPEDEGVYV 261 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 261 (356)
+..+.+.+|+++.|.|.+.+.|.+.+.|+++ |..+. ...++......+...|.|.+++.+|+|.|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 4567899999999999999988889999984 33221 124455555666789999999999999999
Q ss_pred EEEEcCCCc-----eEEEEEEe--cCCCCcc----------------------------ceeEEeCC-------------
Q psy12422 262 CTATNSLGT-----AETKCKLT--PLNSSNI----------------------------LDLKYKNG------------- 293 (356)
Q Consensus 262 C~a~n~~g~-----~~~~~~l~--p~~~~~~----------------------------~~~~~~~~------------- 293 (356)
|.|.|..+. ....+.+. +..+|.+ ..+.|.++
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 165 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKP 165 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCc
Confidence 999973221 11222221 1111110 13444331
Q ss_pred ---------eEEEEEecCCCCCCeEEEEEEEcCCcceEE
Q psy12422 294 ---------VASLQIQEVFPEDEGVYVCTATNSLGTAET 323 (356)
Q Consensus 294 ---------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 323 (356)
.+.|.|.++..+|+|.|+|.|.|..+..+.
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (212)
T 1nfd_E 166 SKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVEK 204 (212)
T ss_dssp BCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCCC
T ss_pred eecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEEE
Confidence 134889999999999999999999876443
No 384
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=3.5e-15 Score=103.30 Aligned_cols=79 Identities=22% Similarity=0.387 Sum_probs=71.7
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..||.+...+.+..+.+|+++.|.|.+.+ |.+.+.|+++|..+....++.+..++....|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 56778888888899999999999999997 88899999999999888888777777788999999999999999999999
No 385
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.61 E-value=4.9e-15 Score=110.57 Aligned_cols=80 Identities=21% Similarity=0.407 Sum_probs=68.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC-eeEEe-cCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD-YSMSY-SDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.|.|.|||+|..+.... +.+.. .++...|+|.+++.+|+|.|+|.|.|..|.....+.|.|...
T Consensus 56 G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 135 (154)
T 1fhg_A 56 GSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETM 135 (154)
T ss_dssp TSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEEeCc
Confidence 7899999999999999999999999997653 33332 355679999999999999999999999999999999999876
Q ss_pred cc
Q psy12422 79 EE 80 (356)
Q Consensus 79 ~~ 80 (356)
+.
T Consensus 136 p~ 137 (154)
T 1fhg_A 136 GK 137 (154)
T ss_dssp --
T ss_pred Cc
Confidence 43
No 386
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.61 E-value=7.8e-15 Score=118.11 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=53.5
Q ss_pred ccCCceeecCCCeEEEEEEEcCCCCCeEEEEEC--CEEc---------------cCCCceeEEE-eCCEEEEEEccCCCC
Q psy12422 194 NKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKN--GQPL---------------NSSNILDLKY-KNGVASLQIQEVFPE 255 (356)
Q Consensus 194 ~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~--g~~~---------------~~~~~~~~~~-~~~~~~L~i~~v~~~ 255 (356)
..+..+.+.+|++++|.|. .+.|.+.+.|+|+ +..+ ....++.... .....+|.|.+++.+
T Consensus 5 q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 83 (238)
T 2p1y_A 5 QSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPS 83 (238)
T ss_dssp EECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGG
T ss_pred ECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcc
Confidence 3456778999999999999 7889999999994 2111 0122333332 223458999999999
Q ss_pred CCeEEEEEEEcCCC
Q psy12422 256 DEGVYVCTATNSLG 269 (356)
Q Consensus 256 d~G~Y~C~a~n~~g 269 (356)
|+|.|.|.|.|..|
T Consensus 84 DsG~Y~C~~~~~~g 97 (238)
T 2p1y_A 84 QTSVYFCASGDLGQ 97 (238)
T ss_dssp GCEEEEEEEEC---
T ss_pred cCeeEEEEEEeCCC
Confidence 99999999999865
No 387
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=2.6e-15 Score=106.11 Aligned_cols=102 Identities=18% Similarity=0.323 Sum_probs=79.6
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
.++.+...+.+..+.+|+++.|.|.+.|.|.|.+.|+++|..+....++.+..
T Consensus 12 ~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~--------------------------- 64 (115)
T 2cr6_A 12 RRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDA--------------------------- 64 (115)
T ss_dssp SCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCC---------------------------
T ss_pred CCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEE---------------------------
Confidence 34577777888999999999999999999999999999998775443221100
Q ss_pred CCceEEEEEEecCCCCccceeEEeCCeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCCCCCCCC
Q psy12422 268 LGTAETKCKLTPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAANLGKSPS 342 (356)
Q Consensus 268 ~g~~~~~~~l~p~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~ 342 (356)
.......|.|.+++.+|+|.|+|.+ |.....+.|.|..+|.+...+.|+
T Consensus 65 ----------------------~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~~~L~V~~~p~~~~~~~~~ 113 (115)
T 2cr6_A 65 ----------------------QPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEKPSVFSRSGPS 113 (115)
T ss_dssp ----------------------BTTTBCCBEECSCCTTTCEEEEEEE----TTEECCEEEEEECCSSCCSSSCSS
T ss_pred ----------------------cCCCEEEEEEcCCChhhCEEEEEEE----CCeeEEEEEEEECCCceeccCCCC
Confidence 0113457899999999999999984 777888999999999888777665
No 388
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.61 E-value=6.7e-16 Score=123.74 Aligned_cols=82 Identities=21% Similarity=0.305 Sum_probs=58.9
Q ss_pred CCceeecCCCeEEEEEEEcCCCC-CeEEEEECCEEcc---------CCCcee--EE----------EeCCEEEEEEccCC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDPE-PRVSWTKNGQPLN---------SSNILD--LK----------YKNGVASLQIQEVF 253 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p~-p~i~W~~~g~~~~---------~~~~~~--~~----------~~~~~~~L~i~~v~ 253 (356)
+..+.+.+|+++.|.|.+.+.|. +.+.|++++.... ....+. .. ... ...|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~L~i~~v~ 85 (231)
T 2pet_A 7 PPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDS-QGRLVLAEAQ 85 (231)
T ss_dssp CSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECT-TCCEEESSCC
T ss_pred CCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCC-CceEEEcccC
Confidence 45678999999999999999985 8899998543311 011011 11 111 1249999999
Q ss_pred CCCCeEEEEEEEcCC-CceEEEEEEe
Q psy12422 254 PEDEGVYVCTATNSL-GTAETKCKLT 278 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~-g~~~~~~~l~ 278 (356)
.+|+|.|+|.|.|.. +.....+.|.
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~ 111 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLN 111 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEE
T ss_pred cccCceEEEEEEecCCCceEEEEEEE
Confidence 999999999999987 6666665555
No 389
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.61 E-value=9.5e-15 Score=118.98 Aligned_cols=140 Identities=21% Similarity=0.278 Sum_probs=87.3
Q ss_pred CceeecCCCeEEEEEEEcCCC--CCeEEEEEC--CEEcc-----------------CCCceeEEEe--CCEEEEEEccCC
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDP--EPRVSWTKN--GQPLN-----------------SSNILDLKYK--NGVASLQIQEVF 253 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~--g~~~~-----------------~~~~~~~~~~--~~~~~L~i~~v~ 253 (356)
....+.+|++++|.|.+.+.| .+.+.|++. +..+. ...++....+ ....+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 10 GLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 345689999999999999877 678999982 21110 1123333332 345679999999
Q ss_pred CCCCeEEEEEEEcCC----CceEEEEEEecCC----------------CCccc--------------------------e
Q psy12422 254 PEDEGVYVCTATNSL----GTAETKCKLTPLN----------------SSNIL--------------------------D 287 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~----g~~~~~~~l~p~~----------------~~~~~--------------------------~ 287 (356)
.+|+|.|.|.|.|.. +.......|.+.. .+.+. .
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 169 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSN 169 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTC
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcE
Confidence 999999999999872 1111111111110 11100 2
Q ss_pred eEEeC-------------------------------CeEEEEEecCCCCCCeEEEEEEEcCCcceEE-EEEEEEEecCCC
Q psy12422 288 LKYKN-------------------------------GVASLQIQEVFPEDEGVYVCTATNSLGTAET-KCKLTVRSTPAA 335 (356)
Q Consensus 288 ~~~~~-------------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~~ 335 (356)
+.|.+ ....|+|.+++.+|+|.|.|.|.|..+..-. .+.|.|+.+++.
T Consensus 170 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~~~ 249 (256)
T 3umt_A 170 LNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAAAL 249 (256)
T ss_dssp EEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC-----
T ss_pred EEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCCcc
Confidence 33321 2335999999999999999999997554433 678999988765
Q ss_pred C
Q psy12422 336 N 336 (356)
Q Consensus 336 ~ 336 (356)
.
T Consensus 250 ~ 250 (256)
T 3umt_A 250 E 250 (256)
T ss_dssp -
T ss_pred c
Confidence 4
No 390
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.61 E-value=1.6e-14 Score=99.36 Aligned_cols=91 Identities=25% Similarity=0.340 Sum_probs=76.8
Q ss_pred CCCeecccCCc-eeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 188 TPPQFANKLTD-KTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 188 ~~p~~~~~~~~-~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
.+|.|...+.+ ..+.+|+++.|.|.+. .|.|.+.|+++|..+....++.+..++....|.|.+++.+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 46777766655 6889999999999998 7999999999999998888888877787889999999999999999999
Q ss_pred CCCceEEEEEEecCCCC
Q psy12422 267 SLGTAETKCKLTPLNSS 283 (356)
Q Consensus 267 ~~g~~~~~~~l~p~~~~ 283 (356)
|....++.|.+..+|
T Consensus 83 --g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 --GDEKCSTELFVRSGP 97 (100)
T ss_dssp --TTEEEEEEEEECCSC
T ss_pred --CCceEEEEEEEecCC
Confidence 667777777655443
No 391
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.60 E-value=3.3e-14 Score=100.13 Aligned_cols=88 Identities=25% Similarity=0.413 Sum_probs=75.2
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
.||.+...+.+..+.+|+++.|.|.+.+. |.+.|+|++..+....++.+..++....|.|.+++.+|+|.|+|.|
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 92 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC--- 92 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE---
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe---
Confidence 45678777888899999999999999775 7899999999998888888887887889999999999999999999
Q ss_pred CCceEEEEEEecCC
Q psy12422 268 LGTAETKCKLTPLN 281 (356)
Q Consensus 268 ~g~~~~~~~l~p~~ 281 (356)
+.....+.|....
T Consensus 93 -~~~~~~~~l~V~~ 105 (113)
T 2edh_A 93 -GKERTSAMLTVRA 105 (113)
T ss_dssp -TTEEEEEEEEECC
T ss_pred -CCCCEEEEEEEeC
Confidence 6666666666443
No 392
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.60 E-value=2.9e-14 Score=108.05 Aligned_cols=68 Identities=15% Similarity=0.157 Sum_probs=49.1
Q ss_pred eeecCCCeEEEEEEEcC-CCCC--eEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 199 KTIDDGQCLDLSAVVKG-DPEP--RVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 199 ~~v~~g~~~~l~C~~~g-~p~p--~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
..+.+|+.++|.|.+.| .|.+ .|+|+|++..+.... ........+|++...+.+|.+.|+|+|.|..+
T Consensus 96 ~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~---~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 96 SWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREP---AVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp SEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEE---CCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred ccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEccccc---CCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 35789999999999977 5554 489999999886422 00112234678776666666699999999887
No 393
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.60 E-value=1.5e-14 Score=116.28 Aligned_cols=137 Identities=15% Similarity=0.224 Sum_probs=92.7
Q ss_pred CeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECC--EEc------------cCCCceeEEEeCCEEEEEEccCCCC
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNG--QPL------------NSSNILDLKYKNGVASLQIQEVFPE 255 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g--~~~------------~~~~~~~~~~~~~~~~L~i~~v~~~ 255 (356)
+.+...+....+.+|+++.|.|.+.+.|.+.+.|+|++ ... ....++......+..+|.|.+++.+
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 104 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 104 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChh
Confidence 44555567788999999999999999999999999832 111 1134555555667789999999999
Q ss_pred CCeEEEEEEEcCCCce---EEEEEEe-cCC----------------------------CCccceeEEeCC----------
Q psy12422 256 DEGVYVCTATNSLGTA---ETKCKLT-PLN----------------------------SSNILDLKYKNG---------- 293 (356)
Q Consensus 256 d~G~Y~C~a~n~~g~~---~~~~~l~-p~~----------------------------~~~~~~~~~~~~---------- 293 (356)
|+|.|.|.|.|..+.. ...+.+. +.. .|....+.|.++
T Consensus 105 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~ 184 (237)
T 3sob_L 105 DFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQE 184 (237)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEE
T ss_pred hCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceee
Confidence 9999999998876421 1122221 000 010113344321
Q ss_pred --------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy12422 294 --------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 326 (356)
Q Consensus 294 --------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 326 (356)
.+.|.|..+..+|+|.|+|+|.|..........
T Consensus 185 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 231 (237)
T 3sob_L 185 SVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKS 231 (237)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEE
T ss_pred cccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeee
Confidence 246889999999999999999998765444333
No 394
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.60 E-value=1e-14 Score=101.80 Aligned_cols=92 Identities=24% Similarity=0.259 Sum_probs=71.1
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCC---CeEEEEECCEEccC---CCceeEEE--e----CCEEEEEEccCCCC
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPE---PRVSWTKNGQPLNS---SNILDLKY--K----NGVASLQIQEVFPE 255 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~---p~i~W~~~g~~~~~---~~~~~~~~--~----~~~~~L~i~~v~~~ 255 (356)
..|.|...+..+.+.+|++++|.|.+.|.|. |.|.|+|++..... ...+.+.. . .....|.|.+++.+
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 4577777888889999999999999999998 99999998732211 12222221 1 12468999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEec
Q psy12422 256 DEGVYVCTATNSLGTAETKCKLTP 279 (356)
Q Consensus 256 d~G~Y~C~a~n~~g~~~~~~~l~p 279 (356)
|+|.|+|.|.|..|...+++.|.+
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V 106 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTV 106 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEE
Confidence 999999999999999998888763
No 395
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.60 E-value=1.4e-15 Score=106.33 Aligned_cols=79 Identities=27% Similarity=0.483 Sum_probs=57.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 80 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 80 (356)
|+++.|.|.+.|.|.|.+.|+|+|..+........ ..+...|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+.+.
T Consensus 25 G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 25 GESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVL-KDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp TCCEEEECBCC----CCEEEEESSSBCCCBTTEEE-ETTTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEEEEC---
T ss_pred CCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEE-eCCCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEEeCCCc
Confidence 78999999999999999999999998865432222 22334899999999999999999999999999999999987644
No 396
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.60 E-value=1.8e-14 Score=97.99 Aligned_cols=86 Identities=24% Similarity=0.405 Sum_probs=73.1
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
..+.|...+.+..+.+|+++.|.|.+ +.|.+.+.|+++|..+....++.+..++....|.|.+++.+|+|.|+|.|
T Consensus 7 ~~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 82 (95)
T 2k1m_A 7 PVSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA--- 82 (95)
T ss_dssp CCCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE---
T ss_pred CCCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE---
Confidence 34667777788899999999999999 78999999999999998877777777777889999999999999999999
Q ss_pred CCceEEEEEEe
Q psy12422 268 LGTAETKCKLT 278 (356)
Q Consensus 268 ~g~~~~~~~l~ 278 (356)
|....++.|.
