Query psy12425
Match_columns 591
No_of_seqs 367 out of 2112
Neff 12.3
Searched_HMMs 29240
Date Fri Aug 16 18:59:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12425.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12425hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 1.5E-53 5.2E-58 423.7 51.6 543 2-566 12-563 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 4.2E-47 1.4E-51 377.5 49.9 455 3-479 109-569 (570)
3 1e07_A Carcinoembryonic antige 100.0 5E-43 1.7E-47 355.0 49.7 505 5-568 121-635 (642)
4 3dmk_A DOWN syndrome cell adhe 100.0 1.1E-43 3.6E-48 370.2 41.1 518 4-563 48-606 (816)
5 1e07_A Carcinoembryonic antige 100.0 1.9E-41 6.4E-46 343.5 53.2 516 2-564 6-547 (642)
6 3dmk_A DOWN syndrome cell adhe 100.0 7.8E-43 2.7E-47 363.6 37.9 523 3-566 256-802 (816)
7 2ocw_A Polymeric-immunoglobuli 100.0 2.4E-40 8.3E-45 331.9 46.8 458 2-482 7-548 (585)
8 2nzi_A Titin; IG-domain, FNIII 100.0 7.8E-40 2.7E-44 299.8 33.1 294 290-583 2-300 (305)
9 2ec8_A MAST/stem cell growth f 100.0 2.6E-41 8.9E-46 333.7 24.6 442 3-486 44-516 (524)
10 3kld_A Contactin 4, axcam, BIG 100.0 2E-39 6.8E-44 306.1 32.7 361 2-479 12-382 (384)
11 2jll_A NCAM2, neural cell adhe 100.0 3.1E-38 1.1E-42 300.0 40.5 359 2-576 7-386 (389)
12 3qs9_E FL cytokine receptor; i 100.0 2.4E-39 8.1E-44 314.9 30.0 437 2-480 55-510 (527)
13 3laf_A Deleted in colorectal c 100.0 9.7E-38 3.3E-42 298.2 34.2 367 2-482 28-403 (403)
14 3p3y_A Neurofascin; IG domains 100.0 3.9E-38 1.3E-42 301.2 28.4 367 2-480 24-403 (404)
15 2jll_A NCAM2, neural cell adhe 100.0 6.6E-37 2.2E-41 290.9 35.7 286 293-583 2-297 (389)
16 3l5h_A Interleukin-6 receptor 100.0 1.1E-39 3.9E-44 326.9 16.6 547 1-571 9-585 (589)
17 1bih_A Hemolin; insect immunit 100.0 7.7E-38 2.6E-42 298.0 28.2 369 2-478 13-394 (395)
18 1cs6_A Axonin-1; neural cell a 100.0 1.8E-37 6.2E-42 293.8 30.4 361 2-479 11-381 (382)
19 3qs7_E FL cytokine receptor; i 100.0 1.4E-37 4.7E-42 294.6 29.3 361 2-488 55-422 (423)
20 2v5m_A Dscam; neurobiology SPL 100.0 1.4E-36 4.7E-41 288.5 32.6 359 3-478 12-387 (388)
21 3v2a_R Vascular endothelial gr 100.0 8E-40 2.7E-44 339.9 11.2 460 4-487 233-763 (772)
22 2rcj_C Light chain; immunoglob 100.0 3.6E-36 1.2E-40 296.9 34.5 452 2-469 7-513 (523)
23 1z7z_I Intercellular adhesion 100.0 6.1E-37 2.1E-41 296.7 28.3 424 2-480 6-449 (450)
24 2v5y_A Receptor-type tyrosine- 100.0 9.2E-36 3.2E-40 304.8 36.3 472 2-574 171-702 (731)
25 2rik_A Titin; I-SET IG fold, p 100.0 7.4E-34 2.5E-38 257.1 39.3 272 2-479 12-283 (284)
26 3v2a_R Vascular endothelial gr 100.0 1.9E-37 6.4E-42 322.1 12.8 539 2-569 133-752 (772)
27 2ec8_A MAST/stem cell growth f 100.0 9.4E-34 3.2E-38 279.7 31.7 383 70-482 18-413 (524)
28 1wio_A CD4, T-cell surface gly 100.0 6.7E-33 2.3E-37 259.9 20.3 316 3-478 2-361 (363)
29 1qgc_4 Protein (immunoglobulin 100.0 1.2E-31 4.1E-36 258.9 29.5 369 2-476 8-435 (438)
30 2y25_A Myomesin; structural pr 100.0 1.2E-31 4E-36 247.1 22.2 169 310-480 125-315 (317)
31 2ocw_A Polymeric-immunoglobuli 100.0 9.5E-29 3.2E-33 247.8 44.2 396 146-566 75-538 (585)
32 2yd9_A Receptor-type tyrosine- 100.0 1E-30 3.4E-35 238.8 26.9 272 2-483 13-294 (304)
33 2v5y_A Receptor-type tyrosine- 100.0 2.1E-29 7E-34 257.9 39.5 461 9-585 90-572 (731)
34 3qs9_E FL cytokine receptor; i 100.0 5.5E-31 1.9E-35 256.1 25.5 350 97-482 57-416 (527)
35 2rik_A Titin; I-SET IG fold, p 100.0 4.7E-29 1.6E-33 225.6 34.7 268 291-564 4-275 (284)
36 1zlg_A Anosmin 1; insulin-like 100.0 5.8E-28 2E-32 243.1 44.8 444 60-583 132-638 (680)
37 2wim_A N-CAM 2, NCAM2, neural 100.0 2.6E-29 9E-34 228.2 29.5 173 304-482 110-286 (291)
38 2y23_A Myomesin; structural pr 100.0 6E-29 2.1E-33 228.4 28.2 170 302-479 117-311 (312)
39 2rcj_C Light chain; immunoglob 100.0 4.3E-27 1.5E-31 232.1 38.4 326 144-477 68-417 (523)
40 1igt_B IGG2A intact antibody - 100.0 1.4E-28 4.7E-33 237.2 23.6 367 2-469 7-434 (444)
41 3laf_A Deleted in colorectal c 100.0 3.3E-28 1.1E-32 232.2 25.5 345 198-565 31-393 (403)
42 1i1r_A GP130, interleukin-6 re 100.0 8.1E-28 2.8E-32 218.6 26.2 275 1-285 10-298 (303)
43 1ry7_B FGFR-3, fibroblast grow 100.0 2.7E-29 9.3E-34 232.9 15.4 182 303-484 134-331 (334)
44 1iga_A IGA1; immunoglobulin; N 100.0 3.6E-26 1.2E-30 222.0 36.0 367 2-469 8-443 (475)
45 1qz1_A Neural cell adhesion mo 100.0 4.1E-27 1.4E-31 213.8 26.3 271 199-480 13-290 (291)
46 3qs7_E FL cytokine receptor; i 100.0 1.6E-27 5.4E-32 225.8 23.8 327 197-565 57-406 (423)
47 1hzh_H IGG, immunoglobulin hea 100.0 3.7E-27 1.3E-31 228.1 26.9 367 2-470 7-444 (457)
48 2nzi_A Titin; IG-domain, FNIII 100.0 6.5E-27 2.2E-31 213.9 26.3 272 2-285 11-292 (305)
49 3t1w_A Four-domain fibronectin 100.0 4.5E-25 1.5E-29 207.8 38.2 353 90-567 4-361 (375)
50 1z7z_I Intercellular adhesion 100.0 3E-27 1E-31 228.8 22.7 368 146-564 50-440 (450)
51 1itb_B Type 1 interleukin-1 re 100.0 3.9E-28 1.3E-32 223.0 15.5 172 304-480 115-314 (315)
52 1bih_A Hemolin; insect immunit 100.0 5E-27 1.7E-31 223.4 23.7 348 197-564 15-387 (395)
53 1fnf_A Fibronectin; RGD, extra 100.0 7.5E-25 2.6E-29 205.8 37.6 352 89-568 2-360 (368)
54 3kld_A Contactin 4, axcam, BIG 100.0 2.6E-27 8.9E-32 223.3 20.8 296 247-566 62-376 (384)
55 2d9q_B Granulocyte colony-stim 100.0 1.6E-26 5.4E-31 211.0 24.2 276 2-285 7-304 (313)
56 4dep_C Interleukin-1 receptor 100.0 3.6E-27 1.2E-31 220.0 20.2 170 306-480 134-333 (349)
57 3p3y_A Neurofascin; IG domains 100.0 3.1E-27 1E-31 225.7 18.9 299 246-565 72-395 (404)
58 2v5m_A Dscam; neurobiology SPL 100.0 5E-27 1.7E-31 222.7 20.1 293 245-565 57-381 (388)
59 1qz1_A Neural cell adhesion mo 99.9 4.3E-26 1.5E-30 207.0 25.3 273 2-384 9-290 (291)
60 1wio_A CD4, T-cell surface gly 99.9 2.1E-26 7.1E-31 215.8 23.7 261 246-560 66-351 (363)
61 2o26_X MAST/stem cell growth f 99.9 1E-25 3.5E-30 204.1 26.7 255 196-482 20-290 (290)
62 1igy_B IGG1 intact antibody MA 99.9 2.5E-28 8.5E-33 234.6 9.6 366 2-469 6-424 (434)
63 3o4o_C Interleukin-1 receptor 99.9 3.4E-27 1.2E-31 219.2 15.7 169 306-479 134-334 (339)
64 1cs6_A Axonin-1; neural cell a 99.9 1.3E-26 4.3E-31 219.3 20.0 295 246-565 60-374 (382)
65 3lcy_A Titin; A-BAND, IG tande 99.9 1.6E-25 5.6E-30 190.3 22.1 191 290-480 5-196 (197)
66 2o26_X MAST/stem cell growth f 99.9 2.8E-25 9.5E-30 201.3 24.6 263 2-386 19-290 (290)
67 2wim_A N-CAM 2, NCAM2, neural 99.9 8.4E-25 2.9E-29 198.5 27.5 264 291-567 3-278 (291)
68 2j8h_A Titin, connectin; cardi 99.9 3.8E-25 1.3E-29 187.8 22.8 190 290-479 2-196 (197)
69 4fom_A Poliovirus receptor-rel 99.9 1.1E-26 3.7E-31 212.6 13.6 226 246-483 73-303 (308)
70 3ejj_X Macrophage colony-stimu 99.9 8.5E-25 2.9E-29 198.2 26.0 262 196-482 12-283 (289)
71 2a38_A Titin; Z1Z2, structural 99.9 4.2E-25 1.4E-29 187.1 22.2 186 291-479 4-194 (194)
72 1qgc_4 Protein (immunoglobulin 99.9 9.1E-25 3.1E-29 210.7 27.4 306 246-563 74-429 (438)
73 1i1r_A GP130, interleukin-6 re 99.9 2.4E-24 8.2E-29 195.7 28.5 254 297-571 9-294 (303)
74 2yd9_A Receptor-type tyrosine- 99.9 2.9E-25 9.9E-30 202.6 21.8 263 290-565 4-283 (304)
75 2oz4_A Intercellular adhesion 99.9 8.3E-25 2.8E-29 194.9 24.0 151 304-480 110-264 (265)
76 3rjd_A High affinity immunoglo 99.9 1.8E-24 6.2E-29 193.0 25.8 155 304-478 94-260 (262)
77 3mtr_A N-CAM-1, NCAM-1, neural 99.9 7.7E-25 2.6E-29 188.3 21.9 176 398-575 28-210 (215)
78 2q7n_A Leukemia inhibitory fac 99.9 1.2E-22 4E-27 192.0 38.4 440 96-571 10-482 (488)
79 1zvo_C Myeloma immunoglobulin 99.9 2.7E-23 9.2E-28 202.7 35.1 173 292-471 296-494 (512)
80 4fqp_A Poliovirus receptor; im 99.9 4.2E-24 1.5E-28 195.6 27.1 275 2-387 7-307 (313)
81 2y25_A Myomesin; structural pr 99.9 2.6E-25 9E-30 204.6 18.5 265 290-564 5-306 (317)
82 3oq3_B IFN-alpha/beta binding 99.9 8.7E-25 3E-29 201.4 21.3 222 246-478 88-328 (329)
83 2d9q_B Granulocyte colony-stim 99.9 3.1E-24 1.1E-28 195.8 23.5 262 300-580 8-311 (313)
84 4fqp_A Poliovirus receptor; im 99.9 9.4E-25 3.2E-29 200.0 19.2 222 246-482 78-306 (313)
85 3mtr_A N-CAM-1, NCAM-1, neural 99.9 1.3E-23 4.6E-28 180.6 23.6 176 2-179 25-206 (215)
86 2yd1_A Tyrosine-protein phosph 99.9 9.5E-24 3.2E-28 181.2 22.5 190 290-486 4-206 (212)
87 4fom_A Poliovirus receptor-rel 99.9 7.4E-25 2.5E-29 200.4 16.4 277 1-387 5-303 (308)
88 2yd6_A PTPRD protein; hydrolas 99.9 8.8E-24 3E-28 181.3 21.8 189 291-482 5-206 (212)
89 3rbs_A Myomesin-1; immunoglobu 99.9 5.8E-24 2E-28 180.0 19.2 178 292-478 3-205 (207)
90 1n26_A IL-6 receptor alpha cha 99.9 6.8E-23 2.3E-27 187.6 27.6 267 5-285 16-294 (325)
91 3ejj_X Macrophage colony-stimu 99.9 1.7E-23 5.7E-28 189.7 23.1 269 2-386 11-283 (289)
92 2y23_A Myomesin; structural pr 99.9 1.1E-23 3.8E-28 193.3 21.6 258 302-564 11-303 (312)
93 2wv3_A Neuroplastin; igcam, me 99.9 4.4E-23 1.5E-27 173.6 23.0 178 292-479 3-189 (190)
94 4fa8_A Secreted protein BARF1; 99.9 3E-24 1E-28 180.4 15.2 169 301-472 2-194 (203)
95 3vh8_G Killer cell immunoglobu 99.9 1.5E-23 5E-28 192.2 21.1 265 199-482 34-315 (316)
96 1n26_A IL-6 receptor alpha cha 99.9 1E-22 3.5E-27 186.5 26.1 266 294-573 8-292 (325)
97 3rjd_A High affinity immunoglo 99.9 1.1E-22 3.9E-27 181.3 25.8 244 292-563 1-249 (262)
98 3mjg_X Beta-type platelet-deri 99.9 1.1E-22 3.7E-27 184.2 25.7 129 256-389 150-283 (289)
99 2wng_A Tyrosine-protein phosph 99.9 1.5E-23 5.1E-28 193.4 19.7 274 2-375 10-310 (327)
100 3mjg_X Beta-type platelet-deri 99.9 2.2E-23 7.4E-28 188.8 20.2 264 196-485 8-283 (289)
101 4dkd_C Macrophage colony-stimu 99.9 8.4E-24 2.9E-28 192.0 17.4 261 199-485 15-286 (292)
102 2va4_A NCAM2, N-CAM 2, neural 99.9 8.4E-23 2.9E-27 172.6 22.0 182 292-479 2-192 (192)
103 1ry7_B FGFR-3, fibroblast grow 99.9 7.5E-25 2.6E-29 203.0 10.1 258 299-565 15-319 (334)
104 3u83_A Poliovirus receptor-rel 99.9 5.2E-23 1.8E-27 190.4 22.3 224 245-486 90-326 (331)
105 2iep_A Muscle-specific kinase 99.9 9.5E-24 3.2E-28 178.4 15.6 185 290-482 5-192 (192)
106 2wng_A Tyrosine-protein phosph 99.9 5.1E-23 1.7E-27 189.8 20.2 217 245-470 72-309 (327)
107 2c5d_C AXL oncogene, tyrosine- 99.9 8.5E-23 2.9E-27 172.8 19.9 177 292-478 2-191 (195)
108 2a38_A Titin; Z1Z2, structural 99.9 2.8E-22 9.7E-27 169.6 22.8 180 2-382 12-193 (194)
109 3u83_A Poliovirus receptor-rel 99.9 1.2E-22 4.2E-27 187.9 22.3 278 1-387 20-323 (331)
110 2v44_A NCAM2, neural cell adhe 99.9 2.5E-22 8.5E-27 169.0 21.8 176 295-477 5-184 (189)
111 2r15_A Myomesin-1; sarcomeric 99.9 3.3E-22 1.1E-26 171.9 21.4 174 305-480 15-210 (212)
112 1epf_A NCAM, protein (neural c 99.9 4.6E-22 1.6E-26 167.7 21.0 181 292-478 2-189 (191)
113 3o4o_C Interleukin-1 receptor 99.9 2.4E-23 8.2E-28 193.2 14.3 270 291-566 17-328 (339)
114 1rhf_A Tyrosine-protein kinase 99.9 3.2E-22 1.1E-26 167.2 19.7 175 292-478 2-181 (182)
115 4dep_C Interleukin-1 receptor 99.9 3.2E-22 1.1E-26 186.5 21.3 263 299-567 14-327 (349)
116 2dtg_E Insulin receptor; IR ec 99.9 7.5E-24 2.6E-28 219.1 11.2 373 96-573 475-886 (897)
117 1igt_B IGG2A intact antibody - 99.9 2.1E-22 7.2E-27 194.1 20.5 307 246-561 78-433 (444)
118 1za6_B IGG heavy chain; immuno 99.9 4.4E-22 1.5E-26 184.5 21.9 162 304-469 132-330 (344)
119 3oq3_B IFN-alpha/beta binding 99.9 3.8E-22 1.3E-26 183.8 20.5 250 300-564 37-321 (329)
120 2v5t_A NCAM2, N-CAM 2, neural 99.9 3.5E-22 1.2E-26 168.3 18.6 182 292-479 2-187 (189)
121 1zlg_A Anosmin 1; insulin-like 99.9 8.6E-20 3E-24 183.8 38.9 220 50-274 222-489 (680)
122 3grw_A Fibroblast growth facto 99.9 1.7E-22 6E-27 177.5 16.4 197 291-487 10-225 (241)
123 1tdq_A Tenascin-R; extracellul 99.9 1.1E-20 3.8E-25 170.1 28.3 171 83-270 9-183 (283)
124 3l5h_A Interleukin-6 receptor 99.9 1.7E-21 5.8E-26 195.2 25.1 446 8-477 102-584 (589)
125 3r8q_A Fibronectin; heparin, F 99.9 1.5E-20 5E-25 169.8 28.6 262 88-566 20-284 (290)
126 3ojm_B Fibroblast growth facto 99.9 1.7E-22 5.9E-27 176.4 15.1 197 291-487 14-228 (231)
127 3sgj_C Human FCG3A receptor; r 99.9 3E-22 1E-26 169.5 15.9 173 291-487 6-181 (204)
128 3vh8_G Killer cell immunoglobu 99.9 2.3E-21 7.9E-26 177.6 22.8 261 291-570 23-308 (316)
129 2yd1_A Tyrosine-protein phosph 99.9 1.2E-20 4.1E-25 161.8 25.1 85 2-86 13-101 (212)
130 1hzh_H IGG, immunoglobulin hea 99.9 1.4E-20 4.8E-25 181.9 28.3 227 246-477 78-347 (457)
131 1itb_B Type 1 interleukin-1 re 99.9 7.7E-23 2.6E-27 187.7 11.6 255 301-564 14-305 (315)
132 1f97_A Junction adhesion molec 99.9 8.5E-22 2.9E-26 169.4 17.0 180 294-480 3-207 (212)
133 2j8h_A Titin, connectin; cardi 99.9 5.6E-21 1.9E-25 162.0 21.2 183 2-383 11-196 (197)
134 4dkd_C Macrophage colony-stimu 99.9 1.4E-21 4.7E-26 177.3 17.4 254 291-565 3-273 (292)
135 1iga_A IGA1; immunoglobulin; N 99.9 1.2E-19 3.9E-24 176.3 31.9 308 246-562 79-443 (475)
136 2yd6_A PTPRD protein; hydrolas 99.9 5.6E-20 1.9E-24 157.5 26.1 189 2-387 13-207 (212)
137 2vr9_A Roundabout 1, ROBO; imm 99.9 3.4E-21 1.2E-25 166.1 18.2 186 290-481 7-207 (217)
138 3bp6_B Programmed cell death 1 99.9 5.7E-21 1.9E-25 162.5 18.9 176 300-481 10-194 (202)
139 2ifg_A High affinity nerve gro 99.9 8.6E-22 3E-26 182.5 14.3 184 290-482 156-347 (347)
140 2wv3_A Neuroplastin; igcam, me 99.9 4.7E-20 1.6E-24 155.1 23.6 80 304-383 104-189 (190)
141 3k0w_A Mucosa-associated lymph 99.9 8.5E-21 2.9E-25 163.3 19.4 171 290-481 16-203 (218)
142 2q7n_A Leukemia inhibitory fac 99.9 1E-20 3.5E-25 178.8 21.4 264 2-282 210-480 (488)
143 2v9r_A Roundabout homolog 1; p 99.9 2.2E-21 7.4E-26 166.8 15.0 189 290-484 7-206 (212)
144 2oz4_A Intercellular adhesion 99.9 7.2E-21 2.5E-25 169.4 18.7 237 290-564 4-255 (265)
145 3p2t_A Leukocyte immunoglobuli 99.9 1.2E-20 4.1E-25 159.4 17.6 170 291-468 4-179 (196)
146 3lcy_A Titin; A-BAND, IG tande 99.9 5E-20 1.7E-24 156.2 21.3 182 2-384 14-196 (197)
147 2c1o_A IGK-C protein; FAB frag 99.9 8E-21 2.7E-25 168.0 16.5 203 254-470 11-245 (254)
148 2d3v_A Leukocyte immunoglobuli 99.9 7.3E-21 2.5E-25 160.6 15.4 170 291-468 4-180 (196)
149 1vca_A VCAM-D1,2, human vascul 99.9 4.3E-20 1.5E-24 155.9 19.9 174 304-483 13-200 (202)
150 1fnl_A Low affinity immunoglob 99.9 1.7E-20 5.7E-25 155.1 16.7 167 290-480 5-174 (175)
151 2v44_A NCAM2, neural cell adhe 99.9 7.3E-20 2.5E-24 153.8 20.9 75 2-77 9-84 (189)
152 2c5d_C AXL oncogene, tyrosine- 99.9 1.2E-19 4.1E-24 153.4 22.2 75 2-76 9-93 (195)
153 3jz7_A MCAR, CAR, coxsackievir 99.9 3.8E-21 1.3E-25 165.6 13.0 176 300-482 8-214 (214)
154 2x1w_L Vascular endothelial gr 99.9 8.6E-21 2.9E-25 162.4 14.9 178 299-482 14-209 (213)
155 3b5h_A Cervical EMMPRIN, HAB18 99.9 5.5E-20 1.9E-24 153.8 19.3 166 302-480 8-183 (184)
156 1nbq_A JAM, junctional adhesio 99.9 3.7E-21 1.3E-25 165.0 12.2 180 292-478 4-207 (209)
157 3r4d_A CEA-related cell adhesi 99.9 2.4E-20 8.1E-25 159.7 17.1 173 300-483 7-203 (208)
158 1f2q_A High affinity immunoglo 99.8 1E-20 3.4E-25 156.7 13.6 169 291-483 3-174 (176)
159 1igy_B IGG1 intact antibody MA 99.8 1.4E-21 4.8E-26 187.6 9.4 305 246-562 77-424 (434)
160 3s97_C Contactin-1; carbonic a 99.8 1.2E-20 4.2E-25 160.6 14.0 176 297-479 13-200 (201)
161 4fa8_A Secreted protein BARF1; 99.8 3E-20 1E-24 156.0 15.4 83 3-85 1-103 (203)
162 3se4_A Interferon alpha/beta r 99.8 1.9E-19 6.7E-24 170.5 22.3 374 92-576 11-410 (414)
163 1ugn_A LIR1, leukocyte immunog 99.8 2.1E-20 7.3E-25 158.1 13.6 170 291-468 4-181 (198)
164 1fnf_A Fibronectin; RGD, extra 99.8 3.7E-17 1.3E-21 153.3 37.1 302 46-376 53-357 (368)
165 3t1w_A Four-domain fibronectin 99.8 2.3E-17 7.9E-22 155.1 35.7 302 46-376 54-359 (375)
166 3rbs_A Myomesin-1; immunoglobu 99.8 3.7E-19 1.3E-23 150.5 20.1 70 3-72 10-82 (207)
167 3ry4_A Low affinity immunoglob 99.8 1.8E-19 6E-24 148.5 17.6 164 291-478 3-169 (170)
168 3lpw_A A77-A78 domain from tit 99.8 1E-18 3.6E-23 147.9 22.8 192 86-283 3-194 (197)
169 1uct_A Immunoglobulin alpha FC 99.8 8E-20 2.7E-24 156.1 15.5 181 291-482 8-200 (218)
170 2va4_A NCAM2, N-CAM 2, neural 99.8 6.7E-19 2.3E-23 148.5 21.0 78 3-82 12-89 (192)
171 4f80_A Butyrophilin subfamily 99.8 6.4E-19 2.2E-23 152.6 21.1 177 300-481 12-214 (226)
172 2r15_A Myomesin-1; sarcomeric 99.8 3.5E-19 1.2E-23 152.9 19.0 84 301-384 126-210 (212)
173 2ny1_B T-cell surface glycopro 99.8 1.7E-20 5.8E-25 156.8 10.2 163 302-485 5-184 (184)
174 3grw_A Fibroblast growth facto 99.8 5.8E-19 2E-23 154.9 20.2 84 2-85 22-106 (241)
175 2gi7_A GPVI protein; IG-like d 99.8 6.6E-20 2.3E-24 152.7 13.4 158 291-469 7-169 (184)
176 1epf_A NCAM, protein (neural c 99.8 1.6E-18 5.3E-23 146.0 21.5 73 2-74 9-85 (191)
177 3l5i_A Interleukin-6 receptor 99.8 3.5E-18 1.2E-22 154.4 25.2 129 442-571 155-286 (290)
178 1zvo_C Myeloma immunoglobulin 99.8 3E-17 1E-21 160.0 33.4 224 246-471 79-388 (512)
179 3mj8_L Stimulatory hamster ant 99.8 3E-19 1E-23 153.3 16.9 171 301-474 9-207 (213)
180 3lpw_A A77-A78 domain from tit 99.8 2.5E-18 8.5E-23 145.6 22.3 192 188-574 4-195 (197)
181 1hng_A CD2; T lymphocyte adhes 99.8 4.7E-20 1.6E-24 151.8 11.3 155 302-478 6-174 (176)
182 1rhf_A Tyrosine-protein kinase 99.8 1.7E-18 5.8E-23 144.4 20.8 73 2-74 9-83 (182)
183 3d9a_L Light chain of hyhel10 99.8 3E-19 1E-23 153.3 16.5 176 297-475 6-208 (213)
184 1oll_A NK receptor; immune sys 99.8 4.4E-19 1.5E-23 148.3 16.9 176 291-478 3-186 (188)
185 2iep_A Muscle-specific kinase 99.8 6.2E-19 2.1E-23 148.7 16.8 80 304-386 112-192 (192)
186 1f3r_B FV antibody fragment; I 99.8 1.7E-18 5.7E-23 152.9 20.2 185 300-484 8-249 (257)
187 2fbo_J V1V2;, variable region- 99.8 1.7E-19 5.9E-24 159.3 13.7 171 299-470 9-239 (250)
188 2wqr_A IG epsilon chain C regi 99.8 2.1E-19 7E-24 165.0 14.2 213 248-469 73-309 (323)
189 2ghw_B Anti-SARS SCFV antibody 99.8 3.8E-18 1.3E-22 150.1 21.4 180 300-479 10-241 (247)
190 4frw_A Poliovirus receptor-rel 99.8 9.2E-19 3.1E-23 151.2 17.0 177 300-478 7-209 (218)
191 3sbw_C Programmed cell death 1 99.8 1.3E-18 4.3E-23 150.6 17.5 179 300-482 9-213 (222)
192 3nl4_L Antigen binding fragmen 99.8 2.4E-18 8.2E-23 147.6 18.8 168 294-464 3-198 (213)
193 1lk3_L 9D7 light chain; antige 99.8 1.3E-18 4.5E-23 148.8 16.7 170 299-471 7-203 (210)
194 1p6f_A NKP46, natural cytotoxi 99.8 2.6E-18 9E-23 148.8 17.8 184 291-486 6-197 (242)
195 1nqb_A Single-chain antibody f 99.8 4.1E-18 1.4E-22 150.0 19.2 178 300-480 8-233 (256)
196 3knb_B Obscurin-like protein 1 99.8 6.5E-19 2.2E-23 130.2 11.7 88 2-89 20-107 (107)
197 3ojm_B Fibroblast growth facto 99.8 2.2E-18 7.7E-23 150.2 17.2 84 3-86 27-111 (231)
198 2pet_A Lutheran blood group gl 99.8 5.1E-19 1.8E-23 154.2 13.0 176 300-478 8-229 (231)
199 1jbj_A CD3 epsilon and gamma e 99.8 1.7E-19 5.7E-24 150.3 9.1 146 304-470 11-179 (186)
200 1f97_A Junction adhesion molec 99.8 2.6E-18 8.9E-23 147.5 16.4 80 304-383 116-206 (212)
201 3auv_A SC-DSFV derived from th 99.8 1.1E-17 3.9E-22 149.3 20.5 191 292-484 12-258 (276)
202 3r06_A Anti-mouse CD3epsilon a 99.8 5.3E-18 1.8E-22 145.5 17.5 176 294-472 3-205 (213)
203 2vkw_A Neural cell adhesion mo 99.8 6.7E-18 2.3E-22 144.0 18.0 188 83-276 3-194 (209)
204 1nkr_A P58-CL42 KIR; inhibitor 99.8 8.8E-18 3E-22 142.2 18.5 167 291-466 7-183 (201)
205 2wqr_A IG epsilon chain C regi 99.8 2.4E-18 8.1E-23 157.9 16.0 264 291-562 6-309 (323)
206 3uzq_A Anti-dengue MAB 4E11; d 99.8 6E-18 2E-22 149.2 17.8 185 298-485 7-249 (253)
207 2v5t_A NCAM2, N-CAM 2, neural 99.8 5.9E-18 2E-22 142.3 16.8 78 304-383 110-187 (189)
208 4i0k_A CD276 antigen; immunogl 99.8 1.6E-18 5.3E-23 150.0 13.5 177 301-482 4-208 (222)
209 3k0w_A Mucosa-associated lymph 99.8 9.1E-18 3.1E-22 144.3 18.2 78 301-387 127-205 (218)
210 2v9r_A Roundabout homolog 1; p 99.8 2.7E-18 9.2E-23 147.4 14.9 86 304-392 123-210 (212)
211 1za6_B IGG heavy chain; immuno 99.8 7E-18 2.4E-22 156.2 18.7 171 300-474 8-211 (344)
212 3r8q_A Fibronectin; heparin, F 99.8 1.6E-16 5.5E-21 143.3 26.7 212 46-274 69-282 (290)
213 3tv3_L PGT128 light chain, IG 99.8 1.7E-18 5.6E-23 148.3 13.0 169 301-474 9-205 (211)
214 3gkz_A Anti-methamphetamine si 99.8 2.8E-17 9.6E-22 145.3 21.1 189 293-484 9-253 (257)
215 2vr9_A Roundabout 1, ROBO; imm 99.8 2.1E-18 7.3E-23 148.5 13.4 75 2-76 16-94 (217)
216 3s96_B 3B5H10 FAB light chain; 99.8 5.4E-18 1.9E-22 146.1 15.8 169 301-472 9-212 (218)
217 3esu_F Antibody 14B7* light ch 99.8 3.6E-17 1.2E-21 144.1 21.0 172 294-465 6-231 (250)
218 3umt_A SCFV heavy chain and li 99.8 2.8E-17 9.7E-22 145.1 20.2 179 301-482 11-247 (256)
219 1nfd_E H57 FAB; complex (immun 99.8 1.3E-18 4.5E-23 149.1 11.1 169 299-470 6-202 (212)
220 2ibg_A CG9211-PA, GH03927P; IH 99.8 6.2E-17 2.1E-21 138.7 21.5 91 481-571 115-208 (214)
221 3d85_D IL-12B, interleukin-12 99.8 4.7E-17 1.6E-21 145.6 21.3 250 296-570 10-302 (306)
222 2znx_A SCFV; fluorotryptohpan, 99.8 3.7E-17 1.3E-21 142.8 20.2 172 295-466 4-222 (242)
223 1q0x_L FAB 9B1, light chain; a 99.8 1.1E-17 3.9E-22 143.2 16.3 168 299-469 7-204 (212)
224 3juy_B 3B3 single chain varian 99.8 2.2E-17 7.5E-22 145.8 18.5 178 291-468 5-244 (256)
225 2p1y_A Bispecific alpha/beta T 99.8 2.3E-17 7.9E-22 144.2 18.3 168 296-467 4-222 (238)
226 1moe_A Anti-CEA MAB T84.66; an 99.8 3.1E-17 1.1E-21 143.6 19.1 171 296-466 5-220 (240)
227 1tdq_A Tenascin-R; extracellul 99.8 6.6E-16 2.2E-20 138.9 28.2 247 10-275 16-276 (283)
228 3sob_L Antibody light chain; b 99.8 1.5E-17 5.2E-22 145.4 17.0 180 293-475 25-231 (237)
229 3e0g_A Leukemia inhibitory fac 99.8 1.3E-14 4.4E-19 136.1 37.5 432 104-571 10-477 (483)
230 1qok_A MFE-23 recombinant anti 99.8 4.2E-17 1.4E-21 146.0 20.0 181 299-480 33-268 (282)
231 3mj6_A Junctional adhesion mol 99.8 5.7E-18 2E-22 151.2 14.2 182 293-480 6-237 (268)
232 3s97_C Contactin-1; carbonic a 99.8 1.4E-17 4.9E-22 141.5 15.7 79 301-383 122-200 (201)
233 1cfb_A Drosophila neuroglian; 99.8 1.5E-16 5.1E-21 135.2 21.7 186 85-276 2-193 (205)
234 3knb_A Titin; IG-like, titin, 99.8 1.3E-17 4.4E-22 121.8 12.9 87 1-87 11-99 (100)
235 2xzc_L FAB A.17 light chain; i 99.8 2E-17 6.7E-22 142.1 16.3 170 300-472 8-207 (216)
236 1svz_A Immunoglobulin;, single 99.8 5.9E-17 2E-21 142.4 18.7 169 296-466 5-228 (247)
237 2ibg_A CG9211-PA, GH03927P; IH 99.7 1.2E-16 4.1E-21 137.0 20.0 186 90-277 3-204 (214)
238 3r4d_A CEA-related cell adhesi 99.7 1.1E-16 3.6E-21 136.9 19.6 81 304-387 122-203 (208)
239 2cqv_A MLCK, myosin light chai 99.7 2.4E-17 8.2E-22 124.7 13.6 95 2-96 14-108 (114)
240 1c1e_H Catalytic antibody 1E9 99.7 4.9E-17 1.7E-21 140.0 17.3 173 300-476 8-216 (219)
241 2vkw_A Neural cell adhesion mo 99.7 2.8E-17 9.6E-22 140.1 15.6 186 188-569 7-197 (209)
242 1b6u_A KIR2DL3, P58 killer cel 99.7 1E-16 3.4E-21 139.9 19.3 184 291-483 6-204 (257)
243 2zg1_A Sialic acid-binding IG- 99.7 3.8E-17 1.3E-21 140.3 16.4 167 299-477 7-210 (214)
244 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 4.6E-17 1.6E-21 143.6 17.2 172 294-469 5-235 (256)
245 1cfb_A Drosophila neuroglian; 99.7 4.8E-16 1.6E-20 132.0 22.7 94 482-576 105-203 (205)
246 3bkj_L WO2 IGG2A FAB fragment 99.7 3E-17 1E-21 144.6 15.6 175 293-470 35-241 (252)
247 2if7_A SLAM family member 6; N 99.7 2.4E-17 8.3E-22 138.1 14.3 159 300-474 6-186 (193)
248 1f2q_A High affinity immunoglo 99.7 5.2E-17 1.8E-21 134.3 15.8 76 304-387 97-174 (176)
249 1dr9_A B7-1 (CD80), T lymphocy 99.7 1.2E-17 4.1E-22 141.7 12.2 171 301-476 3-197 (201)
250 1mju_H Immunoglobulin MS6-12; 99.7 6E-17 2.1E-21 139.8 16.6 182 300-485 8-222 (227)
251 3ux9_B SCFV antibody; five hel 99.7 1E-16 3.5E-21 141.7 18.6 167 301-467 11-236 (256)
252 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 1E-16 3.6E-21 138.2 17.9 173 300-476 8-219 (222)
253 1sy6_A T-cell surface glycopro 99.7 3.6E-18 1.2E-22 144.2 8.3 153 304-478 15-202 (204)
254 2gjj_A A21 single-chain antibo 99.7 2.6E-16 8.9E-21 139.1 20.3 173 292-466 5-239 (264)
255 3knb_B Obscurin-like protein 1 99.7 2.3E-17 7.9E-22 121.9 10.7 96 291-386 12-107 (107)
256 3pv7_A B7-H6, IG-like domain-c 99.7 1.1E-16 3.9E-21 140.7 17.2 175 300-478 11-224 (248)
257 3uto_A Twitchin; kinase, muscl 99.7 3.3E-16 1.1E-20 152.8 21.9 97 85-183 6-102 (573)
258 3uto_A Twitchin; kinase, muscl 99.7 1.4E-15 4.6E-20 148.5 26.0 95 189-285 9-103 (573)
259 4dzb_B Vbeta2 (MAIT T cell rec 99.7 4.8E-17 1.6E-21 142.9 14.3 175 295-471 4-222 (246)
260 1hnf_A CD2; T lymphocyte adhes 99.7 3.9E-17 1.4E-21 134.0 12.5 154 301-476 8-177 (182)
261 2j6e_L IGM, FAB light chain; a 99.7 4.6E-17 1.6E-21 141.9 13.8 172 299-473 26-228 (234)
262 4fmk_A Poliovirus receptor-rel 99.7 1.1E-16 3.7E-21 138.9 15.6 174 301-477 10-214 (225)
263 3eow_R Poliovirus receptor; im 99.7 2E-17 6.8E-22 142.7 10.5 180 300-485 7-215 (221)
264 3d9a_H Heavy chain of hyhel10 99.7 1.1E-16 3.8E-21 136.7 15.0 169 299-472 7-206 (210)
265 2ny1_B T-cell surface glycopro 99.7 1.3E-16 4.5E-21 133.0 15.0 74 304-387 109-182 (184)
266 1gsm_A Madcam-1, mucosal addre 99.7 1.1E-15 3.8E-20 126.3 20.2 158 302-470 17-195 (210)
267 2gki_A Nuclease; anti-DNA anti 99.7 5E-16 1.7E-20 139.5 19.7 180 300-482 30-274 (291)
268 3fl7_A Ephrin receptor; ATP-bi 99.7 2.2E-17 7.4E-22 157.2 11.3 212 57-277 301-525 (536)
269 3f7q_A Integrin beta-4, GP150; 99.7 2.4E-16 8E-21 136.9 16.8 181 88-277 5-190 (234)
270 3fku_X Neutralizing antibody F 99.7 4.1E-16 1.4E-20 139.2 18.4 181 299-483 7-253 (280)
271 3d9a_L Light chain of hyhel10 99.7 2.3E-16 8E-21 135.2 16.2 73 2-74 8-94 (213)
272 2ifg_A High affinity nerve gro 99.7 4.1E-17 1.4E-21 151.1 12.2 81 306-386 260-347 (347)
273 1hxm_B Gamma-delta T-cell rece 99.7 1.2E-15 4.1E-20 133.2 20.9 180 295-478 4-227 (242)
274 3p4l_A Neogenin; iron homeosta 99.7 1.1E-15 3.7E-20 130.5 20.0 182 90-277 6-196 (211)
275 3omz_A Human vdelta1 gamma del 99.7 2.3E-16 7.8E-21 139.6 16.0 171 293-466 3-231 (259)
276 2fbj_H IGA-kappa J539 FAB (hea 99.7 8E-16 2.8E-20 132.0 18.3 167 300-470 8-211 (220)
277 1bqu_A Protein (GP130); cytoki 99.7 1.7E-16 5.7E-21 136.1 14.0 178 403-582 9-211 (215)
278 2rgs_A I, IG gamma-2B heavy ch 99.7 1.2E-16 4E-21 136.9 12.9 177 291-470 8-206 (218)
279 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 9.5E-16 3.3E-20 136.2 19.0 175 292-466 15-254 (268)
280 1pz5_B Heavy chain of FAB (SYA 99.7 2.6E-16 8.9E-21 135.5 14.8 172 300-475 8-216 (220)
281 3bqu_C 3H6 FAB light chain; be 99.7 8E-18 2.7E-22 146.6 5.2 174 293-469 24-224 (233)
282 3lb6_C IL-13, interleukin-13 r 99.7 2E-15 6.7E-20 140.2 20.8 308 156-571 7-331 (380)
283 1ccz_A Protein (CD58); LFA-3, 99.7 1E-16 3.6E-21 130.7 10.3 152 301-476 4-167 (171)
284 3s98_A Interferon alpha/beta r 99.7 1.6E-15 5.5E-20 136.5 19.0 161 96-268 10-180 (306)
285 3bae_H WO2 IGG2A FAB fragment 99.7 1.1E-15 3.6E-20 132.2 16.9 171 300-474 8-220 (228)
286 3f7q_A Integrin beta-4, GP150; 99.7 4.4E-16 1.5E-20 135.1 14.5 142 441-583 55-206 (234)
287 3l5i_A Interleukin-6 receptor 99.7 7.8E-15 2.7E-19 132.3 23.3 254 103-384 22-288 (290)
288 1op3_H FAB 2G12, heavy chain; 99.7 9.2E-16 3.2E-20 132.3 16.2 165 300-469 8-214 (225)
289 3qib_D 2B4 beta chain; IG doma 99.7 2E-16 6.7E-21 141.0 12.2 203 255-472 4-247 (270)
290 1lk3_L 9D7 light chain; antige 99.7 1.4E-15 4.9E-20 129.8 17.1 72 2-73 7-92 (210)
291 2yuw_A Myosin binding protein 99.7 2.6E-16 8.9E-21 117.9 10.7 101 480-580 6-108 (110)
292 2vol_A Murine IGG FC; FC, zinc 99.7 3.5E-16 1.2E-20 132.8 12.9 170 298-470 8-198 (207)
293 3mj8_L Stimulatory hamster ant 99.7 1.8E-15 6.1E-20 129.7 17.4 73 3-75 8-94 (213)
294 3nl4_H Antigen binding fragmen 99.7 1.1E-15 3.8E-20 130.9 16.1 175 299-477 6-211 (215)
295 1gxe_A Myosin binding protein 99.7 2.1E-16 7.1E-21 122.2 10.2 87 1-87 24-139 (139)
296 2crz_A Fibronectin type-III do 99.7 3.9E-16 1.3E-20 116.9 11.4 101 480-581 7-108 (110)
297 1wf5_A Sidekick 2 protein; FNI 99.7 1.7E-16 5.7E-21 121.6 9.4 114 467-582 3-121 (121)
298 1dee_B IGM RF 2A2; FAB-IBP com 99.7 4.7E-15 1.6E-19 127.5 19.6 171 300-473 8-220 (223)
299 2e7c_A Myosin-binding protein 99.7 9.2E-16 3.2E-20 116.7 13.2 88 2-90 31-118 (118)
300 2yuz_A Myosin-binding protein 99.7 4.7E-16 1.6E-20 113.4 10.9 85 2-90 14-98 (100)
301 1uey_A KIAA0343 protein; immun 99.7 3.7E-16 1.3E-20 120.6 10.8 116 471-588 6-125 (127)
302 1wfu_A Unnamed protein product 99.7 2.1E-16 7.2E-21 117.8 9.0 100 475-574 9-112 (120)
303 3fl7_A Ephrin receptor; ATP-bi 99.7 5.3E-16 1.8E-20 147.7 14.0 214 354-573 301-531 (536)
304 3qp3_A Titin; I-SET IG-like, s 99.7 1.3E-15 4.3E-20 112.9 13.1 87 2-88 15-101 (103)
305 1bpv_A Titin, A71, connectin; 99.7 9.9E-17 3.4E-21 119.1 7.0 97 480-576 9-108 (112)
306 3d85_D IL-12B, interleukin-12 99.7 2.7E-15 9.3E-20 134.2 17.6 246 7-279 18-301 (306)
307 2lu7_A Obscurin-like protein 1 99.7 3.1E-16 1.1E-20 109.4 9.0 80 3-87 4-83 (84)
308 1x5y_A Myosin binding protein 99.7 4.1E-16 1.4E-20 117.0 10.3 101 480-580 7-109 (111)
309 3nfj_J T cell receptor beta ch 99.7 2E-15 7E-20 132.3 16.4 177 295-471 4-221 (245)
310 3knb_A Titin; IG-like, titin, 99.7 6.1E-16 2.1E-20 112.8 10.7 93 291-383 4-98 (100)
311 2bk8_A Connectin, M1, titin he 99.7 2.2E-15 7.5E-20 110.0 13.8 87 2-88 8-95 (97)
312 1bqu_A Protein (GP130); cytoki 99.7 1.5E-15 5E-20 130.2 14.9 192 87-285 6-202 (215)
313 2dru_A Chimera of CD48 antigen 99.7 7.2E-16 2.4E-20 127.0 12.2 151 301-474 8-175 (180)
314 3liz_H 4C3 monoclonal antibody 99.7 3.5E-15 1.2E-19 131.1 17.3 177 300-480 8-220 (253)
315 1dn0_B IGM-kappa cold agglutin 99.7 7.5E-15 2.6E-19 127.0 19.1 178 300-480 8-227 (232)
316 2ha1_A Fibronectin; beta sandw 99.7 6.8E-15 2.3E-19 124.3 18.4 172 96-274 6-192 (201)
317 3sbw_C Programmed cell death 1 99.7 7.5E-15 2.6E-19 126.7 19.0 83 306-388 130-215 (222)
318 1x4z_A Biregional cell adhesio 99.7 9.4E-16 3.2E-20 117.1 11.4 104 476-580 12-119 (121)
319 3bpo_C Interleukin-13 receptor 99.6 2.8E-13 9.7E-18 123.1 29.3 263 191-559 5-289 (314)
320 1wis_A KIAA1514 protein; FNIII 99.6 3.1E-16 1.1E-20 120.1 8.2 103 479-582 15-124 (124)
321 3jz7_A MCAR, CAR, coxsackievir 99.6 8.6E-16 2.9E-20 131.9 11.9 168 2-172 7-202 (214)
322 3irg_B Obscurin-like protein 1 99.6 1.5E-15 5.2E-20 113.5 11.7 88 2-89 20-107 (107)
323 3bp6_B Programmed cell death 1 99.6 7.2E-16 2.5E-20 130.8 11.1 164 2-173 9-184 (202)
324 4ei6_B Vbeta16 XV19 type II na 99.6 1.5E-15 5.1E-20 133.3 13.3 174 295-471 5-221 (245)
325 2xqy_G A13-D6.3 monoclonal ant 99.6 6.4E-15 2.2E-19 129.4 17.2 166 300-469 14-214 (261)
326 3q5y_A TCR N15 beta; IG, T cel 99.6 3.5E-15 1.2E-19 130.3 15.5 173 296-471 6-215 (240)
327 3m8o_H Immunoglobulin A1 heavy 99.6 1.3E-14 4.5E-19 124.8 18.8 166 300-470 8-213 (221)
328 2kkq_A Myotilin; unknown funct 99.6 2.9E-15 1E-19 113.1 12.9 91 2-92 22-114 (116)
329 1mq8_A ICAM-1, intercellular a 99.6 5.8E-16 2E-20 136.2 10.3 259 197-483 8-285 (291)
330 3puc_A Titin; I-SET IG-like do 99.6 3.4E-15 1.2E-19 109.7 12.9 86 2-87 13-98 (99)
331 2x1w_L Vascular endothelial gr 99.6 5.4E-15 1.8E-19 126.3 16.1 181 197-388 16-211 (213)
332 1g1c_A Immunoglobulin-like dom 99.6 3.9E-15 1.3E-19 109.4 13.1 86 2-87 12-98 (99)
333 2kdg_A Myotilin; immonoglobuli 99.6 2.5E-15 8.6E-20 110.7 12.1 87 2-88 12-99 (100)
334 3nl4_L Antigen binding fragmen 99.6 1.6E-14 5.5E-19 123.7 18.7 72 2-73 8-93 (213)
335 1qr4_A Protein (tenascin); fib 99.6 2.5E-14 8.6E-19 119.2 19.3 172 85-274 3-174 (186)
336 1waa_A Titin; metal binding pr 99.6 3.4E-15 1.2E-19 106.9 12.1 81 2-87 12-92 (93)
337 2yux_A Myosin-binding protein 99.6 2.5E-16 8.6E-21 119.9 6.3 105 467-571 3-108 (120)
338 1i1c_A IGG2A, IG gamma-2A chai 99.6 1.4E-15 4.9E-20 131.6 11.8 163 304-469 29-211 (239)
339 2dm2_A Palladin; beta-sandwich 99.6 1.5E-15 5E-20 114.0 10.4 92 2-93 15-108 (110)
340 1x4x_A Fibronectin type-III do 99.6 2.6E-15 8.9E-20 111.2 11.4 99 480-581 6-104 (106)
341 2gys_A Cytokine receptor commo 99.6 7E-14 2.4E-18 132.6 24.3 320 151-571 77-413 (419)
342 2gee_A Hypothetical protein; f 99.6 2.1E-14 7.2E-19 121.2 18.5 166 96-275 29-196 (203)
343 1b6u_A KIR2DL3, P58 killer cel 99.6 6.8E-15 2.3E-19 128.3 15.8 212 199-426 17-240 (257)
344 2w59_A IGY FCU3-4; immunoglobu 99.6 6.2E-15 2.1E-19 127.3 15.2 174 292-470 12-218 (231)
345 1vca_A VCAM-D1,2, human vascul 99.6 1.4E-14 4.6E-19 122.2 16.6 161 4-172 10-180 (202)
346 3pl6_D MBP peptide / T-cell re 99.6 1.7E-15 5.9E-20 134.8 11.5 178 293-471 27-243 (268)
347 3b5h_A Cervical EMMPRIN, HAB18 99.6 4.9E-14 1.7E-18 117.4 19.4 164 198-383 8-182 (184)
348 1he7_A High affinity nerve gro 99.6 6.8E-15 2.3E-19 109.6 12.4 84 9-92 14-104 (126)
349 1wit_A Twitchin 18TH IGSF modu 99.6 3.2E-15 1.1E-19 108.1 10.4 83 2-86 9-93 (93)
350 2c1o_A IGK-C protein; FAB frag 99.6 2.2E-15 7.5E-20 133.0 11.5 126 245-374 111-245 (254)
351 1c5d_H Monoclonal antibody aga 99.6 1.9E-14 6.5E-19 123.0 17.0 169 300-473 8-209 (215)
352 1x5x_A Fibronectin type-III do 99.6 4.1E-15 1.4E-19 111.1 11.2 101 480-581 6-107 (109)
353 3p2t_A Leukocyte immunoglobuli 99.6 3.6E-15 1.2E-19 125.6 12.2 159 6-171 15-180 (196)
354 3bn9_D E2 FAB heavy chain; ant 99.6 5.9E-15 2E-19 128.9 13.9 166 300-469 8-219 (257)
355 1u2h_A APEG-1, aortic preferen 99.6 6.1E-15 2.1E-19 108.3 11.7 86 2-87 12-98 (99)
356 2cqv_A MLCK, myosin light chai 99.6 1.4E-14 4.7E-19 109.4 13.9 101 291-391 6-106 (114)
357 2crm_A Fibronectin type-III do 99.6 4.1E-15 1.4E-19 113.4 10.7 97 479-576 15-113 (120)
358 1x44_A Myosin-binding protein 99.6 9E-15 3.1E-19 108.0 12.2 86 2-92 14-101 (103)
359 2wbj_D OB TCR; transmembrane, 99.6 2.1E-14 7.2E-19 128.3 17.0 180 292-471 24-247 (279)
360 1x3d_A Fibronectin type-III do 99.6 6.8E-15 2.3E-19 111.9 11.8 101 480-582 16-117 (118)
361 3irg_A Titin; IG-like, titin, 99.6 1.1E-14 3.9E-19 107.2 12.7 86 2-87 12-99 (100)
362 1uem_A KIAA1568 protein; immun 99.6 2.1E-15 7.1E-20 114.7 8.8 106 475-581 9-116 (117)
363 1v5j_A KIAA1355 protein, RSGI 99.6 7.1E-16 2.4E-20 112.3 5.8 97 480-579 6-105 (108)
364 1nct_A Titin; cell adhesion, g 99.6 8.6E-16 2.9E-20 113.8 6.3 85 2-86 21-105 (106)
365 2dav_A SLOW MYBP-C, myosin-bin 99.6 8.3E-15 2.8E-19 109.4 11.6 92 2-93 14-118 (126)
366 2dm3_A KIAA0992 protein, palla 99.6 1.4E-15 4.7E-20 114.3 7.4 92 2-93 16-108 (110)
367 1nbq_A JAM, junctional adhesio 99.6 1.5E-15 5.3E-20 129.8 8.6 164 2-172 11-197 (209)
368 1l6x_A Immunoglobulin gamma-1 99.6 5.2E-15 1.8E-19 125.7 11.8 163 305-470 16-198 (207)
369 3p4l_A Neogenin; iron homeosta 99.6 2.7E-14 9.3E-19 121.8 16.3 132 441-573 61-202 (211)
370 2e3v_A Neural cell adhesion mo 99.6 4.7E-15 1.6E-19 112.9 10.2 95 480-576 6-105 (122)
371 3sgj_C Human FCG3A receptor; r 99.6 1.3E-14 4.4E-19 122.5 13.6 147 2-170 14-161 (204)
372 3shs_A HOC head outer capsid p 99.6 1.2E-12 4.3E-17 108.3 24.0 242 295-557 5-278 (304)
373 1mq8_A ICAM-1, intercellular a 99.6 4.7E-14 1.6E-18 124.1 16.9 242 299-560 6-269 (291)
374 2e6p_A Obscurin-like protein 1 99.6 1E-14 3.4E-19 108.1 10.8 84 5-93 20-103 (104)
375 3uzq_A Anti-dengue MAB 4E11; d 99.6 1.2E-13 4E-18 121.6 19.3 141 247-389 80-249 (253)
376 1qr4_A Protein (tenascin); fib 99.6 1.2E-13 4E-18 115.1 18.3 125 438-567 52-177 (186)
377 2dju_A Receptor-type tyrosine- 99.6 9E-15 3.1E-19 108.9 10.1 102 478-583 4-106 (106)
378 2lvc_A Obscurin-like protein 1 99.6 4.8E-15 1.6E-19 105.2 8.2 68 5-73 16-83 (91)
379 1ypz_F T-cell receptor gamma c 99.6 4.2E-14 1.4E-18 122.1 15.7 175 299-477 8-224 (230)
380 1bec_A 14.3.D T cell antigen r 99.6 1.1E-13 3.8E-18 120.3 18.5 170 297-469 4-212 (238)
381 2d3v_A Leukocyte immunoglobuli 99.6 1.7E-14 5.9E-19 121.3 12.9 159 5-170 14-180 (196)
382 2ed9_A Netrin receptor DCC; tu 99.6 4E-15 1.4E-19 114.4 8.2 116 459-575 2-122 (124)
383 2haz_A N-CAM 1, neural cell ad 99.6 5.6E-15 1.9E-19 109.2 8.6 93 480-573 5-102 (105)
384 2eny_A Obscurin; beta-sandwich 99.6 6.7E-15 2.3E-19 108.4 8.8 87 2-92 15-102 (104)
385 2edf_A Obscurin; beta-sandwich 99.6 8.9E-15 3E-19 108.2 9.4 87 2-93 15-101 (103)
386 3o3u_N Maltose-binding peripla 99.6 1.3E-14 4.3E-19 145.0 13.3 165 302-470 376-567 (581)
387 2ic2_A CG9211-PA, GH03927P; IH 99.6 1.9E-14 6.6E-19 107.4 11.0 93 480-576 4-110 (115)
388 1fnl_A Low affinity immunoglob 99.6 5.2E-14 1.8E-18 115.9 14.7 147 2-170 14-161 (175)
389 1uct_A Immunoglobulin alpha FC 99.6 5.3E-14 1.8E-18 119.9 15.2 173 199-384 19-198 (218)
390 1fhg_A Telokin; immunoglobulin 99.6 3.2E-14 1.1E-18 113.8 13.0 92 2-93 48-140 (154)
391 2gi7_A GPVI protein; IG-like d 99.6 5.6E-14 1.9E-18 116.7 14.9 151 199-372 18-168 (184)
392 1wwb_X Protein (brain derived 99.6 2.6E-14 9E-19 105.0 11.3 83 8-90 14-101 (103)
393 1nqb_A Single-chain antibody f 99.6 4.1E-13 1.4E-17 118.0 21.1 134 246-384 78-233 (256)
394 2yuz_A Myosin-binding protein 99.6 1.6E-14 5.3E-19 105.3 9.9 93 291-387 6-98 (100)
395 3e0g_A Leukemia inhibitory fac 99.6 1E-13 3.5E-18 130.0 17.9 258 1-279 204-472 (483)
396 1f3r_B FV antibody fragment; I 99.6 1.9E-13 6.4E-18 120.5 18.7 141 246-386 77-247 (257)
397 3se4_A Interferon alpha/beta r 99.6 3.4E-13 1.2E-17 127.6 21.6 135 443-584 162-314 (414)
398 2ed7_A Netrin receptor DCC; tu 99.6 1.6E-14 5.4E-19 110.2 10.1 101 478-579 14-116 (119)
399 2e7c_A Myosin-binding protein 99.6 3.4E-14 1.2E-18 107.9 11.7 99 384-483 20-118 (118)
400 3qp3_A Titin; I-SET IG-like, s 99.6 4.5E-14 1.6E-18 104.4 12.1 95 291-385 7-101 (103)
401 2e7h_A Ephrin type-B receptor 99.6 2.3E-14 8E-19 106.8 10.5 98 480-579 6-106 (109)
402 1ugn_A LIR1, leukocyte immunog 99.6 7.2E-14 2.5E-18 117.8 14.7 162 199-372 15-181 (198)
403 3to4_D NKT vbeta2 (mouse varia 99.6 2.4E-14 8.3E-19 125.9 12.0 170 299-469 8-219 (253)
404 3kvq_A Vascular endothelial gr 99.6 1.1E-14 3.6E-19 109.0 8.2 89 2-92 17-105 (108)
405 1jbj_A CD3 epsilon and gamma e 99.6 1.9E-14 6.4E-19 119.6 10.5 143 6-171 10-178 (186)
406 2cr3_A Basic fibroblast growth 99.5 9.5E-15 3.3E-19 106.8 7.6 86 2-92 10-95 (99)
407 2edj_A Roundabout homolog 2; K 99.5 1.7E-14 5.8E-19 106.1 8.9 85 2-89 15-100 (100)
408 2db8_A Tripartite motif protei 99.5 1.5E-14 5.2E-19 107.6 8.7 93 482-575 10-103 (110)
409 2ckn_A Basic fibroblast growth 99.5 1.4E-14 4.7E-19 105.1 8.3 79 2-85 16-94 (95)
410 2ghw_B Anti-SARS SCFV antibody 99.5 5E-13 1.7E-17 117.2 19.7 137 246-383 80-241 (247)
411 3irg_B Obscurin-like protein 1 99.5 3.9E-14 1.3E-18 105.7 10.7 97 290-386 11-107 (107)
412 2edn_A Myosin-binding protein 99.5 1.4E-14 4.9E-19 106.8 8.0 87 2-88 19-117 (118)
413 2djs_A Ephrin type-B receptor 99.5 3.6E-14 1.2E-18 105.8 10.4 95 480-575 6-101 (108)
414 1oll_A NK receptor; immune sys 99.5 1.4E-13 4.9E-18 114.7 15.2 154 6-169 14-172 (188)
415 2fbo_J V1V2;, variable region- 99.5 8.7E-14 3E-18 122.6 14.6 125 247-374 90-239 (250)
416 4acp_A IG gamma-1 chain C regi 99.5 2.6E-14 8.8E-19 123.1 10.7 195 260-468 1-217 (240)
417 3cx2_A Myosin-binding protein 99.5 9.2E-14 3.2E-18 103.4 12.3 85 2-86 11-107 (108)
418 2k1m_A Myosin-binding protein 99.5 5.9E-14 2E-18 101.7 10.9 80 2-86 15-94 (95)
419 2dm4_A Sortilin-related recept 99.5 4E-14 1.4E-18 105.5 10.3 99 480-581 6-106 (108)
420 2yuv_A Myosin-binding protein 99.5 6.9E-14 2.4E-18 102.6 11.3 80 5-89 18-97 (100)
421 3tv3_H PGT128 heavy chain, IG 99.5 2.4E-13 8.2E-18 118.1 16.6 174 300-477 8-234 (239)
422 1x5f_A Neogenin; RGM binding, 99.5 1.8E-14 6.1E-19 110.0 8.4 99 478-577 14-115 (120)
423 2ed8_A Netrin receptor DCC; tu 99.5 3.4E-14 1.2E-18 105.5 9.6 97 480-579 6-102 (106)
424 1cd9_B G-CSF-R, protein (G-CSF 99.5 6E-13 2E-17 113.7 18.6 191 88-285 4-210 (215)
425 4go6_B HCF C-terminal chain 1; 99.5 5.3E-14 1.8E-18 121.0 12.0 126 442-568 44-194 (232)
426 2dtg_E Insulin receptor; IR ec 99.5 9.5E-15 3.3E-19 151.4 8.7 225 51-278 549-881 (897)
427 1g1c_A Immunoglobulin-like dom 99.5 1.1E-13 3.6E-18 101.6 12.0 94 291-384 4-98 (99)
428 2dku_A KIAA1556 protein; beta- 99.5 7.1E-14 2.4E-18 103.3 11.0 87 2-93 15-101 (103)
429 3puc_A Titin; I-SET IG-like do 99.5 1.2E-13 4.1E-18 101.4 11.9 93 291-383 5-97 (99)
430 1waa_A Titin; metal binding pr 99.5 1.3E-13 4.6E-18 98.6 11.7 89 290-383 3-91 (93)
431 2yr3_A Myosin light chain kina 99.5 3.2E-14 1.1E-18 104.3 8.8 81 2-85 18-98 (99)
432 3caf_A Fibroblast growth facto 99.5 2.1E-14 7.1E-19 105.6 7.7 84 3-86 16-100 (100)
433 2kkq_A Myotilin; unknown funct 99.5 1.4E-13 4.8E-18 103.8 12.4 99 291-389 14-114 (116)
434 1x5g_A Neogenin; RGM binding, 99.5 5.5E-14 1.9E-18 106.5 10.2 98 480-580 16-113 (116)
435 2eo9_A Roundabout homolog 1; b 99.5 4.7E-14 1.6E-18 107.3 9.8 87 2-91 15-102 (118)
436 1nkr_A P58-CL42 KIR; inhibitor 99.5 3.2E-13 1.1E-17 114.0 16.0 120 246-371 62-184 (201)
437 3umt_A SCFV heavy chain and li 99.5 1.1E-12 3.8E-17 115.5 20.1 141 246-386 80-247 (256)
438 2gee_A Hypothetical protein; f 99.5 9.9E-13 3.4E-17 111.0 18.8 125 439-567 72-198 (203)
439 2e6q_A Obscurin-like protein 1 99.5 1.3E-13 4.4E-18 101.2 11.5 85 2-91 15-109 (112)
440 3qhz_H Human monoclonal antibo 99.5 2.5E-13 8.4E-18 117.7 15.4 175 300-478 8-227 (232)
441 1cd9_B G-CSF-R, protein (G-CSF 99.5 5.7E-13 1.9E-17 113.9 17.3 127 443-570 67-205 (215)
442 4f80_A Butyrophilin subfamily 99.5 8.4E-14 2.9E-18 120.3 12.2 129 246-384 82-213 (226)
443 1wfo_A Sidekick 2; FN3, cell a 99.5 9.5E-15 3.3E-19 113.3 5.5 119 461-581 3-128 (130)
444 3u2s_H PG9 heavy chain; greek 99.5 3.7E-13 1.2E-17 117.3 16.1 175 299-477 6-235 (248)
445 1wit_A Twitchin 18TH IGSF modu 99.5 1.6E-13 5.4E-18 99.1 11.5 89 292-382 2-92 (93)
446 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.5 5.3E-13 1.8E-17 117.5 17.0 164 2-170 10-234 (256)
447 2kbg_A N-CAM 2, neural cell ad 99.5 1.7E-14 5.9E-19 106.1 6.2 87 480-568 7-95 (114)
448 1pd6_A Cardiac MYBP-C;, myosin 99.5 1.3E-13 4.3E-18 101.3 10.8 80 2-86 23-103 (104)
449 2edk_A Myosin-binding protein 99.5 1.5E-14 5.1E-19 106.4 5.8 83 2-89 15-101 (101)
450 1p6f_A NKP46, natural cytotoxi 99.5 6.3E-13 2.1E-17 115.0 16.9 155 6-169 17-175 (242)
451 1qok_A MFE-23 recombinant anti 99.5 2.1E-12 7.2E-17 115.4 20.9 137 246-383 104-267 (282)
452 2dlt_A Myosin binding protein 99.5 5.6E-14 1.9E-18 104.4 8.9 83 2-87 15-97 (106)
453 1x5a_A Ephrin type-A receptor 99.5 2.1E-13 7.1E-18 100.7 11.5 91 480-576 8-101 (107)
454 1wwb_X Protein (brain derived 99.5 3E-13 1E-17 99.3 12.3 83 401-483 14-101 (103)
455 3ry4_A Low affinity immunoglob 99.5 3.5E-13 1.2E-17 110.6 14.1 148 2-171 11-159 (170)
456 1x4y_A Biregional cell adhesio 99.5 1.1E-13 3.6E-18 104.2 10.0 96 480-576 7-107 (114)
457 1x5z_A Receptor-type tyrosine- 99.5 2.3E-14 7.8E-19 108.5 6.3 100 480-583 16-115 (115)
458 2edb_A Netrin receptor DCC; tu 99.5 9.6E-14 3.3E-18 104.4 9.7 96 480-579 16-111 (116)
459 2pet_A Lutheran blood group gl 99.5 8.2E-13 2.8E-17 114.7 17.1 121 245-370 75-211 (231)
460 4hwu_A Fibroblast growth facto 99.5 1.2E-13 4E-18 100.3 9.8 83 2-90 8-90 (95)
461 1ypz_E T cell receptor delta, 99.5 9.9E-13 3.4E-17 111.1 17.0 163 298-469 7-198 (207)
462 2edh_A Obscurin; structural ge 99.5 2.6E-13 8.8E-18 102.2 12.0 84 2-91 26-109 (113)
463 1hng_A CD2; T lymphocyte adhes 99.5 1.5E-13 5E-18 112.9 11.1 150 3-173 4-167 (176)
464 2dm2_A Palladin; beta-sandwich 99.5 2.8E-13 9.6E-18 101.4 11.7 98 290-387 6-105 (110)
465 1x5l_A Ephrin type-A receptor 99.5 1.2E-13 4.1E-18 103.7 9.7 94 480-575 9-104 (111)
466 3juy_B 3B3 single chain varian 99.5 3.2E-12 1.1E-16 112.6 20.5 126 247-372 85-244 (256)
467 3esu_F Antibody 14B7* light ch 99.5 2.4E-12 8.2E-17 113.1 19.5 163 2-167 11-231 (250)
468 1x5i_A Neogenin; RGM binding, 99.5 6.6E-14 2.2E-18 107.2 8.2 87 481-569 27-113 (126)
469 2cpc_A KIAA0657 protein; immun 99.5 4.4E-13 1.5E-17 101.0 12.7 84 5-93 23-106 (113)
470 2e7b_A Obscurin; IG-like domai 99.5 1E-13 3.5E-18 102.4 9.0 84 2-90 15-98 (103)
471 1oga_E TRBC1, T-cell receptor 99.5 2.1E-13 7.1E-18 119.8 12.4 174 295-471 6-220 (252)
472 3n06_B PRL-R, prolactin recept 99.5 2.1E-12 7.3E-17 109.7 18.3 177 88-272 3-190 (210)
473 2edx_A Protein tyrosine phosph 99.5 3.7E-13 1.3E-17 105.1 12.5 109 481-590 17-131 (134)
474 1wk0_A KIAA0970 protein; fibro 99.5 3.1E-13 1E-17 102.6 11.5 106 480-586 16-130 (137)
475 2lu7_A Obscurin-like protein 1 99.5 2E-13 6.9E-18 95.1 9.5 81 396-481 4-84 (84)
476 1nct_A Titin; cell adhesion, g 99.5 1.4E-13 4.6E-18 101.9 9.2 94 290-383 12-105 (106)
477 1he7_A High affinity nerve gro 99.5 4.4E-13 1.5E-17 99.9 11.8 83 402-484 14-103 (126)
478 2ede_A Netrin receptor DCC; tu 99.5 2.5E-13 8.4E-18 102.5 10.8 98 480-579 7-110 (114)
479 3n06_B PRL-R, prolactin recept 99.5 2.4E-12 8E-17 109.4 18.1 132 444-576 62-204 (210)
480 2znx_A SCFV; fluorotryptohpan, 99.5 8.1E-13 2.8E-17 115.2 15.5 166 2-167 8-221 (242)
481 2p1y_A Bispecific alpha/beta T 99.5 2.8E-12 9.7E-17 111.7 18.9 126 246-371 72-222 (238)
482 4frw_A Poliovirus receptor-rel 99.5 6.6E-13 2.3E-17 114.2 14.7 129 247-383 79-210 (218)
483 1ow0_A IG alpha-1 chain C regi 99.5 3.4E-14 1.2E-18 121.2 6.4 170 296-469 8-200 (214)
484 3auv_A SC-DSFV derived from th 99.5 1.1E-12 3.8E-17 116.9 16.4 168 2-169 19-236 (276)
485 2dn7_A Receptor-type tyrosine- 99.5 1.7E-13 5.8E-18 102.0 9.4 99 480-582 6-105 (107)
486 3m45_A Cell adhesion molecule 99.5 6.1E-13 2.1E-17 99.5 12.5 87 2-89 13-108 (108)
487 2edj_A Roundabout homolog 2; K 99.5 1.9E-13 6.6E-18 100.3 9.4 94 290-386 6-100 (100)
488 1moe_A Anti-CEA MAB T84.66; an 99.5 1.1E-12 3.8E-17 114.5 16.0 163 2-167 8-219 (240)
489 2if7_A SLAM family member 6; N 99.5 2.3E-13 8E-18 113.8 11.1 158 2-172 5-182 (193)
490 2kdg_A Myotilin; immonoglobuli 99.5 1.9E-13 6.6E-18 100.4 9.4 95 291-385 4-99 (100)
491 2yrz_A Integrin beta-4; GP150, 99.5 1.4E-13 4.8E-18 104.6 8.8 88 479-568 15-104 (118)
492 2cr6_A KIAA1556 protein, obscu 99.5 5.2E-14 1.8E-18 106.2 6.4 86 2-91 20-106 (115)
493 2zg1_A Sialic acid-binding IG- 99.5 3.8E-13 1.3E-17 115.2 12.6 167 1-171 6-202 (214)
494 2bk8_A Connectin, M1, titin he 99.5 9.4E-13 3.2E-17 95.9 12.9 88 297-384 6-94 (97)
495 3gkz_A Anti-methamphetamine si 99.5 5.8E-12 2E-16 111.1 20.2 140 246-385 85-250 (257)
496 1gxe_A Myosin binding protein 99.5 2E-13 6.8E-18 105.5 9.3 93 387-479 17-138 (139)
497 1u2h_A APEG-1, aortic preferen 99.5 3.4E-13 1.2E-17 98.9 10.1 93 291-383 4-97 (99)
498 3rbg_A Cytotoxic and regulator 99.5 5.8E-13 2E-17 101.9 11.6 90 2-92 8-106 (124)
499 2dm3_A KIAA0992 protein, palla 99.5 4.3E-13 1.5E-17 100.5 10.6 98 291-388 8-106 (110)
500 2lvc_A Obscurin-like protein 1 99.5 3.5E-13 1.2E-17 95.5 9.5 78 292-370 4-83 (91)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1.5e-53 Score=423.68 Aligned_cols=543 Identities=17% Similarity=0.233 Sum_probs=385.8
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
++++.+.+|+++.|.|.+.|.|.+.|.|+|||..+....++++...++..+|.|.+++.+|+|.|+|.|.|..|......
T Consensus 12 ~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~ 91 (570)
T 3b43_A 12 LEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSA 91 (570)
T ss_dssp CCCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEE
Confidence 45788999999999999999999999999999999888888887777788999999999999999999999999988888
Q ss_pred EEEEecCCCCCC---CCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcE
Q psy12425 82 TINITGLPGPPI---GPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQE 158 (591)
Q Consensus 82 ~l~v~~~p~~p~---~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 158 (591)
.+.|...+.+|. .+..+....+..+.|.|...... ...+.||.= ....................+.|..+...+.
T Consensus 92 ~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p-~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~ 169 (570)
T 3b43_A 92 VLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSE-PLQVSWYKD-GELLKDDANLQTSFIHNVATLQILQTDQSHV 169 (570)
T ss_dssp EEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSS-SCEEEEEET-TEECCCCSSEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEECCCCCCCcccccCCCeEecCCCeEEEEEEEccCC-CCEEEEEEC-CEECcCCCCEEEEEECCEEEEEECcCChHHC
Confidence 888876443333 22334555678899999743211 112333321 1111111112222223456788999999999
Q ss_pred EEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCC-CCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccE
Q psy12425 159 YLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG-IPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQ 237 (591)
Q Consensus 159 y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~ 237 (591)
+.|+|.|.|..|....+.... ......+|.... ........|..++|.|.....+. ..+. |...........-.
T Consensus 170 G~Y~C~a~n~~g~~~~~~~l~---v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~-p~i~-W~k~g~~i~~~~~~ 244 (570)
T 3b43_A 170 GQYNCSASNPLGTASSSAKLT---LSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAP-IKIT-WAKDNREIRPGGNY 244 (570)
T ss_dssp EEEEEEEEETTEEEEEEEEEE---EECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSC-CEEE-EEETTEECCTTSSE
T ss_pred EEEEEEEEeCCcEEEEEEEEE---EcCCCCCCccccCCceeEecCCCeEEEEEEEEECCC-CEEE-EEECCEECcCCCcE
Confidence 999999999887643322111 111111111000 01123346788999998753221 1222 22111111111111
Q ss_pred EEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeecc-ccceeccccEEEEEEE
Q psy12425 238 RVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLR-NANAIQNHNAQFQCTI 316 (591)
Q Consensus 238 ~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~g~~~~l~c~~ 316 (591)
... .......|.|.++...|.|.|+|.|.|..|... ....+.+. .+|.+...+. ...+.+|+.+.|.|.+
T Consensus 245 ~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~---~~~~l~V~-----~~p~~~~~~~~~~~v~~g~~~~l~C~~ 315 (570)
T 3b43_A 245 KMT-LVENTATLTVLKVTKGDAGQYTCYASNVAGKDS---CSAQLGVQ-----EPPRFIKKLEPSRIVKQDEHTRYECKI 315 (570)
T ss_dssp EEE-EETTEEEEEESSBCGGGCEEEEEEEEETTEEEE---EEEEECCB-----CCCEEEECCCSBCCEESSCEEEEEEEE
T ss_pred EEE-EECCEEEEEEcccCcccCEEEEEEEECCCCcEE---EEEEEEee-----cCCcccccCCCccEEcCCCcEEEEEEE
Confidence 111 112346899999999999999999999887532 23344443 5677665543 3457889999999999
Q ss_pred cCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCccc
Q psy12425 317 TGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRD 396 (591)
Q Consensus 317 ~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~ 396 (591)
.|.|.+.+.|++++..+....++.+...+....|.|.++..+|+|.|+|.|.|..|.......|.|..+|.+...+.
T Consensus 316 ~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~--- 392 (570)
T 3b43_A 316 GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPH--- 392 (570)
T ss_dssp ESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCC---
T ss_pred eeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCC---
Confidence 99999999999999999888888877777778999999999999999999999999999999999999998776553
Q ss_pred ceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEE
Q psy12425 397 TAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKI 476 (591)
Q Consensus 397 ~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~ 476 (591)
...+..|+.+.|.|.+.|.|.|.+.|+++|..+..+.++.+...+....|.|.++..+|+|.|+|.|.|..|.....+.+
T Consensus 393 ~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l 472 (570)
T 3b43_A 393 PVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSI 472 (570)
T ss_dssp CEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred ceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEE
Confidence 34567899999999999999999999999999988888888777777899999999999999999999999999999999
Q ss_pred EecCCCC---CCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeC-CCCceEEeceeeeeEEEEcCcccCceEEE
Q psy12425 477 QISDRPD---PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREH-PMSSWIRVGNTRFTTMAITGLSPGHQYEF 552 (591)
Q Consensus 477 ~v~~~p~---~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~ 552 (591)
.+..+|. .+..+ ....+..+.|.|...... ...+.+|.-..... ...............|.|.++.+.+.+.|
T Consensus 473 ~v~~~P~~~~~~~~~--~~~~g~~~~l~c~~~g~p-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 549 (570)
T 3b43_A 473 TLKAPPRFVKKLSDI--STVVGEEVQLQATIEGAE-PISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKY 549 (570)
T ss_dssp EECCCCEEEECCCCB--CCBTTCCEEEEEEEESCS-SCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEE
T ss_pred EeccCCcccccCCCc--eecCCCeEEEEEEEecCC-CCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEE
Confidence 9988774 22222 223456788888753211 11233332111111 11122222233456899999999999999
Q ss_pred EEEEEcCCcCCCCC
Q psy12425 553 RVYAENVYGRSDPS 566 (591)
Q Consensus 553 ~v~A~n~~G~~~~s 566 (591)
+|.|.|.+|....+
T Consensus 550 ~C~a~N~~G~~~~~ 563 (570)
T 3b43_A 550 TCQIKNEAGTQECF 563 (570)
T ss_dssp EEEEECSSCEEEEE
T ss_pred EEEEEECCcEEEEE
Confidence 99999999976544
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=4.2e-47 Score=377.45 Aligned_cols=455 Identities=18% Similarity=0.282 Sum_probs=336.8
Q ss_pred ceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEE
Q psy12425 3 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 82 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~ 82 (591)
.++.+.+|+++.|.|.+.|.|++.|.|+|||+.+....+++.....+..+|.|.++..+|+|.|+|.|.|..|....+..
T Consensus 109 ~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 188 (570)
T 3b43_A 109 KDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAK 188 (570)
T ss_dssp CCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEE
Confidence 45678899999999999999999999999999998887777666677789999999999999999999999999888888
Q ss_pred EEEecCCCCCC---CCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEE
Q psy12425 83 INITGLPGPPI---GPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEY 159 (591)
Q Consensus 83 l~v~~~p~~p~---~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 159 (591)
+.|.....+|. .|..+....+..+.|.|...... ...+.||.-. .......-...........+.|.++...+.+
T Consensus 189 l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p-~p~i~W~k~g-~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G 266 (570)
T 3b43_A 189 LTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTA-PIKITWAKDN-REIRPGGNYKMTLVENTATLTVLKVTKGDAG 266 (570)
T ss_dssp EEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSS-CCEEEEEETT-EECCTTSSEEEEEETTEEEEEESSBCGGGCE
T ss_pred EEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECC-CCEEEEEECC-EECcCCCcEEEEEECCEEEEEEcccCcccCE
Confidence 88876544433 23333445677888888743211 1123322211 1111111122222334567999999999999
Q ss_pred EEEEEEEccCCCCCCCCccCcccccCCCCCCCC--CCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccE
Q psy12425 160 LFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP--PGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQ 237 (591)
Q Consensus 160 ~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~ 237 (591)
.|+|.|.|..|........ .... +|.. ..........+..+.|.|.....+. ..+.+| ............
T Consensus 267 ~Y~C~a~N~~g~~~~~~~l---~V~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~-p~v~W~-k~~~~l~~~~~~ 338 (570)
T 3b43_A 267 QYTCYASNVAGKDSCSAQL---GVQE---PPRFIKKLEPSRIVKQDEHTRYECKIGGSPE-IKVLWY-KDETEIQESSKF 338 (570)
T ss_dssp EEEEEEEETTEEEEEEEEE---CCBC---CCEEEECCCSBCCEESSCEEEEEEEEESSSS-CEEEEE-ETTEECCCSSSE
T ss_pred EEEEEEECCCCcEEEEEEE---Eeec---CCcccccCCCccEEcCCCcEEEEEEEeeCCC-CEEEEe-ECCEECCCCCcE
Confidence 9999999988764322211 1111 1110 0011223456788999998753322 122222 111111111111
Q ss_pred EEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEc
Q psy12425 238 RVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT 317 (591)
Q Consensus 238 ~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~ 317 (591)
... .......|.|.++...|.|.|+|.|.|..|... ....+.+. .+|.+...+....+.+|+.+.|.|.+.
T Consensus 339 ~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~---~~~~l~V~-----~~P~~~~~~~~~~~~~G~~v~l~C~~~ 409 (570)
T 3b43_A 339 RMS-FVESVAVLEMYNLSVEDSGDYTCEAHNAAGSAS---SSTSLKVK-----EPPVFRKKPHPVETLKGADVHLECELQ 409 (570)
T ss_dssp EEE-EETTEEEEEEESCCGGGCEEEEEEEEBTTBCCE---EEEEECEE-----CCCEECSCCCCEEECTTCCEEEEEEEE
T ss_pred EEE-EECCEEEEEECCCCcccCEEEEEEEEeCCCEEE---EEEEEEec-----CCCeeecCCCceeecCCCEEEEEEEEe
Confidence 221 122346799999999999999999999988643 23344443 578887777777888999999999999
Q ss_pred CCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccc
Q psy12425 318 GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDT 397 (591)
Q Consensus 318 ~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~ 397 (591)
|.|.+.+.|++++..+..+.++.+..++...+|.|.++..+|+|.|+|.|.|..|.......|.|..+|.+...+. .
T Consensus 410 g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~---~ 486 (570)
T 3b43_A 410 GTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLS---D 486 (570)
T ss_dssp SSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCC---C
T ss_pred cCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCC---C
Confidence 9999999999999999888888888888888999999999999999999999999999999999999988765542 3
Q ss_pred eeecCCCeEEEEEeeeccCCCeEEEeeCCeEe-eeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEE
Q psy12425 398 AYFDKGENVVVKIPFTGYPKPKITWYRDNEVI-ESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKI 476 (591)
Q Consensus 398 ~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~ 476 (591)
..+..|+.+.|.|.+.|.|.+.+.|++++..+ .....+.+...+....|.|.++..+|+|.|+|.|.|..|..+..+.|
T Consensus 487 ~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L 566 (570)
T 3b43_A 487 ISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATL 566 (570)
T ss_dssp BCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEE
T ss_pred ceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEE
Confidence 45678999999999999999999999998654 34556667666778999999999999999999999999999999988
Q ss_pred Eec
Q psy12425 477 QIS 479 (591)
Q Consensus 477 ~v~ 479 (591)
.|.
T Consensus 567 ~V~ 569 (570)
T 3b43_A 567 SVL 569 (570)
T ss_dssp CCB
T ss_pred EEe
Confidence 774
No 3
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=5e-43 Score=355.00 Aligned_cols=505 Identities=12% Similarity=0.164 Sum_probs=340.9
Q ss_pred eeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeee-EEEEEE
Q psy12425 5 LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV-SGTFTI 83 (591)
Q Consensus 5 ~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~-~~~~~l 83 (591)
..+.+|+.+.|.|.+.+ |.+.+.|+|+|..+..+.++.+.. +...|.|.+++.+|+|.|+|.|.|..|.. +..+.|
T Consensus 121 ~~v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l 197 (642)
T 1e07_A 121 KPVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLSN--GNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVIL 197 (642)
T ss_pred eeEecCCcEEEEEECCC-CCeeEEEEECCeECCCCCceEEcC--CCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEE
Confidence 45788999999999998 899999999999998777665543 34589999999999999999999988865 456888
Q ss_pred EEecCCCCCCC-CcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEE
Q psy12425 84 NITGLPGPPIG-PLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFH 162 (591)
Q Consensus 84 ~v~~~p~~p~~-~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~ 162 (591)
.|...|..+.. +.......+..+.|.|... +.+...+.+.+. +. . ......+.|.++...+.+.|+
T Consensus 198 ~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~----g~p~~~i~W~~~--g~----~---i~~~~~L~i~~~~~~d~G~Y~ 264 (642)
T 1e07_A 198 NVLYGPDAPTISPLNTSYRSGENLNLSCHAA----SNPPAQYSWFVN--GT----F---QQSTQELFIPNITVNNSGSYT 264 (642)
T ss_pred EEEeCCCCcEEecCCcccccCCEEEEEEEcC----CCCCcEEEEEEC--Ce----E---cccCCceEEecccccCCeEEE
Confidence 88876655432 2233445678899999852 222222333221 10 0 113456889999999999999
Q ss_pred EEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEee
Q psy12425 163 VMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA 242 (591)
Q Consensus 163 ~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 242 (591)
|.|.|..|....+.... +....+...|............++.+.|.|.....+ ..+.+| .......... +...