T Consensus 83 -g~~~~~~~l~ 92 (95)
T 2k1m_A 83 -GSSKVKFDLK 92 (95)
T ss_dssp -TTEEEEEEEE
T ss_pred -CCceEEEEEE
Confidence 4555555553
No 397
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.60 E-value=1.6e-14 Score=116.63 Aligned_cols=78 Identities=18% Similarity=0.209 Sum_probs=60.3
Q ss_pred ecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECC--EE---cc---------CCCceeEEEeCCEEEEEEccCCCCCC
Q psy12422 192 FANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNG--QP---LN---------SSNILDLKYKNGVASLQIQEVFPEDE 257 (356)
Q Consensus 192 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g--~~---~~---------~~~~~~~~~~~~~~~L~i~~v~~~d~ 257 (356)
+...+..+.+.+|++++|.|.+.+.|.+.+.|+|+. .. +. ...++.....++..+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 344556778999999999999999999999999842 11 10 12344444456677999999999999
Q ss_pred eEEEEEEEcCCC
Q psy12422 258 GVYVCTATNSLG 269 (356)
Q Consensus 258 G~Y~C~a~n~~g 269 (356)
|.|.|.|.|..+
T Consensus 84 G~Y~C~~~n~~~ 95 (242)
T 2znx_A 84 GMYFCQQSNSXP 95 (242)
T ss_dssp EEEEEEECSSSS
T ss_pred EEEEEeEecCCc
Confidence 999999999754
No 398
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.60 E-value=4.4e-14 Score=114.60 Aligned_cols=80 Identities=18% Similarity=0.204 Sum_probs=61.8
Q ss_pred CeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCE-----E---------ccCCCceeEEEeCCEEEEEEccCCCC
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQ-----P---------LNSSNILDLKYKNGVASLQIQEVFPE 255 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~-----~---------~~~~~~~~~~~~~~~~~L~i~~v~~~ 255 (356)
..+...+..+.+.+|++++|.|.+.+.|.+.+.|+|+.. . .....++.........+|.|.+++.+
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 344455667789999999999999999999999998421 1 11123455555566779999999999
Q ss_pred CCeEEEEEEEcCCC
Q psy12422 256 DEGVYVCTATNSLG 269 (356)
Q Consensus 256 d~G~Y~C~a~n~~g 269 (356)
|+|.|.|.|.|..+
T Consensus 85 D~G~Y~C~~~n~~~ 98 (250)
T 3esu_F 85 DIGTYFCQQGNTLP 98 (250)
T ss_dssp GCEEEEEEECSSSS
T ss_pred hCEEEEEEEeeCCC
Confidence 99999999998754
No 399
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.59 E-value=2.5e-14 Score=116.57 Aligned_cols=75 Identities=21% Similarity=0.345 Sum_probs=54.2
Q ss_pred cccCCceeecCCCeEEEEEEEcCC--CCCeEEEEECC--E--E-c-------------cCCCceeEEEe--CCEEEEEEc
Q psy12422 193 ANKLTDKTIDDGQCLDLSAVVKGD--PEPRVSWTKNG--Q--P-L-------------NSSNILDLKYK--NGVASLQIQ 250 (356)
Q Consensus 193 ~~~~~~~~v~~g~~~~l~C~~~g~--p~p~i~W~~~g--~--~-~-------------~~~~~~~~~~~--~~~~~L~i~ 250 (356)
...+....+.+|++++|.|.+.+. |.+.+.|+|.. . . + ....++....+ .+..+|.|.
T Consensus 12 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 91 (257)
T 3gkz_A 12 LQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLK 91 (257)
T ss_dssp EEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred EECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEEC
Confidence 344456679999999999999884 47789999832 1 1 1 01123333322 345689999
Q ss_pred cCCCCCCeEEEEEEEcC
Q psy12422 251 EVFPEDEGVYVCTATNS 267 (356)
Q Consensus 251 ~v~~~d~G~Y~C~a~n~ 267 (356)
+++.+|+|.|.|.|.|.
T Consensus 92 ~v~~~DsG~Y~C~~~n~ 108 (257)
T 3gkz_A 92 SVSSEDTATYYCSYFDS 108 (257)
T ss_dssp SCCGGGCEEEEEEEECT
T ss_pred CCChhhCEEEEEEEecC
Confidence 99999999999999997
No 400
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.59 E-value=1.1e-14 Score=115.26 Aligned_cols=134 Identities=15% Similarity=0.235 Sum_probs=85.4
Q ss_pred CCceeecCCCeEEEEEEEcCC-------CCCeEEEEECCEEcc-----------------CCCceeEEE--eCCEEEEEE
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGD-------PEPRVSWTKNGQPLN-----------------SSNILDLKY--KNGVASLQI 249 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~-------p~p~i~W~~~g~~~~-----------------~~~~~~~~~--~~~~~~L~i 249 (356)
+..+.+.+|+++.|.|.+.+. +.+.+.|+|++.... ...++.+.. ..+..+|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 456789999999999999754 567899999765310 012222211 123457999
Q ss_pred ccCCCCCCeEEEEEEEcCCCce------EEEEEEe-cCCCCc---------------------------cceeEEeC---
Q psy12422 250 QEVFPEDEGVYVCTATNSLGTA------ETKCKLT-PLNSSN---------------------------ILDLKYKN--- 292 (356)
Q Consensus 250 ~~v~~~d~G~Y~C~a~n~~g~~------~~~~~l~-p~~~~~---------------------------~~~~~~~~--- 292 (356)
.+++.+|+|.|.|.+.|..+.. ...+.+. +...|. ...+.|.+
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~ 166 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNAL 166 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEEEESSTT
T ss_pred ccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEEEeCCCC
Confidence 9999999999999999876321 2223222 000010 11455653
Q ss_pred --------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12422 293 --------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTV 329 (356)
Q Consensus 293 --------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 329 (356)
..+.|.|..+..+|+|.|+|.|.|..+.......+.+
T Consensus 167 ~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l 211 (214)
T 2zg1_A 167 SPLDPETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQL 211 (214)
T ss_dssp SSSCSSCCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEEC
T ss_pred ccCCCCceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEE
Confidence 2468999999999999999999998765444444433
No 401
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.59 E-value=5.4e-15 Score=100.62 Aligned_cols=71 Identities=23% Similarity=0.345 Sum_probs=60.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v 75 (356)
|+++.|.|.+.|.| |.+.|+|+|..+....+ ....++ .|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 24 G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~-~~~~~~--~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 24 GDLLQLRCRLRDDV-QSINWLRDGVQLVESNR-TRITGE--EVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp TSCEEEECCEESSC-CEEEEEBTTBCCCCCSS-EEECSS--EEEESSCCGGGSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCeEEEEEECCCCC-CceEEEECCEecCCCCC-EEEeCC--EEEECCCChHHCEEEEEEeccCCCcEEEEEEEEE
Confidence 78999999999998 79999999998875443 222333 8999999999999999999999999988888876
No 402
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.59 E-value=1.8e-15 Score=104.14 Aligned_cols=75 Identities=23% Similarity=0.382 Sum_probs=62.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCe--eEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDY--SMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v 75 (356)
|+++.|.|.+.|.|.|.+.|+|+|..+..... .....++..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 23 G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 23 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp TCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEEEE
Confidence 78999999999999999999999999865321 1122223348999999999999999999999999988888876
No 403
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.59 E-value=1.3e-14 Score=118.18 Aligned_cols=81 Identities=15% Similarity=0.275 Sum_probs=58.8
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCC--CCCeEEEEEC--CEEcc-----------------CCCceeEEEe--CC
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGD--PEPRVSWTKN--GQPLN-----------------SSNILDLKYK--NG 243 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~--p~p~i~W~~~--g~~~~-----------------~~~~~~~~~~--~~ 243 (356)
..++.+...+..+.+.+|++++|.|.+.+. |.+.+.|+|. +..+. ...++....+ .+
T Consensus 4 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 83 (256)
T 3juy_B 4 HHHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN 83 (256)
T ss_dssp ---CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred ccceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence 345666777788999999999999999874 6778999973 21110 0123444422 44
Q ss_pred EEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 244 VASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 244 ~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
..+|.|.+++.+|+|.|.|.|.|.
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGE 107 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCC
T ss_pred EEEEEECCCCcccCEEEEEeEEec
Confidence 678999999999999999999997
No 404
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.59 E-value=1.3e-15 Score=104.83 Aligned_cols=82 Identities=24% Similarity=0.509 Sum_probs=67.6
Q ss_pred CceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCcee-EEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEE
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILD-LKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKC 275 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 275 (356)
....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....... ........+|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 45778999999999999999999999999999887543321 12223334899999999999999999999999988887
Q ss_pred EEe
Q psy12422 276 KLT 278 (356)
Q Consensus 276 ~l~ 278 (356)
.|.
T Consensus 96 ~l~ 98 (100)
T 3caf_A 96 HLD 98 (100)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 405
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.59 E-value=8.8e-15 Score=101.21 Aligned_cols=75 Identities=19% Similarity=0.252 Sum_probs=62.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC---CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR---DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~---~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|++++|.|.+.+ |.+.|+|||||..+... ++.+...+....|.|.+++.+|+|.|+|.|.| ....+.|.|..
T Consensus 22 G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~~l~V~~ 96 (103)
T 1x44_A 22 GERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG----GQSSAKLSVDL 96 (103)
T ss_dssp TEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT----EEEEEEEEEEC
T ss_pred CCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC----CcEEEEEEEeC
Confidence 789999999977 77999999999999754 44566666677999999999999999999977 56777888876
Q ss_pred ccc
Q psy12422 78 EEE 80 (356)
Q Consensus 78 ~~~ 80 (356)
.+.
T Consensus 97 ~p~ 99 (103)
T 1x44_A 97 KSG 99 (103)
T ss_dssp CCS
T ss_pred CCC
Confidence 543
No 406
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.59 E-value=2.7e-15 Score=119.40 Aligned_cols=138 Identities=19% Similarity=0.181 Sum_probs=91.6
Q ss_pred CceeecCCCeEEEEEEEcC-CCCCe----EEEEECCEEccC-------------CCceeEEE-----eCCEEEEEEccCC
Q psy12422 197 TDKTIDDGQCLDLSAVVKG-DPEPR----VSWTKNGQPLNS-------------SNILDLKY-----KNGVASLQIQEVF 253 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g-~p~p~----i~W~~~g~~~~~-------------~~~~~~~~-----~~~~~~L~i~~v~ 253 (356)
..+.+.+|+++.|.|.+.+ .+.+. +.|++++..... ..+..+.. ..+..+|.|.+++
T Consensus 7 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 86 (221)
T 3eow_R 7 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLR 86 (221)
T ss_dssp CCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSS
T ss_pred CcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCC
Confidence 3456789999999999943 45444 999998642211 22222222 1234589999999
Q ss_pred CCCCeEEEEEEEcCC-CceEEEEEEecCCCCc-----------------cc----------eeEEeC-------------
Q psy12422 254 PEDEGVYVCTATNSL-GTAETKCKLTPLNSSN-----------------IL----------DLKYKN------------- 292 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~-g~~~~~~~l~p~~~~~-----------------~~----------~~~~~~------------- 292 (356)
.+|+|.|.|.+.|.. +.....+.|.+...|. +. .+.|..
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~ 166 (221)
T 3eow_R 87 VEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPG 166 (221)
T ss_dssp CCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECC
T ss_pred hHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcccCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeec
Confidence 999999999999976 5555544443111110 00 455521
Q ss_pred -------CeEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCCC
Q psy12422 293 -------GVASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAAN 336 (356)
Q Consensus 293 -------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 336 (356)
..+.|.|..+..+|+|.|+|.|.|..+.... .+.|...|..+
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~--~~~v~~~~~~~ 215 (221)
T 3eow_R 167 FLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQ--LLTVSLTVYYP 215 (221)
T ss_dssp CCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCE--EEEECCCCCC-
T ss_pred CCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCe--EEEEEEEEEcc
Confidence 1357999999999999999999999876555 55566666543
No 407
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.58 E-value=9.6e-15 Score=117.27 Aligned_cols=130 Identities=19% Similarity=0.221 Sum_probs=87.5
Q ss_pred CCceeecCCCeEEEEEEEcCCCC-C-eEEEEECC--EEc------------cCCCceeEEEeCCEEEEEEccCCCCCCeE
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDPE-P-RVSWTKNG--QPL------------NSSNILDLKYKNGVASLQIQEVFPEDEGV 259 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p~-p-~i~W~~~g--~~~------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 259 (356)
+....+.+|++++|.|.+.+.++ + .+.|+|++ ..+ ....++......+...|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 55678899999999999987653 4 69999853 221 01234444445667799999999999999
Q ss_pred EEEEEEcCCCce-----EEEEEEe--cCCCCcc----------------------------ceeEEeCC-----------
Q psy12422 260 YVCTATNSLGTA-----ETKCKLT--PLNSSNI----------------------------LDLKYKNG----------- 293 (356)
Q Consensus 260 Y~C~a~n~~g~~-----~~~~~l~--p~~~~~~----------------------------~~~~~~~~----------- 293 (356)
|.|.|.|..+.. ...+.+. +..+|.+ ..+.|.++
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 999999988721 1111110 0000100 13444321
Q ss_pred ------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEE
Q psy12422 294 ------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKC 325 (356)
Q Consensus 294 ------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 325 (356)
.+.|.|.++..+|+|.|+|.|.|..+..+..+
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 14588999999999999999999987755544
No 408
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.58 E-value=1.3e-14 Score=116.96 Aligned_cols=78 Identities=19% Similarity=0.200 Sum_probs=60.2
Q ss_pred ecccCCceeecCCCeEEEEEEEcCCC----CCeEEEEEC--CEEcc------------CCCceeEEEeCCEEEEEEccCC
Q psy12422 192 FANKLTDKTIDDGQCLDLSAVVKGDP----EPRVSWTKN--GQPLN------------SSNILDLKYKNGVASLQIQEVF 253 (356)
Q Consensus 192 ~~~~~~~~~v~~g~~~~l~C~~~g~p----~p~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~i~~v~ 253 (356)
+...+....+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...++.....++..+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 34455677899999999999999998 788999995 22110 1234555555667789999999
Q ss_pred CCCCeEEEEEEEcCCC
Q psy12422 254 PEDEGVYVCTATNSLG 269 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~g 269 (356)
.+|+|.|.|.|.|..+
T Consensus 84 ~~D~G~Y~C~~~n~~~ 99 (240)
T 1moe_A 84 ADDVATYYCQQTNEDP 99 (240)
T ss_dssp GGGCEEEEEEECSSSS
T ss_pred hhhCEEEEEEEccCCc
Confidence 9999999999999854
No 409
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.58 E-value=2.6e-14 Score=116.11 Aligned_cols=81 Identities=16% Similarity=0.173 Sum_probs=62.0
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCC-----CCeEEEEECC--EEc------------cCCCceeEEEeCCEEEEEE
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDP-----EPRVSWTKNG--QPL------------NSSNILDLKYKNGVASLQI 249 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p-----~p~i~W~~~g--~~~------------~~~~~~~~~~~~~~~~L~i 249 (356)
.+.+...+..+.+.+|++++|.|.+.+.| .+.+.|+|++ ..+ ....++.....++..+|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 34455556778899999999999999988 6889999954 111 0123444555566779999
Q ss_pred ccCCCCCCeEEEEEEEcCCC
Q psy12422 250 QEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 250 ~~v~~~d~G~Y~C~a~n~~g 269 (356)
.+++.+|+|.|.|.|.|..+
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~ 133 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVP 133 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSS
T ss_pred CCCCcccCEEEEEEEEcCCc
Confidence 99999999999999999765
No 410
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=6e-15 Score=102.92 Aligned_cols=94 Identities=19% Similarity=0.241 Sum_probs=71.5
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCC---CCCeEEEEECCE-EccC--CCceeEEE--eC----CEEEEEEccCCC
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGD---PEPRVSWTKNGQ-PLNS--SNILDLKY--KN----GVASLQIQEVFP 254 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~---p~p~i~W~~~g~-~~~~--~~~~~~~~--~~----~~~~L~i~~v~~ 254 (356)
...+.|...|.++.+.+|++++|.|.+.|. |.|.|.|||+.. .+.. ...+.+.. .. ....|.|.++..
T Consensus 10 ~~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 89 (118)
T 2edn_A 10 EPTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVL 89 (118)
T ss_dssp CCSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCT
T ss_pred CCcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCCh
Confidence 345667777888999999999999999875 789999999752 2221 12333321 11 147899999999
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEecC
Q psy12422 255 EDEGVYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 255 ~d~G~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
+|+|.|+|+|.|..|...+.+.|.+.
T Consensus 90 ~D~G~Y~Cevsn~~g~~s~~~~L~V~ 115 (118)
T 2edn_A 90 GDRGYYRLEVKAKDTCDSCGFNIDVE 115 (118)
T ss_dssp TTCSCEEEEEECSSCEEEEEECCEEE
T ss_pred hhCEEEEEEEEEcCCcEEEEEEEEEE
Confidence 99999999999999988888877643
No 411
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=2.3e-14 Score=101.76 Aligned_cols=93 Identities=28% Similarity=0.424 Sum_probs=71.5
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeC----CEEEEEEccCCCCCCeEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKN----GVASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C 262 (356)
..||.+..... .. ......|.|.+.|+|.|.+.|+|+|..+............ ..+.|.|.+++.+|+|.|+|
T Consensus 6 ~~pP~i~~~~~-~~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 82 (118)
T 1wwc_A 6 YYPPRVVSLEE-PE--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTL 82 (118)
T ss_dssp CCCCCCCCCCC-CC--CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEE
T ss_pred ecCCceeccCC-Ce--eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEE
Confidence 45565544322 12 2366788999999999999999999999877655444322 34689999999999999999
Q ss_pred EEEcCCCceEEEEEEecCCC
Q psy12422 263 TATNSLGTAETKCKLTPLNS 282 (356)
Q Consensus 263 ~a~n~~g~~~~~~~l~p~~~ 282 (356)
.|.|..|....++.+.....