T Consensus 265 C~a~n~~g~~~~s~~~~-v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~~~~p--~~v~W~-~~g~~l~~~~--~~~~- 337 (642)
T 1e07_A 265 CQAHNSDTGLNRTTVTT-ITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQN--TTYLWW-VNNQSLPVSP--RLQL- 337 (642)
T ss_pred EEEEeCCCceEEeeeEE-EEEEccCCCCEEEcCCceeEecCCcEEEEEECCCCC--ccEEEE-ECCccCCCcC--CEEE-
Confidence 99999887643322211 111111111111111122334467799999875322 122222 1111111111 1111
Q ss_pred ecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCC
Q psy12425 243 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP 322 (591)
Q Consensus 243 ~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~ 322 (591)
......|.|.++...|.|.|+|.|.|..|.... ....+.+.. .|+.....+....+.+|+.+.|.|.+.|.|.+
T Consensus 338 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s--~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 411 (642)
T 1e07_A 338 SNDNRTLTLLSVTRNDVGPYECGIQNELSVDHS--DPVILNVLY----GPDDPTISPSYTYYRPGVNLSLSCHAASNPPA 411 (642)
T ss_pred eCCCCEEEEeccCcccCeeEEEEEeCCCCCcce--eeEEEEEEc----CCCCCeecCCceEecCCCcEEEEEEcCccCCC
Confidence 123578999999999999999999998875322 223444431 12222334455678899999999999999999
Q ss_pred eeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeee--EEEEec---CCcccCCCCcccc
Q psy12425 323 TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA--ELIIMT---APKFNVPPRFRDT 397 (591)
Q Consensus 323 ~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~--~l~v~~---~p~~~~~~~~~~~ 397 (591)
.+.|++++..+... ..|.|.++..+|.|.|+|.|.|..|....+. .+.|.. +|.+.. ...
T Consensus 412 ~i~W~~~g~~~~~~-----------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~----~~~ 476 (642)
T 1e07_A 412 QYSWLIDGNIQQHT-----------QELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISS----NNS 476 (642)
T ss_pred eEEEEECCEEcCCC-----------ceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEec----CCc
Confidence 99999998776532 2599999999999999999999998776554 444443 222222 123
Q ss_pred eeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc-ceEEEE
Q psy12425 398 AYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKI 476 (591)
Q Consensus 398 ~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~ 476 (591)
..+..|+.+.|.|.+.+ |.+.+.|+++|..+....++.+.. ....|.|.++...|+|.|+|.|.|..|.. +..+.|
T Consensus 477 ~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l 553 (642)
T 1e07_A 477 KPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLSN--GNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTL 553 (642)
T ss_pred eeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEcC--CCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEE
Confidence 45678999999999994 889999999999988777666543 35689999999999999999999999986 446888
Q ss_pred EecCCCCCCCCC--eeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEE
Q psy12425 477 QISDRPDPPQFP--TVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRV 554 (591)
Q Consensus 477 ~v~~~p~~p~~~--~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v 554 (591)
.|..+|..+... ......+..+.|.|.... . +... +.|...+. .+. ....+.|.++.+.+.+.|+|
T Consensus 554 ~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g---~-p~p~--v~W~~~g~----~i~--~~~~L~i~~~~~~d~G~Y~C 621 (642)
T 1e07_A 554 DVLYGPDTPIISPPDSSYLSGANLNLSCHSAS---N-PSPQ--YSWRINGI----PQQ--HTQVLFIAKITPNNNGTYAC 621 (642)
T ss_pred EEEeCCCcceecCCceeEEcCCcEEEEEEecc---C-CCCe--EEEEECCE----ECc--cCceEEECcccccCCeEEEE
Confidence 888666433210 122234567888888532 1 1112 22222211 011 12479999999999999999
Q ss_pred EEEcCCcCCCCCCC
Q psy12425 555 YAENVYGRSDPSTT 568 (591)
Q Consensus 555 ~A~n~~G~~~~s~~ 568 (591)
.|.|.+|....+..
T Consensus 622 ~a~N~~G~~~~s~~ 635 (642)
T 1e07_A 622 FVSNLATGRNNSIV 635 (642)
T ss_pred EEEecccCcceeEE
Confidence 99999998765544
No 4
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.1e-43 Score=370.19 Aligned_cols=518 Identities=16% Similarity=0.176 Sum_probs=351.8
Q ss_pred eeeeecCCeEEEEEEeccCCCceEEEEE-CCEEeecCCceeEEEeCCeEEEEEcccCCCC------ceEEEEEEEcCCee
Q psy12425 4 ALYIPEGDNTKVKIFYAGDQPMEVSLTK-NGRVVQSDDRFKFTVLDDYIIIFIKEIRKED------AGDYTVNLSNSSGS 76 (591)
Q Consensus 4 ~~~v~~G~~~~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d------~g~Y~c~~~n~~g~ 76 (591)
.+.+.+|+.+.|.|.+.|.|.|.+.|+| ||..+....+......+ .+|.|.++...| +|.|+|.|.|..|.
T Consensus 48 ~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~~~~~~--g~l~i~~~~~~~~~~~~d~G~Y~C~a~n~~G~ 125 (816)
T 3dmk_A 48 RIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSD--GKLVFPPFRAEDYRQEVHAQVYACLARNQFGS 125 (816)
T ss_dssp EEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECST--TEEEECCCCGGGCCHHHHEEEEEEEEEETTEE
T ss_pred eEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceEEEeeC--CcEEEcCCChHHccccccceEEEEEEecCcce
Confidence 4678999999999999999999999999 89888655443333333 379999998887 89999999999998
Q ss_pred e-EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecC----------CCceEEEEeecCc
Q psy12425 77 V-SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS----------MPHWICISTTCHD 145 (591)
Q Consensus 77 ~-~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~----------~~~~~~~~~~~~~ 145 (591)
. +..+.|.+...+.....+..+....+..+.|.|..+..... ... .+.|...+ ..... ....
T Consensus 126 ~~S~~~~v~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~-~~~--~v~W~~~~~~~~~~~~~~~~r~~----~~~~ 198 (816)
T 3dmk_A 126 IISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVAD-FVE--VVSWHTDEEENYFPGAEYDGKYL----VLPS 198 (816)
T ss_dssp EEEEEEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCHHHHT-TEE--EEEEEETTSCEECBSSCBTTTEE----ECTT
T ss_pred EEccceEEEEEEccccEEEEecceEecCceEEEEECCCccccc-cEE--EEEEEecCceEeccccCCCceEE----EecC
Confidence 7 56677777666555544455667789999999987542111 111 12222111 11111 1245
Q ss_pred ceEEEcCCcCCcE-EEEEEEEEccCCCCCC-CCccCcccccCCCC--CCCCCCC---CeEEeecCCeEEEEEecCCCCCC
Q psy12425 146 TTFIVQGLTEGQE-YLFHVMAVNENGMGPP-LEGINPIKAKSPYD--KPSPPGI---PVVTQVGGDFVNLSWDKPLDDGG 218 (591)
Q Consensus 146 ~~~~i~~l~~~~~-y~~~~~a~n~~g~~~~-~~~~~~~~~~~~~~--~p~~~~~---~~~~~~~~~~v~l~w~~~~~~~~ 218 (591)
..+.|.++.+.+. +.|+|.+.+..+.... +.....+....+.. .|..... .......+..++|.|.....+.
T Consensus 199 g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~~~~~~~~~~v~~g~~v~L~C~~~g~p~- 277 (816)
T 3dmk_A 199 GELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPV- 277 (816)
T ss_dssp SCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSCCCCBCCGGGGEEEEEECTTSCEEECCCCBCSSC-
T ss_pred ceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCCCCCccccccCccceEEeCCCeEEEEEEeeecCC-
Confidence 5799999999998 9999999975433211 11111111111111 1111111 1345567889999998753221
Q ss_pred cceEEEEEEeeecCCCccEEE---EeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeE
Q psy12425 219 SRIQGYWIDKHEVGSDAWQRV---NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 295 (591)
Q Consensus 219 ~~~~~y~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~ 295 (591)
..+.+|.. ..+....... .........|.|.++...|.|.|+|.|.|..|... ....+.+. .+|.+
T Consensus 278 p~v~W~k~---~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~---~~~~l~V~-----~~~~~ 346 (816)
T 3dmk_A 278 PVFRWYKF---IEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGES---VETVLTVT-----APLSA 346 (816)
T ss_dssp CEEEEEEE---CTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEE---EEEEEEEC-----EEEEE
T ss_pred CeEEEEeC---CCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCceE---EEEEEEEc-----CCCce
Confidence 22333321 0000000000 00011246899999999999999999999887532 33444544 34556
Q ss_pred EeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCccee
Q psy12425 296 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 375 (591)
Q Consensus 296 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~ 375 (591)
...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ..|.|.++..+|+|.|+|.|.|..|...
T Consensus 347 ~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~----------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 416 (816)
T 3dmk_A 347 KIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSE----------SVLRIESVKKEDKGMYQCFVRNDRESAE 416 (816)
T ss_dssp EEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred eeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCC----------CEEEEcCCCHHHCEEEEEEEECCCCcEE
Confidence 666667778999999999999999999999999998875432 2699999999999999999999999888
Q ss_pred eeeEEEEe---cCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEe-----cCCeeEEE
Q psy12425 376 TKAELIIM---TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET-----SERHAILT 447 (591)
Q Consensus 376 ~~~~l~v~---~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-----~~~~~~l~ 447 (591)
....+.|. .+|.+...+ ....+..|+.+.|.|.+.|.|.+.+.|+++|..+.....+.... ......|.
T Consensus 417 ~~~~l~v~~~~~~p~i~~~~---~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~ 493 (816)
T 3dmk_A 417 ASAELKLGGRFDPPVIRQAF---QEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLN 493 (816)
T ss_dssp ECCEEECCCSSCCCEEEEEC---CCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEE
T ss_pred EEEEEEEccccCCCceEecC---cceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEE
Confidence 77787774 344433222 23467889999999999999999999999999987766655432 12346799
Q ss_pred EeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCC--
Q psy12425 448 IRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM-- 525 (591)
Q Consensus 448 i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~-- 525 (591)
|.++..+|+|.|+|.|.|..|.....+.+.|..+|............+..+.|.|.... .+...+ .|...+.
T Consensus 494 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g----~p~~~i--~W~k~~~~l 567 (816)
T 3dmk_A 494 ITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAG----YPIDSI--VWERDNRAL 567 (816)
T ss_dssp ESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEEC----SSEEEE--EEEETTEES
T ss_pred EeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecC----CCCCEE--EEEECCeEc
Confidence 99999999999999999999999999999998877432222233346778999998532 232223 3322211
Q ss_pred --CceEEeceeeeeEEEEcCcc-cCceEEEEEEEEcCCcCC
Q psy12425 526 --SSWIRVGNTRFTTMAITGLS-PGHQYEFRVYAENVYGRS 563 (591)
Q Consensus 526 --~~~~~~~~~~~~~~~i~~l~-~~~~Y~~~v~A~n~~G~~ 563 (591)
....... ....+.|.++. ..+.+.|+|.|.|..|.+
T Consensus 568 ~~~~~~~~~--~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~ 606 (816)
T 3dmk_A 568 PINRKQKVF--PNGTLIIENVERNSDQATYTCVAKNQEGYS 606 (816)
T ss_dssp CCSTTEEEC--TTSEEEESSCCHHHHCEEEEEEEEESSSCE
T ss_pred ccCCceEEe--cCCeEEEEecCccccCEEEEEEEEECCCce
Confidence 1111111 12378999997 689999999999999864
No 5
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=1.9e-41 Score=343.49 Aligned_cols=516 Identities=14% Similarity=0.164 Sum_probs=332.9
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCC-----------------ceeEEEeCCeEEEEEcccCCCCce
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD-----------------RFKFTVLDDYIIIFIKEIRKEDAG 64 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~-----------------~~~~~~~~~~~~l~i~~~~~~d~g 64 (591)
|.++.+.+|++++|.|...+.+...+.|+|+........ +.+.... ...+|.|.+++.+|+|
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~-~~~sL~I~~v~~~D~G 84 (642)
T 1e07_A 6 STPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIY-PNASLLIQNIIQNDTG 84 (642)
T ss_pred ccCCcccccccEEEEEccCCCCceEEEEECCcccCCcceEEEEEccccccccCccccCceeec-cCCcEEECCCCcccCc
Confidence 678899999999999998777778999999543211100 0011111 1248999999999999
Q ss_pred EEEEEEEcCC-eeeEEEEEEEEecCCCCCCCCc--ceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEe
Q psy12425 65 DYTVNLSNSS-GSVSGTFTINITGLPGPPIGPL--DVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST 141 (591)
Q Consensus 65 ~Y~c~~~n~~-g~~~~~~~l~v~~~p~~p~~~~--~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 141 (591)
.|+|.+.+.. +.....+.|.|...+..|.... ......+..+.|.|.... ....+.||.- .......... ..
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~--p~~~v~W~~~-g~~l~~~~~~--~~ 159 (642)
T 1e07_A 85 FYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPET--QDATYLWWVN-NQSLPVSPRL--QL 159 (642)
T ss_pred EEEEEEEcCCCeEEEEEEEEEecccCCCCcEEccCceeEecCCcEEEEEECCC--CCeeEEEEEC-CeECCCCCce--EE
Confidence 9999998864 4446677888887655554211 122345677999998543 1222333221 1111111111 11
Q ss_pred ecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcce
Q psy12425 142 TCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRI 221 (591)
Q Consensus 142 ~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~ 221 (591)
......+.|.++...+.+.|+|.|.|..|..... .........+..+...| .......|..++|.|.....+. ..+
T Consensus 160 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~-~~~l~V~~~p~~~~~~~--~~~~~~~G~~~~l~C~~~g~p~-~~i 235 (642)
T 1e07_A 160 SNGNRTLTLFNVTRNDTASYKCETQNPVSARRSD-SVILNVLYGPDAPTISP--LNTSYRSGENLNLSCHAASNPP-AQY 235 (642)
T ss_pred cCCCCEEEEeCCCcccCeeEEEEEecCCCCcccc-eEEEEEEeCCCCcEEec--CCcccccCCEEEEEEEcCCCCC-cEE
Confidence 2235689999999999999999999987753221 11111111111000011 1223456889999998732221 122
Q ss_pred EEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccc
Q psy12425 222 QGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRN 301 (591)
Q Consensus 222 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~ 301 (591)
.+| ...........|.|.++...|.|.|+|.|.|..|....+ ....+.+.. .+.+|.+... ..
T Consensus 236 ~W~-------------~~g~~i~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s-~~~~v~v~~--~~~~p~i~~~-~~ 298 (642)
T 1e07_A 236 SWF-------------VNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRT-TVTTITVYA--EPPKPFITSN-NS 298 (642)
T ss_pred EEE-------------ECCeEcccCCceEEecccccCCeEEEEEEEeCCCceEEe-eeEEEEEEc--cCCCCEEEcC-Cc
Confidence 222 111111235679999999999999999999988754322 233444432 1233444332 23
Q ss_pred cceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eeeeEE
Q psy12425 302 ANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKAEL 380 (591)
Q Consensus 302 ~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~~l 380 (591)
..+..|+.+.|.|.+.+.| +.+.|++++..+....++.+...+ .+|.|.++..+|+|.|+|.|.|..|.. +..+.|
T Consensus 299 ~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l 375 (642)
T 1e07_A 299 NPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDN--RTLTLLSVTRNDVGPYECGIQNELSVDHSDPVIL 375 (642)
T ss_pred eeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCC--CEEEEeccCcccCeeEEEEEeCCCCCcceeeEEE
Confidence 3345578899999999987 699999999988777776665443 379999999999999999999999875 456788
Q ss_pred EEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEE
Q psy12425 381 IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYR 460 (591)
Q Consensus 381 ~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~ 460 (591)
.|..+|...... .....+..|+.+.|.|.+.|.|.+.+.|+++|..+.. ...|.|.++...|.|.|+
T Consensus 376 ~V~~~p~~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~-----------~~~L~i~~~~~~d~G~Y~ 442 (642)
T 1e07_A 376 NVLYGPDDPTIS--PSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQH-----------TQELFISNITEKNSGLYT 442 (642)
T ss_pred EEEcCCCCCeec--CCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCC-----------CceEEEccCChhhCeEEE
Confidence 888777543211 1334678999999999999999999999999977642 356999999999999999
Q ss_pred EEEEcCCCccceE--EEEEecCCCCCCCCC---eeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceee
Q psy12425 461 VVAENDLGMDSAI--VKIQISDRPDPPQFP---TVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTR 535 (591)
Q Consensus 461 c~a~n~~g~~~~~--~~~~v~~~p~~p~~~---~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~ 535 (591)
|.|.|..|....+ +.+.+..++.+|... ......+..+.|.|.... ....+.+|.- ............. ..
T Consensus 443 C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~--~~~~i~W~~~-g~~l~~~~~~~~~-~~ 518 (642)
T 1e07_A 443 CQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEA--QNTTYLWWVN-GQSLPVSPRLQLS-NG 518 (642)
T ss_pred EEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCC--CCcEEEEEEC-CEeCCCCCcEEEc-CC
Confidence 9999999877544 556666554444321 112235678999998641 1112222221 1111111111111 12
Q ss_pred eeEEEEcCcccCceEEEEEEEEcCCcCCC
Q psy12425 536 FTTMAITGLSPGHQYEFRVYAENVYGRSD 564 (591)
Q Consensus 536 ~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~ 564 (591)
...|.|.++...+.+.|+|.|.|..|...
T Consensus 519 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 547 (642)
T 1e07_A 519 NRTLTLFNVTRNDARAYVCGIQNSVSANR 547 (642)
T ss_pred CcEEEEeecChhcCceEEEEeEcCCCCcc
Confidence 35899999999999999999999999643
No 6
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=7.8e-43 Score=363.64 Aligned_cols=523 Identities=15% Similarity=0.188 Sum_probs=349.2
Q ss_pred ceeeeecCCeEEEEEEeccCCCceEEEEECCEE------eecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCee
Q psy12425 3 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRV------VQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS 76 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~ 76 (591)
..+.+.+|+++.|.|.+.|.|.+.+.|+|++.. +....+. .... .+|.|.+++.+|+|.|+|.|.|..|.
T Consensus 256 ~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~--~~~~--~~L~i~~v~~~D~G~Y~C~a~n~~g~ 331 (816)
T 3dmk_A 256 DMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRV--KQVS--GTLIIKDAVVEDSGKYLCVVNNSVGG 331 (816)
T ss_dssp EEEEECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSE--EEET--TEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred cceEEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCce--Eecc--ceEEECCCCHhHCEEEEEEEEcCCCc
Confidence 356789999999999999999999999995432 1122222 2222 38999999999999999999999998
Q ss_pred eEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCC
Q psy12425 77 VSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEG 156 (591)
Q Consensus 77 ~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 156 (591)
.+..+.|.|..+|.....+.......+..+.|.|.... .+...+.+.+ .+. ........+.|.++...
T Consensus 332 ~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g----~p~~~v~W~k--~g~------~~~~~~~~L~i~~v~~~ 399 (816)
T 3dmk_A 332 ESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTG----NPIKTVSWMK--DGK------AIGHSESVLRIESVKKE 399 (816)
T ss_dssp EEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEE----ECCCEEEEEE--TTE------ECSCCSSEEEESSCCGG
T ss_pred eEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEec----cCCCEEEEEE--CCE------ECCCCCCEEEEcCCCHH
Confidence 88888888876554333333444556778888886421 1111222211 110 00123567999999999
Q ss_pred cEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCC-CCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCc
Q psy12425 157 QEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG-IPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 235 (591)
Q Consensus 157 ~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~ 235 (591)
+.+.|+|.|.|..|....... +.......+|.... ........+..+.|.|.....+. ..+. |...........
T Consensus 400 d~G~Y~C~a~n~~g~~~~~~~---l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~-p~v~-W~~~g~~l~~~~ 474 (816)
T 3dmk_A 400 DKGMYQCFVRNDRESAEASAE---LKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPT-PEIS-WELDGKKIANND 474 (816)
T ss_dssp GCEEEEEEEECSSCEEEECCE---EECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSC-CEEE-EEETTEECCSCT
T ss_pred HCEEEEEEEECCCCcEEEEEE---EEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCC-CEEE-EEECCEECCCCC
Confidence 999999999998775333221 11111111111100 11233456888999997643222 1222 222222222222
Q ss_pred cEEEEeeecC----CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEE
Q psy12425 236 WQRVNVAICA----PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQ 311 (591)
Q Consensus 236 ~~~~~~~~~~----~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 311 (591)
.......... ...|.|.++...|.|.|+|.|.|..|... ....+.+. .+|.+ ..+....+..|+.+.
T Consensus 475 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~---~~~~l~V~-----~~p~~-~~~~~~~v~~G~~v~ 545 (816)
T 3dmk_A 475 RYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAE---HSAKLNVY-----GLPYI-RQMEKKAIVAGETLI 545 (816)
T ss_dssp TEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEE---EEEEEEEC-----SSCEE-CCCCCEEEETTCCEE
T ss_pred CcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEE---EEEEEEEe-----cCCee-EccCCeEEecCCeEE
Confidence 2222111111 13589999999999999999999887543 34455554 34443 333456678999999
Q ss_pred EEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEccee-cccceEEEEEEEeCCcce-eeeeEEEEecCCccc
Q psy12425 312 FQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVY-GVDADEYVCRAVNKGGVK-STKAELIIMTAPKFN 389 (591)
Q Consensus 312 l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~c~a~n~~g~~-~~~~~l~v~~~p~~~ 389 (591)
|.|.+.+.|.+.+.|++++..+....+..+..++ +|.|.++. ..|+|.|+|.|.|..|.. .....+.+..+|.+.
T Consensus 546 l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~---~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~ 622 (816)
T 3dmk_A 546 VTCPVAGYPIDSIVWERDNRALPINRKQKVFPNG---TLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRII 622 (816)
T ss_dssp EECCEECSSEEEEEEEETTEESCCSTTEEECTTS---EEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCB
T ss_pred EEEEecCCCCCEEEEEECCeEcccCCceEEecCC---eEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccc
Confidence 9999999999999999999988777666655444 79999998 689999999999998865 456778888777654
Q ss_pred CCCCcccceeecCCCeEEEEEeeeccCCC-eEEEeeCCeEeeeccceEEE-ecCCeeEEEEeccCCCcceeEEEEEEcCC
Q psy12425 390 VPPRFRDTAYFDKGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVE-TSERHAILTIRDASNVDTAPYRVVAENDL 467 (591)
Q Consensus 390 ~~~~~~~~~~~~~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~~~g~y~c~a~n~~ 467 (591)
.... ....+..|+.+.|.|.+.+.+.+ .+.|+++|..+.....+... .......|.|.++..+|+|.|+|.|.|..
T Consensus 623 ~~~~--~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 700 (816)
T 3dmk_A 623 PFAF--EEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLA 700 (816)
T ss_dssp CCCC--CSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSS
T ss_pred cccc--cccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCC
Confidence 3221 23446789999999999866554 99999999988665555444 33467899999999999999999999999
Q ss_pred CccceEEEEEecCCCC---CCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCC-CceEEe-----ceeeeeE
Q psy12425 468 GMDSAIVKIQISDRPD---PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM-SSWIRV-----GNTRFTT 538 (591)
Q Consensus 468 g~~~~~~~~~v~~~p~---~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~-~~~~~~-----~~~~~~~ 538 (591)
|..+..+.|.|..+|. .|.... ...+..+.|.|..... +...+.+....... ...... .......
T Consensus 701 g~~~~~~~l~V~~~P~~~~~~~~~~--v~~G~~v~l~C~~~g~----P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~ 774 (816)
T 3dmk_A 701 GHQQFTTPLNVYVPPRWILEPTDKA--FAQGSDAKVECKADGF----PKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGT 774 (816)
T ss_dssp CEEEEEEEECEEEEEEEEECCCCEE--EETTCCEEEECEEEEE----SCCEEECCEECSSSTTCCBCCCCBTTEEEETTE
T ss_pred ccEEEEEEEEEEeCCceeeecccce--ecCCCcEEEEEEEecC----CCCeEEEEecCCCCCccccccccCCCEEecCCE
Confidence 9999999999887763 333322 2346678888875321 11122222111000 000000 0112347
Q ss_pred EEEcCcccCceEEEEEEEEcCCcCCCCC
Q psy12425 539 MAITGLSPGHQYEFRVYAENVYGRSDPS 566 (591)
Q Consensus 539 ~~i~~l~~~~~Y~~~v~A~n~~G~~~~s 566 (591)
+.|.++...+.+.|+|.|.|.+|.+..+
T Consensus 775 L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 802 (816)
T 3dmk_A 775 LHVDNIQKTNEGYYLCEAINGIGSGLSA 802 (816)
T ss_dssp EEECSCCGGGCEEEEEEEECSSSSCEEE
T ss_pred EEECcCChhhCeEEEEEEEeCCCCCcEE
Confidence 9999999999999999999999976554
No 7
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=2.4e-40 Score=331.89 Aligned_cols=458 Identities=14% Similarity=0.134 Sum_probs=308.7
Q ss_pred CceeeeecCCeEEEEEEeccCCCc---eEEEEECCEEe-----e---------cCCceeEEE--eCCeEEEEEcccCCCC
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPM---EVSLTKNGRVV-----Q---------SDDRFKFTV--LDDYIIIFIKEIRKED 62 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~---~v~W~~~~~~~-----~---------~~~~~~~~~--~~~~~~l~i~~~~~~d 62 (591)
|+.+.+.+|+++.|.|.+.+.|.+ .+.|+|++..+ . ...|+.+.. .++..+|.|.+++.+|
T Consensus 7 P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D 86 (585)
T 2ocw_A 7 PEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDD 86 (585)
T ss_pred cceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCccc
Confidence 788999999999999999987644 89999998532 1 123444443 2345689999999999
Q ss_pred ceEEEEEEEcCCeeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEec----C------
Q psy12425 63 AGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI----S------ 132 (591)
Q Consensus 63 ~g~Y~c~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~----~------ 132 (591)
+|.|+|.|.|..|..+..+.|.|...|.....+.......+..+.|.|..........+.||.-..... .
T Consensus 87 ~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~ 166 (585)
T 2ocw_A 87 SGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVN 166 (585)
T ss_pred CEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccC
Confidence 999999999998888888999999988766555556667888999999754321112244433210000 0
Q ss_pred ---CCceEEEEee---cCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeE
Q psy12425 133 ---MPHWICISTT---CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFV 206 (591)
Q Consensus 133 ---~~~~~~~~~~---~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v 206 (591)
.... .+... .....+.|.++...+.+.|+|.|.|..|....... +.+.. + +| ..+....+..+
T Consensus 167 ~~~~~r~-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~---l~V~~---~--~p--~~~~~~~G~~v 235 (585)
T 2ocw_A 167 PNYTGRI-RLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNAD---LQVLK---P--EP--ELVYEDLRGSV 235 (585)
T ss_pred ccccCcE-EEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEE---EEEcc---C--CC--ceeEEcCCCcE
Confidence 0011 11111 11237999999999999999999988775432221 11111 1 11 12334568889
Q ss_pred EEEEecCCCCCCcceEEEEEEeeec----------C-----CCccEEEEee-ecCCceeeecCcccCCcEEEEEEEEcCC
Q psy12425 207 NLSWDKPLDDGGSRIQGYWIDKHEV----------G-----SDAWQRVNVA-ICAPSQINIPNLIEGRQYEFRVYAQNEA 270 (591)
Q Consensus 207 ~l~w~~~~~~~~~~~~~y~~~~~~~----------~-----~~~~~~~~~~-~~~~~~~~i~~l~~~~~~~y~c~a~n~~ 270 (591)
.|.|.... +....+..+|. .... + .......... ......|.|.++...|.|.|+|.|.|.
T Consensus 236 ~l~C~~~~-~~~~~~~~~w~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~- 312 (585)
T 2ocw_A 236 TFHCALGP-EVANVAKFLCR-QSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD- 312 (585)
T ss_pred EEEEEcCC-CCCCceEEEEE-eCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-
Confidence 99998521 11111222221 0100 0 0000111100 011127999999999999999999995
Q ss_pred CCCCCC--CCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCee----EEec--CCc--cCCC-----
Q psy12425 271 GLSLPS--SASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTI----SWLK--GSR--EITP----- 335 (591)
Q Consensus 271 g~~~~s--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v----~W~~--~~~--~~~~----- 335 (591)
|....+ .....+.+. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+ .|++ ++. .+..
T Consensus 313 g~~~~~~~~~~~~l~V~-----~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~ 387 (585)
T 2ocw_A 313 GQLQEGSPIQAWQLFVN-----EESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWV 387 (585)
T ss_pred CCccccCceeeEEEEEe-----cccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeeccee
Confidence 433221 133445554 4566666667778899999999999999999877 7999 776 3322
Q ss_pred ----CCceEEEE--eCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEE
Q psy12425 336 ----SARHHIFA--EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVK 409 (591)
Q Consensus 336 ----~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~ 409 (591)
..++.+.. ..+..+|.|.++..+|+|.|+|.| |..|.....+.|.|...|.....+ ....+..|+.+.|.
T Consensus 388 ~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~---~~~~v~~G~~v~L~ 463 (585)
T 2ocw_A 388 KAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVP---GNVTAVLGETLKVP 463 (585)
T ss_pred ecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccC---CceeEecCCcEEEE
Confidence 23444432 234456999999999999999999 988888888999998754433322 34567899999999
Q ss_pred Eeee----ccCCCeEEEeeCCeEeeeccc-------eEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccc-eEEEEE
Q psy12425 410 IPFT----GYPKPKITWYRDNEVIESGGH-------FHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDS-AIVKIQ 477 (591)
Q Consensus 410 c~~~----~~p~~~v~W~~~~~~~~~~~~-------~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~-~~~~~~ 477 (591)
|.+. +.|.+.+.|+++|..+..... ..+...+....|+|.++..+|+|.|+|.|.|..|... ..+.|.
T Consensus 464 C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~ 543 (585)
T 2ocw_A 464 CHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVA 543 (585)
T ss_pred EEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEE
Confidence 9997 778889999999987754321 1112234457999999999999999999999999775 448899
Q ss_pred ecCCC
Q psy12425 478 ISDRP 482 (591)
Q Consensus 478 v~~~p 482 (591)
|..+|
T Consensus 544 V~~~p 548 (585)
T 2ocw_A 544 VEERK 548 (585)
T ss_pred EEeee
Confidence 98877
No 8
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=299.78 Aligned_cols=294 Identities=37% Similarity=0.613 Sum_probs=255.0
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCC-CceEEE-EeCCeEEEEEcceecccceEEEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS-ARHHIF-AEGDTYTLIINSVYGVDADEYVCRA 367 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~-~~~~~~-~~~~~~~l~i~~~~~~d~g~y~c~a 367 (591)
+.+|.+...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+... .++.+. ..++..+|.|.+++.+|+|.|+|.|
T Consensus 2 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 35788888888899999999999999999999999999999887654 345544 3456679999999999999999999
Q ss_pred EeCCcceeeeeEEEEecCCcccCCCCcc--cceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeE
Q psy12425 368 VNKGGVKSTKAELIIMTAPKFNVPPRFR--DTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI 445 (591)
Q Consensus 368 ~n~~g~~~~~~~l~v~~~p~~~~~~~~~--~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 445 (591)
.|..|.......|.|..+|.+..++... ....+..|+.+.|.|.+.|.|.+.+.|++++..+....++.+........
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (305)
T ss_dssp EETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEE
T ss_pred EcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceE
Confidence 9999988888999998877765443221 34556889999999999999999999999999988777888877778899
Q ss_pred EEEec-cCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCC
Q psy12425 446 LTIRD-ASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP 524 (591)
Q Consensus 446 l~i~~-~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~ 524 (591)
|.|.+ +...|.|.|+|.|.|..|.....+.+.+..+|.+|..+.+......++.|+|.+|..+++..+..|.+++++..
T Consensus 162 l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~ 241 (305)
T 2nzi_A 162 LVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATT 241 (305)
T ss_dssp EEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETT
T ss_pred EEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCC
Confidence 99999 99999999999999999999999999999999999999988889999999999988788889999999999998
Q ss_pred CCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEEeccccccCCC
Q psy12425 525 MSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTYGELLSGME 583 (591)
Q Consensus 525 ~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~~~~p~~~~ 583 (591)
...|..........+.|.+|.+++.|.|+|+|.|.+|.|.+|..+..++++++.|..+.
T Consensus 242 ~~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t~~~~p~~~~ 300 (305)
T 2nzi_A 242 AERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKTRAMN 300 (305)
T ss_dssp SCCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEECCC-------
T ss_pred CCccEECccccCceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEcCCccccccc
Confidence 89999887666789999999999999999999999999999999888888877776554
No 9
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=2.6e-41 Score=333.74 Aligned_cols=442 Identities=12% Similarity=0.062 Sum_probs=281.4
Q ss_pred ceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEE
Q psy12425 3 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 82 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~ 82 (591)
..+.+.+|++++|.|.+.+ .+.|+|++..+. ..+...+|.|.+++.+|+|.|+|.+.| |. +..+.
T Consensus 44 ~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~--------~~~~~~~L~I~~~~~~D~G~Y~C~a~n--g~-~~~~~ 108 (524)
T 2ec8_A 44 SDLIVRVGDEIRLLCTDPG----FVKWTFEILDET--------NENKQNEWITEKAEATNTGKYTCTNKH--GL-SNSIY 108 (524)
T ss_dssp SEEECCTTSCEEEEEECTT----EEEEEEESSSCC--------EEECSSEEEESSCCSTTCEEEEEEETT--SC-EEEEE
T ss_pred ceEEEeCCCeEEEEEeCCc----eEEEcCCCcccc--------ccCccceEEEcccchhhCEEEEEeecC--Cc-ceEEE
Confidence 4678999999999999986 899999998661 122345899999999999999999999 43 66788
Q ss_pred EEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEE-EE
Q psy12425 83 INITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEY-LF 161 (591)
Q Consensus 83 l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y-~~ 161 (591)
|.|..+|.....+.......+..+.|.|...... ...+.||.............. ......+.|..+...+.+ .|
T Consensus 109 l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~~v~W~~~~g~~l~~~~~~~---~~~~~~L~i~~~~~~d~G~~Y 184 (524)
T 2ec8_A 109 VFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPE-VTNYSLKGCQGKPLPKDLRFI---PDPKAGIMIKSVKRAYHRLCL 184 (524)
T ss_dssp EECCCSSCSBCCCCCCCEETTSCEEECCCBSCCC-CSCEEEECSSSCCCCSSCEEE---EETTTEEEEESCCGGGTTCEE
T ss_pred EEECCCCcccccccceEEEcCCeEEEECcCCCCc-cceEEEEccCCcCcCCCCcee---ECCCccEEEeccchhhCCceE
Confidence 8888665544434445556788999999864311 122333221111111111111 123557899999999999 99
Q ss_pred EEEEEccCCCCCCCCccCcccccCCCCCCCCCC-CCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCC---ccE
Q psy12425 162 HVMAVNENGMGPPLEGINPIKAKSPYDKPSPPG-IPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD---AWQ 237 (591)
Q Consensus 162 ~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~---~~~ 237 (591)
+|.|.|..|....... ..........+|.... ........|..++|.|.....+....+.+|. .+.. ...
T Consensus 185 ~C~a~n~~~~~~s~~~-~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~-----~~~~~~~~~~ 258 (524)
T 2ec8_A 185 HCSVDQEGKSVLSEKF-ILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKR-----ENSQTKLQEK 258 (524)
T ss_dssp EEEEC----CCCCCCE-ECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEE-----TTCSCCCCEE
T ss_pred EEEEEECCceEEEEEE-EEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEe-----CCCCCccccc
Confidence 9999987654332111 1111101111222111 1234567788999999875322211133221 1111 111
Q ss_pred EEEe-----eecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeecc---ccceecccc
Q psy12425 238 RVNV-----AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLR---NANAIQNHN 309 (591)
Q Consensus 238 ~~~~-----~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~g~~ 309 (591)
.... .......|.|.++...|.|.|+|.|.|..|... ....+.+. .+|.+...+. ...+.+|+.
T Consensus 259 ~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~---~~~~l~V~-----~~p~~~~~~~~~~~~~v~~G~~ 330 (524)
T 2ec8_A 259 YNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSAN---VTTTLEVV-----DKGFINIFPMINTTVFVNDGEN 330 (524)
T ss_dssp EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEE---EEEEEEEE-----SSCEEEEEESSCSEEEECTTCC
T ss_pred cccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceE---EEEEEEEe-----ccCceEeecCCCceEEEcCCCc
Confidence 1110 112346899999999999999999999887543 24455554 4566655433 567889999
Q ss_pred EEEEEEEcCCCCCe-eEEecCCccCCCCC-ceEEEEeC----CeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEe
Q psy12425 310 AQFQCTITGCPKPT-ISWLKGSREITPSA-RHHIFAEG----DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 383 (591)
Q Consensus 310 ~~l~c~~~~~p~~~-v~W~~~~~~~~~~~-~~~~~~~~----~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 383 (591)
+.|.|.+.|.|.+. +.|++++..+.... ++....++ ...+|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 331 v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 410 (524)
T 2ec8_A 331 VDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVN 410 (524)
T ss_dssp EEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEe
Confidence 99999999999999 99999998887655 33332222 24589999999999999999999999999999999999
Q ss_pred cCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeee--------ccceEEEecCCeeEEE----Eecc
Q psy12425 384 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIES--------GGHFHVETSERHAILT----IRDA 451 (591)
Q Consensus 384 ~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~--------~~~~~~~~~~~~~~l~----i~~~ 451 (591)
.+|.+...+. ...| .|.|.+.|.|.|.+.|++++..+.. +.............+. +...
T Consensus 411 ~~P~i~~~~~------~~~g---~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~ 481 (524)
T 2ec8_A 411 TKPEILTYDR------LVNG---MLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSS 481 (524)
T ss_dssp EEEEEEEEEC------CSSS---CEEEEEEEESCCEEECCCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCC
T ss_pred cCCeEeeccc------CcCc---EEEEEEEeecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEE
Confidence 8888765432 2345 9999999999999999999766521 1111111111122222 4444
Q ss_pred CCCcceeEEEEEEcCCCccceEEEEEecCCCCCCC
Q psy12425 452 SNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 486 (591)
Q Consensus 452 ~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~ 486 (591)
..+|.|.|+|.|.|..|..+..+.|.|...|....
T Consensus 482 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~~~~ 516 (524)
T 2ec8_A 482 AFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKEQI 516 (524)
T ss_dssp SCCC-----CEEECSSCEEECCCCCCC--------
T ss_pred EccCCEEEEEEEEcCCCceEEEEEEEEecCCHHHc
Confidence 46999999999999999999999999987765433
No 10
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=2e-39 Score=306.15 Aligned_cols=361 Identities=19% Similarity=0.283 Sum_probs=246.3
Q ss_pred Cceeee---ecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEccc-CCCCceEEEEEEEcCCeee
Q psy12425 2 PNALYI---PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI-RKEDAGDYTVNLSNSSGSV 77 (591)
Q Consensus 2 p~~~~v---~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~Y~c~~~n~~g~~ 77 (591)
|..+.+ .+|+.+.|.|.+.|.|.|.|+|+|||..+......++...++ .|.|.++ +.+|+|.|+|.|.|..|..
T Consensus 12 P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g--~l~i~~~~~~~D~G~Y~C~A~N~~G~~ 89 (384)
T 3kld_A 12 PSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDG--SLLINNPNKTQDAGTYQCIATNSFGTI 89 (384)
T ss_dssp CCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETT--EEEEESCCHHHHCEEEEEEEEETTEEE
T ss_pred CcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECC--EEEEcCCCCcccCEEEEEEEEcCcccE
Confidence 445555 589999999999999999999999999997665555555444 4666665 7899999999999999875
Q ss_pred E-EEEEEEEecCCCCCCCC-cceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcC
Q psy12425 78 S-GTFTINITGLPGPPIGP-LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTE 155 (591)
Q Consensus 78 ~-~~~~l~v~~~p~~p~~~-~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 155 (591)
. ....+.+...+.....+ ..+....+..+.|.|.++.
T Consensus 90 ~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~----------------------------------------- 128 (384)
T 3kld_A 90 VSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPP----------------------------------------- 128 (384)
T ss_dssp ECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCS-----------------------------------------
T ss_pred EecceEEEEecccccccCCCCceeEEcCCCeEEecCCCC-----------------------------------------
Confidence 3 33555554433222111 0111122223333332111
Q ss_pred CcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCc
Q psy12425 156 GQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 235 (591)
Q Consensus 156 ~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~ 235 (591)
....+.+.|.... .++. ...
T Consensus 129 ----------------------------------------------~~~~~~~~W~~~~----~~~~---------~~~- 148 (384)
T 3kld_A 129 ----------------------------------------------HSGELSYAWIFNE----YPSY---------QDN- 148 (384)
T ss_dssp ----------------------------------------------EESCEEEEEEETT----EECC---------CSS-
T ss_pred ----------------------------------------------CCCCeEEEEEECC----CCCE---------eec-
Confidence 0011445665421 0000 000
Q ss_pred cEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcC--CCccCCCeEE-eeccccceeccccEEE
Q psy12425 236 WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKD--PMAAKAPEII-VPLRNANAIQNHNAQF 312 (591)
Q Consensus 236 ~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~--~~~~~~p~~~-~~~~~~~~~~g~~~~l 312 (591)
... .......|.|.++...|.|.|+|.|.|..|..........+.+.. .....+|.+. ..+....+.+|+.+.|
T Consensus 149 -~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l 225 (384)
T 3kld_A 149 -RRF--VSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKL 225 (384)
T ss_dssp -SEE--ECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEE
T ss_pred -cEE--EEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEE
Confidence 000 112345789999999999999999999876432211112222110 0011233333 2344566789999999
Q ss_pred EEEEcCCCCCeeEEecC-CccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCC
Q psy12425 313 QCTITGCPKPTISWLKG-SREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVP 391 (591)
Q Consensus 313 ~c~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~ 391 (591)
.|.+.|.|.|.+.|+++ +..+.... .. ......|.|.++..+|+|.|+|.|.|..|.......|.|..+|.+...
T Consensus 226 ~C~~~g~P~p~i~W~k~~~~~~~~~~--~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~ 301 (384)
T 3kld_A 226 ECFALGNPVPTILWRRADGKPIARKA--RR--HKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQI 301 (384)
T ss_dssp EEEEEEESCCEEEEEETTCCCCCTTC--EE--CTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEC
T ss_pred EEEEeecCCCcEEEEeCCCccccccc--ee--cCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccC
Confidence 99999999999999985 44443321 11 122337999999999999999999999999988899999988876544
Q ss_pred CCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccc
Q psy12425 392 PRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDS 471 (591)
Q Consensus 392 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~ 471 (591)
+ ....+..|+.+.|.|.+.|.|.|.+.|+++|..+....++.+. ...|.|.++..+|+|.|+|.|.|..|...
T Consensus 302 ~---~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~ 374 (384)
T 3kld_A 302 I---NDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE----QGTLNITIVNLSDAGMYQCVAENKHGVIF 374 (384)
T ss_dssp C---CCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEE----TTEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred C---CceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEe----CCEEEEeecChhhCEEEEEEEEeCCceEE
Confidence 3 3456788999999999999999999999999998776666553 34899999999999999999999999999
Q ss_pred eEEEEEec
Q psy12425 472 AIVKIQIS 479 (591)
Q Consensus 472 ~~~~~~v~ 479 (591)
.++.|.|.
T Consensus 375 ~~a~L~V~ 382 (384)
T 3kld_A 375 SSAELSVI 382 (384)
T ss_dssp EEEEEEEC
T ss_pred eceEEEEe
Confidence 88888875
No 11
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=3.1e-38 Score=299.95 Aligned_cols=359 Identities=17% Similarity=0.184 Sum_probs=261.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEEC--CEEeec-----CCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCC
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKN--GRVVQS-----DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSS 74 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~ 74 (591)
|.+..+.+|+++.|.|.+.|.|.+.|.|+|+ |..+.. ..++.+........|.|.+++.+|+|.|+|.|.|..
T Consensus 7 ~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 86 (389)
T 2jll_A 7 LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRI 86 (389)
T ss_dssp CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSS
T ss_pred cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCC
Confidence 5677899999999999999999999999999 888865 356666655667899999999999999999999988
Q ss_pred eeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCc
Q psy12425 75 GSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLT 154 (591)
Q Consensus 75 g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 154 (591)
|..+..+.|.|..+|.
T Consensus 87 g~~~~~~~l~V~~~P~---------------------------------------------------------------- 102 (389)
T 2jll_A 87 GGHQKSMYLDIEYAPK---------------------------------------------------------------- 102 (389)
T ss_dssp CEEEEEEEEEEEEEEE----------------------------------------------------------------
T ss_pred CCcceEEEEEEEeCCE----------------------------------------------------------------
Confidence 8765555554431000
Q ss_pred CCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCC
Q psy12425 155 EGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD 234 (591)
Q Consensus 155 ~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~ 234 (591)
+ ..
T Consensus 103 -----------------------------------------------------~--~~---------------------- 105 (389)
T 2jll_A 103 -----------------------------------------------------F--IS---------------------- 105 (389)
T ss_dssp -----------------------------------------------------E--CC----------------------
T ss_pred -----------------------------------------------------E--ec----------------------
Confidence 0 00
Q ss_pred ccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEE
Q psy12425 235 AWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQC 314 (591)
Q Consensus 235 ~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c 314 (591)
++ ....+.+|+.+.|.|
T Consensus 106 ---------------------------------------------------------~~------~~~~~~~g~~~~l~C 122 (389)
T 2jll_A 106 ---------------------------------------------------------NQ------TIYYSWEGNPINISC 122 (389)
T ss_dssp ---------------------------------------------------------SC------CEEEECTTCCEEEEE
T ss_pred ---------------------------------------------------------Cc------ceEEeccCCEEEEEE
Confidence 00 001134566788999
Q ss_pred EEcCCCCCeeEEecCCccCCCCC--ceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCC
Q psy12425 315 TITGCPKPTISWLKGSREITPSA--RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 392 (591)
Q Consensus 315 ~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~ 392 (591)
.+.|.|.+.+.|++++..+.... ++.+...+...+|.|.++...|.|.|+|.|.|..|.......+.+...|..+.
T Consensus 123 ~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~-- 200 (389)
T 2jll_A 123 DVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPY-- 200 (389)
T ss_dssp CEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCE--
T ss_pred EEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCc--
Confidence 99999999999999998887654 56666677778999999999999999999999999988888888766554221
Q ss_pred CcccceeecCCCeEEEEEeee----ccCCC--eEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcC
Q psy12425 393 RFRDTAYFDKGENVVVKIPFT----GYPKP--KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEND 466 (591)
Q Consensus 393 ~~~~~~~~~~g~~~~l~c~~~----~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~ 466 (591)
. .......+..+.|.|... +.|.. .+.|.+++.. ....+........+.|.++.+.+.|.|+|.|.|.
T Consensus 201 -~-~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~----~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~ 274 (389)
T 2jll_A 201 -G-VKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASE----IWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNG 274 (389)
T ss_dssp -E-EEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCS----CCEEEECSTTCSEEEECSCCTTCEEEEEEEEEES
T ss_pred -c-eEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCc----ccEEeeccCCcceEEECCccCCCEEEEEEEEEcC
Confidence 1 111223456788888642 22322 5778776542 1222333445688999999999999999999999
Q ss_pred CCccceEEEEEecC----CCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEe--ceeeeeEEE
Q psy12425 467 LGMDSAIVKIQISD----RPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV--GNTRFTTMA 540 (591)
Q Consensus 467 ~g~~~~~~~~~v~~----~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~ 540 (591)
.|.+..+..+.+.. +|.+|. +.+...+.+++.|+|.+|. ++++++.+|.|+|+......|... .......+.
T Consensus 275 ~G~~~~s~~~~~~t~~~~~p~~p~-~~~~~~~~~~v~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 352 (389)
T 2jll_A 275 KGQGDYSKIEIFQTLPVREPSPPS-IHGQPSSGKSFKLSITKQD-DGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHII 352 (389)
T ss_dssp SCBCCCCCCEEEECCCCCCCCCCC-EEEEEETTTEEEEEECCCC-CCSSCCCEEEEEEEC-----CCBCCEECTTCCEEE
T ss_pred CccCCCCcceEEEecCCCCCCCCc-cccccCcCCEEEEEEECCC-CCCCcccEEEEEEEeCCCCcceeEeeccCCcceEE
Confidence 99875444343333 566664 5555678999999999765 566789999999998766667532 234456899
Q ss_pred EcCcccCceEEEEEEEEcCCcCCCCCCCcceEEecc
Q psy12425 541 ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTYG 576 (591)
Q Consensus 541 i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~~ 576 (591)
|.+|.+++.|.|+|+|.|..|.|++|.. .++|.+
T Consensus 353 i~~L~~~t~Y~~~V~A~n~~G~s~~s~~--~~~T~~ 386 (389)
T 2jll_A 353 LEHLQWTMGYEVQITAANRLGYSEPTVY--EFSMPP 386 (389)
T ss_dssp ECSCCTTCEEEEEEEEEC-CCBCCCEEE--EEECCC
T ss_pred eCCcCCCCEEEEEEEEEcCCcCCCceee--EecCCC
Confidence 9999999999999999999999999865 344543
No 12
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=314.87 Aligned_cols=437 Identities=11% Similarity=0.066 Sum_probs=259.7
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.+++|.+|++++|.|.+.+.|..++.|++++..+.....+... .....+|.|.+++++|+|.|+|.|.|..|.....+
T Consensus 55 ~~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~-~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~ 133 (527)
T 3qs9_E 55 AAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATNYTILF 133 (527)
T ss_dssp -CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEE
T ss_pred eeeEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCC-cceEEEEEECcCChhhCeeEEEEEEeccccEEEEE
Confidence 34789999999999999998888999999999987655444321 12335799999999999999999999988877777
Q ss_pred EEEEecCCC-CCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEE
Q psy12425 82 TINITGLPG-PPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 160 (591)
Q Consensus 82 ~l~v~~~p~-~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 160 (591)
.|.|...+. .+..|. ....+..+.|.|... |.+...+.+.+.......... ............+.+.+.+.
T Consensus 134 ~v~v~~~~~~~~~~p~--~~~~~~~~~L~C~a~----G~P~P~i~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~G~ 205 (527)
T 3qs9_E 134 TVSIRNTLLYTLRRPY--FRKMENQDALVCISE----SVPEPIVEWVLCDSQGESCKE--ESPAVVKKEEKVLHELFGTD 205 (527)
T ss_dssp EEEEC-----CEEEEE--EEECSSSSCEEEEEE----ESSCCEEEEEEC---------------CEEECCSEECCCCSSC
T ss_pred EEEECCceeeccCCCc--EEecCCceEEEEEEc----eecCCeEEEEECCCCCccccc--cCCcEEEEeeeeccccCCEE
Confidence 777652111 111111 112234445556421 111112222211111000000 00011111122344677889
Q ss_pred EEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEE
Q psy12425 161 FHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN 240 (591)
Q Consensus 161 ~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 240 (591)
|+|.|.|..|....... .+.... .+..+| .......|..+.|.|..........+.+| ...............
T Consensus 206 Y~C~A~N~~G~~~~~~~--~l~V~~--~p~~~p--~~~~v~~G~~v~L~C~~~~g~p~p~i~W~-k~g~~l~~~~~~~~~ 278 (527)
T 3qs9_E 206 IRCCARNELGRECTRLF--TIDLNQ--TPQTTL--PQLFLKVGEPLWIRCKAVHVNHGFGLTWE-LENKALEEGNYFEMS 278 (527)
T ss_dssp EEEEEECSSCEEEEECE--EEESSS--CCCCSC--CEEEECTTSCEEEEEEEEESSSCCCEEEE-CSSSCCCGGGEEEEE
T ss_pred EEEEEEeCCCcccceEE--EEEEec--cCccCC--CceEEeCCCeEEEEEEEccCCCCeEEEEE-ECCEECCCCceeeee
Confidence 99999999886543211 111111 111122 24556678899999987411111223322 111111111111111
Q ss_pred ee-----ecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeec--cccceeccccEEEE
Q psy12425 241 VA-----ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL--RNANAIQNHNAQFQ 313 (591)
Q Consensus 241 ~~-----~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~ 313 (591)
.. ......|.|.++...|.|.|+|.|.|. ......+.+. .+|.+...+ ....+.+|+.+.|.
T Consensus 279 ~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~------~~~~~~L~V~-----~~p~i~~~~~~~~~~v~~G~~v~L~ 347 (527)
T 3qs9_E 279 TYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH------PSQSALVTIV-----EKGFINATNSSEDYEIDQYEEFCFS 347 (527)
T ss_dssp EEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE------EEEEEEEEEC-------CEEECCCSCCEECCCTTCCCCEE
T ss_pred eeccCcceeeEEEEEEccCCcccCeEEEEEEEeC------CCceEEEEEE-----ccCccccccCcccEEEcCCCeEEEE
Confidence 11 112346999999999999999999887 1234555554 344444332 24567889999999
Q ss_pred EEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCC
Q psy12425 314 CTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 393 (591)
Q Consensus 314 c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~ 393 (591)
|.+.|.|.|.+.|++++..+....++.. ...+|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...+.
T Consensus 348 C~~~g~P~p~i~W~k~g~~l~~~~~~~~----~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~~ 423 (527)
T 3qs9_E 348 VRFKAYPQIRCTWTFSRKSFPCEQKGLD----NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEAS 423 (527)
T ss_dssp EEEEEESCCEEEEEETTEEEECBCCBCS----SSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECCC
T ss_pred EEEEecCCCEEEEEECCEECcCCccccc----CCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeCC
Confidence 9999999999999999988765444221 234799999999999999999999999998899999998887754431
Q ss_pred cccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccc------e-----EEEecCCeeEEEEeccCCCcceeEEEE
Q psy12425 394 FRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGH------F-----HVETSERHAILTIRDASNVDTAPYRVV 462 (591)
Q Consensus 394 ~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~------~-----~~~~~~~~~~l~i~~~~~~~~g~y~c~ 462 (591)
+ ..|.|.+.|.|.|.+.|++++........ . ..........++|.-....|.|.|+|.
T Consensus 424 ---------~--~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~ 492 (527)
T 3qs9_E 424 ---------A--SQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCC 492 (527)
T ss_dssp ---------C--E---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEE
T ss_pred ---------C--CEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEE
Confidence 2 35799999999999999987654321110 0 011111223334444445699999999
Q ss_pred EEcCCCccceEEEEEecC
Q psy12425 463 AENDLGMDSAIVKIQISD 480 (591)
Q Consensus 463 a~n~~g~~~~~~~~~v~~ 480 (591)
|.|..|..+..+.|.+..
T Consensus 493 A~N~~G~~~~~~~L~V~~ 510 (527)
T 3qs9_E 493 AYNSLGTSCETILLNSPG 510 (527)
T ss_dssp EECSSCEEEEEEEC----
T ss_pred EEeCCCCceeEEEEecCC
Confidence 999999999998887654
No 13
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=9.7e-38 Score=298.21 Aligned_cols=367 Identities=21% Similarity=0.336 Sum_probs=259.6
Q ss_pred CceeeeecCCeEEEEEEecc-CCCceEEEEECCEEeecCCceeEEEeCCeEEEEEccc-----CCCCceEEEEEEEcCCe
Q psy12425 2 PNALYIPEGDNTKVKIFYAG-DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI-----RKEDAGDYTVNLSNSSG 75 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-----~~~d~g~Y~c~~~n~~g 75 (591)
|.++.+.+|++++|.|.+.+ .|.+.+.|+|+|..+......+.....+. .|.|.++ +.+|+|.|+|.+.|..+
T Consensus 28 P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~-~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~ 106 (403)
T 3laf_A 28 PSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNG-SLLIQNILHSRHHKPDEGLYQCEASLGDS 106 (403)
T ss_dssp CCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTS-CEEECSCCCBTTBCSSCEEEEEEEECGGG
T ss_pred CCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCC-cEEEeeeeccCCCCCcceEEEEEEEeCCC
Confidence 78899999999999999987 68889999999999876533333333332 5777777 77899999999996543
Q ss_pred ee--EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCC
Q psy12425 76 SV--SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGL 153 (591)
Q Consensus 76 ~~--~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 153 (591)
.. +..+.+.|..+|.....+.......+..+.|
T Consensus 107 ~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l--------------------------------------------- 141 (403)
T 3laf_A 107 GSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLL--------------------------------------------- 141 (403)
T ss_dssp CEEECCCEEEEECCCCEECSCCCCEEEETTSCEEE---------------------------------------------
T ss_pred ccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEE---------------------------------------------
Confidence 33 3346666655432222222222223333333
Q ss_pred cCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCC
Q psy12425 154 TEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGS 233 (591)
Q Consensus 154 ~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~ 233 (591)
.|.+.. .....+.|...... +. ....
T Consensus 142 --------~C~~~~-----------------------------------~p~~~v~W~~~~~~----~~-------~~~~ 167 (403)
T 3laf_A 142 --------KCEVIG-----------------------------------DPMPTIHWQKNQQD----LN-------PIPG 167 (403)
T ss_dssp --------CCCEEC-----------------------------------SSCCEEEEEESSSB----CC-------CCTT
T ss_pred --------EEEEcc-----------------------------------cCCCeEEEEECCEe----cc-------ccCC
Confidence 333320 00013455442110 00 0000
Q ss_pred CccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCC-ccCCCeEEeeccccceeccccEEE
Q psy12425 234 DAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM-AAKAPEIIVPLRNANAIQNHNAQF 312 (591)
Q Consensus 234 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~g~~~~l 312 (591)
.. . ........|.|.++...|.|.|+|.|.|..|.... ....+.+.... ...++.+...+....+.+|+.+.|
T Consensus 168 ~~--~--~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~--~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l 241 (403)
T 3laf_A 168 DS--R--VVVLPSGALQISRLQPGDSGVYRCSARNPASTRTG--NEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVL 241 (403)
T ss_dssp CC--S--EEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBC--CCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEE
T ss_pred ce--E--EEEcCCceEEEcccccccCEEEEEEEEcCCCceec--cceeEEEecCCCcccCceEecCCCceEecCCCcEEE
Confidence 00 0 01123457999999999999999999998765332 23444443221 112234455566677889999999
Q ss_pred EEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCC
Q psy12425 313 QCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPP 392 (591)
Q Consensus 313 ~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~ 392 (591)
.|.+.+.|.+.+.|++++..+...........+. +|.|.++..+|+|.|+|.|.|..|.......|.|..+|.+...+
T Consensus 242 ~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~ 319 (403)
T 3laf_A 242 ECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGS--NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHP 319 (403)
T ss_dssp CCEEEEESCCEEEEEETTEECCCSSSSEEEETTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECC
T ss_pred EEEcCCCCCCeEEEEECCeeccCCCceEEECCcc--EEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecC
Confidence 9999999999999999998876544333333332 79999999999999999999999999999999999988876554
Q ss_pred CcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccce
Q psy12425 393 RFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSA 472 (591)
Q Consensus 393 ~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~ 472 (591)
....+..|+.+.|.|.+.|.|.+.+.|+++|..+.....+.+. ....|.|.++..+|.|.|+|.|.|..|....
T Consensus 320 ---~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 393 (403)
T 3laf_A 320 ---SNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIV---GGSNLRILGVVKSDEGFYQCVAENEAGNAQS 393 (403)
T ss_dssp ---CCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEE---TTTEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred ---cceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEe---cCccEEEeccccccCEEEEEEEEcCCceEEE
Confidence 3355788999999999999999999999999988776666554 3467999999999999999999999999999
Q ss_pred EEEEEecCCC
Q psy12425 473 IVKIQISDRP 482 (591)
Q Consensus 473 ~~~~~v~~~p 482 (591)
.+.|.|..||
T Consensus 394 ~~~l~V~~P~ 403 (403)
T 3laf_A 394 SAQLIVPKPA 403 (403)
T ss_dssp EEEEECCCC-
T ss_pred EEEEEEeCCC
Confidence 9999998765
No 14
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=3.9e-38 Score=301.20 Aligned_cols=367 Identities=20% Similarity=0.284 Sum_probs=259.3
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEc----ccCCCCceEEEEEEEcCCeee
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIK----EIRKEDAGDYTVNLSNSSGSV 77 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~----~~~~~d~g~Y~c~~~n~~g~~ 77 (591)
+.++.+.+|+++.|.|.+.|.|.+.+.|+|+|..+......++.......+|.|. +++.+|+|.|+|.|.|..|..
T Consensus 24 ~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~ 103 (404)
T 3p3y_A 24 AKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA 103 (404)
T ss_dssp CTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEE
T ss_pred CccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEEEEEcCCCeE
Confidence 4567899999999999999999999999999998865533333333333455554 888999999999999998887
Q ss_pred E-EEEEEEEecCCCCCCCCcc-eEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcC
Q psy12425 78 S-GTFTINITGLPGPPIGPLD-VSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTE 155 (591)
Q Consensus 78 ~-~~~~l~v~~~p~~p~~~~~-~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 155 (591)
. ..+.|.|...|..+..... .....+..+.|.|..+. +.+
T Consensus 104 ~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~---~~p----------------------------------- 145 (404)
T 3p3y_A 104 LSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPP---GLP----------------------------------- 145 (404)
T ss_dssp EEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCC---CSS-----------------------------------
T ss_pred eeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCC---CCC-----------------------------------
Confidence 4 6688888877655443211 22233444444443211 000
Q ss_pred CcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCc
Q psy12425 156 GQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 235 (591)
Q Consensus 156 ~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~ 235 (591)
...+.|.... ...+ ....
T Consensus 146 -------------------------------------------------~~~v~W~~~~---~~~~----------~~~~ 163 (404)
T 3p3y_A 146 -------------------------------------------------SPVIFWMSSS---MEPI----------TQDK 163 (404)
T ss_dssp -------------------------------------------------CCEEEEECTT---SCBC----------CCCS
T ss_pred -------------------------------------------------CCeEEEeCCC---cccc----------CCCC
Confidence 0234555421 0000 0000
Q ss_pred cEEEEeeecCCceeeecCcccCC-cEEEEEEEEcCCCCCCCCCCcceEEEcC--CCccCCCeEEeec---cccceecccc
Q psy12425 236 WQRVNVAICAPSQINIPNLIEGR-QYEFRVYAQNEAGLSLPSSASNSVQIKD--PMAAKAPEIIVPL---RNANAIQNHN 309 (591)
Q Consensus 236 ~~~~~~~~~~~~~~~i~~l~~~~-~~~y~c~a~n~~g~~~~s~~~~~~~~~~--~~~~~~p~~~~~~---~~~~~~~g~~ 309 (591)
.. .......|.|.++...| .|.|+|.|.|..|..........+.+.. .....+|.+.... ....+.+|+.
T Consensus 164 ~~----~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~ 239 (404)
T 3p3y_A 164 RV----SQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD 239 (404)
T ss_dssp SE----EECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSC
T ss_pred cE----EEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCC
Confidence 00 11234568899999999 5999999999877543333334444432 1122334443322 2355789999
Q ss_pred EEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCccc
Q psy12425 310 AQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFN 389 (591)
Q Consensus 310 ~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~ 389 (591)
+.|.|.+.+.|.+.+.|++++..+..... .... ...+|.|.++..+|+|.|+|.|.|..|.......|.|..+|.+.
T Consensus 240 v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 316 (404)
T 3p3y_A 240 LLLECIASGVPTPDIAWYKKGGDLPSDKA-KFEN--FNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWL 316 (404)
T ss_dssp EEEECCBCCSSCCEEEEEETTBCCCTTTE-EEEG--GGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEECCCCCCcEEEEECCEECCCCcc-cccc--cCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeee
Confidence 99999999999999999999988865543 2221 12379999999999999999999999999889999999988776
Q ss_pred CCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccc-eEEEecCCeeEEEEeccCCCcceeEEEEEEcCCC
Q psy12425 390 VPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGH-FHVETSERHAILTIRDASNVDTAPYRVVAENDLG 468 (591)
Q Consensus 390 ~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g 468 (591)
..+ ....+..|+.+.|.|.+.|.|.|.+.|+++|..+..... ..... ....|.|.++..+|+|.|+|.|.|..|
T Consensus 317 ~~~---~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~N~~G 391 (404)
T 3p3y_A 317 DEP---KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREV--AGDTIIFRDTQISSRAVYQCNTSNEHG 391 (404)
T ss_dssp ECC---CCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEE--ETTEEEESSCCSSCCCEEEEEEEETTE
T ss_pred ccC---CcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEe--cCCEEEEeecCHHHCEEEEEEEEeCCC
Confidence 554 335678899999999999999999999999998865431 11111 235899999999999999999999999
Q ss_pred ccceEEEEEecC
Q psy12425 469 MDSAIVKIQISD 480 (591)
Q Consensus 469 ~~~~~~~~~v~~ 480 (591)
.....+.|.|.+
T Consensus 392 ~~~~~~~l~V~d 403 (404)
T 3p3y_A 392 YLLANAFVSVLD 403 (404)
T ss_dssp EEEEEEEEEEC-
T ss_pred cEEEEEEEEEEe
Confidence 999988888754
No 15
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=6.6e-37 Score=290.86 Aligned_cols=286 Identities=25% Similarity=0.366 Sum_probs=242.4
Q ss_pred CeEEeeccccceeccccEEEEEEEcCCCCCeeEEecC--CccCCC-----CCceEEEEeCCeEEEEEcceecccceEEEE
Q psy12425 293 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKG--SREITP-----SARHHIFAEGDTYTLIINSVYGVDADEYVC 365 (591)
Q Consensus 293 p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~--~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c 365 (591)
|.+.. +.+..+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.. ..++.+.......+|.|.++..+|+|.|+|
T Consensus 2 P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (389)
T 2jll_A 2 PHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDC 80 (389)
T ss_dssp CEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEE
T ss_pred CeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEE
Confidence 55555 4566788899999999999999999999998 776654 356666666667799999999999999999
Q ss_pred EEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeecc--ceEEEecCCe
Q psy12425 366 RAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGG--HFHVETSERH 443 (591)
Q Consensus 366 ~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~ 443 (591)
.|.|..|..+..+.|.|..+|.+..++ ....+..|+.+.|.|.+.|.|.+.+.|++++..+.... ++.+...+..
T Consensus 81 ~a~n~~g~~~~~~~l~V~~~P~~~~~~---~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 157 (389)
T 2jll_A 81 EAASRIGGHQKSMYLDIEYAPKFISNQ---TIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRK 157 (389)
T ss_dssp EEECSSCEEEEEEEEEEEEEEEECCSC---CEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSC
T ss_pred EEEeCCCCcceEEEEEEEeCCEEecCc---ceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCE
Confidence 999999999999999999998876544 23456889999999999999999999999999887554 5666666678
Q ss_pred eEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeC
Q psy12425 444 AILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREH 523 (591)
Q Consensus 444 ~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~ 523 (591)
..|.|.++...|.|.|+|.|.|..|.....+.+.+..+|.+|..+.+...+..++.|+|.+|..+++.++..|.++|+..
T Consensus 158 ~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~ 237 (389)
T 2jll_A 158 MILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEV 237 (389)
T ss_dssp EEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEET
T ss_pred EEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEEC
Confidence 89999999999999999999999999988899999999999988888888899999999988777888999999999998
Q ss_pred CCCceEEec-eeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEEeccccccCCC
Q psy12425 524 PMSSWIRVG-NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTYGELLSGME 583 (591)
Q Consensus 524 ~~~~~~~~~-~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~~~~p~~~~ 583 (591)
+...|.... ......+.|.+|.+++.|.|+|+|.|..|.|.+|....+ ++.+..|+.+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~-~t~~~~~p~~p 297 (389)
T 2jll_A 238 ASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIF-QTLPVREPSPP 297 (389)
T ss_dssp TCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEE-ECCCCCCCCCC
T ss_pred CCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEE-EecCCCCCCCC
Confidence 888887653 334578999999999999999999999999999987554 44443344433
No 16
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=326.89 Aligned_cols=547 Identities=14% Similarity=0.089 Sum_probs=351.3
Q ss_pred CCceeeeecCCeEEEEEEec-------cCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcC
Q psy12425 1 MPNALYIPEGDNTKVKIFYA-------GDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 73 (591)
Q Consensus 1 ~p~~~~v~~G~~~~l~C~~~-------~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~ 73 (591)
+|.+.+|.+|++++|.|.+. +.+.+.|.|++||+.+..+. +++ ..+....|+|.++...|++ |.|.+...
T Consensus 9 ~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~~-~~~-~~~~~~~l~i~~~~~~~~~-y~C~~~~~ 85 (589)
T 3l5h_A 9 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQ-YTI-INRTASSVTFTDIASLNIQ-LTCNILTF 85 (589)
T ss_dssp SCSCCCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGGG-CBC-CSSSCCBCCCCCCCSSCCC-CCCC-CCT
T ss_pred ecCCCEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChHH-ccc-cCCcEeEEEEecCCCccee-eEEecccC
Confidence 48889999999999999997 56778999999998776552 222 2233568999999998765 77888642
Q ss_pred C--eeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEe-ecCcceEEE
Q psy12425 74 S--GSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST-TCHDTTFIV 150 (591)
Q Consensus 74 ~--g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~-~~~~~~~~i 150 (591)
. +.....+.|.+..+|.+|.+ +.+......+++++|.++... ..+..|.+.+..... .+..+.. ......+.+
T Consensus 86 ~~~~~~~~~~~l~v~~pP~~P~n-l~c~~~~~~~~~~~W~~~~~~--~~~~~y~l~~~~~~~-~~~~c~~~~~~~~~c~~ 161 (589)
T 3l5h_A 86 GQLEQNVYGITIISGLPPEKPKN-LSCIVNEGKKMRCEWDGGRET--HLETNFTLKSEWATH-KFADCKAKRDTPTSCTV 161 (589)
T ss_dssp TCC-CCCCCCCCCC-CCCCCCEE-EEEEEETTSCEEEEEECCSCC--SSCEEEEECCBCSSS-BCCCEECBTTBSSCCBC
T ss_pred CCcccEEEeEEEeccCCCCCCEe-eEEEECCCceEEEEECCCCcC--CcCceEEEEEEEcCC-CcccCCCCCCCcEEEEE
Confidence 2 12234466777778887776 567777778999999987632 356789998765432 2332322 223455666
Q ss_pred c-CCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeE--EeecCCeEEEEEecCCCCCCcceEEEEEE
Q psy12425 151 Q-GLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVV--TQVGGDFVNLSWDKPLDDGGSRIQGYWID 227 (591)
Q Consensus 151 ~-~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~~~v~l~w~~~~~~~~~~~~~y~~~ 227 (591)
. ++.++..|.|+|.|.|..|.+...... ........|.+|..+.+ ......++.|+|.+|...+ ..+..|.++
T Consensus 162 ~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~---~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~-~~~~~Y~v~ 237 (589)
T 3l5h_A 162 DYSTVYFVNIEVWVEAENALGKVTSDHIN---FDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKS-VIILKYNIQ 237 (589)
T ss_dssp CSCCCSSSCEEECEEEEESSCCBCCCCEE---ECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGG-TSCEEEEEE
T ss_pred CCCCchheeEEEEEEEEeCCCCcccccEE---EccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCC-eeeEEEEEE
Confidence 6 788999999999999999986432211 11112236778888877 3456789999999876543 367899999
Q ss_pred eeecCCCccEEEEee--ecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCC--CccCCCeEEeeccccc
Q psy12425 228 KHEVGSDAWQRVNVA--ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP--MAAKAPEIIVPLRNAN 303 (591)
Q Consensus 228 ~~~~~~~~~~~~~~~--~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~--~~~~~p~~~~~~~~~~ 303 (591)
++..+...|...... ......+.+.+|.++..|.|+++|.|..|.+.++..+..+.+... .+..+|..........
T Consensus 238 ~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~~~ 317 (589)
T 3l5h_A 238 YRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSH 317 (589)
T ss_dssp EEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCSCS
T ss_pred ECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeecCc
Confidence 999887788765321 223478899999999999999999999888776544444332221 1123444322211111
Q ss_pred eeccccEEEEEEEcC--CC-----CCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceee
Q psy12425 304 AIQNHNAQFQCTITG--CP-----KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST 376 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~--~p-----~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~ 376 (591)
......+.|.|.... .. .-.|.|...+.... .... ....+.+ +.+...|.+++.|.|..|....
T Consensus 318 ~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~~~-----~~~~--~~~~~~~--l~~~~~Y~~~V~A~n~~G~~~~ 388 (589)
T 3l5h_A 318 TQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ-----NYTV--NATKLTV--NLTNDRYLATLTVRNLVGKSDA 388 (589)
T ss_dssp STTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSCCC-----BCCC--SSSCCEE--CCCSSCCCEEEEEEBTTBCCCC
T ss_pred CCCcceEEEEEeeCCchhccCceeeEEEEEecCCCCce-----eecc--CCceEEE--EeCCCCEEEEEEEEeCCccCCC
Confidence 234467788776411 11 11344533322111 0101 1112333 5678889999999999998755
Q ss_pred eeEEEEecCCcc-cCCCCcccceeecCCCeEEEEEeeeccC--CCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCC
Q psy12425 377 KAELIIMTAPKF-NVPPRFRDTAYFDKGENVVVKIPFTGYP--KPKITWYRDNEVIESGGHFHVETSERHAILTIRDASN 453 (591)
Q Consensus 377 ~~~l~v~~~p~~-~~~~~~~~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 453 (591)
+. +.+...+.. ..++. .......+..+.|.+.....+ .-.|.|...+...................+.+.+|.+
T Consensus 389 s~-~~~~~~~~~~~~p~~--~l~~~~~~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p 465 (589)
T 3l5h_A 389 AV-LTIPACDFQATHPVM--DLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAE 465 (589)
T ss_dssp CC-CCCCCTTCCCCSCCC--SCEEEECSSSEEEECCCCSSCCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSCCCS
T ss_pred eE-EEeecccccCCCCcc--eEEEEECCCeEEEEEECCCCCccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhcccc
Confidence 42 122111111 11111 111122356677776553221 2246665543221100111111223455677799999
Q ss_pred CcceeEEEEEEcCCCccceEE-EE-EecCCCCCCCCCeeeeecCCeeEEEeecc-ccCCCcceeeEEEEeeeCCCCceEE
Q psy12425 454 VDTAPYRVVAENDLGMDSAIV-KI-QISDRPDPPQFPTVEDIGHDSLALVWRAP-IWDGGSNITNYIVEKREHPMSSWIR 530 (591)
Q Consensus 454 ~~~g~y~c~a~n~~g~~~~~~-~~-~v~~~p~~p~~~~~~~~~~~~v~l~W~~p-~~~~~~~~~~y~v~~~~~~~~~~~~ 530 (591)
...|.|++.|.|..|.+.... .+ +....|.+|..+.+...+.+++.|+|.+| ..++++.+.+|.|+|+...+..|..
T Consensus 466 ~t~Y~~~V~A~~~~g~g~~~~~~~~t~~~~P~~pp~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~~~ 545 (589)
T 3l5h_A 466 SKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAV 545 (589)
T ss_dssp SSEEEEEECBEETTEECCCEEEEEESSCCCCSSCCCCCEECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCSSCCCCCE
T ss_pred CcEEEEEEEEEeCCcccCCEEEEEEeccCCCCCCCeEEEeecccceEEEEecCCCHHHcCccceeEEEEEEeCCCCeEEE
Confidence 999999999999988775432 22 22245666667888888999999999974 3344568999999999877766655
Q ss_pred eceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcce
Q psy12425 531 VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDL 571 (591)
Q Consensus 531 ~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~ 571 (591)
..+...+.++|.+|.|++.|.|+|+|.|.+| |..|....+
T Consensus 546 ~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-~~~S~~~~~ 585 (589)
T 3l5h_A 546 NVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTF 585 (589)
T ss_dssp EECTTCCBCCBCSCCSSCCEECCEEEEETTE-EEECCCCEE
T ss_pred EeCCcccEEEecCCCCCCEEEEEEEEEeCCC-CCCCCCeEE
Confidence 5566778999999999999999999999999 888876554
No 17
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=7.7e-38 Score=298.04 Aligned_cols=369 Identities=17% Similarity=0.256 Sum_probs=253.6
Q ss_pred CceeeeecCCeEEEEEEecc-CCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeE-E
Q psy12425 2 PNALYIPEGDNTKVKIFYAG-DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS-G 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~-~ 79 (591)
|.++.+.+|+++.|.|.+.+ .|.+.+.|+|+|..+....+ ++.......+|.|.+++.+|+|.|+|.|.|..|... .
T Consensus 13 p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~ 91 (395)
T 1bih_A 13 PAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEH-NAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSR 91 (395)
T ss_dssp CSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTT-TEEECTTSCCEEESSCCGGGCEEEEEEEEETTEEEECC
T ss_pred CCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccc-eEEEecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeE
Confidence 67889999999999999998 89999999999998877653 233333445899999999999999999999988764 3
Q ss_pred EEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEE
Q psy12425 80 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEY 159 (591)
Q Consensus 80 ~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 159 (591)
.+.|.|...+.++..+.......+..+.|.|..+. +.+.
T Consensus 92 ~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~---~~p~-------------------------------------- 130 (395)
T 1bih_A 92 VISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPN---AYPK-------------------------------------- 130 (395)
T ss_dssp CEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCE---EESC--------------------------------------
T ss_pred EEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCC---CCCC--------------------------------------
Confidence 35555544333222221222223444555554211 0000
Q ss_pred EEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEE
Q psy12425 160 LFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRV 239 (591)
Q Consensus 160 ~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 239 (591)
..+.|....... .+.. .........
T Consensus 131 ----------------------------------------------~~v~W~~~~~~~-~~~~------~~~~~~~~~-- 155 (395)
T 1bih_A 131 ----------------------------------------------PLITWKKRLSGA-DPNA------DVTDFDRRI-- 155 (395)
T ss_dssp ----------------------------------------------CEEEEEEEETTS-CGGG------CCCCCCTTE--
T ss_pred ----------------------------------------------CeEEEEecCCCc-Cccc------ccccccccE--
Confidence 123343311000 0000 000000000
Q ss_pred EeeecCCceeeecCcccCCcE---EEEEEEEcCCCCCCCCCCcceEEEcCC-----CccCCCeEEeeccccceeccccEE
Q psy12425 240 NVAICAPSQINIPNLIEGRQY---EFRVYAQNEAGLSLPSSASNSVQIKDP-----MAAKAPEIIVPLRNANAIQNHNAQ 311 (591)
Q Consensus 240 ~~~~~~~~~~~i~~l~~~~~~---~y~c~a~n~~g~~~~s~~~~~~~~~~~-----~~~~~p~~~~~~~~~~~~~g~~~~ 311 (591)
.......|.|.++...|.| .|+|.|.|..|..........+..... ....+|.+ .+....+.+|+.+.
T Consensus 156 --~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~ 231 (395)
T 1bih_A 156 --TAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTM 231 (395)
T ss_dssp --EECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEE
T ss_pred --EEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEE
Confidence 0113346888899999999 999999998876432111111111100 00113333 24566788999999
Q ss_pred EEEEEcCCCCCeeEEecCCccCCCCCceEEEE--eCCeEEEEEcceecccceEEEEEEEeCCcceee-eeEEEEecCCcc
Q psy12425 312 FQCTITGCPKPTISWLKGSREITPSARHHIFA--EGDTYTLIINSVYGVDADEYVCRAVNKGGVKST-KAELIIMTAPKF 388 (591)
Q Consensus 312 l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~-~~~l~v~~~p~~ 388 (591)
|.|.+.|.|.+.+.|++++..+.......+.. ......|.|.++..+|+|.|+|.|.|..|.... .+.|.|..+|.+
T Consensus 232 l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~ 311 (395)
T 1bih_A 232 IYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKY 311 (395)
T ss_dssp EEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEE
T ss_pred EEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCcc
Confidence 99999999999999999998876554333321 222337999999999999999999999998755 889999999887
Q ss_pred cCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCC
Q psy12425 389 NVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLG 468 (591)
Q Consensus 389 ~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g 468 (591)
...+. ....+..|+.+.|.|.+.|.|.|.+.|+++|..+..+ ++.+. + ..|.|.++...|+|.|+|.|.|..|
T Consensus 312 ~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~--~--~~L~i~~~~~~d~G~Y~C~a~N~~G 384 (395)
T 1bih_A 312 EQKPE--KVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVT--D--SGLVIKGVKNGDKGYYGCRATNEHG 384 (395)
T ss_dssp EECCC--SEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEEE--T--TEEEESSCCSTTCEEEEEEEEETTE
T ss_pred ccCCC--cceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEEE--C--CEEEEeeCCcccCEEEEEEEEccCC
Confidence 76553 2356789999999999999999999999999988654 44433 2 3899999999999999999999999
Q ss_pred ccceEEEEEe
Q psy12425 469 MDSAIVKIQI 478 (591)
Q Consensus 469 ~~~~~~~~~v 478 (591)
.....+.|.|
T Consensus 385 ~~~~~~~l~V 394 (395)
T 1bih_A 385 DKYFETLVQV 394 (395)
T ss_dssp EEEEEEEEEE
T ss_pred CceEEEEEEE
Confidence 9988888876
No 18
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1.8e-37 Score=293.79 Aligned_cols=361 Identities=19% Similarity=0.238 Sum_probs=255.8
Q ss_pred Cceeee---ecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCC-CCceEEEEEEEcCCeee
Q psy12425 2 PNALYI---PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRK-EDAGDYTVNLSNSSGSV 77 (591)
Q Consensus 2 p~~~~v---~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~Y~c~~~n~~g~~ 77 (591)
|.+..+ .+|+++.|.|.+.|.|.+.+.|+|+|..+......++...+. .|.|.++.. +|+|.|+|.|.|..|..
T Consensus 11 p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~--~L~i~~~~~~~D~G~Y~C~a~n~~g~~ 88 (382)
T 1cs6_A 11 PAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAG--DLVISNPVKAKDAGSYQCVATNARGTV 88 (382)
T ss_dssp CCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETT--EEEEESCCHHHHCEEEEEEEEETTEEE
T ss_pred CCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCC--eEEEecccccccCEEEEEEEEcCCcEE
Confidence 555555 799999999999999999999999999987664444444443 799999997 99999999999998876
Q ss_pred EE-EEEEEEecCCCCCCC-CcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcC
Q psy12425 78 SG-TFTINITGLPGPPIG-PLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTE 155 (591)
Q Consensus 78 ~~-~~~l~v~~~p~~p~~-~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 155 (591)
.. .+.|.|...|..+.. +.......+..+.|.|..+. +.+
T Consensus 89 ~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~---~~p----------------------------------- 130 (382)
T 1cs6_A 89 VSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPP---HYP----------------------------------- 130 (382)
T ss_dssp ECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCS---EES-----------------------------------
T ss_pred EecceEEEeeccccccccCCCceEEecCCcEEEEeCCCC---CCC-----------------------------------
Confidence 33 466666654443322 11223334445555554211 000
Q ss_pred CcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCc
Q psy12425 156 GQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 235 (591)
Q Consensus 156 ~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~ 235 (591)
...+.|........ + .....
T Consensus 131 -------------------------------------------------~~~i~W~~~~~~~~--~---------~~~~~ 150 (382)
T 1cs6_A 131 -------------------------------------------------ALSYRWLLNEFPNF--I---------PADGR 150 (382)
T ss_dssp -------------------------------------------------CCEEEEEESSTTCB--C---------CCCSS
T ss_pred -------------------------------------------------CcEEEEEECCCccc--c---------ccCce
Confidence 02234443211000 0 00000
Q ss_pred cEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCC--CCcceEEEcCC-CccCCCeEEe-eccccceeccccEE
Q psy12425 236 WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS--SASNSVQIKDP-MAAKAPEIIV-PLRNANAIQNHNAQ 311 (591)
Q Consensus 236 ~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s--~~~~~~~~~~~-~~~~~p~~~~-~~~~~~~~~g~~~~ 311 (591)
.. .......|.|.++...|.|.|+|.+.|..|..... .....+.+... ....+|.+.. .+....+.+|+.+.
T Consensus 151 --~~--~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~ 226 (382)
T 1cs6_A 151 --RF--VSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVT 226 (382)
T ss_dssp --EE--ECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEE
T ss_pred --EE--EecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEE
Confidence 00 01123578999999999999999999877532211 11223332211 1122455543 34566788999999
Q ss_pred EEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCC
Q psy12425 312 FQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVP 391 (591)
Q Consensus 312 l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~ 391 (591)
|.|.+.+.|.+.+.|++++..+.... ......|.|.++..+|+|.|+|.|.|..|.......|.|..+|.+...
T Consensus 227 l~C~~~g~p~~~i~W~~~~~~~~~~~------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~ 300 (382)
T 1cs6_A 227 LECFAFGNPVPQIKWRKLDGSQTSKW------LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDV 300 (382)
T ss_dssp EECEEEEESCCEEEEEECCSCCSCCC------SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEC
T ss_pred EEEEEccCCCCEEEEEECCcccccEE------ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccC
Confidence 99999999999999999877654311 112337999999999999999999999999888899999988887654
Q ss_pred CCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccc
Q psy12425 392 PRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDS 471 (591)
Q Consensus 392 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~ 471 (591)
+ ....+..|+.+.|.|.+.|.|.|.+.|+++|..+....++.+. ...|.|.++..+|+|.|+|.|.|..|...
T Consensus 301 ~---~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 373 (382)
T 1cs6_A 301 I---TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVS----GGELRFSKLVLEDSGMYQCVAENKHGTVY 373 (382)
T ss_dssp C---CCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEE----TTEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred C---CccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEE----CCEEEECcCCcccCEEEEEEEEeCCCeEE
Confidence 4 2356788999999999999999999999999998876666553 34899999999999999999999999999
Q ss_pred eEEEEEec
Q psy12425 472 AIVKIQIS 479 (591)
Q Consensus 472 ~~~~~~v~ 479 (591)
..+.|.|.
T Consensus 374 ~~~~l~V~ 381 (382)
T 1cs6_A 374 ASAELTVQ 381 (382)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 88888875
No 19
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=294.62 Aligned_cols=361 Identities=12% Similarity=0.129 Sum_probs=228.6
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.+++|.+|+++.|.|.+.|.|.+.|.|++++..+........ ......+|.|.+++++|+|.|+|.|.|..|.....+
T Consensus 55 ~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~ 133 (423)
T 3qs7_E 55 AAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILF 133 (423)
T ss_dssp -CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEE
T ss_pred cccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceecc-ccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEE
Confidence 4478999999999999999999999999999988765332211 111234799999999999999999999999888888
Q ss_pred EEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEE
Q psy12425 82 TINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 161 (591)
Q Consensus 82 ~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~ 161 (591)
.|.|...|... ... +. + + . .+..-.+
T Consensus 134 ~l~V~~~p~~~-----~~~-------------------p~--~-~-----------------------~----~~~~~~L 159 (423)
T 3qs7_E 134 TVSIRNTLLYT-----LRR-------------------PY--F-R-----------------------K----MENQDAL 159 (423)
T ss_dssp EEEEC-----C-----EEE-------------------EE--E-E-----------------------E----CSSSSCE
T ss_pred EEEEecCcccc-----ccC-------------------Cc--E-e-----------------------c----cCCceEE
Confidence 88887432110 000 00 0 0 0 0111134
Q ss_pred EEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEe
Q psy12425 162 HVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV 241 (591)
Q Consensus 162 ~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 241 (591)
.|.|.. .....++|..... ....+... .. ...
T Consensus 160 ~C~a~G-----------------------------------~P~P~i~W~k~~~----~~~~~~~~----~~---~~~-- 191 (423)
T 3qs7_E 160 VCISES-----------------------------------VPEPIVEWVLCDS----QGESCKEE----SP---AVV-- 191 (423)
T ss_dssp EEEEEE-----------------------------------SSCCEEEEEEC------------------------CE--
T ss_pred EEEEee-----------------------------------ecCCeEEEEECCC----CCcccccc----cc---ccc--
Confidence 565531 1113477876311 11100000 00 000
Q ss_pred eecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcC-CC
Q psy12425 242 AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITG-CP 320 (591)
Q Consensus 242 ~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~p 320 (591)
..... -+...|.|.|+|.|.|..|.... ....+.+.. +|.+ .+.+..+.+|+.+.|.|.+.| .|
T Consensus 192 -~~~~~-----~l~~~d~G~Y~C~A~N~~G~~~~--~~~~l~V~~-----~p~~--~~~~~~v~~G~~v~L~C~~~g~~p 256 (423)
T 3qs7_E 192 -KKEEK-----VLHELFGTDIRCCARNELGRECT--RLFTIDLNQ-----TPQT--TLPQLFLKVGEPLWIRCKAVHVNH 256 (423)
T ss_dssp -EECCS-----EECCCCSSCEEEEEECSSCEEEE--ECEEEESSS-----CCCS--STTEEEEETTSCEEEEEEEEESSS
T ss_pred -cccce-----EEecccCeEEEEEEEcCCCCcce--eeEEEEEec-----CCcc--CCCceEEeCCCeEEEEEEEEcCCC
Confidence 00011 11567899999999999886432 223444432 2222 223566889999999999998 67
Q ss_pred CCeeEEecCCccCCCCCceEEE-EeC-----CeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCc
Q psy12425 321 KPTISWLKGSREITPSARHHIF-AEG-----DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRF 394 (591)
Q Consensus 321 ~~~v~W~~~~~~~~~~~~~~~~-~~~-----~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~ 394 (591)
.+.+.|++++..+.....+... ..+ ...+|.|.++..+|+|.|+|.|.|. ....+.|.|..+|.+...+..
T Consensus 257 ~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~ 333 (423)
T 3qs7_E 257 GFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSS 333 (423)
T ss_dssp CCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---
T ss_pred CcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCC
Confidence 7999999999877554322111 111 1237999999999999999999997 677788999988877654432
Q ss_pred ccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEE
Q psy12425 395 RDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIV 474 (591)
Q Consensus 395 ~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~ 474 (591)
....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....... .....+.+.....+|+|.|+|.|.|..|..+.++
T Consensus 334 -~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~ 408 (423)
T 3qs7_E 334 -EDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMF 408 (423)
T ss_dssp -CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEE
T ss_pred -ccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccc----cCCcEEEEEecccccCEEEEEEEEcCCceEEEEE
Confidence 24567889999999999999999999999999886542100 0111222345667899999999999999999999
Q ss_pred EEEecCCCCCCCCC
Q psy12425 475 KIQISDRPDPPQFP 488 (591)
Q Consensus 475 ~~~v~~~p~~p~~~ 488 (591)
.|.+.++|.+|...
T Consensus 409 ~L~v~~~p~~~~~~ 422 (423)
T 3qs7_E 409 TLNIRSGTKHHHHH 422 (423)
T ss_dssp EEC-----------
T ss_pred EEEEecCCcccccC
Confidence 99999999888753
No 20
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=1.4e-36 Score=288.53 Aligned_cols=359 Identities=18% Similarity=0.258 Sum_probs=250.6
Q ss_pred ceeeeecCCeEEEEEEeccCCCceEEEEE-CCEEeecCCceeEEEeCCeEEEEEcccCCCC------ceEEEEEEEcCCe
Q psy12425 3 NALYIPEGDNTKVKIFYAGDQPMEVSLTK-NGRVVQSDDRFKFTVLDDYIIIFIKEIRKED------AGDYTVNLSNSSG 75 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d------~g~Y~c~~~n~~g 75 (591)
..+.+.+|+.+.|.|.+.|.|.+.|+|+| ||..+....+.+....+ .+|.|.+++.+| +|.|+|.|.|..|
T Consensus 12 ~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~--~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g 89 (388)
T 2v5m_A 12 NRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSD--GKLVFPPFRAEDYRQEVHAQVYACLARNQFG 89 (388)
T ss_dssp SEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECST--TEEEECCCCGGGCCHHHHEEEEEEEEEETTE
T ss_pred ceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCC--ceEEecccChhhccccccCceEEEEEEccCC
Confidence 35778999999999999999999999999 88888765444433333 379999999997 9999999999998
Q ss_pred ee-EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCc
Q psy12425 76 SV-SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLT 154 (591)
Q Consensus 76 ~~-~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 154 (591)
.. +..+.|.+...|.....+.......+..+.|.|........
T Consensus 90 ~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~------------------------------------ 133 (388)
T 2v5m_A 90 SIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVAD------------------------------------ 133 (388)
T ss_dssp EEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTT------------------------------------
T ss_pred eEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCC------------------------------------
Confidence 75 45577777766654443333344455556666653221100
Q ss_pred CCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCC
Q psy12425 155 EGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD 234 (591)
Q Consensus 155 ~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~ 234 (591)
....+.|.... ..+.. .......
T Consensus 134 -------------------------------------------------~~~~v~W~~~~----~~~~~----~~~~~~~ 156 (388)
T 2v5m_A 134 -------------------------------------------------FVEVVSWHTDE----EENYF----PGAEYDG 156 (388)
T ss_dssp -------------------------------------------------TEEEEEEEETT----CCEEC----SSSCBTT
T ss_pred -------------------------------------------------CcceEEEEeCC----Ccccc----cccCCCC
Confidence 01234444311 00000 0000000
Q ss_pred ccEEEEeeecCCceeeecCcccCCc-EEEEEEEEcCCCCCC-CCCCcceEEEcCCCccCCCeEEe-eccccceeccccEE
Q psy12425 235 AWQRVNVAICAPSQINIPNLIEGRQ-YEFRVYAQNEAGLSL-PSSASNSVQIKDPMAAKAPEIIV-PLRNANAIQNHNAQ 311 (591)
Q Consensus 235 ~~~~~~~~~~~~~~~~i~~l~~~~~-~~y~c~a~n~~g~~~-~s~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~ 311 (591)
. . .......|.|.++...|. |.|+|.|.|..+... .+.....+.+..+....+|.+.. ......+.+|+.+.
T Consensus 157 ~-~----~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~ 231 (388)
T 2v5m_A 157 K-Y----LVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTIS 231 (388)
T ss_dssp T-E----EECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEE
T ss_pred c-E----EEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEE
Confidence 0 0 011345789999999999 999999999754322 22222344444322111222111 11234578899999
Q ss_pred EEEEEcCCCCCeeEEecCCccCC------CCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecC
Q psy12425 312 FQCTITGCPKPTISWLKGSREIT------PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTA 385 (591)
Q Consensus 312 l~c~~~~~p~~~v~W~~~~~~~~------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~ 385 (591)
|.|.+.|.|.+.+.|++++..+. ...++.. ..+ +|.|.++..+|+|.|+|.|.|..|.......|.|..+
T Consensus 232 l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~-~~~---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 307 (388)
T 2v5m_A 232 LLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ-VSG---TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP 307 (388)
T ss_dssp ECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEE-ETT---EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEecCCCCcccccccccCceec-ccC---EEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCC
Confidence 99999999999999999754432 1222221 222 7999999999999999999999999888899999988
Q ss_pred CcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEc
Q psy12425 386 PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAEN 465 (591)
Q Consensus 386 p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n 465 (591)
|.+...+ ....+..|+.+.|.|.+.|.|.|.+.|+++|..+.. ....|.|.++..+|.|.|+|.|.|
T Consensus 308 p~~~~~~---~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~----------~~~~L~i~~v~~~d~G~Y~C~a~N 374 (388)
T 2v5m_A 308 LSAKIDP---PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH----------SESVLRIESVKKEDKGMYQCFVRN 374 (388)
T ss_dssp EEEEEES---SEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSC----------CSSEEEESSCCGGGCEEEEEEEEC
T ss_pred CccccCC---CcEEecCCCCEEEEEEeccccCCeEEEEECCEECcc----------CCCEEEEecCChhhCEEEEEEEEc
Confidence 8765444 245678999999999999999999999999987743 346899999999999999999999
Q ss_pred CCCccceEEEEEe
Q psy12425 466 DLGMDSAIVKIQI 478 (591)
Q Consensus 466 ~~g~~~~~~~~~v 478 (591)
..|....++.|.|
T Consensus 375 ~~G~~~~~~~l~V 387 (388)
T 2v5m_A 375 DRESAEASAELKL 387 (388)
T ss_dssp SSCEEEEEEEEEE
T ss_pred CCCcEEEEEEEEe
Confidence 9999988888876
No 21
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=8e-40 Score=339.90 Aligned_cols=460 Identities=16% Similarity=0.185 Sum_probs=65.0
Q ss_pred eeeeecCCeEEEEEEecc--CCCceEEEEECCEEeecCCceeEE--------EeCCeEEEEEcccCCCCceEEEEEEEcC
Q psy12425 4 ALYIPEGDNTKVKIFYAG--DQPMEVSLTKNGRVVQSDDRFKFT--------VLDDYIIIFIKEIRKEDAGDYTVNLSNS 73 (591)
Q Consensus 4 ~~~v~~G~~~~l~C~~~~--~p~~~v~W~~~~~~~~~~~~~~~~--------~~~~~~~l~i~~~~~~d~g~Y~c~~~n~ 73 (591)
.+.+.+|+++.|.|.+.+ .+.+.+.|++++..+......... .......|.|.+++.+|+|.|+|.+.|.
T Consensus 233 ~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 312 (772)
T 3v2a_R 233 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 312 (772)
T ss_dssp CEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECS
T ss_pred ceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcC
Confidence 478999999999999987 556789999999876554322111 1123468999999999999999999999
Q ss_pred CeeeEEEEEEEEecCCCCCCCC---cceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEE
Q psy12425 74 SGSVSGTFTINITGLPGPPIGP---LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIV 150 (591)
Q Consensus 74 ~g~~~~~~~l~v~~~p~~p~~~---~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i 150 (591)
.|..+..+.|.|...|.....+ .......+..+.|.|...... ...+.+|. ....... . ........+.|
T Consensus 313 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p-~~~v~W~~-~g~~l~~----~-~~~~~~~~L~i 385 (772)
T 3v2a_R 313 LMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYP-PPEIKWYK-NGIPLES----N-HTIKAGHVLTI 385 (772)
T ss_dssp SCEEEEEEEEEEECCCC---------------------------------------------------------------
T ss_pred CcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeC-CCeEEEEE-CCEeCCC----C-ceEccceeEEE
Confidence 9988888999999877543321 123344567788888643211 11222221 0000000 0 00113467888
Q ss_pred cCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCC-CCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEe-
Q psy12425 151 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP-PGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDK- 228 (591)
Q Consensus 151 ~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~- 228 (591)
..+...+.+.|+|.|.|..|....+........ .+...... ...+......+..++|.|.....+....+.+|+-..
T Consensus 386 ~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~-~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~ 464 (772)
T 3v2a_R 386 MEVSERDTGNYTVILTNPISKEKQSHVVSLVVY-VPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEE 464 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCChhcCceEEEEEEECCcCeEEEEEEEEEEe-cCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCc
Confidence 999999999999999998876543322221111 11111000 000111244577788888864322211133332100
Q ss_pred -------------eecCCCccEEE-------------------EeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCC
Q psy12425 229 -------------HEVGSDAWQRV-------------------NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 276 (591)
Q Consensus 229 -------------~~~~~~~~~~~-------------------~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s 276 (591)
.......|... .........|.|.++ .|.|.|+|.|.|..|...
T Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~-- 540 (772)
T 3v2a_R 465 ECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGE-- 540 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccc--
Confidence 00000011100 000011245666665 688999999999988653
Q ss_pred CCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEE---------------
Q psy12425 277 SASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI--------------- 341 (591)
Q Consensus 277 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~--------------- 341 (591)
....+.+. .+|.+...+. ..+.+|+.+.|.|.+.+.|.+.+.|++++..+........
T Consensus 541 -~~~~l~V~-----~~p~i~~~p~-~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (772)
T 3v2a_R 541 -RVISFHVT-----RGPEITLQPD-MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLN 613 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -eeEEEEEE-----CCceeeccCC-cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeecc
Confidence 23344443 2455544433 3477899999999999999999999998766543221111
Q ss_pred -----EEeCCeEEEEEcceecccceEEEEEEEeCCccee--eeeEEEE--ecCCcccCCCCcccceeecCCCeEEEEEee
Q psy12425 342 -----FAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS--TKAELII--MTAPKFNVPPRFRDTAYFDKGENVVVKIPF 412 (591)
Q Consensus 342 -----~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~--~~~~l~v--~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~ 412 (591)
...+...+|.|.++..+|+|.|+|.|.|..|... ....+.| ..+|.+...+ ....+..|+.+.|.|.+
T Consensus 614 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~---~~~~v~~g~~~~l~C~~ 690 (772)
T 3v2a_R 614 ATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNL---ENQTTSIGESIEVSCTA 690 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCC---CceEEeCCCCEEEEEEe
Confidence 1111234699999999999999999999665442 2334444 5667665443 23557889999999999
Q ss_pred eccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCC
Q psy12425 413 TGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQF 487 (591)
Q Consensus 413 ~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~ 487 (591)
.|.|.|.+.|+++|..+....++.+. .....|.|.++..+|+|.|+|.|.|..|..+.++.|.|.++|+....
T Consensus 691 ~g~P~p~v~W~k~g~~l~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~~~ 763 (772)
T 3v2a_R 691 SGNPPPQIMWFKDNETLVEDSGIVLK--DGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTNL 763 (772)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred CccCCCeEEEEECCeECcCCCCeEEc--CCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCcccc
Confidence 99999999999999988766554433 34678999999999999999999999999999999999998876543
No 22
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=296.94 Aligned_cols=452 Identities=12% Similarity=0.119 Sum_probs=265.6
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECC--EEee------------cCCceeEEEeCCeEEEEEcccCCCCceEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG--RVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 67 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~--~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 67 (591)
|..+.+.+|+++.|.|.+.+.|.+.+.|+|++ ..+. ...|+.....+...+|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (523)
T 2rcj_C 7 PPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYY 86 (523)
T ss_pred CCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEE
Confidence 77899999999999999999999999999974 2111 124555444455679999999999999999
Q ss_pred EEEEcCCeee---EEEEEEEEecCCC-CCC---CCcceEEecCceEEEEecCCCCCCC-cceeeEEEEEEecCCCceEE-
Q psy12425 68 VNLSNSSGSV---SGTFTINITGLPG-PPI---GPLDVSEITKHTCTLHWNPPKYDGG-LKVTHYVVERRDISMPHWIC- 138 (591)
Q Consensus 68 c~~~n~~g~~---~~~~~l~v~~~p~-~p~---~~~~~~~~~~~~~~l~w~~p~~~~~-~~~~~y~~~~~~~~~~~~~~- 138 (591)
|.|.|..|.. ...+.|.|...+. +|. .+.......+..+.|.|........ ..+.||.- ...........
T Consensus 87 C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~ 165 (523)
T 2rcj_C 87 CASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKAD-GSPVKAGVETTK 165 (523)
T ss_pred EEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecC-CCCCCCceEecc
Confidence 9999987642 3446777754322 221 2222233456688999975431111 12332220 00010000000
Q ss_pred EEeec-----CcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCC-CCCCeEEeecCCeEEEEEec
Q psy12425 139 ISTTC-----HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSP-PGIPVVTQVGGDFVNLSWDK 212 (591)
Q Consensus 139 ~~~~~-----~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~v~l~w~~ 212 (591)
..... ....+.|..+...+.+.|+|.|.|..|......... ........|.. +..+......|..++|.|..
T Consensus 166 ~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~--~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~ 243 (523)
T 2rcj_C 166 PSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT--ECSASTKGPSVFPLAPSSKSTSGGTAALGCLV 243 (523)
T ss_pred ccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeee--ecCCCCcCCEEEecCCCcccccCCceEEEEEE
Confidence 00000 113588899999999999999999877533221100 00000011100 01111223567889999987
Q ss_pred CCCCCCc-ceEEEEEEeeecCCCccEEEEee---ecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCC
Q psy12425 213 PLDDGGS-RIQGYWIDKHEVGSDAWQRVNVA---ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPM 288 (591)
Q Consensus 213 ~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~ 288 (591)
....... .+.+| ................. ......|.|.++...| |.|+|.|.|..|... ....+.+.
T Consensus 244 ~g~~P~p~~v~W~-k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~---~~~~l~v~--- 315 (523)
T 2rcj_C 244 KDYFPQPVTVSWN-SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK---VDKRVEPL--- 315 (523)
T ss_pred eceeCCCeEEEEe-cCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcc---eEEecCCC---
Confidence 4321111 12222 11111000000001000 0012478999999999 999999999988642 22222222
Q ss_pred ccCCCeE-Eeeccccc-eeccccEEEEEEEcCCCC----CeeEEecCCccCCCCCceEEE-EeCCe----EEEEEcceec
Q psy12425 289 AAKAPEI-IVPLRNAN-AIQNHNAQFQCTITGCPK----PTISWLKGSREITPSARHHIF-AEGDT----YTLIINSVYG 357 (591)
Q Consensus 289 ~~~~p~~-~~~~~~~~-~~~g~~~~l~c~~~~~p~----~~v~W~~~~~~~~~~~~~~~~-~~~~~----~~l~i~~~~~ 357 (591)
..|.+ ...+.... +.+|+.+.|.|.+.|.|+ +.|.|++++..+......... ..++. ..|.|.++..
T Consensus 316 --~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~ 393 (523)
T 2rcj_C 316 --SLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNW 393 (523)
T ss_pred --cCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHh
Confidence 22443 33333333 788999999999998653 599999999887655432211 11221 2588999999
Q ss_pred ccceEEEEEEEeCCcceeeeeEEE----EecCCcccCCCCcccceeecCCCeEEEEEeeeccCCC--eEEEeeCCeEeee
Q psy12425 358 VDADEYVCRAVNKGGVKSTKAELI----IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP--KITWYRDNEVIES 431 (591)
Q Consensus 358 ~d~g~y~c~a~n~~g~~~~~~~l~----v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~--~v~W~~~~~~~~~ 431 (591)
+|.|.|+|.|.|..+.......+. +..+|.+...+.. ...+. +..+.|.|.+.|.|++ .+.|+++|..+..
T Consensus 394 ~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~--~~~~~-~~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~ 470 (523)
T 2rcj_C 394 LDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPS--REEMT-KNQVSLTCLVKGFYPSDIAVEWESNGQPENN 470 (523)
T ss_pred cCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCEEEEeCCC--hHHcc-CCceEEEEEEEeeECCCCEEEEEECCEECCC
Confidence 999999999999877765554554 3445554432211 11223 4449999999998766 9999999998864
Q ss_pred ccceEEEecCC-----eeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 432 GGHFHVETSER-----HAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 432 ~~~~~~~~~~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
..........+ ...|.+......|.|.|+|.|.|....
T Consensus 471 ~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l~ 513 (523)
T 2rcj_C 471 YKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 513 (523)
T ss_pred eeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCcC
Confidence 33222221211 233455555557799999999998543
No 23
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=6.1e-37 Score=296.69 Aligned_cols=424 Identities=12% Similarity=0.080 Sum_probs=265.7
Q ss_pred CceeeeecCCeEEEEEEeccCCCceE-----EEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCee
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEV-----SLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS 76 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v-----~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~ 76 (591)
|..+.|.+|++++|.|.+.| |.+.+ .|+|++..+... ....|.|.+++. |+| |+|.|.+..+.
T Consensus 6 P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~---------~~~~l~i~~v~~-d~g-Y~C~a~~~~~~ 73 (450)
T 1z7z_I 6 PSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGN---------NRKVYELSNVQE-DSQ-PMCYSNCPDGQ 73 (450)
T ss_dssp SSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTT---------TEEEEEEEEECS-CBC-CEEEEEETTEE
T ss_pred CCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecCC---------CceEEEEEeccc-CCe-eEEEEeCCCCc
Confidence 78899999999999999998 88888 999987755322 223889999988 999 99999887777
Q ss_pred eEEEEEEEEecCCCCCC-CCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEe--ecCcceEEEcCC
Q psy12425 77 VSGTFTINITGLPGPPI-GPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST--TCHDTTFIVQGL 153 (591)
Q Consensus 77 ~~~~~~l~v~~~p~~p~-~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~--~~~~~~~~i~~l 153 (591)
.+..+.|.|...|.... .+.......+..+.|.|.... ..+...+.+.|...+. ....... ......+.|..+
T Consensus 74 ~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g---~~~~~~~~v~W~k~g~-~l~~~~~~~~~~~~~L~i~~~ 149 (450)
T 1z7z_I 74 STAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEG---GAPRANLTVVLLRGEK-ELKREPAVGEPAEVTTTVLVR 149 (450)
T ss_dssp EEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEEC---CBCGGGEEEEEEETTE-EEEEEECCTTTEEEEEEEECC
T ss_pred ceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecC---CCCCcCcEEEEeeCCE-EeecccccccccceEEEEEee
Confidence 78888999988765442 222345567889999997543 1111112222222111 0000000 112347899999
Q ss_pred cCCcEEEEEEEEEccCCCCCCCC---ccCcccccCCCCCCCCCCC-CeEEeecCCeEEEEEecCCCCCCcceEEEEEE-e
Q psy12425 154 TEGQEYLFHVMAVNENGMGPPLE---GINPIKAKSPYDKPSPPGI-PVVTQVGGDFVNLSWDKPLDDGGSRIQGYWID-K 228 (591)
Q Consensus 154 ~~~~~y~~~~~a~n~~g~~~~~~---~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~-~ 228 (591)
..++.+.|+|.|.|..|...... ............++.+|.. .......|..++|.|.............+|.. .
T Consensus 150 ~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~ 229 (450)
T 1z7z_I 150 RDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGD 229 (450)
T ss_dssp SSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETT
T ss_pred ccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCC
Confidence 99999999999999877432100 0001110000001111211 01345678899999997543111112222211 1
Q ss_pred eecCCCccEEEEeeecCCceee-ecCcccCCcE--EEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeecccccee
Q psy12425 229 HEVGSDAWQRVNVAICAPSQIN-IPNLIEGRQY--EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI 305 (591)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~-i~~l~~~~~~--~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 305 (591)
..... ..... .....+. ..++...|.| .|+|.|.|..|... ....+.+... .+|.+.. ....+.
T Consensus 230 ~~~~~----~~~~~-~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~---~~~~l~V~~~---~~p~i~~--~~~~v~ 296 (450)
T 1z7z_I 230 QRLNP----TVTYG-NDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQE---TLQTVTIYSF---PAPNVIL--TKPEVS 296 (450)
T ss_dssp EECCC----EEEEE-TTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEE---EEEEEEEECC---CCCEEEE--SCSEEE
T ss_pred EeCCc----eEEec-CCceeEEEEEEeEhhhCCcEEEEEEEccCCccEE---EEEEEEEecC---CCCeEec--CCeeEe
Confidence 11111 11111 1111111 1166889988 99999999877542 2344454421 2355543 345789
Q ss_pred ccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCc-c---eeeeeEEE
Q psy12425 306 QNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG-V---KSTKAELI 381 (591)
Q Consensus 306 ~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g-~---~~~~~~l~ 381 (591)
+|+.+.|.|.+. |.+.+.| +|..+.. .+....|.|.++..+|.|.|+|.|.|..+ . ......|.
T Consensus 297 ~G~~v~l~C~~~--p~p~i~W--~g~~~~~--------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~ 364 (450)
T 1z7z_I 297 EGTEVTVKCEAH--PRAKVTL--NGVPAQP--------LGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELR 364 (450)
T ss_dssp TTCEEEEEEEC----------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECE
T ss_pred CCCcEEEEEecC--CCCEeEE--CCEEcCC--------CCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEE
Confidence 999999999998 8899999 6655521 12233799999999999999999997665 3 34678888
Q ss_pred EecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEE
Q psy12425 382 IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRV 461 (591)
Q Consensus 382 v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c 461 (591)
|..+|.+...+. .....+.+|+.+.|.|.+.|.|.|.+.|+++|..+...+ ..+ .+..+|+|.|+|
T Consensus 365 V~~~P~~~~~~~-p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g----------~~~---~v~~~d~G~Y~C 430 (450)
T 1z7z_I 365 VLYGPRLDERDC-PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIG----------ESV---TVTRDLEGTYLC 430 (450)
T ss_dssp EEEEEECCSTTS-CSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTT----------SCE---ECCGGGCEEEEE
T ss_pred EecCCceeeccC-CCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCC----------CeE---eEehhhCeEEEE
Confidence 988888765432 234567889999999999999999999999987433221 112 578899999999
Q ss_pred EEEcCCCccceEEEEEecC
Q psy12425 462 VAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 462 ~a~n~~g~~~~~~~~~v~~ 480 (591)
.|.|..|..+..+.|.|..
T Consensus 431 ~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 431 RARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEeCCCceeEEEEEEEEc
Confidence 9999999999999998865
No 24
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=9.2e-36 Score=304.84 Aligned_cols=472 Identities=13% Similarity=0.112 Sum_probs=253.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEE-EE--ECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCee-e
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVS-LT--KNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS-V 77 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~-W~--~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~-~ 77 (591)
|.++.+.+|+++.|.|.+.|.|.+.+. |+ +||..+.......+.......+|.|.++.+.|.|.|+|.|.|..|. .
T Consensus 171 ~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~ 250 (731)
T 2v5y_A 171 IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGI 250 (731)
T ss_dssp CCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEE
T ss_pred ccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcc
Confidence 457889999999999999999999988 88 7887765442211111122468999999999999999999999998 5
Q ss_pred EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCc
Q psy12425 78 SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQ 157 (591)
Q Consensus 78 ~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 157 (591)
+..+.|.|..+|.+|..| .+......++.|.|.++..+++.++..|.++++.. ...|..... .....+.+.+|.+++
T Consensus 251 s~~~~l~V~~~P~~~~~p-~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~-~~~~~~~~~-~~~~~~~i~~L~p~t 327 (731)
T 2v5y_A 251 SNYAELVVKEPPVPIAPP-QLASVGATYLWIQLNANSINGDGPIVAREVEYCTA-SGSWNDRQP-VDSTSYKIGHLDPDT 327 (731)
T ss_dssp CCCEEEEEECCCCBSSCC-EEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEES-SSSCEEEEE-CCSSEEEECSCCTTC
T ss_pred eeeEEEEEecCCCCCCCc-ceeccCCceEEEEeCCcccCCCCccEEEEEEEEEC-CCCceEEec-cCcceEEEeCCCCCC
Confidence 667889999999887765 45566788999999988766668899999999875 446765543 456889999999999
Q ss_pred EEEEEEEEE--ccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCC-CcceEEEEEEeeecCCC
Q psy12425 158 EYLFHVMAV--NENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDG-GSRIQGYWIDKHEVGSD 234 (591)
Q Consensus 158 ~y~~~~~a~--n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~-~~~~~~y~~~~~~~~~~ 234 (591)
.|.|+|.|. |..|.+..+...... .....+|.+|..+.+.....+++.|+|.++.... ...+.+|.+.++.....
T Consensus 328 ~Y~~~V~A~~~N~~G~s~~S~~~~~~--t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~ 405 (731)
T 2v5y_A 328 EYEISVLLTRPGEGGTGSPGPALRTR--TKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGG 405 (731)
T ss_dssp EEEEEEEEECSSTTCSCCBCCCEEEE--CCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSS
T ss_pred EEEEEEEEEecCCCccccCCCcEEee--ecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCC
Confidence 999999999 999988876543222 2223345677778888889999999999875322 23567899988876544
Q ss_pred ccEEEE----eeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeecccccee-cccc
Q psy12425 235 AWQRVN----VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI-QNHN 309 (591)
Q Consensus 235 ~~~~~~----~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~g~~ 309 (591)
.+.... ........++|.+|.+++.|.|++.|.|..|.+. + ....+......+..+|.. .+... ....
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S-~~~~~~T~~~~P~~p~~~-----~~~~~~~~~s 478 (731)
T 2v5y_A 406 QEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-S-QELIVQTDEDLPGAVPTE-----SIQGSTFEEK 478 (731)
T ss_dssp SEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-C-CCEEEECCCCCCCCCCTT-----TCEEEEETTE
T ss_pred CCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-C-ceEEEEccCCCCCCCCcc-----eEEeeecCCe
Confidence 332221 1223457899999999999999999999998763 2 222222221111111100 11111 1222
Q ss_pred EEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCccc
Q psy12425 310 AQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFN 389 (591)
Q Consensus 310 ~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~ 389 (591)
+ .+.|......-..-..|.+ ........+ .
T Consensus 479 i------------~l~W~~P~~~~g~i~~Y~V---------~~~~~~~~~---------------~-------------- 508 (731)
T 2v5y_A 479 I------------FLQWREPTQTYGVITLYEI---------TYKAVSSFD---------------P-------------- 508 (731)
T ss_dssp E------------EEECCCCSCCSSCCCEEEE---------EEEEEEECC------------------------------
T ss_pred E------------EEEEcCCCCCCCCccceEE---------EEEECcCCC---------------c--------------
Confidence 3 4566432110000001111 000000000 0
Q ss_pred CCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 390 VPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 390 ~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
.|... .....+........++|.+|.+...|.|++.|.|..|.
T Consensus 509 -------------------------------~~~~~------~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 551 (731)
T 2v5y_A 509 -------------------------------EIDLS------NQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGF 551 (731)
T ss_dssp ---------------------------------CCC------CCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEE
T ss_pred -------------------------------ccccc------CcceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCcc
Confidence 00000 00111222345668899999999999999999999998
Q ss_pred cceEEEEEecCCCCCCCC---Ce--eeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCc----------------e
Q psy12425 470 DSAIVKIQISDRPDPPQF---PT--VEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSS----------------W 528 (591)
Q Consensus 470 ~~~~~~~~v~~~p~~p~~---~~--~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~----------------~ 528 (591)
+..+. +.+...+.+|.. +. ....+.+++.|+|.+|. +++++|.+|.|.++...... |
T Consensus 552 g~~s~-~~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~pp~-~~~g~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (731)
T 2v5y_A 552 GPPAT-NQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAH-SRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHF 629 (731)
T ss_dssp EEEEE-EEEECCCCCCCC--------------------------------------------------------------
T ss_pred CCCcc-cEEEcCCCCCCCCCcccccccccCCceEEEEEeCCC-CCCCceEEEEEEEEecCCCCCccccccccCcccccCH
Confidence 76553 455544444433 22 23457789999999875 55668999999887543211 1
Q ss_pred EEe---------------------------ceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEEe
Q psy12425 529 IRV---------------------------GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 574 (591)
Q Consensus 529 ~~~---------------------------~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t 574 (591)
... ++.....+....|.|++.|.|+|+|.+.+|.+..+..+.+.|.
T Consensus 630 ~~~~~~~~~~y~aa~~~p~~~~~~~~~~vg~~~~~~~~~n~~L~p~~~Y~i~v~A~s~~g~~~~~~~v~~~t~ 702 (731)
T 2v5y_A 630 QNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETKIDCVQVATK 702 (731)
T ss_dssp -------------------------------------------------------------------------
T ss_pred HHHhhcCCcceEEEEcChhhCcccCCEEECCCCeECCEECCCCCCCCceEEEEEEEEecCCCcEeeeEEEecc
Confidence 100 0011123344559999999999999999999988887665444
No 25
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=7.4e-34 Score=257.14 Aligned_cols=272 Identities=22% Similarity=0.425 Sum_probs=230.7
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+.|.|.+.+.|+|+|..+....++++...++...|.|.+++.+|+|.|+|.+.|..|..+..+
T Consensus 12 p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~ 91 (284)
T 2rik_A 12 PVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSA 91 (284)
T ss_dssp CCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEE
Confidence 67889999999999999999999999999999999888888888878888999999999999999999998877655555
Q ss_pred EEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEE
Q psy12425 82 TINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 161 (591)
Q Consensus 82 ~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~ 161 (591)
.|.|..+|..
T Consensus 92 ~l~V~~~p~~---------------------------------------------------------------------- 101 (284)
T 2rik_A 92 QLGVQEPPRF---------------------------------------------------------------------- 101 (284)
T ss_dssp EEEEECCCEE----------------------------------------------------------------------
T ss_pred EEEccCCCcc----------------------------------------------------------------------
Confidence 5444321100
Q ss_pred EEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEe
Q psy12425 162 HVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV 241 (591)
Q Consensus 162 ~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 241 (591)
+ ..
T Consensus 102 ----------------------------------------------~--~~----------------------------- 104 (284)
T 2rik_A 102 ----------------------------------------------I--KK----------------------------- 104 (284)
T ss_dssp ----------------------------------------------E--EC-----------------------------
T ss_pred ----------------------------------------------c--cc-----------------------------
Confidence 0 00
Q ss_pred eecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCC
Q psy12425 242 AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK 321 (591)
Q Consensus 242 ~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~ 321 (591)
.. ....+.+|+.+.|.|.+.+.|.
T Consensus 105 -------------------------------------------------~~-------~~~~v~~g~~~~l~C~~~g~p~ 128 (284)
T 2rik_A 105 -------------------------------------------------LE-------PSRIVKQDEHTRYECKIGGSPE 128 (284)
T ss_dssp -------------------------------------------------CC-------SEEEEETTCCEEEEEEEESSSC
T ss_pred -------------------------------------------------CC-------CceEecCCceEEEEEEEeeeCC
Confidence 00 0011345677889999999999
Q ss_pred CeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeec
Q psy12425 322 PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFD 401 (591)
Q Consensus 322 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~ 401 (591)
+.+.|++++..+....++.+...+....|.|.++..+|+|.|+|.|.|..|.......|.|..+|.+...+. ...+.
T Consensus 129 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~---~~~~~ 205 (284)
T 2rik_A 129 IKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPH---PVETL 205 (284)
T ss_dssp CEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCC---CEEEC
T ss_pred CEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCC---cceec
Confidence 999999999999888887777777788999999999999999999999999998999999999988776553 35578
Q ss_pred CCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEec
Q psy12425 402 KGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 402 ~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
.|+.+.|.|.+.|.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|..|..+..+.|.|+
T Consensus 206 ~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 206 KGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp TTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 899999999999999999999999999988888888877778899999999999999999999999999988888875
No 26
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=1.9e-37 Score=322.12 Aligned_cols=539 Identities=14% Similarity=0.090 Sum_probs=102.0
Q ss_pred CceeeeecC--CeEEEEEEeccCCCceEEEEEC--CEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeee
Q psy12425 2 PNALYIPEG--DNTKVKIFYAGDQPMEVSLTKN--GRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 77 (591)
Q Consensus 2 p~~~~v~~G--~~~~l~C~~~~~p~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~ 77 (591)
|..+.+.+| ++++|.|.+.+ |.+.+.|+|+ +..+....+.... +....|.|.+++.+|.|.|+|.+.+..+..
T Consensus 133 ~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 209 (772)
T 3v2a_R 133 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISW--DSKKGFTIPSYMISYAGMVFCEAKINDESY 209 (772)
T ss_dssp EEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCSSSCEE--ETTTEEEEEGGGTTTCSEEEEEEEETTEEE
T ss_pred ceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCCceeec--CCCCCeEecCCChhhCeEEEEEEEECCceE
Confidence 356788999 99999999985 7889999997 6655444322211 123479999999999999999999875544
Q ss_pred EEE-EEEEEecCCCCCC--CCc-ceEEecCceEEEEecCCCC-CCCcceeeEEEEEEecCCCceEEE-------EeecCc
Q psy12425 78 SGT-FTINITGLPGPPI--GPL-DVSEITKHTCTLHWNPPKY-DGGLKVTHYVVERRDISMPHWICI-------STTCHD 145 (591)
Q Consensus 78 ~~~-~~l~v~~~p~~p~--~~~-~~~~~~~~~~~l~w~~p~~-~~~~~~~~y~~~~~~~~~~~~~~~-------~~~~~~ 145 (591)
... ..+.+...+.+.. .+. .+....+..+.|.|..... .....+.+|.-............. ......
T Consensus 210 ~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (772)
T 3v2a_R 210 QSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL 289 (772)
T ss_dssp ECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEE
T ss_pred EEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEE
Confidence 332 3444433221111 111 1345567888888864321 111122222111110000000000 111234
Q ss_pred ceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCC-CCCeEEeecCCeEEEEEecCCCCCCcceEEE
Q psy12425 146 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPP-GIPVVTQVGGDFVNLSWDKPLDDGGSRIQGY 224 (591)
Q Consensus 146 ~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y 224 (591)
..+.|..+...+.+.|+|.+.|..|...... .+.+..+......+ .........|..++|.|.....+. ..+.+|
T Consensus 290 ~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~---~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~-~~v~W~ 365 (772)
T 3v2a_R 290 STLTIDGVTRSDQGLYTCAASSGLMTKKNST---FVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPP-PEIKWY 365 (772)
T ss_dssp EEEEESSCCSTTCSEEEEEEECSSCEEEEEE---EEEEECCCC-------------------------------------
T ss_pred EEEEECcCCcCCCeEEEEEEEcCCcceeEEE---EEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCC-CeEEEE
Confidence 5789999999999999999998766422211 11111111111111 112334556788899998643221 122222
Q ss_pred EEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeec---cc
Q psy12425 225 WIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL---RN 301 (591)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~---~~ 301 (591)
.+..... . .........|.|.++...|.|.|+|.|.|..|....+ ....+.+. .+|.+.... ..
T Consensus 366 -~~g~~l~----~--~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s-~~~~l~v~-----~~P~~~~~~~~~~~ 432 (772)
T 3v2a_R 366 -KNGIPLE----S--NHTIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQS-HVVSLVVY-----VPPQIGEKSLISPV 432 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -ECCEeCC----C--CceEccceeEEEecCChhcCceEEEEEEECCcCeEEE-EEEEEEEe-----cCCcccccccCCCc
Confidence 1111100 0 1111134788999999999999999999988754322 23333333 344443221 11
Q ss_pred cceeccccEEEEEEEcCCCCCe-eEEecCCccC--------------------------------CCC-CceEEEEe--C
Q psy12425 302 ANAIQNHNAQFQCTITGCPKPT-ISWLKGSREI--------------------------------TPS-ARHHIFAE--G 345 (591)
Q Consensus 302 ~~~~~g~~~~l~c~~~~~p~~~-v~W~~~~~~~--------------------------------~~~-~~~~~~~~--~ 345 (591)
..+.+|+.+.|.|.+.+.|.+. +.|++++... ... .+..+... .
T Consensus 433 ~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~ 512 (772)
T 3v2a_R 433 DSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNK 512 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcce
Confidence 2378899999999999999997 9999863221 000 01111111 1
Q ss_pred CeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeC
Q psy12425 346 DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRD 425 (591)
Q Consensus 346 ~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~ 425 (591)
....|.|.++ +|+|.|+|.|.|..|.......+.|..+|.+...+. ..+.+|+.+.|.|.+.+.|.+.+.|+++
T Consensus 513 ~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~----~~~~~G~~v~l~C~~~~~p~~~v~W~k~ 586 (772)
T 3v2a_R 513 TVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPD----MQPTEQESVSLWCTADRSTFENLTWYKL 586 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEECCceeeccCC----cccccCCceEEEEeccCCCCCCcEEEEc
Confidence 1246777776 789999999999999998888999988887765543 2357899999999999999999999999
Q ss_pred CeEeeeccceEE--------------------EecCCeeEEEEeccCCCcceeEEEEEEcCCCccc--eEEEEEe--cCC
Q psy12425 426 NEVIESGGHFHV--------------------ETSERHAILTIRDASNVDTAPYRVVAENDLGMDS--AIVKIQI--SDR 481 (591)
Q Consensus 426 ~~~~~~~~~~~~--------------------~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~--~~~~~~v--~~~ 481 (591)
+..+........ ........|.|.++..+|+|.|+|.|.|..|... ....+.+ ..+
T Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~ 666 (772)
T 3v2a_R 587 GPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVA 666 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCC
Confidence 876543222111 1111234599999999999999999999665542 3344444 333
Q ss_pred CCCCCCCe-eeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCC
Q psy12425 482 PDPPQFPT-VEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVY 560 (591)
Q Consensus 482 p~~p~~~~-~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~ 560 (591)
|.--..+. .....+..+.|.|...... ...+.+|+-.. ...... ..........|.|.++...+.+.|+|.|.|.+
T Consensus 667 P~~~~~~~~~~v~~g~~~~l~C~~~g~P-~p~v~W~k~g~-~l~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 743 (772)
T 3v2a_R 667 PTITGNLENQTTSIGESIEVSCTASGNP-PPQIMWFKDNE-TLVEDS-GIVLKDGNRNLTIRRVRKEDEGLYTCQACSVL 743 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEeecCCCceEEeCCCCEEEEEEeCccC-CCeEEEEECCe-ECcCCC-CeEEcCCCcEEEECcCCHHHCEEEEEEEEeCC
Confidence 32111111 1122356678888752111 11122221100 000000 00111224689999999999999999999999
Q ss_pred cCCCCCCCc
Q psy12425 561 GRSDPSTTS 569 (591)
Q Consensus 561 G~~~~s~~~ 569 (591)
|....+...
T Consensus 744 G~~~~~~~l 752 (772)
T 3v2a_R 744 GCAKVEAFF 752 (772)
T ss_dssp ---------
T ss_pred cceeEEEEE
Confidence 987665443
No 27
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=9.4e-34 Score=279.73 Aligned_cols=383 Identities=13% Similarity=0.137 Sum_probs=250.9
Q ss_pred EEcCCeeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEE
Q psy12425 70 LSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFI 149 (591)
Q Consensus 70 ~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (591)
+.+..|.....+.|.|..+|.....+..+....+..++|.|.... .+. +.+....- . .......+.
T Consensus 18 ~~~~~g~~~~~i~l~v~~pP~i~~~~~~~~v~~G~~v~l~C~~~~-----~v~---W~~~~~~~-~-----~~~~~~~L~ 83 (524)
T 2ec8_A 18 LRVQTGSSQPSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPG-----FVK---WTFEILDE-T-----NENKQNEWI 83 (524)
T ss_dssp C--------------CCCCCEEESCCSEEECCTTSCEEEEEECTT-----EEE---EEEESSSC-C-----EEECSSEEE
T ss_pred hhhhcCCCCCeEEcCCCCCCccCCCCceEEEeCCCeEEEEEeCCc-----eEE---EcCCCccc-c-----ccCccceEE
Confidence 345556566667788877775433333455667889999998432 232 22222111 1 233567899
Q ss_pred EcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEee
Q psy12425 150 VQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 229 (591)
Q Consensus 150 i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~ 229 (591)
|.++...+.+.|+|.|.| |. +.. ..+.+..+..+... ........|..++|.|.....+ ...+.+|..+..
T Consensus 84 I~~~~~~D~G~Y~C~a~n--g~---~~~-~~l~V~~p~~~~~~--~~~~~v~~G~~v~l~C~~~~~~-~~~v~W~~~~g~ 154 (524)
T 2ec8_A 84 TEKAEATNTGKYTCTNKH--GL---SNS-IYVFVRDPAKLFLV--DRSLYGKEDNDTLVRCPLTDPE-VTNYSLKGCQGK 154 (524)
T ss_dssp ESSCCSTTCEEEEEEETT--SC---EEE-EEEECCCSSCSBCC--CCCCCEETTSCEEECCCBSCCC-CSCEEEECSSSC
T ss_pred EcccchhhCEEEEEeecC--Cc---ceE-EEEEECCCCccccc--ccceEEEcCCeEEEECcCCCCc-cceEEEEccCCc
Confidence 999999999999999998 42 111 11222211111111 1223445788999999885322 123333321111
Q ss_pred ecCCCccEEEEeeecCCceeeecCcccCCcE-EEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccc
Q psy12425 230 EVGSDAWQRVNVAICAPSQINIPNLIEGRQY-EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNH 308 (591)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 308 (591)
...... +. .......|.|.++...|.| .|+|.|.|..|.... ....+.+.. ....+|.+...+....+.+|+
T Consensus 155 ~l~~~~--~~--~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s--~~~~l~V~~-~~~~~p~i~~~~~~~~v~~G~ 227 (524)
T 2ec8_A 155 PLPKDL--RF--IPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLS--EKFILKVRP-AFKAVPVVSVSKASYLLREGE 227 (524)
T ss_dssp CCCSSC--EE--EEETTTEEEEESCCGGGTTCEEEEEEC----CCCC--CCEECCEEC-CCCSCCEEECSCSEEEEETTS
T ss_pred CcCCCC--ce--eECCCccEEEeccchhhCCceEEEEEEECCceEEE--EEEEEEEEe-CCCCCCcEEecCCcceEEcCC
Confidence 111111 11 1224568999999999999 999999997654322 223333321 113578888777777899999
Q ss_pred cEEEEEEEcCCCCCe-eEEecCCccC--CCCCceEEE---EeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEE
Q psy12425 309 NAQFQCTITGCPKPT-ISWLKGSREI--TPSARHHIF---AEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 382 (591)
Q Consensus 309 ~~~l~c~~~~~p~~~-v~W~~~~~~~--~~~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v 382 (591)
.+.|.|.+.+.|.+. +.|++++..+ .......+. .......|.|.++..+|+|.|+|.|.|..|.......|.|
T Consensus 228 ~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 307 (524)
T 2ec8_A 228 EFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEV 307 (524)
T ss_dssp CEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEE
Confidence 999999999999887 9999998873 322222221 1122458999999999999999999999999988999999
Q ss_pred ecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCe-EEEeeCCeEeeecc-ceEEEecC----CeeEEEEeccCCCcc
Q psy12425 383 MTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPK-ITWYRDNEVIESGG-HFHVETSE----RHAILTIRDASNVDT 456 (591)
Q Consensus 383 ~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~-v~W~~~~~~~~~~~-~~~~~~~~----~~~~l~i~~~~~~~~ 456 (591)
..+|.+...+.......+..|+.+.|.|.+.|.|.|. +.|+++|..+.... .+.....+ ....|.|.++..+|+
T Consensus 308 ~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 387 (524)
T 2ec8_A 308 VDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEG 387 (524)
T ss_dssp ESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGC
T ss_pred eccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccC
Confidence 9998876655434456788999999999999999999 99999999887654 33322222 357899999999999
Q ss_pred eeEEEEEEcCCCccceEEEEEecCCC
Q psy12425 457 APYRVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 457 g~y~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
|.|+|.|.|..|..+..+.|.|..+|
T Consensus 388 G~Y~C~a~N~~g~~~~~~~l~V~~~P 413 (524)
T 2ec8_A 388 GTYTFLVSNSDVNAAIAFNVYVNTKP 413 (524)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECEEE
T ss_pred eEEEEEEEecCceEEEEEEEEEecCC
Confidence 99999999999999999999998765
No 28
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=6.7e-33 Score=259.89 Aligned_cols=316 Identities=10% Similarity=0.091 Sum_probs=219.7
Q ss_pred ceeeeecCCeEEEEEEeccCCCceEEEEECCEEeec--------------CCceeEEE---eCCeEEEEEcccCCCCceE
Q psy12425 3 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQS--------------DDRFKFTV---LDDYIIIFIKEIRKEDAGD 65 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~--------------~~~~~~~~---~~~~~~l~i~~~~~~d~g~ 65 (591)
+.+.+.+|+++.|.|.+.+.|.+.+.|+|++..+.. ..|+.+.. .+...+|.|.+++.+|+|.
T Consensus 2 e~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~ 81 (363)
T 1wio_A 2 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 81 (363)
T ss_dssp EEEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEE
T ss_pred CeEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEE
Confidence 457899999999999999999999999999864221 11222111 2235689999999999999
Q ss_pred EEEEEEcCCeeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCc
Q psy12425 66 YTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHD 145 (591)
Q Consensus 66 Y~c~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 145 (591)
|+|.|.|..+ .+.|.|...+..|..
T Consensus 82 Y~C~~~n~~~----~~~l~V~~~~~~~~~--------------------------------------------------- 106 (363)
T 1wio_A 82 YICEVEDQKE----EVQLLVFGLTANSDT--------------------------------------------------- 106 (363)
T ss_dssp EEEEETTEEE----EEEEEEEEEEESSCS---------------------------------------------------
T ss_pred EEEEEEECCC----cEEEEEEeCCCCCce---------------------------------------------------
Confidence 9999988743 445555431111000
Q ss_pred ceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEE
Q psy12425 146 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYW 225 (591)
Q Consensus 146 ~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~ 225 (591)
.+..+....+.|.+... ....++|..+ + ..+
T Consensus 107 ------~v~~G~~v~l~C~~~~~-----------------------------------p~~~v~W~~~---~-~~~---- 137 (363)
T 1wio_A 107 ------HLLQGQSLTLTLESPPG-----------------------------------SSPSVQCRSP---R-GKN---- 137 (363)
T ss_dssp ------SEESBSCEEEEEECCTT-----------------------------------CCCCEEEECS---S-SCE----
T ss_pred ------EEecCCCEEEEEEcCCC-----------------------------------CCCeEEEEcC---C-Ccc----
Confidence 01133444555544210 0023667653 1 111
Q ss_pred EEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeecccccee
Q psy12425 226 IDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAI 305 (591)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 305 (591)
......|.|.++...|.|.|+|.|.|..+... ....+.+.. +|... ....+.
T Consensus 138 -----------------~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~---~~~~l~v~~-----~p~~~---~~~~~~ 189 (363)
T 1wio_A 138 -----------------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVE---FKIDIVVLA-----FQKAS---SIVYKK 189 (363)
T ss_dssp -----------------EEESSEEEECSBCGGGCEECEEEEEETTEEEE---ECCEECEEC-----CSCSE---EEEEEE
T ss_pred -----------------cccceEEEEeeCChhcCCEEEEEEecCCCeEE---EEEEEEEec-----CCCCC---CceEEe
Confidence 11346899999999999999999998644321 223333331 22111 345578
Q ss_pred ccccEEEEEEEcC-----CCCCeeEEecCCccCCC--------CCceEEEE----------eCCeEEEEEcceecccceE
Q psy12425 306 QNHNAQFQCTITG-----CPKPTISWLKGSREITP--------SARHHIFA----------EGDTYTLIINSVYGVDADE 362 (591)
Q Consensus 306 ~g~~~~l~c~~~~-----~p~~~v~W~~~~~~~~~--------~~~~~~~~----------~~~~~~l~i~~~~~~d~g~ 362 (591)
+|+.+.|.|.+.+ .|.+.+.|++++..+.. ..++.+.. .+...+|.|.++..+|+|.
T Consensus 190 ~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 269 (363)
T 1wio_A 190 EGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGS 269 (363)
T ss_dssp TBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEE
T ss_pred cCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcE
Confidence 8999999998877 78899999999988765 34444432 2234589999999999999
Q ss_pred EEEEEEeC--CcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCe--EEEeeCCeEeeeccceEEE
Q psy12425 363 YVCRAVNK--GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPK--ITWYRDNEVIESGGHFHVE 438 (591)
Q Consensus 363 y~c~a~n~--~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~--v~W~~~~~~~~~~~~~~~~ 438 (591)
|+|.|.|. .|.....+.|.|.. ..|..+.|.|.+.|.|.|. +.|++++..+..
T Consensus 270 Y~C~a~n~~~~g~~~~~~~l~V~~----------------v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~------- 326 (363)
T 1wio_A 270 GNLTLALEAKTGKLHQEVNLVVMR----------------ATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV------- 326 (363)
T ss_dssp EEEEECBTTTTCCEEEEEEEEEEE----------------ECCCSSSEEEEEESSCCTTCCEEEECSSSSCSE-------
T ss_pred EEEEEEEhhhcCeEEEEEeEEEEE----------------ecCCCeeEEEEEccccCCCccEEEEeCCCceee-------
Confidence 99999999 89888888888862 1278899999999999998 999999977653
Q ss_pred ecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEe
Q psy12425 439 TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 478 (591)
Q Consensus 439 ~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v 478 (591)
...|.|.++..+|+|.|+|.|.|. |....+..+.|
T Consensus 327 ----~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V 361 (363)
T 1wio_A 327 ----SKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKV 361 (363)
T ss_dssp ----EESSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEE
T ss_pred ----eeeeeeeeeccccceeEEEEEecC-CeEEEecceEe
Confidence 344677899999999999999965 55555555554
No 29
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=1.2e-31 Score=258.85 Aligned_cols=369 Identities=14% Similarity=0.182 Sum_probs=233.8
Q ss_pred CceeeeecCCeEEEEEEeccCCC----ceEEEEECC--EEe------------ecCCceeEEEeCCeEEEEEcccCCCCc
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQP----MEVSLTKNG--RVV------------QSDDRFKFTVLDDYIIIFIKEIRKEDA 63 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~----~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 63 (591)
|..+.+.+|+++.|.|.+.+.|. +.+.|+|++ ..+ ....|+.+...+...+|.|.+++.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (438)
T 1qgc_4 8 PASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDV 87 (438)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCC
Confidence 77899999999999999988876 489999963 221 113566666666778999999999999
Q ss_pred eEEEEEEEcCCeee-EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEee
Q psy12425 64 GDYTVNLSNSSGSV-SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT 142 (591)
Q Consensus 64 g~Y~c~~~n~~g~~-~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 142 (591)
|.|+|.|.|..+.. ...+.|.|.....+|.. .+. ++.
T Consensus 88 G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v--~~~------------~~~---------------------------- 125 (438)
T 1qgc_4 88 ATYYCQQSNEVPLTFGAGTKLDLKRADAAPTV--SIF------------PPS---------------------------- 125 (438)
T ss_dssp EEEEEEECSSTTCCBCCCEEEEECCCCBCCEE--EEE------------CCC----------------------------
T ss_pred eeEEEEEecCCCccccCceeEEecCCCCCCEE--Eec------------CCC----------------------------
Confidence 99999999987643 33456666432212210 000 000
Q ss_pred cCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceE
Q psy12425 143 CHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQ 222 (591)
Q Consensus 143 ~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~ 222 (591)
. ....+....+.|.+.... ...+.++|... +..+.
T Consensus 126 --~------~~~~g~~~~l~C~~~g~~---------------------------------p~~~~v~W~k~----g~~~~ 160 (438)
T 1qgc_4 126 --S------EQLTSGGASVVCFLNNFY---------------------------------PKDINVKWKID----GSERQ 160 (438)
T ss_dssp --H------HHHHTTEEEEEEEEEEEB---------------------------------SSCEEEEEEET----TEEEC
T ss_pred --h------hhccCCceEEEEEEcccc---------------------------------CCCcEEEEEEC----CEEcC
Confidence 0 001233556667664210 00146778762 11111
Q ss_pred ---EEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeec
Q psy12425 223 ---GYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL 299 (591)
Q Consensus 223 ---~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~ 299 (591)
.+...........+. ....|.|.++...|.|.|+|.|.|..|.. ...+.+... .++.....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~-------~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~-----~~~~~~~~~---~~~~~~~~~ 225 (438)
T 1qgc_4 161 NGVLNSWTDQDSKDSTYS-------MSSTLTLTKDEYERHNSYTCEATHKTSTS-----PIVKSFNRN---ECEVMLVES 225 (438)
T ss_dssp TTEEEEEECCCTTTCCEE-------EEEEEEEEHHHHHTCCEEEEEEEETTCSS-----CEEEEEETT---C-CCEEEEE
T ss_pred CCceeccccccCCCCcEE-------EEEEEEEeCcccCCCCeEEEEEEecccCC-----ceecccccc---cceeEEecC
Confidence 000011100111110 12468899999999999999999987643 122333211 122333344
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecC--CccCC-----------------CCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKG--SREIT-----------------PSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
....+.+|+.+.|.|.+.|.| .+.+.|+++ +..+. ...++.+..+ +...+|.|.+++
T Consensus 226 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 305 (438)
T 1qgc_4 226 GGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLR 305 (438)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCC
Confidence 566788999999999999988 679999986 43221 1245555544 346689999999
Q ss_pred cccceEEEEEEEeCCc-----ceeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEeeC
Q psy12425 357 GVDADEYVCRAVNKGG-----VKSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRD 425 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~ 425 (591)
.+|+|.|+|.|.|..+ .......+.|.. +|.+...+ ....+..|+.+.|.|.+.|. |.+ .+.|+++
T Consensus 306 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~---~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~ 382 (438)
T 1qgc_4 306 SADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLA---PGSAAAAASMVTLGCLVKGYFPEPVTVTWNSG 382 (438)
T ss_dssp GGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEEC---CCGGGCCSSEEEEEEEEESCBSSCCEEEEGGG
T ss_pred hhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcC---cccccccCCcEEEEEEeccccCCCcEEEEecC
Confidence 9999999999999554 223445677763 23322111 11234679999999999997 887 9999999
Q ss_pred CeEeeeccceEEEecC---CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEE
Q psy12425 426 NEVIESGGHFHVETSE---RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKI 476 (591)
Q Consensus 426 ~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~ 476 (591)
|..+.......+...+ ..+.|.|.++..+| |.|+|.|.|..|.......+
T Consensus 383 g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 383 SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp TCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred CCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 9876532211122211 12468999998888 99999999999986555444
No 30
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=247.12 Aligned_cols=169 Identities=19% Similarity=0.292 Sum_probs=140.7
Q ss_pred EEEEEEEcC-CCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEec----
Q psy12425 310 AQFQCTITG-CPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMT---- 384 (591)
Q Consensus 310 ~~l~c~~~~-~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~---- 384 (591)
+.|.|.+.+ .|.+.+.|++++..+....++.+...+....|.|.++..+|+|.|+|.|.|..|.......+.+..
T Consensus 125 ~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~ 204 (317)
T 2y25_A 125 IQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEA 204 (317)
T ss_dssp EEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHH
T ss_pred cEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeecccc
Confidence 456787766 578899999999999888888888888888999999999999999999999988887777766531
Q ss_pred ----------------CCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEec-CCeeEEE
Q psy12425 385 ----------------APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETS-ERHAILT 447 (591)
Q Consensus 385 ----------------~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~l~ 447 (591)
.|.+... ......+..|+.+.|.|.+.|.|.|.+.|+++|..+....++.+... +....|.
T Consensus 205 ~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~ 282 (317)
T 2y25_A 205 YAEFQRLKQAAIAEKNRARVLGG--LPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFT 282 (317)
T ss_dssp HHHHHHHHHHHHHTTTSCEEEEB--CCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEE
T ss_pred chhhcccCCcccCcCCCCccccc--CCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEE
Confidence 1111111 12345678999999999999999999999999999988777777665 5678999
Q ss_pred EeccCCCcceeEEEEEEcCCCccceEEEEEecC
Q psy12425 448 IRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 448 i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
|.++..+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 283 i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 283 INGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp EBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 999999999999999999999999998888864
No 31
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=9.5e-29 Score=247.80 Aligned_cols=396 Identities=12% Similarity=0.113 Sum_probs=251.9
Q ss_pred ceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEE
Q psy12425 146 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYW 225 (591)
Q Consensus 146 ~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~ 225 (591)
..+.|.++...+.+.|+|.|.|..|..... ..+.+..+...... ........|..++|.|.....+....+.+|.
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~---~~l~V~~~p~~~~~--~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k 149 (585)
T 2ocw_A 75 FVVNIAQLSQDDSGRYKCGLGINSRGLSFD---VSLEVSQGPGLLND--TKVYTVDLGRTVTINCPFKTENAQKRKSLYK 149 (585)
T ss_pred EEEEECCCCcccCEEEEEEcccCCCCceEE---EEEEEecCccccCC--CccEEEEcCCCEEEEEEecCCCCCccEEEEE
Confidence 468899999999999999999877653211 11122111111111 1234456788899999875333222344332
Q ss_pred EEeeec----CC-----Ccc-EEEEeeec----CCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccC
Q psy12425 226 IDKHEV----GS-----DAW-QRVNVAIC----APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAK 291 (591)
Q Consensus 226 ~~~~~~----~~-----~~~-~~~~~~~~----~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~ 291 (591)
-..... .. ..+ .+...... ....|.|.++...|.|.|+|.|.|..|... ....+.+.. .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~---~~~~l~V~~----~ 222 (585)
T 2ocw_A 150 QIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNK---KNADLQVLK----P 222 (585)
T ss_pred CCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCcccc---ceEEEEEcc----C
Confidence 110000 00 000 01111110 112799999999999999999998877532 344555542 2
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCCC---CeeEEe-cCCccCC------------CCCceEEEEe--CCeEEEEEc
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCPK---PTISWL-KGSREIT------------PSARHHIFAE--GDTYTLIIN 353 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~---~~v~W~-~~~~~~~------------~~~~~~~~~~--~~~~~l~i~ 353 (591)
+|. .+.+.+|+.+.|.|.+ +.+. +.+.|+ +++.... ...++.+... .+.++|.|.
T Consensus 223 ~p~------~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~ 295 (585)
T 2ocw_A 223 EPE------LVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVIT 295 (585)
T ss_pred CCc------eeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEc
Confidence 232 2346789999999997 4444 678896 7773211 1233444322 344589999
Q ss_pred ceecccceEEEEEEEeCCccee----eeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeE----EEee-
Q psy12425 354 SVYGVDADEYVCRAVNKGGVKS----TKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKI----TWYR- 424 (591)
Q Consensus 354 ~~~~~d~g~y~c~a~n~~g~~~----~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v----~W~~- 424 (591)
++..+|+|.|+|.|.|..+... ..+.|.|..+|.+...+ ....+..|+.+.|.|.+.+.|.+.+ .|++
T Consensus 296 ~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~---~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~ 372 (585)
T 2ocw_A 296 GLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSP---TVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGA 372 (585)
T ss_pred cCChhhCEEEEEEEEcCCCccccCceeeEEEEEecccccccCC---cceEEEeCCcEEEEEecCCCCCccEEEEEEEEcc
Confidence 9999999999999999533332 67889999888876554 3456788999999999999999987 7999
Q ss_pred -CCe--Eeee---------ccceEEEec--CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCC-CCCe
Q psy12425 425 -DNE--VIES---------GGHFHVETS--ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP-QFPT 489 (591)
Q Consensus 425 -~~~--~~~~---------~~~~~~~~~--~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p-~~~~ 489 (591)
+|. .+.. ..++.+... .....|.|.++..+|+|.|+|.| |..|..+..+.|.|...|... ....
T Consensus 373 ~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~ 451 (585)
T 2ocw_A 373 QNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGN 451 (585)
T ss_pred CCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCc
Confidence 886 4432 223333322 23345999999999999999999 999998888999887643211 1112
Q ss_pred eeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCC-----------ceEEec-eeeeeEEEEcCcccCceEEEEEEEE
Q psy12425 490 VEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS-----------SWIRVG-NTRFTTMAITGLSPGHQYEFRVYAE 557 (591)
Q Consensus 490 ~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~-----------~~~~~~-~~~~~~~~i~~l~~~~~Y~~~v~A~ 557 (591)
+....+..+.|.|.......+.+.. .+.|...+.. .+.... ......|.|.++...+.+.|+|.|.
T Consensus 452 ~~v~~G~~v~L~C~~~~~~~~~p~~--~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 529 (585)
T 2ocw_A 452 VTAVLGETLKVPCHFPCKFSSYEKY--WCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVK 529 (585)
T ss_pred eeEecCCcEEEEEEecCCCCCCccE--EEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeE
Confidence 2334567899999864222222322 3333322210 012221 2344699999999999999999999
Q ss_pred cCCcCCCCC
Q psy12425 558 NVYGRSDPS 566 (591)
Q Consensus 558 n~~G~~~~s 566 (591)
|..|.+...
T Consensus 530 N~~G~~~~~ 538 (585)
T 2ocw_A 530 QGHFYGETA 538 (585)
T ss_pred eCCCccEEE
Confidence 999976654
No 32
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-30 Score=238.80 Aligned_cols=272 Identities=26% Similarity=0.417 Sum_probs=192.1
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeC--CeEEEEEcccCC-CCceEEEEEEEcCCeeeE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD--DYIIIFIKEIRK-EDAGDYTVNLSNSSGSVS 78 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~-~d~g~Y~c~~~n~~g~~~ 78 (591)
|.++.+.+|+++.|.|.+.|.|.+.|.|+|+|..+... ++.+.... ....|.|.+++. +|+|.|+|.|.|..|..+
T Consensus 13 p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~ 91 (304)
T 2yd9_A 13 PKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEIT 91 (304)
T ss_dssp CCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEEC
T ss_pred CCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEE
Confidence 67889999999999999999999999999999988544 44444322 347899999998 999999999999887765
Q ss_pred EEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcE
Q psy12425 79 GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQE 158 (591)
Q Consensus 79 ~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 158 (591)
..+.|.|...+..|.
T Consensus 92 ~~~~l~V~~~~~~p~----------------------------------------------------------------- 106 (304)
T 2yd9_A 92 VHAKLTVLREDQLPS----------------------------------------------------------------- 106 (304)
T ss_dssp CEEEEEEECGGGCCT-----------------------------------------------------------------
T ss_pred EEEEEEEeccccCCC-----------------------------------------------------------------
Confidence 556555543110000
Q ss_pred EEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEE
Q psy12425 159 YLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQR 238 (591)
Q Consensus 159 y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 238 (591)
T Consensus 107 -------------------------------------------------------------------------------- 106 (304)
T 2yd9_A 107 -------------------------------------------------------------------------------- 106 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcC
Q psy12425 239 VNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITG 318 (591)
Q Consensus 239 ~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~ 318 (591)
..|.+...+....+..|+.+.|.|.+.|
T Consensus 107 ----------------------------------------------------~~p~i~~~~~~~~v~~g~~v~l~C~~~g 134 (304)
T 2yd9_A 107 ----------------------------------------------------GFPNIDMGPQLKVVERTRTATMLCAASG 134 (304)
T ss_dssp ----------------------------------------------------TCCEEEECCCCEEEETTSCEEECCEEEC
T ss_pred ----------------------------------------------------CCCeeecCCccEEEeCCCeEEEEEECcc
Confidence 0011111111233567888999999999
Q ss_pred CCCCeeEEecCCccCCCCC---ceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeee-eEEEEe---cCCcccCC
Q psy12425 319 CPKPTISWLKGSREITPSA---RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTK-AELIIM---TAPKFNVP 391 (591)
Q Consensus 319 ~p~~~v~W~~~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~-~~l~v~---~~p~~~~~ 391 (591)
.|.+.+.|++++..+.... ++....++ .|.|.++..+|+|.|+|.|.|..|..... ..+.|. .+|.+...
T Consensus 135 ~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~ 211 (304)
T 2yd9_A 135 NPDPEITWFKDFLPVDPSASNGRIKQLRSG---ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSIL 211 (304)
T ss_dssp SSCCEEEEEETTEECCGGGGTTSEEECTTS---CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEEC
T ss_pred CCCCeEEEEECCEECcCCCCcceEEeCCCe---EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEec
Confidence 9999999999988776432 22222222 79999999999999999999999877543 556664 34555443
Q ss_pred CCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccc
Q psy12425 392 PRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDS 471 (591)
Q Consensus 392 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~ 471 (591)
+. ...+..|+.+.|.|.+.|.|.|.+.|++++..+.....+. .....|.+.++ .|+|.|+|.|.|..|...
T Consensus 212 ~~---~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~ 282 (304)
T 2yd9_A 212 PM---SHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVAMSSLGVIE 282 (304)
T ss_dssp CC---CBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEEEETTEEEE
T ss_pred CC---ceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--ccCEEEEEEEEeCCCcEE
Confidence 32 3456889999999999999999999999999886554321 23455666665 589999999999999999
Q ss_pred eEEEEEecCCCC
Q psy12425 472 AIVKIQISDRPD 483 (591)
Q Consensus 472 ~~~~~~v~~~p~ 483 (591)
..+.|.|..++.
T Consensus 283 ~~~~l~V~~~~~ 294 (304)
T 2yd9_A 283 AVAQITVKSLPK 294 (304)
T ss_dssp EEEEEC------
T ss_pred EEEEEEEecCcc
Confidence 999999987663
No 33
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.98 E-value=2.1e-29 Score=257.94 Aligned_cols=461 Identities=16% Similarity=0.147 Sum_probs=278.8
Q ss_pred cCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEccc-CCCCceEEEEEEEcCCeeeEEE-EEEEEe
Q psy12425 9 EGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEI-RKEDAGDYTVNLSNSSGSVSGT-FTINIT 86 (591)
Q Consensus 9 ~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~Y~c~~~n~~g~~~~~-~~l~v~ 86 (591)
.++++.|.|.+.|.|.+.+.|.|+|..+..-. ...+.|..+ .....+.|+|.+.|..|..... +.+.+.
T Consensus 90 ~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~---------~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~ 160 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTRTWN---------RAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGH 160 (731)
T ss_dssp CSEEEEEEEEETTCCCCSEEEEECCCCCSSCE---------EEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESS
T ss_pred CcceEEEEEecCCCCccceeEEEeCCcCCcee---------EEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeec
Confidence 45689999999999999999999998763221 124556555 3333578888887777765322 222222
Q ss_pred cCCCCCC--CCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEe---ecCcceEEEcCCcCCcEEEE
Q psy12425 87 GLPGPPI--GPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST---TCHDTTFIVQGLTEGQEYLF 161 (591)
Q Consensus 87 ~~p~~p~--~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~---~~~~~~~~i~~l~~~~~y~~ 161 (591)
..+.+|. .+..+....+..+.|.|....... ..+.+|.. ..+.....+..... ......+.|.++.+.+.|.|
T Consensus 161 ~~~~~p~~~~~~~~~v~~G~~v~l~C~~~g~P~-p~i~~W~~-~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y 238 (731)
T 2v5y_A 161 PCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTV-AGDRLWLQ-GIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKY 238 (731)
T ss_dssp CCSSSCEECCCCCEEEETTSCEEEEEEEESCCC-TTCEEEEE-ESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEE
T ss_pred ccccccccccccceEEeCCCcEEEEEEeCCCCC-CceeEEEe-cCCCccccccceEEeccccceEEEEEcccccccCeEE
Confidence 2222222 223455667888999997533111 12331211 01111111111111 11246899999999999999
Q ss_pred EEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEe
Q psy12425 162 HVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV 241 (591)
Q Consensus 162 ~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 241 (591)
+|.|.|..|.+..... .+.+. .+|.++..+.+.......+.|+|..+..+++.++..|.++++.. ...|.....
T Consensus 239 ~c~A~n~~G~~~s~~~--~l~V~---~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~-~~~~~~~~~ 312 (731)
T 2v5y_A 239 RCMIRTEGGVGISNYA--ELVVK---EPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTA-SGSWNDRQP 312 (731)
T ss_dssp EEEEEETTEEEECCCE--EEEEE---CCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEES-SSSCEEEEE
T ss_pred EEEEECCCCCcceeeE--EEEEe---cCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEEC-CCCceEEec
Confidence 9999999986322221 12222 25666667777778889999999987655667899999999875 456765543
Q ss_pred eecCCceeeecCcccCCcEEEEEEEE--cCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCC
Q psy12425 242 AICAPSQINIPNLIEGRQYEFRVYAQ--NEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC 319 (591)
Q Consensus 242 ~~~~~~~~~i~~l~~~~~~~y~c~a~--n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~ 319 (591)
.....+.|.+|.+++.|.|+|.|. |..|.+.++.. ..+......++.+|.. |.......
T Consensus 313 --~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~-~~~~t~~~~p~~~P~~----------------~~~~~~~~ 373 (731)
T 2v5y_A 313 --VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPA-LRTRTKCADPMRGPRK----------------LEVVEVKS 373 (731)
T ss_dssp --CCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCC-EEEECCCCCCSCCCEE----------------EEEEEECS
T ss_pred --cCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCc-EEeeecCCCCCCCCce----------------eEEEeccC
Confidence 356899999999999999999999 99998775543 2222222222223322 11222222
Q ss_pred CCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCccccee
Q psy12425 320 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAY 399 (591)
Q Consensus 320 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~ 399 (591)
....+.|........... ...|........+
T Consensus 374 ~sv~l~W~~p~~~~~~~~----------------------~~~y~v~y~~~~~--------------------------- 404 (731)
T 2v5y_A 374 RQITIRWEPFGYNVTRCH----------------------SYNLTVHYCYQVG--------------------------- 404 (731)
T ss_dssp SCEEEEEECCCHHHHCSS----------------------SCEEEEEEEEESS---------------------------
T ss_pred CeEEEEEECCCcccccce----------------------eeeEEEEEEEccC---------------------------
Confidence 333566754321110000 0011111000000
Q ss_pred ecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEec
Q psy12425 400 FDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 400 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
+.. -.|.. ..+........++|.+|.+...|.|++.|.|..|.+. +..+.+.
T Consensus 405 ---~~~--------------~~~~~----------~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~ 456 (731)
T 2v5y_A 405 ---GQE--------------QVREE----------VSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQ 456 (731)
T ss_dssp ---SSE--------------EEEEE----------EECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEE
T ss_pred ---CCC--------------cccee----------EEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEE
Confidence 000 00000 0011123456788999999999999999999999863 4444444
Q ss_pred C---CCCCCCCCeeee-ecCCeeEEEeeccccCCCcceeeEEEEeeeCCCC---------ceEEeceeeeeEEEEcCccc
Q psy12425 480 D---RPDPPQFPTVED-IGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS---------SWIRVGNTRFTTMAITGLSP 546 (591)
Q Consensus 480 ~---~p~~p~~~~~~~-~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~---------~~~~~~~~~~~~~~i~~l~~ 546 (591)
+ +|.+|..+.+.. ...+++.|+|++|...+| .+.+|+|+|+..... .+........+.++|.+|.|
T Consensus 457 T~~~~P~~p~~~~~~~~~~~~si~l~W~~P~~~~g-~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 535 (731)
T 2v5y_A 457 TDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYG-VITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYP 535 (731)
T ss_dssp CCCCCCCCCCTTTCEEEEETTEEEEECCCCSCCSS-CCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCT
T ss_pred ccCCCCCCCCcceEEeeecCCeEEEEEcCCCCCCC-CccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCC
Confidence 3 455543223332 247899999998875555 899999999865421 12222344567999999999
Q ss_pred CceEEEEEEEEcCCcCCCCCCCcceEEeccccccCCCCC
Q psy12425 547 GHQYEFRVYAENVYGRSDPSTTSDLITTYGELLSGMEAP 585 (591)
Q Consensus 547 ~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~~~~p~~~~~~ 585 (591)
++.|.|+|+|.|..|.|++|. ..++|...+|..|+.+
T Consensus 536 ~t~Y~~~V~A~n~~G~g~~s~--~~~~T~~~~P~~p~~~ 572 (731)
T 2v5y_A 536 GTTYSFTIRASTAKGFGPPAT--NQFTTKISAPSMPAYE 572 (731)
T ss_dssp TEEEEEEEEEEETTEEEEEEE--EEEECCCCCCCC----
T ss_pred CCEEEEEEEEEeCCccCCCcc--cEEEcCCCCCCCCCcc
Confidence 999999999999999999984 3456776677666543
No 34
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.98 E-value=5.5e-31 Score=256.13 Aligned_cols=350 Identities=13% Similarity=0.089 Sum_probs=215.1
Q ss_pred ceEEecCceEEEEecCCCCCCCcceeeEEEEEEec---CCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCC
Q psy12425 97 DVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI---SMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGP 173 (591)
Q Consensus 97 ~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~ 173 (591)
.+....+.+++|.|.... .+...|.+.+... ...... .......++.|.++...+.+.|+|.+.|..|...
T Consensus 57 ~~~v~~g~~~~L~c~~~~----~~~~~~~W~~~~~~l~~~~~~~--~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~ 130 (527)
T 3qs9_E 57 AVEVDVSASITLQVLVDA----PGNISCLWVFKHSSLNCQPHFD--LQNRGVVSMVILKMTETQAGEYLLFIQSEATNYT 130 (527)
T ss_dssp EEEECSSCCEEEEEECSC----CSSCEEEEEETTEEECCCCBC-------CEEEEEESSCCSSSCSEEEEEEEC--CEEE
T ss_pred eEEEeccccEEEEEEEec----CCceeEEEEecCCccCcccccC--CCcceEEEEEECcCChhhCeeEEEEEEeccccEE
Confidence 345556788888887432 2223344433211 111111 1112234589999999999999999998766432
Q ss_pred CCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecC
Q psy12425 174 PLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPN 253 (591)
Q Consensus 174 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 253 (591)
... .+.... .+...+..+.. ...+..+.|.|.....+. ..+.++ ....... ... .............
T Consensus 131 ~~~---~v~v~~--~~~~~~~~p~~-~~~~~~~~L~C~a~G~P~-P~i~W~-~~~~~~~--~~~---~~~~~~~~~~~~~ 197 (527)
T 3qs9_E 131 ILF---TVSIRN--TLLYTLRRPYF-RKMENQDALVCISESVPE-PIVEWV-LCDSQGE--SCK---EESPAVVKKEEKV 197 (527)
T ss_dssp EEE---EEEEC-------CEEEEEE-EECSSSSCEEEEEEESSC-CEEEEE-EC------------------CEEECCSE
T ss_pred EEE---EEEECC--ceeeccCCCcE-EecCCceEEEEEEceecC-CeEEEE-ECCCCCc--ccc---ccCCcEEEEeeee
Confidence 110 011110 00001111111 122444567776532221 112221 1100000 000 0000111223344
Q ss_pred cccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEc-CCCCCeeEEecCCcc
Q psy12425 254 LIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTISWLKGSRE 332 (591)
Q Consensus 254 l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~-~~p~~~v~W~~~~~~ 332 (591)
+...|.|.|+|.|.|..|.... ....+.+. .+|.+ .+....+.+|+.+.|.|.+. +.|.+.+.|++++..
T Consensus 198 ~~~~d~G~Y~C~A~N~~G~~~~--~~~~l~V~-----~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~ 268 (527)
T 3qs9_E 198 LHELFGTDIRCCARNELGRECT--RLFTIDLN-----QTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKA 268 (527)
T ss_dssp ECCCCSSCEEEEEECSSCEEEE--ECEEEESS-----SCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSC
T ss_pred ccccCCEEEEEEEEeCCCcccc--eEEEEEEe-----ccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEE
Confidence 5688999999999999886432 22344443 22322 33466788999999999996 999999999999988
Q ss_pred CCCCCceEEE-Ee-C----CeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeE
Q psy12425 333 ITPSARHHIF-AE-G----DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV 406 (591)
Q Consensus 333 ~~~~~~~~~~-~~-~----~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~ 406 (591)
+.....+... .. + ...+|.|.++..+|+|.|+|.|.|. ....+.|.|..+|.+...+.. ....+..|+.+
T Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~-~~~~v~~G~~v 344 (527)
T 3qs9_E 269 LEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSS-EDYEIDQYEEF 344 (527)
T ss_dssp CCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSC-CEECCCTTCCC
T ss_pred CCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCc-ccEEEcCCCeE
Confidence 7654333221 11 1 1236999999999999999999987 667788888888876654433 23567889999
Q ss_pred EEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCC
Q psy12425 407 VVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 407 ~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
.|.|.+.|.|.|.+.|+++|..+.....+. .....|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 345 ~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P 416 (527)
T 3qs9_E 345 CFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKP 416 (527)
T ss_dssp CEEEEEEEESCCEEEEEETTEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCC
T ss_pred EEEEEEEecCCCEEEEEECCEECcCCcccc----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCC
Confidence 999999999999999999999886554422 245689999999999999999999999999999999998776
No 35
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.98 E-value=4.7e-29 Score=225.57 Aligned_cols=268 Identities=22% Similarity=0.308 Sum_probs=215.5
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.||.+...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+...+|.|.++..+|+|.|+|.|.|.
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 83 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNV 83 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEEC
Confidence 57888888888889999999999999999999999999999998888888777777889999999999999999999999
Q ss_pred CcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEec
Q psy12425 371 GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRD 450 (591)
Q Consensus 371 ~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 450 (591)
.|.......|.|..+|.+...+. ....+..|+.+.|.|.+.|.|.+.+.|++++..+.....+.+........|.|.+
T Consensus 84 ~g~~~~~~~l~V~~~p~~~~~~~--~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (284)
T 2rik_A 84 AGKDSCSAQLGVQEPPRFIKKLE--PSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYN 161 (284)
T ss_dssp TEEEEEEEEEEEECCCEEEECCC--SEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECS
T ss_pred CceEEEEEEEEccCCCcccccCC--CceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECC
Confidence 99988889999999887654332 3345788999999999999999999999999999887777777777889999999
Q ss_pred cCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCCCe-eeeecCCeeEEEeeccccCCCcceeeEEEEee---eCCCC
Q psy12425 451 ASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPT-VEDIGHDSLALVWRAPIWDGGSNITNYIVEKR---EHPMS 526 (591)
Q Consensus 451 ~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~-~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~---~~~~~ 526 (591)
+...|.|.|+|.|.|..|..+..+.+.+..+|.....+. .....+..+.|.|..... +...+.+... .....
T Consensus 162 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~----p~~~v~W~~~~~~~~~~~ 237 (284)
T 2rik_A 162 LSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGT----PPFQVSWHKDKRELRSGK 237 (284)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSS----SCCEEEEEETTEEECBTT
T ss_pred CCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEec----CCCEEEEEECCEECcCCC
Confidence 999999999999999999999999999988774322221 223356679999986321 2222222221 11122
Q ss_pred ceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCC
Q psy12425 527 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSD 564 (591)
Q Consensus 527 ~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~ 564 (591)
.+..........+.|.++...+.+.|+|.|.|..|...
T Consensus 238 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 275 (284)
T 2rik_A 238 KYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYT 275 (284)
T ss_dssp TEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred CEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCcee
Confidence 23333333446899999999999999999999999643
No 36
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.97 E-value=5.8e-28 Score=243.13 Aligned_cols=444 Identities=16% Similarity=0.139 Sum_probs=266.2
Q ss_pred CCCceEEEEEEEcCCeeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCC------
Q psy12425 60 KEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM------ 133 (591)
Q Consensus 60 ~~d~g~Y~c~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~------ 133 (591)
.++.|.+.| +.|..|..-......+...|.+|...+.+......++.|+|.++...++.++. |.|+++...+
T Consensus 132 ~~c~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~ 209 (680)
T 1zlg_A 132 NECSGVKKC-CSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSED 209 (680)
T ss_pred ccCCCcccc-ccccccccccccceeeecccccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCcc
Confidence 456788888 45666654222223356778888433778888999999999988655566777 9999987633
Q ss_pred --CceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEee--cCC---eE
Q psy12425 134 --PHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQV--GGD---FV 206 (591)
Q Consensus 134 --~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~---~v 206 (591)
..|..+.. .....+.+.+|.+++.|.|+|.|.|..|....+.....+.......+|.+|..+.+... ..+ ++
T Consensus 210 ~~~~w~~v~~-~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv 288 (680)
T 1zlg_A 210 DATHWQTVAQ-TTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTV 288 (680)
T ss_pred ccCceEEEEe-cCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEE
Confidence 56776654 45678999999999999999999999984333332223332222357778888888777 677 99
Q ss_pred EEEEecCCCCCCcceEEEEEEeeec-------CCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCc
Q psy12425 207 NLSWDKPLDDGGSRIQGYWIDKHEV-------GSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 279 (591)
Q Consensus 207 ~l~w~~~~~~~~~~~~~y~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~ 279 (591)
.|+|.+|...+ .++.+|.|+++.. ....|...... .....++|.+|.++..|.|++.|.|..|.+..+...
T Consensus 289 ~l~W~pP~~~~-g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 366 (680)
T 1zlg_A 289 TIVWDLPEEPD-IPVHHYKVFWSWMVSSKSLVPTKKKRRKTTD-GFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAK 366 (680)
T ss_pred EEEecCCCCCC-CceeEEEEEEEecccccccCCccceEEEEEc-CCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCc
Confidence 99999876443 5799999998822 12245544332 244789999999999999999999999988766554
Q ss_pred ceEEEcCCCccCCCeEEeeccccce--eccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceec
Q psy12425 280 NSVQIKDPMAAKAPEIIVPLRNANA--IQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYG 357 (591)
Q Consensus 280 ~~~~~~~~~~~~~p~~~~~~~~~~~--~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 357 (591)
..+.+.... .+|. +.++.+ .....+.|. .....+...+.|...... .....|. +.......
T Consensus 367 ~~v~~~T~~--~~P~----p~~l~~~~~s~tsi~lp-~~~~~~~~~l~W~~P~~~-~~~~~y~---------v~w~~~~~ 429 (680)
T 1zlg_A 367 VSLHFTSTH--ATNN----KEQLVKTRKGGIQTQLP-FQRRRPTRPLEVGAPFYQ-DGQLQVK---------VYWKKTED 429 (680)
T ss_pred eeEEEECCC--CCCC----ccccccccccCcccccc-ccccCCCccccccCCccc-CCcceEE---------EEEeCCCC
Confidence 444443221 1121 011111 111122221 001122223456432100 0000011 11100000
Q ss_pred ccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeee-ccceE
Q psy12425 358 VDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIES-GGHFH 436 (591)
Q Consensus 358 ~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~-~~~~~ 436 (591)
.....|. |.|......... .....