T Consensus 83 ~a~N~~G~~~~~~~l~v~~~ 102 (118)
T 1wwc_A 83 IAKNPLGTANQTINGHFLKE 102 (118)
T ss_dssp EEEETTEEEEEEEEECCSCC
T ss_pred EEECCCCeEeeEEEEEEccC
Confidence 99999999999998874433
No 412
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.58 E-value=1.4e-14 Score=115.07 Aligned_cols=74 Identities=20% Similarity=0.327 Sum_probs=55.2
Q ss_pred CCceeecCCCeEEEEEEEcCCC--CCeEEEEEC--CEEcc-----------------CCCceeEEEe--CCEEEEEEccC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDP--EPRVSWTKN--GQPLN-----------------SSNILDLKYK--NGVASLQIQEV 252 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~--g~~~~-----------------~~~~~~~~~~--~~~~~L~i~~v 252 (356)
+..+.+.+|++++|.|.+.+.| .+.+.|+|+ |..+. ...++....+ .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 3456789999999999999876 678999996 33221 0123333322 34578999999
Q ss_pred CCCCCeEEEEEEEcCCC
Q psy12422 253 FPEDEGVYVCTATNSLG 269 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~~g 269 (356)
+.+|+|.|.|.|.|..+
T Consensus 87 ~~~D~G~Y~C~~~~~~~ 103 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIV 103 (219)
T ss_dssp CGGGCEEEEEEEEETTT
T ss_pred CcccCEEEEEEEeccCc
Confidence 99999999999999863
No 413
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=1.2e-14 Score=100.49 Aligned_cols=79 Identities=23% Similarity=0.408 Sum_probs=68.0
Q ss_pred CCCCeecccCCc-eeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC-CceeEEEeCCEEEEEEccCCCCCCeEEEEEE
Q psy12422 187 MTPPQFANKLTD-KTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS-NILDLKYKNGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 187 ~~~p~~~~~~~~-~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
..+|.|...+.+ ..+.+|+++.|.|.+ +.|.+.+.|+++|..+... .++.+..++....|.|.+++.+|+|.|+|.|
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 91 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV 91 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE
Confidence 556777766655 789999999999999 7899999999999998876 6777777777789999999999999999999
Q ss_pred Ec
Q psy12422 265 TN 266 (356)
Q Consensus 265 ~n 266 (356)
.|
T Consensus 92 ~~ 93 (104)
T 1pd6_A 92 GG 93 (104)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 414
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=3.1e-15 Score=105.59 Aligned_cols=92 Identities=23% Similarity=0.286 Sum_probs=70.4
Q ss_pred CeecccCCceeecCCCeEEEEEEEcCC---CCCeEEEEECCEE-cc--CCCceeEE--EeC----CEEEEEEccCCCCCC
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVKGD---PEPRVSWTKNGQP-LN--SSNILDLK--YKN----GVASLQIQEVFPEDE 257 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~g~---p~p~i~W~~~g~~-~~--~~~~~~~~--~~~----~~~~L~i~~v~~~d~ 257 (356)
|.|...|.++.+.+|++++|.|.+.|. |.|.|.|||++.. +. ...++.+. ... ....|.|.+++.+|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 557777888899999999999999764 8999999997421 11 12333332 111 147899999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEecCC
Q psy12422 258 GVYVCTATNSLGTAETKCKLTPLN 281 (356)
Q Consensus 258 G~Y~C~a~n~~g~~~~~~~l~p~~ 281 (356)
|.|+|+|.|..|...+++.|.+..
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999988888877443
No 415
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=7.4e-15 Score=100.75 Aligned_cols=76 Identities=21% Similarity=0.324 Sum_probs=63.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEEE 80 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 80 (356)
|+++.|.|.+.|.| |.|+|+|+|..+..... ....++ .|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+.+.
T Consensus 18 G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~-~~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 93 (99)
T 2cr3_A 18 GDLLQLRCRLRDDV-QSINWLRDGVQLAESNR-TRITGE--EVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALP 93 (99)
T ss_dssp TSCEEEECCCCSSC-CEEEEEESSSBCCCCSS-EEECSS--EEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBCSCCS
T ss_pred CCcEEEEEEecCCC-CeEEEEECCEECCCCCc-EEEECC--EEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEecCCC
Confidence 78999999999987 79999999988865432 222233 899999999999999999999999998888888876543
No 416
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.7e-15 Score=104.44 Aligned_cols=80 Identities=23% Similarity=0.358 Sum_probs=70.2
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC----ceeEEEeCCEEEEEEccCCCCCCeEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN----ILDLKYKNGVASLQIQEVFPEDEGVYVC 262 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 262 (356)
..||.|...+.+..+.+|+.+.|.|.+.+.| +.+.|+|+|..+.... ++.+..++....|.|.+++.+|+|.|+|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 84 (101)
T 2edk_A 6 SGPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQV 84 (101)
T ss_dssp CCCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEE
T ss_pred cCCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEE
Confidence 4567787778889999999999999999988 9999999999988766 5566777777899999999999999999
Q ss_pred EEEcC
Q psy12422 263 TATNS 267 (356)
Q Consensus 263 ~a~n~ 267 (356)
.|.|.
T Consensus 85 ~a~n~ 89 (101)
T 2edk_A 85 ITNGG 89 (101)
T ss_dssp ECSSC
T ss_pred EEcCC
Confidence 99983
No 417
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.57 E-value=1.9e-15 Score=108.17 Aligned_cols=93 Identities=22% Similarity=0.410 Sum_probs=76.8
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCe-EEEEECCEEccC--CCceeEE--EeCC--EEEEEEccCCCCCC-e
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPR-VSWTKNGQPLNS--SNILDLK--YKNG--VASLQIQEVFPEDE-G 258 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-i~W~~~g~~~~~--~~~~~~~--~~~~--~~~L~i~~v~~~d~-G 258 (356)
..+|.+.. +....+.+|+.+.|.|.+.|+|.|. +.|++++..+.. ..++.+. .... .++|.|.+++.+|. |
T Consensus 12 ~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G 90 (122)
T 2cry_A 12 NGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQT 90 (122)
T ss_dssp CSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHS
T ss_pred ecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCc
Confidence 56777777 7778899999999999999999997 999999988875 2344432 2233 56899999999998 9
Q ss_pred EEEEEEEcCCCceEEEEEEecC
Q psy12422 259 VYVCTATNSLGTAETKCKLTPL 280 (356)
Q Consensus 259 ~Y~C~a~n~~g~~~~~~~l~p~ 280 (356)
.|+|.|.|..|.....+.|...
T Consensus 91 ~Y~C~a~N~~G~~~~~~~l~V~ 112 (122)
T 2cry_A 91 IYNCTAWNSFGSDTEIIRLKEQ 112 (122)
T ss_dssp CEEEEEECSSCEEEEEECCCCS
T ss_pred eEEEEEECCCCeEEEEEEEEEC
Confidence 9999999999999988887743
No 418
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.57 E-value=3.7e-14 Score=112.36 Aligned_cols=74 Identities=19% Similarity=0.174 Sum_probs=56.1
Q ss_pred CCceeecCCCeEEEEEEE-cCCC-CCeEEEEECC--EEcc------------CCCceeEEEeCCEEEEEEccCCCCCCeE
Q psy12422 196 LTDKTIDDGQCLDLSAVV-KGDP-EPRVSWTKNG--QPLN------------SSNILDLKYKNGVASLQIQEVFPEDEGV 259 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~-~g~p-~p~i~W~~~g--~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 259 (356)
+....+.+|+++.|.|.+ .+.+ .+.+.|+|++ ..+. ...++......+...|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 456789999999999995 5553 5789999943 2110 1234444455667799999999999999
Q ss_pred EEEEEEcCCC
Q psy12422 260 YVCTATNSLG 269 (356)
Q Consensus 260 Y~C~a~n~~g 269 (356)
|.|.|.|..+
T Consensus 87 Y~C~~~~~~~ 96 (216)
T 2xzc_L 87 YYCGTWDSSL 96 (216)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEEeCCC
Confidence 9999999876
No 419
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.57 E-value=1.9e-14 Score=97.02 Aligned_cols=75 Identities=27% Similarity=0.394 Sum_probs=65.1
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
++.+...+....+.+|+.+.|.|.+.|+|.|.+.|+++|..+..... ..|.|.+++.+|+|.|+|.|.|..
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~~ 73 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDR 73 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEEEECSS
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCC---------CeEEECCCCHHhCEEEEEEEEcCC
Confidence 45666677778899999999999999999999999999998865431 379999999999999999999999
Q ss_pred CceE
Q psy12422 269 GTAE 272 (356)
Q Consensus 269 g~~~ 272 (356)
|...
T Consensus 74 g~~~ 77 (91)
T 3bfo_A 74 DSQD 77 (91)
T ss_dssp CEEE
T ss_pred CCEE
Confidence 9654
No 420
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.57 E-value=2.9e-14 Score=115.45 Aligned_cols=78 Identities=17% Similarity=0.185 Sum_probs=59.5
Q ss_pred ecccCCceeecCCCeEEEEEEEcCCC-----CCeEEEEECC--EE---cc---------CCCceeEEEeCCEEEEEEccC
Q psy12422 192 FANKLTDKTIDDGQCLDLSAVVKGDP-----EPRVSWTKNG--QP---LN---------SSNILDLKYKNGVASLQIQEV 252 (356)
Q Consensus 192 ~~~~~~~~~v~~g~~~~l~C~~~g~p-----~p~i~W~~~g--~~---~~---------~~~~~~~~~~~~~~~L~i~~v 252 (356)
+...+..+.+.+|++++|.|.+.+.| .+.+.|+|+. .. +. ...++......+..+|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 83 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCC
Confidence 33445677899999999999999888 6889999832 11 10 123455555566779999999
Q ss_pred CCCCCeEEEEEEEcCCC
Q psy12422 253 FPEDEGVYVCTATNSLG 269 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~~g 269 (356)
+.+|+|.|.|.|.|..+
T Consensus 84 ~~~D~G~Y~C~~~n~~~ 100 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFP 100 (247)
T ss_dssp CGGGCEEEEEEECSSSS
T ss_pred CHHHCEEEEEEEccCCc
Confidence 99999999999999754
No 421
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=6.8e-15 Score=101.75 Aligned_cols=76 Identities=13% Similarity=0.178 Sum_probs=63.0
Q ss_pred CCceEEEEEeccCCC-CeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPP-PTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~-~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|++++|.|.+.+.|. +.+.|||||.++..+ ++.+...+...+|.|.+++.+|+|.|+|.| ++...++.|.|.++
T Consensus 23 G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~a~L~V~~~ 98 (104)
T 2eny_A 23 GESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSV----RGLTSKASLIVRER 98 (104)
T ss_dssp SCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEE----TTEEEEECEEEECC
T ss_pred CCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEE----CCeeEEEEEEEeCC
Confidence 789999999988875 489999999998754 455666666779999999999999999998 44567888888876
Q ss_pred cc
Q psy12422 79 EE 80 (356)
Q Consensus 79 ~~ 80 (356)
+.
T Consensus 99 p~ 100 (104)
T 2eny_A 99 SG 100 (104)
T ss_dssp CS
T ss_pred Cc
Confidence 54
No 422
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.57 E-value=1.4e-14 Score=113.34 Aligned_cols=129 Identities=16% Similarity=0.168 Sum_probs=85.6
Q ss_pred ceeecCCCeEEEEEEEc----CCCCCeEEEEECCEEccC------------CCceeEEEeCCEEEEEEccCCCCCCeEEE
Q psy12422 198 DKTIDDGQCLDLSAVVK----GDPEPRVSWTKNGQPLNS------------SNILDLKYKNGVASLQIQEVFPEDEGVYV 261 (356)
Q Consensus 198 ~~~v~~g~~~~l~C~~~----g~p~p~i~W~~~g~~~~~------------~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 261 (356)
.+.+.+|+++.|.|.+. +.|.+.+.|++++..+.. ..+..+. ..+..+|.|.+++.+|+|.|.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEE
Confidence 46788999999999995 346788999999887621 1112111 123358999999999999999
Q ss_pred EEEEcCCCce-----EEEEEEecCC---CCccc-----------------------eeEEeCCe----------------
Q psy12422 262 CTATNSLGTA-----ETKCKLTPLN---SSNIL-----------------------DLKYKNGV---------------- 294 (356)
Q Consensus 262 C~a~n~~g~~-----~~~~~l~p~~---~~~~~-----------------------~~~~~~~~---------------- 294 (356)
|.|.|..|.. ...+.|.+.. .|.+. .+.|.++.
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~ 161 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPET 161 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTT
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCCCceEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCC
Confidence 9999987653 2344443111 11111 34443211
Q ss_pred EEE---EEecCCCCCCeEEEEEEEcCCcceEEEEEE
Q psy12422 295 ASL---QIQEVFPEDEGVYVCTATNSLGTAETKCKL 327 (356)
Q Consensus 295 ~~L---~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 327 (356)
..+ .+..+..+|.|.|+|.|.|..|..++.+++
T Consensus 162 ~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 162 ELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred cEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 111 234455789999999999999998887664
No 423
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=3.5e-15 Score=105.31 Aligned_cols=77 Identities=23% Similarity=0.437 Sum_probs=60.5
Q ss_pred CCceEEEEEeccC---CCCeeEEeeCCEE-cc---cCCeeEE--ecC----CeEEEEEeeCCCCCCeEEEEEEEeCCcee
Q psy12422 1 MQNVIKVKVGSTK---PPPTVKWYKGNRE-LS---KRDYSMS--YSD----GVVSMEIIDCKPEDSGEYKCVATNKHGTD 67 (356)
Q Consensus 1 g~~v~l~C~~~g~---p~~~v~W~k~g~~-l~---~~~~~~~--~~~----~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 67 (356)
|++++|.|.+.|. |.|.|.|||++.. +. ..++.+. ..+ ..+.|+|.+++.+|+|.|+|+|.|..|..
T Consensus 22 G~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~g~~ 101 (126)
T 2dav_A 22 GEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFD 101 (126)
T ss_dssp TCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECSSCEE
T ss_pred CCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeCCCcE
Confidence 7899999999764 8999999997421 11 1222221 111 24689999999999999999999999999
Q ss_pred EEEEEEEEec
Q psy12422 68 ETNCVVIVES 77 (356)
Q Consensus 68 ~~~~~l~v~~ 77 (356)
+..+.|.|..
T Consensus 102 ~~~~~L~V~~ 111 (126)
T 2dav_A 102 SCSFDLEVHE 111 (126)
T ss_dssp EECCEEEEEC
T ss_pred EEEEEEEEEe
Confidence 9999999998
No 424
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.56 E-value=1e-13 Score=112.92 Aligned_cols=73 Identities=21% Similarity=0.222 Sum_probs=56.5
Q ss_pred CceeecCCCeEEEEEEEcCC--CCCeEEEEECC--EEcc------------CCCceeEEEeCCEEEEEEccCCCCCCeEE
Q psy12422 197 TDKTIDDGQCLDLSAVVKGD--PEPRVSWTKNG--QPLN------------SSNILDLKYKNGVASLQIQEVFPEDEGVY 260 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~--p~p~i~W~~~g--~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 260 (356)
....+.+|++++|.|.+.+. |.+.+.|+|+. .... ...++.....+...+|.|.+++.+|+|.|
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp SEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 35689999999999999887 78889999842 1111 12345555556677899999999999999
Q ss_pred EEEEEcCCC
Q psy12422 261 VCTATNSLG 269 (356)
Q Consensus 261 ~C~a~n~~g 269 (356)
.|.|.|..+
T Consensus 90 ~C~~~~~~~ 98 (256)
T 3ux9_B 90 YCQVRDNNE 98 (256)
T ss_dssp EEEEEETTT
T ss_pred EEEEEECCC
Confidence 999998654
No 425
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=1.7e-14 Score=102.46 Aligned_cols=79 Identities=19% Similarity=0.233 Sum_probs=64.6
Q ss_pred CceEEEEEeccCCCCeeEEeeCCEEcccCC-eeEEecC----CeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 2 QNVIKVKVGSTKPPPTVKWYKGNRELSKRD-YSMSYSD----GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 2 ~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-~~~~~~~----~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
+...|.|.+.|.|.|.++|+|+|+.+.... ....... ....|.|.+++.+|+|.|+|.|.|..|.+.+.+.|.|.
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 100 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFL 100 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCS
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEEc
Confidence 346799999999999999999999997654 2232211 34589999999999999999999999999999998887
Q ss_pred cccc
Q psy12422 77 SEEE 80 (356)
Q Consensus 77 ~~~~ 80 (356)
..+.