T Consensus 430 ~~v~~Y~-------------------------------------------------------V~w~~~~~~~~~~~~~~~ 454 (680)
T 1zlg_A 430 PTVNRYH-------------------------------------------------------VRWFPEACAHNRTTGSEA 454 (680)
T ss_pred CccceEE-------------------------------------------------------EEEeeeecccCCCCccee
Confidence 0001111 111100000000 00000
Q ss_pred EEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEE-----------------EEec--------CCCCCCCC----
Q psy12425 437 VETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVK-----------------IQIS--------DRPDPPQF---- 487 (591)
Q Consensus 437 ~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~-----------------~~v~--------~~p~~p~~---- 487 (591)
.........++|.+|.+...|.+++.|.|..|.+..... +... ..+.+|.+
T Consensus 455 ~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~~~~~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v~~~P~~l~~~ 534 (680)
T 1zlg_A 455 SSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSAS 534 (680)
T ss_pred eeeeccCceEEecCCCCCCeEEEEEEEecCCCCCCccccceeCCCccccccCCccccccCCCCccccccccCCcccccee
Confidence 011223567889999999999999999999985421100 0000 01256777
Q ss_pred CeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCc----e--EEe-----ceeeeeEEEEcCcccCceEEEEEEE
Q psy12425 488 PTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSS----W--IRV-----GNTRFTTMAITGLSPGHQYEFRVYA 556 (591)
Q Consensus 488 ~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~----~--~~~-----~~~~~~~~~i~~l~~~~~Y~~~v~A 556 (591)
+.+...+.. +.|+|++|..++++.|++|.|.|+...... + ... .......++|.+|.|++.|.|+|+|
T Consensus 535 v~v~~~~~t-i~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A 613 (680)
T 1zlg_A 535 FIVQDVNIT-GHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQV 613 (680)
T ss_pred EEEeccCce-EEEEecCCCCCCCCCceeEEEEEEEccCCCccccccceeeecccccCCcccEEEecCCCCCceEEEEEEE
Confidence 445555555 999999987554569999999998653222 1 111 1234679999999999999999999
Q ss_pred EcCCcCCCCCCCcceEEeccccccCCC
Q psy12425 557 ENVYGRSDPSTTSDLITTYGELLSGME 583 (591)
Q Consensus 557 ~n~~G~~~~s~~~~~~~t~~~~p~~~~ 583 (591)
.|..|.|+. .. ..++|+..+|..|.
T Consensus 614 ~n~~G~G~~-~~-~~~~T~~~~P~~P~ 638 (680)
T 1zlg_A 614 LTPGGEGPA-TI-KTFRTPELPPSSAH 638 (680)
T ss_pred EcCCCcCCC-cc-eEEECCCCCCCCCC
Confidence 999999988 43 44566665554443
No 37
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.97 E-value=2.6e-29 Score=228.20 Aligned_cols=173 Identities=25% Similarity=0.461 Sum_probs=132.5
Q ss_pred eeccccEEEEEEEcCCCCCeeEEecCCccCCC--CCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce--eeeeE
Q psy12425 304 AIQNHNAQFQCTITGCPKPTISWLKGSREITP--SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK--STKAE 379 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~--~~~~~ 379 (591)
+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+..++ +|.|.++...|.|.|+|.|.|..+.. .....
T Consensus 110 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~ 186 (291)
T 2wim_A 110 FKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDII 186 (291)
T ss_dssp EETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEE
T ss_pred hcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCC---CEEEEecchhhCEEEEEEEEECCCCeeEEeeEE
Confidence 34567788888888888889999998877653 2334333333 69999999999999999999987554 34567
Q ss_pred EEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeE
Q psy12425 380 LIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY 459 (591)
Q Consensus 380 l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y 459 (591)
+.+..+|.+...+.. ....+..|+.+.|.|.+.|.|.|.+.|+++|..+.....+.+. .....|.|.++...|.|.|
T Consensus 187 ~~v~~~p~~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y 263 (291)
T 2wim_A 187 VIVNVPPAISMPQKS-FNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPY 263 (291)
T ss_dssp EEEEBCCCCBCSCSE-EECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEEC--STTCEEEEESCCSTTCEEE
T ss_pred EEeccCCccccCccc-ccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEc--CCccEEEEeeCCcccCEEE
Confidence 778888876654321 1335678999999999999999999999999998877666543 3467899999999999999
Q ss_pred EEEEEcCCCccceEEEEEecCCC
Q psy12425 460 RVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 460 ~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
+|.|.|..|..+..+.+.+..++
T Consensus 264 ~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 264 VCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp EEEEEETTEEEEEEEEEEC----
T ss_pred EEEEEECCCceeeeEEEEEEEec
Confidence 99999999999999999998765
No 38
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=6e-29 Score=228.42 Aligned_cols=170 Identities=15% Similarity=0.278 Sum_probs=133.7
Q ss_pred cceeccccEEEEEEEc-CCCCCeeEEecCCccCCCCCceEEEEe--CCeEEEEEcceecccceEEEEEEEeCCcceeeee
Q psy12425 302 ANAIQNHNAQFQCTIT-GCPKPTISWLKGSREITPSARHHIFAE--GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 378 (591)
Q Consensus 302 ~~~~~g~~~~l~c~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~ 378 (591)
..+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+..+ +...+|.|.++..+|+|.|+|.|.|..+....
T Consensus 117 ~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~-- 194 (312)
T 2y23_A 117 VEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHS-- 194 (312)
T ss_dssp EEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEE--
T ss_pred eEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEE--
Confidence 3467788999999998 899999999999999988877777654 55678999999999999999999865443332
Q ss_pred EEEEe---------------------cCCcccCCCCcccceeecCCCeEEEEEeeeccCCC-eEEEeeCCeEeeeccceE
Q psy12425 379 ELIIM---------------------TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFH 436 (591)
Q Consensus 379 ~l~v~---------------------~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~ 436 (591)
.+.+. .+|.+..+ ....+..|+.+.|.|.+.+.|.| .+.|++++..+..+.++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~----~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~ 270 (312)
T 2y23_A 195 TVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY----LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD 270 (312)
T ss_dssp EEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE----EEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC-
T ss_pred EEEEcchhhhhhcccccccccchhhccCCceeec----ceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEE
Confidence 23321 11222111 11457899999999999999998 999999999998766666
Q ss_pred EEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEec
Q psy12425 437 VETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 437 ~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
+. +....|.|.++..+|+|.|+|.|.|..|.....+.|.++
T Consensus 271 ~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 271 FK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp -----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred EE--CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 55 456899999999999999999999999999988888764
No 39
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=4.3e-27 Score=232.07 Aligned_cols=326 Identities=13% Similarity=0.141 Sum_probs=199.2
Q ss_pred CcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCccccc-CCCCCCCCC-CCCeEEeecCCeEEEEEecCCCCCCc-c
Q psy12425 144 HDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAK-SPYDKPSPP-GIPVVTQVGGDFVNLSWDKPLDDGGS-R 220 (591)
Q Consensus 144 ~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~-~~~~~p~~~-~~~~~~~~~~~~v~l~w~~~~~~~~~-~ 220 (591)
....+.|.++...+.+.|+|.|.|..|..........+.+. .+..+|... .........+..++|.|.....+... .
T Consensus 68 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~ 147 (523)
T 2rcj_C 68 TSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVT 147 (523)
T ss_pred CEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceE
Confidence 34579999999999999999999976532111111111111 101111100 01112233567889999875322211 2
Q ss_pred eEEEEEEeeecCCCccEEEEeeecC-----CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeE
Q psy12425 221 IQGYWIDKHEVGSDAWQRVNVAICA-----PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI 295 (591)
Q Consensus 221 ~~~y~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~ 295 (591)
+.+|. ................... ...|.|.++...|.|.|+|.|.|..|.... ...+.. ......+|.+
T Consensus 148 v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~---~~~~~~-~~~~~~~P~v 222 (523)
T 2rcj_C 148 VAWKA-DGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK---TVAPTE-CSASTKGPSV 222 (523)
T ss_pred EEEec-CCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCccccc---ceeeee-cCCCCcCCEE
Confidence 22221 1111111000000000000 135889999999999999999998774322 111111 1112345666
Q ss_pred EeeccccceeccccEEEEEEEcCC-CCC-eeEEecCCccCCCCCceEEEEeCC----eEEEEEcceecccceEEEEEEEe
Q psy12425 296 IVPLRNANAIQNHNAQFQCTITGC-PKP-TISWLKGSREITPSARHHIFAEGD----TYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 296 ~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
........+.+|+.+.|.|.+.|. |.+ .+.|++++..+.......+...++ ...|.|.++..+| |.|+|.|.|
T Consensus 223 ~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n 301 (523)
T 2rcj_C 223 FPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNH 301 (523)
T ss_pred EecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEe
Confidence 544344456899999999999886 877 899999987654221111111222 2379999999999 999999999
Q ss_pred CCcceeeeeEEEEecCCcccC-CCCcccceeecCCCeEEEEEeeeccCC----CeEEEeeCCeEeeeccceEEEec-C--
Q psy12425 370 KGGVKSTKAELIIMTAPKFNV-PPRFRDTAYFDKGENVVVKIPFTGYPK----PKITWYRDNEVIESGGHFHVETS-E-- 441 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~~p~~~~-~~~~~~~~~~~~g~~~~l~c~~~~~p~----~~v~W~~~~~~~~~~~~~~~~~~-~-- 441 (591)
..|.......+.+...|.+.. ++.. ...+..|+.+.|.|.+.|.|+ +.|.|+++|..+........... +
T Consensus 302 ~~g~~~~~~~l~v~~~P~~~~~~p~~--~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~ 379 (523)
T 2rcj_C 302 KPSNTKVDKRVEPLSLPSVFLFPPKP--KDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNST 379 (523)
T ss_pred CCCCcceEEecCCCcCceEEecCCCc--hhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCc
Confidence 999877777776666565432 2221 112577999999999998654 49999999998865443221111 1
Q ss_pred --CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEE
Q psy12425 442 --RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 442 --~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
..+.|.|..+..+|+|.|+|.|.|..|.......+.
T Consensus 380 ~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~ 417 (523)
T 2rcj_C 380 YRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTIS 417 (523)
T ss_pred EEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEE
Confidence 134688999999999999999999988776555554
No 40
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.96 E-value=1.4e-28 Score=237.25 Aligned_cols=367 Identities=14% Similarity=0.190 Sum_probs=218.5
Q ss_pred CceeeeecCCeEEEEEEeccCC--CceEEEEEC--CEEee-----------------cCCceeEEEe--CCeEEEEEccc
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQ--PMEVSLTKN--GRVVQ-----------------SDDRFKFTVL--DDYIIIFIKEI 58 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~ 58 (591)
|..+.+.+|+++.|.|.+.+.+ .+.+.|+|+ +..+. ...|+.+... .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (444)
T 1igt_B 7 SGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL 86 (444)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC
Confidence 5678999999999999998764 678999985 32210 1245555443 34579999999
Q ss_pred CCCCceEEEEEEEcCCeee---EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCc
Q psy12425 59 RKEDAGDYTVNLSNSSGSV---SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPH 135 (591)
Q Consensus 59 ~~~d~g~Y~c~~~n~~g~~---~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~ 135 (591)
+.+|+|.|.|.+.|..+.. ...+.|.|...+. ..| .+.. . ++.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~--~~P-~i~~--------~--~~~--------------------- 132 (444)
T 1igt_B 87 KSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKT--TAP-SVYP--------L--APV--------------------- 132 (444)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCC--BCC-EEEE--------E--CCC---------------------
T ss_pred CHHHCEEEEEEEecCCcccccccCcEEEEecCCCC--CCC-ceeE--------e--ccc---------------------
Confidence 9999999999999876542 2235666653211 111 0000 0 000
Q ss_pred eEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCC
Q psy12425 136 WICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLD 215 (591)
Q Consensus 136 ~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~ 215 (591)
..+..+....+.|.+.... | ..+.++|.....
T Consensus 133 ---------------~~~~~g~~v~L~C~~~g~~--------------------P-------------~p~~v~W~~~~~ 164 (444)
T 1igt_B 133 ---------------CGDTTGSSVTLGCLVKGYF--------------------P-------------EPVTLTWNSGSL 164 (444)
T ss_dssp ---------------SSCCCSSCEEEEEEEEEEB--------------------S-------------SCCEEEEGGGTB
T ss_pred ---------------ccCCCCCcEEEEEEEccee--------------------C-------------CCcEEEEecCCC
Confidence 0012456667778775210 0 014578876422
Q ss_pred CCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcC---------
Q psy12425 216 DGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKD--------- 286 (591)
Q Consensus 216 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~--------- 286 (591)
.. .+..+... . ....+ .....|.|.+....| |.|+|.|.|..|... ....+.+.+
T Consensus 165 ~~--~~~~~~~~-~--~~~~~-------~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~---~~~~i~~~~~~~~~~~~~ 228 (444)
T 1igt_B 165 SS--GVHTFPAV-L--QSDLY-------TLSSSVTVTSSTWPS-QSITCNVAHPASSTK---VDKKIEPRGPTIKPCPPC 228 (444)
T ss_dssp CT--TEEECCCE-E--ETTEE-------EEEEEEEECSTTTTT-SCCEEEEEETTTTEE---EEEECCCCCCSCCCCCCC
T ss_pred CC--CeEecCcc-c--cCCcE-------EEEEEEEEchhhcCC-CeEEEEEEeCCCCcc---eEEEeccCCCCcccCCcc
Confidence 11 01100000 0 00000 012467888888888 999999999877531 111111100
Q ss_pred ----CCccCCCeE-Eeeccccc-eeccccEEEEEEEcCCC----CCeeEEecCCccCCCCCceE-EEE-eC---CeEEEE
Q psy12425 287 ----PMAAKAPEI-IVPLRNAN-AIQNHNAQFQCTITGCP----KPTISWLKGSREITPSARHH-IFA-EG---DTYTLI 351 (591)
Q Consensus 287 ----~~~~~~p~~-~~~~~~~~-~~~g~~~~l~c~~~~~p----~~~v~W~~~~~~~~~~~~~~-~~~-~~---~~~~l~ 351 (591)
.....+|.+ ..++.... +..|+.+.|.|.+.|.+ .+.+.|++++..+....... ... ++ ...+|.
T Consensus 229 ~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 308 (444)
T 1igt_B 229 KCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALP 308 (444)
T ss_dssp SCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEE
T ss_pred ccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEE
Confidence 011235655 33333333 58899999999999873 36999999988775433221 111 11 134799
Q ss_pred EcceecccceEEEEEEEeCCcceeeeeEE----EEecCCcccCCCCcccceeecCCCeEEEEEeeec-cCCC-eEEEeeC
Q psy12425 352 INSVYGVDADEYVCRAVNKGGVKSTKAEL----IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKP-KITWYRD 425 (591)
Q Consensus 352 i~~~~~~d~g~y~c~a~n~~g~~~~~~~l----~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~ 425 (591)
|.++..+|.|.|+|.|.|..|.......+ .+..+|.+...+.. ...+. +..+.|.|.+.| .|.+ .|.|+++
T Consensus 309 I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~--~~~~~-~~~~~L~C~~~g~~P~~~~v~W~k~ 385 (444)
T 1igt_B 309 IQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPP--EEEMT-KKQVTLTCMVTDFMPEDIYVEWTNN 385 (444)
T ss_dssp CCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCC--GGGTT-SSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred EcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCC--hHHcc-CCeEEEEEEEEeeeCCCCEEEEEEC
Confidence 99999999999999999998876333333 23345554322211 11223 445999999998 4555 8999999
Q ss_pred CeEeeeccceEEE-ecCC----eeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 426 NEVIESGGHFHVE-TSER----HAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 426 ~~~~~~~~~~~~~-~~~~----~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
|..+......... ..+. .+.|.|.....+|.|.|+|.|.|..-.
T Consensus 386 g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l~ 434 (444)
T 1igt_B 386 GKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLH 434 (444)
T ss_dssp TEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTSG
T ss_pred CEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCcC
Confidence 9887432111111 1111 234666666667799999999998543
No 41
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.96 E-value=3.3e-28 Score=232.19 Aligned_cols=345 Identities=20% Similarity=0.246 Sum_probs=230.0
Q ss_pred EEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCc-----ccCCcEEEEEEEEcCCCC
Q psy12425 198 VTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNL-----IEGRQYEFRVYAQNEAGL 272 (591)
Q Consensus 198 ~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-----~~~~~~~y~c~a~n~~g~ 272 (591)
+....|..++|.|..........+.+|. +........-.+ ........+.|.++ +..|.|.|+|.|.+..+.
T Consensus 31 ~~v~~G~~v~L~C~~~~~~p~~~v~W~k-~g~~~~~~~~~~--~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~ 107 (403)
T 3laf_A 31 AVTMRGGNVLLNCSAESDRGVPVIKWKK-DGLILALGMDDR--KQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSG 107 (403)
T ss_dssp EEECTTCCEEECCEEECTTCCCEEEEEE-TTEECCTTSCTT--EEECTTSCEEECSCCCBTTBCSSCEEEEEEEECGGGC
T ss_pred eEEecCCcEEEEEEcCCCCCCceEEEEE-CCEECccCCccc--EEEecCCcEEEeeeeccCCCCCcceEEEEEEEeCCCc
Confidence 4455688899999875322211223221 111111000000 11123456677766 677999999999965432
Q ss_pred CCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCC---CCceEEEEeCCeEE
Q psy12425 273 SLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP---SARHHIFAEGDTYT 349 (591)
Q Consensus 273 ~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~---~~~~~~~~~~~~~~ 349 (591)
.. ......+.+. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..+.....++ +
T Consensus 108 ~~-~s~~~~l~v~-----~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~ 178 (403)
T 3laf_A 108 SI-ISRTAKVMVA-----GPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSG---A 178 (403)
T ss_dssp EE-ECCCEEEEEC-----CCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTS---C
T ss_pred cE-EEEEEEEEec-----CCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCc---e
Confidence 22 1233445554 467777777778889999999999999999999999999887743 2223222222 7
Q ss_pred EEEcceecccceEEEEEEEeCCcce-eeeeEEEEecCCcccCCCCc---ccceeecCCCeEEEEEeeeccCCCeEEEeeC
Q psy12425 350 LIINSVYGVDADEYVCRAVNKGGVK-STKAELIIMTAPKFNVPPRF---RDTAYFDKGENVVVKIPFTGYPKPKITWYRD 425 (591)
Q Consensus 350 l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~~l~v~~~p~~~~~~~~---~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~ 425 (591)
|.|.++..+|+|.|+|.|.|..|.. .....+.|...|....++.+ .....+..|+.+.|.|.+.+.|.+.+.|+++
T Consensus 179 L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~ 258 (403)
T 3laf_A 179 LQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRG 258 (403)
T ss_dssp EEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEET
T ss_pred EEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEEC
Confidence 9999999999999999999988765 45678888777654322111 1334567899999999999999999999999
Q ss_pred CeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCC---CCCCCeeeeecCCeeEEEe
Q psy12425 426 NEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPD---PPQFPTVEDIGHDSLALVW 502 (591)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~---~p~~~~~~~~~~~~v~l~W 502 (591)
+..+.......... ....|.|.++..+|.|.|+|.|.|..|..+..+.+.+..+|. .|.... ...+..+.|.|
T Consensus 259 ~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~--~~~g~~v~l~C 334 (403)
T 3laf_A 259 EEVIQLRSKKYSLL--GGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLY--AYESMDIEFEC 334 (403)
T ss_dssp TEECCCSSSSEEEE--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEE--CCTTCCEEECC
T ss_pred CeeccCCCceEEEC--CccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceE--EecCCeEEEEE
Confidence 98876543322222 246799999999999999999999999999999998887662 233222 23456788888
Q ss_pred eccccCCCcceeeEEEEeee---CCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCC
Q psy12425 503 RAPIWDGGSNITNYIVEKRE---HPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDP 565 (591)
Q Consensus 503 ~~p~~~~~~~~~~y~v~~~~---~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~ 565 (591)
..... +...+.+.... ......... ....+.|.++...+.+.|+|.|.|..|....
T Consensus 335 ~~~g~----p~p~v~W~~~g~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 393 (403)
T 3laf_A 335 AVSGK----PVPTVNWMKNGDVVIPSDYFQIV---GGSNLRILGVVKSDEGFYQCVAENEAGNAQS 393 (403)
T ss_dssp EEEEE----SCCEEEEEETTEECCCSSSEEEE---TTTEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred EEeec----cCCEEEEEECCEECCCCCcEEEe---cCccEEEeccccccCEEEEEEEEcCCceEEE
Confidence 75321 11122222110 111111111 2247999999999999999999999997543
No 42
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.96 E-value=8.1e-28 Score=218.57 Aligned_cols=275 Identities=15% Similarity=0.085 Sum_probs=204.4
Q ss_pred CCceeeeecCCeEEEEEEecc-------CCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcC
Q psy12425 1 MPNALYIPEGDNTKVKIFYAG-------DQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 73 (591)
Q Consensus 1 ~p~~~~v~~G~~~~l~C~~~~-------~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~ 73 (591)
.|.++.+.+|++++|.|.+.+ .|.+.|.|+|||+.|..+ ++++. .+....|.|.++... .|.|.|.|.+.
T Consensus 10 ~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~-~~~~~~L~i~~~~~~-~g~Y~C~a~~~ 86 (303)
T 1i1r_A 10 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTII-NRTASSVTFTDIASL-NIQLTCNILTF 86 (303)
T ss_dssp ESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEE-ETTEEEEEECSCCCS-EEEEEEEEEET
T ss_pred ccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeee-CCcEEEEEEcCcCCC-ceEEEEecccC
Confidence 378899999999999999985 488999999999998654 44433 344568999999998 49999999875
Q ss_pred Ceee--EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEc
Q psy12425 74 SGSV--SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQ 151 (591)
Q Consensus 74 ~g~~--~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 151 (591)
.+.. ...+.+.+..+|.+|.. +.+......++.|+|.++...+ .+..|.++++......|...........+.+.
T Consensus 87 g~~~~~~~~~~l~v~~~P~~P~~-l~~~~~~~~~v~l~W~~~~~~~--~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~ 163 (303)
T 1i1r_A 87 GQLEQNVYGITIISGLPPEKPKN-LSCIVNEGKKMRCEWDGGRETH--LETNFTLKSEWATHKFADCKAKRDTPTSCTVD 163 (303)
T ss_dssp TTEEEEEEEEEEEEECCCCCCEE-EEEEEETTSCCEEEEECCSCCS--SCCEEEEEEEETTEECCCEECCSSCTTEEECS
T ss_pred CCcceEEEEEEEeccCCCCCCee-eEEEECCCCcEEEEccCCCCCC--CCcCEEEEEEecCCCCccCCCcCCCceEEEEC
Confidence 2222 34467778888888876 5566666689999999887543 35689999876543333322234456789999
Q ss_pred CC-cCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEee--cCCeEEEEEecCCCCCCcceEEEEEEe
Q psy12425 152 GL-TEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQV--GGDFVNLSWDKPLDDGGSRIQGYWIDK 228 (591)
Q Consensus 152 ~l-~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~v~l~w~~~~~~~~~~~~~y~~~~ 228 (591)
+| .+++.|.|+|.|.|..|.+......... ....+|.+|..+.+... ..+++.|+|.+|...+ ..+.+|.|++
T Consensus 164 ~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~---~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~y 239 (303)
T 1i1r_A 164 YSTVYFVNIEVWVEAENALGKVTSDHINFDP---VYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKS-VIILKYNIQY 239 (303)
T ss_dssp SCCCTTSCEEEEEEEEETTEEEECCCEEECG---GGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGG-TSCEEEEEEE
T ss_pred CcCcccccEEEEEEEEcCCCCcccCCEEECH---HHeEecCCCcceEEEEecCCCCEEEEEECCCCCCC-cccEEEEEEE
Confidence 99 8999999999999999986532211111 11135666766666543 5689999999986544 4789999999
Q ss_pred eecCCCccEEEEee--ecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEc
Q psy12425 229 HEVGSDAWQRVNVA--ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 285 (591)
Q Consensus 229 ~~~~~~~~~~~~~~--~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~ 285 (591)
+..+...|..+... ......+.|.+|.++..|.|+++|.|..|.+.++..+..+.+.
T Consensus 240 ~~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~ 298 (303)
T 1i1r_A 240 RTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGI 298 (303)
T ss_dssp EETTCSSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEE
T ss_pred EeCCCCCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCcccee
Confidence 99887788765432 2345789999999999999999999999988887766655543
No 43
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=2.7e-29 Score=232.91 Aligned_cols=182 Identities=20% Similarity=0.363 Sum_probs=140.2
Q ss_pred ceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceE-EEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEE
Q psy12425 303 NAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH-IFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI 381 (591)
Q Consensus 303 ~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~ 381 (591)
.+.+|+.+.|.|.+.|.|.+.+.|++++..+....+.. ........+|.|.++...|+|.|+|.|.|..|.......|.
T Consensus 134 ~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 213 (334)
T 1ry7_B 134 AVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLD 213 (334)
T ss_dssp EEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEE
T ss_pred EecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEE
Confidence 36679999999999999999999999998876554331 12223345899999999999999999999999888888888
Q ss_pred EecCCccc--CCCCcccceeecCCCeEEEEEeeeccCCCeEEEee----CCeEeeeccceE--EEe-------cCCeeEE
Q psy12425 382 IMTAPKFN--VPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYR----DNEVIESGGHFH--VET-------SERHAIL 446 (591)
Q Consensus 382 v~~~p~~~--~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~----~~~~~~~~~~~~--~~~-------~~~~~~l 446 (591)
|...+... ..........+..|+.+.|.|.+.|.|.|.+.|++ +|..+....... +.. ......|
T Consensus 214 V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 293 (334)
T 1ry7_B 214 VLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVL 293 (334)
T ss_dssp EECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCE
T ss_pred EecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEE
Confidence 88643211 11111234567889999999999999999999999 676665433211 111 1123489
Q ss_pred EEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCC
Q psy12425 447 TIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDP 484 (591)
Q Consensus 447 ~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~ 484 (591)
.|.++...|+|.|+|.|.|..|.....+.|.|...|.+
T Consensus 294 ~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 331 (334)
T 1ry7_B 294 SLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEE 331 (334)
T ss_dssp EECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC
T ss_pred EEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCC
Confidence 99999999999999999999999999999999877644
No 44
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.96 E-value=3.6e-26 Score=222.02 Aligned_cols=367 Identities=13% Similarity=0.149 Sum_probs=216.7
Q ss_pred CceeeeecCCeEEEEEEeccCC--CceEEEEECC--EE---ee--------------cCCceeEEEe--CCeEEEEEccc
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQ--PMEVSLTKNG--RV---VQ--------------SDDRFKFTVL--DDYIIIFIKEI 58 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~~--~~---~~--------------~~~~~~~~~~--~~~~~l~i~~~ 58 (591)
|..+.+.+|++++|.|.+.+.+ .+.+.|+|+. .. +. ...|+.+... +...+|.|.++
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (475)
T 1iga_A 8 SGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSL 87 (475)
T ss_pred CCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCC
Confidence 6789999999999999998764 6789999952 21 10 1234444432 34578999999
Q ss_pred CCCCceEEEEEEEcCCee------eEEEEEEEEecC-CCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEec
Q psy12425 59 RKEDAGDYTVNLSNSSGS------VSGTFTINITGL-PGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI 131 (591)
Q Consensus 59 ~~~d~g~Y~c~~~n~~g~------~~~~~~l~v~~~-p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~ 131 (591)
+++|+|.|.|.+.|..|. ....+.|.|... +.+|.. ... ++
T Consensus 88 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i----~~~----------~~------------------ 135 (475)
T 1iga_A 88 RPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKV----FPL----------SL------------------ 135 (475)
T ss_pred ChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeE----Eec----------Cc------------------
Confidence 999999999999998752 223356666532 111110 000 00
Q ss_pred CCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEe
Q psy12425 132 SMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWD 211 (591)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~ 211 (591)
.....+....+.|.+... .|. ..+.|+|.
T Consensus 136 -------------------~~~~~g~~v~L~C~~~g~--------------------~P~------------~p~~v~W~ 164 (475)
T 1iga_A 136 -------------------CSTQPDGNVVIACLVQGF--------------------FPQ------------EPLSVTWS 164 (475)
T ss_pred -------------------cccCCCCeEEEEEEEeee--------------------cCC------------CceEEEEc
Confidence 001245566677776511 000 01467786
Q ss_pred cCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCC----
Q psy12425 212 KPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP---- 287 (591)
Q Consensus 212 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~---- 287 (591)
...... .+..+. .........+. ....|.|......|.|.|+|.|.|..+.. ....+.+..+
T Consensus 165 ~~~~~~--~~~~~~-~~~~~~~g~~~-------~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~----~~~~v~l~V~~~~~ 230 (475)
T 1iga_A 165 ESGQGV--TARNFP-PSQDASGDLYT-------TSSQLTLPATQCLAGKSVTCHVKHYTNPS----QDVTVPCPVPSTPP 230 (475)
T ss_pred CCCccc--ceEeCC-ceecCCCCcEE-------EEEEEEechhHcCCCceEEEEEEECCCCc----eeeeEecccccCcc
Confidence 521100 010000 00000000110 11357788888889999999999987632 1222221110
Q ss_pred -----------CccCCCeE-EeeccccceeccccEEEEEEEcCCCC---CeeEEecCCccCCCCCce-EEEE-eC---Ce
Q psy12425 288 -----------MAAKAPEI-IVPLRNANAIQNHNAQFQCTITGCPK---PTISWLKGSREITPSARH-HIFA-EG---DT 347 (591)
Q Consensus 288 -----------~~~~~p~~-~~~~~~~~~~~g~~~~l~c~~~~~p~---~~v~W~~~~~~~~~~~~~-~~~~-~~---~~ 347 (591)
....+|.+ ...+....+.+|+.+.|.|.+.|.++ +.|.| .+ ..+...... .... ++ ..
T Consensus 231 ~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~~-~~~~~~~~~~~~~~~~g~~~~~ 308 (475)
T 1iga_A 231 TPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TP-SSGKSAVQGPPERDLCGCYSVS 308 (475)
T ss_pred cccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-CC-CCcCCccccCceECCCCCEEEE
Confidence 00024544 33333344689999999999998754 68999 43 333221111 1111 11 12
Q ss_pred EEEEEcceecccceEEEEEEEeCCcceeeeeEEEE---ecCCcccCCCCcccceeecCCCeEEEEEeeeccCC--CeEEE
Q psy12425 348 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII---MTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK--PKITW 422 (591)
Q Consensus 348 ~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v---~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~--~~v~W 422 (591)
..|.|.++..+|.|.|+|.|.|..|.......+.+ ..+|.+...+. ....+..|+.+.|.|.+.|.++ +.|.|
T Consensus 309 ~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~--~~~~v~~g~~~~L~C~~~g~~P~~~~v~W 386 (475)
T 1iga_A 309 SVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPP--PSEELALNELVTLTCLARGFSPKDVLVRW 386 (475)
T ss_pred EEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECC--ChHHhccCCceEEEEEEeeeECCCCEEEE
Confidence 36999999999999999999999887654445532 44555543222 1122467899999999998633 59999
Q ss_pred eeCCeEeeeccceEE--Eec----C----CeeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 423 YRDNEVIESGGHFHV--ETS----E----RHAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 423 ~~~~~~~~~~~~~~~--~~~----~----~~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
+++|..+........ ... + ..+.|.|.....+|.|.|+|.|.|....
T Consensus 387 ~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 387 LQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred EECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 999998865431111 111 1 1245677777778899999999998654
No 45
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.96 E-value=4.1e-27 Score=213.75 Aligned_cols=271 Identities=19% Similarity=0.248 Sum_probs=193.5
Q ss_pred EeecCCeEEEEEecCCCCCCcceEEEEEEeeecC-CCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCC
Q psy12425 199 TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVG-SDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 277 (591)
Q Consensus 199 ~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~ 277 (591)
....|..++|.|.....+....+.+|.-...... ................|.|.++...|.|.|+|.|.|..|.. ..
T Consensus 13 ~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~--~~ 90 (291)
T 1qz1_A 13 EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQ--SE 90 (291)
T ss_dssp EEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCE--EE
T ss_pred eEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCe--eE
Confidence 3456788888888753321122222210111111 11111222222345689999999999999999999987642 12
Q ss_pred CcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCC--ceEEEEeCCeEEEEEcce
Q psy12425 278 ASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA--RHHIFAEGDTYTLIINSV 355 (591)
Q Consensus 278 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~ 355 (591)
....+.+. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ++....++ .|.|.++
T Consensus 91 ~~~~l~v~-----~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~ 162 (291)
T 1qz1_A 91 ATVNVKIF-----QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN---YLQIRGI 162 (291)
T ss_dssp EEEEEEEE-----CCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTS---CEEETTC
T ss_pred EEEEEEee-----ccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCC---cEEEccC
Confidence 33444443 46777777777888999999999999999999999999988775433 33332232 6999999
Q ss_pred ecccceEEEEEEEeCCcce--eeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeecc
Q psy12425 356 YGVDADEYVCRAVNKGGVK--STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGG 433 (591)
Q Consensus 356 ~~~d~g~y~c~a~n~~g~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~ 433 (591)
..+|+|.|+|.|.|..+.. .....+.|..+|.+...+.. ....+..|+.+.|.|.+.|.|.|.+.|+++|..+....
T Consensus 163 ~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~ 241 (291)
T 1qz1_A 163 KKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSI-VNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEE 241 (291)
T ss_dssp CGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSE-EEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC-
T ss_pred ccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccc-cccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCC
Confidence 9999999999999976543 34567777777776543321 23456889999999999999999999999999887554
Q ss_pred c--eEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecC
Q psy12425 434 H--FHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 434 ~--~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
. ..+........|.|.++..+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 242 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 242 EDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp -CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 1 2233344567899999999999999999999999998888888754
No 46
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.96 E-value=1.6e-27 Score=225.79 Aligned_cols=327 Identities=13% Similarity=0.104 Sum_probs=195.2
Q ss_pred eEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCC
Q psy12425 197 VVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 276 (591)
Q Consensus 197 ~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s 276 (591)
.+....|..+.|.|.....+. +...|............. .........|.|.+++..|.|.|+|.|.|..|...
T Consensus 57 ~v~V~~G~~v~L~C~v~g~P~--p~i~W~~~~~~l~~~~~~--~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~-- 130 (423)
T 3qs7_E 57 AVEVDVSASITLQVLVDAPGN--ISCLWVFKHSSLNCQPHF--DLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYT-- 130 (423)
T ss_dssp EEEECSSCCEEEEEECSCCSS--CEEEEEETTEEECCCCBC-------CEEEEEESSCCSSSCSEEEEEEEC--CEEE--
T ss_pred cEEEecCCcEEEEEEEEcCCC--CeEEEEECCCccCcccee--ccccceEEEEEEeecCcccCEEEEEEEEcCCCcEE--
Confidence 566678999999999854221 222222111111110000 00001123689999999999999999999877532
Q ss_pred CCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCC---ceEEEEeCCeEEEEEc
Q psy12425 277 SASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA---RHHIFAEGDTYTLIIN 353 (591)
Q Consensus 277 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~---~~~~~~~~~~~~l~i~ 353 (591)
....+.+. .+|.+. .........|..+.|.|.+.|.|.|.|.|++++....... ...+.... .
T Consensus 131 -~~~~l~V~-----~~p~~~-~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~-------~ 196 (423)
T 3qs7_E 131 -ILFTVSIR-----NTLLYT-LRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEE-------K 196 (423)
T ss_dssp -EEEEEEEC----------C-EEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECC-------S
T ss_pred -EEEEEEEe-----cCcccc-ccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccc-------e
Confidence 33445554 233332 1122234567888999999999999999999876542211 00111111 1
Q ss_pred ceecccceEEEEEEEeCCcceee-eeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeec-cCCCeEEEeeCCeEeee
Q psy12425 354 SVYGVDADEYVCRAVNKGGVKST-KAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKPKITWYRDNEVIES 431 (591)
Q Consensus 354 ~~~~~d~g~y~c~a~n~~g~~~~-~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~~v~W~~~~~~~~~ 431 (591)
-+...|+|.|+|.|.|..|.... ...|.|..+|... + ....+.+|+.+.|.|.+.| .|.|.+.|++++..+..
T Consensus 197 ~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~--~---~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~ 271 (423)
T 3qs7_E 197 VLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTT--L---PQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEE 271 (423)
T ss_dssp EECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSS--T---TEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCG
T ss_pred EEecccCeEEEEEEEcCCCCcceeeEEEEEecCCccC--C---CceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccc
Confidence 12578999999999999997644 3566666655542 2 2456789999999999998 67899999999987755
Q ss_pred ccceEEEe------cCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCC---CCCCeeeeecCCeeEEEe
Q psy12425 432 GGHFHVET------SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDP---PQFPTVEDIGHDSLALVW 502 (591)
Q Consensus 432 ~~~~~~~~------~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~---p~~~~~~~~~~~~v~l~W 502 (591)
...+.... ......|.|.++..+|+|.|+|.|.|. .+..+.|.|..+|.. |....+....+..+.|.|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C 348 (423)
T 3qs7_E 272 GNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSV 348 (423)
T ss_dssp GGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEE
T ss_pred cceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEE
Confidence 43332111 112457999999999999999999998 677778888776531 211122222345566666
Q ss_pred eccccCCCcceeeEEEEeeeCCCCceEEecee---------eeeEEEEcCcccCceEEEEEEEEcCCcCCCC
Q psy12425 503 RAPIWDGGSNITNYIVEKREHPMSSWIRVGNT---------RFTTMAITGLSPGHQYEFRVYAENVYGRSDP 565 (591)
Q Consensus 503 ~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~---------~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~ 565 (591)
.. ...+.....|.+.+.. ....+....+...+.+.|+|.|.|.+|....
T Consensus 349 ~~--------------~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~ 406 (423)
T 3qs7_E 349 RF--------------KAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTK 406 (423)
T ss_dssp EE--------------EEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEE
T ss_pred EE--------------EEcCCCeEEEEECCEECCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEEE
Confidence 54 2223333333332110 0112222556778999999999999996543
No 47
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.96 E-value=3.7e-27 Score=228.06 Aligned_cols=367 Identities=14% Similarity=0.202 Sum_probs=211.0
Q ss_pred CceeeeecCCeEEEEEEeccCC--CceEEEEEC--CE---Eee--------------cCCceeEEEe--CCeEEEEEccc
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQ--PMEVSLTKN--GR---VVQ--------------SDDRFKFTVL--DDYIIIFIKEI 58 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~--~~---~~~--------------~~~~~~~~~~--~~~~~l~i~~~ 58 (591)
|..+.+.+|++++|.|.+.+.+ .+.+.|+|+ |. .+. ...|+.+... +...+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (457)
T 1hzh_H 7 SGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL 86 (457)
T ss_dssp CCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC
Confidence 5678999999999999998876 778999984 22 110 1245555443 35579999999
Q ss_pred CCCCceEEEEEEEcCCe------------eeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEE
Q psy12425 59 RKEDAGDYTVNLSNSSG------------SVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVV 126 (591)
Q Consensus 59 ~~~d~g~Y~c~~~n~~g------------~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~ 126 (591)
+.+|+|.|+|.+.|..| .......|.|...+.. .| .+.. . ++.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~--~P-~i~~--------~--~~~------------ 141 (457)
T 1hzh_H 87 RSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTK--GP-SVFP--------L--APS------------ 141 (457)
T ss_dssp CGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCB--CC-EEEE--------E--CCC------------
T ss_pred CcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCC--CC-eEEe--------c--Ccc------------
Confidence 99999999999998865 1223456666542211 11 0000 0 000
Q ss_pred EEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeE
Q psy12425 127 ERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFV 206 (591)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v 206 (591)
..+..+....+.|.+... .|. .+
T Consensus 142 ------------------------~~~~~g~~v~L~C~~~g~--------------------~P~-------------~~ 164 (457)
T 1hzh_H 142 ------------------------SKSTSGGTAALGCLVKDY--------------------FPE-------------PV 164 (457)
T ss_dssp ------------------------SCCCTTCCEEEEEEEESB--------------------BSC-------------CC
T ss_pred ------------------------ccccCCCcEEEEEEEeEE--------------------eCC-------------Ce
Confidence 012355667788877621 000 14
Q ss_pred EEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcC
Q psy12425 207 NLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKD 286 (591)
Q Consensus 207 ~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~ 286 (591)
.++|....... ....+.. .......+. ....|.|.++...| |.|+|.|.|..+... ....+.+..
T Consensus 165 ~v~W~k~~~~~--~~~~~~~--~~~~~~~~~-------~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~---~~~~v~~~~ 229 (457)
T 1hzh_H 165 TVSWNSGALTS--GVHTFPA--VLQSSGLYS-------LSSVVTVPSSSLGT-QTYICNVNHKPSNTK---VDKKAEPKS 229 (457)
T ss_dssp EEEETTTTBCT--TEEEEEE--EECTTSCEE-------EEEEEEECSGGGGT-SCCEEEEEEGGGTEE---EEEECCCCC
T ss_pred EEEEEeCCEec--cceEcCc--eECCCCCEE-------EEEEEEecccccCC-ceEEEEEEeCCCCcc---eeEEecccC
Confidence 57887632111 1111100 001111111 12468899999888 999999999765321 011111110
Q ss_pred ------------CCccCCCeE-Eeeccccc-eeccccEEEEEEEcCCCCC----eeEEecCCccCCCCCceE-EEEeCCe
Q psy12425 287 ------------PMAAKAPEI-IVPLRNAN-AIQNHNAQFQCTITGCPKP----TISWLKGSREITPSARHH-IFAEGDT 347 (591)
Q Consensus 287 ------------~~~~~~p~~-~~~~~~~~-~~~g~~~~l~c~~~~~p~~----~v~W~~~~~~~~~~~~~~-~~~~~~~ 347 (591)
+....+|.+ ..++.... +.+|+.+.|.|.+.|.|.+ .+.|++++..+....... ....++
T Consensus 230 ~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g- 308 (457)
T 1hzh_H 230 CDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNS- 308 (457)
T ss_dssp SCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTS-
T ss_pred CCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCC-
Confidence 001124554 33333332 6789999999999997653 999999998775432211 112222
Q ss_pred EEEEEcc---eeccc---ceEEEEEEEeCCcceeeeeEEE----EecCCcccCCCCcccceeecCCCeEEEEEeeeccCC
Q psy12425 348 YTLIINS---VYGVD---ADEYVCRAVNKGGVKSTKAELI----IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK 417 (591)
Q Consensus 348 ~~l~i~~---~~~~d---~g~y~c~a~n~~g~~~~~~~l~----v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~ 417 (591)
.+.+.. +...| .|.|+|.|.|..+.......+. +..+|.+...+.. ...+..|+ +.|.|.+.|.++
T Consensus 309 -~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~--~~~~~~~~-~~l~C~~~g~~p 384 (457)
T 1hzh_H 309 -TYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPS--RDELTKNQ-VSLTCLVKGFYP 384 (457)
T ss_dssp -CEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCC--GGGGGSSE-EEEEEEEEEEBS
T ss_pred -cEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCC--ccccCCCc-EEEEEEEEeEEC
Confidence 222221 23444 9999999998765543333332 2345554432211 11234455 999999999754
Q ss_pred C--eEEEeeCCeEeeeccceEEEecCC-----eeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 418 P--KITWYRDNEVIESGGHFHVETSER-----HAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 418 ~--~v~W~~~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
+ .|.|+++|..+............+ ...|.|.....+|.|.|+|.|.|.....
T Consensus 385 ~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 444 (457)
T 1hzh_H 385 SDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 444 (457)
T ss_dssp SCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred CCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCCC
Confidence 4 899999999885432222211111 2345566665678999999999986543
No 48
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.96 E-value=6.5e-27 Score=213.91 Aligned_cols=272 Identities=24% Similarity=0.343 Sum_probs=203.2
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecC-CceeEEE-eCCeEEEEEcccCCCCceEEEEEEEcCCeeeEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD-DRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~ 79 (591)
|.++.+.+|+++.|.|.+.|.|.+.+.|+|+|..+... .++++.. .++...|.|.+++.+|+|.|+|.|.|..|..+.
T Consensus 11 p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 90 (305)
T 2nzi_A 11 LRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSG 90 (305)
T ss_dssp CCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred ccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccc
Confidence 67889999999999999999999999999999998754 4555543 455579999999999999999999999999888
Q ss_pred EEEEEEecCCCCCCC-----CcceEEecCceEEEEecCCCCCCCcceeeEEEEEEe--cCCCceEEEEeecCcceEEEcC
Q psy12425 80 TFTINITGLPGPPIG-----PLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRD--ISMPHWICISTTCHDTTFIVQG 152 (591)
Q Consensus 80 ~~~l~v~~~p~~p~~-----~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~--~~~~~~~~~~~~~~~~~~~i~~ 152 (591)
.+.|.|...|..... +..+....+..+.|.|.... .+...+.+.... .................+.+.+
T Consensus 91 ~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g----~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 166 (305)
T 2nzi_A 91 TASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSG----KPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPN 166 (305)
T ss_dssp EEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEE----ESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETT
T ss_pred eEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECC----CCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEec
Confidence 888888765543211 12344456778888886422 111122222211 1111222222233556788988
Q ss_pred -CcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeec
Q psy12425 153 -LTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEV 231 (591)
Q Consensus 153 -l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~ 231 (591)
+...+.|.|+|.|.|..|........ ... .+|.+|..+.+....+..+.|+|..|..+++..+..|.+++...
T Consensus 167 ~~~~~d~G~Y~C~a~N~~G~~~~~~~l---~v~---~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~ 240 (305)
T 2nzi_A 167 GVERKDAGFYVVCAKNRFGIDQKTVEL---DVA---DVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCAT 240 (305)
T ss_dssp CCCSTTCEEEEEEEEETTEEEEEEEEE---EEE---BCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEET
T ss_pred CCccCccEEEEEEEEeCCCceeeEEEE---EEe---cCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecC
Confidence 99999999999999998875443221 111 35667777777778899999999998777777899999999998
Q ss_pred CCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEc
Q psy12425 232 GSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 285 (591)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~ 285 (591)
....|...... ....+.|.+|.+++.|.|+|.|.|..|.+.++..+..++..
T Consensus 241 ~~~~w~~~~~~--~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t~ 292 (305)
T 2nzi_A 241 TAERWLRVGQA--RETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITK 292 (305)
T ss_dssp TSCCEEEEEEE--SSSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEECC
T ss_pred CCCccEECccc--cCceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEcC
Confidence 88899887654 37789999999999999999999999999888766655543
No 49
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.96 E-value=4.5e-25 Score=207.79 Aligned_cols=353 Identities=16% Similarity=0.205 Sum_probs=240.4
Q ss_pred CCCCCCcceEEecCc-eEEEEecCCCCCCCcceeeEEEEEEecCCC--ceEEEEeecCcceEEEcCCcCCcEEEEEEEEE
Q psy12425 90 GPPIGPLDVSEITKH-TCTLHWNPPKYDGGLKVTHYVVERRDISMP--HWICISTTCHDTTFIVQGLTEGQEYLFHVMAV 166 (591)
Q Consensus 90 ~~p~~~~~~~~~~~~-~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~--~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~ 166 (591)
.+|.+ +.+...... ++.|+|.++.. ..+.+|.+.+...... .+...........+.+.+|.+++.|.|+|+|.
T Consensus 4 ~~P~~-l~~~~~~~~~sv~l~W~~~~~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 79 (375)
T 3t1w_A 4 SPPTN-LHLEANPDTGVLTVSWERSTT---PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTV 79 (375)
T ss_dssp CCCEE-EEEEEETTTTEEEEEEECCSC---SSCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEEE
T ss_pred CCCCc-cEEEecCCCeEEEEEEeCCCC---CCeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEEE
Confidence 34444 667777788 99999998762 3688999999886542 23333345577899999999999999999999
Q ss_pred ccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCC
Q psy12425 167 NENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAP 246 (591)
Q Consensus 167 n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 246 (591)
|..|.+..... .. ...+| +|..+.+......++.|+|.++. +..+.+|.|.+...+...+..........
T Consensus 80 ~~~g~s~~~~~---~~---~~~~p-~p~~l~~~~~~~~si~l~W~~~~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~ 149 (375)
T 3t1w_A 80 KDDKESVPISD---TI---IPEVP-QLTDLSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDFVDSSV 149 (375)
T ss_dssp ETTEECCCEEE---EE---CCCCC-CCSCCEEECCCSSEEEEECCCCC---CTTEEEEEEEEEESSSCCSCEEEEECTTC
T ss_pred cCCCCCCcEEe---eE---cCCCC-CCceEEEEecCCCeEEEEEECCC---CCCceEEEEEEEECCCCCceeEEEcCCCc
Confidence 98876655422 11 12234 36778888888999999999863 34799999999877654433333334466
Q ss_pred ceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEE
Q psy12425 247 SQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISW 326 (591)
Q Consensus 247 ~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W 326 (591)
..+.|.+|.++..|.|++.|.|..|.+..+. +.... .+.+|.- |.+...+.....+.|
T Consensus 150 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~----~~~~t--~~~~p~~----------------l~~~~~~~~si~l~W 207 (375)
T 3t1w_A 150 GYYTVTGLEPGIDYDISVITLINGGESAPTT----LTQQT--AVPPPTD----------------LRFTNIGPDTMRVTW 207 (375)
T ss_dssp CEEEEECCCTTCEEEEEEEEEETTEECCCEE----EEEEC--CCCCCEE----------------EEEESCCSSCEEEEE
T ss_pred ceEEEeCCCCCCEEEEEEEEEeCCcccCCee----eeeec--CCCCCce----------------eEEEecccCEEEEEE
Confidence 7899999999999999999999988765432 11111 0112211 112212222335667
Q ss_pred ecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeE
Q psy12425 327 LKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV 406 (591)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~ 406 (591)
...... .-.. |........+.
T Consensus 208 ~~p~~~--~i~~------------------------Y~v~~~~~~~~--------------------------------- 228 (375)
T 3t1w_A 208 APPPSI--DLTN------------------------FLVRYSPVKNE--------------------------------- 228 (375)
T ss_dssp ECCSSC--CCCE------------------------EEEEEEEGGGT---------------------------------
T ss_pred cCCCCC--CccE------------------------EEEEEEeCCCC---------------------------------
Confidence 542100 0001 11111000000
Q ss_pred EEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCC
Q psy12425 407 VVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 486 (591)
Q Consensus 407 ~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~ 486 (591)
..............+.|.+|.+...|.|++.|.|..|.+... .......|.+|.
T Consensus 229 -------------------------~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~-~~~~~t~p~~P~ 282 (375)
T 3t1w_A 229 -------------------------EDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL-RGRQKTGLDSPT 282 (375)
T ss_dssp -------------------------TCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE-EEEEECCCCCCE
T ss_pred -------------------------CCcEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCce-eeEEecCCCCCC
Confidence 000011222345778899999999999999999998876543 445556888999
Q ss_pred CCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCC-CceEE-eceeeeeEEEEcCcccCceEEEEEEEEcCCcCCC
Q psy12425 487 FPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM-SSWIR-VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSD 564 (591)
Q Consensus 487 ~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~-~~~~~-~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~ 564 (591)
++.+..++.+++.|+|++|. ..+.+|.|+++.... ..+.. ........+.|.+|.|++.|.|+|+|.|..|.|+
T Consensus 283 ~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~ 358 (375)
T 3t1w_A 283 GIDFSDITANSFTVHWIAPR----ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESP 358 (375)
T ss_dssp EEEEESCCSSCEEEEEECCS----SCCSEEEEEEEETTCCSSCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred ccEeeeccCCEEEEEECCCC----cceeeEEEEEEECCCCCcceeEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCCC
Confidence 99998889999999999863 478999999988764 33333 3455667999999999999999999999999998
Q ss_pred CCC
Q psy12425 565 PST 567 (591)
Q Consensus 565 ~s~ 567 (591)
+..
T Consensus 359 p~s 361 (375)
T 3t1w_A 359 LLI 361 (375)
T ss_dssp CEE
T ss_pred cee
Confidence 764
No 50
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.95 E-value=3e-27 Score=228.75 Aligned_cols=368 Identities=12% Similarity=0.106 Sum_probs=214.3
Q ss_pred ceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCc--ceEE
Q psy12425 146 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGS--RIQG 223 (591)
Q Consensus 146 ~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~--~~~~ 223 (591)
..+.|.++.. +.+ |+|.|.+..+...... .......+......+. ......|..++|.|.....+... .+.+
T Consensus 50 ~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~--~l~V~~~P~~~~~~~~--~~~v~~G~~v~L~C~~~g~~~~~~~~v~W 123 (450)
T 1z7z_I 50 KVYELSNVQE-DSQ-PMCYSNCPDGQSTAKT--FLTVYWTPERVELAPL--PSWQPVGKNLTLRCQVEGGAPRANLTVVL 123 (450)
T ss_dssp EEEEEEEECS-CBC-CEEEEEETTEEEEEEC--EEEEEBCCSEEEECCC--CSEECTTSEEEEEEEEECCBCGGGEEEEE
T ss_pred eEEEEEeccc-CCe-eEEEEeCCCCcceeEE--EEEEEeCCCcceecCC--CceEeeCCeEEEEEEecCCCCCcCcEEEE
Confidence 3677888877 667 9999975443221111 1111111100000111 12345688999999875433211 1222
Q ss_pred EEEEeeecCCCccEEEE-eeecCCceeeecCcccCCcEEEEEEEEcCCCCCCC-----CCCcceEEEcCCCccCCCeEEe
Q psy12425 224 YWIDKHEVGSDAWQRVN-VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLP-----SSASNSVQIKDPMAAKAPEIIV 297 (591)
Q Consensus 224 y~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~-----s~~~~~~~~~~~~~~~~p~~~~ 297 (591)
| ..+. ...... ........|.|.++..+|.|.|+|.|.|..|.... ......+.+... +..+|.+..
T Consensus 124 ~-----k~g~-~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~-~~~~p~~~~ 196 (450)
T 1z7z_I 124 L-----RGEK-ELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL-PATPPQLVS 196 (450)
T ss_dssp E-----ETTE-EEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCC-CSSCCEEEC
T ss_pred e-----eCCE-EeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeecc-CCCCCEecC
Confidence 2 1111 000000 00112348999999999999999999998774321 011122222221 123444433
Q ss_pred eccccceeccccEEEEEEEcCC-C--CCeeEEecCCccCCCCCceEEEEeCCeEEEE-Ecceecccce--EEEEEEEeCC
Q psy12425 298 PLRNANAIQNHNAQFQCTITGC-P--KPTISWLKGSREITPSARHHIFAEGDTYTLI-INSVYGVDAD--EYVCRAVNKG 371 (591)
Q Consensus 298 ~~~~~~~~~g~~~~l~c~~~~~-p--~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~-i~~~~~~d~g--~y~c~a~n~~ 371 (591)
+ ..+.+|+.+.|.|.+.|. | .+.+.|++++..+.. + +...+....+. ..++..+|+| .|+|.|.|..
T Consensus 197 ~---~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~--~--~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~ 269 (450)
T 1z7z_I 197 P---RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--T--VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGN 269 (450)
T ss_dssp C---SEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC--E--EEEETTEEEEEEEEECCGGGCEEEEEEEEEEETT
T ss_pred c---eeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc--e--EEecCCceeEEEEEEeEhhhCCcEEEEEEEccCC
Confidence 2 568899999999999998 7 789999999988765 2 33333332222 2277899999 9999999999
Q ss_pred cceeeeeEEEEecCC--cccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEe
Q psy12425 372 GVKSTKAELIIMTAP--KFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIR 449 (591)
Q Consensus 372 g~~~~~~~l~v~~~p--~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~ 449 (591)
|.......|.|...| .+.. ....+.+|+.+.|.|.+. |.|.+.| +|..+.. .+....|.|.
T Consensus 270 g~~~~~~~l~V~~~~~p~i~~-----~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~--------~~~~~~L~i~ 332 (450)
T 1z7z_I 270 QSQETLQTVTIYSFPAPNVIL-----TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP--------LGPRAQLLLK 332 (450)
T ss_dssp EEEEEEEEEEEECCCCCEEEE-----SCSEEETTCEEEEEEEC----------------------------CCCCCEEEE
T ss_pred ccEEEEEEEEEecCCCCeEec-----CCeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCC--------CCceEEEEEe
Confidence 998888889888743 3322 233678999999999998 9999999 6665521 2234589999
Q ss_pred ccCCCcceeEEEEEEcCCC-c---cceEEEEEecCCCCCCCCC---eeeeecCCeeEEEeeccccCCCcceeeEEEEeee
Q psy12425 450 DASNVDTAPYRVVAENDLG-M---DSAIVKIQISDRPDPPQFP---TVEDIGHDSLALVWRAPIWDGGSNITNYIVEKRE 522 (591)
Q Consensus 450 ~~~~~~~g~y~c~a~n~~g-~---~~~~~~~~v~~~p~~p~~~---~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~ 522 (591)
.+..+|+|.|+|.|.|..| . .+..+.|.|..+|...... .+....+..+.|.|.... .+.-. +.|..
T Consensus 333 ~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g----~P~p~--i~W~~ 406 (450)
T 1z7z_I 333 ATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWG----NPLPE--LKCLK 406 (450)
T ss_dssp CCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEE----ESCCE--EEEEE
T ss_pred cCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEeccc----CCCCc--EEEEE
Confidence 9999999999999997665 3 3466777887766433222 233345677888887522 12112 22222
Q ss_pred CCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCC
Q psy12425 523 HPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSD 564 (591)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~ 564 (591)
.+. .....+ ..+ .+...+.+.|+|.|.|.+|...
T Consensus 407 ~g~---~~~~~g--~~~---~v~~~d~G~Y~C~a~N~~G~~~ 440 (450)
T 1z7z_I 407 DGT---FPLPIG--ESV---TVTRDLEGTYLCRARSTQGEVT 440 (450)
T ss_dssp TTT---EECCTT--SCE---ECCGGGCEEEEEEEEETTEEEE
T ss_pred CCc---ccCCCC--CeE---eEehhhCeEEEEEEEeCCCcee
Confidence 221 011111 122 4778999999999999999654
No 51
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.95 E-value=3.9e-28 Score=223.04 Aligned_cols=172 Identities=19% Similarity=0.302 Sum_probs=129.6
Q ss_pred eeccccEEEEEEE------cCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEE-eCCcce--
Q psy12425 304 AIQNHNAQFQCTI------TGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV-NKGGVK-- 374 (591)
Q Consensus 304 ~~~g~~~~l~c~~------~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~-n~~g~~-- 374 (591)
+..|+.+.|.|.+ .|.|.+.+.|++++..+...........+ .|.|.++..+|+|.|+|.|. |..|..
T Consensus 115 ~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~ 191 (315)
T 1itb_B 115 LPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYLGKQYP 191 (315)
T ss_dssp EETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETT---EEEESSCCGGGCEEEEEEEEEEETTEEEE
T ss_pred EecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCc---eEEEEeceehhCcEEEEEEEcCCCCcEEE
Confidence 4556777788877 78888999999999888654433332333 79999999999999999999 787876
Q ss_pred -eeeeEEEEe-----cCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceE-----EEec---
Q psy12425 375 -STKAELIIM-----TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFH-----VETS--- 440 (591)
Q Consensus 375 -~~~~~l~v~-----~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~-----~~~~--- 440 (591)
.....+.+. .+|.+..++. ....+..|+.+.|.|.+.|.|.|.+.|+++|..+....... ....
T Consensus 192 ~~~~~~~~~~~~~~~~~P~~~~~~~--~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~ 269 (315)
T 1itb_B 192 ITRVIEFITLEENKPTRPVIVSPAN--ETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPAN 269 (315)
T ss_dssp EEEEEEEEEECCCCCCCCEECSCCS--EEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSC
T ss_pred EEEEEEEEEecCCCCCCCEEecCCC--CcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCC
Confidence 333444443 4455543332 23467899999999999999999999999999887543211 1111
Q ss_pred ----CCeeEEEEeccCCCc-ceeEEEEEEcCCCccceEEEEEecC
Q psy12425 441 ----ERHAILTIRDASNVD-TAPYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 441 ----~~~~~l~i~~~~~~~-~g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
.....|.|.++..+| +|.|+|.|.|..|.....+.|.+..
T Consensus 270 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 270 KRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp GGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred CceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 124589999999999 9999999999999999998888753
No 52
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.95 E-value=5e-27 Score=223.35 Aligned_cols=348 Identities=14% Similarity=0.142 Sum_probs=220.1
Q ss_pred eEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCC
Q psy12425 197 VVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 276 (591)
Q Consensus 197 ~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s 276 (591)
.+....|..++|.|..........+.+| ..........- .. ........|.|.++...|.|.|+|.|.|..|.....
T Consensus 15 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~-k~g~~~~~~~~-~~-~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~ 91 (395)
T 1bih_A 15 EVLFRENNPTVLECIIEGNDQGVKYSWK-KDGKSYNWQEH-NA-ALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSR 91 (395)
T ss_dssp EEEEETTSCEEECCCEESCCSSCEEEEE-ESSSBCCTTTT-TE-EECTTSCCEEESSCCGGGCEEEEEEEEETTEEEECC
T ss_pred ceEEeCCCEEEEEEEEecCCCCceEEEE-ECCcCcccccc-eE-EEecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeE
Confidence 3455678889999987541111122222 11111111110 01 112345689999999999999999999987754322
Q ss_pred CCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEE-cCCCCCeeEEecCCc---cCCC----CCceEEEEeCCeE
Q psy12425 277 SASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI-TGCPKPTISWLKGSR---EITP----SARHHIFAEGDTY 348 (591)
Q Consensus 277 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~v~W~~~~~---~~~~----~~~~~~~~~~~~~ 348 (591)
...+.+... ..|.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|++++. .... ..++.+..++
T Consensus 92 ~~~l~v~~~-----~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~--- 161 (395)
T 1bih_A 92 VISFRKTYL-----IASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDG--- 161 (395)
T ss_dssp CEEEEEEEE-----ECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTS---
T ss_pred EEEEEEEEe-----ecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCC---
Confidence 222222221 12222 2235667899999999996 788999999999762 1111 2344443333
Q ss_pred EEEEcceecccce---EEEEEEEeCCcceeeeeEEEEec---CCcc----cCCCC-cccceeecCCCeEEEEEeeeccCC
Q psy12425 349 TLIINSVYGVDAD---EYVCRAVNKGGVKSTKAELIIMT---APKF----NVPPR-FRDTAYFDKGENVVVKIPFTGYPK 417 (591)
Q Consensus 349 ~l~i~~~~~~d~g---~y~c~a~n~~g~~~~~~~l~v~~---~p~~----~~~~~-~~~~~~~~~g~~~~l~c~~~~~p~ 417 (591)
+|.|.++..+|.| .|+|.|.|..|............ .+.. ...|. ......+..|+.+.|.|.+.|.|.
T Consensus 162 ~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~ 241 (395)
T 1bih_A 162 NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPM 241 (395)
T ss_dssp CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEECSSC
T ss_pred cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEeccCCC
Confidence 6999999999999 99999999988765443322211 1100 00111 123456789999999999999999
Q ss_pred CeEEEeeCCeEeeeccceEEEe--cCCeeEEEEeccCCCcceeEEEEEEcCCCccce-EEEEEecCCCC---CCCCCeee
Q psy12425 418 PKITWYRDNEVIESGGHFHVET--SERHAILTIRDASNVDTAPYRVVAENDLGMDSA-IVKIQISDRPD---PPQFPTVE 491 (591)
Q Consensus 418 ~~v~W~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~-~~~~~v~~~p~---~p~~~~~~ 491 (591)
+.+.|+++|..+.......+.. ......|.|.++..+|.|.|+|.|.|..|.... .+.|.|..+|. .|.. .+.
T Consensus 242 ~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~-~~~ 320 (395)
T 1bih_A 242 GYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEK-VIV 320 (395)
T ss_dssp CCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCS-EEE
T ss_pred CeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCc-ceE
Confidence 9999999998886543333322 223458999999999999999999999998755 88888887663 2222 123
Q ss_pred eecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCC
Q psy12425 492 DIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSD 564 (591)
Q Consensus 492 ~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~ 564 (591)
...+..+.|.|........ .+.+|+- ........... ....|.|.++...+.+.|+|.|.|.+|...
T Consensus 321 ~~~g~~~~l~C~~~g~p~p-~v~W~~~-g~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 387 (395)
T 1bih_A 321 VKQGQDVTIPCKVTGLPAP-NVVWSHN-AKPLSGGRATV----TDSGLVIKGVKNGDKGYYGCRATNEHGDKY 387 (395)
T ss_dssp ECTTSCEEEECEEEEESCC-CCEEEET-TEECCSSSEEE----ETTEEEESSCCSTTCEEEEEEEEETTEEEE
T ss_pred ecCCCeEEEEEEECcccCC-eeEEEEC-CEECCCCceEE----ECCEEEEeeCCcccCEEEEEEEEccCCCce
Confidence 3345678888875321111 1222211 11111111111 123899999999999999999999999643
No 53
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.95 E-value=7.5e-25 Score=205.81 Aligned_cols=352 Identities=19% Similarity=0.259 Sum_probs=236.8
Q ss_pred CCCCCCCcceEEecCc-eEEEEecCCCCCCCcceeeEEEEEEecCCCc---eEEEEeecCcceEEEcCCcCCcEEEEEEE
Q psy12425 89 PGPPIGPLDVSEITKH-TCTLHWNPPKYDGGLKVTHYVVERRDISMPH---WICISTTCHDTTFIVQGLTEGQEYLFHVM 164 (591)
Q Consensus 89 p~~p~~~~~~~~~~~~-~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~---~~~~~~~~~~~~~~i~~l~~~~~y~~~~~ 164 (591)
|.+|.. +.+...... ++.|+|.++. +..+..|.|++....... |... .......+.+.+|.+++.|.|+|.
T Consensus 2 p~~P~~-l~~~~~~~~~sv~l~W~~~~---~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~ 76 (368)
T 1fnf_A 2 LSPPTN-LHLEANPDTGVLTVSWERST---TPDITGYRITTTPTNGQQGNSLEEV-VHADQSSCTFDNLSPGLEYNVSVY 76 (368)
T ss_dssp CCCCEE-EEEEECSSSSCEEEEEECCS---CSSCCEEEEEEEETTTCSSCCEEEE-ECTTCCEEECCCCCTTSCEEEEEE
T ss_pred CCCCcc-eEEEecCCCcEEEEEEeCCC---CCCceEEEEEEEECCCCCCceeEEE-ecCCcCEEEECCCCCCCEEEEEEE
Confidence 455554 556665555 5999999876 346889999998866533 3332 345678899999999999999999
Q ss_pred EEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCC-ccEEEEeee
Q psy12425 165 AVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD-AWQRVNVAI 243 (591)
Q Consensus 165 a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~-~~~~~~~~~ 243 (591)
|.|..|.+..... ... . .+.+|..+.+......++.|+|.++. +..+.+|.+.++..... .|..... .
T Consensus 77 a~~~~g~s~~~~~---~~~---~-~~~~p~~l~~~~~~~~si~l~W~~p~---~~~~~~Y~v~~~~~~~~~~~~~~~~-~ 145 (368)
T 1fnf_A 77 TVKDDKESVPISD---TII---P-AVPPPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSI-S 145 (368)
T ss_dssp EEETTEECCCEEE---EEC---C-CCCCCEEEEEESCCSSCEEEEEECCT---TCCCSEEEEEEEETTCTTCCEEEEE-C
T ss_pred EEcCCCccCceee---eec---C-CCcCCceeEEEEcCCCeEEEEeeCCC---CCCCcEEEEEEEECCCCCccEEEEc-C
Confidence 9999887655321 111 1 22356667777778899999999873 24688999999876543 4555443 3
Q ss_pred cCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCe
Q psy12425 244 CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT 323 (591)
Q Consensus 244 ~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~ 323 (591)
.....+.+.+|.++..|.|++.|.|..|.+... ...... .+.+|. .|.+.........
T Consensus 146 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~----~~~~~~--~~~~P~----------------~l~~~~~~~~sv~ 203 (368)
T 1fnf_A 146 PSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL----RGRQKT--GLDSPT----------------GIDFSDITANSFT 203 (368)
T ss_dssp TTCCEEEECSCCTTCEEEEEEEEEETTEECCCE----EEEEEC--CCCCCE----------------EEEEESCCSSEEE
T ss_pred CCcceEEecCCCCCCEEEEEEEEEeCCCCCCCe----EeeecC--CCCCCC----------------ccEEEEccCCEEE
Confidence 356789999999999999999999988865421 111111 112222 1122222222335
Q ss_pred eEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCC
Q psy12425 324 ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKG 403 (591)
Q Consensus 324 v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g 403 (591)
+.|......+ .. |........+. +
T Consensus 204 l~W~~p~~~i---~~------------------------Y~v~~~~~~~~-----------------------------~ 227 (368)
T 1fnf_A 204 VHWIAPRATI---TG------------------------YRIRHHPEHFS-----------------------------G 227 (368)
T ss_dssp EEEECCSSCC---SE------------------------EEEEEECSCCS-----------------------------S
T ss_pred EEEeCCCCCc---CE------------------------EEEEEecCCCC-----------------------------C
Confidence 6665421110 01 11111000000 0
Q ss_pred CeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCC
Q psy12425 404 ENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPD 483 (591)
Q Consensus 404 ~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~ 483 (591)
.............+.|.+|.+...|.|++.|.|..|.+.... .....+|.
T Consensus 228 -----------------------------~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~-~~~~t~p~ 277 (368)
T 1fnf_A 228 -----------------------------RPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI-GQQSTVSD 277 (368)
T ss_dssp -----------------------------CCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEE-EEEECCCC
T ss_pred -----------------------------CccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCccc-ccccCCCC
Confidence 000111223456788899999999999999999998765543 45667889
Q ss_pred CCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCc-eE-EeceeeeeEEEEcCcccCceEEEEEEEEcCCc
Q psy12425 484 PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSS-WI-RVGNTRFTTMAITGLSPGHQYEFRVYAENVYG 561 (591)
Q Consensus 484 ~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~-~~-~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G 561 (591)
+|..+.+...+.+++.|+|++|.. .+.+|.|+++...+.. +. .........+.+.+|.+++.|.|+|+|.|..|
T Consensus 278 ~P~~l~~~~~~~~sv~l~W~~p~~----~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G 353 (368)
T 1fnf_A 278 VPRDLEVVAATPTSLLISWDAPAV----TVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRG 353 (368)
T ss_dssp SCEEEEEEEEETTEEEEEEECCSS----CCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEECCCS
T ss_pred CCCeeEEEecCCCEEEEEeeCCCC----ccceEEEEEEECCCCCccEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCC
Confidence 999999988899999999998742 5889999998765432 22 22344567999999999999999999999999
Q ss_pred CCCCCCC
Q psy12425 562 RSDPSTT 568 (591)
Q Consensus 562 ~~~~s~~ 568 (591)
.|+.|..
T Consensus 354 ~g~~s~~ 360 (368)
T 1fnf_A 354 DSPASSK 360 (368)
T ss_dssp SSCCBCC
T ss_pred cCcccCc
Confidence 9988764
No 54
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.95 E-value=2.6e-27 Score=223.33 Aligned_cols=296 Identities=20% Similarity=0.200 Sum_probs=194.6
Q ss_pred ceeeecCc-ccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEc-CCCCCee
Q psy12425 247 SQINIPNL-IEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTI 324 (591)
Q Consensus 247 ~~~~i~~l-~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~-~~p~~~v 324 (591)
..+.|.+. ...|.|.|+|.|.|..|........+.+... ++..........+.+|+.+.|.|... +.|.+.+
T Consensus 62 g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~------~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~ 135 (384)
T 3kld_A 62 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYL------ENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSY 135 (384)
T ss_dssp TEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEE------CCCSCCCCCCEEEEETCCEEECCCCCSEESCEEE
T ss_pred CEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEecc------cccccCCCCceeEEcCCCeEEecCCCCCCCCeEE
Confidence 45666665 7889999999999998864322222222221 11111122345678999999999764 4567899
Q ss_pred EEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceee---eeEEEEe-------cCCcccCCCCc
Q psy12425 325 SWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST---KAELIIM-------TAPKFNVPPRF 394 (591)
Q Consensus 325 ~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~---~~~l~v~-------~~p~~~~~~~~ 394 (591)
.|++++..+....+..+... ...|.|.++..+|+|.|+|.|.|..|.... ...+.+. ..|.+... .
T Consensus 136 ~W~~~~~~~~~~~~~~~~~~--~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~--~ 211 (384)
T 3kld_A 136 AWIFNEYPSYQDNRRFVSQE--TGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQ--F 211 (384)
T ss_dssp EEEETTEECCCSSSEEECTT--TCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEE--C
T ss_pred EEEECCCCCEeeccEEEEcC--CCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeec--C
Confidence 99999887654444333222 226999999999999999999998876432 1222222 12222211 1
Q ss_pred ccceeecCCCeEEEEEeeeccCCCeEEEeeCC-eEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceE
Q psy12425 395 RDTAYFDKGENVVVKIPFTGYPKPKITWYRDN-EVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAI 473 (591)
Q Consensus 395 ~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~ 473 (591)
.....+..|+.+.|.|.+.|.|.|.+.|++++ ..+.... . .......|.|.++..+|+|.|+|.|.|..|.....
T Consensus 212 ~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 287 (384)
T 3kld_A 212 PETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKA--R--RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAK 287 (384)
T ss_dssp CSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTC--E--ECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccc--e--ecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEE
Confidence 23455788999999999999999999999954 3443221 1 12345689999999999999999999999999888
Q ss_pred EEEEecCCCC---CCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEee--eC-CCCceEEeceeeeeEEEEcCcccC
Q psy12425 474 VKIQISDRPD---PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKR--EH-PMSSWIRVGNTRFTTMAITGLSPG 547 (591)
Q Consensus 474 ~~~~v~~~p~---~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~--~~-~~~~~~~~~~~~~~~~~i~~l~~~ 547 (591)
..+.+..+|. .+.. .....+..+.|.|..... +...+.+... .. ...... .....+.|.++...
T Consensus 288 ~~l~v~~~P~~~~~~~~--~~v~~g~~v~l~C~~~g~----P~p~i~W~k~g~~l~~~~~~~----~~~~~L~i~~v~~~ 357 (384)
T 3kld_A 288 GQLTFYAQPNWVQIIND--IHVAMEESVFWECKANGR----PKPTYRWLKNGDPLLTRDRIQ----IEQGTLNITIVNLS 357 (384)
T ss_dssp EEEEEEEEEEEEECCCC--EEECTTCCEEEECEEEEE----SCCEEEEEETTEECCCBTTEE----EETTEEEESSCCGG
T ss_pred EEEEEecCCccccCCCc--eEecCCCCEEEEeECCcc----CCCeEEEEECCEECCCCccEE----EeCCEEEEeecChh
Confidence 8888887663 2222 222345678888875321 2112222111 10 011111 12247999999999
Q ss_pred ceEEEEEEEEcCCcCCCCC
Q psy12425 548 HQYEFRVYAENVYGRSDPS 566 (591)
Q Consensus 548 ~~Y~~~v~A~n~~G~~~~s 566 (591)
+.+.|+|.|.|.+|....+
T Consensus 358 D~G~Y~C~A~N~~G~~~~~ 376 (384)
T 3kld_A 358 DAGMYQCVAENKHGVIFSS 376 (384)
T ss_dssp GCEEEEEEEEETTEEEEEE
T ss_pred hCEEEEEEEEeCCceEEec
Confidence 9999999999999965443
No 55
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.95 E-value=1.6e-26 Score=210.97 Aligned_cols=276 Identities=14% Similarity=0.059 Sum_probs=198.5
Q ss_pred CceeeeecCCeEEEEEEeccC-----CCceEEEEECCEEeecCCceeEEEeCC-eEEEEEcccCCCCceEEEEEEEcCCe
Q psy12425 2 PNALYIPEGDNTKVKIFYAGD-----QPMEVSLTKNGRVVQSDDRFKFTVLDD-YIIIFIKEIRKEDAGDYTVNLSNSSG 75 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~-----p~~~v~W~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~Y~c~~~n~~g 75 (591)
|.+..|..|++++|.|.+.++ |.+.+.|++||..+..+ +......+. ...|+|.+++..|+|.|.|.+.+..+
T Consensus 7 p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~ 85 (313)
T 2d9q_B 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSL 85 (313)
T ss_dssp ESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSE
T ss_pred CCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEEEecCeEEEEEEEeccCCCccceEEeeecCCCc
Confidence 678889999999999999987 67899999999988533 222112222 26899999999999999999977666
Q ss_pred eeEEEEEEEEecCCCCCCCCcceEEe-cCceEEEEecCCCCCCCcceeeEEEEEEecCC------CceEEEEeecCcceE
Q psy12425 76 SVSGTFTINITGLPGPPIGPLDVSEI-TKHTCTLHWNPPKYDGGLKVTHYVVERRDISM------PHWICISTTCHDTTF 148 (591)
Q Consensus 76 ~~~~~~~l~v~~~p~~p~~~~~~~~~-~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~------~~~~~~~~~~~~~~~ 148 (591)
.....+.|.|..+|.+|.. +..... ...+++++|.++.. ++. ...|.+.++.... ..|..+........+
T Consensus 86 ~~~~~~~l~v~~~P~~P~~-l~c~~~~~~~~~~~~W~~~~~-~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (313)
T 2d9q_B 86 QILDQVELRAGYPPAIPHN-LSCLMNLTTSSLICQWEPGPE-THL-PTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHC 162 (313)
T ss_dssp EEEEEEEEEECCCCCCCEE-EEEEEETTTTEEEEEEECCSC-CSS-CCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEE
T ss_pred eeEEEEEEccCCCCCCCcc-ceeeECCCCccEEEEecCCCC-CCC-ceeEEEEEEecCCCcccCCcccccCCCCCCCcEE
Confidence 5566788888888888776 444544 35799999998774 333 3469998876542 235544332233445
Q ss_pred EE--cCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEee------cCCeEEEEEecCCCCCCcc
Q psy12425 149 IV--QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQV------GGDFVNLSWDKPLDDGGSR 220 (591)
Q Consensus 149 ~i--~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~------~~~~v~l~w~~~~~~~~~~ 220 (591)
.+ .+|.++..|.|+|.|.|..|.+..... . ........|.+|..+.+... ....+.|+|.+|... +..
T Consensus 163 ~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~-~--~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~-~~~ 238 (313)
T 2d9q_B 163 SIPRKHLLLYQNMGIWVQAENALGTSMSPQL-C--LDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPG-LHI 238 (313)
T ss_dssp EEEGGGCCSSSCEEEEEEEEETTEEEECCCE-E--ECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGGG-TTS
T ss_pred EECccccccceeEEEEEEEECCCCCccCccE-E--EehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCCC-Cce
Confidence 55 459999999999999999997533221 1 11111234666665555543 357899999997532 334
Q ss_pred eEEEEEEee-ecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEc
Q psy12425 221 IQGYWIDKH-EVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 285 (591)
Q Consensus 221 ~~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~ 285 (591)
..+|.|+|+ ..+...|..+.........+.|.+|.++..|.++++|.|..|.+.++..+..+.+.
T Consensus 239 ~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~ 304 (313)
T 2d9q_B 239 NQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELR 304 (313)
T ss_dssp CEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEEC
T ss_pred eEEEEEEEccCCCCCCcEEcccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCcccee
Confidence 679999999 67777898775544455789999999999999999999998888777666655554
No 56
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.95 E-value=3.6e-27 Score=219.97 Aligned_cols=170 Identities=18% Similarity=0.294 Sum_probs=95.5
Q ss_pred ccccEEEEEEE-----cCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCC-cce---ee
Q psy12425 306 QNHNAQFQCTI-----TGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKG-GVK---ST 376 (591)
Q Consensus 306 ~g~~~~l~c~~-----~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~-g~~---~~ 376 (591)
+|+.+.|.|.+ .+.|.+.+.|++++..+.... .+..++ ..|.|.++..+|+|.|+|.|.|.. |.. ..
T Consensus 134 ~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~--~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~ 209 (349)
T 4dep_C 134 EYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFN--NVIPEG--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTR 209 (349)
T ss_dssp TCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCS--SEEEET--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcc--ceeecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEE
Confidence 34445555553 556778999999998886543 333344 279999999999999999999987 543 45
Q ss_pred eeEEEEecC------CcccCCCCcccceeecCCCeEEEEEeee----ccCCCeEEEeeCCeEeee-ccceEEEe------
Q psy12425 377 KAELIIMTA------PKFNVPPRFRDTAYFDKGENVVVKIPFT----GYPKPKITWYRDNEVIES-GGHFHVET------ 439 (591)
Q Consensus 377 ~~~l~v~~~------p~~~~~~~~~~~~~~~~g~~~~l~c~~~----~~p~~~v~W~~~~~~~~~-~~~~~~~~------ 439 (591)
...|.|..+ |.+..++. .....+..|+.+.|.|.+. +.|.|.+.|+++|..+.. ..++.+..
T Consensus 210 ~~~l~v~~~~~~~~~p~i~~~~~-~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~ 288 (349)
T 4dep_C 210 TLTVKVVGSPKNAVPPVIHSPND-HVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSR 288 (349)
T ss_dssp EEEEEEECCGGGCCSCEEC-----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCT
T ss_pred EEEEEEEccCCCCCCCeEecCCC-ceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeec
Confidence 566777663 44333221 1112567899999999999 578999999999988765 22222211
Q ss_pred cC---CeeEEEEeccCCCcc-eeEEEEEEcCCCccceEEEEEecC
Q psy12425 440 SE---RHAILTIRDASNVDT-APYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 440 ~~---~~~~l~i~~~~~~~~-g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
.+ ....|.|.++..+|. |.|+|.|.|..|.....+.|.+..
T Consensus 289 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 289 TEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp TCCEEEEECC-------------CEEEEECSSCEEEEECC-----
T ss_pred CCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 01 144599999999999 999999999999998888888854
No 57
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.95 E-value=3.1e-27 Score=225.67 Aligned_cols=299 Identities=19% Similarity=0.228 Sum_probs=204.5
Q ss_pred Cceeeec----CcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeE-EeeccccceeccccEEEEEEE-cCC
Q psy12425 246 PSQINIP----NLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI-IVPLRNANAIQNHNAQFQCTI-TGC 319 (591)
Q Consensus 246 ~~~~~i~----~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~g~~~~l~c~~-~~~ 319 (591)
...+.|. ++...|.|.|+|.|.|..|... +....+.+.. +|.+ ........+.+|+.+.|.|.+ .+.
T Consensus 72 ~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~--s~~~~l~V~~-----~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~ 144 (404)
T 3p3y_A 72 SGTLVIDFRSGGRPEEYEGEYQCFARNKFGTAL--SNRIRLQVSK-----SPLWPKENLDPVVVQEGAPLTLQCNPPPGL 144 (404)
T ss_dssp SCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEE--EEEEEEEECC-----CCCCCCCCCCCEEEETTSCEEECCCCCCCS
T ss_pred CceEEEEeccCCCCccCCEEEEEEEEcCCCeEe--eeeEEEEEec-----cCccccCCCCCeEEccCCcEEEEeCCCCCC
Confidence 3445553 7888999999999999877532 1234444442 2222 223344678899999999999 889
Q ss_pred CCCeeEEecCCccCC-CCCceEEEEeCCeEEEEEcceeccc-ceEEEEEEEeCCcce---eeeeEEEEecCCc-------
Q psy12425 320 PKPTISWLKGSREIT-PSARHHIFAEGDTYTLIINSVYGVD-ADEYVCRAVNKGGVK---STKAELIIMTAPK------- 387 (591)
Q Consensus 320 p~~~v~W~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d-~g~y~c~a~n~~g~~---~~~~~l~v~~~p~------- 387 (591)
|.+.+.|++++.... ...++....++ .|.|.++...| .|.|+|.|.|..|.. .....+.+...+.
T Consensus 145 p~~~v~W~~~~~~~~~~~~~~~~~~~~---~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~ 221 (404)
T 3p3y_A 145 PSPVIFWMSSSMEPITQDKRVSQGHNG---DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPS 221 (404)
T ss_dssp SCCEEEEECTTSCBCCCCSSEEECTTS---CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCC
T ss_pred CCCeEEEeCCCccccCCCCcEEEcCCC---cEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCc
Confidence 999999999875443 33344443333 69999999999 599999999988764 2335566654332
Q ss_pred ccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCC
Q psy12425 388 FNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDL 467 (591)
Q Consensus 388 ~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~ 467 (591)
+..++.......+..|+.+.|.|.+.|.|.+.+.|++++..+..... .. ......|.|.++..+|+|.|+|.|.|..
T Consensus 222 ~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 298 (404)
T 3p3y_A 222 FMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKA-KF--ENFNKALRITNVSEEDSGEYFCLASNKM 298 (404)
T ss_dssp BSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTE-EE--EGGGTEEEESSCCGGGCEEEEEEEECSS
T ss_pred cccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcc-cc--cccCceEEEccCCHhHCEEEEEEEEeCC
Confidence 22222222345578999999999999999999999999988765433 22 2235689999999999999999999999
Q ss_pred CccceEEEEEecCCCC---CCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCC----CceEEeceeeeeEEE
Q psy12425 468 GMDSAIVKIQISDRPD---PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM----SSWIRVGNTRFTTMA 540 (591)
Q Consensus 468 g~~~~~~~~~v~~~p~---~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~~~~~ 540 (591)
|..+..+.|.+..+|. .|.... ...+..+.|.|..... +...+.+ ...+. .............+.