T Consensus 101 ~~P~ 104 (118)
T 1wwc_A 101 KEPF 104 (118)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 6543
No 426
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.55 E-value=2.1e-14 Score=99.31 Aligned_cols=77 Identities=23% Similarity=0.484 Sum_probs=69.2
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (356)
..+|.+...+.+..+.+|+++.|.|.+.+.|.| +.|++++..+....++.+..++....|.|.+++.+|+|.|+|.+
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 82 (103)
T 2e7b_A 6 SGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCSF 82 (103)
T ss_dssp CCCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEEC
T ss_pred CCCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEEE
Confidence 466778777888999999999999999999999 99999999998777887777777889999999999999999983
No 427
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=1.4e-14 Score=100.49 Aligned_cols=75 Identities=19% Similarity=0.278 Sum_probs=62.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|++++|.|.+.+.|.+ +.|||+|..+... ++.+...+....|.|.+++.+|+|.|+|.|.|..+ .+.|.|.+++
T Consensus 25 G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~----~~~l~V~~~P 99 (104)
T 2e6p_A 25 SERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA----FFGVTVQDPS 99 (104)
T ss_dssp SSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC----CEEEEEECCC
T ss_pred CCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE----EEEEEEcCCC
Confidence 7899999999999999 9999999998754 45555566677999999999999999999988743 5677777654
Q ss_pred c
Q psy12422 80 E 80 (356)
Q Consensus 80 ~ 80 (356)
.
T Consensus 100 ~ 100 (104)
T 2e6p_A 100 G 100 (104)
T ss_dssp C
T ss_pred C
Confidence 4
No 428
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=7.7e-14 Score=96.72 Aligned_cols=90 Identities=20% Similarity=0.210 Sum_probs=73.4
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC----------ceeEEEeCCEEEEEEccCCCCC
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN----------ILDLKYKNGVASLQIQEVFPED 256 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~----------~~~~~~~~~~~~L~i~~v~~~d 256 (356)
..+|.|...+.+..+.+|+++.|.|.+.+ .|.+.|+|||..+..+. ++.+..++..++|+|++++.+|
T Consensus 6 ~p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D 83 (112)
T 2e6q_A 6 SGTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQD 83 (112)
T ss_dssp CSCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTT
T ss_pred cCCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHH
Confidence 45577888889999999999999999987 77899999999998876 7777667778899999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEecCC
Q psy12422 257 EGVYVCTATNSLGTAETKCKLTPLN 281 (356)
Q Consensus 257 ~G~Y~C~a~n~~g~~~~~~~l~p~~ 281 (356)
+|.|+|...+ ....++.|.+..
T Consensus 84 ~G~Y~~~~~~---~~~ssA~L~V~~ 105 (112)
T 2e6q_A 84 SGALVGFSCP---GVQDSAALTIQE 105 (112)
T ss_dssp CSEEEEEEET---TEEEEEEEEEEC
T ss_pred CccEEEEEEC---CeeEEEEEEEeC
Confidence 9999774443 344556665443
No 429
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=2.4e-14 Score=98.21 Aligned_cols=80 Identities=21% Similarity=0.481 Sum_probs=67.4
Q ss_pred CCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEE
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKC 275 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 275 (356)
+....+.+|+.+.|.|.+.|.| |.+.|+|++..+....++.+. . ..|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~--~--~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 84 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT--G--EEVEVQDSVPADSGLYACVTSSPSGSDTTYF 84 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC--S--SEEEETTCCTTTCEEEEEEEEETTEEEEEEE
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE--C--CEEEEccCCHHHCEEEEEEEEeCCceEEEEE
Confidence 4556788999999999999987 799999999888766554432 3 3899999999999999999999999988888
Q ss_pred EEecC
Q psy12422 276 KLTPL 280 (356)
Q Consensus 276 ~l~p~ 280 (356)
.|.+.
T Consensus 85 ~l~V~ 89 (99)
T 2cr3_A 85 SVNVS 89 (99)
T ss_dssp EECBC
T ss_pred EEEEe
Confidence 88744
No 430
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.55 E-value=3.3e-14 Score=97.69 Aligned_cols=74 Identities=26% Similarity=0.360 Sum_probs=63.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+. .|.+.+.|||||..+..+ ++.+...+....|.|.+++.+|+|.|+|.| |.....+.|.|.+++
T Consensus 23 G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 23 GGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELFVRSGP 97 (100)
T ss_dssp TEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEEECCSC
T ss_pred CCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEEEecCC
Confidence 78899999998 799999999999998654 555666666778999999999999999999 677788889988754
No 431
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.55 E-value=4e-14 Score=113.01 Aligned_cols=139 Identities=17% Similarity=0.274 Sum_probs=90.1
Q ss_pred CCceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EEcc-----------------CCCceeEEEe--CCEEEEEEccC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QPLN-----------------SSNILDLKYK--NGVASLQIQEV 252 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~~~-----------------~~~~~~~~~~--~~~~~L~i~~v 252 (356)
+....+.+|++++|.|.+.+.| .+.+.|+|++ ..+. ...++....+ .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 3456789999999999999887 6789999843 2110 0234444332 35679999999
Q ss_pred CCCCCeEEEEEEEcCCCc---eEEEEEEec--CCC----------------------------CccceeEEeCC------
Q psy12422 253 FPEDEGVYVCTATNSLGT---AETKCKLTP--LNS----------------------------SNILDLKYKNG------ 293 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~~g~---~~~~~~l~p--~~~----------------------------~~~~~~~~~~~------ 293 (356)
+.+|+|.|.|.+.|..+. ....+.+.. ... |....+.|.++
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~ 166 (227)
T 1mju_H 87 TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGV 166 (227)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTE
T ss_pred CcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCc
Confidence 999999999999986321 111222210 000 00003444321
Q ss_pred --------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEEEEecCCC
Q psy12422 294 --------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLTVRSTPAA 335 (356)
Q Consensus 294 --------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 335 (356)
.+.|.|..+..+| |.|+|.|.|..+.....+.+.+.++|..
T Consensus 167 ~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~ 221 (227)
T 1mju_H 167 HTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIK 221 (227)
T ss_dssp EECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC---
T ss_pred EECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCC
Confidence 2468898888888 9999999998877777777766666553
No 432
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.54 E-value=3e-14 Score=99.43 Aligned_cols=76 Identities=25% Similarity=0.430 Sum_probs=59.3
Q ss_pred CCceEEEEEeccCCC---CeeEEeeCCEE-ccc---CCeeEE--ec----CCeEEEEEeeCCCCCCeEEEEEEEeCCcee
Q psy12422 1 MQNVIKVKVGSTKPP---PTVKWYKGNRE-LSK---RDYSMS--YS----DGVVSMEIIDCKPEDSGEYKCVATNKHGTD 67 (356)
Q Consensus 1 g~~v~l~C~~~g~p~---~~v~W~k~g~~-l~~---~~~~~~--~~----~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 67 (356)
|++++|.|.+.|.|. |.|+|||++.. +.. .++.+. .. .+...|+|.+++.+|+|.|+|.|.|..|..
T Consensus 19 G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 98 (108)
T 3cx2_A 19 GGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFD 98 (108)
T ss_dssp TCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred CCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEecCCCce
Confidence 789999999999998 99999998722 211 122221 10 124689999999999999999999999999
Q ss_pred EEEEEEEEe
Q psy12422 68 ETNCVVIVE 76 (356)
Q Consensus 68 ~~~~~l~v~ 76 (356)
++.+.|.|.
T Consensus 99 ~~~~~L~V~ 107 (108)
T 3cx2_A 99 CSNFNLTVH 107 (108)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 999999885
No 433
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.54 E-value=3.4e-14 Score=116.26 Aligned_cols=76 Identities=21% Similarity=0.343 Sum_probs=51.0
Q ss_pred ecCCCeEEEEEEEcC-CC-CCeEEEEECCEEccCCCce--eEEEeCC----EEEEEEccCCCCCCeEEEEEEEcCCCceE
Q psy12422 201 IDDGQCLDLSAVVKG-DP-EPRVSWTKNGQPLNSSNIL--DLKYKNG----VASLQIQEVFPEDEGVYVCTATNSLGTAE 272 (356)
Q Consensus 201 v~~g~~~~l~C~~~g-~p-~p~i~W~~~g~~~~~~~~~--~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 272 (356)
+.+|+.++|.|.+.+ +| ++.+.| ++..+...... .....++ .+.|.|.....+| |.|+|.+.|..+...
T Consensus 180 ~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~ 256 (267)
T 3u1s_H 180 STSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 256 (267)
T ss_dssp GEETTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEE
T ss_pred cCCCCcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcc
Confidence 357999999999976 55 457999 55444321110 0011111 2478999998889 999999999988776
Q ss_pred EEEEEec
Q psy12422 273 TKCKLTP 279 (356)
Q Consensus 273 ~~~~l~p 279 (356)
....+.+
T Consensus 257 ~~~~~~~ 263 (267)
T 3u1s_H 257 VDKKVEP 263 (267)
T ss_dssp EEEECCC
T ss_pred eEEEccc
Confidence 6666553
No 434
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.54 E-value=9.8e-14 Score=114.63 Aligned_cols=76 Identities=22% Similarity=0.411 Sum_probs=57.0
Q ss_pred ccCCceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EEcc-----------------CCCceeEEEe--CCEEEEEEc
Q psy12422 194 NKLTDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QPLN-----------------SSNILDLKYK--NGVASLQIQ 250 (356)
Q Consensus 194 ~~~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~~~-----------------~~~~~~~~~~--~~~~~L~i~ 250 (356)
..+....+.+|++++|.|.+.+.| .+.+.|+|++ ..+. ...++....+ .+..+|.|.
T Consensus 31 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 110 (282)
T 1qok_A 31 QQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLS 110 (282)
T ss_dssp EECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEEC
Confidence 344567899999999999999886 5789999953 1110 1234444332 345789999
Q ss_pred cCCCCCCeEEEEEEEcCCC
Q psy12422 251 EVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 251 ~v~~~d~G~Y~C~a~n~~g 269 (356)
+++.+|+|.|.|.+.|..|
T Consensus 111 ~v~~~DsG~Y~C~~~n~~g 129 (282)
T 1qok_A 111 SLTSEDTAVYYCNEGTPTG 129 (282)
T ss_dssp SCCGGGCEEEEEEEECSSS
T ss_pred cCChhhCEEEEEEeccCCC
Confidence 9999999999999999876
No 435
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=1.3e-14 Score=100.42 Aligned_cols=76 Identities=20% Similarity=0.328 Sum_probs=63.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.+ |.+.+.|||+|..+... ++.+...+....|.|.+++.+|+|.|+|.|.| ....+.|.|..++
T Consensus 23 G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V~~~p 97 (103)
T 2edf_A 23 GEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA----SKSTASLHVEEKA 97 (103)
T ss_dssp TSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS----CEEEEEEEECCCS
T ss_pred CCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc----CCcEEEEEEeCCC
Confidence 789999999987 88899999999998654 45555566677899999999999999999988 3667888887765
Q ss_pred cc
Q psy12422 80 ES 81 (356)
Q Consensus 80 ~~ 81 (356)
..
T Consensus 98 ~~ 99 (103)
T 2edf_A 98 SG 99 (103)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 436
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=8.2e-14 Score=96.30 Aligned_cols=87 Identities=20% Similarity=0.336 Sum_probs=73.4
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.|...+.+..+.+|+++.|.|.+ +.|.|.+.|++++..+....++.+...+....|.|.+++.+|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2dku_A 6 SGANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD--- 81 (103)
T ss_dssp CCCCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE---
T ss_pred CCCCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE---
Confidence 456778888888999999999999995 8899999999999999888787777777788999999999999999998
Q ss_pred CCCceEEEEEEe
Q psy12422 267 SLGTAETKCKLT 278 (356)
Q Consensus 267 ~~g~~~~~~~l~ 278 (356)
.|.....+.|.
T Consensus 82 -~g~~~~~~~l~ 92 (103)
T 2dku_A 82 -IGQAQSRAQLL 92 (103)
T ss_dssp -CSSCBCCEEEE
T ss_pred -eCCceEEEEEE
Confidence 45544444444
No 437
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.53 E-value=1.6e-14 Score=117.90 Aligned_cols=80 Identities=10% Similarity=0.187 Sum_probs=47.4
Q ss_pred CeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEEC--CEEcc---C-C-------------CceeEE--EeCCEEEEE
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKN--GQPLN---S-S-------------NILDLK--YKNGVASLQ 248 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~--g~~~~---~-~-------------~~~~~~--~~~~~~~L~ 248 (356)
|.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|. +.... . . .+.... ......+|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 4455556678899999999999999999999999982 21110 0 0 011110 112335799
Q ss_pred EccCCCCCCeEEEEEEEcCCC
Q psy12422 249 IQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 249 i~~v~~~d~G~Y~C~a~n~~g 269 (356)
|.+++.+|+|.|.|.+.|..+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~ 103 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNY 103 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTS
T ss_pred ECCCCcccCEEEEEEEeeCCc
Confidence 999999999999999999765
No 438
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.53 E-value=5.2e-14 Score=95.70 Aligned_cols=71 Identities=17% Similarity=0.363 Sum_probs=60.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
|+++.|.|.+ +.|.+.++|||+|..+..+ ++.+...+...+|+|.+++.+|+|.|+|.| |.....+.|.|.
T Consensus 23 G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 23 GSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKFDLKVI 94 (95)
T ss_dssp TSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTEEEEEEEEEE
T ss_pred CCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCceEEEEEEEe
Confidence 7899999999 8899999999999988654 455666666779999999999999999999 566677777774
No 439
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=1.2e-14 Score=101.46 Aligned_cols=78 Identities=26% Similarity=0.367 Sum_probs=60.6
Q ss_pred CCceEEEEEeccC---CCCeeEEeeCCE-Eccc---CCeeEE--ecC----CeEEEEEeeCCCCCCeEEEEEEEeCCcee
Q psy12422 1 MQNVIKVKVGSTK---PPPTVKWYKGNR-ELSK---RDYSMS--YSD----GVVSMEIIDCKPEDSGEYKCVATNKHGTD 67 (356)
Q Consensus 1 g~~v~l~C~~~g~---p~~~v~W~k~g~-~l~~---~~~~~~--~~~----~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 67 (356)
|++++|.|.+.|. |.|.|+|||++. ++.. .++.+. ..+ ..++|+|.++..+|+|.|+|+|.|..|..
T Consensus 27 G~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~~g~~ 106 (118)
T 2edn_A 27 GKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCD 106 (118)
T ss_dssp TSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEECSSCEE
T ss_pred CCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEEcCCcE
Confidence 7899999999775 789999999752 2221 122221 111 24689999999999999999999999999
Q ss_pred EEEEEEEEecc
Q psy12422 68 ETNCVVIVESE 78 (356)
Q Consensus 68 ~~~~~l~v~~~ 78 (356)
+..+.|.|..+
T Consensus 107 s~~~~L~V~~~ 117 (118)
T 2edn_A 107 SCGFNIDVEAP 117 (118)
T ss_dssp EEEECCEEECC
T ss_pred EEEEEEEEEcC
Confidence 99999999764
No 440
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.53 E-value=5e-14 Score=107.94 Aligned_cols=126 Identities=19% Similarity=0.273 Sum_probs=83.7
Q ss_pred CceeecCCCeEEEEEEEcC-CCCCeEEEEEC-CEEcc------------CC--CceeEEEeCCEEEEEEccCCCCCCeEE
Q psy12422 197 TDKTIDDGQCLDLSAVVKG-DPEPRVSWTKN-GQPLN------------SS--NILDLKYKNGVASLQIQEVFPEDEGVY 260 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g-~p~p~i~W~~~-g~~~~------------~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y 260 (356)
..+.+.+|++++|.|.+.+ .+.+.|.|+++ +..+. .. .++.+ +....+|.|.+++.+|+|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRGDY 84 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCeEE
Confidence 3567899999999999854 34678999994 32221 01 22222 23345799999999999999
Q ss_pred EEEEEcCCCceEEEEEEec---CCCCcc------------------ceeEEeCCe--------EEEEEecCCCCCCeEEE
Q psy12422 261 VCTATNSLGTAETKCKLTP---LNSSNI------------------LDLKYKNGV--------ASLQIQEVFPEDEGVYV 311 (356)
Q Consensus 261 ~C~a~n~~g~~~~~~~l~p---~~~~~~------------------~~~~~~~~~--------~~L~i~~v~~~d~G~Y~ 311 (356)
.|.+.+.. .....+.|.+ ...|.+ ..+.|..++ .+|.+.. .+|+|.|+
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~gp~p~i~W~~~~~~l~~~~~~~l~~~~--~~d~g~Y~ 161 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQW--TNLRAPFK 161 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCCCCCEEEEEGGGTEEEEECSSCTTCEEEEEETTEEEEEESSSEEEEEC--SCCSSCEE
T ss_pred EEEEEcCC-eEEEEEEEEEECCCCCCEEEecCCCEEEEEEeCCCCCCEEEEEECCeECcCCCCCEEEEEE--hhcCccEE
Confidence 99998876 4444444442 111221 155665533 2445522 78999999
Q ss_pred EEEEcCCcceEEEEEE
Q psy12422 312 CTATNSLGTAETKCKL 327 (356)
Q Consensus 312 C~a~n~~g~~~~~~~l 327 (356)
|.|+|.+|..++...+
T Consensus 162 C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 162 CKAVNRVSQESEMEVV 177 (180)
T ss_dssp EEEEETTEEEEEEECC
T ss_pred EEEecCcCccccceeE
Confidence 9999999987775543
No 441
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.53 E-value=3.3e-14 Score=95.82 Aligned_cols=69 Identities=17% Similarity=0.344 Sum_probs=58.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeE-EEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDE-TNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~-~~~~l~v~~ 77 (356)
|+++.|.|.+.|.|.|.+.|||+|..+.... ...|.|.+++.+|+|.|+|.|.|..|... ..+.|.|.+
T Consensus 18 G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~--------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 18 GSTLVLQCVAVGSPIPHYQWFKNELPLTHET--------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 87 (91)
T ss_dssp TSCEEEECEEECSSCCEEEEEETTEECTTCC--------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC-
T ss_pred CCcEEEEEEeccCCCCEEEEEcCCeeCCcCC--------CCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEEEEeh
Confidence 7899999999999999999999999886442 12799999999999999999999998765 457777754
No 442
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.53 E-value=5.8e-14 Score=95.47 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=62.0
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.| .|.+.|+|+|..+....+.. ..++ .|.|.+++.+|+|.|+|.|.|..|.....+.|.|.++.
T Consensus 16 G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~-~~~~--~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 89 (95)
T 4hwu_A 16 GESLELQCMLKD--AAVISWTKDGVHLGPNNRTV-LIGE--YLQIKGATPRDSGLYACTAARTVDSETWIFMVNVTDAA 89 (95)
T ss_dssp TSCEEEECCCCT--TCEEEEEETTEEECCCSSEE-EETT--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCC-
T ss_pred CCEEEEEEEeCC--CCEEEEEECCEECCCCceEE-EeCC--EEEECcCCcccCEEEEEEEccCCCcEEEEEEEEEeCCc
Confidence 789999999987 47999999999997654322 2333 79999999999999999999999999999999998653
No 443
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=1.4e-13 Score=96.96 Aligned_cols=67 Identities=27% Similarity=0.382 Sum_probs=60.7
Q ss_pred eeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 199 KTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 199 ~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+.+|+.+.|.|.+. .|.+.+.|+|+|..+....++.+..++....|.|.+++.+|+|.|+|.|.|
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 89 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD 89 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec
Confidence 6788999999999996 888999999999999887777777667677999999999999999999999
No 444
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=4.8e-14 Score=97.37 Aligned_cols=71 Identities=20% Similarity=0.390 Sum_probs=58.9
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC--CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR--DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~--~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
|+++.|.|.+ +.|.+.|+|||||..+..+ ++.+...++...|.|.+++.+|+|.|+|.| +.....+.|.|.
T Consensus 31 G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 31 GHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV----GGEKCSTELFVK 103 (104)
T ss_dssp TSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE----TTEEECCEEEEE
T ss_pred CCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE----CCCcEEEEEEEe
Confidence 7899999999 7899999999999998754 455555666779999999999999999999 445556666664
No 445
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.52 E-value=6.3e-14 Score=111.49 Aligned_cols=131 Identities=15% Similarity=0.277 Sum_probs=86.4
Q ss_pred CceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EEcc-------------------CCCceeEEEe--CCEEEEEEcc
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QPLN-------------------SSNILDLKYK--NGVASLQIQE 251 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~~~-------------------~~~~~~~~~~--~~~~~L~i~~ 251 (356)
....+.+|++++|.|.+.+.| .+.+.|+++. .... ...++....+ .+..+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 8 GGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 345789999999999999876 6789999842 2110 0133444333 3467899999
Q ss_pred CCCCCCeEEEEEEEcCCC-----c--eEEEEEEec--CCC----------------------------CccceeEEeCC-
Q psy12422 252 VFPEDEGVYVCTATNSLG-----T--AETKCKLTP--LNS----------------------------SNILDLKYKNG- 293 (356)
Q Consensus 252 v~~~d~G~Y~C~a~n~~g-----~--~~~~~~l~p--~~~----------------------------~~~~~~~~~~~- 293 (356)
++.+|+|.|.|.+.|..+ . ....+.+.. ... |....+.|..+
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 167 (222)
T 1q9r_B 88 LRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 167 (222)
T ss_dssp CCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCC
Confidence 999999999999998653 1 112222220 000 00003344321
Q ss_pred -------------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy12422 294 -------------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCKLT 328 (356)
Q Consensus 294 -------------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 328 (356)
.+.|.|.++..+| |.|+|.|.|..|.......|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~ 220 (222)
T 1q9r_B 168 LSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 220 (222)
T ss_dssp BCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred eEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEecc
Confidence 1358999999999 999999999999876655543
No 446
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.52 E-value=5.7e-14 Score=110.76 Aligned_cols=127 Identities=17% Similarity=0.314 Sum_probs=83.6
Q ss_pred CCceeecCCCeEEEEEEEcCCC--CCeEEEEEC--CEEcc----------------CCCceeEEEe--CCEEEEEEccCC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDP--EPRVSWTKN--GQPLN----------------SSNILDLKYK--NGVASLQIQEVF 253 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~--g~~~~----------------~~~~~~~~~~--~~~~~L~i~~v~ 253 (356)
+....+.+|++++|.|.+.+.| .+.+.|+|+ |.... ...++.+..+ .+..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 3456789999999999999876 478999984 22211 1234444332 345689999999
Q ss_pred CCCCeEEEEEEEcCC--CceEEEEEEe--cCCC----------------------------CccceeEEeCC--------
Q psy12422 254 PEDEGVYVCTATNSL--GTAETKCKLT--PLNS----------------------------SNILDLKYKNG-------- 293 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~--g~~~~~~~l~--p~~~----------------------------~~~~~~~~~~~-------- 293 (356)
.+|+|.|.|.|.|.. +.. ..+.+. +... |....+.|..+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~-~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 87 TEDTATYYCANWDGDYWGQG-TLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp GGGCEEEEEEETTSSCBCCC-EEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred cccCEEEEEEEecCcccccc-eEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE
Confidence 999999999999863 211 122221 0000 10013444331
Q ss_pred ------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEE
Q psy12422 294 ------------VASLQIQEVFPEDEGVYVCTATNSLGTAETK 324 (356)
Q Consensus 294 ------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 324 (356)
.+.|.|..+..+| |.|+|.|.|..|.....
T Consensus 166 ~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 166 FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 2458999998877 99999999999876554
No 447
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=5.5e-15 Score=101.85 Aligned_cols=73 Identities=22% Similarity=0.317 Sum_probs=59.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-----CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-----DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-----~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v 75 (356)
|+++.|.|.+.+.| +.++|||||..+... ++.+...++...|.|.+++.+|+|.|+|.|.| ....+.|.|
T Consensus 23 G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~~l~V 97 (101)
T 2edk_A 23 GDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG----GQCEAELIV 97 (101)
T ss_dssp SCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS----CEECCBEEE
T ss_pred CCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC----CcEEEEEEE
Confidence 78999999999998 999999999998653 44566666677899999999999999999987 344556766
Q ss_pred ecc
Q psy12422 76 ESE 78 (356)
Q Consensus 76 ~~~ 78 (356)
.++
T Consensus 98 ~~~ 100 (101)
T 2edk_A 98 EEK 100 (101)
T ss_dssp ECC
T ss_pred eCC
Confidence 643
No 448
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.52 E-value=1.7e-13 Score=112.04 Aligned_cols=81 Identities=15% Similarity=0.204 Sum_probs=61.8
Q ss_pred CCeecccCCceeecCCCeEEEEEEEcCCC------CCeEEEEEC--CEEcc------------CCCceeEEEeCCEEEEE
Q psy12422 189 PPQFANKLTDKTIDDGQCLDLSAVVKGDP------EPRVSWTKN--GQPLN------------SSNILDLKYKNGVASLQ 248 (356)
Q Consensus 189 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p------~p~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~ 248 (356)
.+.+...+..+.+.+|++++|.|.+.+.| .+.+.|+++ |..+. ...++..........|.
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 34555566778899999999999999888 678999984 32111 12345554455677999
Q ss_pred EccCCCCCCeEEEEEEEcCCC
Q psy12422 249 IQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 249 i~~v~~~d~G~Y~C~a~n~~g 269 (356)
|.+++.+|+|.|.|.+.|..+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~ 105 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYP 105 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSS
T ss_pred ECCCCHHHCEEEEEEEecCCc
Confidence 999999999999999998754
No 449
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.52 E-value=6.5e-14 Score=95.87 Aligned_cols=72 Identities=19% Similarity=0.338 Sum_probs=59.3
Q ss_pred CCceEEEEEec-cCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEe
Q psy12422 1 MQNVIKVKVGS-TKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~-g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 76 (356)
|+++.|.|.+. |.|.+.+.|||++....... ....++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 25 G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~--~~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 25 GADVTFICTAKSKSPAYTLVWTRLHNGKLPSR--AMDFNG--ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 97 (98)
T ss_dssp TCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT--EEEETT--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce--eecCCC--EEEEeCCChhhCEEEEEEecCCCCccccEEEEEEe
Confidence 78999999997 79999999999754443332 222333 79999999999999999999999999988888875
No 450
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.51 E-value=1.2e-14 Score=103.14 Aligned_cols=88 Identities=30% Similarity=0.500 Sum_probs=67.0
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCC-----ceeEEEeCCEEEEEE--ccCCCCCCeE
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSN-----ILDLKYKNGVASLQI--QEVFPEDEGV 259 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~-----~~~~~~~~~~~~L~i--~~v~~~d~G~ 259 (356)
..+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+.... ......++....+.| .+++.+|+|.
T Consensus 7 ~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~ 86 (117)
T 2v9t_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (117)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEE
T ss_pred cCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEE
Confidence 567888888888899999999999999999999999999999887542 111111222222222 2668999999
Q ss_pred EEEEEEcCCCceEEE
Q psy12422 260 YVCTATNSLGTAETK 274 (356)
Q Consensus 260 Y~C~a~n~~g~~~~~ 274 (356)
|+|.|.|..|...+.
T Consensus 87 Y~C~a~N~~G~~~s~ 101 (117)
T 2v9t_A 87 YVCVARNYLGEAVSH 101 (117)
T ss_dssp EEEEEEETTEEEECC
T ss_pred EEEEEEeCccceEee
Confidence 999999999987653
No 451
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.51 E-value=2.5e-13 Score=108.08 Aligned_cols=63 Identities=13% Similarity=0.250 Sum_probs=46.7
Q ss_pred CCceEEEEEeccCC--CCeeEEeeC--CE---Ecc----------cCCeeEEe--cCCeEEEEEeeCCCCCCeEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKP--PPTVKWYKG--NR---ELS----------KRDYSMSY--SDGVVSMEIIDCKPEDSGEYKCVAT 61 (356)
Q Consensus 1 g~~v~l~C~~~g~p--~~~v~W~k~--g~---~l~----------~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a~ 61 (356)
|++|+|.|.+.+.+ .+.+.|||+ |+ .+. ..++.... ..+.++|+|.+++.+|+|.|.|.+.
T Consensus 16 G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~ 95 (229)
T 1hxm_A 16 GVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACD 95 (229)
T ss_dssp TCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEEe
Confidence 78999999997654 467999994 22 110 12343332 4567899999999999999999998
Q ss_pred eC
Q psy12422 62 NK 63 (356)
Q Consensus 62 n~ 63 (356)
+.
T Consensus 96 ~~ 97 (229)
T 1hxm_A 96 TL 97 (229)
T ss_dssp CC
T ss_pred cC
Confidence 75
No 452
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.51 E-value=1.5e-13 Score=95.85 Aligned_cols=94 Identities=21% Similarity=0.283 Sum_probs=70.9
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCE-Ecc-------CCCceeEE-EeCCEEEEEEccCCCCCC
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQ-PLN-------SSNILDLK-YKNGVASLQIQEVFPEDE 257 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~-~~~-------~~~~~~~~-~~~~~~~L~i~~v~~~d~ 257 (356)
..+|.+...+.++.+.+|+++.|.|.+.+.|.+.+.|++++. .+. ...++... .......|.|.+++.+|+
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 83 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDE 83 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGC
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHC
Confidence 345667777788899999999999999999999999999764 222 12234332 223467999999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEecCC
Q psy12422 258 GVYVCTATNSLGTAETKCKLTPLN 281 (356)
Q Consensus 258 G~Y~C~a~n~~g~~~~~~~l~p~~ 281 (356)
|.|+|.|.| .+.....+.|.+..
T Consensus 84 G~Y~C~~~n-~~~~~~~~~L~V~~ 106 (108)
T 3m45_A 84 GQYTCSLFT-MPVKTSKAYLTVLG 106 (108)
T ss_dssp EEEEEEECS-SSCEEEEEEEEEEC
T ss_pred eEEEEEEEc-CCCcEEEEEEEEEc
Confidence 999999999 88888887776443
No 453
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.51 E-value=7.2e-14 Score=99.90 Aligned_cols=80 Identities=18% Similarity=0.156 Sum_probs=61.7
Q ss_pred CCceEEEEEecc--CCCCeeEEeeCCEEccc-----C-CeeEEec---CCeEEEEEeeCCCCCCeEEEEEEEeCCceeEE
Q psy12422 1 MQNVIKVKVGST--KPPPTVKWYKGNRELSK-----R-DYSMSYS---DGVVSMEIIDCKPEDSGEYKCVATNKHGTDET 69 (356)
Q Consensus 1 g~~v~l~C~~~g--~p~~~v~W~k~g~~l~~-----~-~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 69 (356)
|+++.|.|.+.| .|.+.+.|+|+|..+.. . ....... .....|+|.+++.+|+|.|+|.|.|..|....
T Consensus 23 G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~ 102 (122)
T 3s35_X 23 GEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKN 102 (122)
T ss_dssp TCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCCCceEE
Confidence 799999999988 44568999999875431 1 1111111 13458999999999999999999999999999
Q ss_pred EEEEEEecccc
Q psy12422 70 NCVVIVESEEE 80 (356)
Q Consensus 70 ~~~l~v~~~~~ 80 (356)
.+.|.|.+.+.
T Consensus 103 ~~~l~V~~~p~ 113 (122)
T 3s35_X 103 STFVRVHEKPF 113 (122)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEeccCe
Confidence 99999987643
No 454
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.51 E-value=1.7e-13 Score=95.59 Aligned_cols=78 Identities=24% Similarity=0.422 Sum_probs=68.7
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.|...+....+.+|+++.|.|.+.+. |.+.|++++..+....++.+..++....|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 83 (108)
T 2dm7_A 6 SGPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ 83 (108)
T ss_dssp CCCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETT
T ss_pred CCCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcC
Confidence 567888777888899999999999999765 689999999998877777777777788899999999999999999955
No 455
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.50 E-value=1.3e-13 Score=109.58 Aligned_cols=130 Identities=15% Similarity=0.312 Sum_probs=86.3
Q ss_pred CCceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EE---c-c--C-------------CCceeEEEe--CCEEEEEEc
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QP---L-N--S-------------SNILDLKYK--NGVASLQIQ 250 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~---~-~--~-------------~~~~~~~~~--~~~~~L~i~ 250 (356)
+..+.+.+|++++|.|.+.+.| .+.+.|+|++ .. + . . ..++....+ .+...|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 3456889999999999999877 6889999843 11 1 0 0 134444332 345689999
Q ss_pred cCCCCCCeEEEEEEEcCCCce-----EEEEEEec--CCCCc----------------------------cceeEEeCC--
Q psy12422 251 EVFPEDEGVYVCTATNSLGTA-----ETKCKLTP--LNSSN----------------------------ILDLKYKNG-- 293 (356)
Q Consensus 251 ~v~~~d~G~Y~C~a~n~~g~~-----~~~~~l~p--~~~~~----------------------------~~~~~~~~~-- 293 (356)
+++.+|+|.|.|.+.|..+.. ...+.+.. ...|. ...+.|.++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 999999999999999975321 12222220 00000 003444331
Q ss_pred ------------------eEEEEEecCCCCCCeEEEEEEEcCCcceEEEEE
Q psy12422 294 ------------------VASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 326 (356)
Q Consensus 294 ------------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 326 (356)
.+.|.|..+..+| |.|+|.|.|..|..++.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 167 SSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred ccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 2458888888867 9999999999998776554
No 456
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=1.2e-13 Score=95.76 Aligned_cols=75 Identities=13% Similarity=0.157 Sum_probs=59.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC-----------eeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD-----------YSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDET 69 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-----------~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 69 (356)
|+++.|.|.+.+ .|.++|||||++|..+. +.+...+...+|+|.+++.+|+|.|+|...+ ...+
T Consensus 23 G~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~~---~~~s 97 (112)
T 2e6q_A 23 GEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCP---GVQD 97 (112)
T ss_dssp TCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEET---TEEE
T ss_pred CCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEEC---CeeE
Confidence 789999999987 67899999999997653 3344445567899999999999999774433 3456
Q ss_pred EEEEEEecccc
Q psy12422 70 NCVVIVESEEE 80 (356)
Q Consensus 70 ~~~l~v~~~~~ 80 (356)
++.|.|.+.+.