T Consensus 299 g~~~~~~~l~V~~~p~~~~~~~~~~--v~~g~~~~l~C~~~g~----p~p~v~W--~~~g~~~~~~~~~~~~~~~~~~L~ 370 (404)
T 3p3y_A 299 GSIRHTISVRVKAAPYWLDEPKNLI--LAPGEDGRLVCRANGN----PKPTVQW--MVNGEPLQSAPPNPNREVAGDTII 370 (404)
T ss_dssp CEEEEEEEEEEEEEEEEEECCCCEE--ECTTCCEEEECEEEEE----SCCEEEE--EETTEEGGGSCCCTTEEEETTEEE
T ss_pred CcEEEEEEEEEeCCCeeeccCCcce--eecCCcEEEEEEcccc----CCCceEE--EECCEecCCCCCCceEEecCCEEE
Confidence 9999999999987663 233222 2345678888875321 1112222 21111 000000011234799
Q ss_pred EcCcccCceEEEEEEEEcCCcCCCC
Q psy12425 541 ITGLSPGHQYEFRVYAENVYGRSDP 565 (591)
Q Consensus 541 i~~l~~~~~Y~~~v~A~n~~G~~~~ 565 (591)
|.++...+.+.|+|.|.|..|....
T Consensus 371 i~~v~~~d~G~Y~C~a~N~~G~~~~ 395 (404)
T 3p3y_A 371 FRDTQISSRAVYQCNTSNEHGYLLA 395 (404)
T ss_dssp ESSCCSSCCCEEEEEEEETTEEEEE
T ss_pred EeecCHHHCEEEEEEEEeCCCcEEE
Confidence 9999999999999999999997543
No 58
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.95 E-value=5e-27 Score=222.70 Aligned_cols=293 Identities=17% Similarity=0.249 Sum_probs=201.5
Q ss_pred CCceeeecCcccCC------cEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcC
Q psy12425 245 APSQINIPNLIEGR------QYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITG 318 (591)
Q Consensus 245 ~~~~~~i~~l~~~~------~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~ 318 (591)
....|.|.++...| .|.|+|.|.|..|... +....+.+. .+|.+...+....+.+|+.+.|.|.+.+
T Consensus 57 ~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~--s~~~~v~v~-----~~p~~~~~~~~~~v~~G~~v~l~C~~~~ 129 (388)
T 2v5m_A 57 SDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSII--SRDVHVRAV-----VAQYYEADVNKEHVIRGNSAVIKCLIPS 129 (388)
T ss_dssp STTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEE--CCCEEEEEE-----CCCCCCCBCCCEEEETTSCEEECCBCCT
T ss_pred CCceEEecccChhhccccccCceEEEEEEccCCeEE--ecceEEEEc-----cccccccCccceeeecCCcEEEEEECcC
Confidence 45689999999887 9999999999887532 223444443 3444445556677899999999999988
Q ss_pred CCC---CeeEEecCCccCCC-----CCceEEEEeCCeEEEEEcceecccc-eEEEEEEEeCCccee-e---eeEEEEecC
Q psy12425 319 CPK---PTISWLKGSREITP-----SARHHIFAEGDTYTLIINSVYGVDA-DEYVCRAVNKGGVKS-T---KAELIIMTA 385 (591)
Q Consensus 319 ~p~---~~v~W~~~~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~-g~y~c~a~n~~g~~~-~---~~~l~v~~~ 385 (591)
.+. +.+.|++++..+.. ..++.+..++ +|.|.+++.+|. |.|+|.|.|..+... . ...+.|..+
T Consensus 130 ~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~ 206 (388)
T 2v5m_A 130 FVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSG---ELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEP 206 (388)
T ss_dssp TTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTS---CEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECC
T ss_pred CCCCCcceEEEEeCCCcccccccCCCCcEEEccCC---cEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecC
Confidence 653 78999998776532 2344443333 699999999999 999999999865432 2 235666654
Q ss_pred Cccc---CCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEee------eccceEEEecCCeeEEEEeccCCCcc
Q psy12425 386 PKFN---VPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIE------SGGHFHVETSERHAILTIRDASNVDT 456 (591)
Q Consensus 386 p~~~---~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~------~~~~~~~~~~~~~~~l~i~~~~~~~~ 456 (591)
.... .+........+..|+.+.|.|.+.|.|.+.+.|++++..+. ...++.. ....|.|.++..+|.
T Consensus 207 ~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~ 282 (388)
T 2v5m_A 207 ISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ----VSGTLIIKDAVVEDS 282 (388)
T ss_dssp CSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEE----ETTEEEESSCCGGGC
T ss_pred CcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceec----ccCEEEECcCCHHHC
Confidence 2211 11111233456789999999999999999999999754321 1122221 245899999999999
Q ss_pred eeEEEEEEcCCCccceEEEEEecCCCCCCCCC-eeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEec---
Q psy12425 457 APYRVVAENDLGMDSAIVKIQISDRPDPPQFP-TVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG--- 532 (591)
Q Consensus 457 g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~-~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~--- 532 (591)
|.|+|.|.|..|..+..+.|.|..+|.....+ ......+..+.|.|.... .+.....|.+.+
T Consensus 283 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g--------------~p~p~i~W~~~g~~i 348 (388)
T 2v5m_A 283 GKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTG--------------NPIKTVSWMKDGKAI 348 (388)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEE--------------ECCCEEEEEETTEEC
T ss_pred eEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEecc--------------ccCCeEEEEECCEEC
Confidence 99999999999999888889888765321111 122234566777776421 111122222211
Q ss_pred eeeeeEEEEcCcccCceEEEEEEEEcCCcCCCC
Q psy12425 533 NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDP 565 (591)
Q Consensus 533 ~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~ 565 (591)
......|.|.++...+.+.|+|.|.|.+|....
T Consensus 349 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 381 (388)
T 2v5m_A 349 GHSESVLRIESVKKEDKGMYQCFVRNDRESAEA 381 (388)
T ss_dssp SCCSSEEEESSCCGGGCEEEEEEEECSSCEEEE
T ss_pred ccCCCEEEEecCChhhCEEEEEEEEcCCCcEEE
Confidence 123458999999999999999999999996543
No 59
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.95 E-value=4.3e-26 Score=207.02 Aligned_cols=273 Identities=21% Similarity=0.260 Sum_probs=184.2
Q ss_pred CceeeeecCCeEEEEEEeccCC-CceEEEEE-CCEEeecC-CceeEEE-eCCeEEEEEcccCCCCceEEEEEEEcCCeee
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQ-PMEVSLTK-NGRVVQSD-DRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 77 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p-~~~v~W~~-~~~~~~~~-~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~ 77 (591)
|.++.|.+|+++.|.|.+.+.| .+.+.|+| +|..+... .++.+.. .+...+|.|.+++.+|+|.|+|.+.|..|..
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~ 88 (291)
T 1qz1_A 9 PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQ 88 (291)
T ss_dssp SSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCE
T ss_pred CCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCe
Confidence 7788999999999999999976 68999999 88877644 4444432 4456799999999999999999999998643
Q ss_pred -EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCC
Q psy12425 78 -SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEG 156 (591)
Q Consensus 78 -~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 156 (591)
+..+.|.|...|.....+.... +..+
T Consensus 89 ~~~~~~l~v~~~~~~~~~~~~~~-----------------------------------------------------~~~g 115 (291)
T 1qz1_A 89 SEATVNVKIFQKLMFKNAPTPQE-----------------------------------------------------FKEG 115 (291)
T ss_dssp EEEEEEEEEECCSEEEECCSSEE-----------------------------------------------------EETT
T ss_pred eEEEEEEEeeccccccCCCCccc-----------------------------------------------------ccCC
Confidence 5667777765432111111111 1134
Q ss_pred cEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCcc
Q psy12425 157 QEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAW 236 (591)
Q Consensus 157 ~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~ 236 (591)
....+.|.+... ....+.|......... .....
T Consensus 116 ~~v~l~C~~~~~-----------------------------------p~~~v~W~~~~~~~~~-----------~~~~~- 148 (291)
T 1qz1_A 116 EDAVIVCDVVSS-----------------------------------LPPTIIWKHKGRDVIL-----------KKDVR- 148 (291)
T ss_dssp SCEEECCEEECS-----------------------------------SCCEEEEEETTSCSST-----------TCCTT-
T ss_pred CeEEEEEEeccC-----------------------------------CCCEEEEEECCEEccc-----------CCCce-
Confidence 444555555310 0023567653211000 00000
Q ss_pred EEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeec--cccceeccccEEEEE
Q psy12425 237 QRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL--RNANAIQNHNAQFQC 314 (591)
Q Consensus 237 ~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~c 314 (591)
. .......|.|.++...|.|.|+|.|.|..+... ......+.+. .+|.+.... ....+..|+.+.|.|
T Consensus 149 ~----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~-~~~~~~l~v~-----~~p~~~~~~~~~~~~~~~g~~v~l~C 218 (291)
T 1qz1_A 149 F----IVLSNNYLQIRGIKKTDEGTYRCEGRILARGEI-NFKDIQVIVN-----VPPTVQARQSIVNATANLGQSVTLVC 218 (291)
T ss_dssp E----EECTTSCEEETTCCGGGCEEEEEEEEEGGGTEE-EEEEEEEEEE-----EEEEEEESCSEEEEETTSCCCEEEEE
T ss_pred E----EEccCCcEEEccCccccCeEEEEEEEecCCCce-eeEEEEEEEe-----cCCcccccccccccccccCceEEEEE
Confidence 0 112345799999999999999999998654321 1122333333 345554432 244678899999999
Q ss_pred EEcCCCCCeeEEecCCccCCCCCc--eEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEec
Q psy12425 315 TITGCPKPTISWLKGSREITPSAR--HHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMT 384 (591)
Q Consensus 315 ~~~~~p~~~v~W~~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~ 384 (591)
.+.|.|.+.+.|++++..+..... ...........|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 219 ~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 219 DADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp EEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 999999999999999988876541 2222333445899999999999999999999999988888888864
No 60
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.95 E-value=2.1e-26 Score=215.76 Aligned_cols=261 Identities=10% Similarity=0.066 Sum_probs=186.7
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeE
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTIS 325 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~ 325 (591)
...|.|.++...|.|.|+|.|.|..+ ...+.+.. +... ....+.+|+.+.|.|.+.+.|.+.+.
T Consensus 66 ~~~L~I~~v~~~D~G~Y~C~~~n~~~-------~~~l~V~~--------~~~~-~~~~v~~G~~v~l~C~~~~~p~~~v~ 129 (363)
T 1wio_A 66 NFPLIIKNLKIEDSDTYICEVEDQKE-------EVQLLVFG--------LTAN-SDTHLLQGQSLTLTLESPPGSSPSVQ 129 (363)
T ss_dssp CCCEEECSCCGGGCEEEEEEETTEEE-------EEEEEEEE--------EEES-SCSSEESBSCEEEEEECCTTCCCCEE
T ss_pred eEEEEECCCCHHHCEEEEEEEEECCC-------cEEEEEEe--------CCCC-CceEEecCCCEEEEEEcCCCCCCeEE
Confidence 56799999999999999999988643 23333321 1112 22457899999999999999999999
Q ss_pred EecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCe
Q psy12425 326 WLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGEN 405 (591)
Q Consensus 326 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~ 405 (591)
|++++..+ .. ....|.|.++..+|+|.|+|.|.|..+.......+.|...|... ....+.+|+.
T Consensus 130 W~~~~~~~-------~~---~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~------~~~~~~~G~~ 193 (363)
T 1wio_A 130 CRSPRGKN-------IQ---GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS------SIVYKKEGEQ 193 (363)
T ss_dssp EECSSSCE-------EE---ESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSE------EEEEEETBCC
T ss_pred EEcCCCcc-------cc---cceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCC------CceEEecCCE
Confidence 99987543 11 12379999999999999999999987777777788887655432 4456788999
Q ss_pred EEEEEeeec-----cCCCeEEEeeCCeEeee--------ccceEEEe----------cCCeeEEEEeccCCCcceeEEEE
Q psy12425 406 VVVKIPFTG-----YPKPKITWYRDNEVIES--------GGHFHVET----------SERHAILTIRDASNVDTAPYRVV 462 (591)
Q Consensus 406 ~~l~c~~~~-----~p~~~v~W~~~~~~~~~--------~~~~~~~~----------~~~~~~l~i~~~~~~~~g~y~c~ 462 (591)
+.|.|.+.+ .|.|.+.|+++|..+.. +..+.+.. .+....|.|.++..+|+|.|+|.
T Consensus 194 v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 273 (363)
T 1wio_A 194 VEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLT 273 (363)
T ss_dssp EEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEE
T ss_pred EEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEE
Confidence 999998877 78899999999987765 34444432 22355999999999999999999
Q ss_pred EEcC--CCccceEEEEEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEE
Q psy12425 463 AEND--LGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMA 540 (591)
Q Consensus 463 a~n~--~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~ 540 (591)
|.|. .|..+..+.|.|...+ ...+.|.|..... +.....+.|...+... .....+.
T Consensus 274 a~n~~~~g~~~~~~~l~V~~v~------------g~~~~l~C~~~g~----p~p~~~i~W~~~~~~~------~~~~~l~ 331 (363)
T 1wio_A 274 LALEAKTGKLHQEVNLVVMRAT------------QLQKNLTCEVWGP----TSPKLMLSLKLENKEA------KVSKREK 331 (363)
T ss_dssp ECBTTTTCCEEEEEEEEEEEEC------------CCSSSEEEEEESS----CCTTCCEEEECSSSSC------SEEESSS
T ss_pred EEEhhhcCeEEEEEeEEEEEec------------CCCeeEEEEEccc----cCCCccEEEEeCCCce------eeeeeee
Confidence 9999 9988888888887443 3334455543110 0001011111111110 0124567
Q ss_pred EcCcccCceEEEEEEEEcCC
Q psy12425 541 ITGLSPGHQYEFRVYAENVY 560 (591)
Q Consensus 541 i~~l~~~~~Y~~~v~A~n~~ 560 (591)
|.++.+.+.+.|+|.|.|..
T Consensus 332 i~~v~~~d~G~Y~C~a~~~~ 351 (363)
T 1wio_A 332 AVWVLNPEAGMWQCLLSDSG 351 (363)
T ss_dssp EEEESSCCSEEEEEEECSSS
T ss_pred eeeeccccceeEEEEEecCC
Confidence 78999999999999998643
No 61
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.95 E-value=1e-25 Score=204.10 Aligned_cols=255 Identities=16% Similarity=0.172 Sum_probs=184.2
Q ss_pred CeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCC
Q psy12425 196 PVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLP 275 (591)
Q Consensus 196 ~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~ 275 (591)
.......|..++|.|.... .+. |...+...+.. ......|.|.++...|.|.|+|.|.| |.
T Consensus 20 ~~~~v~~G~~v~l~C~~~~-----~i~-----W~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~--- 80 (290)
T 2o26_X 20 SELIVEAGDTLSLTCIDPD-----FVR-----WTFKTYFNEMV----ENKKNEWIQEKAEATRTGTYTCSNSN--GL--- 80 (290)
T ss_dssp SEEEEETTSCEEEEEECTT-----EEE-----EEEECSSSCEE----EECSSEEEETTCCGGGCEEEEEEESS--SC---
T ss_pred CeEEEcCCCcEEEEECCCC-----cEE-----EecCCcceeee----cCCCceEEEeccCHHhCeEEEEEeeC--Cc---
Confidence 4556678999999999742 222 22222222111 12338899999999999999999998 43
Q ss_pred CCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCC-CeeEE-ecCCccCCCCCceEEEEeCCeEEEEEc
Q psy12425 276 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK-PTISW-LKGSREITPSARHHIFAEGDTYTLIIN 353 (591)
Q Consensus 276 s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~-~~v~W-~~~~~~~~~~~~~~~~~~~~~~~l~i~ 353 (591)
.....+.+.. +|.+........+.+|+.+.|.|.+.+ |. +.+.| .+++..+....++....++ .|.|.
T Consensus 81 -~~~~~l~V~~-----~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~ 150 (290)
T 2o26_X 81 -TSSIYVFVRD-----PAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKA---GITIK 150 (290)
T ss_dssp -EEEEEEEEEC-----SSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTT---EEEEE
T ss_pred -cEEEEEEEeC-----CCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCC---CEEEe
Confidence 2445555552 333334455677889999999999996 77 89999 5788887766555554443 69999
Q ss_pred ceecccce-EEEEEEEeCCcce-eeeeEEEEe----cCCcccCCCCcccceeecCCCeEEEEEeeeccCCCe-EEEeeCC
Q psy12425 354 SVYGVDAD-EYVCRAVNKGGVK-STKAELIIM----TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPK-ITWYRDN 426 (591)
Q Consensus 354 ~~~~~d~g-~y~c~a~n~~g~~-~~~~~l~v~----~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~-v~W~~~~ 426 (591)
++..+|+| .|+|.|.|..+.. +....+.|. .+|.+...+. ...+..|+.+.|.|.+.|.|.|. +.|++++
T Consensus 151 ~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~---~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~ 227 (290)
T 2o26_X 151 NVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPET---SHLLKKGDTFTVVCTIKDVSTSVNSMWLKMN 227 (290)
T ss_dssp SCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCS---BCCCCTTCCEEEEEEEEESSTTCEEEEEEES
T ss_pred cccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCC---cceEecCCcEEEEEEEecCCcceeEEEecCC
Confidence 99999999 9999999986654 335777776 5666654432 23678899999999999999996 9999998
Q ss_pred eEe----eeccceEEE---ecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCC
Q psy12425 427 EVI----ESGGHFHVE---TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 427 ~~~----~~~~~~~~~---~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
..+ .......+. .......|.|.++..+|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 228 PQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp SSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred CCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 773 222222222 12346789999999999999999999999999999999988765
No 62
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.95 E-value=2.5e-28 Score=234.56 Aligned_cols=366 Identities=12% Similarity=0.142 Sum_probs=216.0
Q ss_pred CceeeeecCCeEEEEEEeccCC--CceEEEEECC--EE---e-e-------------cCCceeEEEe--CCeEEEEEccc
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQ--PMEVSLTKNG--RV---V-Q-------------SDDRFKFTVL--DDYIIIFIKEI 58 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p--~~~v~W~~~~--~~---~-~-------------~~~~~~~~~~--~~~~~l~i~~~ 58 (591)
|.++.+.+|++++|.|.+.+.+ .+.|.|+|++ .. + . ...|+.+... ++..+|.|.++
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (434)
T 1igy_B 6 SGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSL 85 (434)
T ss_dssp CCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSB
T ss_pred CCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCC
Confidence 6788999999999999998864 6789999963 22 1 0 0234443321 23468999999
Q ss_pred CCCCceEEEEEEEcCCeeeEEEEEEEEecCC-CCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceE
Q psy12425 59 RKEDAGDYTVNLSNSSGSVSGTFTINITGLP-GPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 137 (591)
Q Consensus 59 ~~~d~g~Y~c~~~n~~g~~~~~~~l~v~~~p-~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~ 137 (591)
+.+|+|.|+|.+.|..+.....+.|.|...+ .+|.. ... ++.
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i--~~~------------~~~----------------------- 128 (434)
T 1igy_B 86 TSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSV--YPL------------APG----------------------- 128 (434)
T ss_dssp CGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCE--EEE------------CCC-----------------------
T ss_pred ChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeE--EEc------------CCc-----------------------
Confidence 9999999999999865444445666665421 11110 000 000
Q ss_pred EEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCC
Q psy12425 138 CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDG 217 (591)
Q Consensus 138 ~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~ 217 (591)
..+..+....+.|.+.... | ..+.+.|.......
T Consensus 129 -------------~~~~~G~~v~L~C~~~g~~--------------------P-------------~p~~v~W~k~~~~~ 162 (434)
T 1igy_B 129 -------------SAAQTNSMVTLGCLVKGYF--------------------P-------------EPVTVTWNSGSLSS 162 (434)
T ss_dssp -------------CCCCCTTEEEEEEEEEEEB--------------------S-------------SCCEEEETTTTBCS
T ss_pred -------------cccCCCCcEEEEEEEeeec--------------------C-------------CCeEEEEeeCCcCC
Confidence 0012556677788775210 0 01457887632111
Q ss_pred CcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCC-------Ccc
Q psy12425 218 GSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP-------MAA 290 (591)
Q Consensus 218 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~-------~~~ 290 (591)
.+..+. ... ....+. ....|.|..+...| |.|+|.|.|..|.... ...+.+..+ ...
T Consensus 163 --~~~~~~--~~~-~~~~~~-------~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~---~~~~~~~~~~~~v~~~~~~ 226 (434)
T 1igy_B 163 --GVHTFP--AVL-QSDLYT-------LSSSVTVPSSPRPS-ETVTCNVAHPASSTKV---DKKIVPRDCGCKPCICTVP 226 (434)
T ss_dssp --SEEECC--CEE-CSSCEE-------EEEEEEEETTTTTS-SCCEEEEECTTTTCCE---EEECCCCCCCCCCCCCCCS
T ss_pred --CeEecC--cee-cCCcEE-------EEEEEEEcchhcCC-CcEEEEEEeCCCCccc---eeeccCCCCCCccccCCCC
Confidence 111000 000 001110 12457888888888 9999999998775321 111111100 001
Q ss_pred CCCeE-Eeeccccc-eeccccEEEEEEEcCCC----CCeeEEecCCccCCCCCceEEE--EeC---CeEEEEEcceeccc
Q psy12425 291 KAPEI-IVPLRNAN-AIQNHNAQFQCTITGCP----KPTISWLKGSREITPSARHHIF--AEG---DTYTLIINSVYGVD 359 (591)
Q Consensus 291 ~~p~~-~~~~~~~~-~~~g~~~~l~c~~~~~p----~~~v~W~~~~~~~~~~~~~~~~--~~~---~~~~l~i~~~~~~d 359 (591)
..|.+ ..++.... +.+|+.+.|.|.+.|.+ .+.|.|++++..+......... .++ ....|.|.++..+|
T Consensus 227 ~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 306 (434)
T 1igy_B 227 EVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLN 306 (434)
T ss_dssp SSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHH
T ss_pred cCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccC
Confidence 11333 33333222 78999999999999884 4589999998776533211110 111 12368999999999
Q ss_pred ceEEEEEEEeCCcceeeeeEE----EEecCCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeCCeEeeecc
Q psy12425 360 ADEYVCRAVNKGGVKSTKAEL----IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRDNEVIESGG 433 (591)
Q Consensus 360 ~g~y~c~a~n~~g~~~~~~~l----~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~~~~~ 433 (591)
.|.|+|.|.|..|.......+ .+..+|.+...+... ....|..+.|.|.+.|. |. +.|.|+++|..+....
T Consensus 307 ~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~---~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~ 383 (434)
T 1igy_B 307 GKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPK---EQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYK 383 (434)
T ss_dssp TCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCS---SSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCE
T ss_pred CCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCH---HHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCce
Confidence 999999999998865332222 234455554322211 12356789999999985 43 3899999998874322
Q ss_pred ceEEEecCC-----eeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 434 HFHVETSER-----HAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 434 ~~~~~~~~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
........+ .+.|.|.....+|.|.|+|.|.|....
T Consensus 384 ~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 384 NTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp ECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred eccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 111111111 245677777777899999999998654
No 63
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.95 E-value=3.4e-27 Score=219.18 Aligned_cols=169 Identities=19% Similarity=0.258 Sum_probs=121.4
Q ss_pred ccccEEEEEE-----EcCCCCCeeEEecCCccCCCCC-ceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcc----ee
Q psy12425 306 QNHNAQFQCT-----ITGCPKPTISWLKGSREITPSA-RHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGV----KS 375 (591)
Q Consensus 306 ~g~~~~l~c~-----~~~~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~----~~ 375 (591)
+|+.+.|.|. +.+.|.+.+.|++++..+.... ++.+.. ....|.|.++..+|+|.|+|.|.|..|. ..
T Consensus 134 ~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 211 (339)
T 3o4o_C 134 LSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVR--GTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNIT 211 (339)
T ss_dssp TTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECT--TSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEE
T ss_pred CCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcC--CcceEEEcccCHhhCeEEEEEEEECCCCeEEEEE
Confidence 3445566666 5666777888998888776553 333322 2237999999999999999999998874 45
Q ss_pred eeeEEEEecC-----CcccCCCCcccceeecCCCeEEEEEee---eccC-CCeEEEeeCCeEeee---------ccceEE
Q psy12425 376 TKAELIIMTA-----PKFNVPPRFRDTAYFDKGENVVVKIPF---TGYP-KPKITWYRDNEVIES---------GGHFHV 437 (591)
Q Consensus 376 ~~~~l~v~~~-----p~~~~~~~~~~~~~~~~g~~~~l~c~~---~~~p-~~~v~W~~~~~~~~~---------~~~~~~ 437 (591)
..+.|.|... |.+..+ .....+..|+.+.|.|.+ .|.| .+.+.|++++..+.. ...+.+
T Consensus 212 ~~~~l~V~~~~~~~~P~i~~~---~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~ 288 (339)
T 3o4o_C 212 RSIELRIKKKKEETIPVIISP---LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEY 288 (339)
T ss_dssp EEEEEEEECCCCCCCCEECCC---SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEEC
T ss_pred EEEEEEEEcCCCCCCCEEecC---CceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEe
Confidence 5677777753 343333 234456889999999999 8999 889999999876532 222222
Q ss_pred EecCC---eeEEEEeccCCCcc-eeEEEEEEcCCCccceEEEEEec
Q psy12425 438 ETSER---HAILTIRDASNVDT-APYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 438 ~~~~~---~~~l~i~~~~~~~~-g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
...+. ...|.|.++..+|. |.|+|.|.|..|..+..+.+.+.
T Consensus 289 ~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 289 SENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp CCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC-
T ss_pred cccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhHh
Confidence 22222 22799999999997 99999999999998877666543
No 64
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.95 E-value=1.3e-26 Score=219.32 Aligned_cols=295 Identities=18% Similarity=0.174 Sum_probs=199.3
Q ss_pred CceeeecCccc-CCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEE-cCCCCCe
Q psy12425 246 PSQINIPNLIE-GRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI-TGCPKPT 323 (591)
Q Consensus 246 ~~~~~i~~l~~-~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~ 323 (591)
...|.|.++.. .|.|.|+|.|.|..|..... ...+.+... ++..........+.+|+.+.|.|.+ .+.|.+.
T Consensus 60 ~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~--~~~l~v~~~----~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~ 133 (382)
T 1cs6_A 60 AGDLVISNPVKAKDAGSYQCVATNARGTVVSR--EASLRFGFL----QEFSAEERDPVKITEGWGVMFTCSPPPHYPALS 133 (382)
T ss_dssp TTEEEEESCCHHHHCEEEEEEEEETTEEEECC--CEEEEEEEE----CCCCSSCCCCEEEETTSCEEECCCCCSEESCCE
T ss_pred CCeEEEecccccccCEEEEEEEEcCCcEEEec--ceEEEeecc----ccccccCCCceEEecCCcEEEEeCCCCCCCCcE
Confidence 45789999886 99999999999987754322 233333211 1111122345668899999999996 4578899
Q ss_pred eEEecCCccCC--CCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCccee-----eeeEEEEec------CCcccC
Q psy12425 324 ISWLKGSREIT--PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS-----TKAELIIMT------APKFNV 390 (591)
Q Consensus 324 v~W~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~-----~~~~l~v~~------~p~~~~ 390 (591)
+.|++++..+. ...+..+. .....|.|.++...|+|.|+|.|.|..|... ....+.+.. +|.+..
T Consensus 134 i~W~~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~ 211 (382)
T 1cs6_A 134 YRWLLNEFPNFIPADGRRFVS--QTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKA 211 (382)
T ss_dssp EEEEESSTTCBCCCCSSEEEC--TTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEE
T ss_pred EEEEECCCccccccCceEEEe--cCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceec
Confidence 99999887643 22333222 2223799999999999999999999875432 223444432 233322
Q ss_pred CCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 391 PPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 391 ~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
. ......+..|+.+.|.|.+.+.|.+.+.|++++..+.. ........|.|.++..+|.|.|+|.|.|..|..
T Consensus 212 ~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~------~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 283 (382)
T 1cs6_A 212 K--FPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS------KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRD 283 (382)
T ss_dssp C--CCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSC------CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred c--CCCceEEeCCCeEEEEEEEccCCCCEEEEEECCccccc------EEecCCcEEEEccCChhhCEEEEEEEEcCCCeE
Confidence 1 12345678999999999999999999999998876532 122356789999999999999999999999999
Q ss_pred ceEEEEEecCCCC---CCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEee--eCCCCceEEeceeeeeEEEEcCcc
Q psy12425 471 SAIVKIQISDRPD---PPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKR--EHPMSSWIRVGNTRFTTMAITGLS 545 (591)
Q Consensus 471 ~~~~~~~v~~~p~---~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~--~~~~~~~~~~~~~~~~~~~i~~l~ 545 (591)
...+.+.+..+|. .|... ....+..+.|.|..... +...+.+... ......... .....+.|.++.
T Consensus 284 ~~~~~l~V~~~p~~~~~~~~~--~~~~g~~~~l~C~~~g~----p~p~v~W~~~g~~~~~~~~~~---~~~~~L~i~~v~ 354 (382)
T 1cs6_A 284 TYQGRIIIHAQPDWLDVITDT--EADIGSDLRWSCVASGK----PRPAVRWLRDGQPLASQNRIE---VSGGELRFSKLV 354 (382)
T ss_dssp EEEEEEEEEEEEEEEECCCCE--EEETTCCEEEECEEEEE----SCCEEEEEETTEECCCCSSEE---EETTEEEESSCC
T ss_pred EEEEEEEEecCCCcccCCCcc--EEcCCCeEEEEEEeeee----cCCEEEEEECCEECCCCceEE---EECCEEEECcCC
Confidence 8888998887663 22222 22346678888875321 1112222211 011111011 123479999999
Q ss_pred cCceEEEEEEEEcCCcCCCC
Q psy12425 546 PGHQYEFRVYAENVYGRSDP 565 (591)
Q Consensus 546 ~~~~Y~~~v~A~n~~G~~~~ 565 (591)
..+.+.|+|.|.|.+|....
T Consensus 355 ~~d~G~Y~C~a~N~~G~~~~ 374 (382)
T 1cs6_A 355 LEDSGMYQCVAENKHGTVYA 374 (382)
T ss_dssp GGGCEEEEEEEEETTEEEEE
T ss_pred cccCEEEEEEEEeCCCeEEE
Confidence 99999999999999997543
No 65
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.6e-25 Score=190.26 Aligned_cols=191 Identities=24% Similarity=0.494 Sum_probs=169.9
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
..+|.+...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+..++...+|.|.++..+|+|.|+|.+.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 35788888888888999999999999999999999999999999888888888888888999999999999999999999
Q ss_pred CCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEe
Q psy12425 370 KGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIR 449 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~ 449 (591)
..|.......+.|..+|.+...........+..|+.+.|.|.+.+.|.|.+.|++++..+.....+.+........|.|.
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 164 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMK 164 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEES
T ss_pred CCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEc
Confidence 99998888999998887766543334556678899999999999999999999999999988888888877778999999
Q ss_pred ccCC-CcceeEEEEEEcCCCccceEEEEEecC
Q psy12425 450 DASN-VDTAPYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 450 ~~~~-~~~g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
++.. +|.|.|+|.|.|..|..+..+.|.|.+
T Consensus 165 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 165 NVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp SCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 9995 899999999999999999988888865
No 66
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.94 E-value=2.8e-25 Score=201.29 Aligned_cols=263 Identities=16% Similarity=0.144 Sum_probs=174.0
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.+ .+.|+|++..+ ...... ...|.|.+++.+|+|.|+|.|.| |. ...+
T Consensus 19 ~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~-----~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~n--g~-~~~~ 84 (290)
T 2o26_X 19 QSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN-----EMVENK--KNEWIQEKAEATRTGTYTCSNSN--GL-TSSI 84 (290)
T ss_dssp SSEEEEETTSCEEEEEECTT----EEEEEEECSSS-----CEEEEC--SSEEEETTCCGGGCEEEEEEESS--SC-EEEE
T ss_pred CCeEEEcCCCcEEEEECCCC----cEEEecCCcce-----eeecCC--CceEEEeccCHHhCeEEEEEeeC--Cc-cEEE
Confidence 56788999999999999987 89999999866 111112 25899999999999999999999 44 6778
Q ss_pred EEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEE
Q psy12425 82 TINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 161 (591)
Q Consensus 82 ~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~ 161 (591)
.|.|..+|.+...+.......+ ....+
T Consensus 85 ~l~V~~~~~~~~~~~~~~~~~g-----------------------------------------------------~~v~l 111 (290)
T 2o26_X 85 YVFVRDPAKLFLVGLPLFGKED-----------------------------------------------------SDALV 111 (290)
T ss_dssp EEEEECSSCCBCCCCCEEEETT-----------------------------------------------------SCEEE
T ss_pred EEEEeCCCcccccccceEEecC-----------------------------------------------------CeEEE
Confidence 8888865543221111122222 22333
Q ss_pred EEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEe
Q psy12425 162 HVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV 241 (591)
Q Consensus 162 ~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 241 (591)
.|.+.+ + ....+.|... ++..+. .. ...
T Consensus 112 ~C~~~~------p-----------------------------~~~~v~W~~~---~g~~l~----------~~--~~~-- 139 (290)
T 2o26_X 112 RCPLTD------P-----------------------------QVSQYSLIEC---DGKSLP----------TD--LTF-- 139 (290)
T ss_dssp CCCBSC------C-----------------------------SCEEEEEEET---TSCCCC----------TT--CEE--
T ss_pred eCcCCC------C-----------------------------CCceEEEEeC---CCcCCC----------CC--Cce--
Confidence 333210 0 0034566321 111110 00 011
Q ss_pred eecCCceeeecCcccCCcE-EEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCC
Q psy12425 242 AICAPSQINIPNLIEGRQY-EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 320 (591)
Q Consensus 242 ~~~~~~~~~i~~l~~~~~~-~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p 320 (591)
.......|.|.++...|.| .|+|.|.|..|... .....+.+... ...+|.+...+....+.+|+.+.|.|.+.|.|
T Consensus 140 ~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~--s~~~~l~V~~~-~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p 216 (290)
T 2o26_X 140 VPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLH--SDKFTLKVREA-IKAIPVVSVPETSHLLKKGDTFTVVCTIKDVS 216 (290)
T ss_dssp EEETTTEEEEESCCGGGTTCEEEEEEEETTEEEE--CCCEEEEEECC-CCSCCEEECSCSBCCCCTTCCEEEEEEEEESS
T ss_pred eeCCCCCEEEecccHHHCCCEEEEEEEECCceEE--eEEEEEEEEeC-CCCCCccccCCCcceEecCCcEEEEEEEecCC
Confidence 0112357899999999999 99999999754322 22344444311 23578887777777899999999999999999
Q ss_pred CCe-eEEecCCccC----CCCCceEEE---EeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCC
Q psy12425 321 KPT-ISWLKGSREI----TPSARHHIF---AEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 386 (591)
Q Consensus 321 ~~~-v~W~~~~~~~----~~~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p 386 (591)
.+. +.|++++..+ .......+. .......|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 217 ~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 217 TSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp TTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred cceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 996 9999988773 322222222 11224589999999999999999999999999888888887654
No 67
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.94 E-value=8.4e-25 Score=198.45 Aligned_cols=264 Identities=17% Similarity=0.229 Sum_probs=192.9
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEec-CCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLK-GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
.+|.+...+.+..+.+|+.+.|.|.+.+.|. .+.|++ ++..+....++.+..++...+|.|.++..+|+|.|+|.|.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 4678888888888999999999999999885 899999 77777777788888888888999999999999999999999
Q ss_pred CCcce-eeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeec--cceEEEecCCeeEE
Q psy12425 370 KGGVK-STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESG--GHFHVETSERHAIL 446 (591)
Q Consensus 370 ~~g~~-~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~l 446 (591)
..|.. .....+.|..+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+. ....|
T Consensus 82 ~~g~~~~~~~~l~v~~~~~~~~~~---~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~---~~~~L 155 (291)
T 2wim_A 82 AKGQTQEATVVLEIYQKLTFREVV---SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML---ANNNL 155 (291)
T ss_dssp SSSCEEEEEEEEEEECCCBCCSCC---CSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEEC---TTSCE
T ss_pred ccCceEEEEEEEEecCCcceEeCC---CChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEc---cCCCE
Confidence 98876 456778888777665443 3456789999999999999999999999999877642 233322 24579
Q ss_pred EEeccCCCcceeEEEEEEcCCCcc--ceEEEEEecCCCCCCCCC---eeeeecCCeeEEEeeccccCCCcceeeEEEEee
Q psy12425 447 TIRDASNVDTAPYRVVAENDLGMD--SAIVKIQISDRPDPPQFP---TVEDIGHDSLALVWRAPIWDGGSNITNYIVEKR 521 (591)
Q Consensus 447 ~i~~~~~~~~g~y~c~a~n~~g~~--~~~~~~~v~~~p~~p~~~---~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~ 521 (591)
.|.++...|.|.|+|.|.|..+.. ...+.+.+..+|...... ......+..+.|.|..... +...+.+...
T Consensus 156 ~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~----p~p~v~W~~~ 231 (291)
T 2wim_A 156 QILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGS----PEPAISWFRN 231 (291)
T ss_dssp EETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCB----SCCEEEEEET
T ss_pred EEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecC----CCCeEEEEEC
Confidence 999999999999999999988654 355667776666432221 1222346789999986322 2222322221
Q ss_pred --eC-CCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCC
Q psy12425 522 --EH-PMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPST 567 (591)
Q Consensus 522 --~~-~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~ 567 (591)
.. ....... ......+.|.++...+.+.|+|.|.|.+|....+.
T Consensus 232 g~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~ 278 (291)
T 2wim_A 232 GKLIEENEKYIL--KGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQA 278 (291)
T ss_dssp TEECCCTTTEEE--CSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEE
T ss_pred CEECcCCccEEE--cCCccEEEEeeCCcccCEEEEEEEEECCCceeeeE
Confidence 11 1111111 11235799999999999999999999999765443
No 68
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.94 E-value=3.8e-25 Score=187.82 Aligned_cols=190 Identities=34% Similarity=0.572 Sum_probs=163.8
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCC-CceEEE-EeCCeEEEEEcceecccceEEEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPS-ARHHIF-AEGDTYTLIINSVYGVDADEYVCRA 367 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~-~~~~~~-~~~~~~~l~i~~~~~~d~g~y~c~a 367 (591)
+.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++.+. ..++..+|.|.++..+|+|.|+|.|
T Consensus 2 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 35788888888889999999999999999999999999999887654 355544 3455679999999999999999999
Q ss_pred EeCCcceeeeeEEEEecCCcccCCCCcc--cceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeE
Q psy12425 368 VNKGGVKSTKAELIIMTAPKFNVPPRFR--DTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI 445 (591)
Q Consensus 368 ~n~~g~~~~~~~l~v~~~p~~~~~~~~~--~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 445 (591)
.|..|.......|.|..+|.+..++... ....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+........
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (197)
T ss_dssp EETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEE
T ss_pred EECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceE
Confidence 9999998888999998888776554332 23457889999999999999999999999999998778888877778899
Q ss_pred EEEec-cCCCcceeEEEEEEcCCCccceEEEEEec
Q psy12425 446 LTIRD-ASNVDTAPYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 446 l~i~~-~~~~~~g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
|.|.+ +...|.|.|+|.|.|..|..+..+.|.|.
T Consensus 162 L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 162 LVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 99999 99999999999999999999888888875
No 69
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=212.60 Aligned_cols=226 Identities=18% Similarity=0.143 Sum_probs=163.0
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEE-cCCCCCee
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI-TGCPKPTI 324 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~v 324 (591)
..+|.|.++...|.|.|+|.|.|..+... .....+.+.. ..++.+...+.......|+.+.|.|.+ .|.|.+.+
T Consensus 73 ~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~--~~~~~~~v~~---~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i 147 (308)
T 4fom_A 73 DATITLHNIGFSDSGKYICKAVTFPLGNA--QSSTTVTVLV---EPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHI 147 (308)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTTEEE--EEEEEEEEEB---CCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEE
T ss_pred ceEEEEccCCHHHCEEEEEEEeeCCCcce--eeeeEEEeee---ccccccccccceeEEcCCceEEEEEEecCCcCCceE
Confidence 35799999999999999999988643221 1223333331 112223334445556678999999985 68999999
Q ss_pred EEecCCccCCCCCceEEE-EeCCeEEEEEcceecccceEEEEEEEeCCcceee--eeEEEEecCCcccCCCCcccceeec
Q psy12425 325 SWLKGSREITPSARHHIF-AEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST--KAELIIMTAPKFNVPPRFRDTAYFD 401 (591)
Q Consensus 325 ~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~--~~~l~v~~~p~~~~~~~~~~~~~~~ 401 (591)
.|++++..+......... .......|.|.++...|.|.|+|.|.|..|.... ...|.|..+|.+...+. ....+.
T Consensus 148 ~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~--~~~~~~ 225 (308)
T 4fom_A 148 DWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGY--DGNWFV 225 (308)
T ss_dssp EECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCC--CSCEET
T ss_pred EEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEccc--ceeeee
Confidence 999998876532111000 0001236999999999999999999998876643 45566677776654332 334557
Q ss_pred CCCeEEEEEeeeccCCC-eEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecC
Q psy12425 402 KGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 402 ~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
.|+.+.|.|.+.|.|.| .+.|++++..+.... ...+...|.|.++..+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 226 ~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~-----~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~ 300 (308)
T 4fom_A 226 GRKGVNLKCNADANPPPFKSVWSRLDGQWPDGL-----LASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISD 300 (308)
T ss_dssp TCCSCEEECCEEEESCEEEEECCBSSSCCCSSC-----BCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEEC
T ss_pred ccccEEEEEEEecCCCCcEEEEEECCeECCCcE-----EEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEc
Confidence 78999999999999998 699999987765432 123456778899999999999999999999999999999998
Q ss_pred CCC
Q psy12425 481 RPD 483 (591)
Q Consensus 481 ~p~ 483 (591)
+|.
T Consensus 301 ~P~ 303 (308)
T 4fom_A 301 PPH 303 (308)
T ss_dssp CC-
T ss_pred CCC
Confidence 874
No 70
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.94 E-value=8.5e-25 Score=198.21 Aligned_cols=262 Identities=18% Similarity=0.221 Sum_probs=186.4
Q ss_pred CeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCC
Q psy12425 196 PVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLP 275 (591)
Q Consensus 196 ~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~ 275 (591)
..+....|..++|.|.... .+.+| ..+...+. . ........|.|.++...|.|.|+|.+.|..|..
T Consensus 12 ~~~~v~~G~~v~L~C~~~~-----~v~W~-----~~~~~~~~-~-~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-- 77 (289)
T 3ejj_X 12 PELVVEPGETVTLRCVSNG-----SVEWD-----GPISPYWT-L-DPESPGSTLTTRNATFKNTGTYRCTELEDPMAG-- 77 (289)
T ss_dssp SEEEECTTCCEEEEEECSS-----CCEEE-----CSCSSSSE-E-CCCSSCCEEEESSCCGGGCEEEEEECCC-------
T ss_pred ceEEECCCCCEEEEEEeCC-----cEEEc-----cCCCceEE-E-eccCCccEEEEeeeccccCEEEEEEEeccCCcc--
Confidence 3455667889999998742 24433 22222221 1 122345789999999999999999999877642
Q ss_pred CCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCe-eEEec-CCccCCCCCceEEEEeCCeEEEEEc
Q psy12425 276 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLK-GSREITPSARHHIFAEGDTYTLIIN 353 (591)
Q Consensus 276 s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~-v~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~ 353 (591)
.....+.+..+ ..+ +...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+....++.+..++ .|.|.
T Consensus 78 -~~~~~l~V~~~---~~~-~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~ 149 (289)
T 3ejj_X 78 -STTIHLYVKDP---AHS-WNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWR---GFIIR 149 (289)
T ss_dssp -CEEEEEEECCS---SCS-EEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTT---EEEES
T ss_pred -eeEEEEEEeCC---Ccc-eecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCC---CEEEe
Confidence 24455555531 112 45555677789999999999999977765 99975 66666666666664444 69999
Q ss_pred ceecccceEEEEEEE-eCCcceeeeeEEEEe----cCCcccCCCCcccceeecCCCeEEEEEeeec-cCCCeEEEeeCCe
Q psy12425 354 SVYGVDADEYVCRAV-NKGGVKSTKAELIIM----TAPKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKPKITWYRDNE 427 (591)
Q Consensus 354 ~~~~~d~g~y~c~a~-n~~g~~~~~~~l~v~----~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~~v~W~~~~~ 427 (591)
++..+|+|.|+|.|. +..+..+....|.|. .+|.+...+ ....+..|+.+.|.|.+.+ .|.+.+.|++++.
T Consensus 150 ~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~---~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~ 226 (289)
T 3ejj_X 150 KAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEP---SKLVRIRGEAAQIVCSATNAEVGFNVILKRGDT 226 (289)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEES---SSEECCSSSCEEEEEEEEESSSCCEEEEEETTE
T ss_pred ecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecC---CceEEEeCCcEEEEEEeCCCCCceEEEEEECCE
Confidence 999999999999999 555566777888887 455554433 2344578999999999998 7999999999998
Q ss_pred EeeeccceEEEe--cCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCC
Q psy12425 428 VIESGGHFHVET--SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 428 ~~~~~~~~~~~~--~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
.+.......... ......|.|.++..+|.|.|+|.|.|..|..+.++.|.+..++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 227 KLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp ECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred EeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 876433222111 1136789999999999999999999999999999999887654
No 71
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.94 E-value=4.2e-25 Score=187.11 Aligned_cols=186 Identities=26% Similarity=0.468 Sum_probs=160.8
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCC--ceEEEEeCCeEEEEEcceecccceEEEEEEE
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA--RHHIFAEGDTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ++.+...+...+|.|.++...|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 46788888888889999999999999999999999999998887654 5666667778899999999999999999999
Q ss_pred eCCcceeeeeEEEEe---cCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeE
Q psy12425 369 NKGGVKSTKAELIIM---TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI 445 (591)
Q Consensus 369 n~~g~~~~~~~l~v~---~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 445 (591)
|..|.......+.|. .+|.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+.....+.+...+....
T Consensus 84 n~~~~~~~~~~l~v~~~~~~p~~~~~~---~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 160 (194)
T 2a38_A 84 NGSGQATSTAELLVKAETAPPNFVQRL---QSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYS 160 (194)
T ss_dssp ETTEEEEEEEEEEEECCCEEEEEEECC---CCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEE
T ss_pred cCCceEeEEEEEEEccCCCCCEEEeCC---ccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEE
Confidence 999988888888887 444444333 34567889999999999999999999999999998888888877777889
Q ss_pred EEEeccCCCcceeEEEEEEcCCCccceEEEEEec
Q psy12425 446 LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 446 l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
|.|.++...|.|.|+|.|.|..|..+..+.|.|+
T Consensus 161 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 161 LLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 9999999999999999999999998888888763
No 72
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.94 E-value=9.1e-25 Score=210.71 Aligned_cols=306 Identities=15% Similarity=0.190 Sum_probs=193.1
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcC-CCCC-e
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITG-CPKP-T 323 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~-~ 323 (591)
...|.|.+++..|.|.|+|.|.|..|... .....+.+.. ...+|.+..........+|+.+.|.|.+.+ .|.+ .
T Consensus 74 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~--~~~~~l~V~~--~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~ 149 (438)
T 1qgc_4 74 DFTLTIDPVEADDVATYYCQQSNEVPLTF--GAGTKLDLKR--ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN 149 (438)
T ss_dssp EEEEEESSCCGGGCEEEEEEECSSTTCCB--CCCEEEEECC--CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEE
T ss_pred cEEEEeCCCcCcCCeeEEEEEecCCCccc--cCceeEEecC--CCCCCEEEecCCChhhccCCceEEEEEEccccCCCcE
Confidence 45799999999999999999999776321 1233444432 224677666444444557889999999987 6777 8
Q ss_pred eEEecCCccCCCCCceE--EEEe--CC---eEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCccc
Q psy12425 324 ISWLKGSREITPSARHH--IFAE--GD---TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRD 396 (591)
Q Consensus 324 v~W~~~~~~~~~~~~~~--~~~~--~~---~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~ 396 (591)
+.|++++..+....... .... +. ...|.|.++..+|+|.|+|.|.|..|.......+.....+..... ..
T Consensus 150 v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~---~~ 226 (438)
T 1qgc_4 150 VKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVE---SG 226 (438)
T ss_dssp EEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEE---EC
T ss_pred EEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEec---CC
Confidence 99999998776541111 1111 11 237999999999999999999998877533332221111111111 12
Q ss_pred ceeecCCCeEEEEEeeeccC--CCeEEEeeC--CeEee-----------------eccceEEEec--CCeeEEEEeccCC
Q psy12425 397 TAYFDKGENVVVKIPFTGYP--KPKITWYRD--NEVIE-----------------SGGHFHVETS--ERHAILTIRDASN 453 (591)
Q Consensus 397 ~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~ 453 (591)
...+..|+.+.|.|.+.|.| .+.+.|+++ +..+. ...++.+... .....|.|.+++.
T Consensus 227 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 306 (438)
T 1qgc_4 227 GGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRS 306 (438)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred ceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCCh
Confidence 34578999999999999998 679999996 54332 1234444432 3467899999999
Q ss_pred CcceeEEEEEEcCCC-----ccceEEEEEecCCC-CCCCCCee----eeecCCeeEEEeeccccCCCcceeeEEEEeeeC
Q psy12425 454 VDTAPYRVVAENDLG-----MDSAIVKIQISDRP-DPPQFPTV----EDIGHDSLALVWRAPIWDGGSNITNYIVEKREH 523 (591)
Q Consensus 454 ~~~g~y~c~a~n~~g-----~~~~~~~~~v~~~p-~~p~~~~~----~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~ 523 (591)
+|+|.|+|.|.|..| .......+.|...+ .+|..... ....+..++|.|..... .+.. ..+.|...
T Consensus 307 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~---~P~~-~~v~W~~~ 382 (438)
T 1qgc_4 307 ADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGY---FPEP-VTVTWNSG 382 (438)
T ss_dssp GGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESC---BSSC-CEEEEGGG
T ss_pred hhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccc---cCCC-cEEEEecC
Confidence 999999999999554 22244566665422 23321111 11346788999986321 1111 12333322
Q ss_pred CCCce------EEece--eeeeEEEEcCcccCceEEEEEEEEcCCcCC
Q psy12425 524 PMSSW------IRVGN--TRFTTMAITGLSPGHQYEFRVYAENVYGRS 563 (591)
Q Consensus 524 ~~~~~------~~~~~--~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~ 563 (591)
+...- ....+ .....+.|.+....+ +.|+|.|.|.+|..
T Consensus 383 g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~ 429 (438)
T 1qgc_4 383 SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASST 429 (438)
T ss_dssp TCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTE
T ss_pred CCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCc
Confidence 21110 00111 112357888888777 99999999999953
No 73
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.94 E-value=2.4e-24 Score=195.67 Aligned_cols=254 Identities=17% Similarity=0.236 Sum_probs=184.8
Q ss_pred eeccccceeccccEEEEEEEcC-------CCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 297 VPLRNANAIQNHNAQFQCTITG-------CPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 297 ~~~~~~~~~~g~~~~l~c~~~~-------~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
..+.+..+..|+.+.|.|.+.+ .|.+.|.|.+++..+... ++.+. ++....|.|.++...+ |.|+|.|.+
T Consensus 9 i~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~-~~~~~~L~i~~~~~~~-g~Y~C~a~~ 85 (303)
T 1i1r_A 9 ISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTII-NRTASSVTFTDIASLN-IQLTCNILT 85 (303)
T ss_dssp EESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEE-ETTEEEEEECSCCCSE-EEEEEEEEE
T ss_pred EccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeee-CCcEEEEEEcCcCCCc-eEEEEeccc
Confidence 3446677889999999999985 588999999999887543 44433 4446689999999884 999999988
Q ss_pred CCcce--eeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEe--------
Q psy12425 370 KGGVK--STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET-------- 439 (591)
Q Consensus 370 ~~g~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-------- 439 (591)
..+.. .....+.+..+| +....|.|...+.....+.|........ ...|.+..
T Consensus 86 ~g~~~~~~~~~~l~v~~~P----------------~~P~~l~~~~~~~~~v~l~W~~~~~~~~-~~~Y~v~~~~~~~~~~ 148 (303)
T 1i1r_A 86 FGQLEQNVYGITIISGLPP----------------EKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFA 148 (303)
T ss_dssp TTTEEEEEEEEEEEEECCC----------------CCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECC
T ss_pred CCCcceEEEEEEEeccCCC----------------CCCeeeEEEECCCCcEEEEccCCCCCCC-CcCEEEEEEecCCCCc
Confidence 42222 223444444443 2334567777666677778865422111 11232221
Q ss_pred -----cCCeeEEEEecc-CCCcceeEEEEEEcCCCccc-eEEEEEec--CCCCCCCCCeeeee--cCCeeEEEeeccccC
Q psy12425 440 -----SERHAILTIRDA-SNVDTAPYRVVAENDLGMDS-AIVKIQIS--DRPDPPQFPTVEDI--GHDSLALVWRAPIWD 508 (591)
Q Consensus 440 -----~~~~~~l~i~~~-~~~~~g~y~c~a~n~~g~~~-~~~~~~v~--~~p~~p~~~~~~~~--~~~~v~l~W~~p~~~ 508 (591)
......+.|.++ .+...|.|+|.|.|..|... ....+... .+|.+|..+.+... +.+++.|+|++|...
T Consensus 149 ~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~ 228 (303)
T 1i1r_A 149 DCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIK 228 (303)
T ss_dssp CEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGG
T ss_pred cCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCC
Confidence 223467899999 89999999999999999873 23333322 47889988887654 678999999988765
Q ss_pred CCcceeeEEEEeeeCCCCceEEec----eeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcce
Q psy12425 509 GGSNITNYIVEKREHPMSSWIRVG----NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDL 571 (591)
Q Consensus 509 ~~~~~~~y~v~~~~~~~~~~~~~~----~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~ 571 (591)
++ .+.+|+|+|+......|..+. ......+.|.+|.+++.|.|+|+|.|.+|.|.+|..+..
T Consensus 229 ~~-~i~~Y~v~y~~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~ 294 (303)
T 1i1r_A 229 SV-IILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEE 294 (303)
T ss_dssp GT-SCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCC
T ss_pred Cc-ccEEEEEEEEeCCCCCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCc
Confidence 54 899999999988878898763 445678999999999999999999999999988876653
No 74
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.94 E-value=2.9e-25 Score=202.58 Aligned_cols=263 Identities=18% Similarity=0.308 Sum_probs=177.1
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEE--EeCCeEEEEEcceec-ccceEEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF--AEGDTYTLIINSVYG-VDADEYVCR 366 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~-~d~g~y~c~ 366 (591)
..+|.+...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+... ++.+. .++....|.|.++.. .|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 46888988888899999999999999999999999999999887543 34333 233457899999998 999999999
Q ss_pred EEeCCcceeeeeEEEEecCCc-------ccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccc-eEEE
Q psy12425 367 AVNKGGVKSTKAELIIMTAPK-------FNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGH-FHVE 438 (591)
Q Consensus 367 a~n~~g~~~~~~~l~v~~~p~-------~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~-~~~~ 438 (591)
|.|..|.....+.|.|...+. +...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+..... ..+.
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~---~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~ 159 (304)
T 2yd9_A 83 AQNSVGEITVHAKLTVLREDQLPSGFPNIDMGP---QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIK 159 (304)
T ss_dssp EECSSCEECCEEEEEEECGGGCCTTCCEEEECC---CCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEE
T ss_pred EECCCCeEEEEEEEEEeccccCCCCCCeeecCC---ccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEE
Confidence 999999988888999987633 22222 335578899999999999999999999999988865432 1222
Q ss_pred ecCCeeEEEEeccCCCcceeEEEEEEcCCCccceE-EEEEecCCCCCCCCC----eeeeecCCeeEEEeeccccCCCcce
Q psy12425 439 TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAI-VKIQISDRPDPPQFP----TVEDIGHDSLALVWRAPIWDGGSNI 513 (591)
Q Consensus 439 ~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~-~~~~v~~~p~~p~~~----~~~~~~~~~v~l~W~~p~~~~~~~~ 513 (591)
. .....|.|.++...|.|.|+|.|.|..|..... ..+.+.....+|... ......+..+.|.|..... +.
T Consensus 160 ~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~----p~ 234 (304)
T 2yd9_A 160 Q-LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGS----PM 234 (304)
T ss_dssp E-CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEE----SC
T ss_pred e-CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeee----CC
Confidence 2 234589999999999999999999999876432 445543322222110 0112345678888875321 11
Q ss_pred eeEEEEeeeCCCC-ceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCC
Q psy12425 514 TNYIVEKREHPMS-SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDP 565 (591)
Q Consensus 514 ~~y~v~~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~ 565 (591)
..+ .|...+.. ............+.+.++ .+.+.|+|.|.|.+|....
T Consensus 235 p~v--~W~~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~ 283 (304)
T 2yd9_A 235 PYV--KWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEA 283 (304)
T ss_dssp CEE--EEEETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEEETTEEEEE
T ss_pred CEE--EEEECCEECCCcccccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEE
Confidence 122 22211100 000001122345777776 4679999999999997543
No 75
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.94 E-value=8.3e-25 Score=194.95 Aligned_cols=151 Identities=13% Similarity=0.202 Sum_probs=112.4
Q ss_pred eeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCC-ccee---eeeE
Q psy12425 304 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKG-GVKS---TKAE 379 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~-g~~~---~~~~ 379 (591)
+.+|+.+.|.|.+. |.+.+.| ++..+... +....|.|..+..+|.|.|+|.|.|.. |... ....
T Consensus 110 v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~--------~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~ 177 (265)
T 2oz4_A 110 VSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRE 177 (265)
T ss_dssp EETTCEEEEEEECC--TTSEEEE--SSCSSSCC--------SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEE
T ss_pred ecCCCcEEEEEEcc--CCCEEEE--CCEEccCC--------CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEE
Confidence 34566677777776 6777888 55555221 123468889999999999999998544 6654 6678
Q ss_pred EEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeE
Q psy12425 380 LIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPY 459 (591)
Q Consensus 380 l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y 459 (591)
|.|..+|.+..... .....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... . +..+..+|+|.|
T Consensus 178 l~V~~~p~~~~~~~-p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~g-----------~--~~~v~~~d~G~Y 243 (265)
T 2oz4_A 178 LRVLYGPRLDERDC-PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIG-----------E--SVTVTRDLEGTY 243 (265)
T ss_dssp EEEEEEEECCGGGS-CSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTT-----------S--CEECCGGGCEEE
T ss_pred EEEEeCCccccccC-CCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCCC-----------c--EEEeehhhCeEE
Confidence 88988887643321 234567889999999999999999999999987322111 1 123778999999
Q ss_pred EEEEEcCCCccceEEEEEecC
Q psy12425 460 RVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 460 ~c~a~n~~g~~~~~~~~~v~~ 480 (591)
+|.|.|..|..+..+.|.|..
T Consensus 244 ~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 244 LCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEEEEEec
Confidence 999999999999999998865
No 76
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.94 E-value=1.8e-24 Score=192.97 Aligned_cols=155 Identities=15% Similarity=0.192 Sum_probs=119.2
Q ss_pred eeccccEEEEEEE-cCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEE
Q psy12425 304 AIQNHNAQFQCTI-TGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 382 (591)
Q Consensus 304 ~~~g~~~~l~c~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v 382 (591)
+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. .. ....|.|.++..+|.|.|+|.|.|..+..+....|.|
T Consensus 94 ~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~------~~--~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V 165 (262)
T 3rjd_A 94 FTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF------FH--WNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTV 165 (262)
T ss_dssp EETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE------EE--ECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEE
T ss_pred EecCCeEEEEEEccCCCCCceEEEEECCccccc------cC--CCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEe
Confidence 4567788999999 7788889999998876531 11 1236999999999999999999999988888888888
Q ss_pred ecC---CcccCCCCcccceeecCCCeEEEEEeeeccCC-C----eEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCC
Q psy12425 383 MTA---PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK-P----KITWYRDNEVIESGGHFHVETSERHAILTIRDASNV 454 (591)
Q Consensus 383 ~~~---p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~-~----~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 454 (591)
... |.+...+ ...+..|+.+.|.|.+.+.|. + .+.|++++..+... .....|.|.++..+
T Consensus 166 ~~~~~~p~~~~~~----~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~--------~~~~~L~i~~v~~~ 233 (262)
T 3rjd_A 166 KELFPAPVLNASV----TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR--------NTSSEYQILTARRE 233 (262)
T ss_dssp ECSSCCCEEEESS----CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE--------ESCCEEEESSCCGG
T ss_pred ccCCCCCeEeecC----ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc--------CCCceEEEEEechh
Confidence 863 3333322 234678999999999999886 5 37888998876421 35678999999999
Q ss_pred cceeEEEEEEcCCCcc---ceEEEEEe
Q psy12425 455 DTAPYRVVAENDLGMD---SAIVKIQI 478 (591)
Q Consensus 455 ~~g~y~c~a~n~~g~~---~~~~~~~v 478 (591)
|.|.|+|.|.|..|.. +..+.+.|
T Consensus 234 d~G~Y~C~a~n~~G~~~~~s~~~~l~V 260 (262)
T 3rjd_A 234 DSGLYWCEAATEDGNVLKRSPELELQV 260 (262)
T ss_dssp GCEEEEEEEEETTSSCEEECCCEEECE
T ss_pred hCeEEEEEEEcccCceEEecCCeEEEE
Confidence 9999999999999975 33444444
No 77
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.94 E-value=7.7e-25 Score=188.35 Aligned_cols=176 Identities=24% Similarity=0.376 Sum_probs=153.3
Q ss_pred eeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeec--cceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEE
Q psy12425 398 AYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESG--GHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVK 475 (591)
Q Consensus 398 ~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~ 475 (591)
..+..|+.+.|.|.+.|.|.|.+.|+++|..+... .++.+........|.|.++...|.|.|+|.|.|..|..+..+.
T Consensus 28 ~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 107 (215)
T 3mtr_A 28 VYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFI 107 (215)
T ss_dssp EEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEE
Confidence 56788999999999999999999999999988765 4566666667899999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEece-----eeeeEEEEcCcccCceE
Q psy12425 476 IQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGN-----TRFTTMAITGLSPGHQY 550 (591)
Q Consensus 476 ~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~-----~~~~~~~i~~l~~~~~Y 550 (591)
+.+..+|.+|..+.+. ....++.|+|.+|..+++.++..|.++|+..+...|..... .....+.|.+|.+++.|
T Consensus 108 l~v~~~P~~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y 186 (215)
T 3mtr_A 108 LVQADTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTY 186 (215)
T ss_dssp EEECCCCCCCEEEEEE-EETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEE
T ss_pred EEECCCCCCCcceEEE-EecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEE
Confidence 9999999999877774 56788999999888788889999999999988888876521 22378999999999999
Q ss_pred EEEEEEEcCCcCCCCCCCcceEEec
Q psy12425 551 EFRVYAENVYGRSDPSTTSDLITTY 575 (591)
Q Consensus 551 ~~~v~A~n~~G~~~~s~~~~~~~t~ 575 (591)
.|+|+|.|.+|.|++|..+.+ +|+
T Consensus 187 ~~~~~A~N~~G~s~~S~~~~v-~T~ 210 (215)
T 3mtr_A 187 AVRLAALNGKGLGEISAASEF-KTQ 210 (215)
T ss_dssp EEEEEEEESSCBCCCCCCEEE-ECC
T ss_pred EEEEEEEeCCcccCcccceee-Eec
Confidence 999999999999999987654 444
No 78
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.93 E-value=1.2e-22 Score=191.96 Aligned_cols=440 Identities=13% Similarity=0.041 Sum_probs=259.1
Q ss_pred cceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCC
Q psy12425 96 LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPL 175 (591)
Q Consensus 96 ~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~ 175 (591)
++.....-....++|..|...+. -..|.+-...... .+. ......+.|..+.+++ +.+.+......
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~------ 75 (488)
T 2q7n_A 10 LKCTTNNMRVWDCTWPAPLGVSP--GTVKDICIKDRFH----SCH-PLETTNVKIPALSPGD-HEVTINYLNGF------ 75 (488)
T ss_dssp CCCEESSSSEEEEECCCCSSSCC--SCEEEEEEESSSE----EEE-ECSSSEEEEECCCSSC-EEEEEEESSSC------
T ss_pred ceeEecCceEEEEeeeCcCccCC--CceEEEEEecCCc----eeE-EeccceeEcccCCCCc-ceEEEeeccCc------
Confidence 34444455567899998773322 2346654433221 111 2467788999999988 46666533221
Q ss_pred CccCcccccCCCCCCCCCCCCeEEee-cCCeEEEEEecCCCC-CCcceEEEEEEeeecCC--CccEEEEee-ecCC-c--
Q psy12425 176 EGINPIKAKSPYDKPSPPGIPVVTQV-GGDFVNLSWDKPLDD-GGSRIQGYWIDKHEVGS--DAWQRVNVA-ICAP-S-- 247 (591)
Q Consensus 176 ~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~v~l~w~~~~~~-~~~~~~~y~~~~~~~~~--~~~~~~~~~-~~~~-~-- 247 (591)
.....+..+.....|.+|..+.+... ....+.|+|..+... .......|.|.+..... ..|...-.. .... .
T Consensus 76 ~~~~~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (488)
T 2q7n_A 76 QSKFTLNEKDVSLIPETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATWEIKVLQNPRTEPVALVLLNTMLSGKDTVQ 155 (488)
T ss_dssp EEEEEECSTTCEECCCCCCEEECCEETTTTEEEEEECBCGGGSCSSEEEEEEEECCCSSSSCSCCCEECCEECSSSCBCC
T ss_pred eeEEEEecCccccCCCCCeeEEEEEecCCCeEEEEEeCCCccccccCCeEEEEEEEEeccceEEEEEEEEEEecCCCcee
Confidence 11111222222235778877776666 478899999875432 11223568877544322 223331111 0011 0
Q ss_pred eee---ecCcccCCcEEEEEEEEc----CCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCC
Q psy12425 248 QIN---IPNLIEGRQYEFRVYAQN----EAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP 320 (591)
Q Consensus 248 ~~~---i~~l~~~~~~~y~c~a~n----~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p 320 (591)
... ...| ....|.+++++.. ..|.+.+|.-+...++... .+..+...+.+..+..|++++|.|.+.
T Consensus 156 ~w~w~s~~pl-~c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~---~~t~i~v~P~~~~v~~Gs~vtl~C~a~--- 228 (488)
T 2q7n_A 156 HWNWTSDLPL-QCATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWI---RNTETNVFPQDKVVLAGSNMTICCMSP--- 228 (488)
T ss_dssp EEEEECSSCC-SSSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCC---CCSSCCEECTTCEEESSCCCEEEECCS---
T ss_pred EeeccCCCcc-cccceEEEEEEEeccccccCCCCCcCCCChhhcCCc---CCCceEECCCCCEEcCCCCEEEEEECC---
Confidence 111 1122 3667888888885 3456667766666555421 344555666777789999999999998
Q ss_pred CCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceee
Q psy12425 321 KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYF 400 (591)
Q Consensus 321 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~ 400 (591)
.+.+.|++++..+... . .++....|+|.++...|+|.|.|.+.+ +.....+.+.+..+|..+... ....
T Consensus 229 ~~~I~W~~ng~~i~~~---r--i~~~~~~L~I~nl~~sd~g~y~~~C~~--~~~i~~~~l~v~~pP~~P~nl----~C~~ 297 (488)
T 2q7n_A 229 TKVLSGQIGNTLRPLI---H--LYGQTVAIHILNIPVSENSGTNIIFIT--DDDVYGTVVFAGYPPDVPQKL----SCET 297 (488)
T ss_dssp SCEEEEEETTEECCCE---E--CSSSCEEEECCSCCCCCSSCEEEEEEE--SSCEEEEEEEEECCCCCCCSC----EEEB
T ss_pred CCEEEEEECCEECchh---h--ccceEEEEEEeCCCcccCCcEEEEEEc--CCeEEEEEEEeeCCCCCCccc----EEEE
Confidence 4589999998776543 1 245566899999999999888887763 222346777777766543211 0111
Q ss_pred cCCCeEEEEEeeeccC------CC--eEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccce
Q psy12425 401 DKGENVVVKIPFTGYP------KP--KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSA 472 (591)
Q Consensus 401 ~~g~~~~l~c~~~~~p------~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~ 472 (591)
.....+.+++...... .. .+.+.+.+....- ..... .......+.+........|.++|.|.|..|....
T Consensus 298 ~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c-~~~~~-~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~S 375 (488)
T 2q7n_A 298 HDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVF-HRIEG-LTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQS 375 (488)
T ss_dssp SSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEE-ECSSC-CCSSCEEEEEECCSSCCCCEEEEEEEETTEEEEE
T ss_pred cCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCC-ccccc-cCCceEEEEEcCCCCccEEEEEEEEEeCCCCccc
Confidence 1223333333221111 01 1122112111000 00000 0023345566544445789999999999998543
Q ss_pred EEEEEec--CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEE-ec--eeeeeEE--EEcCcc
Q psy12425 473 IVKIQIS--DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIR-VG--NTRFTTM--AITGLS 545 (591)
Q Consensus 473 ~~~~~v~--~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~-~~--~~~~~~~--~i~~l~ 545 (591)
...+.+. .+|.+|.++.+...+.+++.|+|++|...+ ..+..|+|+|+......|.. .. ......+ .|.+|.
T Consensus 376 ~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~-g~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~ 454 (488)
T 2q7n_A 376 AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFT-KINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLN 454 (488)
T ss_dssp EEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEEECS-SSEEEEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECSCC
T ss_pred eEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCC-CcceEEEEEEEECCCCCceEEEEEecCCCcEEEEEeCCCC
Confidence 3333322 368999999998888999999999886544 47899999999887766742 21 1123345 999999
Q ss_pred cCceEEEEEEEEcCCcCC---CCCCCcce
Q psy12425 546 PGHQYEFRVYAENVYGRS---DPSTTSDL 571 (591)
Q Consensus 546 ~~~~Y~~~v~A~n~~G~~---~~s~~~~~ 571 (591)
|++.|.|+|+|.| .|.| ++|.+..+
T Consensus 455 P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~ 482 (488)
T 2q7n_A 455 PYTAYTFRVRCSS-KTFWKWSRWSDEKRH 482 (488)
T ss_dssp SSCCBBCCEEEEE-SSCSSCCCCCCCCCB
T ss_pred CCceEEEEEEEEE-CCCCCCCCCcCCEeE
Confidence 9999999999999 8885 56655443
No 79
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.93 E-value=2.7e-23 Score=202.68 Aligned_cols=173 Identities=12% Similarity=0.203 Sum_probs=110.3
Q ss_pred CCeEEe-eccccceeccccEEEEEEEcCCCC--CeeEEecCCccCCCCCc-eEEE--EeCC---eEEEEEcceecccceE
Q psy12425 292 APEIIV-PLRNANAIQNHNAQFQCTITGCPK--PTISWLKGSREITPSAR-HHIF--AEGD---TYTLIINSVYGVDADE 362 (591)
Q Consensus 292 ~p~~~~-~~~~~~~~~g~~~~l~c~~~~~p~--~~v~W~~~~~~~~~~~~-~~~~--~~~~---~~~l~i~~~~~~d~g~ 362 (591)
+|.+.. .+....+..|+.+.|.|.+.|..+ ..|.|++++..+..... .... .++. ...|.|......|.|.
T Consensus 296 ~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~ 375 (512)
T 1zvo_C 296 PLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTS 375 (512)
T ss_pred CCEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCe
Confidence 455433 334445678999999999988633 48999999887652111 1111 1111 2368899999999999
Q ss_pred EEEEEEeCCcceeeeeEEEE------ecCCcccCCCCcccceeecCCCeEE-EEEeeeccCCC--eEEEeeCCeEeeecc
Q psy12425 363 YVCRAVNKGGVKSTKAELII------MTAPKFNVPPRFRDTAYFDKGENVV-VKIPFTGYPKP--KITWYRDNEVIESGG 433 (591)
Q Consensus 363 y~c~a~n~~g~~~~~~~l~v------~~~p~~~~~~~~~~~~~~~~g~~~~-l~c~~~~~p~~--~v~W~~~~~~~~~~~ 433 (591)
|+|.|.|..+... ...+.. ..+|.+...+.. ..|+.+. |.|.+.|.+++ .|.|+++|..+....
T Consensus 376 y~C~a~n~~~~~~-~~~~~~~~~~~~~~~p~v~~~~~~------~~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~ 448 (512)
T 1zvo_C 376 VTCTLNHPSLPPQ-RLMALREPAAQAPVKLSLNLLASS------DPPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSG 448 (512)
T ss_pred EEEEEEeCCCCCC-ceeEEeecCCCCCCCCEEEEEccC------cCCCCceEEEEEEeeeCCCCcEEEEEECCeECcCcc
Confidence 9999999877654 322322 123433221110 1688899 99999986543 689999999886542
Q ss_pred ce--EEEec-CC-----eeEEEEeccCCCcceeEEEEEEcCCCccc
Q psy12425 434 HF--HVETS-ER-----HAILTIRDASNVDTAPYRVVAENDLGMDS 471 (591)
Q Consensus 434 ~~--~~~~~-~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g~~~ 471 (591)
.. ..... +. .+.|.|.....++.|.|+|.|.|......
T Consensus 449 ~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~ 494 (512)
T 1zvo_C 449 FAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTL 494 (512)
T ss_pred ccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCCc
Confidence 11 11111 11 13466666666779999999999876543
No 80
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.93 E-value=4.2e-24 Score=195.65 Aligned_cols=275 Identities=15% Similarity=0.191 Sum_probs=175.4
Q ss_pred CceeeeecCCeEEEEEEeccCCCc-----eEEEEECCEE-------------eecCCceeEEEe-----CCeEEEEEccc
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPM-----EVSLTKNGRV-------------VQSDDRFKFTVL-----DDYIIIFIKEI 58 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~-----~v~W~~~~~~-------------~~~~~~~~~~~~-----~~~~~l~i~~~ 58 (591)
|..+.+..|++++|.|.+.+.+.+ .|.|+|++.. +....++++... ....+|.|.++
T Consensus 7 P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 86 (313)
T 4fqp_A 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGL 86 (313)
T ss_dssp CSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSC
T ss_pred CCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcC
Confidence 788999999999999999886655 4899998753 222233333211 12357999999
Q ss_pred CCCCceEEEEEEEc-CCeeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceE
Q psy12425 59 RKEDAGDYTVNLSN-SSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 137 (591)
Q Consensus 59 ~~~d~g~Y~c~~~n-~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~ 137 (591)
+.+|+|.|+|.+.+ ..|..+..+.|.+...|..+..+..
T Consensus 87 ~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~---------------------------------------- 126 (313)
T 4fqp_A 87 RVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQK---------------------------------------- 126 (313)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECC----------------------------------------
T ss_pred ChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccc----------------------------------------
Confidence 99999999998864 4555566676766554422110000
Q ss_pred EEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCC
Q psy12425 138 CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDG 217 (591)
Q Consensus 138 ~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~ 217 (591)
..+..+....+.|.+... .....+.|...
T Consensus 127 -------------~~~~~~~~~~~~C~~~~~----------------------------------~P~~~i~W~~~---- 155 (313)
T 4fqp_A 127 -------------VQLTGEPVPMARCVSTGG----------------------------------RPPAQITWHSD---- 155 (313)
T ss_dssp -------------BCCCSSCEEEEEEEEEEE----------------------------------BSCCEEEEEET----
T ss_pred -------------eEeecCceEEEEEEccCc----------------------------------cCCcEEEeecC----
Confidence 001122333455554311 01145788763
Q ss_pred CcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEe
Q psy12425 218 GSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV 297 (591)
Q Consensus 218 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~ 297 (591)
+..+.... .........+ . ....|.|......|.|.|+|.|.|..+.... ...+.+.. ..+|.+..
T Consensus 156 ~~~~~~~~-~~~~~~~~~~-~------~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~---~~~~~l~V---~~~P~v~~ 221 (313)
T 4fqp_A 156 LGGMPNTS-QVPGFLSGTV-T------VTSLWILVPSSQVDGKNVTCKVEHESFEKPQ---LLTVNLTV---YYPPEVSI 221 (313)
T ss_dssp TCCEEEEE-EEECSSTTCE-E------EEEEEEECCCGGGTTCEEEEEEECTTSSSCE---EEEEECCB---CEEEEEEE
T ss_pred Cccccccc-eeeeeccccc-c------cceeeeecccccccCeeEEEEEEccCcCccc---eeeeeccc---ccCCcccc
Confidence 22222110 0000011110 0 1135788888999999999999997765431 22222221 24566654
Q ss_pred ec-cccceeccccEEEEEEEcCCCCC-eeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCccee
Q psy12425 298 PL-RNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 375 (591)
Q Consensus 298 ~~-~~~~~~~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~ 375 (591)
.. ....+.+|+.+.|.|.+.|+|.| .|.|++++..+.... . ..+. +|.|.++...|+|.|+|.|.|..|...
T Consensus 222 ~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~---~-~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 295 (313)
T 4fqp_A 222 SGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA---V-AQGA--QLLIRPVDKPINTTLICNVTNALGARQ 295 (313)
T ss_dssp ECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---E-EETT--EEEECCCSSCCEEEEEEEEECSSCEEE
T ss_pred ccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce---E-EeCC--EEEECcCChhhCEEEEEEEEeCCCcEE
Confidence 33 34456678999999999999998 699999998876432 2 2233 799999999999999999999999999
Q ss_pred eeeEEEEecCCc
Q psy12425 376 TKAELIIMTAPK 387 (591)
Q Consensus 376 ~~~~l~v~~~p~ 387 (591)
..+.|.|.++|.
T Consensus 296 ~~~~l~V~~~PP 307 (313)
T 4fqp_A 296 AELTVQVKEGPP 307 (313)
T ss_dssp EEEEEEEECCC-
T ss_pred EEEEEEEEeCCC
Confidence 999999987653
No 81
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.93 E-value=2.6e-25 Score=204.63 Aligned_cols=265 Identities=15% Similarity=0.171 Sum_probs=188.3
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCC-CCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
..+|.+..+. +..+.+|+.+.|.|.+.+. |.+.+.|++++..+....++.+. .+...|.|.++..+|+|.|+|.|.
T Consensus 5 ~~~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~ 81 (317)
T 2y25_A 5 FTGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILK 81 (317)
T ss_dssp SSCCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEEEE
T ss_pred cCCCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccCeEEEEEEE
Confidence 3578877554 5788999999999999887 78999999999988766665543 344689999999999999999999
Q ss_pred eCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeec----------cCCCeEEEeeCCeEeeeccceEEE
Q psy12425 369 NKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG----------YPKPKITWYRDNEVIESGGHFHVE 438 (591)
Q Consensus 369 n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~----------~p~~~v~W~~~~~~~~~~~~~~~~ 438 (591)
|..|.......+.|...|.+...+ ....+..|..+.|.|.+.+ .|.+.+.|++++..+....++.+.
T Consensus 82 n~~g~~~~~~~l~v~~~~~~~~~~---~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 158 (317)
T 2y25_A 82 DDRGKDKSRLKLVDEAFKELMMEV---CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTG 158 (317)
T ss_dssp SSSCEEEEEECCSTHHHHHHHHHH---HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEE
T ss_pred CCCCcEEEEEEEEEecCccccccC---CceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEe
Confidence 999877666665555443322111 1223456777888887776 789999999999999887888887
Q ss_pred ecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecC-----------------CCCCCCCC-----eeeeecCC
Q psy12425 439 TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD-----------------RPDPPQFP-----TVEDIGHD 496 (591)
Q Consensus 439 ~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~-----------------~p~~p~~~-----~~~~~~~~ 496 (591)
..+....|.|.++...|.|.|+|.|.|..|.....+.+.+.. ....|..+ ......+.
T Consensus 159 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 238 (317)
T 2y25_A 159 VTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGK 238 (317)
T ss_dssp ECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTS
T ss_pred ccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCC
Confidence 777788899999999999999999999999888888776531 01111100 12233566
Q ss_pred eeEEEeeccccCCCcceeeEEEEeee---CCCCceEEece-eeeeEEEEcCcccCceEEEEEEEEcCCcCCC
Q psy12425 497 SLALVWRAPIWDGGSNITNYIVEKRE---HPMSSWIRVGN-TRFTTMAITGLSPGHQYEFRVYAENVYGRSD 564 (591)
Q Consensus 497 ~v~l~W~~p~~~~~~~~~~y~v~~~~---~~~~~~~~~~~-~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~ 564 (591)
.+.|.|..... +...+.+.... .....+..... .....+.|.++...+.+.|+|.|.|..|...
T Consensus 239 ~~~l~C~~~g~----p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 306 (317)
T 2y25_A 239 ALNLTCNVWGD----PPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSET 306 (317)
T ss_dssp BBCEEEEEECS----SCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEE
T ss_pred EEEEEEEEecC----CCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEE
Confidence 78888875321 11122222211 11222222222 4446899999999999999999999999653
No 82
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.93 E-value=8.7e-25 Score=201.44 Aligned_cols=222 Identities=14% Similarity=0.124 Sum_probs=163.7
Q ss_pred CceeeecCcccCCcE-EEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCC-CCe
Q psy12425 246 PSQINIPNLIEGRQY-EFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP-KPT 323 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~-~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p-~~~ 323 (591)
...|.|.++...|.| .|+|.|.|..|..... .....+. .+|.+........+.+|+.+.|.|.+.+.| .+.
T Consensus 88 ~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~--~~~~v~~-----~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~ 160 (329)
T 3oq3_B 88 NGDLWIANYTSNDSHRRYLCTVTTKNGDCVQG--IVRSHIR-----KPPSCIPETYELGTHDKYGIDLYCGILYAKHYNN 160 (329)
T ss_dssp TTEEEESSCCGGGGGCCEEEEEECTTSCEEEE--EEEEEEC-----CCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCE
T ss_pred cceEEEcCCChHhCCCcEEEEEEeCCCceeeE--EEEEEEc-----CCCcEeccccceEEeCCCcEEEEeccCCCCCCce
Confidence 578999999999999 9999999988753211 1112222 345455444455577899999999999999 899
Q ss_pred eEEecCCccCCCC-CceEEEEeCCeEEEEEcceecccceEEEEEEEeC--Ccceeee----eEEEEecCCcccCCCCccc
Q psy12425 324 ISWLKGSREITPS-ARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK--GGVKSTK----AELIIMTAPKFNVPPRFRD 396 (591)
Q Consensus 324 v~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~--~g~~~~~----~~l~v~~~p~~~~~~~~~~ 396 (591)
+.|++++..+... .++... . ..|.|.++..+|+|.|+|.|.|. .|..... +.|.|..+|....+.....
T Consensus 161 i~W~k~~~~l~~~~~~~~~~-~---~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~ 236 (329)
T 3oq3_B 161 ITWYKNNQELIIDGTKYSQS-G---QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDP 236 (329)
T ss_dssp EEEEETTEECCCSSSSEEEE-T---TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCS
T ss_pred EEEEECCccCCCCCceEecC-C---CEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCC
Confidence 9999999888533 333332 2 37999999999999999999997 6554333 6778877662211100123
Q ss_pred ceeecCCCeEEEEEeeeccC---CC-eEEEeeCCeEee-eccceEEE--ecC--CeeEEEEeccCCCcce-eEEEEEEcC
Q psy12425 397 TAYFDKGENVVVKIPFTGYP---KP-KITWYRDNEVIE-SGGHFHVE--TSE--RHAILTIRDASNVDTA-PYRVVAEND 466 (591)
Q Consensus 397 ~~~~~~g~~~~l~c~~~~~p---~~-~v~W~~~~~~~~-~~~~~~~~--~~~--~~~~l~i~~~~~~~~g-~y~c~a~n~ 466 (591)
...+..|+.+.|.|.+.|.| .+ .+.|+++|..+. .+...... ... ....|.|.++..+|.| .|+|.|.|.
T Consensus 237 ~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~ 316 (329)
T 3oq3_B 237 KINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNY 316 (329)
T ss_dssp EEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECS
T ss_pred eeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEec
Confidence 35678999999999999998 77 899999998743 22222111 111 4678999999999999 999999999
Q ss_pred CCccceEEEEEe
Q psy12425 467 LGMDSAIVKIQI 478 (591)
Q Consensus 467 ~g~~~~~~~~~v 478 (591)
.|.....+.|.+
T Consensus 317 ~G~~~~~~~l~v 328 (329)
T 3oq3_B 317 YFDKTLTTTVVL 328 (329)
T ss_dssp SCEEEEEEEEEE
T ss_pred CCceEEEEEEEe
Confidence 999988888776
No 83
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.93 E-value=3.1e-24 Score=195.79 Aligned_cols=262 Identities=16% Similarity=0.144 Sum_probs=173.9
Q ss_pred cccceeccccEEEEEEEcCC-----CCCeeEEecCCccCCCCCceEEEEeCC-eEEEEEcceecccceEEEEEEEeCCcc
Q psy12425 300 RNANAIQNHNAQFQCTITGC-----PKPTISWLKGSREITPSARHHIFAEGD-TYTLIINSVYGVDADEYVCRAVNKGGV 373 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~-----p~~~v~W~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~c~a~n~~g~ 373 (591)
.+..+..|+.++|.|.+.+. |.+.+.|.+++..+... ++....++. ...|+|.++...|+|.|.|.+.+..+.
T Consensus 8 ~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~ 86 (313)
T 2d9q_B 8 SAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQ 86 (313)
T ss_dssp SCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEE
T ss_pred CCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEEEecCeEEEEEEEeccCCCccceEEeeecCCCce
Confidence 45667899999999999987 57899999999877543 222222332 268999999999999999998665444
Q ss_pred eeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeecc-CCCeEEEeeCCeEeeeccceEEEe-------------
Q psy12425 374 KSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKPKITWYRDNEVIESGGHFHVET------------- 439 (591)
Q Consensus 374 ~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~------------- 439 (591)
....+.|.+..+|.. ...|.|...+. ....+.|........ ...|.+..