T Consensus 98 sA~L~V~~~p~ 108 (112)
T 2e6q_A 98 SAALTIQESSG 108 (112)
T ss_dssp EEEEEEECSSC
T ss_pred EEEEEEeCCCc
Confidence 88899987654
No 457
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.50 E-value=1.6e-13 Score=113.24 Aligned_cols=72 Identities=18% Similarity=0.318 Sum_probs=52.7
Q ss_pred CCceeecCCCeEEEEEEEcCC--CCCeEEEEECC--EEcc-----------------CCCceeEEE--eCCEEEEEEccC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGD--PEPRVSWTKNG--QPLN-----------------SSNILDLKY--KNGVASLQIQEV 252 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~--p~p~i~W~~~g--~~~~-----------------~~~~~~~~~--~~~~~~L~i~~v 252 (356)
+....+.+|++++|.|.+.+. +.+.+.|++.. .... ...++.... .....+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 456789999999999999875 56789999732 1110 012333332 234578999999
Q ss_pred CCCCCeEEEEEEEcC
Q psy12422 253 FPEDEGVYVCTATNS 267 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~ 267 (356)
+.+|+|.|.|.+.|.
T Consensus 87 ~~~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 87 RSEDTAVYYCARSPS 101 (280)
T ss_dssp CSTTCEECCEEECSS
T ss_pred ChhhCEEEEEEEecC
Confidence 999999999999987
No 458
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.49 E-value=2.9e-13 Score=109.42 Aligned_cols=77 Identities=13% Similarity=0.258 Sum_probs=58.6
Q ss_pred ecccCCceeecCCCeEEEEEEEcCCCCCeEEEEE----------------CCEEccCC---CceeEEE-eCCEEEEEEcc
Q psy12422 192 FANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTK----------------NGQPLNSS---NILDLKY-KNGVASLQIQE 251 (356)
Q Consensus 192 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~----------------~g~~~~~~---~~~~~~~-~~~~~~L~i~~ 251 (356)
+...+..+.+.+|+++.|.|.+.+.|.+.+.|+| ++...... .++.... ..+..+|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 3444566789999999999999999999999998 33322222 3343332 34567999999
Q ss_pred CCCCCCeEEEEEEEcCC
Q psy12422 252 VFPEDEGVYVCTATNSL 268 (356)
Q Consensus 252 v~~~d~G~Y~C~a~n~~ 268 (356)
++.+|+|.|.|.|.|..
T Consensus 84 v~~~D~G~Y~C~~~~~~ 100 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSG 100 (246)
T ss_dssp CCGGGCEEEEEEECCSS
T ss_pred CCHHHCEEEEEEEecCC
Confidence 99999999999998764
No 459
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.7e-14 Score=97.36 Aligned_cols=77 Identities=27% Similarity=0.527 Sum_probs=65.2
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|+|+|..+.... ...|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n 78 (96)
T 2ens_A 8 LEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP---------SPVLILPEIGPQDQGTYSCVATH 78 (96)
T ss_dssp CCSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCC---------CSEEEEESCCTTTCEEEECEECC
T ss_pred CCCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCC---------CCEEEECCCCcccCEEEEEEEEe
Confidence 455677777778889999999999999999999999999998876432 23899999999999999999999
Q ss_pred CCCceE
Q psy12422 267 SLGTAE 272 (356)
Q Consensus 267 ~~g~~~ 272 (356)
..+...
T Consensus 79 ~~~~~~ 84 (96)
T 2ens_A 79 SSHGPQ 84 (96)
T ss_dssp SSCCCE
T ss_pred CCCCcE
Confidence 766543
No 460
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=1.8e-13 Score=96.40 Aligned_cols=74 Identities=23% Similarity=0.377 Sum_probs=61.1
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+. .|.+.+.|||+|+.+... ++.+...+....|.|.+++.+|+|.|+|.|.| ....+.|.|.+++
T Consensus 28 G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V~~~p 102 (113)
T 2cpc_A 28 LERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD----ESASFTVTVTEPP 102 (113)
T ss_dssp TCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS----CEEEEEEEEECCC
T ss_pred CCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec----CcEEEEEEEecCC
Confidence 78999999995 889999999999998754 44455555567999999999999999999988 4567788887654
No 461
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.49 E-value=3.3e-13 Score=110.57 Aligned_cols=82 Identities=17% Similarity=0.233 Sum_probs=61.9
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCC-----CCeEEEEEC--CEEcc------------CCCceeEEEeCCEEEEE
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDP-----EPRVSWTKN--GQPLN------------SSNILDLKYKNGVASLQ 248 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p-----~p~i~W~~~--g~~~~------------~~~~~~~~~~~~~~~L~ 248 (356)
..+.+...+..+.+.+|++++|.|.+.+.| .+.+.|+++ +..+. ...++.....++..+|.
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 345555666778899999999999998887 478999984 22110 12345544456677999
Q ss_pred EccCCCCCCeEEEEEEEcCCC
Q psy12422 249 IQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 249 i~~v~~~d~G~Y~C~a~n~~g 269 (356)
|.+++.+|+|.|.|.+.|..+
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~ 114 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVP 114 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSS
T ss_pred ECCCChhHCEEEEEEEecCCC
Confidence 999999999999999998744
No 462
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.49 E-value=2.9e-14 Score=99.13 Aligned_cols=74 Identities=20% Similarity=0.251 Sum_probs=60.6
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.+.|.+ ++|||+|..+... ++.+...+....|.|.+++.+|+|.|+|.|.|. .....+.|.|..
T Consensus 23 G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~--~~~~~~~l~V~~ 97 (106)
T 2dlt_A 23 AEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY--ALSLSAKLNFLE 97 (106)
T ss_dssp SCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS--CCCCCBCEEEEC
T ss_pred CCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC--CceEEEEEEEEE
Confidence 7899999999998888 9999999998654 455556666779999999999999999999998 444555666653
No 463
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.48 E-value=9.6e-15 Score=104.43 Aligned_cols=78 Identities=18% Similarity=0.288 Sum_probs=65.3
Q ss_pred CCceEEEEEeccCCCCe-eEEeeCCEEccc---CCeeEE--ecCC--eEEEEEeeCCCCCC-eEEEEEEEeCCceeEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPT-VKWYKGNRELSK---RDYSMS--YSDG--VVSMEIIDCKPEDS-GEYKCVATNKHGTDETNC 71 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~-v~W~k~g~~l~~---~~~~~~--~~~~--~~~L~i~~~~~~D~-G~Y~C~a~n~~g~~~~~~ 71 (356)
|+++.|.|.+.|.|.|. |+|+|+|..+.. .++.+. ..++ ...|.|.+++.+|+ |.|+|.|.|..|.....+
T Consensus 28 G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~~~ 107 (122)
T 2cry_A 28 GEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEII 107 (122)
T ss_dssp TSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCEEEEEE
T ss_pred CCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCeEEEEE
Confidence 78999999999999997 999999998864 344432 2233 55899999999999 999999999999999988
Q ss_pred EEEEecc
Q psy12422 72 VVIVESE 78 (356)
Q Consensus 72 ~l~v~~~ 78 (356)
.|.|.++
T Consensus 108 ~l~V~~~ 114 (122)
T 2cry_A 108 RLKEQGS 114 (122)
T ss_dssp CCCCSCS
T ss_pred EEEECCC
Confidence 8888764
No 464
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.48 E-value=1.5e-12 Score=110.03 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=33.4
Q ss_pred CeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 39 GVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 39 ~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
+..+|+|.+++.+|+|.|.|.+.+..+.....+.|.|..
T Consensus 252 g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~ 290 (401)
T 3f8u_B 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYK 290 (401)
T ss_dssp EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred CcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeecc
Confidence 567999999999999999999999888777777777753
No 465
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.48 E-value=2.9e-13 Score=92.55 Aligned_cols=79 Identities=25% Similarity=0.411 Sum_probs=63.8
Q ss_pred cCCceeecCCCeEEEEEEEc-CCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEE
Q psy12422 195 KLTDKTIDDGQCLDLSAVVK-GDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAET 273 (356)
Q Consensus 195 ~~~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 273 (356)
.+....+.+|+++.|.|.+. +.|.+.+.|++++........ ....+ .|.|.+++.+|+|.|.|.|.|..|....
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~---~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 90 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRA---MDFNG--ILTIRNVQPSDAGTYVCTGSNMFAMDQG 90 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTE---EEETT--EEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCcee---ecCCC--EEEEeCCChhhCEEEEEEecCCCCcccc
Confidence 34677899999999999998 799999999997544333221 12233 7999999999999999999999999888
Q ss_pred EEEEe
Q psy12422 274 KCKLT 278 (356)
Q Consensus 274 ~~~l~ 278 (356)
.+.|.
T Consensus 91 ~~~l~ 95 (98)
T 1gl4_B 91 TATLH 95 (98)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87775
No 466
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.48 E-value=2.1e-13 Score=97.60 Aligned_cols=79 Identities=19% Similarity=0.311 Sum_probs=62.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEE-c--------ccCCeeEE-ecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRE-L--------SKRDYSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN 70 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~-l--------~~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 70 (356)
|++++|.|.+.+.|.+.+.|++++.. + ...++... ...+..+|+|.+++.+|+|.|+|.+.|. |.....
T Consensus 16 G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~~~~~ 94 (124)
T 3rbg_A 16 GQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD-SVSTKE 94 (124)
T ss_dssp TSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-SEEEEE
T ss_pred CCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-CCCcEE
Confidence 79999999999999999999986543 2 12233332 3445679999999999999999999999 999999
Q ss_pred EEEEEecccc
Q psy12422 71 CVVIVESEEE 80 (356)
Q Consensus 71 ~~l~v~~~~~ 80 (356)
+.|.|..++.
T Consensus 95 ~~l~V~~~P~ 104 (124)
T 3rbg_A 95 VKVIVLATMK 104 (124)
T ss_dssp EEEEEECC--
T ss_pred EEEEEEeCCC
Confidence 9999987643
No 467
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.48 E-value=2.7e-13 Score=95.39 Aligned_cols=74 Identities=23% Similarity=0.392 Sum_probs=62.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.+. |.++|||+|..+..+ ++.+...++...|.|.+++.+|+|.|+|.| +.....+.|.|...+
T Consensus 34 G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V~~~p 107 (113)
T 2edh_A 34 GATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAMP 107 (113)
T ss_dssp TSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEEEECCCC
T ss_pred CCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----CCCCEEEEEEEeCCC
Confidence 7899999999775 689999999998754 555666666778999999999999999999 777888899988764
Q ss_pred c
Q psy12422 80 E 80 (356)
Q Consensus 80 ~ 80 (356)
.
T Consensus 108 ~ 108 (113)
T 2edh_A 108 S 108 (113)
T ss_dssp C
T ss_pred C
Confidence 4
No 468
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=1.8e-13 Score=94.59 Aligned_cols=76 Identities=21% Similarity=0.309 Sum_probs=63.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|++++|.|.+ +.|.+.|+|||++..+... ++.+...++...|+|.+++.+|+|.|+|. .|.....+.|.|.+.+
T Consensus 23 G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V~~~p 97 (103)
T 2dku_A 23 KGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD----IGQAQSRAQLLVQGRR 97 (103)
T ss_dssp TSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----CSSCBCCEEEEEECSC
T ss_pred CCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----eCCceEEEEEEEeCcc
Confidence 7899999995 8999999999999998754 45555566777999999999999999998 5777778889888765
Q ss_pred cc
Q psy12422 80 ES 81 (356)
Q Consensus 80 ~~ 81 (356)
..
T Consensus 98 ~~ 99 (103)
T 2dku_A 98 SG 99 (103)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 469
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.48 E-value=2.3e-13 Score=92.52 Aligned_cols=80 Identities=28% Similarity=0.460 Sum_probs=67.4
Q ss_pred CCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEE
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKC 275 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 275 (356)
+....+.+|+++.|.|.+.+ .|.+.|+++|..+....++.. ..+ .|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 8 p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~--~~~--~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 81 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVL--IGE--YLQIKGATPRDSGLYACTAARTVDSETWIF 81 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEE--ETT--EEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred CCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEE--eCC--EEEECcCCcccCEEEEEEEccCCCcEEEEE
Confidence 45678999999999999986 579999999999877665443 233 899999999999999999999999888888
Q ss_pred EEecCC
Q psy12422 276 KLTPLN 281 (356)
Q Consensus 276 ~l~p~~ 281 (356)
.+.+..
T Consensus 82 ~l~V~~ 87 (95)
T 4hwu_A 82 MVNVTD 87 (95)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 887543
No 470
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.48 E-value=2.7e-13 Score=95.17 Aligned_cols=91 Identities=15% Similarity=0.345 Sum_probs=69.8
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCC--CCCeEEEEECCEEccCCCceeE-EEeC-------CEEEEEEccCCCCC
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGD--PEPRVSWTKNGQPLNSSNILDL-KYKN-------GVASLQIQEVFPED 256 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~--p~p~i~W~~~g~~~~~~~~~~~-~~~~-------~~~~L~i~~v~~~d 256 (356)
..+|.+...+....+.+|+++.|.|.+.+. |.+.+.|++++..+........ .... ....|.|.+++.+|
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 567888888888899999999999999855 4678999999998875432111 1100 13689999999999
Q ss_pred CeEEEEEEEcCCCce-EEEEEE
Q psy12422 257 EGVYVCTATNSLGTA-ETKCKL 277 (356)
Q Consensus 257 ~G~Y~C~a~n~~g~~-~~~~~l 277 (356)
+|.|+|.|.|..|.. ...+.|
T Consensus 88 ~G~Y~C~a~n~~g~~~s~~~~l 109 (112)
T 3so5_A 88 EGXYQCVISNHFGSSYSVXAXL 109 (112)
T ss_dssp CEEEEEEEEETTEEEECCCEEE
T ss_pred CCeEEEEEEeCCCcEEEeEEEE
Confidence 999999999999973 344444
No 471
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.47 E-value=9.7e-14 Score=101.37 Aligned_cols=86 Identities=21% Similarity=0.381 Sum_probs=68.3
Q ss_pred CCCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCC----------CceeEEE---eCCEEEEEEccCC
Q psy12422 187 MTPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSS----------NILDLKY---KNGVASLQIQEVF 253 (356)
Q Consensus 187 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~----------~~~~~~~---~~~~~~L~i~~v~ 253 (356)
..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++..+... .+..... ......|.|.+++
T Consensus 19 ~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 98 (137)
T 3qr2_A 19 SHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLV 98 (137)
T ss_dssp --CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCC
T ss_pred CCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCC
Confidence 67899998899999999999999999999999999999987655422 1222211 1134689999999
Q ss_pred CCCCeEEEEEEEcCCCceE
Q psy12422 254 PEDEGVYVCTATNSLGTAE 272 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~g~~~ 272 (356)
.+|+|.|+|.|.|..|...
T Consensus 99 ~~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 99 EEDTGTYECRASNDPDRNH 117 (137)
T ss_dssp GGGCEEEEEEEECCTTSSS
T ss_pred cccCEEEEEEEEecCCccc
Confidence 9999999999999999763
No 472
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.47 E-value=9.7e-14 Score=95.94 Aligned_cols=75 Identities=27% Similarity=0.456 Sum_probs=62.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|+++.|.|.+.+.|.+ +.|||++..+... ++.+...+...+|.|.+++.+|+|.|+|. .|.....+.|.|.+++
T Consensus 23 G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V~~~p 97 (103)
T 2e7b_A 23 GGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS----FGDQTTSATLTVTALP 97 (103)
T ss_dssp SSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----CSSCBCCBCEEEECCC
T ss_pred CCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----ECCcEEEEEEEEEecc
Confidence 7899999999999999 9999999988644 55566666677899999999999999998 4666677788887654
Q ss_pred c
Q psy12422 80 E 80 (356)
Q Consensus 80 ~ 80 (356)
.
T Consensus 98 ~ 98 (103)
T 2e7b_A 98 S 98 (103)
T ss_dssp C
T ss_pred c
Confidence 3
No 473
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=2e-13 Score=94.20 Aligned_cols=71 Identities=24% Similarity=0.405 Sum_probs=62.8
Q ss_pred CceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCC
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSL 268 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 268 (356)
.+..+.+|+++.|.|.+. .|.+.+.|+|+|..+....++.+...+....|.|.+++.+|+|.|+|.|.|..
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~ 89 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQQ 89 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETTEE
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCCCc
Confidence 456899999999999998 88999999999999988777777777777899999999999999999996543
No 474
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.47 E-value=7.4e-14 Score=98.99 Aligned_cols=78 Identities=24% Similarity=0.396 Sum_probs=57.5
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC-----eeEEecCCe-EEEEE--eeCCCCCCeEEEEEEEeCCceeEEE-E
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD-----YSMSYSDGV-VSMEI--IDCKPEDSGEYKCVATNKHGTDETN-C 71 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-----~~~~~~~~~-~~L~i--~~~~~~D~G~Y~C~a~n~~g~~~~~-~ 71 (356)
|+++.|.|.+.|.|.|.|+|||+|..+.... ......++. ..|.| .+++.+|+|.|+|.|.|..|...+. +
T Consensus 24 G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~~~s~~~ 103 (117)
T 2v9t_A 24 GEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDA 103 (117)
T ss_dssp TCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEEEEEETTEEEECCCE
T ss_pred CCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEEEEEeCccceEeeeE
Confidence 7899999999999999999999999987431 223333442 22222 2668999999999999999988654 6
Q ss_pred EEEEecc
Q psy12422 72 VVIVESE 78 (356)
Q Consensus 72 ~l~v~~~ 78 (356)
.|.+...
T Consensus 104 ~l~~~~~ 110 (117)
T 2v9t_A 104 SLEVAAA 110 (117)
T ss_dssp EEEEC--
T ss_pred EEEhhhh
Confidence 6666543
No 475
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.47 E-value=2e-13 Score=97.53 Aligned_cols=87 Identities=16% Similarity=0.252 Sum_probs=64.5
Q ss_pred CceeecCCCeEEEEEEEcCC--CCCeEEEEECCEEccC-----CCceeEEEe---CCEEEEEEccCCCCCCeEEEEEEEc
Q psy12422 197 TDKTIDDGQCLDLSAVVKGD--PEPRVSWTKNGQPLNS-----SNILDLKYK---NGVASLQIQEVFPEDEGVYVCTATN 266 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~--p~p~i~W~~~g~~~~~-----~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~n 266 (356)
..+.+.+|+++.|.|.+.|. |.+.+.|++++..+.. ......... ...+.|.|.+++.+|+|.|+|.|.|
T Consensus 16 ~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 95 (122)
T 3s35_X 16 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASS 95 (122)
T ss_dssp SCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEcc
Confidence 44578999999999999984 4568999998874421 111111111 1245899999999999999999999
Q ss_pred CCCceEEEEEEecCCCC
Q psy12422 267 SLGTAETKCKLTPLNSS 283 (356)
Q Consensus 267 ~~g~~~~~~~l~p~~~~ 283 (356)
..|.....+.|.+...|
T Consensus 96 ~~g~~~~~~~l~V~~~p 112 (122)
T 3s35_X 96 GLMTKKNSTFVRVHEKP 112 (122)
T ss_dssp SSCEEEEEEEEEEEEEE
T ss_pred CCCceEEEEEEEEeccC
Confidence 99999888888755444
No 476
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.47 E-value=3e-13 Score=106.97 Aligned_cols=133 Identities=12% Similarity=0.238 Sum_probs=82.9
Q ss_pred CCceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EE---c-------------cCCCceeEEEeCCEEEEEEccCCCC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QP---L-------------NSSNILDLKYKNGVASLQIQEVFPE 255 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~---~-------------~~~~~~~~~~~~~~~~L~i~~v~~~ 255 (356)
+....+.+|++++|.|.+.+.+ .+.+.|+|.. .. + ....++......+...|.|.+++.+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTE 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGG
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcc
Confidence 3456789999999999997743 6779999731 11 1 0123444444556678999999999
Q ss_pred CCeEEEEEEEcCCCc------eEEEEEEe--cCCCCcc----------------------------ceeEEeCC------
Q psy12422 256 DEGVYVCTATNSLGT------AETKCKLT--PLNSSNI----------------------------LDLKYKNG------ 293 (356)
Q Consensus 256 d~G~Y~C~a~n~~g~------~~~~~~l~--p~~~~~~----------------------------~~~~~~~~------ 293 (356)
|+|.|.|.+.|..+. ....+.+. +...|.+ ..+.|.++
T Consensus 86 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~ 165 (215)
T 3nl4_H 86 DTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGV 165 (215)
T ss_dssp GCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTE
T ss_pred cCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCe
Confidence 999999999998542 11122222 0011100 03445431
Q ss_pred ---------eEEEEE---ecCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy12422 294 ---------VASLQI---QEVFPEDEGVYVCTATNSLGTAETKCKLTV 329 (356)
Q Consensus 294 ---------~~~L~i---~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 329 (356)
.+.+.+ ..+...| |.|+|.|.|..|.......|.+
T Consensus 166 ~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~~ 212 (215)
T 3nl4_H 166 RTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVAP 212 (215)
T ss_dssp EECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECCS
T ss_pred EecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecCC
Confidence 223444 5577778 9999999999988777666643
No 477
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.46 E-value=6.6e-15 Score=118.13 Aligned_cols=80 Identities=13% Similarity=0.270 Sum_probs=46.6
Q ss_pred CeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECC--EEc------------cCCCceeEEEeCCEEEEEEccCCCC
Q psy12422 190 PQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNG--QPL------------NSSNILDLKYKNGVASLQIQEVFPE 255 (356)
Q Consensus 190 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g--~~~------------~~~~~~~~~~~~~~~~L~i~~v~~~ 255 (356)
+.+...+..+.+.+|+++.|.|.+.+.|.+.+.|+|++ ..+ ....++.....++..+|.|.+++.+
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 103 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSE 103 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CC
T ss_pred eeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHH
Confidence 44455566778999999999999998888889999843 211 0012222222334458999999999
Q ss_pred CCeEEEEEEEcCCC
Q psy12422 256 DEGVYVCTATNSLG 269 (356)
Q Consensus 256 d~G~Y~C~a~n~~g 269 (356)
|+|.|.|.|.|..+
T Consensus 104 D~G~Y~C~~~~~~~ 117 (233)
T 3bqu_C 104 DVADYYCLQSDNLP 117 (233)
T ss_dssp CCSEEEEEECSSSS
T ss_pred HCEEEEEEEecCCc
Confidence 99999999998764
No 478
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=1.9e-13 Score=94.24 Aligned_cols=73 Identities=16% Similarity=0.275 Sum_probs=60.3
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+. .|.+.+.|||+|..+... ++.+...+....|+|.+++.+|+|.|+|.|. .....+.|.|.++
T Consensus 26 G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~----~~~~~~~l~V~~p 99 (102)
T 2eo1_A 26 GASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAG----GQQLSFRLQVAGQ 99 (102)
T ss_dssp TCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEET----TEECCEEEEEESC
T ss_pred CCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcC----CCcEEEEEEEeCC
Confidence 78999999998 889999999999999754 4555555566799999999999999999993 4556678888765
No 479
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.46 E-value=4.4e-13 Score=106.79 Aligned_cols=73 Identities=19% Similarity=0.276 Sum_probs=55.0
Q ss_pred CceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EEcc-----------------CCCceeEEEe--CCEEEEEEccCC
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QPLN-----------------SSNILDLKYK--NGVASLQIQEVF 253 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~~~-----------------~~~~~~~~~~--~~~~~L~i~~v~ 253 (356)
....+.+|++++|.|.+.+.| .+.+.|+|.. ..+. ...++....+ .+..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 346789999999999999887 6789999842 2110 1234444433 346799999999
Q ss_pred CCCCeEEEEEEEcCCC
Q psy12422 254 PEDEGVYVCTATNSLG 269 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~g 269 (356)
.+|+|.|.|.+.|..|
T Consensus 88 ~~D~G~Y~C~~~~~~~ 103 (225)
T 1op3_H 88 VEDTAIYYCARKGSDR 103 (225)
T ss_dssp GGGCEEEEEEEECCSS
T ss_pred hhhCEEEEEEEecCCC
Confidence 9999999999999864
No 480
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.46 E-value=2.3e-13 Score=111.70 Aligned_cols=72 Identities=18% Similarity=0.304 Sum_probs=50.3
Q ss_pred cCCceeecCCCeEEEEEEEcCCCCCeEEEEEC--CEEc------------cCC---C-ceeEEE-eCCEEEEEEccCCCC
Q psy12422 195 KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKN--GQPL------------NSS---N-ILDLKY-KNGVASLQIQEVFPE 255 (356)
Q Consensus 195 ~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~--g~~~------------~~~---~-~~~~~~-~~~~~~L~i~~v~~~ 255 (356)
.+..+.+.+|++++|.|.+.+ +.+.+.|+|. +... ... . ++.... ..+..+|.|.+++.+
T Consensus 33 ~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 111 (270)
T 3qib_D 33 TPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAG 111 (270)
T ss_dssp ECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGG
T ss_pred CCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHh
Confidence 344567889999999999865 7788999982 2110 000 0 222221 234578999999999
Q ss_pred CCeEEEEEEEcC
Q psy12422 256 DEGVYVCTATNS 267 (356)
Q Consensus 256 d~G~Y~C~a~n~ 267 (356)
|+|.|.|.+.+.
T Consensus 112 D~G~Y~C~~~~~ 123 (270)
T 3qib_D 112 DSALYLCASSLN 123 (270)
T ss_dssp GCEEEEEEEESC
T ss_pred HCeEEEEEEecC
Confidence 999999999964
No 481
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.45 E-value=8.1e-14 Score=109.55 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=55.4
Q ss_pred cCCcee-ecCCCeEEEEEEEcCCC---C-CeEEEEECCEEccCCCc-eeEEEeCC----EEEEEEccCCCCCCeEEEEEE
Q psy12422 195 KLTDKT-IDDGQCLDLSAVVKGDP---E-PRVSWTKNGQPLNSSNI-LDLKYKNG----VASLQIQEVFPEDEGVYVCTA 264 (356)
Q Consensus 195 ~~~~~~-v~~g~~~~l~C~~~g~p---~-p~i~W~~~g~~~~~~~~-~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a 264 (356)
.+.... +.+|++++|.|.+.|.| . +.|.|+|++..+..... ......++ ...|.|.+++.+|+|.|+|.|
T Consensus 8 ~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 87 (207)
T 2vol_A 8 PPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRV 87 (207)
T ss_dssp CCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEE
T ss_pred CcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEE
Confidence 344334 88999999999998874 2 48999999977653210 00011111 247999999999999999999
Q ss_pred EcCCCce
Q psy12422 265 TNSLGTA 271 (356)
Q Consensus 265 ~n~~g~~ 271 (356)
.|..+..
T Consensus 88 ~~~~~~~ 94 (207)
T 2vol_A 88 NSAAFPA 94 (207)
T ss_dssp ECTTCSS
T ss_pred EccCCCC
Confidence 9998853
No 482
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=4.5e-14 Score=99.71 Aligned_cols=76 Identities=14% Similarity=0.160 Sum_probs=62.6
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCC-eeEE-ecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEecc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRD-YSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESE 78 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 78 (356)
|+++.|.|.+.|.|.|.++|||||..+..+. +.+. ..++...|.|.+++.+|+|.|+|.+ |.....+.|.|...
T Consensus 28 G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~~~L~V~~~ 103 (115)
T 2cr6_A 28 GSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEK 103 (115)
T ss_dssp TSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TTEECCEEEEEECC
T ss_pred CCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CCeeEEEEEEEECC
Confidence 7899999999999999999999999987553 3333 2355568999999999999999994 67777888998866
Q ss_pred cc
Q psy12422 79 EE 80 (356)
Q Consensus 79 ~~ 80 (356)
+.
T Consensus 104 p~ 105 (115)
T 2cr6_A 104 PS 105 (115)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 483
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.45 E-value=4.9e-14 Score=111.76 Aligned_cols=85 Identities=15% Similarity=0.079 Sum_probs=59.0
Q ss_pred CCCCeecccCCcee--ecCCCeEEEEEEEcCC---CC-CeEEEEECCEEccCCCceeE-EEeC----CEEEEEEccCCCC
Q psy12422 187 MTPPQFANKLTDKT--IDDGQCLDLSAVVKGD---PE-PRVSWTKNGQPLNSSNILDL-KYKN----GVASLQIQEVFPE 255 (356)
Q Consensus 187 ~~~p~~~~~~~~~~--v~~g~~~~l~C~~~g~---p~-p~i~W~~~g~~~~~~~~~~~-~~~~----~~~~L~i~~v~~~ 255 (356)
..+|.+...+.... +.+|++++|.|.+.|. |+ +.|.|+|++..+........ ...+ ..+.|.|.+++.+
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 34455544443333 7899999999999887 44 78999999987754321111 1111 1357999999999
Q ss_pred CCeEEEEEEEcCCCce
Q psy12422 256 DEGVYVCTATNSLGTA 271 (356)
Q Consensus 256 d~G~Y~C~a~n~~g~~ 271 (356)
|+|.|+|.|.|..+..
T Consensus 87 D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPS 102 (218)
T ss_dssp TTCCEEEEEEETTCSS
T ss_pred CCCeEEEEEECCcCCC
Confidence 9999999999987753
No 484
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.45 E-value=1.9e-12 Score=107.30 Aligned_cols=73 Identities=19% Similarity=0.305 Sum_probs=54.1
Q ss_pred CCceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EEcc-----------------CCCceeEEE--eCCEEEEEEccC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QPLN-----------------SSNILDLKY--KNGVASLQIQEV 252 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~~~-----------------~~~~~~~~~--~~~~~~L~i~~v 252 (356)
+....+.+|++++|.|.+.+.| .+.+.|+++. ..+. ...++.... ..+..+|.|.++
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 108 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSL 108 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSC
T ss_pred CCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcC
Confidence 3467899999999999998887 5789999942 1110 012333332 234578999999
Q ss_pred CCCCCeEEEEEEEcCC
Q psy12422 253 FPEDEGVYVCTATNSL 268 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~~ 268 (356)
+.+|+|.|.|.+.|..
T Consensus 109 ~~~DsG~Y~C~~~~~~ 124 (291)
T 2gki_A 109 TSEDSAVYYCARGAYK 124 (291)
T ss_dssp CGGGCEEEEEEEECGG
T ss_pred CHHHCEEEEEEEeccc
Confidence 9999999999999874
No 485
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.44 E-value=2.2e-13 Score=116.47 Aligned_cols=94 Identities=16% Similarity=0.178 Sum_probs=62.4
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEccc-C--CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEec
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSK-R--DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVES 77 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~-~--~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 77 (356)
|+++.|.|.+.| |+|.|+|++++..+.. . ...+...++ +|+|.+++.+|+|.|+|.|.|..|.++..+.|.|..
T Consensus 261 G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~~~~--~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 337 (361)
T 2xot_A 261 GDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSVRNG--DLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVYN 337 (361)
T ss_dssp TCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEEETT--EEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEEES
T ss_pred CCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEeecC--eEEEeecCcccCEEEEEEEecCCCccEEEEEEEEEe
Confidence 789999999999 9999999997765432 1 111222455 799999999999999999999999999999999864
Q ss_pred cccchhhhhhcccccccCccceeeeccc--CCcee
Q psy12422 78 EEESKEQQELAHNFLYSGDRKYIEKHIR--PAPAI 110 (356)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~--p~p~i 110 (356)
.. .+|..+.+.|.+. |.|.|
T Consensus 338 ~~-------------~~g~~~~l~C~~~g~P~P~i 359 (361)
T 2xot_A 338 FT-------------LHGHHDTLNAAADPWSHPQF 359 (361)
T ss_dssp SC-------------CC------------------
T ss_pred ee-------------ccCCceEEEEEeCCCCCCcc
Confidence 31 6788999999987 55554
No 486
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.43 E-value=3.9e-12 Score=101.16 Aligned_cols=72 Identities=18% Similarity=0.347 Sum_probs=53.6
Q ss_pred CceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EE---cc--------------CCCceeEEEe--CCEEEEEEccCC
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QP---LN--------------SSNILDLKYK--NGVASLQIQEVF 253 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~---~~--------------~~~~~~~~~~--~~~~~L~i~~v~ 253 (356)
..+.+.+|++++|.|.+.+.+ .+.+.|+|.. .. +. ...++....+ .+..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 456789999999999998876 4779999842 11 10 1234444433 246789999999
Q ss_pred CCCCeEEEEEEEcCC
Q psy12422 254 PEDEGVYVCTATNSL 268 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~ 268 (356)
.+|+|.|.|.+.|..