T Consensus 87 ~~~~~~l~v~~~P~~----------------P~~l~c~~~~~~~~~~~~W~~~~~~~~-~~~Y~l~~~~~~~~~~~~~~~ 149 (313)
T 2d9q_B 87 ILDQVELRAGYPPAI----------------PHNLSCLMNLTTSSLICQWEPGPETHL-PTSFTLKSFKSRGNCQTQGDS 149 (313)
T ss_dssp EEEEEEEEECCCCCC----------------CEEEEEEEETTTTEEEEEEECCSCCSS-CCEEEEEEEECCTTSCSCCCC
T ss_pred eEEEEEEccCCCCCC----------------CccceeeECCCCccEEEEecCCCCCCC-ceeEEEEEEecCCCcccCCcc
Confidence 444566666655432 23444554432 234455543221000 01111110
Q ss_pred ------cCCeeEEEEe--ccCCCcceeEEEEEEcCCCccc-eEEEEEec--CCCCCCCCCeeeee------cCCeeEEEe
Q psy12425 440 ------SERHAILTIR--DASNVDTAPYRVVAENDLGMDS-AIVKIQIS--DRPDPPQFPTVEDI------GHDSLALVW 502 (591)
Q Consensus 440 ------~~~~~~l~i~--~~~~~~~g~y~c~a~n~~g~~~-~~~~~~v~--~~p~~p~~~~~~~~------~~~~v~l~W 502 (591)
........+. ++.+...|.++|.|.|..|... ....+... .+|.+|.++.+... ..+++.|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W 229 (313)
T 2d9q_B 150 ILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSW 229 (313)
T ss_dssp EEEECCCTTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEE
T ss_pred cccCCCCCCCcEEEECccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEE
Confidence 1122344554 4889999999999999999862 23334333 36889988877765 468999999
Q ss_pred eccccCCCcceeeEEEEee-eCCCCceEEec--eeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcc--eEEeccc
Q psy12425 503 RAPIWDGGSNITNYIVEKR-EHPMSSWIRVG--NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSD--LITTYGE 577 (591)
Q Consensus 503 ~~p~~~~~~~~~~y~v~~~-~~~~~~~~~~~--~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~--~~~t~~~ 577 (591)
++|.. ++..+.+|+|+|+ ......|..+. ......+.|.+|.|++.|.|+|+|.|..|.|.+|..+. .++|.+.
T Consensus 230 ~~p~~-~~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 230 EPWQP-GLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp ECCGG-GTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred CCCCC-CCceeEEEEEEEccCCCCCCcEEcccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 98864 4445689999999 66677888652 33457899999999999999999999999887665543 3456655
Q ss_pred ccc
Q psy12425 578 LLS 580 (591)
Q Consensus 578 ~p~ 580 (591)
+|.
T Consensus 309 ~P~ 311 (313)
T 2d9q_B 309 AAA 311 (313)
T ss_dssp ---
T ss_pred CCC
Confidence 554
No 84
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.93 E-value=9.4e-25 Score=200.01 Aligned_cols=222 Identities=16% Similarity=0.224 Sum_probs=163.3
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEc-CCCCCee
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTI 324 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~-~~p~~~v 324 (591)
..+|.|.+++..|+|.|+|.+.+..+... .....+.+ ..+|.+........+..++.+.+.|.+. +.|.+.+
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~--~~~~~l~v-----~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i 150 (313)
T 4fqp_A 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSR--SVDIWLRV-----LAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQI 150 (313)
T ss_dssp BCCEEECSCCGGGCEEEEEEEECSSSCEE--EEEEEECC-----BBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEE
T ss_pred ceEEEECcCChhhCEEEEEEEeeccCcce--eeeeeeee-----ccCCcceecccceEeecCceEEEEEEccCccCCcEE
Confidence 35799999999999999999865432211 12222322 2456666666667778889999999874 7899999
Q ss_pred EEecCCccCCCCCceEEEEeCC---eEEEEEcceecccceEEEEEEEeCCccee--eeeEEEEecCCcccCCCCccccee
Q psy12425 325 SWLKGSREITPSARHHIFAEGD---TYTLIINSVYGVDADEYVCRAVNKGGVKS--TKAELIIMTAPKFNVPPRFRDTAY 399 (591)
Q Consensus 325 ~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~c~a~n~~g~~~--~~~~l~v~~~p~~~~~~~~~~~~~ 399 (591)
.|++++..+..........++. ...|.|.+...+|.|.|+|.|.|..+... ....|.|..+|.+...+. ....
T Consensus 151 ~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~--~~~~ 228 (313)
T 4fqp_A 151 TWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGY--DNNW 228 (313)
T ss_dssp EEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECC--CSCE
T ss_pred EeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccc--ccee
Confidence 9999887664322221111221 12588999999999999999999877654 445666777776643322 2334
Q ss_pred ecCCCeEEEEEeeeccCCC-eEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEe
Q psy12425 400 FDKGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 478 (591)
Q Consensus 400 ~~~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v 478 (591)
+..|+.+.|.|.+.|.|.| .|.|+++|..+.... .. ....|.|.++...|+|.|+|.|.|..|..+..+.|.|
T Consensus 229 ~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~---~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 302 (313)
T 4fqp_A 229 YLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA---VA---QGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQV 302 (313)
T ss_dssp ETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---EE---ETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEE
T ss_pred ecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce---EE---eCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEE
Confidence 5678999999999999999 699999998775432 11 2357999999999999999999999999999999999
Q ss_pred cCCC
Q psy12425 479 SDRP 482 (591)
Q Consensus 479 ~~~p 482 (591)
..+|
T Consensus 303 ~~~P 306 (313)
T 4fqp_A 303 KEGP 306 (313)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 8754
No 85
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.92 E-value=1.3e-23 Score=180.59 Aligned_cols=176 Identities=20% Similarity=0.302 Sum_probs=152.1
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecC--CceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD--DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~ 79 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|+|..+... .++++...+...+|.|.+++.+|.|.|+|.|.|..|....
T Consensus 25 p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 104 (215)
T 3mtr_A 25 PVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESL 104 (215)
T ss_dssp CSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEE
T ss_pred CceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEE
Confidence 56788999999999999999999999999999999776 4566666667789999999999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeec----CcceEEEcCCcC
Q psy12425 80 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTC----HDTTFIVQGLTE 155 (591)
Q Consensus 80 ~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~----~~~~~~i~~l~~ 155 (591)
.+.|.|...|.+|.. +.+ .....++.|.|.+|..+++.++..|.+++...+...|....... ....+.|.+|.+
T Consensus 105 ~~~l~v~~~P~~p~~-~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~ 182 (215)
T 3mtr_A 105 EFILVQADTPSSPSI-DQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKP 182 (215)
T ss_dssp EEEEEECCCCCCCEE-EEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCT
T ss_pred EEEEEECCCCCCCcc-eEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCC
Confidence 999999999988865 333 45678899999988878888999999999998888888765422 237899999999
Q ss_pred CcEEEEEEEEEccCCCCCCCCccC
Q psy12425 156 GQEYLFHVMAVNENGMGPPLEGIN 179 (591)
Q Consensus 156 ~~~y~~~~~a~n~~g~~~~~~~~~ 179 (591)
++.|.|+|.|.|..|.+..+....
T Consensus 183 ~~~y~~~~~A~N~~G~s~~S~~~~ 206 (215)
T 3mtr_A 183 ETTYAVRLAALNGKGLGEISAASE 206 (215)
T ss_dssp TCEEEEEEEEEESSCBCCCCCCEE
T ss_pred CCEEEEEEEEEeCCcccCccccee
Confidence 999999999999999988875543
No 86
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.92 E-value=9.5e-24 Score=181.16 Aligned_cols=190 Identities=26% Similarity=0.456 Sum_probs=152.5
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCC-CCCceEEEEe-CCeEEEEEcceec-ccceEEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT-PSARHHIFAE-GDTYTLIINSVYG-VDADEYVCR 366 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~-~~~~~~~~~~-~~~~~l~i~~~~~-~d~g~y~c~ 366 (591)
..+|.+...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+... ++..+|.|.++.. .|+|.|+|.
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 468899988888999999999999999999999999999998886 4456665543 4457999999999 999999999
Q ss_pred EEeCCcc-eeeeeEEEEecCC-------cccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeec-cceEE
Q psy12425 367 AVNKGGV-KSTKAELIIMTAP-------KFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESG-GHFHV 437 (591)
Q Consensus 367 a~n~~g~-~~~~~~l~v~~~p-------~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~-~~~~~ 437 (591)
|.|..|. ......|.|...+ .+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+... ..+.+
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~---~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~ 160 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGP---GTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSL 160 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECC---CCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEE
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCC---CceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEc
Confidence 9999998 6778888888763 333222 2345678999999999999999999999999988653 33333
Q ss_pred EecCCeeEEEEeccCCCcceeEEEEEEcCCCccce-EEEEEecCCCCCCC
Q psy12425 438 ETSERHAILTIRDASNVDTAPYRVVAENDLGMDSA-IVKIQISDRPDPPQ 486 (591)
Q Consensus 438 ~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~-~~~~~v~~~p~~p~ 486 (591)
. ...|.|.++...|.|.|+|.|.|..|.... .+.|.|...+..+.
T Consensus 161 ~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~~~ 206 (212)
T 2yd1_A 161 K----DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRVGTK 206 (212)
T ss_dssp E----TTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C--
T ss_pred c----CCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecccccc
Confidence 2 348999999999999999999999999865 48888887765543
No 87
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.92 E-value=7.4e-25 Score=200.41 Aligned_cols=277 Identities=14% Similarity=0.143 Sum_probs=176.1
Q ss_pred CCceeeeecCCeEEEEEEecc-CCCceEEEEECCEEe---------------ecC--CceeEEE-eCCeEEEEEcccCCC
Q psy12425 1 MPNALYIPEGDNTKVKIFYAG-DQPMEVSLTKNGRVV---------------QSD--DRFKFTV-LDDYIIIFIKEIRKE 61 (591)
Q Consensus 1 ~p~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~~~~~---------------~~~--~~~~~~~-~~~~~~l~i~~~~~~ 61 (591)
+|..+++.+|++++|.|.+.+ .+.+.|+|+|++... ... .|..+.. .....+|.|.+++.+
T Consensus 5 v~p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 84 (308)
T 4fom_A 5 VEPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFS 84 (308)
T ss_dssp CCCSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGG
T ss_pred cCCEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHH
Confidence 467899999999999999875 455689999965321 111 1222111 123357999999999
Q ss_pred CceEEEEEEEcC-CeeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEE
Q psy12425 62 DAGDYTVNLSNS-SGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIS 140 (591)
Q Consensus 62 d~g~Y~c~~~n~-~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~ 140 (591)
|+|.|+|.|.|. .|..+..+.+.+...|..+... .+. .+
T Consensus 85 D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~----------------~~~-----~~------------------- 124 (308)
T 4fom_A 85 DSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIK----------------GPD-----SL------------------- 124 (308)
T ss_dssp GCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEE----------------CSS-----CC-------------------
T ss_pred HCEEEEEEEeeCCCcceeeeeEEEeeecccccccc----------------ccc-----ee-------------------
Confidence 999999999886 5666677777777654322110 000 00
Q ss_pred eecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcc
Q psy12425 141 TTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSR 220 (591)
Q Consensus 141 ~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~ 220 (591)
-...+....+.|.+... .....++|... +..
T Consensus 125 -----------~~~~~~~~~l~C~~~~g----------------------------------~P~~~i~W~~~----~~~ 155 (308)
T 4fom_A 125 -----------IDGGNETVAAICIAATG----------------------------------KPVAHIDWEGD----LGE 155 (308)
T ss_dssp -----------CTTCSCEEEEEEEEEEE----------------------------------BSCCEEEECCC----SSB
T ss_pred -----------EEcCCceEEEEEEecCC----------------------------------cCCceEEEEEC----Ccc
Confidence 01123344556654311 01145788763 222
Q ss_pred eEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeec-
Q psy12425 221 IQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL- 299 (591)
Q Consensus 221 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~- 299 (591)
+....... ..... .....|.|..+...|.|.|+|.|.|..|.... ...+.+.. ..+|.+...+
T Consensus 156 ~~~~~~~~---~~~~~-------~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~---~~~~~l~V---~~~P~~~~~~~ 219 (308)
T 4fom_A 156 MESTTTSF---PNETA-------TIISQYKLFPTRFARGRRITCVVKHPALEKDI---RYSFILDI---QYAPEVSVTGY 219 (308)
T ss_dssp CCEEEEEC---TTSCE-------EEEEEEEECCCGGGTTCEEEEEEECTTCSSCE---EEEEECCC---CEEEEECCBCC
T ss_pred ccccccee---eeecc-------cccccceEEeeeecCCccEEEEEEccCCCCce---EEeEEEEE---ecCCeeEEccc
Confidence 21111000 00000 01246889999999999999999998765432 22222221 2345554433
Q ss_pred cccceeccccEEEEEEEcCCCCC-eeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeee
Q psy12425 300 RNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 378 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~ 378 (591)
....+.+|+.+.|.|.+.|.|.| .+.|++++..+...... .+...|.|.++..+|+|.|+|.|.|..|..+..+
T Consensus 220 ~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~-----~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~ 294 (308)
T 4fom_A 220 DGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLA-----SDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQK 294 (308)
T ss_dssp CSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBC-----STTEEECCSCCCSCCCSEEEEEEEETTEEEEEEE
T ss_pred ceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEEE-----cCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEE
Confidence 33456678999999999999988 69999998877543211 1234577889999999999999999999999999
Q ss_pred EEEEecCCc
Q psy12425 379 ELIIMTAPK 387 (591)
Q Consensus 379 ~l~v~~~p~ 387 (591)
.|.|.++|.
T Consensus 295 ~l~V~~~P~ 303 (308)
T 4fom_A 295 VIYISDPPH 303 (308)
T ss_dssp ECCEECCC-
T ss_pred EEEEEcCCC
Confidence 999998775
No 88
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.92 E-value=8.8e-24 Score=181.28 Aligned_cols=189 Identities=23% Similarity=0.405 Sum_probs=150.8
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEE-eCCeEEEEEcce-ecccceEEEEEEE
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFA-EGDTYTLIINSV-YGVDADEYVCRAV 368 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~-~~~d~g~y~c~a~ 368 (591)
.+|.+...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+.......... .+....|.|.++ ..+|+|.|+|.|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~ 84 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVAS 84 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEE
Confidence 57888888888889999999999999999999999999998887654433332 335668999999 4999999999999
Q ss_pred eCCcceeeeeEEEEecCCc-------ccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeec---cceEEE
Q psy12425 369 NKGGVKSTKAELIIMTAPK-------FNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESG---GHFHVE 438 (591)
Q Consensus 369 n~~g~~~~~~~l~v~~~p~-------~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~---~~~~~~ 438 (591)
|..|.......|.|...+. +...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+... .++...
T Consensus 85 n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~---~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~ 161 (212)
T 2yd6_A 85 NNVGEISVSTRLTVLREDQIPRGFPTIDMGP---QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQL 161 (212)
T ss_dssp ETTEEEEEEEEEEEECGGGCCTTCCEEEECC---CCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEE
T ss_pred cCCCcEEEEEEEEEeccCccCCCcceeecCC---cceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEE
Confidence 9999988888898887532 22222 2345678999999999999999999999999988653 345555
Q ss_pred ecCCeeEEEEeccCCCcceeEEEEEEcCCCcc-ceEEEEEecCCC
Q psy12425 439 TSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQISDRP 482 (591)
Q Consensus 439 ~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p 482 (591)
.......|.|.++..+|.|.|+|.|.|..|.. +..+.+.+..+|
T Consensus 162 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 162 RSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp EETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 55667999999999999999999999999987 455666665443
No 89
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.92 E-value=5.8e-24 Score=179.98 Aligned_cols=178 Identities=16% Similarity=0.290 Sum_probs=138.5
Q ss_pred CCeEEeeccccceeccccEEEEEEEcC-CCCCeeEEecCCccCCCCCceEEEEeC--CeEEEEEcceecccceEEEEEEE
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITG-CPKPTISWLKGSREITPSARHHIFAEG--DTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
+|.+.... +..+.+|+.+.|.|.+.+ .|.|.+.|++++..+..+.++.+..++ +..+|.|.++..+|+|.|+|.|.
T Consensus 3 ~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 35555443 567899999999999964 799999999999999888888877665 56789999999999999999999
Q ss_pred eCCcceeeeeEEEEe---------------------cCCcccCCCCcccceeecCCCeEEEEEeeecc-CCCeEEEeeCC
Q psy12425 369 NKGGVKSTKAELIIM---------------------TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKPKITWYRDN 426 (591)
Q Consensus 369 n~~g~~~~~~~l~v~---------------------~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~~v~W~~~~ 426 (591)
| |.......+.+. .+|.+..++ ...+.+|..+.|.|.+.|. |.|.+.|+++|
T Consensus 82 N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~----~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g 155 (207)
T 3rbs_A 82 D--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL----SWEVTGECNVLLKCKVANIKKETHIVWYKDE 155 (207)
T ss_dssp E--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE----EEEEETTTEEEEEEEEESCCTTCEEEEEETT
T ss_pred C--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC----CcEEcCCCcEEEEEEEeCCCCCCEEEEEECC
Confidence 9 444443333321 123222111 2456889999999999999 99999999999
Q ss_pred eEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEe
Q psy12425 427 EVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 478 (591)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v 478 (591)
..+....++ ........|.|.++..+|+|.|+|.|.|..|....++.|..
T Consensus 156 ~~l~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 156 REISVDEKH--DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp EEECCCCCC--CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred EECCCCCce--EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 998765543 22344568999999999999999999999999988887765
No 90
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.92 E-value=6.8e-23 Score=187.61 Aligned_cols=267 Identities=15% Similarity=0.147 Sum_probs=190.8
Q ss_pred eeeecCCeEEEEEEeccCC-CceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEEE
Q psy12425 5 LYIPEGDNTKVKIFYAGDQ-PMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTI 83 (591)
Q Consensus 5 ~~v~~G~~~~l~C~~~~~p-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~l 83 (591)
+.+.+|++|+|.|.+.+.+ .+.|.|++++..+... ..+....+ ..|.|.+++..|+|.|+|. ..|.....+.|
T Consensus 16 v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~-~~~~~~~~--~~L~i~~v~~~d~G~Y~C~---~~g~~~~~~~L 89 (325)
T 1n26_A 16 LTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSH-PSRWAGMG--RRLLLRSVQLHDSGNYSCY---RAGRPAGTVHL 89 (325)
T ss_dssp EEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCC-CEEEEEES--SEEEECSCCGGGCEEEEEE---SSSSCSCEEEE
T ss_pred EECCCCCcEEEEeCCCCCCCCceEEEEECCccCCcc-cccccccc--ceEEecccchhhCeEeEEE---eCCEEeeeEEE
Confidence 4448999999999998754 7899999988765222 22332222 4799999999999999999 36777788999
Q ss_pred EEecCCCCCCCCcceE-EecCceEEEEecCCCCCCCcceeeEEEEEEecC---CCce-EEEEe--ecCcceEEEcCCc-C
Q psy12425 84 NITGLPGPPIGPLDVS-EITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS---MPHW-ICIST--TCHDTTFIVQGLT-E 155 (591)
Q Consensus 84 ~v~~~p~~p~~~~~~~-~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~---~~~~-~~~~~--~~~~~~~~i~~l~-~ 155 (591)
.|..+|..|. +... .....++.+.|.++.+ ++ ....|.+.++... ...| ..+.. ......+.+..+. +
T Consensus 90 ~V~~pP~~P~--l~c~~~~~~~~~~c~W~~~~~-~~-~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~~ 165 (325)
T 1n26_A 90 LVDVPPEEPQ--LSCFRKSPLSNVVCEWGPRST-PS-LTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGD 165 (325)
T ss_dssp EECCCCCCCC--CEEEBSSTTSCEEEEECCSSC-CC-TTCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEEECCCTTC
T ss_pred EeccCCCCCc--eeEEeecCCCcEEEEECCCCC-CC-CCceEEEEEEEccCCCCCcccccCCCCCCCCCEEEEECCCccc
Confidence 9999888776 4443 2235689999997653 33 3467888776532 1122 23322 2334567787765 6
Q ss_pred CcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecC--CeEEEEEecCCCC-CCcceEEEEEEeeecC
Q psy12425 156 GQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGG--DFVNLSWDKPLDD-GGSRIQGYWIDKHEVG 232 (591)
Q Consensus 156 ~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~v~l~w~~~~~~-~~~~~~~y~~~~~~~~ 232 (591)
...|.|+|.|.|..|.+..... . ........|.+|..+.+....+ .++.|+|.+|... .+..+..|.|+++..+
T Consensus 166 ~~~Y~f~v~A~N~~G~~~s~~~-~--~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~ 242 (325)
T 1n26_A 166 SSFYIVSMCVASSVGSKFSKTQ-T--FQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAER 242 (325)
T ss_dssp CCEEEEEEEEEETTEEEECCCE-E--EETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETT
T ss_pred CcEEEEEEEEEcCCCCcccCcE-E--EeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCC
Confidence 7999999999999997532111 1 0111223567777777766543 5899999998653 3446799999999988
Q ss_pred CCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEc
Q psy12425 233 SDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 285 (591)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~ 285 (591)
...|...... .....+.|.+|.++..|.|+++|.|..|.+.++..+..+...
T Consensus 243 ~~~W~~~~~~-~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~ 294 (325)
T 1n26_A 243 SKTFTTWMVK-DLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGT 294 (325)
T ss_dssp CSCCEEEECG-GGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEEC
T ss_pred CCCCEEEccc-CCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCcccee
Confidence 8889876543 345788999999999999999999999988888777666654
No 91
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.92 E-value=1.7e-23 Score=189.70 Aligned_cols=269 Identities=14% Similarity=0.124 Sum_probs=174.4
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.+ .+.|++++... ..........+|.|.+++.+|+|.|+|.+.|..|..+..+
T Consensus 11 ~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 81 (289)
T 3ejj_X 11 GPELVVEPGETVTLRCVSNG----SVEWDGPISPY-----WTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTI 81 (289)
T ss_dssp SSEEEECTTCCEEEEEECSS----CCEEECSCSSS-----SEECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEE
T ss_pred CceEEECCCCCEEEEEEeCC----cEEEccCCCce-----EEEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEE
Confidence 56788999999999999987 49999876421 2222334456899999999999999999999988888888
Q ss_pred EEEEecCCCCCCC-CcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEE
Q psy12425 82 TINITGLPGPPIG-PLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 160 (591)
Q Consensus 82 ~l~v~~~p~~p~~-~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 160 (591)
.|.|...|.+... +...... .+....
T Consensus 82 ~l~V~~~~~~~~~~~~~~~v~-----------------------------------------------------~g~~v~ 108 (289)
T 3ejj_X 82 HLYVKDPAHSWNLLAQEVTVV-----------------------------------------------------EGQEAV 108 (289)
T ss_dssp EEEECCSSCSEEESCSEEEEE-----------------------------------------------------TTSCEE
T ss_pred EEEEeCCCcceecccceEEEe-----------------------------------------------------cCCceE
Confidence 8988875543111 0011111 333444
Q ss_pred EEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEE
Q psy12425 161 FHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN 240 (591)
Q Consensus 161 ~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 240 (591)
+.|.+... . ....+.|... ++..+ .......
T Consensus 109 L~C~~~~~-----~-----------------------------~~~~v~W~~~---~~~~~----------~~~~~~~-- 139 (289)
T 3ejj_X 109 LPCLITDP-----A-----------------------------LKDSVSLMRE---GGRQV----------LRKTVYF-- 139 (289)
T ss_dssp ECEEESCG-----G-----------------------------GGGSEEEEEG---GGEEC----------CTTCCEE--
T ss_pred eEEEccCC-----C-----------------------------cceEEEEEec---CCeec----------CCCccEE--
Confidence 55554310 0 0011455421 00000 0000001
Q ss_pred eeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcC-C
Q psy12425 241 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITG-C 319 (591)
Q Consensus 241 ~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~ 319 (591)
......|.|.++...|.|.|+|.|.+..+.. ......+.+... ...+|.+...+....+.+|+.+.|.|.+.+ .
T Consensus 140 --~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~--~~~~~~l~V~~~-~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~ 214 (289)
T 3ejj_X 140 --FSPWRGFIIRKAKVLDSNTYVCKTMVNGRES--TSTGIWLKVNRV-HPEPPQIKLEPSKLVRIRGEAAQIVCSATNAE 214 (289)
T ss_dssp --EETTTEEEESSCCGGGCEEEEEEEEETTEEE--ECCCEEEEEESS-CCCCCEEEEESSSEECCSSSCEEEEEEEEESS
T ss_pred --ECCCCCEEEeecccccCEEEEEEEEeCCCcc--ccccEEEEEEEC-CCCCCeEEecCCceEEEeCCcEEEEEEeCCCC
Confidence 1234569999999999999999999432211 123445555421 135788888777777789999999999988 7
Q ss_pred CCCeeEEecCCccCCCCCceEEEE--eCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCC
Q psy12425 320 PKPTISWLKGSREITPSARHHIFA--EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAP 386 (591)
Q Consensus 320 p~~~v~W~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p 386 (591)
|.+.+.|++++..+.......... .....+|.|.++..+|.|.|+|.|.|..|....++.|.+..++
T Consensus 215 p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 215 VGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp SCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred CceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 999999999998876543222110 0113489999999999999999999999999999888886654
No 92
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.92 E-value=1.1e-23 Score=193.26 Aligned_cols=258 Identities=15% Similarity=0.146 Sum_probs=180.1
Q ss_pred cceeccccEEEEEEEc-CCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEE
Q psy12425 302 ANAIQNHNAQFQCTIT-GCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 380 (591)
Q Consensus 302 ~~~~~g~~~~l~c~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l 380 (591)
+.+.+|+.+.|.|... +.|.+.+.|++++..+....++.+...+...+|.|.++..+|+|.|+|.|.|..|... +..+
T Consensus 11 ~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l 89 (312)
T 2y23_A 11 VNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLI 89 (312)
T ss_dssp EEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEE
T ss_pred EEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEE
Confidence 4477899999999885 6889999999999999888899888888888999999999999999999999888544 4555
Q ss_pred EEec------------CCcccCCCCcccceeecCCCeEEEEEeee-ccCCCeEEEeeCCeEeeeccceEEEec--CCeeE
Q psy12425 381 IIMT------------APKFNVPPRFRDTAYFDKGENVVVKIPFT-GYPKPKITWYRDNEVIESGGHFHVETS--ERHAI 445 (591)
Q Consensus 381 ~v~~------------~p~~~~~~~~~~~~~~~~g~~~~l~c~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~~~ 445 (591)
.+.. +|.+...+. ....+..|+.+.|.|.+. +.|.+.+.|++++..+....++.+... .....
T Consensus 90 ~v~~~~~~~~~~~~~~~p~~~~~~~--~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~ 167 (312)
T 2y23_A 90 DEEELKRLLALSHEHKFPTVPVKSE--LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE 167 (312)
T ss_dssp CHHHHHHHHHHHHHHHSCBCCEEEE--EEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEE
T ss_pred EEeeeeeeecccccCCCCccccccC--CceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEE
Confidence 5543 444332211 245678999999999998 899999999999999988777766654 45677
Q ss_pred EEEeccCCCcceeEEEEEEcCCCccceEEEEEec----------------CCCCCCCC---CeeeeecCCeeEEEeeccc
Q psy12425 446 LTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS----------------DRPDPPQF---PTVEDIGHDSLALVWRAPI 506 (591)
Q Consensus 446 l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~----------------~~p~~p~~---~~~~~~~~~~v~l~W~~p~ 506 (591)
|.|.++..+|+|.|+|.|.|..+.......+... ....+|.. +......+..+.|.|....
T Consensus 168 L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~ 247 (312)
T 2y23_A 168 MFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVAN 247 (312)
T ss_dssp EEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEES
T ss_pred EEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcC
Confidence 9999999999999999998765544333333100 00011221 1123345678889988632
Q ss_pred cCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCC
Q psy12425 507 WDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSD 564 (591)
Q Consensus 507 ~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~ 564 (591)
......+.+|+-............ ......|.|.++...+.+.|+|.|.|.+|...
T Consensus 248 ~p~~~~v~W~~~g~~~~~~~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~ 303 (312)
T 2y23_A 248 IKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEFSKKDAGIYEVILKDDRGKDK 303 (312)
T ss_dssp CCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEE
T ss_pred CCCCCEEEEeeCCEECCCCCcEEE--ECCEEEEEECcCCHHHCEEEEEEEEcCCCcee
Confidence 111112222210000000001111 12346999999999999999999999999643
No 93
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.92 E-value=4.4e-23 Score=173.64 Aligned_cols=178 Identities=21% Similarity=0.352 Sum_probs=147.9
Q ss_pred CCeEEeeccccceec-cccEEEEEEEcCCCC--CeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEE
Q psy12425 292 APEIIVPLRNANAIQ-NHNAQFQCTITGCPK--PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~-g~~~~l~c~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
+|.+... ....+.+ |+.+.|.|.+.+.|. +.+.|++++..+....... ....|.|.++..+|+|.|+|.|.
T Consensus 3 ~P~i~~~-~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~ 76 (190)
T 2wv3_A 3 EPRIVTS-EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVYH 76 (190)
T ss_dssp CCEEEEC-CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCccccc-ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEEE
Confidence 5666654 3444556 999999999998887 8899999998887654332 34589999999999999999999
Q ss_pred eCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEee--CCeEee---eccceEEEecCCe
Q psy12425 369 NKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYR--DNEVIE---SGGHFHVETSERH 443 (591)
Q Consensus 369 n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~--~~~~~~---~~~~~~~~~~~~~ 443 (591)
|. |.......|.|..+|.+...+ ....+..|+.+.|.|.+.|.|.|.+.|++ ++..+. ...++.+...+..
T Consensus 77 n~-~~~~~~~~l~V~~~p~~~~~~---~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~ 152 (190)
T 2wv3_A 77 FV-SAPKANATIEVKAAPDITGHK---RSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENY 152 (190)
T ss_dssp ET-TEEEEEEEEEEECCCEEEEEC---SEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSE
T ss_pred eC-CcccccEEEEEecCCcccccC---CcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCe
Confidence 99 888888999999988876543 23457899999999999999999999999 777664 4556777766777
Q ss_pred eEEEEeccC-CCcceeEEEEEEcCCCccceEEEEEec
Q psy12425 444 AILTIRDAS-NVDTAPYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 444 ~~l~i~~~~-~~~~g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
..|.|.++. .+|.|.|+|.|.|..|.....+.|.|.
T Consensus 153 ~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 153 TELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 899999999 799999999999999999888888764
No 94
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.92 E-value=3e-24 Score=180.38 Aligned_cols=169 Identities=15% Similarity=0.238 Sum_probs=131.5
Q ss_pred ccceeccccEEEEEE---EcCCCCCeeEEecCCccCCC-----------------CCceEEEEeCCeEEEEEcceecccc
Q psy12425 301 NANAIQNHNAQFQCT---ITGCPKPTISWLKGSREITP-----------------SARHHIFAEGDTYTLIINSVYGVDA 360 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~---~~~~p~~~v~W~~~~~~~~~-----------------~~~~~~~~~~~~~~l~i~~~~~~d~ 360 (591)
++++..|+.+.|.|. +.+.|.+.|.|++++..... ..++.+...++.++|.|.++..+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 466889999999995 56789999999997654321 1234455666778999999999999
Q ss_pred eEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEee----eccceE
Q psy12425 361 DEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIE----SGGHFH 436 (591)
Q Consensus 361 g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~----~~~~~~ 436 (591)
|.|+|.|.|..|.......|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.|.|++++..+. ...++.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~---~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~ 158 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSVHS---ERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVM 158 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEEEE---EECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCE
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeeecc---eeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEE
Confidence 99999999999999999999998877765443 33456789999999999999999999998765442 234455
Q ss_pred EEecCCeeEEEEeccCCCcceeEEEEEEcCCCccce
Q psy12425 437 VETSERHAILTIRDASNVDTAPYRVVAENDLGMDSA 472 (591)
Q Consensus 437 ~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~ 472 (591)
+..++....+.+.++..+|.|.|+|.|.|..|....
T Consensus 159 ~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 159 KEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp ECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred EeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 555555567778899999999999999999998754
No 95
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.92 E-value=1.5e-23 Score=192.24 Aligned_cols=265 Identities=11% Similarity=0.055 Sum_probs=163.9
Q ss_pred EeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCC-
Q psy12425 199 TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS- 277 (591)
Q Consensus 199 ~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~- 277 (591)
....|..++|.|..... ...+.+| ..+...... .........|.|.++...|.|.|+|.|.|..+....+.
T Consensus 34 ~v~~G~~v~L~C~~~~~--~~~~~W~-----k~g~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~ 105 (316)
T 3vh8_G 34 VVPRGGHVTLRCHYRHR--FNNFMLY-----KEDRIHIPI-FHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAP 105 (316)
T ss_dssp EEETTSCEEEEEEBTTB--CCSEEEE-----ESSCSSSCH-HHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCC
T ss_pred ccCCCCCEEEEEEccCC--CceEEEE-----eCCCcccee-ecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecC
Confidence 34578899999998533 1122222 111111000 00112356899999999999999999987543322222
Q ss_pred -CcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEE-eCCeEEEEEcce
Q psy12425 278 -ASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFA-EGDTYTLIINSV 355 (591)
Q Consensus 278 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~ 355 (591)
....+.+.. ...+|.+...+... +.+|+.+.|.|.+.+ +.+.+.|++++..+.......... ......|.|.++
T Consensus 106 s~~~~l~V~~--~~~~p~~~~~~~~~-v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v 181 (316)
T 3vh8_G 106 SNPVVIMVTG--NHRKPSLLAHPGPL-VKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPM 181 (316)
T ss_dssp CCCEEEEEEC--SSCCCEEEEESCSE-EETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSC
T ss_pred CCcEEEEEec--CCCCCeEEecCCCc-cCCCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeecCCCceEEEEECCC
Confidence 233444432 23456666655444 789999999999954 566899999887764322111111 113447999999
Q ss_pred ecccceEEEEEEEeCCcce-----eeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCe
Q psy12425 356 YGVDADEYVCRAVNKGGVK-----STKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNE 427 (591)
Q Consensus 356 ~~~d~g~y~c~a~n~~g~~-----~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~ 427 (591)
..+|+|.|+|.|.|..|.. +....|.|.. +|.+...+. ..+..|+.+.|.|.+. .|.+.+.|+++|.
T Consensus 182 ~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~----~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~ 256 (316)
T 3vh8_G 182 MLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG----PKVQAGESVTLSCSSR-SSYDMYHLSREGG 256 (316)
T ss_dssp CGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC----SCCCTTSCCEEEEEES-SCCSEEEEEETTS
T ss_pred ChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC----CeecCCCcEEEEEECC-CCCcEEEEEECCC
Confidence 9999999999999998752 4446666654 233332221 2467899999999997 4788999999998
Q ss_pred EeeeccceEEEe-cCCeeEEEEeccCCCcceeEEEEEEcCCCc-----cceEEEEEecCCC
Q psy12425 428 VIESGGHFHVET-SERHAILTIRDASNVDTAPYRVVAENDLGM-----DSAIVKIQISDRP 482 (591)
Q Consensus 428 ~~~~~~~~~~~~-~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~-----~~~~~~~~v~~~p 482 (591)
.+.......... ......|.|.++. |+|.|+|.|.|..+. .+..+.|.|.++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 257 AHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp SCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred cCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 765332221111 1234789999999 999999999998764 3666677776655
No 96
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.92 E-value=1e-22 Score=186.46 Aligned_cols=266 Identities=14% Similarity=0.110 Sum_probs=177.7
Q ss_pred eEEeeccccceeccccEEEEEEEcCCC-CCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCc
Q psy12425 294 EIIVPLRNANAIQNHNAQFQCTITGCP-KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG 372 (591)
Q Consensus 294 ~~~~~~~~~~~~~g~~~~l~c~~~~~p-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g 372 (591)
.+..+...+.+..|+++.|.|.+.+.+ .+.|.|++++..+.... ......+ ..|.|.++...|+|.|+|. ..|
T Consensus 8 ~~~~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~-~~~~~~~--~~L~i~~v~~~d~G~Y~C~---~~g 81 (325)
T 1n26_A 8 AQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHP-SRWAGMG--RRLLLRSVQLHDSGNYSCY---RAG 81 (325)
T ss_dssp CCCCCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCC-EEEEEES--SEEEECSCCGGGCEEEEEE---SSS
T ss_pred ccccCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCccc-ccccccc--ceEEecccchhhCeEeEEE---eCC
Confidence 333343444457899999999998754 78999999877653222 1222222 2799999999999999999 367
Q ss_pred ceeeeeEEEEecCCcccCCCCcccceeec-CCCeEEEEEeeecc----CCC--eEEEeeC-CeEeeeccceEE--EecCC
Q psy12425 373 VKSTKAELIIMTAPKFNVPPRFRDTAYFD-KGENVVVKIPFTGY----PKP--KITWYRD-NEVIESGGHFHV--ETSER 442 (591)
Q Consensus 373 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~~-~g~~~~l~c~~~~~----p~~--~v~W~~~-~~~~~~~~~~~~--~~~~~ 442 (591)
.....+.|.|..+|..+. +... .+....+.|..... +.. .+.+.+. +.... ...... .....
T Consensus 82 ~~~~~~~L~V~~pP~~P~-------l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~~~-~~~~~c~~~~~~~ 153 (325)
T 1n26_A 82 RPAGTVHLLVDVPPEEPQ-------LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAE-DFQEPCQYSQESQ 153 (325)
T ss_dssp SCSCEEEEEECCCCCCCC-------CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEESSSSCE-EEEEEEEEETTTT
T ss_pred EEeeeEEEEeccCCCCCc-------eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEccCCCCC-cccccCCCCCCCC
Confidence 777788999988775321 1111 22222455554321 111 2333221 10000 000011 11234
Q ss_pred eeEEEEeccC-CCcceeEEEEEEcCCCccc-eEEEEEe--cCCCCCCCCCeeeeecC--CeeEEEeeccccC-CCcceee
Q psy12425 443 HAILTIRDAS-NVDTAPYRVVAENDLGMDS-AIVKIQI--SDRPDPPQFPTVEDIGH--DSLALVWRAPIWD-GGSNITN 515 (591)
Q Consensus 443 ~~~l~i~~~~-~~~~g~y~c~a~n~~g~~~-~~~~~~v--~~~p~~p~~~~~~~~~~--~~v~l~W~~p~~~-~~~~~~~ 515 (591)
...+.|..+. ....|.|+|.|.|..|... ....+.+ ..+|.+|.++.+...+. .++.|+|++|... ++..+.+
T Consensus 154 ~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~ 233 (325)
T 1n26_A 154 KFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLR 233 (325)
T ss_dssp EEEEEECCCTTCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEE
T ss_pred CEEEEECCCcccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEE
Confidence 5677787765 5678999999999999863 2333332 35689999988887653 5899999987642 4557899
Q ss_pred EEEEeeeCCCCceEEec-eeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEE
Q psy12425 516 YIVEKREHPMSSWIRVG-NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 573 (591)
Q Consensus 516 y~v~~~~~~~~~~~~~~-~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~ 573 (591)
|+|+|+......|.... ......+.|.+|.+++.|.|+|+|.|..|.|.+|..+..+.
T Consensus 234 Y~V~yr~~~~~~W~~~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~ 292 (325)
T 1n26_A 234 FELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAM 292 (325)
T ss_dssp EEEEEEETTCSCCEEEECGGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEE
T ss_pred EEEEEEeCCCCCCEEEcccCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccc
Confidence 99999988878898753 34457899999999999999999999999988888776554
No 97
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.92 E-value=1.1e-22 Score=181.28 Aligned_cols=244 Identities=14% Similarity=0.132 Sum_probs=178.5
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCCCC-eeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
+|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+... ...|.|.++..+|+|.|+|.|.|.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~----------~~~l~i~~~~~~d~G~Y~C~~~~~ 70 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS----------TPSYRITSASVNDSGEYRCQRGLS 70 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEESSS
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc----------CCeEEEecCCcccCeEEEEEEecC
Confidence 3667777777889999999999999999888 99999998887543 126999999999999999999876
Q ss_pred CcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEee-eccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEe
Q psy12425 371 GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF-TGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIR 449 (591)
Q Consensus 371 ~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~ 449 (591)
.+ +..+.+.|..++....++ ...+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .....|.|.
T Consensus 71 ~~--s~~~~l~v~~~~~~~~~~----~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~--------~~~~~l~i~ 136 (262)
T 3rjd_A 71 GR--SDPIQLEIHRGWLLLQVS----SRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF--------HWNSNLTIL 136 (262)
T ss_dssp CC--CCCEEEEEECSSEEEEES----CSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE--------EECCCEEES
T ss_pred Cc--cccEEEEEeccceEecCC----CeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc--------CCCCeEEEE
Confidence 54 345677777665433222 2456789999999999 78888999999999877422 235679999
Q ss_pred ccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCCC---eeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCC
Q psy12425 450 DASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFP---TVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS 526 (591)
Q Consensus 450 ~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~---~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~ 526 (591)
++..+|.|.|+|.|.|..|..+..+.+.+..++.+|... ......+..+.|.|........ +...+.+.|...+..
T Consensus 137 ~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~-p~~~~~~~w~~~~~~ 215 (262)
T 3rjd_A 137 KTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQR-PGLQLYFSFYMGSKT 215 (262)
T ss_dssp SCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC------EEEEEEETTEE
T ss_pred ECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCC-CCccEEEEEEeCCcE
Confidence 999999999999999999888888888888754333211 1112356789999986422110 222333344333211
Q ss_pred ceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCC
Q psy12425 527 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRS 563 (591)
Q Consensus 527 ~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~ 563 (591)
.........+.|.++...+.+.|+|.|.|..|..
T Consensus 216 ---~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 216 ---LRGRNTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp ---EEEEESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred ---ecccCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 1122344589999999999999999999999963
No 98
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.91 E-value=1.1e-22 Score=184.18 Aligned_cols=129 Identities=12% Similarity=0.011 Sum_probs=94.5
Q ss_pred cCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCC
Q psy12425 256 EGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP 335 (591)
Q Consensus 256 ~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~ 335 (591)
..|.|.|+|.|.|..+.... ....+.+... .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++.....
T Consensus 150 ~~d~G~Y~C~a~n~~~~~~s--~~~~l~v~~~---~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~ 224 (289)
T 3mjg_X 150 IFEDRSYICKTTIGDREVDS--DAYYVYRLQV---SSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGR 224 (289)
T ss_dssp CCCSSEEEEEEEETTEEEEC--CCEEEEECCC---CCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSC
T ss_pred eccCcEEEEEEEeCCceeee--eeEEEEecCC---CCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCC
Confidence 46889999999986654322 2234444422 456666666667789999999999999999999999987665433
Q ss_pred CCceEEEE-----eCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCccc
Q psy12425 336 SARHHIFA-----EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFN 389 (591)
Q Consensus 336 ~~~~~~~~-----~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~ 389 (591)
........ .....+|.|.++..+|+|.|+|.|.|..|....++.|.|...|...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~~ 283 (289)
T 3mjg_X 225 LVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESGH 283 (289)
T ss_dssp CCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC---
T ss_pred cccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEecCc
Confidence 22211111 1134589999999999999999999999999999999998776543
No 99
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.91 E-value=1.5e-23 Score=193.37 Aligned_cols=274 Identities=14% Similarity=0.182 Sum_probs=160.7
Q ss_pred CceeeeecCCeEEEEEEeccC-CCceEEEEECCEEe----ec-----CCceeEEEe-----CCeEEEEEcccCCCCceEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVV----QS-----DDRFKFTVL-----DDYIIIFIKEIRKEDAGDY 66 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~-p~~~v~W~~~~~~~----~~-----~~~~~~~~~-----~~~~~l~i~~~~~~d~g~Y 66 (591)
|..+.+.+|+++.|.|.+.+. |.+.|.|+|++..+ .. ..++..... ....+|.|.+++.+|+|.|
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (327)
T 2wng_A 10 DKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTY 89 (327)
T ss_dssp CSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEE
T ss_pred CCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEE
Confidence 678999999999999999987 88999999997532 11 112222111 3345899999999999999
Q ss_pred EEEEEcCCeee-----EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEe
Q psy12425 67 TVNLSNSSGSV-----SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST 141 (591)
Q Consensus 67 ~c~~~n~~g~~-----~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 141 (591)
+|.|.|..+.. ...+.|.|...|.+|... .|.
T Consensus 90 ~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~----------------~~~--------------------------- 126 (327)
T 2wng_A 90 YCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVS----------------GPA--------------------------- 126 (327)
T ss_dssp EEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEE----------------CCS---------------------------
T ss_pred EEEeecCCCcceeEeecCcEEEEEEecCCCceee----------------ccc---------------------------
Confidence 99999986542 234677777665443210 000
Q ss_pred ecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcce
Q psy12425 142 TCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRI 221 (591)
Q Consensus 142 ~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~ 221 (591)
..+..+....+.|.+... +| ..+.++|... +..+
T Consensus 127 ---------~~~~~g~~~~l~C~~~g~--------------------p~-------------~~~~v~W~k~----g~~l 160 (327)
T 2wng_A 127 ---------ARATPQHTVSFTCESHGF--------------------SP-------------RDITLKWFKN----GNEL 160 (327)
T ss_dssp ---------SCBCTTCEEEEEEEEEEE--------------------BS-------------SCCEEEEEET----TEEC
T ss_pred ---------cccCCCCEEEEEEEEeCc--------------------cC-------------CCcEEEEEEC----CEEc
Confidence 012345566777776521 00 0135677652 2112
Q ss_pred EEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccc
Q psy12425 222 QGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRN 301 (591)
Q Consensus 222 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~ 301 (591)
.................. ...|.|.....++.|.|+|.|.|..|..... .....+. .....+|.+...+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~------~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~--~~~~~~~-~~v~~~P~i~~~~~~ 231 (327)
T 2wng_A 161 SDFQTNVDPVGESVSYSI------HSTAKVVLTREDVHSQVICEVAHVTLQGDPL--RGTANLS-ETIRVPPTLEVTQQP 231 (327)
T ss_dssp CCEEEEEECSSCCSCEEE------EEEEEEECCTTGGGCEEEEEEECTTSCSCCE--EEEEEGG-GTBCBCCEEEEEEEC
T ss_pred cccccccccccCCCceEE------EEEEEEechhcCcCceEEEEEeccccCCCcc--cceEEec-cccCCCCEEEEecCC
Confidence 111000000000000011 1245666667777899999999987753211 1111111 112356777665444
Q ss_pred cceeccccEEEEEEEcCC-CCC-eeEEecCCccCCCCCceEEEEeCC-e----EEEEEcceecccceEEEEEEEeCCcce
Q psy12425 302 ANAIQNHNAQFQCTITGC-PKP-TISWLKGSREITPSARHHIFAEGD-T----YTLIINSVYGVDADEYVCRAVNKGGVK 374 (591)
Q Consensus 302 ~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~~~~~~~~~~~~~~~~~~-~----~~l~i~~~~~~d~g~y~c~a~n~~g~~ 374 (591)
+.+|+.+.|.|.+.|. |.+ .+.|+++|..+.......+...+. . ..|.|..+..+|.|.|+|.|.|..|..
T Consensus 232 --~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 232 --VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp --CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred --cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 7799999999999995 444 899999998765432222222222 1 358889999999999999999998865
Q ss_pred e
Q psy12425 375 S 375 (591)
Q Consensus 375 ~ 375 (591)
.
T Consensus 310 ~ 310 (327)
T 2wng_A 310 V 310 (327)
T ss_dssp E
T ss_pred c
Confidence 3
No 100
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.91 E-value=2.2e-23 Score=188.80 Aligned_cols=264 Identities=12% Similarity=0.088 Sum_probs=165.4
Q ss_pred CeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecC--CceeeecCcccCCcEEEEEEEEcCCCCC
Q psy12425 196 PVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA--PSQINIPNLIEGRQYEFRVYAQNEAGLS 273 (591)
Q Consensus 196 ~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~~~~~y~c~a~n~~g~~ 273 (591)
..+....|..++|.|.... .+.+| ..+............. ...|.|.++...|.|.|+|.|.|..|..
T Consensus 8 ~~~~v~~G~~v~L~C~~~~-----~v~W~-----~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 77 (289)
T 3mjg_X 8 PELVLNVSSTFVLTCSGSA-----PVVWE-----RMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLE 77 (289)
T ss_dssp SEEECCTTCCEEEEEEESS-----CCEEE-----BTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC-----
T ss_pred CeEEEeCCCcEEEEEeccc-----eEEEE-----CCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCC
Confidence 3455667888999998742 13322 2222211122211111 2579999999999999999999988753
Q ss_pred CCCCCcceEEEcCCCccCCCeEEeecc--ccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEE
Q psy12425 274 LPSSASNSVQIKDPMAAKAPEIIVPLR--NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLI 351 (591)
Q Consensus 274 ~~s~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~ 351 (591)
........+.+.++ ..|.+..... ...+.+|+.+.|.|.+. .|.+.+.|++.+........+ +... .+
T Consensus 78 ~~~~~~~~v~v~~p---~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~----~~~~-~~- 147 (289)
T 3mjg_X 78 TDERKRLYIFVPDP---TVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPY----DHQR-GF- 147 (289)
T ss_dssp -CCCEEEEEECCCT---TCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCE----ETTT-EE-
T ss_pred cCcEEeEEEEEECC---CcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceee----cCCc-Ce-
Confidence 33333444444321 1222211111 15578899999999999 677888888764222111111 1111 11
Q ss_pred EcceecccceEEEEEEEeCCccee-eeeEEEEec--CCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeE
Q psy12425 352 INSVYGVDADEYVCRAVNKGGVKS-TKAELIIMT--APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEV 428 (591)
Q Consensus 352 i~~~~~~d~g~y~c~a~n~~g~~~-~~~~l~v~~--~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~ 428 (591)
+...|+|.|+|.|.|..+... ....+.+.. +|.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..
T Consensus 148 ---~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~---~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~ 221 (289)
T 3mjg_X 148 ---SGIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNA---VQTVVRQGENITLMCIVIGNEVVNFEWTYPRKE 221 (289)
T ss_dssp ---EECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEE---SCSEEETTSCEEEEEEEESCSSBEEEEECTTSS
T ss_pred ---eeeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeC---CcceeEcCCCEEEEEEECCCCCcceEEEcCCcc
Confidence 146799999999998776553 345566655 34433322 224578899999999999999999999987764
Q ss_pred eeeccceEEEe-----cCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCC
Q psy12425 429 IESGGHFHVET-----SERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 485 (591)
Q Consensus 429 ~~~~~~~~~~~-----~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p 485 (591)
........... ......|.|.++..+|+|.|+|.|.|..|....++.|.+...|...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~~ 283 (289)
T 3mjg_X 222 SGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESGH 283 (289)
T ss_dssp SSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC---
T ss_pred CCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEecCc
Confidence 43221111111 2246889999999999999999999999999999999998776543
No 101
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.91 E-value=8.4e-24 Score=191.95 Aligned_cols=261 Identities=15% Similarity=0.159 Sum_probs=177.2
Q ss_pred EeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCC
Q psy12425 199 TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 278 (591)
Q Consensus 199 ~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~ 278 (591)
....|..++|.|.... .+.+| ......+. . ........|.|.++...|.|.|+|.+.|..|.. ..
T Consensus 15 ~v~~G~~v~L~C~~~~-----~v~W~-----~~~~~~~~-~-~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~---~~ 79 (292)
T 4dkd_C 15 VVKPGATVTLRCVGNG-----SVEWD-----GPPSPHWT-L-YSDGSSSILSTNNATFQNTGTYRCTEPGDPLGG---SA 79 (292)
T ss_dssp EECTTCCEEEEEECSS-----CCCBC-----CCCCSSCE-E-CCBTTEEEEEESSCCGGGCSCEEECCCC----C---CE
T ss_pred EEcCCCcEEEEEcCCC-----ceEEc-----cCCCCceE-E-eccCceEEEEEcccccccCEEEEEEEccCCCCc---ce
Confidence 4557888999998742 13322 11221211 1 111234589999999999999999999877643 23
Q ss_pred cceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCC--CeeEEecC-CccCCCCCceEEEEeCCeEEEEEcce
Q psy12425 279 SNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK--PTISWLKG-SREITPSARHHIFAEGDTYTLIINSV 355 (591)
Q Consensus 279 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~--~~v~W~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~ 355 (591)
...+.+.. .+..+...+....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+....++.+..++ .|.|.++
T Consensus 80 ~~~l~V~~----~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~~ 151 (292)
T 4dkd_C 80 AIHLYVKD----PARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWH---GFTIHRA 151 (292)
T ss_dssp EECCEECC----SSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSS---CCEETTC
T ss_pred EEEEEEcC----ccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCc---eEEECCC
Confidence 44455542 1222344455677889999999999998 54 78999987 5555544454443333 3999999
Q ss_pred ecccceEEEEEEEeCCcce-eeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeeccCC-CeEEEeeCCeEe
Q psy12425 356 YGVDADEYVCRAVNKGGVK-STKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK-PKITWYRDNEVI 429 (591)
Q Consensus 356 ~~~d~g~y~c~a~n~~g~~-~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~-~~v~W~~~~~~~ 429 (591)
..+|+|.|+|.|.|..|.. +....|.|.. +|.+...+. ...+..|+.+.|.|.+.+.|. +.+.|++++..+
T Consensus 152 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~---~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~ 228 (292)
T 4dkd_C 152 KFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPA---ELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKL 228 (292)
T ss_dssp CGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESS---CBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCC
T ss_pred CHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCC---ceeEecCCCEEEEEEecCCCCceEEEEeCCCccc
Confidence 9999999999999987765 4478888886 666554432 234468999999999998765 578899988766
Q ss_pred eeccceEEEec--CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCC
Q psy12425 430 ESGGHFHVETS--ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 485 (591)
Q Consensus 430 ~~~~~~~~~~~--~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p 485 (591)
.......+... .....|.|.++..+|.|.|+|.|.|..|..+..+.|.|.....++
T Consensus 229 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~ 286 (292)
T 4dkd_C 229 AIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGNS 286 (292)
T ss_dssp CCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-------
T ss_pred ccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCCcc
Confidence 43332222211 134689999999999999999999999999999999998765443
No 102
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.91 E-value=8.4e-23 Score=172.59 Aligned_cols=182 Identities=25% Similarity=0.451 Sum_probs=149.2
Q ss_pred CCeEEeecc--ccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 292 APEIIVPLR--NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 292 ~p~~~~~~~--~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
||.+..... +..+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+... ..+|.|.++..+|+|.|+|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGS--NTELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETT--TTEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCC--eeEEEEecCChhcCcEEEEEEEc
Confidence 455554433 46678999999999999999999999999998887777665433 34799999999999999999999
Q ss_pred CCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeC--CeEeee-----ccceEEEecCC
Q psy12425 370 KGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRD--NEVIES-----GGHFHVETSER 442 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~--~~~~~~-----~~~~~~~~~~~ 442 (591)
..|.......|.|..+|.+...+ ...+..|+.+.|.|.+.+.|.+.+.|+++ +..+.. ..++.+.....
T Consensus 80 ~~~~~~~~~~l~V~~~p~~~~~~----~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (192)
T 2va4_A 80 KAGEDEKQAFLQVFVQPHIIQLK----NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHG 155 (192)
T ss_dssp TTEEEEEEEEEEEEEEEEEEEEC----CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETT
T ss_pred cccccceEEEEEEEccCcccccC----cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccC
Confidence 99988888889998888765433 23456799999999999999999999998 555432 23455555566
Q ss_pred eeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEec
Q psy12425 443 HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 443 ~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
...|.|.++..+|.|.|+|.|.|..|..+.++.|.|.
T Consensus 156 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 156 SSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred ceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 7899999999999999999999999998888888763
No 103
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.91 E-value=7.5e-25 Score=203.00 Aligned_cols=258 Identities=15% Similarity=0.253 Sum_probs=115.0
Q ss_pred ccccceeccccEEEEEEEcCC-CCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeee
Q psy12425 299 LRNANAIQNHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTK 377 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~ 377 (591)
+....+.+|+.+.|.|.+.+. |.+.+.|++++..+....++.+ ...+|.|.+++.+|+|.|+|.|.|. |.....
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~ 89 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV----GPQRLQVLNASHEDSGAYSCRQRLT-QRVLCH 89 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe----ccceEEEeecccccCEEEEEEEEeC-CeEEEE
Confidence 567788999999999999886 6789999999988876655544 2237999999999999999999998 777777
Q ss_pred eEEEEecCCc----------------------ccCCCCcc-cceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccc
Q psy12425 378 AELIIMTAPK----------------------FNVPPRFR-DTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGH 434 (591)
Q Consensus 378 ~~l~v~~~p~----------------------~~~~~~~~-~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~ 434 (591)
..|.|...|. +..+.... ....+..|+.+.|.|.+.|.|.+.+.|++++..+.....
T Consensus 90 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~ 169 (334)
T 1ry7_B 90 FSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHR 169 (334)
T ss_dssp -----------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSS
T ss_pred EEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccc
Confidence 7777775442 22111111 124577899999999999999999999999988765443
Q ss_pred e-EEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCC-CCCCC-----eeeeecCCeeEEEeecccc
Q psy12425 435 F-HVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPD-PPQFP-----TVEDIGHDSLALVWRAPIW 507 (591)
Q Consensus 435 ~-~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~-~p~~~-----~~~~~~~~~v~l~W~~p~~ 507 (591)
+ .+........|.|.++...|.|.|+|.|.|..|.....+.+.|...+. +|... ......+..+.|.|....
T Consensus 170 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g- 248 (334)
T 1ry7_B 170 IGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYS- 248 (334)
T ss_dssp TTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBC-
T ss_pred ccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEec-
Confidence 2 122334567899999999999999999999999988888888876432 22211 122345677999998632
Q ss_pred CCCcceeeEEEEeee--CC------CCce-EEec-------eeeeeEEEEcCcccCceEEEEEEEEcCCcCCCC
Q psy12425 508 DGGSNITNYIVEKRE--HP------MSSW-IRVG-------NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDP 565 (591)
Q Consensus 508 ~~~~~~~~y~v~~~~--~~------~~~~-~~~~-------~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~ 565 (591)
.+...+.+.... .+ .... .... ......|.|.++...+.+.|+|.|.|.+|....
T Consensus 249 ---~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 319 (334)
T 1ry7_B 249 ---DAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHH 319 (334)
T ss_dssp ---SSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEE
T ss_pred ---CCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEE
Confidence 222233333210 10 0000 0000 111237999999999999999999999997544
No 104
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.91 E-value=5.2e-23 Score=190.39 Aligned_cols=224 Identities=13% Similarity=0.140 Sum_probs=162.9
Q ss_pred CCceeeecCcccCCcEEEEEEE-EcCCCCCCCCCCcceEEEcCCCccCCCeEE--eeccccceecc---ccEEEEEE-Ec
Q psy12425 245 APSQINIPNLIEGRQYEFRVYA-QNEAGLSLPSSASNSVQIKDPMAAKAPEII--VPLRNANAIQN---HNAQFQCT-IT 317 (591)
Q Consensus 245 ~~~~~~i~~l~~~~~~~y~c~a-~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~g---~~~~l~c~-~~ 317 (591)
....|.|.++...|.|.|+|.+ .+..|.. .....+.+. .+|.+. .......+.+| +.+.|.|. +.
T Consensus 90 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~---~~~~~l~V~-----~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~ 161 (331)
T 3u83_A 90 TDGTIRLSRLELEDEGVYICEFATFPTGNR---ESQLNLTVM-----AKPTNWIEGTQAVLRAKKGQDDKVLVATCTSAN 161 (331)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEEETTEEE---EEEEEEEEE-----BCCEEEEEECSSCEEECTTCCCCEEEEEEEEEE
T ss_pred CCceEEEcccCcccCcEEEEEEEecCCCcc---EEEEEEEEe-----cCCcceeecCCCceeecCCCccceEEEEEEecC
Confidence 3467999999999999999985 4444432 233445544 344442 23445556777 77999998 88
Q ss_pred CCCCCeeEEecCCccCCCCCceEEEEeCC----eEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCC
Q psy12425 318 GCPKPTISWLKGSREITPSARHHIFAEGD----TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR 393 (591)
Q Consensus 318 ~~p~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~ 393 (591)
+.|.+.+.|++++..... .......+. ...|.|.++..+|.|.|+|.|.|..|.....+.|.|..+|.+...+.
T Consensus 162 ~~p~~~i~W~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~ 239 (331)
T 3u83_A 162 GKPPSVVSWETRLKGEAE--YQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGF 239 (331)
T ss_dssp EBSCCEEEEEESSCCEEE--EEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECC
T ss_pred CcCCceEEEEcCCCCccc--cceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecC
Confidence 999999999986322110 001111111 13688899999999999999999999888889999988887654332
Q ss_pred cccceeecCCCeEEEEEeeeccCCCe-EEEeeCCeEeeeccceEEEecCCeeEEEEe-ccCCCcceeEEEEEEcCCCccc
Q psy12425 394 FRDTAYFDKGENVVVKIPFTGYPKPK-ITWYRDNEVIESGGHFHVETSERHAILTIR-DASNVDTAPYRVVAENDLGMDS 471 (591)
Q Consensus 394 ~~~~~~~~~g~~~~l~c~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~~~g~y~c~a~n~~g~~~ 471 (591)
....+..|+.+.|.|.+.|.|.|. +.|++++..+.... .+ ....|.|. ++..+|.|.|+|.|.|..|..+
T Consensus 240 --~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~--~~----~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~ 311 (331)
T 3u83_A 240 --DGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV--EA----QNRTLFFKGPINYSLAGTYICEATNPIGTRS 311 (331)
T ss_dssp --CSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--EE----ETTEEEECSCCCGGGCEEEEEEEEETTEEEE
T ss_pred --CCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc--ee----cCcEEEEeCCCccccCeEEEEEEEeccccce
Confidence 233467899999999999999998 99999998775432 11 24579999 8999999999999999999999
Q ss_pred eEEEEEecCCCCCCC
Q psy12425 472 AIVKIQISDRPDPPQ 486 (591)
Q Consensus 472 ~~~~~~v~~~p~~p~ 486 (591)
..+.|.|...+....
T Consensus 312 ~~~~l~V~~~~~~~~ 326 (331)
T 3u83_A 312 GQVEVNITEAAALEH 326 (331)
T ss_dssp EEEEECCBC------
T ss_pred EEEEEEEeccchhhh
Confidence 999999988775443
No 105
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.91 E-value=9.5e-24 Score=178.39 Aligned_cols=185 Identities=30% Similarity=0.494 Sum_probs=152.0
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCC-CCceEEEEeCCeEEEEEcceecccceEEEEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-SARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
+.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+..++. +|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEEEEE
Confidence 3567777777778899999999999999999999999999888765 34555544443 79999999999999999999
Q ss_pred eCCcce-eeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEE
Q psy12425 369 NKGGVK-STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILT 447 (591)
Q Consensus 369 n~~g~~-~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~ 447 (591)
|..|.. .....+.|..+|.+...+. ...+..|+.+.|.|.+.|.|.+.+.|++++..+....++.+.. ...|.
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~---~~~L~ 156 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPKITRPPI---NVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLE---SGSLR 156 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEEECCC---CEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECT---TSCEE
T ss_pred cCCCceeEeEEEEEEEeCCccccCCc---ceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEec---CCcEE
Confidence 998874 5667888888887765442 4567889999999999999999999999999887766655442 34799
Q ss_pred EeccCCCcceeEEEEEEcCCCcc-ceEEEEEecCCC
Q psy12425 448 IRDASNVDTAPYRVVAENDLGMD-SAIVKIQISDRP 482 (591)
Q Consensus 448 i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p 482 (591)
|.++..+|.|.|+|.|.|..|.. +..+.|.|..+|
T Consensus 157 i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 157 IHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99999999999999999999988 567888887654
No 106
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.91 E-value=5.1e-23 Score=189.75 Aligned_cols=217 Identities=17% Similarity=0.218 Sum_probs=141.4
Q ss_pred CCceeeecCcccCCcEEEEEEEEcCCCCCCC--CCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCC
Q psy12425 245 APSQINIPNLIEGRQYEFRVYAQNEAGLSLP--SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP 322 (591)
Q Consensus 245 ~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~--s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~ 322 (591)
....|.|.++...|.|.|+|.|.|..+.... ......+.+..+ +.+|.+..+ ...+.+|+.+.|.|.+.+.|.+
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~--p~~p~i~~~--~~~~~~g~~~~l~C~~~g~p~~ 147 (327)
T 2wng_A 72 MDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAK--PSAPVVSGP--AARATPQHTVSFTCESHGFSPR 147 (327)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBC--CCCCEEECC--SSCBCTTCEEEEEEEEEEEBSS
T ss_pred ceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEec--CCCceeecc--ccccCCCCEEEEEEEEeCccCC
Confidence 3457999999999999999999997553111 112234444422 344555422 3567899999999999998766
Q ss_pred --eeEEecCCccCCCCCceEEEE-eCC----eEEEEEcceecccceEEEEEEEeCCcce---eeeeEE--EEecCCcccC
Q psy12425 323 --TISWLKGSREITPSARHHIFA-EGD----TYTLIINSVYGVDADEYVCRAVNKGGVK---STKAEL--IIMTAPKFNV 390 (591)
Q Consensus 323 --~v~W~~~~~~~~~~~~~~~~~-~~~----~~~l~i~~~~~~d~g~y~c~a~n~~g~~---~~~~~l--~v~~~p~~~~ 390 (591)
.+.|++++..+.......... .++ ...|.|.....+|.|.|+|.|.|..+.. .....+ .+..+|.+..
T Consensus 148 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~ 227 (327)
T 2wng_A 148 DITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEV 227 (327)
T ss_dssp CCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEE
T ss_pred CcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEE
Confidence 899999998876543211111 111 1247777777777899999999988763 222222 2344555443
Q ss_pred CCCcccceeecCCCeEEEEEeeeccC-CC-eEEEeeCCeEeeeccceEEEecCC-----eeEEEEeccCCCcceeEEEEE
Q psy12425 391 PPRFRDTAYFDKGENVVVKIPFTGYP-KP-KITWYRDNEVIESGGHFHVETSER-----HAILTIRDASNVDTAPYRVVA 463 (591)
Q Consensus 391 ~~~~~~~~~~~~g~~~~l~c~~~~~p-~~-~v~W~~~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~~~g~y~c~a 463 (591)
.+. .+..|+.+.|.|.+.|.+ ++ .+.|+++|..+.......+....+ ...|.|..+..+|.|.|+|.|
T Consensus 228 ~~~-----~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a 302 (327)
T 2wng_A 228 TQQ-----PVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQV 302 (327)
T ss_dssp EEE-----CCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEE
T ss_pred ecC-----CcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEE
Confidence 221 157899999999999954 44 899999999886543222222222 256888999999999999999
Q ss_pred EcCCCcc
Q psy12425 464 ENDLGMD 470 (591)
Q Consensus 464 ~n~~g~~ 470 (591)
.|..|..
T Consensus 303 ~N~~~~~ 309 (327)
T 2wng_A 303 EHDGQPA 309 (327)
T ss_dssp EETTCCC
T ss_pred EeCCCCC
Confidence 9999875
No 107
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.91 E-value=8.5e-23 Score=172.78 Aligned_cols=177 Identities=15% Similarity=0.257 Sum_probs=146.4
Q ss_pred CCeEEeeccccceeccccEEEEEEEc-CCCCCeeEEecCCccCCCCC--ceEEEEeCC-------eEEEEEcceecccce
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTIT-GCPKPTISWLKGSREITPSA--RHHIFAEGD-------TYTLIINSVYGVDAD 361 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~-~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~-------~~~l~i~~~~~~d~g 361 (591)
+|.+...+.+..+.+|+.+.|.|.+. +.|.+.+.|++++..+.... ++.+..... ..+|.|.++...|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 57778888888999999999999999 99999999999999887663 333332222 458999999999999
Q ss_pred EEEEEEEeCCcceee-eeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCC-eEEEeeCCeEeeeccceEEEe
Q psy12425 362 EYVCRAVNKGGVKST-KAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVET 439 (591)
Q Consensus 362 ~y~c~a~n~~g~~~~-~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~ 439 (591)
.|+|.|.|..|.... .+.|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.| .+.|++++..+......
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~---- 154 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPE---DRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH---- 154 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCSCEEEECCC---CEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS----
T ss_pred EEEEEEEeCCCceecccEEEEEecCCeEEcCCC---cEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc----
Confidence 999999998877644 48899988887765443 3567889999999999999999 99999999887654432
Q ss_pred cCCeeEEEEeccCCCcceeEEEEEEcCCCccc-eEEEEEe
Q psy12425 440 SERHAILTIRDASNVDTAPYRVVAENDLGMDS-AIVKIQI 478 (591)
Q Consensus 440 ~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~-~~~~~~v 478 (591)
.....|.|.++. |+|.|+|.|.|..|... ..+.|.|
T Consensus 155 -~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 155 -GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp -SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 457889999987 78999999999999884 7888888
No 108
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.91 E-value=2.8e-22 Score=169.58 Aligned_cols=180 Identities=24% Similarity=0.438 Sum_probs=146.3
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCC--ceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD--RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~ 79 (591)
|.++.+.+|+++.|.|.+.|.|.+.+.|+|+|..+.... ++++...+....|.|.+++.+|+|.|+|.+.|..|....
T Consensus 12 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~ 91 (194)
T 2a38_A 12 LQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATS 91 (194)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeE
Confidence 577899999999999999999999999999999887663 667777777889999999999999999999988776555
Q ss_pred EEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEE
Q psy12425 80 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEY 159 (591)
Q Consensus 80 ~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 159 (591)
.+.|.|...+
T Consensus 92 ~~~l~v~~~~---------------------------------------------------------------------- 101 (194)
T 2a38_A 92 TAELLVKAET---------------------------------------------------------------------- 101 (194)
T ss_dssp EEEEEEECCC----------------------------------------------------------------------
T ss_pred EEEEEEccCC----------------------------------------------------------------------
Confidence 4444443210
Q ss_pred EEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEE
Q psy12425 160 LFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRV 239 (591)
Q Consensus 160 ~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 239 (591)
T Consensus 102 -------------------------------------------------------------------------------- 101 (194)
T 2a38_A 102 -------------------------------------------------------------------------------- 101 (194)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCC
Q psy12425 240 NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC 319 (591)
Q Consensus 240 ~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~ 319 (591)
.+|.+...+....+..|+.+.|.|.+.+.
T Consensus 102 ---------------------------------------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 130 (194)
T 2a38_A 102 ---------------------------------------------------APPNFVQRLQSMTVRQGSQVRLQVRVTGI 130 (194)
T ss_dssp ---------------------------------------------------EEEEEEECCCCEEECTTEEEEEEEEEEEE
T ss_pred ---------------------------------------------------CCCEEEeCCccEEEcCCCEEEEEEEEEEe
Confidence 01111111122335677889999999999
Q ss_pred CCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEE
Q psy12425 320 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 382 (591)
Q Consensus 320 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v 382 (591)
|.+.+.|++++..+....++.+..++...+|.|.++..+|.|.|+|.|.|..|.....+.|.|
T Consensus 131 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 131 PTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp SCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 999999999999998888888888888889999999999999999999999999888777776
No 109
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.91 E-value=1.2e-22 Score=187.87 Aligned_cols=278 Identities=16% Similarity=0.206 Sum_probs=176.0
Q ss_pred CCceeeeecCCeEEEEEEeccC----CCceEEEEECC--E-------------Eee--cCCceeEE-EeCCeEEEEEccc
Q psy12425 1 MPNALYIPEGDNTKVKIFYAGD----QPMEVSLTKNG--R-------------VVQ--SDDRFKFT-VLDDYIIIFIKEI 58 (591)
Q Consensus 1 ~p~~~~v~~G~~~~l~C~~~~~----p~~~v~W~~~~--~-------------~~~--~~~~~~~~-~~~~~~~l~i~~~ 58 (591)
+|.++.+.+|+++.|.|.+.+. +.+.+.|+|++ . .+. ...|+.+. ......+|.|.++
T Consensus 20 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 99 (331)
T 3u83_A 20 VNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRL 99 (331)
T ss_dssp -CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSC
T ss_pred cCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEccc
Confidence 4678999999999999999876 45689999954 1 111 12333332 1223457999999
Q ss_pred CCCCceEEEEE-EEcCCeeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceE
Q psy12425 59 RKEDAGDYTVN-LSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWI 137 (591)
Q Consensus 59 ~~~d~g~Y~c~-~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~ 137 (591)
+.+|+|.|+|. +.+..|.....+.|.|...|..... -.++
T Consensus 100 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~---------------~~~~------------------------ 140 (331)
T 3u83_A 100 ELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIE---------------GTQA------------------------ 140 (331)
T ss_dssp CGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEE---------------ECSS------------------------
T ss_pred CcccCcEEEEEEEecCCCccEEEEEEEEecCCcceee---------------cCCC------------------------
Confidence 99999999998 5666787788888888875532110 0000
Q ss_pred EEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCC
Q psy12425 138 CISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDG 217 (591)
Q Consensus 138 ~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~ 217 (591)
.+.+..=..+....+.|.+... .....++|.... .
T Consensus 141 ---------~~~~~~g~~~~~~~l~C~~~~~----------------------------------~p~~~i~W~~~~--~ 175 (331)
T 3u83_A 141 ---------VLRAKKGQDDKVLVATCTSANG----------------------------------KPPSVVSWETRL--K 175 (331)
T ss_dssp ---------CEEECTTCCCCEEEEEEEEEEE----------------------------------BSCCEEEEEESS--C
T ss_pred ---------ceeecCCCccceEEEEEEecCC----------------------------------cCCceEEEEcCC--C
Confidence 0000000112445566653211 001346776521 1
Q ss_pred CcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEe
Q psy12425 218 GSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIV 297 (591)
Q Consensus 218 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~ 297 (591)
+ ....... . ..... .. ....|.|..+...|.|.|+|.|.|..|... ....+.+. .+|.+..
T Consensus 176 ~-~~~~~~~--~-~~~~~-~~------~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~---~~~~l~V~-----~~P~~~~ 236 (331)
T 3u83_A 176 G-EAEYQEI--R-NPNGT-VT------VISRYRLVPSREAHQQSLACIVNYHMDRFK---ESLTLNVQ-----YEPEVTI 236 (331)
T ss_dssp C-EEEEEEE--E-CTTSC-EE------EEEEEEECCCGGGTTCEEEEEEEETTEEEE---EEEECCEE-----EEEEEEE
T ss_pred C-cccccee--E-CCCCc-EE------EEEEEEEEeccccCCCEEEEEEecCCCcce---eeEEEEEe-----cCCeEEE
Confidence 1 1110000 0 01111 11 113578888899999999999999876432 22223332 3455543
Q ss_pred -eccccceeccccEEEEEEEcCCCCCe-eEEecCCccCCCCCceEEEEeCCeEEEEEc-ceecccceEEEEEEEeCCcce
Q psy12425 298 -PLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTLIIN-SVYGVDADEYVCRAVNKGGVK 374 (591)
Q Consensus 298 -~~~~~~~~~g~~~~l~c~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~g~y~c~a~n~~g~~ 374 (591)
......+.+|+.+.|.|.+.+.|.+. +.|++++..+..... ...+ +|.|. ++..+|+|.|+|.|.|..|..
T Consensus 237 ~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~---~~~~---~L~i~~~v~~~d~G~Y~C~a~N~~G~~ 310 (331)
T 3u83_A 237 EGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVE---AQNR---TLFFKGPINYSLAGTYICEATNPIGTR 310 (331)
T ss_dssp ECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEE---EETT---EEEECSCCCGGGCEEEEEEEEETTEEE
T ss_pred ecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccce---ecCc---EEEEeCCCccccCeEEEEEEEeccccc
Confidence 33445578899999999999999998 999999888764421 1222 79999 899999999999999999999
Q ss_pred eeeeEEEEecCCc
Q psy12425 375 STKAELIIMTAPK 387 (591)
Q Consensus 375 ~~~~~l~v~~~p~ 387 (591)
...+.|.|...+.
T Consensus 311 ~~~~~l~V~~~~~ 323 (331)
T 3u83_A 311 SGQVEVNITEAAA 323 (331)
T ss_dssp EEEEEECCBC---
T ss_pred eEEEEEEEeccch
Confidence 8888888877554
No 110
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.90 E-value=2.5e-22 Score=169.03 Aligned_cols=176 Identities=22% Similarity=0.354 Sum_probs=143.5
Q ss_pred EEeeccccceeccccEEEEEEEcCCCCCeeEEec-CCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcc
Q psy12425 295 IIVPLRNANAIQNHNAQFQCTITGCPKPTISWLK-GSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGV 373 (591)
Q Consensus 295 ~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~ 373 (591)
+...+.+..+.+|+.+.|.|.+.+.|. .+.|++ ++..+....++.+..++...+|.|.++..+|+|.|+|.+.|..|.
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 83 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQ 83 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCC
Confidence 344556677899999999999999887 999999 788888788888888888889999999999999999999999887
Q ss_pred e-eeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeee--ccceEEEecCCeeEEEEec
Q psy12425 374 K-STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIES--GGHFHVETSERHAILTIRD 450 (591)
Q Consensus 374 ~-~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~ 450 (591)
. .....|.|..+|.+...+ ....+..|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+. ....|.|.+
T Consensus 84 ~~~~~~~l~v~~~p~~~~~~---~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~---~~~~L~i~~ 157 (189)
T 2v44_A 84 TQEATVVLEIYQKLTFREVV---SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML---ANNNLQILN 157 (189)
T ss_dssp EEEEEEEEEEECCCEEESCC---CSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEEC---TTSCEEETT
T ss_pred cEEEEEEEEEecCCceeecC---CcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEe---cCCcEEEEE
Confidence 6 667888888888765433 234578999999999999999999999999988763 3344433 234899999
Q ss_pred cCCCcceeEEEEEEcCCCccceEEEEE
Q psy12425 451 ASNVDTAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 451 ~~~~~~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
+..+|.|.|+|.|.|..|.......+.
T Consensus 158 v~~~d~G~Y~C~a~n~~~~~~~~~~~~ 184 (189)
T 2v44_A 158 INKSDEGIYRCEGRVEARGEIDFRDII 184 (189)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEEEEE
T ss_pred cCcccCeEEEEEEEccccCceeeeeEE
Confidence 999999999999999997765444443
No 111
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.90 E-value=3.3e-22 Score=171.89 Aligned_cols=174 Identities=18% Similarity=0.274 Sum_probs=145.7
Q ss_pred eccccEEEEEEEcCC-CCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEe
Q psy12425 305 IQNHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 383 (591)
Q Consensus 305 ~~g~~~~l~c~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 383 (591)
..++.+.|.|.+.+. |.+.+.|++++..+....++.+...+...+|.|.++..+|+|.|+|.|.|..|.......+.+.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 367788999999885 5889999999999988888888888888899999999999999999999988877766666543
Q ss_pred c--------------------CCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEec-CC
Q psy12425 384 T--------------------APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETS-ER 442 (591)
Q Consensus 384 ~--------------------~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~ 442 (591)
. .|.+... ......+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+... +.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~ 172 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGG--LPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGR 172 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEB--CCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTT
T ss_pred eccchhhhccccCcccccccCCCccccc--CCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCC
Confidence 2 2222111 12345678999999999999999999999999999988777777665 56
Q ss_pred eeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecC
Q psy12425 443 HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 443 ~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
...|.|.++...|.|.|+|.|.|..|.....+.|.|..
T Consensus 173 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 173 TAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 78999999999999999999999999998888888763
No 112
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.90 E-value=4.6e-22 Score=167.75 Aligned_cols=181 Identities=20% Similarity=0.313 Sum_probs=143.0
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCC-CCeeEEec-CCccCCC-CCceEEEE-eCCeEEEEEcceecccceEEEEEE
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCP-KPTISWLK-GSREITP-SARHHIFA-EGDTYTLIINSVYGVDADEYVCRA 367 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p-~~~v~W~~-~~~~~~~-~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~a 367 (591)
++.+...+.+..+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+.. ..++.+.. .+...+|.|.++..+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 45566677778899999999999999977 88999999 7777663 34555443 356779999999999999999999
Q ss_pred EeCC-cceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeecc--ceEEEecCCee
Q psy12425 368 VNKG-GVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGG--HFHVETSERHA 444 (591)
Q Consensus 368 ~n~~-g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~ 444 (591)
.|.. +.....+.|.|..+|.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+.... ++.+. ...
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~~---~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~---~~~ 155 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNAP---TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVL---SNN 155 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEECC---SSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEEC---TTS
T ss_pred EcCCCcceEEEEEEEeecCceEecCC---CcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEe---cCC
Confidence 9998 455677888888888776544 23457889999999999999999999999998886433 33332 234
Q ss_pred EEEEeccCCCcceeEEEEEEcCCCccceEEEEEe
Q psy12425 445 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 478 (591)
Q Consensus 445 ~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v 478 (591)
.|.|.++...|.|.|+|.|.|..|.......+.+
T Consensus 156 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 156 YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred eEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 7999999999999999999999876654444443
No 113
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.90 E-value=2.4e-23 Score=193.20 Aligned_cols=270 Identities=13% Similarity=0.190 Sum_probs=186.7
Q ss_pred CCCeEEeeccccceeccccEEEEEEEc-------CCCCCeeEEecCCcc--CCCCCceEEEEeCCeEEEEEcceecccce
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTIT-------GCPKPTISWLKGSRE--ITPSARHHIFAEGDTYTLIINSVYGVDAD 361 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~-------~~p~~~v~W~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 361 (591)
..|.+...+.+..+.+|+.+.|.|.+. +.|.+.+.|++++.. +.......+...+. +|.|.++...|+|
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G 94 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDSG 94 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCCE
T ss_pred hhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccCE
Confidence 568888888889999999999999998 899999999999877 33332333333333 7999999999999
Q ss_pred EEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEe-----eeccCCCeEEEeeCCeEeeec-cce
Q psy12425 362 EYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIP-----FTGYPKPKITWYRDNEVIESG-GHF 435 (591)
Q Consensus 362 ~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~-----~~~~p~~~v~W~~~~~~~~~~-~~~ 435 (591)
.|+|.|.|..|.......|.|...+....+ .......+..|+.+.|.|. +.+.|.+.+.|++++..+... .++
T Consensus 95 ~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~ 173 (339)
T 3o4o_C 95 TYVCTTRNASYCDKMSIELRVFENTDAFLP-FISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKF 173 (339)
T ss_dssp EEECCEEETTEEEEEEEEEEEECSCGGGHH-HHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSE
T ss_pred EEEEEEECCcceEEEEEEEEEEcCCCcccc-ccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCcee
Confidence 999999999998888899999887654311 1112245788999999999 789999999999999888654 333
Q ss_pred EEEecCCeeEEEEeccCCCcceeEEEEEEcCCCc----cceEEEEEecCCC--CCCCCCe----eeeecCCeeEEEeecc
Q psy12425 436 HVETSERHAILTIRDASNVDTAPYRVVAENDLGM----DSAIVKIQISDRP--DPPQFPT----VEDIGHDSLALVWRAP 505 (591)
Q Consensus 436 ~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~----~~~~~~~~v~~~p--~~p~~~~----~~~~~~~~v~l~W~~p 505 (591)
.+ ......|.|.++...|.|.|+|.|.|..|. .+..+.|.|...+ .+|..+. +....+..+.|.|...
T Consensus 174 ~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~ 251 (339)
T 3o4o_C 174 LS--VRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVF 251 (339)
T ss_dssp EE--CTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEE
T ss_pred EE--cCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEE
Confidence 32 233468999999999999999999999884 4566777776543 1221111 1112355677777751
Q ss_pred ccCCCcc-eeeEEEEeeeCC------CCceEE-----e-cee---eeeEEEEcCcccCce-EEEEEEEEcCCcCCCCC
Q psy12425 506 IWDGGSN-ITNYIVEKREHP------MSSWIR-----V-GNT---RFTTMAITGLSPGHQ-YEFRVYAENVYGRSDPS 566 (591)
Q Consensus 506 ~~~~~~~-~~~y~v~~~~~~------~~~~~~-----~-~~~---~~~~~~i~~l~~~~~-Y~~~v~A~n~~G~~~~s 566 (591)
.. .+.+ ...+.+...... ...... . .++ -...|.|.++...+. +.|+|.|.|.+|.....
T Consensus 252 ~~-~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~ 328 (339)
T 3o4o_C 252 LG-TGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLR 328 (339)
T ss_dssp ES-SSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCB
T ss_pred CC-CCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEE
Confidence 10 1112 122222211100 000111 0 111 122799999999997 99999999999975544
No 114
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.90 E-value=3.2e-22 Score=167.21 Aligned_cols=175 Identities=19% Similarity=0.347 Sum_probs=141.1
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCC--eEEEEEcceecccceEEEEEEEe
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGD--TYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
+|.+...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..+...+. ..+|.|.++..+|+|.|+|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 3556666677788999999999999999999999999999887776665554443 35899999999999999999999
Q ss_pred CCcce-eeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCC-eEEEeeCCeEeeeccceEEEecCCeeEEE
Q psy12425 370 KGGVK-STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVETSERHAILT 447 (591)
Q Consensus 370 ~~g~~-~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~ 447 (591)
..|.. +....|.|..+|.+...+. ...+..|+.+.|.|.+.|.|.| .+.|++++..+..... ....|.
T Consensus 82 ~~~~~~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~ 151 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGVPFFTVEPK---DLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP-------SPSVLN 151 (182)
T ss_dssp CTTCEECCCEEEEEECSCEEEECCC---CEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE-------SSEEEE
T ss_pred CCCcEEEEEEEEEEecCCeEEecCc---ceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC-------CceEEE
Confidence 87754 5678899999888766543 3567889999999999999999 9999999988754321 578899
Q ss_pred EeccCCCcceeEEEEEEcCCCccc-eEEEEEe
Q psy12425 448 IRDASNVDTAPYRVVAENDLGMDS-AIVKIQI 478 (591)
Q Consensus 448 i~~~~~~~~g~y~c~a~n~~g~~~-~~~~~~v 478 (591)
|.++ +|+|.|+|.|.|..|... ..+.|.|
T Consensus 152 i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 152 VTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp ECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred Eecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 9888 588999999999999873 4777665
No 115
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.90 E-value=3.2e-22 Score=186.49 Aligned_cols=263 Identities=15% Similarity=0.146 Sum_probs=160.5
Q ss_pred ccccceeccccEEEEEEEcCCCC-----------CeeEEecCCccCCC-------CCceEEEEeCCeEEEEEcceecccc
Q psy12425 299 LRNANAIQNHNAQFQCTITGCPK-----------PTISWLKGSREITP-------SARHHIFAEGDTYTLIINSVYGVDA 360 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~p~-----------~~v~W~~~~~~~~~-------~~~~~~~~~~~~~~l~i~~~~~~d~ 360 (591)
..++.+.+|+.+.|.|.+.+.|. +.+.|++++..... .....+...+. +|.|.++..+|+
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~D~ 91 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKD--VLWFRPTLLNDT 91 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETT--EEEESSCCGGGC
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCC--EEEEccCChhhC
Confidence 45677899999999999998765 89999998742110 11222333333 799999999999
Q ss_pred eEEEEEEEeCCcceeeeeEEEEecCCcccCCCC-cccceeecCCCeEEEEEee-----eccCCCeEEEeeCCeEeeeccc
Q psy12425 361 DEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPR-FRDTAYFDKGENVVVKIPF-----TGYPKPKITWYRDNEVIESGGH 434 (591)
Q Consensus 361 g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~-~~~~~~~~~g~~~~l~c~~-----~~~p~~~v~W~~~~~~~~~~~~ 434 (591)
|.|+|.|.|..|.......|.|..+|....+.. ......+..|+.+.|.|.+ .|.|.+.+.|++++..+.....
T Consensus 92 G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~ 171 (349)
T 4dep_C 92 GNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNN 171 (349)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSS
T ss_pred EEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccc
Confidence 999999999999888889999988765443321 1223467889999999985 7889999999999998854332
Q ss_pred eEEEecCCeeEEEEeccCCCcceeEEEEEEcCC-Ccc---ceEEEEEecCCCC---CCCCC-----ee-eeecCCeeEEE
Q psy12425 435 FHVETSERHAILTIRDASNVDTAPYRVVAENDL-GMD---SAIVKIQISDRPD---PPQFP-----TV-EDIGHDSLALV 501 (591)
Q Consensus 435 ~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~-g~~---~~~~~~~v~~~p~---~p~~~-----~~-~~~~~~~v~l~ 501 (591)
+ .. ....|.|.++..+|+|.|+|.|.|.. |.. +..+.|.+..++. +|... .+ ....+..+.|.
T Consensus 172 ~--~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~ 247 (349)
T 4dep_C 172 V--IP--EGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIP 247 (349)
T ss_dssp E--EE--ETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCC
T ss_pred e--ee--cCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEE
Confidence 2 22 23689999999999999999999987 554 5677777765432 22111 10 11234456666
Q ss_pred eeccccCCCcceeeEEEEeeeCCC----CceE----E-----eceeeeeEEEEcCcccCce-EEEEEEEEcCCcCCCCCC
Q psy12425 502 WRAPIWDGGSNITNYIVEKREHPM----SSWI----R-----VGNTRFTTMAITGLSPGHQ-YEFRVYAENVYGRSDPST 567 (591)
Q Consensus 502 W~~p~~~~~~~~~~y~v~~~~~~~----~~~~----~-----~~~~~~~~~~i~~l~~~~~-Y~~~v~A~n~~G~~~~s~ 567 (591)
|.......+.+...+.+....... .... . ........+.|.++...+. +.|+|.|.|..|....+.
T Consensus 248 C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~ 327 (349)
T 4dep_C 248 CTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAA 327 (349)
T ss_dssp EEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEEC
T ss_pred EEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEE
Confidence 664321112122222222111000 0000 0 0112234589999999999 999999999999765543
No 116
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.90 E-value=7.5e-24 Score=219.14 Aligned_cols=373 Identities=14% Similarity=0.128 Sum_probs=212.2
Q ss_pred cceEEecCceEEEEecCCCCCCCcceeeEEEEEEec--------------CCCceEEEEeec----------CcceEEEc
Q psy12425 96 LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDI--------------SMPHWICISTTC----------HDTTFIVQ 151 (591)
Q Consensus 96 ~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~--------------~~~~~~~~~~~~----------~~~~~~i~ 151 (591)
+.+......++.|+|.+|...++..+.+|.|.++.. +...|....... ....+.+.
T Consensus 475 l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~ 554 (897)
T 2dtg_E 475 FSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMR 554 (897)
T ss_dssp CSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEEC
T ss_pred EEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccceEeC
Confidence 567888999999999998866777899999988765 234565432211 25779999
Q ss_pred CCcCCcEEEEEEEE-EccCCCCC-CCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEee
Q psy12425 152 GLTEGQEYLFHVMA-VNENGMGP-PLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKH 229 (591)
Q Consensus 152 ~l~~~~~y~~~~~a-~n~~g~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~ 229 (591)
+|.|++.|.|+|.| .|..|.+. .+..+..+...+...+|.+|..+.+.....+++.|+|.+|..+++ .+.+|.|.++
T Consensus 555 ~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG-~I~~Y~V~~~ 633 (897)
T 2dtg_E 555 GLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWE 633 (897)
T ss_dssp SCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSS-SCSEEECCEE
T ss_pred CCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCC-CeeEEEEEEE
Confidence 99999999999999 89888732 122334555666667888888888888889999999999865554 5899999887
Q ss_pred ecCCCccEEEEeeecCCceee-ecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccc
Q psy12425 230 EVGSDAWQRVNVAICAPSQIN-IPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNH 308 (591)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 308 (591)
........ ....+. ...+.++..|.+++.|.+..+.+............ ..+..++.+. .
T Consensus 634 ~~~~~~~~-------~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~-~~p~~p~~~~------~----- 694 (897)
T 2dtg_E 634 RQAEDSEL-------FELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECC-SCPKTDSQIL------K----- 694 (897)
T ss_dssp EECCCCSC-------TTCSSSCSCCCCCC---------------------------------------------------
T ss_pred ECCCCccc-------eecccccCCCcCCccccceeeecccccCcccccccccCCCcc-CCcCcccchh------h-----
Confidence 66543211 011222 23467889999999998876543321100000000 0000001000 0
Q ss_pred cEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcc
Q psy12425 309 NAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 388 (591)
Q Consensus 309 ~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~ 388 (591)
........+.|....... +.... + +...|....
T Consensus 695 -------~~~~~s~~~~W~~~~~n~----------------v~~~~--p-~~~r~~l~~--------------------- 727 (897)
T 2dtg_E 695 -------ELEESSFRKTFEDYLHNV----------------VFVPR--P-SRKRRSLGD--------------------- 727 (897)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------hhhhhheeeeEEEccCce----------------EEccC--C-Ccccccccc---------------------
Confidence 000112234553211000 00000 0 000000000
Q ss_pred cCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCC
Q psy12425 389 NVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLG 468 (591)
Q Consensus 389 ~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g 468 (591)
+ .+.. ... ..+.+........++|.+|.+...|.|++.|.|..|
T Consensus 728 -----------~-~n~t----------------------~~~--~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G 771 (897)
T 2dtg_E 728 -----------V-GNAG----------------------NNE--EHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDT 771 (897)
T ss_dssp --------------------------------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSS
T ss_pred -----------c-cccc----------------------Ccc--ccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCC
Confidence 0 0000 000 000011122446889999999999999999999998
Q ss_pred ccc---eEEEEEec-----CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEe----ceeee
Q psy12425 469 MDS---AIVKIQIS-----DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV----GNTRF 536 (591)
Q Consensus 469 ~~~---~~~~~~v~-----~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~----~~~~~ 536 (591)
... .+..+.+. .+|.+|..+.+...+.+++.|+|++|...+| .+.+|.|+|+......+... .....
T Consensus 772 ~g~~~s~s~~v~~~T~~~~~~p~~P~~l~~~~~~~~sv~LsW~~P~~~nG-~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~ 850 (897)
T 2dtg_E 772 PEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNG-LIVLYEVSYRRYGDEELHLCDTRKHFALE 850 (897)
T ss_dssp SSCCBCCCCCEEEECCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCSCSS-CEEEECCCCBSSSBCCCCCCCCSSSCCCT
T ss_pred CCCCCCCCceeEEeccCccCCCCCCcceEEEeCCCCEEEEEECCCCCCCC-CEEEEEEEEEECCCcceEEEEeeeeeccc
Confidence 643 12223332 2467888888888889999999999875555 69999999987654221111 13355
Q ss_pred eEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEE
Q psy12425 537 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 573 (591)
Q Consensus 537 ~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~ 573 (591)
+.++|.+|.|+ .|.|+|+|.|.+|.|++|....+.|
T Consensus 851 ~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T 886 (897)
T 2dtg_E 851 RGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYV 886 (897)
T ss_dssp TCCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECC
T ss_pred CcEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEe
Confidence 68899999999 6999999999999999998865533
No 117
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.90 E-value=2.1e-22 Score=194.06 Aligned_cols=307 Identities=11% Similarity=0.132 Sum_probs=179.5
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCC-CCC-e
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC-PKP-T 323 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~ 323 (591)
...|.|.+++..|.|.|+|.+.|..+..........+.+.... ..+|.+........+.+|+.+.|.|.+.|. |.+ .
T Consensus 78 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~ 156 (444)
T 1igt_B 78 TLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAK-TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVT 156 (444)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCC-CBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCE
T ss_pred eEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCC-CCCCceeEecccccCCCCCcEEEEEEEcceeCCCcE
Confidence 3589999999999999999999875431011122345554321 234555433333445889999999999884 776 9
Q ss_pred eEEecCCccCCCCCceEEEEeCC---eEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEe-----------------
Q psy12425 324 ISWLKGSREITPSARHHIFAEGD---TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM----------------- 383 (591)
Q Consensus 324 v~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~----------------- 383 (591)
+.|++++..+...........+. ...|.|.++..+| |.|+|.|.|..|.......+.+.
T Consensus 157 v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (444)
T 1igt_B 157 LTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNL 235 (444)
T ss_dssp EEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCC
T ss_pred EEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCccc
Confidence 99999877532110000111111 1368899999889 99999999998876444433221
Q ss_pred -cCCcc-cCCCCcccceeecCCCeEEEEEeeeccC----CCeEEEeeCCeEeeeccceE-EEe-c---CCeeEEEEeccC
Q psy12425 384 -TAPKF-NVPPRFRDTAYFDKGENVVVKIPFTGYP----KPKITWYRDNEVIESGGHFH-VET-S---ERHAILTIRDAS 452 (591)
Q Consensus 384 -~~p~~-~~~~~~~~~~~~~~g~~~~l~c~~~~~p----~~~v~W~~~~~~~~~~~~~~-~~~-~---~~~~~l~i~~~~ 452 (591)
.+|.+ ..++.. ...+..|+.+.|.|.+.|.+ .+.+.|++++..+....... ... . .....|.|.++.
T Consensus 236 ~~~p~v~~~~p~~--~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 313 (444)
T 1igt_B 236 LGGPSVFIFPPKI--KDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQD 313 (444)
T ss_dssp CCCCEEEEECCCH--HHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHH
T ss_pred CCCceEEecCCch--hheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHH
Confidence 12332 122211 11147899999999999884 36999999998775432111 111 1 124689999999
Q ss_pred CCcceeEEEEEEcCCCccceEEEEEe-cCCCCCCCCCeee-----eecCCeeEEEeeccccCCCcceeeEEEEeeeCCC-
Q psy12425 453 NVDTAPYRVVAENDLGMDSAIVKIQI-SDRPDPPQFPTVE-----DIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM- 525 (591)
Q Consensus 453 ~~~~g~y~c~a~n~~g~~~~~~~~~v-~~~p~~p~~~~~~-----~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~- 525 (591)
.+|.|.|+|.|.|..|.......+.. .....+|. +.+. .+..+.+.|.|........ ++ .|.|...+.
T Consensus 314 ~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~-v~~~~~~~~~~~~~~~~L~C~~~g~~P~-~~---~v~W~k~g~~ 388 (444)
T 1igt_B 314 WMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQ-VYVLPPPEEEMTKKQVTLTCMVTDFMPE-DI---YVEWTNNGKT 388 (444)
T ss_dssp HHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCE-EEEECCCGGGTTSSEEEEEEEEEEEBSS-CC---EEEEEETTEE
T ss_pred hccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCE-EEEeCCChHHccCCeEEEEEEEEeeeCC-CC---EEEEEECCEE
Confidence 99999999999999987744444422 12222232 1111 1233458888875221111 11 222222211
Q ss_pred -CceEE-----eceee---eeEEEEcCcccCceEEEEEEEEcCCc
Q psy12425 526 -SSWIR-----VGNTR---FTTMAITGLSPGHQYEFRVYAENVYG 561 (591)
Q Consensus 526 -~~~~~-----~~~~~---~~~~~i~~l~~~~~Y~~~v~A~n~~G 561 (591)
..... ..++. ...+.+......+.+.|+|+|.|..-
T Consensus 389 l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 389 ELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp CSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTS
T ss_pred ccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCc
Confidence 00000 11111 12344444444457899999999864
No 118
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.90 E-value=4.4e-22 Score=184.48 Aligned_cols=162 Identities=12% Similarity=0.163 Sum_probs=99.7
Q ss_pred eeccccEEEEEEEcCC-CC-CeeEEecCCccCCCCCceEEEEeCC----eEEEEEcceecccceEEEEEEEeCCcceeee
Q psy12425 304 AIQNHNAQFQCTITGC-PK-PTISWLKGSREITPSARHHIFAEGD----TYTLIINSVYGVDADEYVCRAVNKGGVKSTK 377 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~ 377 (591)
+.+|+.+.|.|.+.|. |. +.+.|++++..+...........++ ...|.|.++..+| |.|+|.|.|..+.....
T Consensus 132 ~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~ 210 (344)
T 1za6_B 132 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 210 (344)
T ss_dssp TTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEE
T ss_pred ccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccce
Confidence 3567788999999886 54 6999999887642110000111111 1268899988888 99999999998864333
Q ss_pred eEEE------------------------EecCCcccCCCCcccceeecCCCeEEEEEeeecc-C-CCeEEEeeCCeEeee
Q psy12425 378 AELI------------------------IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-P-KPKITWYRDNEVIES 431 (591)
Q Consensus 378 ~~l~------------------------v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p-~~~v~W~~~~~~~~~ 431 (591)
..+. +..+|.+...+.. .. ...|..+.|.|.+.|. | .+.+.|+++|..+..
T Consensus 211 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~--~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 287 (344)
T 1za6_B 211 KKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPS--RD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENN 287 (344)
T ss_dssp EEECCCCC--------------------CCBCCEEEEECCC--GG-GGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCS
T ss_pred EeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCC--hH-hccCCcEEEEEEEeeEECCCeEEEEEECCeECCC
Confidence 2221 1223433221110 11 1235669999999985 4 368999999988754
Q ss_pred ccceEEEecCC-----eeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 432 GGHFHVETSER-----HAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 432 ~~~~~~~~~~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
.....+....+ ...|.|.....+|.|.|+|.|.|....
T Consensus 288 ~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 288 YKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp EEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred cEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 32222211211 234556555556799999999998654
No 119
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.89 E-value=3.8e-22 Score=183.76 Aligned_cols=250 Identities=13% Similarity=0.110 Sum_probs=171.3
Q ss_pred cccceeccccEEEEEEEcCC---------CCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccce-EEEEEEEe
Q psy12425 300 RNANAIQNHNAQFQCTITGC---------PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDAD-EYVCRAVN 369 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~---------p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~c~a~n 369 (591)
..+.+.+|+.+.|.|.+.+. |.+.+.|++++..+....+. ...+ +|.|.+++.+|+| .|+|.|.|
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~~~~---~L~i~~v~~~D~Gs~Y~C~a~n 111 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--VKNG---DLWIANYTSNDSHRRYLCTVTT 111 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--EETT---EEEESSCCGGGGGCCEEEEEEC
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce--eecc---eEEEcCCChHhCCCcEEEEEEe
Confidence 45668999999999999874 66899999998776543333 2233 7999999999999 99999999
Q ss_pred CCcceeeeeEEEEec-CCcccCCCCcccceeecCCCeEEEEEeeeccC-CCeEEEeeCCeEeeec-cceEEEecCCeeEE
Q psy12425 370 KGGVKSTKAELIIMT-APKFNVPPRFRDTAYFDKGENVVVKIPFTGYP-KPKITWYRDNEVIESG-GHFHVETSERHAIL 446 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~-~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p-~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~l 446 (591)
..|.......+.+.. +|.+..++ ....+..|+.+.|.|.+.|.| .+.+.|++++..+... .++... ...|
T Consensus 112 ~~g~~~~~~~~~v~~~~p~~~~~~---~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~----~~~L 184 (329)
T 3oq3_B 112 KNGDCVQGIVRSHIRKPPSCIPET---YELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS----GQNL 184 (329)
T ss_dssp TTSCEEEEEEEEEECCCCSCEEEE---EETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE----TTEE
T ss_pred CCCceeeEEEEEEEcCCCcEeccc---cceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC----CCEE
Confidence 988754444334443 33322111 122356799999999999999 9999999999988532 233322 4789
Q ss_pred EEeccCCCcceeEEEEEEcC--CCccceE----EEEEecCCCCCC----CCCeeeeecCCeeEEEeeccccCCC-cceee
Q psy12425 447 TIRDASNVDTAPYRVVAEND--LGMDSAI----VKIQISDRPDPP----QFPTVEDIGHDSLALVWRAPIWDGG-SNITN 515 (591)
Q Consensus 447 ~i~~~~~~~~g~y~c~a~n~--~g~~~~~----~~~~v~~~p~~p----~~~~~~~~~~~~v~l~W~~p~~~~~-~~~~~ 515 (591)
.|.++..+|+|.|+|.|.|. .|..... +.|.|..+|... ....+....+..+.|.|........ .++
T Consensus 185 ~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i-- 262 (329)
T 3oq3_B 185 IIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDV-- 262 (329)
T ss_dssp EECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCC--
T ss_pred EEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCc--
Confidence 99999999999999999997 7665444 667787666321 1112233456678888886432110 111
Q ss_pred EEEEeeeCCCC-----c-e-EE---eceeeeeEEEEcCcccCceE-EEEEEEEcCCcCCC
Q psy12425 516 YIVEKREHPMS-----S-W-IR---VGNTRFTTMAITGLSPGHQY-EFRVYAENVYGRSD 564 (591)
Q Consensus 516 y~v~~~~~~~~-----~-~-~~---~~~~~~~~~~i~~l~~~~~Y-~~~v~A~n~~G~~~ 564 (591)
.+.|...+.. . . .. ........+.|.++...+.+ .|+|.|.|..|...
T Consensus 263 -~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~ 321 (329)
T 3oq3_B 263 -LIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKT 321 (329)
T ss_dssp -EEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEE
T ss_pred -EEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceE
Confidence 2333222111 0 0 00 01124578999999999999 99999999999643
No 120
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.89 E-value=3.5e-22 Score=168.28 Aligned_cols=182 Identities=24% Similarity=0.435 Sum_probs=142.8
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCC--CCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP--SARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
+|.+...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+..++ +|.|.++..+|+|.|+|.+.|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEEEEE
Confidence 56777777888899999999999999999999999999877653 3344443333 699999999999999999999
Q ss_pred CCcce--eeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEE
Q psy12425 370 KGGVK--STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILT 447 (591)
Q Consensus 370 ~~g~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~ 447 (591)
..+.. .....+.+..+|.+...+. .....+..|+.+.|.|.+.|.|.+.+.|+++|..+.....+.+. .....|.
T Consensus 79 ~~~~~~~~~~~~l~v~~~p~~~~~~~-~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~ 155 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNVPPAISMPQK-SFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELT 155 (189)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEECSCC-EEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEE--TTTTEEE
T ss_pred cCCCceEEEEEEEEecCCCCcccccc-cccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEe--cCCCEEE
Confidence 87544 3456677777776654332 12345678999999999999999999999999988776666544 3457899
Q ss_pred EeccCCCcceeEEEEEEcCCCccceEEEEEec
Q psy12425 448 IRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 448 i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 156 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 156 VRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 99999999999999999999998888877764
No 121
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.89 E-value=8.6e-20 Score=183.82 Aligned_cols=220 Identities=15% Similarity=0.139 Sum_probs=151.9
Q ss_pred eEEEEEcccCCCCceEEEEEEEcCCee-e--EEEEEEEEec---CCCCCCCCcceEEe--cCc---eEEEEecCCCCCCC
Q psy12425 50 YIIIFIKEIRKEDAGDYTVNLSNSSGS-V--SGTFTINITG---LPGPPIGPLDVSEI--TKH---TCTLHWNPPKYDGG 118 (591)
Q Consensus 50 ~~~l~i~~~~~~d~g~Y~c~~~n~~g~-~--~~~~~l~v~~---~p~~p~~~~~~~~~--~~~---~~~l~w~~p~~~~~ 118 (591)
...+.|.+|.+...|.|++.|.|..|. . +.+..+.... +|.+|.. +.+... ... ++.|+|.+|... +
T Consensus 222 ~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~-l~~~~~~~~~~g~~sv~l~W~pP~~~-~ 299 (680)
T 1zlg_A 222 DERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPAN-LRLANSTVNSDGSVTVTIVWDLPEEP-D 299 (680)
T ss_pred CCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCc-eEeeeeeecCCCceEEEEEecCCCCC-C
Confidence 357889999999999999999999883 2 2223333322 3444444 455555 566 999999988744 4
Q ss_pred cceeeEEEEEEec-------CCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCC
Q psy12425 119 LKVTHYVVERRDI-------SMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS 191 (591)
Q Consensus 119 ~~~~~y~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~ 191 (591)
.++.+|.|.+... ....|...........+.+.+|.+++.|.|+|.|.|..|.+..+.....+...+...+|.
T Consensus 300 g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~P~ 379 (680)
T 1zlg_A 300 IPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNN 379 (680)
T ss_pred CceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCCCC
Confidence 5889999999822 123566655555668899999999999999999999999987765533344444444555
Q ss_pred CCCCCeEEeecCCeEEE-----------EEecCCCCCCcceEEEEEEeeecCCCc-------------------cEEEEe
Q psy12425 192 PPGIPVVTQVGGDFVNL-----------SWDKPLDDGGSRIQGYWIDKHEVGSDA-------------------WQRVNV 241 (591)
Q Consensus 192 ~~~~~~~~~~~~~~v~l-----------~w~~~~~~~~~~~~~y~~~~~~~~~~~-------------------~~~~~~ 241 (591)
|..+........++.| +|..|...+ .+..|.+.+...+... |.....
T Consensus 380 -p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~~~--~~~~y~v~w~~~~~~~v~~Y~V~w~~~~~~~~~~~~~~~~~ 456 (680)
T 1zlg_A 380 -KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQD--GQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNRTTGSEASS 456 (680)
T ss_pred -ccccccccccCccccccccccCCCccccccCCcccC--CcceEEEEEeCCCCCccceEEEEEeeeecccCCCCcceeee
Confidence 5556666666666765 998875322 3556777776554321 111112
Q ss_pred eecCCceeeecCcccCCcEEEEEEEEcCCCCCC
Q psy12425 242 AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSL 274 (591)
Q Consensus 242 ~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~ 274 (591)
.......+.|.+|.+++.|.|++.|.|..|.+.
T Consensus 457 ~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~ 489 (680)
T 1zlg_A 457 GMTHENYIILQDLSFSCKYKVTVQPIRPKSHSK 489 (680)
T ss_pred eeccCceEEecCCCCCCeEEEEEEEecCCCCCC
Confidence 233457899999999999999999999988653
No 122
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.7e-22 Score=177.47 Aligned_cols=197 Identities=21% Similarity=0.323 Sum_probs=143.4
Q ss_pred CCCeEEeec----cccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCce-EEEEeCCeEEEEEcceecccceEEEE
Q psy12425 291 KAPEIIVPL----RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARH-HIFAEGDTYTLIINSVYGVDADEYVC 365 (591)
Q Consensus 291 ~~p~~~~~~----~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~c 365 (591)
.+|.+..+. ....+.+|+.+.|.|.+.+.|.+.+.|++++..+...... .........+|.|.++...|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 456665443 3567889999999999999999999999999887654332 11222334489999999999999999
Q ss_pred EEEeCCcceeeeeEEEEecCCcccC--CCCcccceeecCCCeEEEEEeeeccCCCeEEEee----CCeEeeeccceEEE-
Q psy12425 366 RAVNKGGVKSTKAELIIMTAPKFNV--PPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYR----DNEVIESGGHFHVE- 438 (591)
Q Consensus 366 ~a~n~~g~~~~~~~l~v~~~p~~~~--~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~----~~~~~~~~~~~~~~- 438 (591)
.+.|..|.......+.|...+.... .........+..|+.+.|.|.+.+.|.+.+.|++ ++..+.........
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 169 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTV 169 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeee
Confidence 9999999888888888876322110 0011234557889999999999999999999999 77766544332211
Q ss_pred -------ecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCC
Q psy12425 439 -------TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQF 487 (591)
Q Consensus 439 -------~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~ 487 (591)
.......|.|.++...|.|.|+|.|.|..|..+..+.|.|..+|.+|..
T Consensus 170 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~ 225 (241)
T 3grw_A 170 LKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEE 225 (241)
T ss_dssp EEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC---------
T ss_pred eeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCcc
Confidence 1124678999999999999999999999999999999999998877654
No 123
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.89 E-value=1.1e-20 Score=170.10 Aligned_cols=171 Identities=16% Similarity=0.240 Sum_probs=117.2
Q ss_pred EEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecC-CCceEEEEeecCcceEEEcCCcCCcEEEE
Q psy12425 83 INITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS-MPHWICISTTCHDTTFIVQGLTEGQEYLF 161 (591)
Q Consensus 83 l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~y~~ 161 (591)
+.....|.+|.. +.+......++.|+|.++. ..+..|.+.++... ...|...........+.+.+|.+++.|.|
T Consensus 9 ~~~~~~p~~P~~-l~~~~~~~~sv~l~W~~~~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 83 (283)
T 1tdq_A 9 GGGIPVIDGPTQ-ILVRDVSDTVAFVEWTPPR----AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEV 83 (283)
T ss_dssp ---CCSSCCCEE-EEEEEECSSCEEEEEECCS----SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEE
T ss_pred cccccCCCCCcE-EEEEecCCCeEEEEEECCC----CceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEE
Confidence 344456667766 6777788899999999876 36778999987543 34455555556788999999999999999
Q ss_pred EEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEe
Q psy12425 162 HVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV 241 (591)
Q Consensus 162 ~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 241 (591)
+|.|.|..|.+.... .... .+|.+|..+.+.....+++.|+|.++. ..+.+|.+.+...+...+.....
T Consensus 84 ~V~a~~~~g~s~~~~----~~~~---t~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~ 152 (283)
T 1tdq_A 84 SISAVRGTNESDASS----TQFT---TEIDAPKNLRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLV 152 (283)
T ss_dssp EEEEEETTEECCCEE----EEEE---CCCCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEETTCCCCEEEEE
T ss_pred EEEEECCCCCCCCee----EEEE---CCCCCCCceEEEecCCCeEEEEecCCC----CCccEEEEEEEeCCCCcceEEEC
Confidence 999999887764321 1111 256677778888888999999999863 36788999887765544433222
Q ss_pred eecC---CceeeecCcccCCcEEEEEEEEcCC
Q psy12425 242 AICA---PSQINIPNLIEGRQYEFRVYAQNEA 270 (591)
Q Consensus 242 ~~~~---~~~~~i~~l~~~~~~~y~c~a~n~~ 270 (591)
. .. ...+.+.+|.++..|.|++.|.|..
T Consensus 153 ~-~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 183 (283)
T 1tdq_A 153 P-KGIGPTTKTTLTDLVPGTEYGVGISAVMNS 183 (283)
T ss_dssp E-CCSSSEEEEEECSCCTTCEEEEEEEEEETT
T ss_pred C-CCCcccceEEEecCCCCCEEEEEEEEEeCC
Confidence 1 11 3455566666666666666665543
No 124
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.89 E-value=1.7e-21 Score=195.16 Aligned_cols=446 Identities=15% Similarity=0.121 Sum_probs=265.4
Q ss_pred ecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEE-------------EeCCeEEEEEc-ccCCCCceEEEEEEEcC
Q psy12425 8 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT-------------VLDDYIIIFIK-EIRKEDAGDYTVNLSNS 73 (591)
Q Consensus 8 ~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~-------------~~~~~~~l~i~-~~~~~d~g~Y~c~~~n~ 73 (591)
.++....|.|...+.....++|..+...- ....+.+. ..+......|. ++.+...+.|+|.|.|.
T Consensus 102 pP~~P~nl~c~~~~~~~~~~~W~~~~~~~-~~~~y~l~~~~~~~~~~~c~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~ 180 (589)
T 3l5h_A 102 PPEKPKNLSCIVNEGKKMRCEWDGGRETH-LETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENA 180 (589)
T ss_dssp CCCCCEEEEEEEETTSCEEEEEECCSCCS-SCEEEEECCBCSSSBCCCEECBTTBSSCCBCCSCCCSSSCEEECEEEEES
T ss_pred CCCCCEeeEEEECCCceEEEEECCCCcCC-cCceEEEEEEEcCCCcccCCCCCCCcEEEEECCCCchheeEEEEEEEEeC
Confidence 45677889999988778899998753210 00111111 01111234455 67788899999999999
Q ss_pred CeeeEE-EEEEEEe--cCCCCCCCCcce--EEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEe---ecCc
Q psy12425 74 SGSVSG-TFTINIT--GLPGPPIGPLDV--SEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST---TCHD 145 (591)
Q Consensus 74 ~g~~~~-~~~l~v~--~~p~~p~~~~~~--~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~---~~~~ 145 (591)
.|.... ...+... ..|.+|.. +.+ ......++.|+|.+|...++ .+..|.++++..+...|..+.. ....
T Consensus 181 ~G~~~s~~~~~~~~~~~~p~pP~~-~~~~~~~~~~~~v~l~W~~p~~~~~-~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~ 258 (589)
T 3l5h_A 181 LGKVTSDHINFDPVYKVKPNPPHN-LSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPEDTASTR 258 (589)
T ss_dssp SCCBCCCCEEECGGGSEECCCCCS-CEEECTTTCTTCEEEECCCCGGGGT-SCEEEEEEEEETTCSCCBCCCTTSSCSCC
T ss_pred CCCcccccEEEccccEEEcCCCce-EEEEecCCCCCeEEEEeCCCCCCCe-eeEEEEEEECCCCCCCcEEEccccCcCce
Confidence 998632 2333332 25677765 344 33567899999998875443 6788999999988777876532 2345
Q ss_pred ceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCC-CCCCCeEE----eecCCeEEEEEecCC-CCCCc
Q psy12425 146 TTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPS-PPGIPVVT----QVGGDFVNLSWDKPL-DDGGS 219 (591)
Q Consensus 146 ~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~----~~~~~~v~l~w~~~~-~~~~~ 219 (591)
..+.+.+|.+++.|.|+|+|.|..|.+..+..+..+...+....|. +|...... .....++.|.|.++. ...+.
T Consensus 259 ~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g 338 (589)
T 3l5h_A 259 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANG 338 (589)
T ss_dssp SEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCCCTTTSSS
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeecCcCCCcceEEEEEeeCCchhccC
Confidence 7899999999999999999999999888776666665555555553 34322222 345688999999742 33445
Q ss_pred ceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeec
Q psy12425 220 RIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPL 299 (591)
Q Consensus 220 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~ 299 (591)
.+.+|.+.+...+. .|... ......+++ +.++..|.|++.|.|..|.+..+..... ..+...+.++....
T Consensus 339 ~i~~Y~v~~~~~~~-~~~~~---~~~~~~~~~--l~~~~~Y~~~V~A~n~~G~~~~s~~~~~--~~~~~~~~p~~~l~-- 408 (589)
T 3l5h_A 339 KILDYEVTLTRWKS-HLQNY---TVNATKLTV--NLTNDRYLATLTVRNLVGKSDAAVLTIP--ACDFQATHPVMDLK-- 408 (589)
T ss_dssp CCCEEEEEECCTTS-CCCBC---CCSSSCCEE--CCCSSCCCEEEEEEBTTBCCCCCCCCCC--CTTCCCCSCCCSCE--
T ss_pred ceeeEEEEEecCCC-Cceee---ccCCceEEE--EeCCCCEEEEEEEEeCCccCCCeEEEee--cccccCCCCcceEE--
Confidence 78999999876544 23221 122334444 7799999999999999998876533211 11001111221110
Q ss_pred cccceeccccEEEEEEEcCC--CCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeee
Q psy12425 300 RNANAIQNHNAQFQCTITGC--PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTK 377 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~ 377 (591)
....+..+.|.|..... ..-.|.|...+...................+.+.+|.+...|.|++.|.|..|.....
T Consensus 409 ---~~~~~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~ 485 (589)
T 3l5h_A 409 ---AFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE 485 (589)
T ss_dssp ---EEECSSSEEEECCCCSSCCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSCCCSSSEEEEEECBEETTEECCCE
T ss_pred ---EEECCCeEEEEEECCCCCccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhccccCcEEEEEEEEEeCCcccCCE
Confidence 11225678888775432 1235667654332111111111122234456678999999999999999998877553
Q ss_pred eEEEEecCCcccCCCCcccceeecCCCeEEEEEee--eccCCCe-----EEEeeCCeEeeeccceEEEecCCeeEEEEec
Q psy12425 378 AELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF--TGYPKPK-----ITWYRDNEVIESGGHFHVETSERHAILTIRD 450 (591)
Q Consensus 378 ~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~--~~~p~~~-----v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 450 (591)
.+.+......+..+... .........+.|.+.. ...+... |.|...+ +.............++|.+
T Consensus 486 -~~~~~t~~~~P~~pp~l-~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~-----~~~~~~~~~~~~~~~~~~~ 558 (589)
T 3l5h_A 486 -SIKAYLKQAPPSKGPTV-RTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTII-----GNETAVNVDSSHTEYTLSS 558 (589)
T ss_dssp -EEEEESSCCCCSSCCCC-CEECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCSS-----CCCCCEEECTTCCBCCBCS
T ss_pred -EEEEEeccCCCCCCCeE-EEeecccceEEEEecCCCHHHcCccceeEEEEEEeCC-----CCeEEEEeCCcccEEEecC
Confidence 23333332222211111 1111223444444432 1111111 1111111 1111233445677889999
Q ss_pred cCCCcceeEEEEEEcCCCccceEEEEE
Q psy12425 451 ASNVDTAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 451 ~~~~~~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
|.+...|.|++.|.|..| +..+..+.
T Consensus 559 L~p~t~Y~~~V~A~n~~G-~~~S~~~~ 584 (589)
T 3l5h_A 559 LTSDTLYMVRMAAYTDEG-GKDGPEFT 584 (589)
T ss_dssp CCSSCCEECCEEEEETTE-EEECCCCE
T ss_pred CCCCCEEEEEEEEEeCCC-CCCCCCeE
Confidence 999999999999999999 54333333
No 125
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.89 E-value=1.5e-20 Score=169.83 Aligned_cols=262 Identities=24% Similarity=0.366 Sum_probs=184.1
Q ss_pred CCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecC-CCceEEEEeecCcceEEEcCCcCCcEEEEEEEEE
Q psy12425 88 LPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDIS-MPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAV 166 (591)
Q Consensus 88 ~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~ 166 (591)
.|.+|.. +.+......++.|+|.+|. ..+.+|.|.+.... ...|...........+.+.+|.+++.|.|+|.|.
T Consensus 20 ~p~~P~~-l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 94 (290)
T 3r8q_A 20 AIPAPTD-LKFTQVTPTSLSAQWTPPN----VQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYAL 94 (290)
T ss_dssp CCCCCEE-EEEEEECSSCEEEEEECCS----SCCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEEE
T ss_pred CCCCCCc-eEEEECCCCEEEEEEeCCC----CCeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEEE
Confidence 3444444 5667788999999999874 36888999998765 4566666666678899999999999999999999
Q ss_pred ccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCC
Q psy12425 167 NENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAP 246 (591)
Q Consensus 167 n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 246 (591)
|..|.+..+.. .+. .. ..+.+|..+.+......++.|+|.++ ...+.+|.+.+...+...+..... ....
T Consensus 95 ~~~g~s~~s~~--~~~--t~-~~~~~P~~l~~~~~~~~sv~l~W~~p----~~~~~~Y~v~~~~~~~~~~~~~~~-~~~~ 164 (290)
T 3r8q_A 95 KDTLTSRPAQG--VVT--TL-ENVSPPRRARVTDATETTITISWRTK----TETITGFQVDAVPANGQTPIQRTI-KPDV 164 (290)
T ss_dssp ETTEECCCEEE--EEE--CC-CCCCCCEEEEEEEECSSCEEEEEECC----SCCCCEEEEEEEESSSCCCEEEEE-CTTC
T ss_pred eCCCCCCCcce--eEe--cC-CCCCCCceeEEEEcCCCeEEEEEeCC----CCcccEEEEEEEECCCCcceEEec-CCCc
Confidence 99988776532 111 11 12356667778888899999999986 235778888877654333222211 1233
Q ss_pred ceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEE
Q psy12425 247 SQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISW 326 (591)
Q Consensus 247 ~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W 326 (591)
..+.+.+|.++..|.|++.|.|..|.+
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n~~g~s----------------------------------------------------- 191 (290)
T 3r8q_A 165 RSYTITGLQPGTDYKIYLYTLNDNARS----------------------------------------------------- 191 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEEC-----------------------------------------------------
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCccc-----------------------------------------------------
Confidence 455555555555555555555543321
Q ss_pred ecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeE
Q psy12425 327 LKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV 406 (591)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~ 406 (591)
T Consensus 192 -------------------------------------------------------------------------------- 191 (290)
T 3r8q_A 192 -------------------------------------------------------------------------------- 191 (290)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCC
Q psy12425 407 VVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQ 486 (591)
Q Consensus 407 ~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~ 486 (591)
.. ..+.....|.+|.
T Consensus 192 ----------------------------------------------------------------~~-~~~~~~t~p~~P~ 206 (290)
T 3r8q_A 192 ----------------------------------------------------------------SP-VVIDASTAIDAPS 206 (290)
T ss_dssp ----------------------------------------------------------------CC-EEEEEECCCCCCE
T ss_pred ----------------------------------------------------------------CC-EEEEecCCCCCCC
Confidence 10 1111123456666
Q ss_pred CCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEe--ceeeeeEEEEcCcccCceEEEEEEEEcCCcCCC
Q psy12425 487 FPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV--GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSD 564 (591)
Q Consensus 487 ~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~ 564 (591)
++.+...+.+++.|+|.+|. +.+.+|.|+++..+...|... .......+.|.+|.|++.|.|+|+|.|..|.|+
T Consensus 207 ~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~ 282 (290)
T 3r8q_A 207 NLRFLATTPNSLLVSWQPPR----ARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSE 282 (290)
T ss_dssp EEEEEEEETTEEEEEEECCS----SCCCEEEEEEECTTSCCEECSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred ccEEEeeCCCEEEEEEeCCC----CcccEEEEEEEeCCCCcceeEeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCC
Confidence 77777778899999999864 278999999998877666543 234667999999999999999999999999987
Q ss_pred CC
Q psy12425 565 PS 566 (591)
Q Consensus 565 ~s 566 (591)
+.
T Consensus 283 p~ 284 (290)
T 3r8q_A 283 PL 284 (290)
T ss_dssp CE
T ss_pred cc
Confidence 64
No 126
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.89 E-value=1.7e-22 Score=176.39 Aligned_cols=197 Identities=19% Similarity=0.307 Sum_probs=148.2
Q ss_pred CCCeEEeec----cccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEE-EEeCCeEEEEEcceecccceEEEE
Q psy12425 291 KAPEIIVPL----RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHI-FAEGDTYTLIINSVYGVDADEYVC 365 (591)
Q Consensus 291 ~~p~~~~~~----~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~c 365 (591)
.+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.. .......+|.|.++..+|+|.|+|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 93 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 93 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEE
Confidence 356665554 566788999999999999999999999999988765443311 122233479999999999999999
Q ss_pred EEEeCCcceeeeeEEEEecCCcccC--CCCcccceeecCCCeEEEEEeeeccCCCeEEEee----CCeEeeeccceEE--
Q psy12425 366 RAVNKGGVKSTKAELIIMTAPKFNV--PPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYR----DNEVIESGGHFHV-- 437 (591)
Q Consensus 366 ~a~n~~g~~~~~~~l~v~~~p~~~~--~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~----~~~~~~~~~~~~~-- 437 (591)
.+.|..|.......+.|...+.... .........+..|+.+.|.|.+.+.|.+.+.|++ +|..+........
T Consensus 94 ~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 173 (231)
T 3ojm_B 94 VVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKV 173 (231)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEE
T ss_pred EEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeE
Confidence 9999999888888888876443211 1111234567889999999999999999999999 7776643332111
Q ss_pred E-----ecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCC
Q psy12425 438 E-----TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQF 487 (591)
Q Consensus 438 ~-----~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~ 487 (591)
. .......|.|.++...|.|.|+|.|.|..|..+..+.|.|..+|.+|..
T Consensus 174 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~~ 228 (231)
T 3ojm_B 174 LKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPGR 228 (231)
T ss_dssp EEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-----
T ss_pred ecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCcc
Confidence 1 1123467999999999999999999999999999999999999988764
No 127
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.89 E-value=3e-22 Score=169.46 Aligned_cols=173 Identities=14% Similarity=0.195 Sum_probs=135.4
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCe-eEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
..|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+.... ..|.|.+++.+|+|.|+|.|.|
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n 75 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQL 75 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETT
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCC
Confidence 457777777777899999999999999988776 99999988775432 3799999999999999999987
Q ss_pred CCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeecc-CCCeEEEeeCCeEeeeccceEEEecCCeeEEEE
Q psy12425 370 KGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKPKITWYRDNEVIESGGHFHVETSERHAILTI 448 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i 448 (591)
+..+....|.|..+|.+...+. ..+.+|+.+.|.|.+.+. |.+.+.|+++|..+.. ......|.|
T Consensus 76 --~~~s~~~~l~V~~~p~~~~~~~----~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~--------~~~~~~L~i 141 (204)
T 3sgj_C 76 --STLSDPVQLEVHIGWLLLQAPR----WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY--------FHHNSDFYI 141 (204)
T ss_dssp --SBCCCCEEEEEECSSEEEECSC----SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE--------EEECCCEEE
T ss_pred --CcccccEEEEEecCceEecCCc----eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec--------ccCCceEEE
Confidence 3455677888888776654443 456789999999999765 6689999999987632 123568999
Q ss_pred eccCCCcceeEEEEEEc-CCCccceEEEEEecCCCCCCCC
Q psy12425 449 RDASNVDTAPYRVVAEN-DLGMDSAIVKIQISDRPDPPQF 487 (591)
Q Consensus 449 ~~~~~~~~g~y~c~a~n-~~g~~~~~~~~~v~~~p~~p~~ 487 (591)
.++..+|+|.|+|.|.| ..+..+..+.|.|..+|..|..
T Consensus 142 ~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P~i 181 (204)
T 3sgj_C 142 PKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVSTI 181 (204)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-------
T ss_pred CcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCCCCcc
Confidence 99999999999999999 5556688889999888766653
No 128
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.89 E-value=2.3e-21 Score=177.60 Aligned_cols=261 Identities=13% Similarity=0.135 Sum_probs=168.5
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+. ..+.+|+.+.|.|.+.+. .+.+.|++++..+...... ......|.|.+++.+|+|.|+|.|.|.
T Consensus 23 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~----~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 96 (316)
T 3vh8_G 23 DKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHG----RIFQESFNMSPVTTAHAGNYTCRGSHP 96 (316)
T ss_dssp -CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHH----CCBSSCEEECSCCGGGCEEEEEEEBCS
T ss_pred CCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecC----CcceEEEEECCCCcccCeEEEEEEEcC
Confidence 5788877766 568899999999999888 6789999998775431110 111236999999999999999999874
Q ss_pred Cc-----ceeeeeEEEEecC---CcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccce-EEEecC
Q psy12425 371 GG-----VKSTKAELIIMTA---PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHF-HVETSE 441 (591)
Q Consensus 371 ~g-----~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~ 441 (591)
.+ ..+....|.|... |.+...+ ...+..|+.+.|.|.+. .+.+.+.|++++..+...... ......
T Consensus 97 ~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~----~~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~ 171 (316)
T 3vh8_G 97 HSPTGWSAPSNPVVIMVTGNHRKPSLLAHP----GPLVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGV 171 (316)
T ss_dssp SSSSSBCCCCCCEEEEEECSSCCCEEEEES----CSEEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTE
T ss_pred CCCcceecCCCcEEEEEecCCCCCeEEecC----CCccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCC
Confidence 32 2344566777553 2232222 12367899999999994 567799999998876432211 122223
Q ss_pred CeeEEEEeccCCCcceeEEEEEEcCCCcc-----ceEEEEEecCCCCCCCCCee----eeecCCeeEEEeeccccCCCcc
Q psy12425 442 RHAILTIRDASNVDTAPYRVVAENDLGMD-----SAIVKIQISDRPDPPQFPTV----EDIGHDSLALVWRAPIWDGGSN 512 (591)
Q Consensus 442 ~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-----~~~~~~~v~~~p~~p~~~~~----~~~~~~~v~l~W~~p~~~~~~~ 512 (591)
....|.|.++..+|+|.|+|.|.|..|.. +..+.+.|...+.+|.. .+ ....+..++|.|... . +
T Consensus 172 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i-~~~~~~~v~~G~~v~L~C~~~---~--~ 245 (316)
T 3vh8_G 172 SKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSL-SAQPGPKVQAGESVTLSCSSR---S--S 245 (316)
T ss_dssp EEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEE-EEESCSCCCTTSCCEEEEEES---S--C
T ss_pred ceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeE-EeCCCCeecCCCcEEEEEECC---C--C
Confidence 56789999999999999999999998852 56667777765444421 11 113467899999863 1 2
Q ss_pred eeeEEEEeeeCCCCceEE----eceeeeeEEEEcCcccCceEEEEEEEEcCCcC---CCCCCCcc
Q psy12425 513 ITNYIVEKREHPMSSWIR----VGNTRFTTMAITGLSPGHQYEFRVYAENVYGR---SDPSTTSD 570 (591)
Q Consensus 513 ~~~y~v~~~~~~~~~~~~----~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~---~~~s~~~~ 570 (591)
...|.+............ ........|.|.++. +.+.|+|.|.|..|. +..|....
T Consensus 246 ~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~ 308 (316)
T 3vh8_G 246 YDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLL 308 (316)
T ss_dssp CSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEE
T ss_pred CcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEE
Confidence 233443332211111111 122334689999998 899999999998875 34555443
No 129
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.88 E-value=1.2e-20 Score=161.79 Aligned_cols=85 Identities=25% Similarity=0.347 Sum_probs=70.3
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEee-cCCceeEEEe-CCeEEEEEcccCC-CCceEEEEEEEcCCee-e
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ-SDDRFKFTVL-DDYIIIFIKEIRK-EDAGDYTVNLSNSSGS-V 77 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~-~~~~~~~~~~-~~~~~l~i~~~~~-~d~g~Y~c~~~n~~g~-~ 77 (591)
|.++.+.+|+++.|.|.+.|.|.+.+.|+|+|..+. ...++.+... ++..+|.|.+++. +|+|.|+|.+.|..|. .
T Consensus 13 p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~ 92 (212)
T 2yd1_A 13 PQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAV 92 (212)
T ss_dssp CCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEE
T ss_pred CCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeE
Confidence 677899999999999999999999999999999987 4466666544 4447999999999 9999999999998776 4
Q ss_pred EEEEEEEEe
Q psy12425 78 SGTFTINIT 86 (591)
Q Consensus 78 ~~~~~l~v~ 86 (591)
+..+.|.|.
T Consensus 93 ~~~~~l~V~ 101 (212)
T 2yd1_A 93 SADATLTIY 101 (212)
T ss_dssp EEEEEEEEE
T ss_pred EeeEEEEEe
Confidence 455555554
No 130
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.88 E-value=1.4e-20 Score=181.93 Aligned_cols=227 Identities=12% Similarity=0.166 Sum_probs=141.6
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCC--------C-CCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEE
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGL--------S-LPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTI 316 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~--------~-~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~ 316 (591)
...|.|.+++..|.|.|+|.|.|..|. . ........+.+... ...+|.+........+.+|+.+.|.|.+
T Consensus 78 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~-~~~~P~i~~~~~~~~~~~g~~v~L~C~~ 156 (457)
T 1hzh_H 78 TAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSA-STKGPSVFPLAPSSKSTSGGTAALGCLV 156 (457)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSC-CCBCCEEEEECCCSCCCTTCCEEEEEEE
T ss_pred EEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCC-CCCCCeEEecCccccccCCCcEEEEEEE
Confidence 357999999999999999999987651 0 01112334555431 1235665554444557899999999999
Q ss_pred cCC-CC-CeeEEecCCccCCCCCceEEEEeCC----eEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEec------
Q psy12425 317 TGC-PK-PTISWLKGSREITPSARHHIFAEGD----TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMT------ 384 (591)
Q Consensus 317 ~~~-p~-~~v~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~------ 384 (591)
.+. |. +.+.|++++..+...........++ ...|.|.++..+| |.|+|.|.|..+.......+.+..
T Consensus 157 ~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~ 235 (457)
T 1hzh_H 157 KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHT 235 (457)
T ss_dssp ESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCS
T ss_pred eEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccc
Confidence 986 64 7999999886543111111111222 1368999999999 999999999877654443333221
Q ss_pred -----------CCcc-cCCCCcccceeecCCCeEEEEEeeeccCCC----eEEEeeCCeEeeeccceEEEecCCeeEEEE
Q psy12425 385 -----------APKF-NVPPRFRDTAYFDKGENVVVKIPFTGYPKP----KITWYRDNEVIESGGHFHVETSERHAILTI 448 (591)
Q Consensus 385 -----------~p~~-~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~----~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i 448 (591)
+|.+ ..++.. ...+..|+.+.|.|.+.|.|++ .+.|++++..+........... ....|.+
T Consensus 236 ~~~~~~~~~~~~p~v~~~~p~~--~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~-~~g~~~~ 312 (457)
T 1hzh_H 236 CPPCPAPELLGGPSVFLFPPKP--KDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQ-YNSTYRV 312 (457)
T ss_dssp CCSCCCCCCSSSCEEEEECCCH--HHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEEC-TTSCEEE
T ss_pred cCCCCCccccCCceEEeECcCc--hhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceec-CCCcEEE
Confidence 2222 111111 1114679999999999998653 9999999988753322111111 1122322
Q ss_pred e---ccCCCc---ceeEEEEEEcCCCccceEEEEE
Q psy12425 449 R---DASNVD---TAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 449 ~---~~~~~~---~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
. .+...| .|.|+|.|.|..+.......+.
T Consensus 313 ~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~ 347 (457)
T 1hzh_H 313 VSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTIS 347 (457)
T ss_dssp EEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEEC
T ss_pred EEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEE
Confidence 2 233445 9999999998866654444443
No 131
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.88 E-value=7.7e-23 Score=187.72 Aligned_cols=255 Identities=16% Similarity=0.193 Sum_probs=171.8
Q ss_pred ccceeccccEEEEEEEcCCC-CCeeEEecCCccCC----CCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCccee
Q psy12425 301 NANAIQNHNAQFQCTITGCP-KPTISWLKGSREIT----PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 375 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p-~~~v~W~~~~~~~~----~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~ 375 (591)
.+.+.+|+.+.|.|.+.+.| .+.+.|++++..+. ...++.. .+. +|.|.++..+|+|.|+|.|.|..|...
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~--~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 89 (315)
T 1itb_B 14 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQ--HKE--KLWFVPAKVEDSGHYYCVVRNSSYCLR 89 (315)
T ss_dssp CCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEE--CSS--BEECTTCCGGGCSCCEECCCSSSCCCC
T ss_pred EEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEec--cCC--eEEECCCChhhCEEEEEEEeCCceEEE
Confidence 45678999999999999987 78999999886432 1223332 222 799999999999999999999988777
Q ss_pred eeeEEEEec-CCcccCCCCcccceeecCCCeEEEEEee------eccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEE
Q psy12425 376 TKAELIIMT-APKFNVPPRFRDTAYFDKGENVVVKIPF------TGYPKPKITWYRDNEVIESGGHFHVETSERHAILTI 448 (591)
Q Consensus 376 ~~~~l~v~~-~p~~~~~~~~~~~~~~~~g~~~~l~c~~------~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i 448 (591)
....+.+.. +|.+...+.......+..|+.+.|.|.+ .|.|.+.+.|++++..+....... .. ....|.|
T Consensus 90 ~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~-~~--~~~~L~i 166 (315)
T 1itb_B 90 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF-SG--VKDRLIV 166 (315)
T ss_dssp EECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSE-EE--ETTEEEE
T ss_pred EEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceE-ee--cCceEEE
Confidence 666666543 4444333332233567889999999998 899999999999999886533222 21 2458999
Q ss_pred eccCCCcceeEEEEEE-cCCCcc---ceEEEEEecCC--CCCCCCC-----eeeeecCCeeEEEeeccccCCCcceeeEE
Q psy12425 449 RDASNVDTAPYRVVAE-NDLGMD---SAIVKIQISDR--PDPPQFP-----TVEDIGHDSLALVWRAPIWDGGSNITNYI 517 (591)
Q Consensus 449 ~~~~~~~~g~y~c~a~-n~~g~~---~~~~~~~v~~~--p~~p~~~-----~~~~~~~~~v~l~W~~p~~~~~~~~~~y~ 517 (591)
.++...|+|.|+|.|. |..|.. +..+.+.+..+ +.+|... .+....+..+.|.|....... ..+.+|.
T Consensus 167 ~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~-p~i~W~~ 245 (315)
T 1itb_B 167 MNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLS-DIAYWKW 245 (315)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTT-SEEEEEE
T ss_pred EeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCC-CeeEEEE
Confidence 9999999999999999 788876 33444434321 2333221 123345677889888632111 1122221
Q ss_pred EEeeeCCC-C-----ceEEece-------eeeeEEEEcCcccCc-eEEEEEEEEcCCcCCC
Q psy12425 518 VEKREHPM-S-----SWIRVGN-------TRFTTMAITGLSPGH-QYEFRVYAENVYGRSD 564 (591)
Q Consensus 518 v~~~~~~~-~-----~~~~~~~-------~~~~~~~i~~l~~~~-~Y~~~v~A~n~~G~~~ 564 (591)
....... . .+..... .....|.|.++...+ .+.|+|.|.|.+|...
T Consensus 246 -~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~ 305 (315)
T 1itb_B 246 -NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDA 305 (315)
T ss_dssp -TTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEE
T ss_pred -CCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCcee
Confidence 1111111 1 1111111 234589999999999 9999999999999654
No 132
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.88 E-value=8.5e-22 Score=169.41 Aligned_cols=180 Identities=17% Similarity=0.336 Sum_probs=139.3
Q ss_pred eEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccC------------CCCCceEEEEeCCeEEEEEcceecccce
Q psy12425 294 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREI------------TPSARHHIFAEGDTYTLIINSVYGVDAD 361 (591)
Q Consensus 294 ~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 361 (591)
.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++.+.. .+|.|.++..+|+|
T Consensus 3 ~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~G 78 (212)
T 1f97_A 3 SVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDNG 78 (212)
T ss_dssp EEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGCE
T ss_pred eEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccCe
Confidence 4445556777899999999999999999999999987652 1123333322 37999999999999
Q ss_pred EEEEEEEeCCc--ceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEe-eeccCCCeEEEeeCCe-Eeeeccc---
Q psy12425 362 EYVCRAVNKGG--VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIP-FTGYPKPKITWYRDNE-VIESGGH--- 434 (591)
Q Consensus 362 ~y~c~a~n~~g--~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~-~~~~p~~~v~W~~~~~-~~~~~~~--- 434 (591)
.|+|.|.|..| .....+.|.|..+|.+...+ ....+..|+.+.|.|. +.+.|.+.+.|++++. .+.....
T Consensus 79 ~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~---~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~ 155 (212)
T 1f97_A 79 EYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTIS---VPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTR 155 (212)
T ss_dssp EEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEE---CCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CB
T ss_pred EEEEEEEccCCCcccEEEEEEEEEcCCCCcccC---CccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccc
Confidence 99999999977 44667888888887764332 2245788999999999 7999999999999998 7754332
Q ss_pred ----eEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc--ceEEEEEecC
Q psy12425 435 ----FHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD--SAIVKIQISD 480 (591)
Q Consensus 435 ----~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~--~~~~~~~v~~ 480 (591)
...........|.|.++..+|.|.|+|.|.|..|.. +..+.|.|.+
T Consensus 156 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 156 AFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp SCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred cccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 122333456789999999999999999999999998 6677777765
No 133
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.88 E-value=5.6e-21 Score=161.98 Aligned_cols=183 Identities=22% Similarity=0.338 Sum_probs=143.8
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecC-CceeEEE-eCCeEEEEEcccCCCCceEEEEEEEcCCeeeEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD-DRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~ 79 (591)
|..+.+.+|+++.|.|.+.+.|.+.+.|+|++..+... .++++.. .+....|.|.+++.+|+|.|+|.+.|..|....
T Consensus 11 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~ 90 (197)
T 2j8h_A 11 LRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSG 90 (197)
T ss_dssp CCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEE
T ss_pred CCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeE
Confidence 56789999999999999999999999999999998764 4555543 445579999999999999999999998877665
Q ss_pred EEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEE
Q psy12425 80 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEY 159 (591)
Q Consensus 80 ~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 159 (591)
.+.|.|...|..
T Consensus 91 ~~~l~V~~~p~~-------------------------------------------------------------------- 102 (197)
T 2j8h_A 91 TASLEVEVPAKI-------------------------------------------------------------------- 102 (197)
T ss_dssp EEEEEEEEEEEE--------------------------------------------------------------------
T ss_pred EEEEEEcCCCcC--------------------------------------------------------------------
Confidence 555555310000
Q ss_pred EEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEE
Q psy12425 160 LFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRV 239 (591)
Q Consensus 160 ~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 239 (591)
..+
T Consensus 103 ---------------------------------------------------~~~-------------------------- 105 (197)
T 2j8h_A 103 ---------------------------------------------------HLP-------------------------- 105 (197)
T ss_dssp ---------------------------------------------------CCS--------------------------
T ss_pred ---------------------------------------------------CCC--------------------------
Confidence 000
Q ss_pred EeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCC
Q psy12425 240 NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC 319 (591)
Q Consensus 240 ~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~ 319 (591)
.+...+....+..|+.+.|.|.+.+.
T Consensus 106 ------------------------------------------------------~~~~~~~~~~~~~g~~~~l~C~~~g~ 131 (197)
T 2j8h_A 106 ------------------------------------------------------KTLEGMGAVHALRGEVVSIKIPFSGK 131 (197)
T ss_dssp ------------------------------------------------------SCBTTBEEEEEETTCCCEEEEEEEEE
T ss_pred ------------------------------------------------------ccccccCeEEEeCCCEEEEEEEEEec
Confidence 00000011235677888999999999
Q ss_pred CCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcc-eecccceEEEEEEEeCCcceeeeeEEEEe
Q psy12425 320 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINS-VYGVDADEYVCRAVNKGGVKSTKAELIIM 383 (591)
Q Consensus 320 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 383 (591)
|.+.+.|++++..+....++.+...+...+|.|.+ +...|.|.|+|.|.|..|.....+.|.|.
T Consensus 132 p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 132 PDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp SCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 99999999999998887888887777778999999 99999999999999999998888888775
No 134
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.88 E-value=1.4e-21 Score=177.35 Aligned_cols=254 Identities=14% Similarity=0.167 Sum_probs=175.3
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+....+.+|+.+.|.|.+.+. +.|++++.. ...+...+...+|.|.+++..|+|.|+|.|.|.
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 73 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTEPGD 73 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECCCC-
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEEccC
Confidence 57888888888889999999999999884 999965432 334444555679999999999999999999999
Q ss_pred CcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCC--CeEEEeeC-CeEeeeccceEEEecCCeeEEE
Q psy12425 371 GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK--PKITWYRD-NEVIESGGHFHVETSERHAILT 447 (591)
Q Consensus 371 ~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~--~~v~W~~~-~~~~~~~~~~~~~~~~~~~~l~ 447 (591)
.|.....+.|.|..+|...... .....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+.....+.+. ....|.
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~~~--~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~---~~~~L~ 147 (292)
T 4dkd_C 74 PLGGSAAIHLYVKDPARPWNVL--AQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFS---PWHGFT 147 (292)
T ss_dssp ---CCEEECCEECCSSCCEEES--CSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECC---SSSCCE
T ss_pred CCCcceEEEEEEcCcccccccc--CCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCccccc---CCceEE
Confidence 8888888899998877542211 23456789999999999987 44 78999997 5555444444332 233499
Q ss_pred EeccCCCcceeEEEEEEcCCCcc-ceEEEEEecCCCC-CCCCCeee-----eecCCeeEEEeeccccCCCcceeeEEEEe
Q psy12425 448 IRDASNVDTAPYRVVAENDLGMD-SAIVKIQISDRPD-PPQFPTVE-----DIGHDSLALVWRAPIWDGGSNITNYIVEK 520 (591)
Q Consensus 448 i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p~-~p~~~~~~-----~~~~~~v~l~W~~p~~~~~~~~~~y~v~~ 520 (591)
|.++...|.|.|+|.|.|..|.. +..+.+.|...+. +|. +... ...+..+.|.|.... ..+ .+.+.|
T Consensus 148 i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~-i~~~~~~~~~~~g~~v~l~C~~~~---~~~--~~~~~w 221 (292)
T 4dkd_C 148 IHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPA-LTLVPAELVRIRGEAAQIVCSASS---VDV--NFDVFL 221 (292)
T ss_dssp ETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCE-EEEESSCBCCCSSSCEEEEEEEEE---SSS--CCEEEC
T ss_pred ECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCe-EEccCCceeEecCCCEEEEEEecC---CCC--ceEEEE
Confidence 99999999999999999988865 4577888876332 222 1111 124677889988531 111 223333
Q ss_pred eeCCCC----ceEEe-c--eeeeeEEEEcCcccCceEEEEEEEEcCCcCCCC
Q psy12425 521 REHPMS----SWIRV-G--NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDP 565 (591)
Q Consensus 521 ~~~~~~----~~~~~-~--~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~ 565 (591)
...+.. .-... . ......+.|.++...+.+.|+|.|.|..|....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 273 (292)
T 4dkd_C 222 QHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHST 273 (292)
T ss_dssp CBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEE
T ss_pred eCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCcee
Confidence 322211 00111 1 123358999999999999999999999997543
No 135
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.87 E-value=1.2e-19 Score=176.26 Aligned_cols=308 Identities=11% Similarity=0.122 Sum_probs=174.4
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCC---CCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCC-CC
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSL---PSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC-PK 321 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~---~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~-p~ 321 (591)
...|.|.+++..|.|.|.|.+.+..|... .......+.+... ...+|.+..... ..+.+|+.+.|.|.+.|. |.
T Consensus 79 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~-~~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~ 156 (475)
T 1iga_A 79 TAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSA-SPTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQ 156 (475)
T ss_pred eEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccC-CCcCCeEEecCc-cccCCCCeEEEEEEEeeecCC
Confidence 35799999999999999999999765210 1112234444421 123455543322 223689999999999986 65
Q ss_pred -C-eeEEecCCccCCCCCceEEE-EeCC----eEEEEEcceecccceEEEEEEEeCCcce-eeeeEEEEe----------
Q psy12425 322 -P-TISWLKGSREITPSARHHIF-AEGD----TYTLIINSVYGVDADEYVCRAVNKGGVK-STKAELIIM---------- 383 (591)
Q Consensus 322 -~-~v~W~~~~~~~~~~~~~~~~-~~~~----~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~~l~v~---------- 383 (591)
+ .|.|++++..........+. ..++ ...|.|..+...|.|.|+|.|.|..+.. ...+.+.|.
T Consensus 157 ~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~ 236 (475)
T 1iga_A 157 EPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPST 236 (475)
T ss_pred CceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccc
Confidence 4 99999887532111000011 1111 1257888888899999999999988742 222222221
Q ss_pred --------cCCcc-cCCCCcccceeecCCCeEEEEEeeeccCC---CeEEEeeCCeEeeeccceE-EEe-cC---CeeEE
Q psy12425 384 --------TAPKF-NVPPRFRDTAYFDKGENVVVKIPFTGYPK---PKITWYRDNEVIESGGHFH-VET-SE---RHAIL 446 (591)
Q Consensus 384 --------~~p~~-~~~~~~~~~~~~~~g~~~~l~c~~~~~p~---~~v~W~~~~~~~~~~~~~~-~~~-~~---~~~~l 446 (591)
.+|.+ ..++. ...+..|+.+.|.|.+.|.++ +.|.| . +..+....... ... .+ ....|
T Consensus 237 ~~~~~~~~~~p~v~~~~p~---~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L 311 (475)
T 1iga_A 237 PPTPSPSCCHPRLSLHRPA---LEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVL 311 (475)
T ss_pred cccCCCCCCCcEEEEcCCC---hHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEE
Confidence 12222 11111 112478999999999998754 69999 4 33332111111 111 11 34579
Q ss_pred EEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCCCeeee------ecCCeeEEEeeccccCC-CcceeeEEEE
Q psy12425 447 TIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVED------IGHDSLALVWRAPIWDG-GSNITNYIVE 519 (591)
Q Consensus 447 ~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~------~~~~~v~l~W~~p~~~~-~~~~~~y~v~ 519 (591)
.|.++..+|.|.|+|.|.|..|.......+.+.....+|. +.+.. ..+..+.|.|....+.. ...+.+|+-
T Consensus 312 ~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~-v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~- 389 (475)
T 1iga_A 312 PGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPE-VHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQG- 389 (475)
T ss_pred EEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCe-EEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEEC-
Confidence 9999999999999999999999875555554322222332 11111 12445888887532111 112222221
Q ss_pred eeeCCCCceE-----Ee---cee---eeeEEEEcCcccCceEEEEEEEEcCCcC
Q psy12425 520 KREHPMSSWI-----RV---GNT---RFTTMAITGLSPGHQYEFRVYAENVYGR 562 (591)
Q Consensus 520 ~~~~~~~~~~-----~~---~~~---~~~~~~i~~l~~~~~Y~~~v~A~n~~G~ 562 (591)
.......... .. .++ ....+.|......+.+.|+|.|.|....
T Consensus 390 g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 390 SQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred CEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 1111111100 00 111 1234556666656689999999998764
No 136
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.87 E-value=5.6e-20 Score=157.51 Aligned_cols=189 Identities=20% Similarity=0.248 Sum_probs=138.8
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEe-CCeEEEEEccc-CCCCceEEEEEEEcCCeeeEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL-DDYIIIFIKEI-RKEDAGDYTVNLSNSSGSVSG 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~-~~~d~g~Y~c~~~n~~g~~~~ 79 (591)
|.++.+.+|+++.|.|.+.|.|.+.+.|+|+|..+.......+... +....|.|.++ +.+|+|.|+|.|.|..|....
T Consensus 13 p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~ 92 (212)
T 2yd6_A 13 PVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISV 92 (212)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEE
T ss_pred cceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEE
Confidence 6788999999999999999999999999999999876543333332 34578999999 599999999999998887666
Q ss_pred EEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEE
Q psy12425 80 TFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEY 159 (591)
Q Consensus 80 ~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y 159 (591)
.+.|.|...+..|
T Consensus 93 ~~~l~V~~~~~~~------------------------------------------------------------------- 105 (212)
T 2yd6_A 93 STRLTVLREDQIP------------------------------------------------------------------- 105 (212)
T ss_dssp EEEEEEECGGGCC-------------------------------------------------------------------
T ss_pred EEEEEEeccCccC-------------------------------------------------------------------
Confidence 6666654311000
Q ss_pred EEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEE
Q psy12425 160 LFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRV 239 (591)
Q Consensus 160 ~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 239 (591)
+
T Consensus 106 ------------------------------~------------------------------------------------- 106 (212)
T 2yd6_A 106 ------------------------------R------------------------------------------------- 106 (212)
T ss_dssp ------------------------------T-------------------------------------------------
T ss_pred ------------------------------C-------------------------------------------------
Confidence 0
Q ss_pred EeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCC
Q psy12425 240 NVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC 319 (591)
Q Consensus 240 ~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~ 319 (591)
..|.+...+....+..|+.+.|.|.+.|.
T Consensus 107 ---------------------------------------------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~ 135 (212)
T 2yd6_A 107 ---------------------------------------------------GFPTIDMGPQLKVVERTRTATMLCAASGN 135 (212)
T ss_dssp ---------------------------------------------------TCCEEEECCCCEEEETTSCEEEEEEEECS
T ss_pred ---------------------------------------------------CcceeecCCcceeEecCCCEEEEEEecCC
Confidence 00111111112235567889999999999
Q ss_pred CCCeeEEecCCccCCCC---CceEEEEeCCeEEEEEcceecccceEEEEEEEeCCccee-eeeEEEEecCCc
Q psy12425 320 PKPTISWLKGSREITPS---ARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS-TKAELIIMTAPK 387 (591)
Q Consensus 320 p~~~v~W~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~-~~~~l~v~~~p~ 387 (591)
|.+.+.|++++..+... .++.....+....|.|.++..+|.|.|+|.|.|..|... ..+.|.+..++.
T Consensus 136 p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~~ 207 (212)
T 2yd6_A 136 PDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTKH 207 (212)
T ss_dssp SCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred CCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEeccc
Confidence 99999999999887654 455566666678999999999999999999999999874 457777766553
No 137
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.87 E-value=3.4e-21 Score=166.09 Aligned_cols=186 Identities=24% Similarity=0.419 Sum_probs=142.0
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCC--ceEEEEeCCeE--EEEEcceecccceEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA--RHHIFAEGDTY--TLIINSVYGVDADEYVC 365 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~--~l~i~~~~~~d~g~y~c 365 (591)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...+...++.. .+.|.+++..|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 468888888888889999999999999999999999999998876542 22222222221 23688999999999999
Q ss_pred EEEeCCcce-eeeeEEEEec-CCcccCCCCcccceeecCCCeEEEEEee-eccCCCeEEEeeCCeEeeecc--------c
Q psy12425 366 RAVNKGGVK-STKAELIIMT-APKFNVPPRFRDTAYFDKGENVVVKIPF-TGYPKPKITWYRDNEVIESGG--------H 434 (591)
Q Consensus 366 ~a~n~~g~~-~~~~~l~v~~-~p~~~~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~v~W~~~~~~~~~~~--------~ 434 (591)
.+.|..|.. .....+.|.. +|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+.... +
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~~~~~~~~~---~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 163 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVLRDDFRVEP---KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSR 163 (217)
T ss_dssp EEEETTEEEECCCEEEEECEECCSCSBCC---CCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCS
T ss_pred EEecCCCccccccceEEEEEeCCCcEECC---CccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCc
Confidence 999998876 3456777765 34433333 34567889999999999 899999999999999887332 2
Q ss_pred eEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCC
Q psy12425 435 FHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR 481 (591)
Q Consensus 435 ~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~ 481 (591)
+.+. ....|.|.++..+|.|.|+|.|.|..|....+..+.+...
T Consensus 164 ~~~~---~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 164 VRIV---DGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp EEEE---TTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred EEec---CCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 2222 2357999999999999999999999999866655555443
No 138
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.87 E-value=5.7e-21 Score=162.47 Aligned_cols=176 Identities=11% Similarity=0.065 Sum_probs=131.9
Q ss_pred cccceeccccEEEEEEEcCCCC-----CeeEEec-CCccCCCCCceEEEEeC---CeEEEEEcceecccceEEEEEEEeC
Q psy12425 300 RNANAIQNHNAQFQCTITGCPK-----PTISWLK-GSREITPSARHHIFAEG---DTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p~-----~~v~W~~-~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
..+.+.+|+.+.|.|.+.+.|. +.+.|++ ++.......+..+..+. +..+|.|.+++.+|+|.|+|.|.|.
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 89 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICG 89 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeC
Confidence 4566889999999999999886 8999999 44444434455544321 4568999999999999999999999
Q ss_pred CcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEec
Q psy12425 371 GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRD 450 (591)
Q Consensus 371 ~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 450 (591)
.|.....+.|.|..++..+ .. ....+..|+.+.|.|.+.|.|.|.+.|++++..+.. .......+....+.+..
T Consensus 90 ~~~~~~~~~l~V~~~~~~p---~~-~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~~ 163 (202)
T 3bp6_B 90 AAWDYKYLTVKVKASYMRI---DT-RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVLR 163 (202)
T ss_dssp TEEEEEEEEEEEEBCCCCE---EE-EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEEEE
T ss_pred CCcceEEEEEEecCCCCcc---cE-EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEEEE
Confidence 9988888888888754221 11 112456899999999999999999999998875532 12222233346677889
Q ss_pred cCCCcceeEEEEEEcCCCccceEEEEEecCC
Q psy12425 451 ASNVDTAPYRVVAENDLGMDSAIVKIQISDR 481 (591)
Q Consensus 451 ~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~ 481 (591)
+...|.|.|+|.|.|..|.....+.+.+..+
T Consensus 164 v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 164 LKPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp ECCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred EEcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 9999999999999999999988888888654
No 139
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.87 E-value=8.6e-22 Score=182.52 Aligned_cols=184 Identities=17% Similarity=0.294 Sum_probs=150.1
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccce-EEEEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDAD-EYVCRAV 368 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~c~a~ 368 (591)
..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....... ......+|.|.++...|+| .|+|.|.
T Consensus 156 c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~--~~~~~~~L~i~~v~~~D~G~~Y~C~a~ 233 (347)
T 2ifg_A 156 CGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKS--GGLPSLGLTLANVTSDLNRKNVTCWAE 233 (347)
T ss_dssp CCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCC--CCSSEEEEEEESCCSTTTTCCEEECCE
T ss_pred CCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccc--eecccceEEEeeCChHHCCCeEEEEEE
Confidence 357888888888899999999999999999999999999886543221110 2234558999999999999 9999999
Q ss_pred eCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEec-------C
Q psy12425 369 NKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETS-------E 441 (591)
Q Consensus 369 n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-------~ 441 (591)
|..|.....+.+.|..+|.+ ....+..|+.+.|.|.+.|.|.|.+.|+++|..+........... .
T Consensus 234 n~~g~~~~~~~l~V~~~P~i-------~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~ 306 (347)
T 2ifg_A 234 NDVGRAEVSVQVNVSFPASV-------QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETV 306 (347)
T ss_dssp ETTEECCEEECCCCBEEEEE-------EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCC
T ss_pred cCCCCEEEEEEEEEcCCCee-------eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcc
Confidence 99999888888888887775 111235689999999999999999999999998875544433222 2
Q ss_pred CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCC
Q psy12425 442 RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 442 ~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
....|.|.++...|+|.|+|.|.|..|..+..+.+.|..+|
T Consensus 307 ~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 307 RHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred cceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 36789999999999999999999999999999999998765
No 140
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.87 E-value=4.7e-20 Score=155.05 Aligned_cols=80 Identities=26% Similarity=0.371 Sum_probs=67.6
Q ss_pred eeccccEEEEEEEcCCCCCeeEEec--CCccCC---CCCceEEEEeCCeEEEEEccee-cccceEEEEEEEeCCcceeee
Q psy12425 304 AIQNHNAQFQCTITGCPKPTISWLK--GSREIT---PSARHHIFAEGDTYTLIINSVY-GVDADEYVCRAVNKGGVKSTK 377 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~p~~~v~W~~--~~~~~~---~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~c~a~n~~g~~~~~ 377 (591)
+.+|+.+.|.|.+.|.|.+.+.|++ ++..+. ...++.+..++...+|.|.++. .+|.|.|+|.|.|..|.....
T Consensus 104 ~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~ 183 (190)
T 2wv3_A 104 KNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVS 183 (190)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEE
T ss_pred eeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeE
Confidence 5677889999999999999999999 665543 4567777777777799999999 799999999999999998888
Q ss_pred eEEEEe
Q psy12425 378 AELIIM 383 (591)
Q Consensus 378 ~~l~v~ 383 (591)
+.|.|.
T Consensus 184 ~~l~V~ 189 (190)
T 2wv3_A 184 TVLRVR 189 (190)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888775
No 141
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.87 E-value=8.5e-21 Score=163.25 Aligned_cols=171 Identities=24% Similarity=0.368 Sum_probs=138.5
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
...+.+...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++...|+|.|+|.+.|
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~~~n 86 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN---------TSELIFNAVHVKDAGFYVCRVNN 86 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC---------SSEEEETTCCGGGCEEEEEEEEC
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC---------CCEEEEccCChhhCeEeEEEEEc
Confidence 356777888888889999999999999999999999999988776432 23799999999999999999999
Q ss_pred CCcce-eeeeEEEEecCCc---------------ccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeecc
Q psy12425 370 KGGVK-STKAELIIMTAPK---------------FNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGG 433 (591)
Q Consensus 370 ~~g~~-~~~~~l~v~~~p~---------------~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~ 433 (591)
..|.. +....|.|...+. +...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+...
T Consensus 87 ~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~- 162 (218)
T 3k0w_A 87 NFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEP---TSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE- 162 (218)
T ss_dssp TTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECC---CCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC-
T ss_pred CCCCceeeEEEEEEEccCcccccccccccCCCceEEECC---CceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC-
Confidence 98755 5567888876532 22111 2356788999999999999999999999999877532
Q ss_pred ceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCc-cceEEEEEecCC
Q psy12425 434 HFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM-DSAIVKIQISDR 481 (591)
Q Consensus 434 ~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~-~~~~~~~~v~~~ 481 (591)
....|.|.++...|.|.|+|.|.|..|. .+..+.|.|...
T Consensus 163 --------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 163 --------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp --------CSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-
T ss_pred --------CCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCC
Confidence 3468999999999999999999999887 477778888764
No 142
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.87 E-value=1e-20 Score=178.76 Aligned_cols=264 Identities=16% Similarity=0.090 Sum_probs=186.8
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|++..+.+|++++|.|.+. .+.+.|++||..+... + ..+....|+|.++...|+|.|.|.+.+ +.....+
T Consensus 210 P~~~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i~~~---r--i~~~~~~L~I~nl~~sd~g~y~~~C~~--~~~i~~~ 279 (488)
T 2q7n_A 210 PQDKVVLAGSNMTICCMSP---TKVLSGQIGNTLRPLI---H--LYGQTVAIHILNIPVSENSGTNIIFIT--DDDVYGT 279 (488)
T ss_dssp CTTCEEESSCCCEEEECCS---SCEEEEEETTEECCCE---E--CSSSCEEEECCSCCCCCSSCEEEEEEE--SSCEEEE
T ss_pred CCCCEEcCCCCEEEEEECC---CCEEEEEECCEECchh---h--ccceEEEEEEeCCCcccCCcEEEEEEc--CCeEEEE
Confidence 7888999999999999998 3599999999887544 2 244557899999999999888887763 2234468
Q ss_pred EEEEecCCCCCCCCcceEEecCceEEEEecCCCCC--CCcceeeEEEEEEecCCC-ceEEEEee-cCcceEEEcCCcCCc
Q psy12425 82 TINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYD--GGLKVTHYVVERRDISMP-HWICISTT-CHDTTFIVQGLTEGQ 157 (591)
Q Consensus 82 ~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~--~~~~~~~y~~~~~~~~~~-~~~~~~~~-~~~~~~~i~~l~~~~ 157 (591)
.+.+..+|.+|.. +.........++++|.++... +|..+..|.+.+...+.. .|...... .....+.+..+....
T Consensus 280 ~l~v~~pP~~P~n-l~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~~~~~~~~~ct~~l~~~~t 358 (488)
T 2q7n_A 280 VVFAGYPPDVPQK-LSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQE 358 (488)
T ss_dssp EEEEECCCCCCCS-CEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSSCCCSSCEEEEEECCSSCC
T ss_pred EEEeeCCCCCCcc-cEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCccccccCCceEEEEEcCCCCcc
Confidence 8888889988887 556666778999999987755 345678899988643221 12111100 233456665544468
Q ss_pred EEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccE
Q psy12425 158 EYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQ 237 (591)
Q Consensus 158 ~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~ 237 (591)
.|.|+|.|.|..|.+.. . ..+. .....+|.+|..+.+.......+.|+|.+|...+ ..+..|.+.++..+...|.
T Consensus 359 ~Y~f~V~A~N~~G~~~S-~--~~~~-~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~-g~~l~YeV~Yr~~~~~~w~ 433 (488)
T 2q7n_A 359 IHNFTLTGRNPLGQAQS-A--VVIN-VTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFT-KINLLCQIEICKANSKKEV 433 (488)
T ss_dssp CCEEEEEEEETTEEEEE-E--EECC-GGGTBCCCCCEEEEEEECSTTCEEEEEEEEEECS-SSEEEEEEEEBCTTSCCEE
T ss_pred EEEEEEEEEeCCCCccc-e--EEEE-ecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCC-CcceEEEEEEEECCCCCce
Confidence 99999999999887432 1 1111 1123467788878877778889999999985443 4678999999988776664
Q ss_pred E-EEeeecCCcee--eecCcccCCcEEEEEEEEcCCCCCCCCCCcceE
Q psy12425 238 R-VNVAICAPSQI--NIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSV 282 (591)
Q Consensus 238 ~-~~~~~~~~~~~--~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~ 282 (591)
. ..........+ .+.+|.++..|.++++|.+ .|.+.++..+..+
T Consensus 434 ~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v 480 (488)
T 2q7n_A 434 RNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEK 480 (488)
T ss_dssp EEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCC
T ss_pred EEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCE
Confidence 3 22211112345 8999999999999999999 7876555544333
No 143
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.87 E-value=2.2e-21 Score=166.81 Aligned_cols=189 Identities=23% Similarity=0.400 Sum_probs=141.7
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCc-----eEEEEeCCeE--EEEEcceecccceE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSAR-----HHIFAEGDTY--TLIINSVYGVDADE 362 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~-----~~~~~~~~~~--~l~i~~~~~~d~g~ 362 (591)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... .....++... .|.|.++...|+|.
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 3578888888888899999999999999999999999999887754321 1222223222 24456779999999
Q ss_pred EEEEEEeCCcce-eeeeEEEEecCCc-ccCCCCcccceeecCCCeEEEEEee-eccCCCeEEEeeCCeEeeeccceEEEe
Q psy12425 363 YVCRAVNKGGVK-STKAELIIMTAPK-FNVPPRFRDTAYFDKGENVVVKIPF-TGYPKPKITWYRDNEVIESGGHFHVET 439 (591)
Q Consensus 363 y~c~a~n~~g~~-~~~~~l~v~~~p~-~~~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~ 439 (591)
|+|.|.|..|.. .....+.|...|. +...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+..........
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~---~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~ 163 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAILRDDFRQNP---SDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR 163 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEECSSCSBCC---CCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE
T ss_pred EEEEEECCCCceeecceEEEEEeccccceeCC---CceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc
Confidence 999999998876 4567777766433 22222 34567889999999999 899999999999999887544332221
Q ss_pred cCCeeEEEEeccCCCcceeEEEEEEcCCCccc-eEEEEEecCCCCC
Q psy12425 440 SERHAILTIRDASNVDTAPYRVVAENDLGMDS-AIVKIQISDRPDP 484 (591)
Q Consensus 440 ~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~-~~~~~~v~~~p~~ 484 (591)
...|.|.++...|.|.|+|.|.|..|... ..+.|.|..+|..
T Consensus 164 ---~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~ 206 (212)
T 2v9r_A 164 ---GGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSF 206 (212)
T ss_dssp ---TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred ---CCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchH
Confidence 35899999999999999999999999864 4588888887743
No 144
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.87 E-value=7.2e-21 Score=169.42 Aligned_cols=237 Identities=13% Similarity=0.173 Sum_probs=159.8
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcC-CCCC--eeEEecCCccCCCCCceEEEEeCCeEEEEEcce---ecccceE-
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITG-CPKP--TISWLKGSREITPSARHHIFAEGDTYTLIINSV---YGVDADE- 362 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~g~- 362 (591)
+.+|.+..+ ..+.+|+.+.|.|.+.+ .|.+ .+.|++++..+.. .+...+. .+.+..+ ...|.|.
T Consensus 4 ~~~p~~~~~---~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~--~~~~~~~~~~~~~d~g~g 74 (265)
T 2oz4_A 4 ATPPQLVSP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGND--SFSAKASVSVTAEDEGTQ 74 (265)
T ss_dssp SSCCEEECC---SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSS--EEEEEEEEEECGGGCEEE
T ss_pred CCCCccccC---ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCC--eEEEEeecccccccCCcc
Confidence 345555543 35789999999999998 7776 9999999988764 3333444 3444444 6778775
Q ss_pred -EEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecC
Q psy12425 363 -YVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSE 441 (591)
Q Consensus 363 -y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 441 (591)
|+|.|.|..|.......|.|...|..... .....+.+|+.+.|.|.+. |.+.+.| +|..+.. .+
T Consensus 75 ~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~---~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~--------~~ 139 (265)
T 2oz4_A 75 RLTCAVILGNQSQETLQTVTIYSFPAPNVI---LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP--------LG 139 (265)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCCCEEE---ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSC--------CS
T ss_pred eEEEEEecCCCCcEEEEEEEEeCCCCceee---cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccC--------CC
Confidence 99999999999888899999874432111 1234567899999999998 9999999 7766521 23
Q ss_pred CeeEEEEeccCCCcceeEEEEEEcCC-Cccc---eEEEEEecCCCCCCCCC---eeeeecCCeeEEEeeccccCCCccee
Q psy12425 442 RHAILTIRDASNVDTAPYRVVAENDL-GMDS---AIVKIQISDRPDPPQFP---TVEDIGHDSLALVWRAPIWDGGSNIT 514 (591)
Q Consensus 442 ~~~~l~i~~~~~~~~g~y~c~a~n~~-g~~~---~~~~~~v~~~p~~p~~~---~~~~~~~~~v~l~W~~p~~~~~~~~~ 514 (591)
....|.|..+..+|.|.|+|.|.|.. |... ..+.|.|..+|...... ......+..+.|.|.... .+..