T Consensus 88 ~~D~G~Y~C~~~~~~ 102 (223)
T 1dee_B 88 AEDTAVYYCAKVKFY 102 (223)
T ss_dssp GGGCEEEEEEEESSS
T ss_pred HHHCEEEEEEEeccc
Confidence 999999999999875
No 487
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.43 E-value=2.3e-13 Score=111.57 Aligned_cols=68 Identities=15% Similarity=0.160 Sum_probs=49.4
Q ss_pred eeecCCCeEEEEEEEcCC-CCC--eEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCC
Q psy12422 199 KTIDDGQCLDLSAVVKGD-PEP--RVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLG 269 (356)
Q Consensus 199 ~~v~~g~~~~l~C~~~g~-p~p--~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 269 (356)
..+.+|+.++|.|.+.|. |.+ .|+|+|++..+..... .......+|.+...+.+|.+.|+|+|.|..+
T Consensus 96 ~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~---~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~ 166 (291)
T 1mq8_A 96 SWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRRDHHGANFSCRTELDLR 166 (291)
T ss_dssp SBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC---CBTTEEEEEECCCSSSCSSCEEEEEEEEECG
T ss_pred ccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC---CCCCceEEEEeeeeeccCCceEEEEEEecCC
Confidence 458899999999999665 443 5899999977753220 0112234677777777788899999999765
No 488
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.43 E-value=2.5e-12 Score=102.05 Aligned_cols=126 Identities=15% Similarity=0.282 Sum_probs=83.4
Q ss_pred CceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EE---cc--------------CCCceeEEEe--CCEEEEEEccCC
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QP---LN--------------SSNILDLKYK--NGVASLQIQEVF 253 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~---~~--------------~~~~~~~~~~--~~~~~L~i~~v~ 253 (356)
..+.+.+|++++|.|.+.+.| .+.+.|+|.. .. +. ...++....+ .+..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 446899999999999998876 5789999842 11 10 1234444432 346789999999
Q ss_pred CCCCeEEEEEEEcCCCce-----EEEEEEec--CCC---------------------------Cc-cceeEEeCC-----
Q psy12422 254 PEDEGVYVCTATNSLGTA-----ETKCKLTP--LNS---------------------------SN-ILDLKYKNG----- 293 (356)
Q Consensus 254 ~~d~G~Y~C~a~n~~g~~-----~~~~~l~p--~~~---------------------------~~-~~~~~~~~~----- 293 (356)
.+|+|.|.|.+.|..+.. ...+.+.. ... |. ...+.|.++
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~ 167 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDIT 167 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCE
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecc
Confidence 999999999999875421 11222220 000 10 012334321
Q ss_pred ----------------eEEEEEecCCCCCCeEEEEEEEcCCcceE
Q psy12422 294 ----------------VASLQIQEVFPEDEGVYVCTATNSLGTAE 322 (356)
Q Consensus 294 ----------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 322 (356)
.+.|.|..+..+|+|.|+|.|.|..|...
T Consensus 168 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 168 TVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred eEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 12488888888999999999999988755
No 489
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.43 E-value=2.3e-12 Score=104.03 Aligned_cols=75 Identities=21% Similarity=0.363 Sum_probs=56.0
Q ss_pred cccCCceeecCCCeEEEEEEEcCCCCCeEEEEEC--CEEc--------------cCCCceeEEE-eCCEEEEEEccCCCC
Q psy12422 193 ANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKN--GQPL--------------NSSNILDLKY-KNGVASLQIQEVFPE 255 (356)
Q Consensus 193 ~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~--g~~~--------------~~~~~~~~~~-~~~~~~L~i~~v~~~ 255 (356)
...+..+.+.+|++++|.|.+.+.|.+.+.|+|. +... ....++.... ..+..+|.|.+++.+
T Consensus 5 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 84 (245)
T 3nfj_J 5 HQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLS 84 (245)
T ss_dssp EEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGG
T ss_pred eCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChh
Confidence 3445677899999999999999999999999982 1110 0012333322 345678999999999
Q ss_pred CCeEEEEEEEcC
Q psy12422 256 DEGVYVCTATNS 267 (356)
Q Consensus 256 d~G~Y~C~a~n~ 267 (356)
|+|.|.|.+.|.
T Consensus 85 D~G~Y~C~~~~~ 96 (245)
T 3nfj_J 85 DSGFYLCAWSVS 96 (245)
T ss_dssp GCEEEEEEEECC
T ss_pred hCEEEEEEEeec
Confidence 999999999993
No 490
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.43 E-value=8.3e-13 Score=105.44 Aligned_cols=73 Identities=22% Similarity=0.356 Sum_probs=54.6
Q ss_pred CceeecCCCeEEEEEEEcCCCC----CeEEEEEC--CEEcc----------------CCCceeEEEe--CCEEEEEEccC
Q psy12422 197 TDKTIDDGQCLDLSAVVKGDPE----PRVSWTKN--GQPLN----------------SSNILDLKYK--NGVASLQIQEV 252 (356)
Q Consensus 197 ~~~~v~~g~~~~l~C~~~g~p~----p~i~W~~~--g~~~~----------------~~~~~~~~~~--~~~~~L~i~~v 252 (356)
....+.+|++++|.|.+.+.|. +.+.|+|. |..+. ...++....+ .+...|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV 87 (228)
T ss_dssp CCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC
T ss_pred CceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC
Confidence 4567899999999999998885 88999984 22110 1134444332 24579999999
Q ss_pred CCCCCeEEEEEEEcCCC
Q psy12422 253 FPEDEGVYVCTATNSLG 269 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~~g 269 (356)
+.+|+|.|.|.+.|..|
T Consensus 88 ~~~D~G~Y~C~~~~~~g 104 (228)
T 3bae_H 88 DTADTATYYCARRGFYG 104 (228)
T ss_dssp CGGGCEEEEEEEEEEST
T ss_pred CcccCEEEEEEEecCCC
Confidence 99999999999998754
No 491
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.42 E-value=7.8e-13 Score=92.19 Aligned_cols=73 Identities=25% Similarity=0.385 Sum_probs=59.7
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccC-CeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEEEEEEEeccc
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKR-DYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETNCVVIVESEE 79 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 79 (356)
|++++|.|.+.+. |.++|||+|..+..+ ++.+...+....|.|.+++.+|+|.|+|.| ++....+.|.|...+
T Consensus 23 G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~n~~~~~~l~V~~~p 96 (108)
T 2dm7_A 23 GATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMC----GQERTSATLTVRALP 96 (108)
T ss_dssp TSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEE----TTEEEEEECEEECCC
T ss_pred CCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEE----cCCEEEEEEEEecCC
Confidence 7899999999765 689999999988754 455556667778999999999999999999 445677788887643
No 492
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.42 E-value=6.5e-12 Score=117.69 Aligned_cols=78 Identities=13% Similarity=0.264 Sum_probs=61.2
Q ss_pred CCceEEEEEeccCCCCeeE-Ee--eCCEEcccCCeeEE-ecCCeEEEEEeeCCCCCCeEEEEEEEeCCce-eEEEEEEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVK-WY--KGNRELSKRDYSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNKHGT-DETNCVVIV 75 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~-W~--k~g~~l~~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~v 75 (356)
|++++|.|.+.|.|.|.+. |+ +||..+....+... ......+|.|.+++..|+|.|+|.|.|..|. .+..+.|.|
T Consensus 179 G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V 258 (731)
T 2v5y_A 179 GQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV 258 (731)
T ss_dssp TSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEE
Confidence 7899999999999999998 88 78887754322111 1122358999999999999999999999998 666677777
Q ss_pred ecc
Q psy12422 76 ESE 78 (356)
Q Consensus 76 ~~~ 78 (356)
..+
T Consensus 259 ~~~ 261 (731)
T 2v5y_A 259 KEP 261 (731)
T ss_dssp ECC
T ss_pred ecC
Confidence 654
No 493
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.42 E-value=1.2e-12 Score=91.32 Aligned_cols=77 Identities=14% Similarity=0.181 Sum_probs=61.8
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCE-Ecc--------cCCeeEE-ecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNR-ELS--------KRDYSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN 70 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~-~l~--------~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 70 (356)
|++++|.|.+.+.|.+.+.|+|++. .+. ..++... ...+..+|.|.+++.+|+|.|+|.+.| .+..+..
T Consensus 21 G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~~~~~ 99 (108)
T 3m45_A 21 GGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPVKTSK 99 (108)
T ss_dssp TSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSCEEEE
T ss_pred CCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCCcEEE
Confidence 7899999999999999999999875 221 1233332 233567999999999999999999999 8888888
Q ss_pred EEEEEecc
Q psy12422 71 CVVIVESE 78 (356)
Q Consensus 71 ~~l~v~~~ 78 (356)
+.|.|.++
T Consensus 100 ~~L~V~~~ 107 (108)
T 3m45_A 100 AYLTVLGV 107 (108)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99988764
No 494
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.42 E-value=9.1e-13 Score=97.14 Aligned_cols=79 Identities=16% Similarity=0.232 Sum_probs=64.6
Q ss_pred CCceEEEEEeccCCCCeeEEe---------eCCEEcccCCeeEE-ecCCeEEEEEeeCCCCCCeEEEEEEEeCCceeEEE
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWY---------KGNRELSKRDYSMS-YSDGVVSMEIIDCKPEDSGEYKCVATNKHGTDETN 70 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~---------k~g~~l~~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 70 (356)
|++++|.|.+.+.|.+.+.|+ +++..+...++... ...+..+|+|.+++.+|+|.|+|.+.|. |.....
T Consensus 53 G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~~~~~ 131 (145)
T 1z9m_A 53 GGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTAK 131 (145)
T ss_dssp TSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS-SCEEEE
T ss_pred CCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC-CCceEE
Confidence 789999999999998999999 55555544444432 3445679999999999999999999999 888889
Q ss_pred EEEEEecccc
Q psy12422 71 CVVIVESEEE 80 (356)
Q Consensus 71 ~~l~v~~~~~ 80 (356)
+.|.|.+++.
T Consensus 132 ~~L~V~~~P~ 141 (145)
T 1z9m_A 132 SLVTVLGIPQ 141 (145)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEeCCC
Confidence 9999987654
No 495
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.42 E-value=6.8e-12 Score=97.22 Aligned_cols=74 Identities=16% Similarity=0.262 Sum_probs=60.0
Q ss_pred eeecCCCeEEEEEEEcCCCCC--eEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcCCCceEEEEE
Q psy12422 199 KTIDDGQCLDLSAVVKGDPEP--RVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNSLGTAETKCK 276 (356)
Q Consensus 199 ~~v~~g~~~~l~C~~~g~p~p--~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 276 (356)
+.+..|++++|.|.+ +.|.| .|.|++.+..+ .+ .....+...|.|.+++.+|.|.|.|.|.|..+.....+.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~--~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 90 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GA--VQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQ 90 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CC--EEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---Cc--EEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEE
Confidence 689999999999999 88888 99999955433 22 222456679999999999999999999999887766666
Q ss_pred Ee
Q psy12422 277 LT 278 (356)
Q Consensus 277 l~ 278 (356)
|.
T Consensus 91 lt 92 (210)
T 1gsm_A 91 LL 92 (210)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 496
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=8.8e-14 Score=94.76 Aligned_cols=68 Identities=21% Similarity=0.345 Sum_probs=55.2
Q ss_pred CCceEEEEEeccCCCCeeEEeeCCEEcccCCeeEEecCCeEEEEEeeCCCCCCeEEEEEEEeCCcee--EEEEEEEEe
Q psy12422 1 MQNVIKVKVGSTKPPPTVKWYKGNRELSKRDYSMSYSDGVVSMEIIDCKPEDSGEYKCVATNKHGTD--ETNCVVIVE 76 (356)
Q Consensus 1 g~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~--~~~~~l~v~ 76 (356)
|+++.|.|.+.|.|.|.|.|||+|..+.... ...|.|.+++.+|+|.|+|.|.|..+.. +..+.|.|.
T Consensus 25 G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~--------~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 25 GGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP--------SPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVSISII 94 (96)
T ss_dssp TCEEEEECCCSSCSSCCCCCEESSSBCSSCC--------CSEEEEESCCTTTCEEEECEECCSSCCCEECCCEEEEEC
T ss_pred CCeEEEEEEEccCCCCEEEEEECCEECcCCC--------CCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEEEEEEe
Confidence 7899999999999999999999998876432 1289999999999999999999965543 334555554
No 497
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.41 E-value=1.8e-12 Score=92.73 Aligned_cols=88 Identities=20% Similarity=0.319 Sum_probs=67.8
Q ss_pred cCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEE-cc-------CCCceeEE-EeCCEEEEEEccCCCCCCeEEEEEEE
Q psy12422 195 KLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQP-LN-------SSNILDLK-YKNGVASLQIQEVFPEDEGVYVCTAT 265 (356)
Q Consensus 195 ~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~-~~-------~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~ 265 (356)
.+..+.+.+|++++|.|.+.+.|.+.+.|++++.. +. ...++... ......+|.|.+++.+|+|.|.|.|.
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 86 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHY 86 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEE
Confidence 34567899999999999999999999999985433 21 22333332 24456799999999999999999999
Q ss_pred cCCCceEEEEEEecCCCC
Q psy12422 266 NSLGTAETKCKLTPLNSS 283 (356)
Q Consensus 266 n~~g~~~~~~~l~p~~~~ 283 (356)
|. |.....+.|.+...|
T Consensus 87 n~-g~~~~~~~l~V~~~P 103 (124)
T 3rbg_A 87 SD-SVSTKEVKVIVLATM 103 (124)
T ss_dssp SS-SEEEEEEEEEEECC-
T ss_pred cC-CCCcEEEEEEEEeCC
Confidence 99 888888888755444
No 498
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.41 E-value=1.8e-12 Score=116.90 Aligned_cols=92 Identities=28% Similarity=0.408 Sum_probs=85.0
Q ss_pred CCCeecccCCceeecCCCeEEEEEEEcCCCCCeEEEEECCEEccCCCceeEEEeCCEEEEEEccCCCCCCeEEEEEEEcC
Q psy12422 188 TPPQFANKLTDKTIDDGQCLDLSAVVKGDPEPRVSWTKNGQPLNSSNILDLKYKNGVASLQIQEVFPEDEGVYVCTATNS 267 (356)
Q Consensus 188 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 267 (356)
..|.+...+.+..+.+|+++.|.|.+.|.|.|.++|++++..+..+.++.+..++...+|.|.++.++|+|.|+|+|.|.
T Consensus 481 ~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~ 560 (573)
T 3uto_A 481 AQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNS 560 (573)
T ss_dssp GSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeC
Confidence 45667777778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEec
Q psy12422 268 LGTAETKCKLTP 279 (356)
Q Consensus 268 ~g~~~~~~~l~p 279 (356)
.|..+..+.|++
T Consensus 561 ~G~~~~~v~l~V 572 (573)
T 3uto_A 561 YGTKEEIVFLNV 572 (573)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 999999888763
No 499
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.40 E-value=1.6e-12 Score=91.24 Aligned_cols=75 Identities=16% Similarity=0.337 Sum_probs=57.9
Q ss_pred CCceEEEEEeccC--CCCeeEEeeCCEEcccCCee--EEecC-------CeEEEEEeeCCCCCCeEEEEEEEeCCcee-E
Q psy12422 1 MQNVIKVKVGSTK--PPPTVKWYKGNRELSKRDYS--MSYSD-------GVVSMEIIDCKPEDSGEYKCVATNKHGTD-E 68 (356)
Q Consensus 1 g~~v~l~C~~~g~--p~~~v~W~k~g~~l~~~~~~--~~~~~-------~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~-~ 68 (356)
|++++|.|.+.+. |.+.+.|+|+|..+...... ..... ...+|.|.+++.+|+|.|+|.|.|..|.. +
T Consensus 25 G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s 104 (112)
T 3so5_A 25 GSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYS 104 (112)
T ss_dssp TCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeCCCcEEE
Confidence 7899999999854 46899999999998754311 11111 13589999999999999999999999984 4
Q ss_pred EEEEEEE
Q psy12422 69 TNCVVIV 75 (356)
Q Consensus 69 ~~~~l~v 75 (356)
..+.|.|
T Consensus 105 ~~~~l~V 111 (112)
T 3so5_A 105 VXAXLTI 111 (112)
T ss_dssp CCEEEEE
T ss_pred eEEEEEe
Confidence 6677765
No 500
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.40 E-value=3.2e-12 Score=104.00 Aligned_cols=73 Identities=18% Similarity=0.343 Sum_probs=54.7
Q ss_pred CCceeecCCCeEEEEEEEcCCC--CCeEEEEECC--EEcc-----------------CCCceeEEEe--CCEEEEEEccC
Q psy12422 196 LTDKTIDDGQCLDLSAVVKGDP--EPRVSWTKNG--QPLN-----------------SSNILDLKYK--NGVASLQIQEV 252 (356)
Q Consensus 196 ~~~~~v~~g~~~~l~C~~~g~p--~p~i~W~~~g--~~~~-----------------~~~~~~~~~~--~~~~~L~i~~v 252 (356)
+....+.+|++++|.|.+.+.| .+.+.|+|+. ..+. ...++....+ .+...|.|.++
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 92 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSL 92 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCC
Confidence 4566899999999999999887 6789999852 2110 0123433332 34678999999
Q ss_pred CCCCCeEEEEEEEcCC
Q psy12422 253 FPEDEGVYVCTATNSL 268 (356)
Q Consensus 253 ~~~d~G~Y~C~a~n~~ 268 (356)
+.+|+|.|.|.+.|..
T Consensus 93 ~~~DsG~Y~C~~~~~~ 108 (261)
T 2xqy_G 93 TSEDSAVYYCGRLGYV 108 (261)
T ss_dssp CGGGCEEEEEEEECTT
T ss_pred CcccCeEEEEEEecCC
Confidence 9999999999999964
Done!