T Consensus 140 ~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g----~P~p 215 (265)
T 2oz4_A 140 PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWG----NPLP 215 (265)
T ss_dssp SEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEE----ESCC
T ss_pred CcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECcc----CCCC
Confidence 45678899999999999999998654 7664 67778887766442211 222334677888887421 1211
Q ss_pred eEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCC
Q psy12425 515 NYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSD 564 (591)
Q Consensus 515 ~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~ 564 (591)
. +.|...+. ...... .+..+...+.+.|+|.|.|.+|...
T Consensus 216 ~--i~W~~~~~---~~~~~g-----~~~~v~~~d~G~Y~C~a~N~~G~~~ 255 (265)
T 2oz4_A 216 E--LKCLKDGT---FPLPIG-----ESVTVTRDLEGTYLCRARSTQGEVT 255 (265)
T ss_dssp E--EEEEETTT---EECCTT-----SCEECCGGGCEEEEEEEEETTEEEE
T ss_pred e--EEEEECCc---ccCCCC-----cEEEeehhhCeEEEEEEECCCCcEE
Confidence 2 22222221 111111 1123778999999999999998643
No 145
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.86 E-value=1.2e-20 Score=159.38 Aligned_cols=170 Identities=13% Similarity=0.111 Sum_probs=126.5
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+.. .+.+|+.+.|.|.+.+ +.+.+.|++++..+..... ..........|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQ-NPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEE-CCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccc-ccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 46777777666 7889999999999998 6789999999887653211 1111234568999999999999999999999
Q ss_pred Ccc--eeeeeEEEEecC---CcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccce-EEEecCCee
Q psy12425 371 GGV--KSTKAELIIMTA---PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHF-HVETSERHA 444 (591)
Q Consensus 371 ~g~--~~~~~~l~v~~~---p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~ 444 (591)
.|. .+....|.|... |.+...+. ..+..|+.++|.|.+.+. .+.+.|+++|..+...... .........
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~~~~~~~----~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~ 155 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTGAYSKPTLSALPS----PLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQA 155 (196)
T ss_dssp TEEBCCCCCEEEEEECSSCCCEEEEESC----SEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEE
T ss_pred CcccCCCccEEEEecCCCCCCEEEeCCc----ceecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcce
Confidence 883 355567777643 33332221 256789999999999884 5689999999866433221 222233567
Q ss_pred EEEEeccCCCcceeEEEEEEcCCC
Q psy12425 445 ILTIRDASNVDTAPYRVVAENDLG 468 (591)
Q Consensus 445 ~l~i~~~~~~~~g~y~c~a~n~~g 468 (591)
.|.|.++..+|+|.|+|.|.|..+
T Consensus 156 ~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 156 EFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEECSCCGGGCEEEEEEEECGGG
T ss_pred EEEeCCCcccCCCeEEEEEEcCCC
Confidence 899999999999999999999986
No 146
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.86 E-value=5e-20 Score=156.24 Aligned_cols=182 Identities=15% Similarity=0.233 Sum_probs=145.3
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+.+.|.+.+.|+|++..+....++.+...+...+|.|.+++.+|+|.|+|.+.|..|.....+
T Consensus 14 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 93 (197)
T 3lcy_A 14 MKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSS 93 (197)
T ss_dssp CCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEE
T ss_pred CCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEE
Confidence 56789999999999999999999999999999999888888888888888999999999999999999988776554444
Q ss_pred EEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEE
Q psy12425 82 TINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 161 (591)
Q Consensus 82 ~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~ 161 (591)
.|.|...|..
T Consensus 94 ~l~v~~~p~~---------------------------------------------------------------------- 103 (197)
T 3lcy_A 94 KLLLQATPQF---------------------------------------------------------------------- 103 (197)
T ss_dssp EEEEEEEEEE----------------------------------------------------------------------
T ss_pred EEEEEcCCCC----------------------------------------------------------------------
Confidence 4333211000
Q ss_pred EEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEe
Q psy12425 162 HVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV 241 (591)
Q Consensus 162 ~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 241 (591)
. .
T Consensus 104 ---------------------------~---------------------------~------------------------ 105 (197)
T 3lcy_A 104 ---------------------------H---------------------------P------------------------ 105 (197)
T ss_dssp ---------------------------C---------------------------T------------------------
T ss_pred ---------------------------C---------------------------C------------------------
Confidence 0 0
Q ss_pred eecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCC
Q psy12425 242 AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK 321 (591)
Q Consensus 242 ~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~ 321 (591)
.. ..+ ....+..|+.+.|.|.+.+.|.
T Consensus 106 -----------------------------~~-----------------~~~-------~~~~~~~g~~~~l~C~~~~~p~ 132 (197)
T 3lcy_A 106 -----------------------------GY-----------------PLK-------EKYYGAVGSTLRLHVMYIGRPV 132 (197)
T ss_dssp -----------------------------TS-----------------CCC-------SEEEEETTSCEEEEEEEEEESC
T ss_pred -----------------------------Cc-----------------cCC-------cceeecCCCeEEEEEEEeeeeC
Confidence 00 000 0112345777899999999999
Q ss_pred CeeEEecCCccCCCCCceEEEEeCCeEEEEEcceec-ccceEEEEEEEeCCcceeeeeEEEEec
Q psy12425 322 PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYG-VDADEYVCRAVNKGGVKSTKAELIIMT 384 (591)
Q Consensus 322 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~c~a~n~~g~~~~~~~l~v~~ 384 (591)
+.+.|++++..+....++.+...+....|.|.++.. +|.|.|+|.|.|..|.....+.|.|..
T Consensus 133 p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 133 PAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp CEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred CeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 999999999999888888887777778999999995 899999999999999998888888764
No 147
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.86 E-value=8e-21 Score=168.03 Aligned_cols=203 Identities=16% Similarity=0.206 Sum_probs=125.5
Q ss_pred cccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCC-----CCeeEEec
Q psy12425 254 LIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP-----KPTISWLK 328 (591)
Q Consensus 254 l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p-----~~~v~W~~ 328 (591)
++++|.|.|+|.|. |.... ...+.+. .++.+...+..+.+.+|+.+.|.|.+.+.| .+.+.|++
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~---~~~~~~~-----~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 79 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFT---NYWMNWL-----RELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLL 79 (254)
T ss_dssp --------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEE
T ss_pred ecCCccEEEEEcCc---hhhhh---hhhhhee-----eceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEE
Confidence 67889999999997 32221 1112111 256677767788899999999999999988 48999997
Q ss_pred CC--ccC------------CCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eeeeEEEEec---CCcccC
Q psy12425 329 GS--REI------------TPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKAELIIMT---APKFNV 390 (591)
Q Consensus 329 ~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~~l~v~~---~p~~~~ 390 (591)
+. ..+ ....++.+...+...+|.|.+++.+|+|.|+|.|.|..+.. .....+.|.. +|.+..
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~ 159 (254)
T 2c1o_A 80 QRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSI 159 (254)
T ss_dssp ECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEE
T ss_pred eCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEe
Confidence 43 211 11356666667778899999999999999999999986643 2234566653 343332
Q ss_pred CCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeCCeEeeeccc--eEEEecC-----CeeEEEEeccCCCcceeEEE
Q psy12425 391 PPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRDNEVIESGGH--FHVETSE-----RHAILTIRDASNVDTAPYRV 461 (591)
Q Consensus 391 ~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~~~~~~--~~~~~~~-----~~~~l~i~~~~~~~~g~y~c 461 (591)
.+. ......|+.+.|.|.+.|. |. +.+.|+++|..+..... ....... ....|.|.++..+|.|.|+|
T Consensus 160 ~~~---~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C 236 (254)
T 2c1o_A 160 FPP---SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTC 236 (254)
T ss_dssp ECC---CHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEE
T ss_pred ecC---ChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEE
Confidence 111 1112357799999999884 44 46999999988765411 1111111 14689999999999999999
Q ss_pred EEEcCCCcc
Q psy12425 462 VAENDLGMD 470 (591)
Q Consensus 462 ~a~n~~g~~ 470 (591)
.|.|.....
T Consensus 237 ~a~n~~~~~ 245 (254)
T 2c1o_A 237 EATHKTSTS 245 (254)
T ss_dssp EEECTTCSS
T ss_pred EEEcCCCCC
Confidence 999987654
No 148
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.86 E-value=7.3e-21 Score=160.60 Aligned_cols=170 Identities=12% Similarity=0.100 Sum_probs=117.3
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+. ..+.+|+.+.|.|.+.+.|. .+.|++++..+..... ..........|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 4 SKATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CBCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 4677776665 46889999999999998876 9999999887643211 0011234568999999999999999999998
Q ss_pred Ccce--eeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccce-EEE-ecCCe
Q psy12425 371 GGVK--STKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHF-HVE-TSERH 443 (591)
Q Consensus 371 ~g~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~-~~~-~~~~~ 443 (591)
.|.. +..+.|.|.. +|.+...+. ..+..|+.+.|.|.+.+.| +.+.|+++|..+...... ... .....
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~i~~~~~----~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~ 155 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFYNKPTLSALPS----PVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQ 155 (196)
T ss_dssp TEECBCCCCEEEEEECSSCCCEEEC---------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEE
T ss_pred CCcCCcCccEEEEecCCCCCCeEEccCC----ccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCce
Confidence 7754 3457777776 344433321 3567899999999999998 999999999876432211 111 11235
Q ss_pred eEEEEeccCCCcceeEEEEEEcCCC
Q psy12425 444 AILTIRDASNVDTAPYRVVAENDLG 468 (591)
Q Consensus 444 ~~l~i~~~~~~~~g~y~c~a~n~~g 468 (591)
..|.|.+++.+|+|.|+|.|.|..+
T Consensus 156 ~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 156 ALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEEECCCCBTTBCEEEEEEEEETTE
T ss_pred eEEEeeecCcccCeeEEEEEEccCC
Confidence 8899999999999999999999865
No 149
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.86 E-value=4.3e-20 Score=155.90 Aligned_cols=174 Identities=18% Similarity=0.222 Sum_probs=126.8
Q ss_pred eeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEe
Q psy12425 304 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 383 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 383 (591)
+.+|+.+.|.|.+.|.|.+.+.|++...... . ......+....|.|.++..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 13 ~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~-~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~ 89 (202)
T 1vca_A 13 AQIGDSVSLTCSTTGCESPFFSWRTQIDSPL-N--GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIY 89 (202)
T ss_dssp EETTSCEEEEEEEESCSSCEEEEEETTCCCC-S--SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCCCcEEEEEeecCCCCCeEEEECCCCCCc-c--ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEE
Confidence 4589999999999999999999988422111 1 122344556689999999999999999999999888888899998
Q ss_pred cCCcccCCCCcccceeecCCCeEEEEEeeeccCC---CeEEEeeCCeEeeeccceEEE----ecCCeeEEEEeccCCCcc
Q psy12425 384 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK---PKITWYRDNEVIESGGHFHVE----TSERHAILTIRDASNVDT 456 (591)
Q Consensus 384 ~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~---~~v~W~~~~~~~~~~~~~~~~----~~~~~~~l~i~~~~~~~~ 456 (591)
.+|...... ....+..|+.+.|.|.+.+.++ +.|.|++++..+......... .......|.|.....+|.
T Consensus 90 ~~p~~~~~~---~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~ 166 (202)
T 1vca_A 90 SFPKDPEIH---LSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIG 166 (202)
T ss_dssp BCCSCCEEE---ESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTT
T ss_pred eCCCCCEeC---CceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCC
Confidence 877543211 1145688999999999988643 379999999887543210000 011234567888888899
Q ss_pred eeEEEEEEcCCCcc-------ceEEEEEecCCCC
Q psy12425 457 APYRVVAENDLGMD-------SAIVKIQISDRPD 483 (591)
Q Consensus 457 g~y~c~a~n~~g~~-------~~~~~~~v~~~p~ 483 (591)
|.|+|.|.|..|.. +.+..|.|..+|.
T Consensus 167 g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 167 KVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred CeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 99999999998863 3566777776663
No 150
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.85 E-value=1.7e-20 Score=155.10 Aligned_cols=167 Identities=14% Similarity=0.182 Sum_probs=131.0
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCe-eEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT-ISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
..+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+.. ....|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~----------~~~~L~i~~~~~~d~G~Y~C~~~ 74 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS----------QASSYFIDAATVNDSGEYRCQTN 74 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES----------SCSEEEESSCCGGGCEEEEEECS
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC----------CceEEEEeCCCcccCEEEEEEee
Confidence 3568888887777899999999999999988776 889999876542 22379999999999999999999
Q ss_pred eCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCC-eEEEeeCCeEeeeccceEEEecCCeeEEE
Q psy12425 369 NKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP-KITWYRDNEVIESGGHFHVETSERHAILT 447 (591)
Q Consensus 369 n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~ 447 (591)
|..+ +....+.|..++.....+ ...+..|+.+.|.|.+.+.+++ .+.|+++|..+.. ......|.
T Consensus 75 n~~~--s~~~~l~V~~~~~~~~~~----~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~--------~~~~~~L~ 140 (175)
T 1fnl_A 75 LSTL--SDPVQLEVHIGWLLLQAP----RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY--------FHHNSDFH 140 (175)
T ss_dssp SSCC--CCCEEEEEECSSEEEECS----CSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE--------EEECCCEE
T ss_pred CCcc--cccEEEEEeCCCceeeCC----CceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC--------CCCCCEEE
Confidence 8544 556677777554433322 2346789999999999987665 9999999987732 12357899
Q ss_pred EeccCCCcceeEEEEEEcCCCc-cceEEEEEecC
Q psy12425 448 IRDASNVDTAPYRVVAENDLGM-DSAIVKIQISD 480 (591)
Q Consensus 448 i~~~~~~~~g~y~c~a~n~~g~-~~~~~~~~v~~ 480 (591)
|.++..+|+|.|+|.|.|..|. .+..+.|.|.+
T Consensus 141 i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 141 IPKATLKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EcccChhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 9999999999999999997664 46677777754
No 151
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.85 E-value=7.3e-20 Score=153.85 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=67.2
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEE-CCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeee
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTK-NGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 77 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~ 77 (591)
|.++.+.+|+++.|.|.+.+.|. .+.|+| ++..+....++.+...+....|.|.+++.+|+|.|+|.+.|..|..
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 84 (189)
T 2v44_A 9 LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQT 84 (189)
T ss_dssp CSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCE
T ss_pred CCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCc
Confidence 67899999999999999998877 999999 8888888888888887778899999999999999999999876543
No 152
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.85 E-value=1.2e-19 Score=153.37 Aligned_cols=75 Identities=16% Similarity=0.276 Sum_probs=63.3
Q ss_pred CceeeeecCCeEEEEEEec-cCCCceEEEEECCEEeecCC--ceeEEEeCC-------eEEEEEcccCCCCceEEEEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYA-GDQPMEVSLTKNGRVVQSDD--RFKFTVLDD-------YIIIFIKEIRKEDAGDYTVNLS 71 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~-~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~-------~~~l~i~~~~~~d~g~Y~c~~~ 71 (591)
|.++.+.+|+++.|.|.+. |.|.+.+.|+|+|..+.... ++++....+ ...|.|.+++.+|+|.|+|.+.
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 88 (195)
T 2c5d_C 9 PGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVF 88 (195)
T ss_dssp CCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEE
T ss_pred hhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEE
Confidence 7789999999999999999 89999999999999987763 444544443 5689999999999999999998
Q ss_pred cCCee
Q psy12425 72 NSSGS 76 (591)
Q Consensus 72 n~~g~ 76 (591)
|..|.
T Consensus 89 ~~~~~ 93 (195)
T 2c5d_C 89 LGHQT 93 (195)
T ss_dssp ETTEE
T ss_pred eCCCc
Confidence 76443
No 153
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.85 E-value=3.8e-21 Score=165.65 Aligned_cols=176 Identities=15% Similarity=0.286 Sum_probs=133.7
Q ss_pred cccceeccccEEEEEEEcCCC----CCeeEEecCC----------------ccCCC-----CCceEEEE---eCCeEEEE
Q psy12425 300 RNANAIQNHNAQFQCTITGCP----KPTISWLKGS----------------REITP-----SARHHIFA---EGDTYTLI 351 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p----~~~v~W~~~~----------------~~~~~-----~~~~~~~~---~~~~~~l~ 351 (591)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++.+ ..+.. ..+..+.. .....+|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 456688999999999999877 4699998843 22221 22333321 11345799
Q ss_pred EcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEee-eccCCCeEEEeeCCe--E
Q psy12425 352 INSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF-TGYPKPKITWYRDNE--V 428 (591)
Q Consensus 352 i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~v~W~~~~~--~ 428 (591)
|.+++.+|+|.|+|.|.|..|.......|.|..+|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++. .
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~---~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~ 164 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCF---VDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQT 164 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEE---EESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCC
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceee---eecceecCCcEEEEecCCCCCCCCEEEEEECCCCCc
Confidence 99999999999999999999988888999999887754322 22336789999999999 899999999999543 3
Q ss_pred eeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCC
Q psy12425 429 IESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 429 ~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
+..... .......|.|.++..+|.|.|+|.|.|..|..+..+.|.|..||
T Consensus 165 ~~~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 165 MPTPWL----AEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp CCGGGG----GGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCCC
T ss_pred cCccce----eccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCCC
Confidence 322111 12235599999999999999999999999999999999887543
No 154
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.85 E-value=8.6e-21 Score=162.45 Aligned_cols=178 Identities=13% Similarity=0.094 Sum_probs=124.0
Q ss_pred ccccceecc--ccEEEEEEEcCCCCCeeEEecC---CccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcc
Q psy12425 299 LRNANAIQN--HNAQFQCTITGCPKPTISWLKG---SREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGV 373 (591)
Q Consensus 299 ~~~~~~~~g--~~~~l~c~~~~~p~~~v~W~~~---~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~ 373 (591)
+..+.+.+| +.+.|.|.+.+ |.+.+.|++. +..+....++.....+ .|.|.++..+|+|.|+|.|.|..+.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~---~l~I~~v~~~D~G~Y~C~a~n~~~~ 89 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK---GFTIPSYMISYAGMVFCEAKINDES 89 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT---EEEEEGGGTTTCSEEEEEEC----C
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc---cEEEccCChhcCceEEEEEEECCee
Confidence 356778899 99999999987 7789999874 5555544444332222 6999999999999999999985444
Q ss_pred eee-eeEEEEec--CCcccCCCCcccceeecCCCeEEEEEeeeccCC--CeEEEeeCCeEeeeccc-eEEEe-------c
Q psy12425 374 KST-KAELIIMT--APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK--PKITWYRDNEVIESGGH-FHVET-------S 440 (591)
Q Consensus 374 ~~~-~~~l~v~~--~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~--~~v~W~~~~~~~~~~~~-~~~~~-------~ 440 (591)
... ...|.|.. +|.+...+. ....+..|+.+.|.|.+.|.|. +.+.|++++..+..... ..... .
T Consensus 90 ~~s~~~~l~v~~~~~p~~~~~~~--~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~ 167 (213)
T 2x1w_L 90 YQSIMYIVVVVGYRIYDVVLSPS--HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMK 167 (213)
T ss_dssp EECCCEEEEECBCCEEEEEEESC--SCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCE
T ss_pred EEEEEEEEEEeCCcccceEEcCC--CCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccce
Confidence 322 25666643 222222221 2346789999999999998654 57999999876432111 00000 1
Q ss_pred CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCC
Q psy12425 441 ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 441 ~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
.....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 168 ~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 168 KFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp EEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred eeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 224679999999999999999999999999999999998766
No 155
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=5.5e-20 Score=153.81 Aligned_cols=166 Identities=17% Similarity=0.332 Sum_probs=131.8
Q ss_pred cceeccccEEEEEEEcCCCCC--eeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeE
Q psy12425 302 ANAIQNHNAQFQCTITGCPKP--TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAE 379 (591)
Q Consensus 302 ~~~~~g~~~~l~c~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~ 379 (591)
..+.+|+.+.|.|.+.+.|.+ .+.|++++..+....... ....|.|. ..+|+|.|+|.|.| .......
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~-----~~~~l~i~--~~~d~G~Y~C~~~n---~~~~~~~ 77 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG-----QKTEFKVD--SDDQWGEYSCVFLP---EPMGTAN 77 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC-----SEEEEEEC--GGGCCEEEEEEEES---TTSCEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC-----CcEEEEEe--chhhCeEEEEEEEC---CcCcEEE
Confidence 346889999999999988777 899999988775543221 23356666 68999999999998 3346778
Q ss_pred EEEecCCcccCCCCcccceeecCCCeEEEEEeeeccC-CCeEEEee---CCeEee-e--ccceEEEecCCeeEEEEeccC
Q psy12425 380 LIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYP-KPKITWYR---DNEVIE-S--GGHFHVETSERHAILTIRDAS 452 (591)
Q Consensus 380 l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p-~~~v~W~~---~~~~~~-~--~~~~~~~~~~~~~~l~i~~~~ 452 (591)
|.|..+|.+...+ ....+..|+.+.|.|.+.|.| .+.+.|++ ++.... . ..++.+...+....|.|.++.
T Consensus 78 l~V~~~P~~~~~~---~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 154 (184)
T 3b5h_A 78 IQLHGPPRVKAVK---SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLN 154 (184)
T ss_dssp EEECCSCCCEESC---SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCC
T ss_pred EEEecCCceeecC---CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecc
Confidence 8898888876554 334578899999999999999 89999999 454433 2 256777766778899999999
Q ss_pred -CCcceeEEEEEEcCCCccceEEEEEecC
Q psy12425 453 -NVDTAPYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 453 -~~~~g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
..|.|.|+|.|.|..|.....+.|.|..
T Consensus 155 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 155 MEADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp TTTSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ccccCceEEEEEEeCCCcceEEEEEEEec
Confidence 9999999999999999998888888753
No 156
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.85 E-value=3.7e-21 Score=165.00 Aligned_cols=180 Identities=19% Similarity=0.334 Sum_probs=137.5
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccC------------CCCCceEEEEeCCeEEEEEcceeccc
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREI------------TPSARHHIFAEGDTYTLIINSVYGVD 359 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d 359 (591)
++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++.+.. .+|.|.++..+|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~~d 79 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTRED 79 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCTTS
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCHHH
Confidence 455666667788999999999999999999999999976652 1123333322 379999999999
Q ss_pred ceEEEEEEEeCCcc--eeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEee-eccCCCeEEEeeCCeEeeeccce-
Q psy12425 360 ADEYVCRAVNKGGV--KSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF-TGYPKPKITWYRDNEVIESGGHF- 435 (591)
Q Consensus 360 ~g~y~c~a~n~~g~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~v~W~~~~~~~~~~~~~- 435 (591)
+|.|+|.+.|..|. ......|.|..+|.+...+. ...+..|+.+.|.|.+ .+.|.+.+.|++++..+......
T Consensus 80 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~---~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~ 156 (209)
T 1nbq_A 80 TGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNI---PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKST 156 (209)
T ss_dssp CSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCC---BSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSS
T ss_pred CcEEEEEEecCCCCccceEEEEEEEecCCcCCCccc---ccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccc
Confidence 99999999998663 35567778888877654332 3457889999999997 89999999999999877654321
Q ss_pred ------EEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc--ceEEEEEe
Q psy12425 436 ------HVETSERHAILTIRDASNVDTAPYRVVAENDLGMD--SAIVKIQI 478 (591)
Q Consensus 436 ------~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~--~~~~~~~v 478 (591)
..........|.|.++..+|.|.|+|.|.|..|.. +..+.|.|
T Consensus 157 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 157 RAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp SSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred eeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 11122346789999999999999999999999988 44444444
No 157
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.85 E-value=2.4e-20 Score=159.65 Aligned_cols=173 Identities=14% Similarity=0.255 Sum_probs=130.8
Q ss_pred cccceeccccEEEEEEEcCCCCCeeEEecCCccCCC-------------------CCceEEEEeCCeEEEEEcceecccc
Q psy12425 300 RNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-------------------SARHHIFAEGDTYTLIINSVYGVDA 360 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~-------------------~~~~~~~~~~~~~~l~i~~~~~~d~ 360 (591)
....+.+|+.+.|.|...+.+.+.+.|++++..... ..+..+..++ +|.|.+++.+|+
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~ 83 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG---SLLFQMITMKDM 83 (208)
T ss_dssp ESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTS---CEEECSCCGGGC
T ss_pred ccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCC---eEEEccccccCC
Confidence 346688999999999988888999999987542211 1122222222 699999999999
Q ss_pred eEEEEEEEeCC-cceeeeeEEEEecCCc---ccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceE
Q psy12425 361 DEYVCRAVNKG-GVKSTKAELIIMTAPK---FNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFH 436 (591)
Q Consensus 361 g~y~c~a~n~~-g~~~~~~~l~v~~~p~---~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~ 436 (591)
|.|+|.+.|.. +.......|.|..++. +...+ . . +..|+.+.|.|.+.+.| |.+.|++++..+....++.
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~---~-~-~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~ 157 (208)
T 3r4d_A 84 GVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTN---T-T-VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMT 157 (208)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESC---S-S-CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEE
T ss_pred eEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCC---c-e-EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeE
Confidence 99999999985 5556677788876533 22211 1 1 67899999999999976 8999999999987766665
Q ss_pred EEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc-ceEEEEEecCCCC
Q psy12425 437 VETSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQISDRPD 483 (591)
Q Consensus 437 ~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p~ 483 (591)
+.. ....|.|.++...|.|.|+|.|.|..|.. +..+.|.+..+|.
T Consensus 158 ~~~--~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 158 LSQ--NNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp EET--TTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC----
T ss_pred EcC--CCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 543 34789999999999999999999999987 6778888877654
No 158
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.85 E-value=1e-20 Score=156.69 Aligned_cols=169 Identities=14% Similarity=0.199 Sum_probs=130.5
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCC-eeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKP-TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
.+|.+...+....+.+|+.+.|.|.+.+.+.+ .+.|++++..+... ..+|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECTT
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcCC
Confidence 46777777777889999999999999998875 69999998876532 23799999999999999999988
Q ss_pred CCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeee-ccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEE
Q psy12425 370 KGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFT-GYPKPKITWYRDNEVIESGGHFHVETSERHAILTI 448 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i 448 (591)
..+ +....+.|..++.+...+ ...+..|+.+.|.|.+. +.|.+.+.|+++|..+.. ......|.|
T Consensus 73 ~~~--s~~~~l~V~~~~~~~~~~----~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~--------~~~~~~L~i 138 (176)
T 1f2q_A 73 VNE--SEPVYLEVFSDWLLLQAS----AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKY--------WYENHNISI 138 (176)
T ss_dssp SSC--CCCEEEEEECSSEEEEES----CSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCS--------CCCSSEEEE
T ss_pred ccc--cccEEEEEeCcceeecCC----cceeeCCCCEEEEEEecCCCCceEEEEEECCEEEee--------ecCCCeEEE
Confidence 554 445667776444433222 23567899999999995 667789999999987632 234678999
Q ss_pred eccCCCcceeEEEEEEcCCC-ccceEEEEEecCCCC
Q psy12425 449 RDASNVDTAPYRVVAENDLG-MDSAIVKIQISDRPD 483 (591)
Q Consensus 449 ~~~~~~~~g~y~c~a~n~~g-~~~~~~~~~v~~~p~ 483 (591)
.++..+|+|.|+|.|.|..| ..+..+.|.|..+|.
T Consensus 139 ~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 139 TNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred CCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 99999999999999999644 446778888887764
No 159
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.85 E-value=1.4e-21 Score=187.59 Aligned_cols=305 Identities=11% Similarity=0.163 Sum_probs=177.3
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCC-CCC-e
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC-PKP-T 323 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~ 323 (591)
...|.|.+++..|.|.|+|.|.|..+.. .....+.+... ...+|.+........+.+|+.+.|.|.+.|. |.+ .
T Consensus 77 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~---~~~~~l~V~~~-~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~ 152 (434)
T 1igy_B 77 TANIHLSSLTSDDSAVYYCVREGEVPYW---GQGTTVTVSSA-KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVT 152 (434)
T ss_dssp BBCEEECSBCGGGCSEECCCCSSSSCCC---CCCEECEECCS-CCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCE
T ss_pred EEEEEECCCChHHCEEEEEEEEcccccc---CCceEEEEccC-CCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeE
Confidence 3479999999999999999998853221 12234444321 1234554433333346789999999999886 776 9
Q ss_pred eEEecCCccCCCCCceEEEEeCC---eEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEec---------C---Ccc
Q psy12425 324 ISWLKGSREITPSARHHIFAEGD---TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMT---------A---PKF 388 (591)
Q Consensus 324 v~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~---------~---p~~ 388 (591)
+.|++++..+...........+. ...|.|.++..+| |.|+|.|.|..|.......+.+.. . |.+
T Consensus 153 v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v 231 (434)
T 1igy_B 153 VTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSV 231 (434)
T ss_dssp EEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCE
T ss_pred EEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEE
Confidence 99999886532100000111111 1368898998888 999999999988754443332221 0 222
Q ss_pred c-CCCCcccceeecCCCeEEEEEeeeccC----CCeEEEeeCCeEeeeccceEEE-ec----CCeeEEEEeccCCCccee
Q psy12425 389 N-VPPRFRDTAYFDKGENVVVKIPFTGYP----KPKITWYRDNEVIESGGHFHVE-TS----ERHAILTIRDASNVDTAP 458 (591)
Q Consensus 389 ~-~~~~~~~~~~~~~g~~~~l~c~~~~~p----~~~v~W~~~~~~~~~~~~~~~~-~~----~~~~~l~i~~~~~~~~g~ 458 (591)
. .++... ..+..|+.+.|.|.+.|.+ .+.|.|++++..+......... .. .....|.|.++..+|.|.
T Consensus 232 ~~~~p~~~--~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 309 (434)
T 1igy_B 232 FIFPPKPK--DTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKE 309 (434)
T ss_dssp EEECCCHH--HHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCC
T ss_pred EEeCCChH--HhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCc
Confidence 1 122111 1167899999999999884 4589999999776432211111 01 124578999999999999
Q ss_pred EEEEEEcCCCccceEEEEEe-cCCCCCCCCCeee-----eecCCeeEEEeeccccCCCcceeeEEEEeeeCCCC--ceEE
Q psy12425 459 YRVVAENDLGMDSAIVKIQI-SDRPDPPQFPTVE-----DIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS--SWIR 530 (591)
Q Consensus 459 y~c~a~n~~g~~~~~~~~~v-~~~p~~p~~~~~~-----~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~--~~~~ 530 (591)
|+|.|.|..|.......+.+ ...+.+|. +.+. ......+.|.|...... + ..-.+.|...+.. ....
T Consensus 310 Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~-v~~~~~~~~~~~~~~~~L~C~~~g~~---P-~~~~v~W~k~g~~l~~~~~ 384 (434)
T 1igy_B 310 FKCRVNSAAFPAPIEKTISKTKGKPRAPQ-VYTIPPPKEQMAKDKVSLTCMITDFF---P-EDITVEWQSDGQAPENYKN 384 (434)
T ss_dssp CBCCBCCSSCSSCCCCCCCCCCSCCBCCC-CEEECCCSSSSSSSEEEEEEEEEEEB---C-SCEEEEEEETTSCCSCCEE
T ss_pred EEEEEECCCCCCceeEEEeccCCCCcCCE-EEEECCCHHHhcCCcEEEEEEEEeeE---C-CCeEEEEEECCEecCCcee
Confidence 99999999997633333322 11222332 1211 12345688888753211 1 0112333322211 0000
Q ss_pred -----ecee---eeeEEEEcCcccCceEEEEEEEEcCCcC
Q psy12425 531 -----VGNT---RFTTMAITGLSPGHQYEFRVYAENVYGR 562 (591)
Q Consensus 531 -----~~~~---~~~~~~i~~l~~~~~Y~~~v~A~n~~G~ 562 (591)
..++ ....+.|......+.+.|+|+|.|....
T Consensus 385 ~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 385 TQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp CCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred ccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 0111 1123455544445578999999998754
No 160
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.85 E-value=1.2e-20 Score=160.60 Aligned_cols=176 Identities=22% Similarity=0.263 Sum_probs=131.8
Q ss_pred eeccccceeccccEEEEEE-EcCCCC-CeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce
Q psy12425 297 VPLRNANAIQNHNAQFQCT-ITGCPK-PTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK 374 (591)
Q Consensus 297 ~~~~~~~~~~g~~~~l~c~-~~~~p~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~ 374 (591)
..+....+.+|+.+.|.|. +.+.|. +.+.|++++..+...............+|.|.++..+|+|.|+|.+.|..+..
T Consensus 13 ~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~ 92 (201)
T 3s97_C 13 EERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK 92 (201)
T ss_dssp SCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTE
T ss_pred CCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCc
Confidence 3445677899999999999 888898 99999999877743222222222223479999999999999999999977655
Q ss_pred ee---eeEEEEec-------CCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCee
Q psy12425 375 ST---KAELIIMT-------APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 444 (591)
Q Consensus 375 ~~---~~~l~v~~-------~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 444 (591)
.. ...+.+.. +|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+.... .+. ....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~--~~~--~~~~ 165 (201)
T 3s97_C 93 SVFSKFIPLIPIPERTTKPYPADIVVQF---KDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA--EIS--TSGA 165 (201)
T ss_dssp EEECCCEEEEEECCSSCCCEEEEEEEEC---CCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTC--EEE--TTTT
T ss_pred chhhcccceeeccccccCCCCCceEecC---CceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCce--eec--CCCC
Confidence 43 23333321 22222222 14567889999999999999999999999998775432 222 2456
Q ss_pred EEEEeccCCCcceeEEEEEEcCCCccceEEEEEec
Q psy12425 445 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 445 ~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
.|.|.++..+|.|.|+|.|.|..|..+..+.|.|+
T Consensus 166 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 166 VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 89999999999999999999999999888888775
No 161
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.84 E-value=3e-20 Score=155.98 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=64.1
Q ss_pred ceeeeecCCeEEEEEE---eccCCCceEEEEECCEEee-----------------cCCceeEEEeCCeEEEEEcccCCCC
Q psy12425 3 NALYIPEGDNTKVKIF---YAGDQPMEVSLTKNGRVVQ-----------------SDDRFKFTVLDDYIIIFIKEIRKED 62 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~---~~~~p~~~v~W~~~~~~~~-----------------~~~~~~~~~~~~~~~l~i~~~~~~d 62 (591)
+++++..|++++|.|. +.+.|.+.|.|+|+|..+. ...++.+....+...|.|.+++.+|
T Consensus 1 q~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 1 QAVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISH 80 (203)
T ss_dssp -CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHH
Confidence 4689999999999995 5678999999999873211 1234455566777899999999999
Q ss_pred ceEEEEEEEcCCeeeEEEEEEEE
Q psy12425 63 AGDYTVNLSNSSGSVSGTFTINI 85 (591)
Q Consensus 63 ~g~Y~c~~~n~~g~~~~~~~l~v 85 (591)
+|.|+|.|.|..|..+..+.|.|
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V 103 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSV 103 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEE
T ss_pred CeEEEEEEEcCCCcEEEEEEEEe
Confidence 99999999998777665555554
No 162
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.84 E-value=1.9e-19 Score=170.49 Aligned_cols=374 Identities=15% Similarity=0.127 Sum_probs=140.3
Q ss_pred CCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEE--eec--CcceEEEcCCcCCcEEEEEEEEEc
Q psy12425 92 PIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIS--TTC--HDTTFIVQGLTEGQEYLFHVMAVN 167 (591)
Q Consensus 92 p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~--~~~--~~~~~~i~~l~~~~~y~~~~~a~n 167 (591)
|.+ +.+... ...+.|+|.++... ...+. |.|+++..+...|.... ... ....++..+|.++..|.|||.|.|
T Consensus 11 P~n-v~~~~~-~~~~~L~W~p~~~~-~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~A~n 86 (414)
T 3se4_A 11 PQK-VEVDII-DDNFILRWNRSDES-VGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK 86 (414)
T ss_dssp CCC-CCEEEE-TTEEEEC-----------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEEEEE
T ss_pred Cce-eEEEEE-CCceEEEEcCCCCC-CCCeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEEEee
Confidence 444 455554 45689999998854 34666 99999987777887542 222 334455567899999999999999
Q ss_pred cCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCC------cceEEEEEEeeecCCCccEEEEe
Q psy12425 168 ENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGG------SRIQGYWIDKHEVGSDAWQRVNV 241 (591)
Q Consensus 168 ~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~------~~~~~y~~~~~~~~~~~~~~~~~ 241 (591)
.+.+..+......... .....+|. +.+. ....++.|+|. |...++ ..+.+|.+.+...+........
T Consensus 87 -~~~S~~s~~~~~~~~~--~~~~~pP~-v~~~-~~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~- 159 (414)
T 3se4_A 87 -ENTSSWYEVDSFTPFR--KAQIGPPE-VHLE-AEDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE- 159 (414)
T ss_dssp -TTEEEEEECCCBCHHH--HCCCCCCE-EEEE-ECSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEE-
T ss_pred -CCcCCCEecCceeecc--cceeCCCe-EEEE-EcCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEe-
Confidence 5544432211111110 01223343 4444 34568999999 653332 2567899999887665543322
Q ss_pred eecCCceeeecCcccCCcEEEEEEEEcC--CCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCC
Q psy12425 242 AICAPSQINIPNLIEGRQYEFRVYAQNE--AGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGC 319 (591)
Q Consensus 242 ~~~~~~~~~i~~l~~~~~~~y~c~a~n~--~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~ 319 (591)
.....+.|.+|.++..|.++++|.|. .|.+..+... .+......+..+|. .|.|....
T Consensus 160 --~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~-~~~t~~~~~~~~P~----------------~v~~~~~~- 219 (414)
T 3se4_A 160 --NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVH-CIKTTVENELPPPE----------------NIEVSVQN- 219 (414)
T ss_dssp --EECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCE-EEECCSCCSSCCCE----------------EEEEEEET-
T ss_pred --cCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCccc-ccccccccccCCCC----------------ccEEEEec-
Confidence 24578999999999999999999994 4555544322 22221111112221 22222221
Q ss_pred CCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCccccee
Q psy12425 320 PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAY 399 (591)
Q Consensus 320 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~ 399 (591)
....+.|...... .. |............ .
T Consensus 220 ~~~~l~W~pp~~~----~~------------------------Y~v~y~~~~~~~~-------------~---------- 248 (414)
T 3se4_A 220 QNYVLKWDYTYAN----MT------------------------FQVQWLHAFLKRN-------------P---------- 248 (414)
T ss_dssp TEEEEEEECSSSS----CE------------------------EEEEEEESGGGSC-------------C----------
T ss_pred CCeEEEECCCCCC----eE------------------------EEEEEEehhcccc-------------c----------
Confidence 1234667542110 01 1111110000000 0
Q ss_pred ecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEe-ccCCCcceeEEEEEEcCCCccceEEEEEe
Q psy12425 400 FDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIR-DASNVDTAPYRVVAENDLGMDSAIVKIQI 478 (591)
Q Consensus 400 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~~~g~y~c~a~n~~g~~~~~~~~~v 478 (591)
++ + .-.|..-. .. .........+. ++.....|.+++.|.|..|.+..+....+
T Consensus 249 ---~~---------~----~~~w~~~~----~~------~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~ 302 (414)
T 3se4_A 249 ---GN---------H----LYKWKQIP----DC------ENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKF 302 (414)
T ss_dssp ---CC---------------CCCCBCS----TT------TTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEE
T ss_pred ---cc---------c----ccCceECC----Cc------cCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccccc
Confidence 00 0 00111000 00 00011222232 57777779999999999988754433333
Q ss_pred c----CCCCCCCCCeeeeecCCeeEEEeeccccCCC-----cceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCce
Q psy12425 479 S----DRPDPPQFPTVEDIGHDSLALVWRAPIWDGG-----SNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQ 549 (591)
Q Consensus 479 ~----~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~-----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~ 549 (591)
. .+|.+|. +.+.. ..+++.|+|++|...++ ..+.+|.|.|...+........ .....+.|.+|.|++.
T Consensus 303 ~t~~~~~~~pP~-l~~~~-~~~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~-~~~~~~~l~~L~p~t~ 379 (414)
T 3se4_A 303 DTEIQAFLLPPV-FNIRS-LSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKII-EKKTDVTVPNLKPLTV 379 (414)
T ss_dssp ETTCC---------------------------------------------------------------------------
T ss_pred cchhccccCCCe-EEEEE-CCCeEEEEEECCCCccccchhhcCCeEEEEEEEECCCCceEEEE-ecCCeEEeCCCCCCCe
Confidence 2 2456777 77764 45799999998865443 2568898887655432211122 3557899999999999
Q ss_pred EEEEEEEEcC----CcCCCCCCCcceEEecc
Q psy12425 550 YEFRVYAENV----YGRSDPSTTSDLITTYG 576 (591)
Q Consensus 550 Y~~~v~A~n~----~G~~~~s~~~~~~~t~~ 576 (591)
|.|+|+|.+. .|.|+.|....+.|+++
T Consensus 380 Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~~ 410 (414)
T 3se4_A 380 YCVKARAHTMDEKLNKSSVFSDAVCEKTKPG 410 (414)
T ss_dssp -------------------------------
T ss_pred EEEEEEEEecccccCCCCCCCCCEeEEeCCC
Confidence 9999999993 58999998876655443
No 163
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.84 E-value=2.1e-20 Score=158.10 Aligned_cols=170 Identities=15% Similarity=0.120 Sum_probs=119.7
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+. ..+.+|+.+.|.|.+.+.|. .+.|++++..+....... ........|.|.++..+|+|.|+|.|.|.
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP-QELVKKGQFPIPSITWEHTGRYRCYYGSD 80 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC-HHHHTTTEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc-ccCCcccEEEECCCCHHHCeEEEEEEECC
Confidence 4677776665 47889999999999998876 799999987653111100 00112237999999999999999999998
Q ss_pred C-cc--eeeeeEEEEecC---CcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccc-eEEE-ecCC
Q psy12425 371 G-GV--KSTKAELIIMTA---PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGH-FHVE-TSER 442 (591)
Q Consensus 371 ~-g~--~~~~~~l~v~~~---p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~-~~~~-~~~~ 442 (591)
. |. .+..+.|.|... |.+...+ ...+..|+.+.|.|.+.+. .+.+.|+++|..+..... +... ....
T Consensus 81 ~~g~~~~s~~~~l~V~~~~~~p~i~~~~----~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~ 155 (198)
T 1ugn_A 81 TAGRSESSDPLELVVTGAYIKPTLSAQP----SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSS 155 (198)
T ss_dssp TTEECCCCCCEEEEEECSSCCCEEEEES----CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CC
T ss_pred CCCcccCCccEEEEEcccccCCccccCC----ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcc
Confidence 7 63 355677888762 3332222 2456789999999999988 789999999987643221 1111 1234
Q ss_pred eeEEEEeccCCCcceeEEEEEEcCCC
Q psy12425 443 HAILTIRDASNVDTAPYRVVAENDLG 468 (591)
Q Consensus 443 ~~~l~i~~~~~~~~g~y~c~a~n~~g 468 (591)
...|.|.++..+|+|.|+|.|.|..+
T Consensus 156 ~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 156 RAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred eeEEEecccCcccCeEEEEEEEeCCC
Confidence 68999999999999999999999876
No 164
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.84 E-value=3.7e-17 Score=153.32 Aligned_cols=302 Identities=18% Similarity=0.202 Sum_probs=205.8
Q ss_pred EeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEE
Q psy12425 46 VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 125 (591)
Q Consensus 46 ~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~ 125 (591)
...+...+.|.+|.+...|.|++.|.|..|..... ...+...+.+|.. +.+......++.|+|.+|. +..+.+|.
T Consensus 53 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~-~~~~~~~~~~p~~-l~~~~~~~~si~l~W~~p~---~~~~~~Y~ 127 (368)
T 1fnf_A 53 VHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPI-SDTIIPAVPPPTD-LRFTNIGPDTMRVTWAPPP---SIDLTNFL 127 (368)
T ss_dssp ECTTCCEEECCCCCTTSCEEEEEEEEETTEECCCE-EEEECCCCCCCEE-EEEESCCSSCEEEEEECCT---TCCCSEEE
T ss_pred ecCCcCEEEECCCCCCCEEEEEEEEEcCCCccCce-eeeecCCCcCCce-eEEEEcCCCeEEEEeeCCC---CCCCcEEE
Confidence 34445688999999999999999999998865432 3333333333333 5566667889999999885 35688999
Q ss_pred EEEEecCCC-ceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCC
Q psy12425 126 VERRDISMP-HWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD 204 (591)
Q Consensus 126 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 204 (591)
+.+...... .|...........+.+.+|.+++.|.|+|.|.|..|.+...... . ...|.+|..+.+......
T Consensus 128 v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~----~---~~~~~~P~~l~~~~~~~~ 200 (368)
T 1fnf_A 128 VRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR----Q---KTGLDSPTGIDFSDITAN 200 (368)
T ss_dssp EEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEE----E---ECCCCCCEEEEEESCCSS
T ss_pred EEEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeEee----e---cCCCCCCCccEEEEccCC
Confidence 999876543 56665555677899999999999999999999998876543211 1 124455666677777889
Q ss_pred eEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEE
Q psy12425 205 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQI 284 (591)
Q Consensus 205 ~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~ 284 (591)
++.|+|.++. ..+.+|.+.+...+................+.+.+|.++..|.|++.|.|..|.+..+. ...
T Consensus 201 sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~----~~~ 272 (368)
T 1fnf_A 201 SFTVHWIAPR----ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI----GQQ 272 (368)
T ss_dssp EEEEEEECCS----SCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEE----EEE
T ss_pred EEEEEEeCCC----CCcCEEEEEEecCCCCCCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCccc----ccc
Confidence 9999999862 36889999998765432222233334667899999999999999999999988765421 111
Q ss_pred cCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCC--eeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceE
Q psy12425 285 KDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP--TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADE 362 (591)
Q Consensus 285 ~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 362 (591)
.. .+.+|..+. ........+.|.|.....+.. .|.|...+.. .........+....+.+.+|.+...|.
T Consensus 273 ~t--~p~~P~~l~----~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~p~t~Y~ 343 (368)
T 1fnf_A 273 ST--VSDVPRDLE----VVAATPTSLLISWDAPAVTVRYYRITYGETGGN---SPVQEFTVPGSKSTATISGLKPGVDYT 343 (368)
T ss_dssp EC--CCCSCEEEE----EEEEETTEEEEEEECCSSCCSEEEEEEEETTCC---SCCEEEEEETTCCEEEECSCCTTCCEE
T ss_pred cC--CCCCCCeeE----EEecCCCEEEEEeeCCCCccceEEEEEEECCCC---CccEEEEcCCCeeEEEecCCCCCCEEE
Confidence 11 123332221 112345678888876443322 3444432211 112233344555689999999999999
Q ss_pred EEEEEEeCCcceee
Q psy12425 363 YVCRAVNKGGVKST 376 (591)
Q Consensus 363 y~c~a~n~~g~~~~ 376 (591)
|++.|.|..|.+..
T Consensus 344 ~~V~A~~~~G~g~~ 357 (368)
T 1fnf_A 344 ITVYAVTGRGDSPA 357 (368)
T ss_dssp EEEEEECCCSSSCC
T ss_pred EEEEEeCCCCcCcc
Confidence 99999999987643
No 165
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.84 E-value=2.3e-17 Score=155.09 Aligned_cols=302 Identities=14% Similarity=0.144 Sum_probs=207.4
Q ss_pred EeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEE
Q psy12425 46 VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYV 125 (591)
Q Consensus 46 ~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~ 125 (591)
...+...+.|.+|.+...|.|++.|.|..|.............| +|.. +.+......++.|+|.++. +..+.+|.
T Consensus 54 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~p-~p~~-l~~~~~~~~si~l~W~~~~---~~~i~~Y~ 128 (375)
T 3t1w_A 54 VHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVP-QLTD-LSFVDITDSSIGLRWTPLN---SSTIIGYR 128 (375)
T ss_dssp EETTCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECCCCC-CCSC-CEEECCCSSEEEEECCCCC---CTTEEEEE
T ss_pred cCCCccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCCCC-CCce-EEEEecCCCeEEEEEECCC---CCCceEEE
Confidence 34455689999999999999999999988765443333333333 2333 5667778899999999875 45789999
Q ss_pred EEEEecCCCc-eEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCC
Q psy12425 126 VERRDISMPH-WICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD 204 (591)
Q Consensus 126 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 204 (591)
+.+...+... +...........+.+.+|.+++.|.|+|.|.|..|.+..+..... . .+.+|..+.+.....+
T Consensus 129 v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~----t---~~~~p~~l~~~~~~~~ 201 (375)
T 3t1w_A 129 ITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQ----T---AVPPPTDLRFTNIGPD 201 (375)
T ss_dssp EEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEEE----C---CCCCCEEEEEESCCSS
T ss_pred EEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeee----c---CCCCCceeEEEecccC
Confidence 9998765543 344444567789999999999999999999999998766543211 1 2336666777777889
Q ss_pred eEEEEEecCCCCCCcceEEEEEEeeecCC-CccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEE
Q psy12425 205 FVNLSWDKPLDDGGSRIQGYWIDKHEVGS-DAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQ 283 (591)
Q Consensus 205 ~v~l~w~~~~~~~~~~~~~y~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~ 283 (591)
++.|+|.++. +..+.+|.+.++..+. ..|..... ......+.+.+|.++..|.|++.|.|..|.+.... ..
T Consensus 202 si~l~W~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~----~~ 273 (375)
T 3t1w_A 202 TMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSI-SPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR----GR 273 (375)
T ss_dssp CEEEEEECCS---SCCCCEEEEEEEEGGGTTCCEEEEE-CTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE----EE
T ss_pred EEEEEEcCCC---CCCccEEEEEEEeCCCCCCcEEEEc-CCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCcee----eE
Confidence 9999999863 3468899999987654 34444433 23458899999999999999999999888765321 11
Q ss_pred EcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCC--eeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccce
Q psy12425 284 IKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP--TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDAD 361 (591)
Q Consensus 284 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 361 (591)
... .+.+|.-+.. .......+.|.|.....+.. .|.|...+.. .........+....+.|.+|.+...|
T Consensus 274 ~~t--~p~~P~~l~~----~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y 344 (375)
T 3t1w_A 274 QKT--GLDSPTGIDF----SDITANSFTVHWIAPRATITGYRIRHHPEHFS---GRPREDRVPHSRNSITLTNLTPGTEY 344 (375)
T ss_dssp EEC--CCCCCEEEEE----ESCCSSCEEEEEECCSSCCSEEEEEEEETTCC---SSCEEEEEETTCCEEEECSCCTTCEE
T ss_pred Eec--CCCCCCccEe----eeccCCEEEEEECCCCcceeeEEEEEEECCCC---CcceeEEcCCCccEEEECCCCCCCEE
Confidence 111 1233332211 11235678888876432222 3455443221 12223344455568899999999999
Q ss_pred EEEEEEEeCCcceee
Q psy12425 362 EYVCRAVNKGGVKST 376 (591)
Q Consensus 362 ~y~c~a~n~~g~~~~ 376 (591)
.|++.|.|..|.+..
T Consensus 345 ~~~V~A~~~~G~s~p 359 (375)
T 3t1w_A 345 VVSIVALNGREESPL 359 (375)
T ss_dssp EEEEEEEETTEECCC
T ss_pred EEEEEEECCCCCCCc
Confidence 999999999887743
No 166
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.83 E-value=3.7e-19 Score=150.47 Aligned_cols=70 Identities=20% Similarity=0.317 Sum_probs=62.7
Q ss_pred ceeeeecCCeEEEEEEecc-CCCceEEEEECCEEeecCCceeEEEeC--CeEEEEEcccCCCCceEEEEEEEc
Q psy12425 3 NALYIPEGDNTKVKIFYAG-DQPMEVSLTKNGRVVQSDDRFKFTVLD--DYIIIFIKEIRKEDAGDYTVNLSN 72 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~Y~c~~~n 72 (591)
.+++|.+|+.+.|.|.+.+ .|.|.|.|+|||+.|..+.++++.... +..+|.|.+++++|+|.|+|.|.|
T Consensus 10 ~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 10 LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 4688999999999999965 799999999999999988888877654 557899999999999999999998
No 167
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.83 E-value=1.8e-19 Score=148.51 Aligned_cols=164 Identities=16% Similarity=0.279 Sum_probs=128.7
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCC-CCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCP-KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
++|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++++..+..... .+.+.++..+|+|.|+|.+.|
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETT
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeC
Confidence 456777777777899999999999999987 679999999988765422 356778999999999999987
Q ss_pred CCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeee-ccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEE
Q psy12425 370 KGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFT-GYPKPKITWYRDNEVIESGGHFHVETSERHAILTI 448 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i 448 (591)
.. .+....|.|..++.+...+. ..+..|+.+.|.|.+. +.|.+.+.|+++|..+.. ......|.|
T Consensus 73 ~~--~s~~~~l~v~~~~~~~~~~~----~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~--------~~~~~~L~i 138 (170)
T 3ry4_A 73 TS--LSDPVHLTVLFEWLVLQTPH----LEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF--------SHLDPTFSI 138 (170)
T ss_dssp SB--CCCCEEEEEECCSEEEECSC----SEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE--------ESSCCEEEE
T ss_pred CC--ceEeEEEEEECCceEecCCC----ceeecCCeEEEEEECCCCCCCceEEEEECCeEccc--------cCCCCeEEE
Confidence 43 34467777877665444332 3567899999999995 557799999999987642 234678999
Q ss_pred eccCCCcceeEEEEEEcCCCc-cceEEEEEe
Q psy12425 449 RDASNVDTAPYRVVAENDLGM-DSAIVKIQI 478 (591)
Q Consensus 449 ~~~~~~~~g~y~c~a~n~~g~-~~~~~~~~v 478 (591)
.++..+|.|.|+|.|.|..|. .+..+.|.|
T Consensus 139 ~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 139 PQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 999999999999999999987 455666655
No 168
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.83 E-value=1e-18 Score=147.93 Aligned_cols=192 Identities=43% Similarity=0.775 Sum_probs=157.9
Q ss_pred ecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEEEEE
Q psy12425 86 TGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMA 165 (591)
Q Consensus 86 ~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a 165 (591)
.+.|.+|.. +.+......++.|+|.+|...++..+..|.+.++......|...........+.+.+|.+++.|.|+|.|
T Consensus 3 ~~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a 81 (197)
T 3lpw_A 3 MDTPGPPQD-LKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLA 81 (197)
T ss_dssp CCSCCCCEE-EEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEE
T ss_pred CCCCCCCCC-cEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEE
Confidence 356677765 5677788999999999987777778999999999988888888777778899999999999999999999
Q ss_pred EccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecC
Q psy12425 166 VNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICA 245 (591)
Q Consensus 166 ~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 245 (591)
.|..|.+..+......+. ...|.+|..+.+......++.|+|.+|...++..+.+|.+.++..+...|..... ..
T Consensus 82 ~~~~g~~~~s~~~~~~t~---~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~ 156 (197)
T 3lpw_A 82 ENEYGIGLPAETAESVKA---SERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT--VK 156 (197)
T ss_dssp EETTEECCCEECSSCEES---CCCCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEE--ES
T ss_pred EcCccccCCCCCccceec---CCCCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeec--cc
Confidence 999998877654333333 3467778888888888999999999987766668999999999888777776543 35
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEE
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQ 283 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~ 283 (591)
...+.+.+|.++..|.|+++|.|..|.+.++..+..+.
T Consensus 157 ~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s~~v~ 194 (197)
T 3lpw_A 157 VTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVI 194 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEE
T ss_pred ccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCcccEe
Confidence 78899999999999999999999999887766655544
No 169
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.83 E-value=8e-20 Score=156.10 Aligned_cols=181 Identities=13% Similarity=0.111 Sum_probs=128.6
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeE--EEEEcceecccceEEEEEEE
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTY--TLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~g~y~c~a~ 368 (591)
.+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|++..+..... ......... .|.|.+++..|+|.|+|.|.
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 4677776655 46889999999999987 6789999998776532111 110111223 79999999999999999999
Q ss_pred eCCcce--eeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCe
Q psy12425 369 NKGGVK--STKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERH 443 (591)
Q Consensus 369 n~~g~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 443 (591)
|..|.. +....|.|.. +|.+...+ ...+.+|+.++|.|.+.+.|.+.+.|+++|..+... .......
T Consensus 85 n~~~~~~~s~~~~l~V~~~~~~P~i~~~p----~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~----~~~~~~~ 156 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTGLYGKPFLSADR----GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ----HQSGEHP 156 (218)
T ss_dssp ETTTEEEECCCEEEEEECSSCCCEEEESS----CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS----EEECSSS
T ss_pred cCCCceeecCCEEEEEcCcccCCEEEeCC----CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc----ccCCCcc
Confidence 987643 3446777765 33333222 235689999999997777788999999999866431 1233457
Q ss_pred eEEEEeccCCCcceeEEEEEEcCCC-----ccceEEEEEecCCC
Q psy12425 444 AILTIRDASNVDTAPYRVVAENDLG-----MDSAIVKIQISDRP 482 (591)
Q Consensus 444 ~~l~i~~~~~~~~g~y~c~a~n~~g-----~~~~~~~~~v~~~p 482 (591)
..|.|.++..+|+|.|+|.|.|..+ ..+..+.|.|.+.+
T Consensus 157 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 157 ANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp EEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC---
T ss_pred CEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecCC
Confidence 8999999999999999999998642 23566677776543
No 170
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.83 E-value=6.7e-19 Score=148.52 Aligned_cols=78 Identities=14% Similarity=0.281 Sum_probs=64.6
Q ss_pred ceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEE
Q psy12425 3 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 82 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~ 82 (591)
.++.+.+|+++.|.|.+.|.|.+.+.|+|++..+....++.+ .++...|.|.+++.+|+|.|+|.+.|..|.....+.
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 89 (192)
T 2va4_A 12 FNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL--KGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAF 89 (192)
T ss_dssp EEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEE--ETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEE--eCCeeEEEEecCChhcCcEEEEEEEccccccceEEE
Confidence 367899999999999999999999999999999987766554 344458999999999999999999887665443333
No 171
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.83 E-value=6.4e-19 Score=152.59 Aligned_cols=177 Identities=16% Similarity=0.164 Sum_probs=119.8
Q ss_pred cccceeccccEEEEEEEcCCCCC---eeEEecCCccCC-----------------CCCceEEEE---eCCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCPKP---TISWLKGSREIT-----------------PSARHHIFA---EGDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p~~---~v~W~~~~~~~~-----------------~~~~~~~~~---~~~~~~l~i~~~~ 356 (591)
..+.+.+|+++.|.|.+.+.+.+ .|.|++++.... ...+..... ..+..+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 44668899999999999876554 699998654210 011222221 1235689999999
Q ss_pred cccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeec-cCCCeEEEeeCCeEeeecc-c
Q psy12425 357 GVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKPKITWYRDNEVIESGG-H 434 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~~v~W~~~~~~~~~~~-~ 434 (591)
.+|+|.|+|.|.|..|.......+.+...+. .. .....+..|..+.|.|.+.| .|.|.|.|++++..+.... .
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~--~~---~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~ 166 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAALGS--DL---HVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEA 166 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCC--CC---EEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEEC
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeecccee--cc---cceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCce
Confidence 9999999999999888766555554433222 11 23345678999999999988 5999999998654443222 2
Q ss_pred eEEEec-CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCC
Q psy12425 435 FHVETS-ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDR 481 (591)
Q Consensus 435 ~~~~~~-~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~ 481 (591)
...... +....+.+..+...|.|.|+|.|.|..|.....+.|.+.+|
T Consensus 167 ~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 167 PVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp CCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred EEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 222222 22344556678889999999999999999999999988664
No 172
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.83 E-value=3.5e-19 Score=152.94 Aligned_cols=84 Identities=23% Similarity=0.402 Sum_probs=74.7
Q ss_pred ccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEe-CCeEEEEEcceecccceEEEEEEEeCCcceeeeeE
Q psy12425 301 NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAE-GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAE 379 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~ 379 (591)
...+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+... +....|.|.++..+|.|.|+|.|.|..|.......
T Consensus 126 ~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 205 (212)
T 2r15_A 126 VVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFT 205 (212)
T ss_dssp EEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEE
Confidence 34577899999999999999999999999999988888877766 66789999999999999999999999999888888
Q ss_pred EEEec
Q psy12425 380 LIIMT 384 (591)
Q Consensus 380 l~v~~ 384 (591)
|.|..
T Consensus 206 l~V~~ 210 (212)
T 2r15_A 206 VSVFI 210 (212)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88864
No 173
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.83 E-value=1.7e-20 Score=156.79 Aligned_cols=163 Identities=10% Similarity=0.184 Sum_probs=125.2
Q ss_pred cceeccccEEEEEEEcCCCCCeeEEecCCccCCC--------------CCceEEEE---eCCeEEEEEcceecccceEEE
Q psy12425 302 ANAIQNHNAQFQCTITGCPKPTISWLKGSREITP--------------SARHHIFA---EGDTYTLIINSVYGVDADEYV 364 (591)
Q Consensus 302 ~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~--------------~~~~~~~~---~~~~~~l~i~~~~~~d~g~y~ 364 (591)
+.+.+|+.+.|.|.+.+.|.+.+.|++++..... ..+..+.. ..+..+|.|.+++.+|+|.|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 84 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 84 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence 4578999999999999999999999998753110 11222211 223456999999999999999
Q ss_pred EEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCee
Q psy12425 365 CRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 444 (591)
Q Consensus 365 c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 444 (591)
|.+.|..| .+.|.|...+ .+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+. ....
T Consensus 85 C~~~~~~~----~~~l~V~~~~---~~----~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~----------~~~~ 143 (184)
T 2ny1_B 85 CEVEDQKE----EVQLLVFGLT---AN----SDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI----------QGGK 143 (184)
T ss_dssp EEETTEEE----EEEEEEEEEE---ES----SCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE----------EESS
T ss_pred EEEEcCCC----cEEEEEEEec---CC----CCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc----------cCce
Confidence 99988755 4455555321 11 12356889999999999999999999999876541 1457
Q ss_pred EEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCC
Q psy12425 445 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 485 (591)
Q Consensus 445 ~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p 485 (591)
.|.|.++..+|+|.|+|.|.|..|..+..+.|.|.+.|.+|
T Consensus 144 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~ 184 (184)
T 2ny1_B 144 TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS 184 (184)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC--
T ss_pred EEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCCC
Confidence 89999999999999999999999999999999999888654
No 174
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.83 E-value=5.8e-19 Score=154.90 Aligned_cols=84 Identities=23% Similarity=0.432 Sum_probs=67.7
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCce-eEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRF-KFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|+|..+....+. .........+|.|.+++.+|+|.|+|.+.|..|.....
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 101 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT 101 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEE
Confidence 45689999999999999999999999999999998765433 22333444589999999999999999999887766555
Q ss_pred EEEEE
Q psy12425 81 FTINI 85 (591)
Q Consensus 81 ~~l~v 85 (591)
+.+.|
T Consensus 102 ~~l~V 106 (241)
T 3grw_A 102 YTLDV 106 (241)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55555
No 175
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.83 E-value=6.6e-20 Score=152.75 Aligned_cols=158 Identities=15% Similarity=0.122 Sum_probs=119.1
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+.. .+.+|+.+.|.|.+.+ +.+.+.|++++... . . ....|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~-------~-~--~~~~L~i~~v~~~D~G~Y~C~a~n~ 74 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR-------Y-Q--DQAVLFIPAMKRSLAGRYRCSYQNG 74 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC-------E-E--SSSEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc-------c-C--cccEEEECcCChhhCceEEEEEEcC
Confidence 56777776654 7889999999999988 78899999987651 1 1 2237999999999999999999998
Q ss_pred Ccce--eeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeE
Q psy12425 371 GGVK--STKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI 445 (591)
Q Consensus 371 ~g~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 445 (591)
.|.. +....|.|.. +|.+...+ ...+..|+.+.|.|.+.+.+ +.+.|+++|..+..... .......
T Consensus 75 ~g~~~~s~~~~l~V~~~~~~p~i~~~p----~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~----~~~~~~~ 145 (184)
T 2gi7_A 75 SLWSLPSDQLELVATGVFAKPSLSAQP----GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNP----ERWYRAS 145 (184)
T ss_dssp TEEBCCCCCEEEEEESSSCCCEEEEEC----CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCC----CEEEEES
T ss_pred CCccCCCCCEEEEecCcCCCCEEEeCC----CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceec----CCCceEE
Confidence 8743 4456677744 23333222 23457899999999987655 69999999987654211 1224567
Q ss_pred EEEeccCCCcceeEEEEEEcCCCc
Q psy12425 446 LTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 446 l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
|.|.++..+|+|.|+|.|.|..+.
T Consensus 146 L~i~~v~~~D~G~Y~C~a~n~~~~ 169 (184)
T 2gi7_A 146 FPIITVTAAHSGTYRCYSFSSRDP 169 (184)
T ss_dssp SSEEEETTCCSEEEEEEEECTTST
T ss_pred EEEccCCccCCeEEEEEEEeCCCC
Confidence 899999999999999999998653
No 176
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.82 E-value=1.6e-18 Score=146.03 Aligned_cols=73 Identities=23% Similarity=0.280 Sum_probs=61.6
Q ss_pred CceeeeecCCeEEEEEEeccCC-CceEEEEE-CCEEeec-CCceeEEE-eCCeEEEEEcccCCCCceEEEEEEEcCC
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQ-PMEVSLTK-NGRVVQS-DDRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSNSS 74 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p-~~~v~W~~-~~~~~~~-~~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~c~~~n~~ 74 (591)
|.++.+.+|+++.|.|.+.+.+ .+.+.|+| +|..+.. ..++.+.. ......|.|.+++.+|+|.|+|.+.|..
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 85 (191)
T 1epf_A 9 PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAED 85 (191)
T ss_dssp SSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCC
Confidence 6788999999999999999876 88999999 8888863 35555433 3566899999999999999999998876
No 177
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.82 E-value=3.5e-18 Score=154.38 Aligned_cols=129 Identities=15% Similarity=0.106 Sum_probs=97.8
Q ss_pred CeeEEEEeccCCCcceeEEEEEEcCCCccce-EEEEE-ecCCCCCCCCCeeeeecCCeeEEEeecc-ccCCCcceeeEEE
Q psy12425 442 RHAILTIRDASNVDTAPYRVVAENDLGMDSA-IVKIQ-ISDRPDPPQFPTVEDIGHDSLALVWRAP-IWDGGSNITNYIV 518 (591)
Q Consensus 442 ~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~-~~~~~-v~~~p~~p~~~~~~~~~~~~v~l~W~~p-~~~~~~~~~~y~v 518 (591)
....+.+.+|.+...|.|++.|.|..|.+.. ..... ....|..|..+.+...+.+++.|+|+++ ..+.++.+.+|+|
T Consensus 155 ~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v 234 (290)
T 3l5i_A 155 VHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTI 234 (290)
T ss_dssp CSEEECCSCCCTTCEEEEEEEEEETTEECCCEEEEEESSCCCCSSCCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEE
T ss_pred CcceEEecCcCCccEEEEEEEEEeCCcccccEEEEeEccccCCCCCCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEE
Confidence 4556777899999999999999999987653 22222 2234555557778888999999999943 2234458999999
Q ss_pred EeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcce
Q psy12425 519 EKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDL 571 (591)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~ 571 (591)
+++...+...........+.++|.+|.+++.|.|+|+|.|.+| |..|....+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~ 286 (290)
T 3l5i_A 235 FYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTF 286 (290)
T ss_dssp EEEETTSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEE
T ss_pred EEEeCCCCeEEEEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEe
Confidence 9998765433333456677999999999999999999999999 777776544
No 178
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.82 E-value=3e-17 Score=160.01 Aligned_cols=224 Identities=14% Similarity=0.146 Sum_probs=135.6
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCC----------CCCCCCCcceEEEcCCCccCCCeEEee-ccccceeccccEEEEE
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAG----------LSLPSSASNSVQIKDPMAAKAPEIIVP-LRNANAIQNHNAQFQC 314 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g----------~~~~s~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~g~~~~l~c 314 (591)
...|.|.+++..|.|.|.|.+.+..+ ..........+.+.... ..+|.+... +.......++.+.|.|
T Consensus 79 ~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~i~~~~~~~~~~~~~~~v~L~C 157 (512)
T 1zvo_C 79 QFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAP-TKAPDVFPIISGCRHPKDNSPVVLAC 157 (512)
T ss_pred EEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccC-CcCCeEEeccCCcccccCCCeEEEEE
Confidence 36899999999999999999988642 00001122344444211 234555421 1111123468999999
Q ss_pred EEcCC-CCC-eeEEecCCccCCCCCceEEEE-eCC---eEEEEEcceecccceEEEEEEEeCCcceeeee----------
Q psy12425 315 TITGC-PKP-TISWLKGSREITPSARHHIFA-EGD---TYTLIINSVYGVDADEYVCRAVNKGGVKSTKA---------- 378 (591)
Q Consensus 315 ~~~~~-p~~-~v~W~~~~~~~~~~~~~~~~~-~~~---~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~---------- 378 (591)
.+.+. |.+ .|.|++++............. ++. ...|.|.....+ .|.|+|.|.|..+......
T Consensus 158 ~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~ 236 (512)
T 1zvo_C 158 LITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQ 236 (512)
T ss_pred EEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcC
Confidence 99886 665 899999654321000000111 121 125788777777 8999999999988764443
Q ss_pred -EEEEecCCcc----------------------------------------------cCCCCc----ccceeecCCCeEE
Q psy12425 379 -ELIIMTAPKF----------------------------------------------NVPPRF----RDTAYFDKGENVV 407 (591)
Q Consensus 379 -~l~v~~~p~~----------------------------------------------~~~~~~----~~~~~~~~g~~~~ 407 (591)
.+.+..+|.+ ..+|.. .....+..|+.+.
T Consensus 237 ~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~ 316 (512)
T 1zvo_C 237 ASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKAT 316 (512)
T ss_pred CEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceE
Confidence 2344333320 001110 0111245799999
Q ss_pred EEEeeeccCC--CeEEEeeCCeEeeeccce-EEEe-cC----CeeEEEEeccCCCcceeEEEEEEcCCCccc
Q psy12425 408 VKIPFTGYPK--PKITWYRDNEVIESGGHF-HVET-SE----RHAILTIRDASNVDTAPYRVVAENDLGMDS 471 (591)
Q Consensus 408 l~c~~~~~p~--~~v~W~~~~~~~~~~~~~-~~~~-~~----~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~ 471 (591)
|.|.+.|..+ ..|.|+++|..+...... .... .+ ..+.|.|.....+|.|.|+|.|.|..+...
T Consensus 317 L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~ 388 (512)
T 1zvo_C 317 FTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ 388 (512)
T ss_pred EEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC
Confidence 9999998644 389999999876421110 1111 11 135688999999999999999999987654
No 179
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.82 E-value=3e-19 Score=153.33 Aligned_cols=171 Identities=14% Similarity=0.219 Sum_probs=124.8
Q ss_pred ccceeccccEEEEEEEcCCCCCeeEEecC--CccC------------CCCCceEEEEeCCeEEEEEcceecccceEEEEE
Q psy12425 301 NANAIQNHNAQFQCTITGCPKPTISWLKG--SREI------------TPSARHHIFAEGDTYTLIINSVYGVDADEYVCR 366 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p~~~v~W~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~ 366 (591)
.+.+.+|+.+.|.|.+.+.|.+.+.|++. +... ....++.+...+...+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 55688999999999999999999999982 2111 123466666677788999999999999999999
Q ss_pred EEeCCc---ceeeeeEEEEe----cCCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeCCeEeeeccceE-
Q psy12425 367 AVNKGG---VKSTKAELIIM----TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRDNEVIESGGHFH- 436 (591)
Q Consensus 367 a~n~~g---~~~~~~~l~v~----~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~~~~~~~~- 436 (591)
|.|..| .......|.|. .+|.+...+. ...+..|+.+.|.|.+.+. |+ +.+.|+++|..+..+....
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~---~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~ 165 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPP---SSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQ 165 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCCBCCEEEEECC---CHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECC
T ss_pred eccCCcceeEEcCceEEEEeCCCCCCCeEEccCC---CcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCC
Confidence 999988 34566788887 4444433221 1223479999999999986 33 4999999999885421110
Q ss_pred -EEecC---CeeEEEEeccCCCcceeEEEEEEcCCCccceEE
Q psy12425 437 -VETSE---RHAILTIRDASNVDTAPYRVVAENDLGMDSAIV 474 (591)
Q Consensus 437 -~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~ 474 (591)
....+ ....|.|..+..+|.|.|+|.|.|..+.....+
T Consensus 166 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 166 PSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp CEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred cCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 11111 135689999999999999999999986654443
No 180
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.82 E-value=2.5e-18 Score=145.58 Aligned_cols=192 Identities=40% Similarity=0.668 Sum_probs=154.3
Q ss_pred CCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEE
Q psy12425 188 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQ 267 (591)
Q Consensus 188 ~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~ 267 (591)
.+|.+|..+.+.....+++.|+|.++...++..+.+|.++++..+...|...... .....+.+.+|.++..|.|+|+|.
T Consensus 4 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~ 82 (197)
T 3lpw_A 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-CHKTSWKVDQLQEGCSYYFRVLAE 82 (197)
T ss_dssp CSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-ECSSEEEECCCCTTCEEEEEEEEE
T ss_pred CCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-CCccEEEEcCCCCCCEEEEEEEEE
Confidence 4778888888888899999999999866666679999999998887788776543 366889999999999999999999
Q ss_pred cCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCe
Q psy12425 268 NEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDT 347 (591)
Q Consensus 268 n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 347 (591)
|..|.+..+......
T Consensus 83 ~~~g~~~~s~~~~~~----------------------------------------------------------------- 97 (197)
T 3lpw_A 83 NEYGIGLPAETAESV----------------------------------------------------------------- 97 (197)
T ss_dssp ETTEECCCEECSSCE-----------------------------------------------------------------
T ss_pred cCccccCCCCCccce-----------------------------------------------------------------
Confidence 977654311000000
Q ss_pred EEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCe
Q psy12425 348 YTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNE 427 (591)
Q Consensus 348 ~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~ 427 (591)
T Consensus 98 -------------------------------------------------------------------------------- 97 (197)
T 3lpw_A 98 -------------------------------------------------------------------------------- 97 (197)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCCCeeeeecCCeeEEEeecccc
Q psy12425 428 VIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIW 507 (591)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~ 507 (591)
....+|.+|.++.+...+.+++.|+|.+|..
T Consensus 98 -------------------------------------------------t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~ 128 (197)
T 3lpw_A 98 -------------------------------------------------KASERPLPPGKITLMDVTRNSVSLSWEKPEH 128 (197)
T ss_dssp -------------------------------------------------ESCCCCCCCSCEEEEEECSSCEEEEECCCSC
T ss_pred -------------------------------------------------ecCCCCCCCcccEEEeccCCeEEEEecCCCc
Confidence 0002366777788877888999999999877
Q ss_pred CCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEEe
Q psy12425 508 DGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 574 (591)
Q Consensus 508 ~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t 574 (591)
+++..+.+|.|+++..+...|........+.+.+.+|.+++.|.|+|+|.|..|.|++|..+..++.
T Consensus 129 ~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s~~v~~ 195 (197)
T 3lpw_A 129 DGGSRILGYIVEMQTKGSDKWATCATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVIA 195 (197)
T ss_dssp CTTSCCCEEEEEEEETTCSCCEEEEEESSSEEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEEC
T ss_pred CCCCcccEEEEEEEeCCCCceEEeecccccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCcccEec
Confidence 7777899999999988888888877777889999999999999999999999999999988766554
No 181
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.82 E-value=4.7e-20 Score=151.80 Aligned_cols=155 Identities=17% Similarity=0.218 Sum_probs=115.9
Q ss_pred cceeccccEEEEEEEcC--CCCCeeEEecCCccC----------CCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 302 ANAIQNHNAQFQCTITG--CPKPTISWLKGSREI----------TPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 302 ~~~~~g~~~~l~c~~~~--~p~~~v~W~~~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
+.+.+|+.+.|.|.... .+.+.|.|++++..+ ....++.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g---sL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG---DLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS---CEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC---cEEEcccccccCEEEEEEEEe
Confidence 45788999999995433 556789999988533 123455554344 499999999999999999999
Q ss_pred CCcce--eeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEE
Q psy12425 370 KGGVK--STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILT 447 (591)
Q Consensus 370 ~~g~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~ 447 (591)
..|.. ...+.|.|..++. .|. ....+..+.|.|.+.|.|.|.+.|+++|..+..... +.
T Consensus 83 ~~g~~~~~~~~~l~V~~~~~---~p~-----i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-----------~~ 143 (176)
T 1hng_A 83 TNGTRILNKALDLRILEMVS---KPM-----IYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KT 143 (176)
T ss_dssp TTCCEEEEEEEEEEEECCCC---CCE-----EEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESS-----------SE
T ss_pred CCCCEEEEEEEEEEEeCCCC---CCE-----EEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc-----------EE
Confidence 99886 5567777776432 111 112344589999999999999999999988764433 34
Q ss_pred EeccCCCcceeEEEEEEcCCCccceEEEEEe
Q psy12425 448 IRDASNVDTAPYRVVAENDLGMDSAIVKIQI 478 (591)
Q Consensus 448 i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v 478 (591)
|..+..+|.|.|+|.|.|..|..+....|.+
T Consensus 144 i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 144 MSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 4467799999999999999998877665543
No 182
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.82 E-value=1.7e-18 Score=144.44 Aligned_cols=73 Identities=23% Similarity=0.408 Sum_probs=63.0
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCC--eEEEEEcccCCCCceEEEEEEEcCC
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDD--YIIIFIKEIRKEDAGDYTVNLSNSS 74 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~Y~c~~~n~~ 74 (591)
|.++.+.+|+++.|.|.+.+.|.+.+.|+|++..+....+..+...+. ...|.|.+++.+|+|.|+|.+.|..
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 83 (182)
T 1rhf_A 9 PVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGG 83 (182)
T ss_dssp CEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCT
T ss_pred CcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCC
Confidence 678899999999999999999999999999999998776666555443 3689999999999999999997753
No 183
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.82 E-value=3e-19 Score=153.30 Aligned_cols=176 Identities=18% Similarity=0.230 Sum_probs=126.1
Q ss_pred eeccccceeccccEEEEEEEcCCCCCeeEEecCCc--cC------------CCCCceEEEEeCCeEEEEEcceecccceE
Q psy12425 297 VPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSR--EI------------TPSARHHIFAEGDTYTLIINSVYGVDADE 362 (591)
Q Consensus 297 ~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~--~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 362 (591)
..+..+.+.+|+.+.|.|.+.+.|.+.+.|+++.. .+ ....++.+...+...+|.|.+++.+|+|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 85 (213)
T 3d9a_L 6 QSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGM 85 (213)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEE
Confidence 33456778999999999999999999999987432 11 11246666667777899999999999999
Q ss_pred EEEEEEeCCccee-eeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeec-cCCC-eEEEeeCCeEeeeccceE
Q psy12425 363 YVCRAVNKGGVKS-TKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKP-KITWYRDNEVIESGGHFH 436 (591)
Q Consensus 363 y~c~a~n~~g~~~-~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~~~~~~~~~~~~ 436 (591)
|+|.|.|..+... ....+.|.. +|.+...+. ......|+.+.|.|.+.| .|.+ .+.|+++|..+.......
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~---~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 162 (213)
T 3d9a_L 86 YFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPP---SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS 162 (213)
T ss_dssp EEEEECSSSSCEECCCEEEEECCCCBCCEEEEECC---CHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEE
T ss_pred EEEeeecCCcceeCCCEEEEEecCCCCceeEeECC---ChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeec
Confidence 9999999877543 334677765 444332111 112236889999999987 5665 899999999876541111
Q ss_pred --EEecCC-----eeEEEEeccCCCcceeEEEEEEcCCCccceEEE
Q psy12425 437 --VETSER-----HAILTIRDASNVDTAPYRVVAENDLGMDSAIVK 475 (591)
Q Consensus 437 --~~~~~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~ 475 (591)
.....+ ...|.|.++..+|.|.|+|.|.|..........
T Consensus 163 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3d9a_L 163 WTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKS 208 (213)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEE
T ss_pred CCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEE
Confidence 111111 358999999999999999999998766543333
No 184
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=4.4e-19 Score=148.33 Aligned_cols=176 Identities=12% Similarity=0.087 Sum_probs=125.5
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+.. .+.+|+.++|.|.+.+. .+.+.|++++..+..... ..........|.|.+++..|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECC-SSCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCccccccc-ccCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 46777776665 68999999999998764 468999998876431000 0001223458999999999999999999987
Q ss_pred Ccce--eeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeE
Q psy12425 371 GGVK--STKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI 445 (591)
Q Consensus 371 ~g~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 445 (591)
.|.. +..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+ +.+.+.|+++|..+.. ..........
T Consensus 80 ~~~~~~s~~~~l~V~~~~~~p~i~~~p----~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~ 150 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTEMYDTPTLSVHP----GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV----QRGYGKVQAE 150 (188)
T ss_dssp TEECCCCCCEEEEEESCSCCCEEEEES----CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE----EEEECSSEEE
T ss_pred CCCCCCCCceEEEecccCCCCeEEECC----CCccccCCEEEEEEEcCC-CCCEEEEEECCccccc----cccCCCceeE
Confidence 6543 4456777764 34443222 234688999999999876 4579999999876654 1223456789
Q ss_pred EEEeccCCCcceeEEEEEEcCCC---ccceEEEEEe
Q psy12425 446 LTIRDASNVDTAPYRVVAENDLG---MDSAIVKIQI 478 (591)
Q Consensus 446 l~i~~~~~~~~g~y~c~a~n~~g---~~~~~~~~~v 478 (591)
|.|.+++.+|+|.|+|.|.|... ..+..+.|.|
T Consensus 151 L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V 186 (188)
T 1oll_A 151 FPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLV 186 (188)
T ss_dssp EEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEE
T ss_pred EEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEe
Confidence 99999999999999999998752 2244555554
No 185
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.81 E-value=6.2e-19 Score=148.67 Aligned_cols=80 Identities=33% Similarity=0.563 Sum_probs=66.1
Q ss_pred eeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eeeeEEEE
Q psy12425 304 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKAELII 382 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~~l~v 382 (591)
+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+..++ +|.|.++..+|+|.|+|.|.|..|.. +..+.|.|
T Consensus 112 ~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 188 (192)
T 2iep_A 112 IIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEV 188 (192)
T ss_dssp EETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEE
Confidence 456777889999999999999999999988877766665444 69999999999999999999999988 45688888
Q ss_pred ecCC
Q psy12425 383 MTAP 386 (591)
Q Consensus 383 ~~~p 386 (591)
..+|
T Consensus 189 ~~pp 192 (192)
T 2iep_A 189 EVFA 192 (192)
T ss_dssp EC--
T ss_pred EeCC
Confidence 7654
No 186
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.81 E-value=1.7e-18 Score=152.95 Aligned_cols=185 Identities=17% Similarity=0.196 Sum_probs=128.6
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccCC----------------CCCceEEEEe--CCeEEEEEcceec
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REIT----------------PSARHHIFAE--GDTYTLIINSVYG 357 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~~----------------~~~~~~~~~~--~~~~~l~i~~~~~ 357 (591)
....+.+|+.+.|.|.+.+.| .+.+.|+++. ..+. ...++.+..+ +...+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 345688999999999999875 6899999852 2110 1245665543 4567999999999
Q ss_pred ccceEEEEEEEeCCc-------ce--eeeeEEEEecCCcc---------cCCCCc---ccceeecCCCeEEEEEeeeccC
Q psy12425 358 VDADEYVCRAVNKGG-------VK--STKAELIIMTAPKF---------NVPPRF---RDTAYFDKGENVVVKIPFTGYP 416 (591)
Q Consensus 358 ~d~g~y~c~a~n~~g-------~~--~~~~~l~v~~~p~~---------~~~~~~---~~~~~~~~g~~~~l~c~~~~~p 416 (591)
+|+|.|+|.|.|..| .. .....|.|...|.. ..++.+ .....+.+|+.+.|.|.+.+.|
T Consensus 88 ~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 167 (257)
T 1f3r_B 88 DDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNI 167 (257)
T ss_dssp TCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCC
T ss_pred ccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcC
Confidence 999999999999864 11 23457777765410 000011 1234578899999999999999
Q ss_pred CCeEEEee--CCeEee------------eccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCC
Q psy12425 417 KPKITWYR--DNEVIE------------SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 417 ~~~v~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
.+.+.|++ ++..+. ...++.+........|+|.++..+|+|.|.|.|.|....-.....|.|...+
T Consensus 168 ~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~~ 247 (257)
T 1f3r_B 168 NNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAAE 247 (257)
T ss_dssp BTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSSC
T ss_pred CCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCCC
Confidence 89999999 554331 0234555444567789999999999999999999975222334456665544
Q ss_pred CC
Q psy12425 483 DP 484 (591)
Q Consensus 483 ~~ 484 (591)
..
T Consensus 248 ~~ 249 (257)
T 1f3r_B 248 QK 249 (257)
T ss_dssp CC
T ss_pred cC
Confidence 33
No 187
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.81 E-value=1.7e-19 Score=159.33 Aligned_cols=171 Identities=18% Similarity=0.208 Sum_probs=120.5
Q ss_pred ccccceeccccEEEEEEEcC---CCCCeeEEecCCccCC------------------------------CCCceEEEEeC
Q psy12425 299 LRNANAIQNHNAQFQCTITG---CPKPTISWLKGSREIT------------------------------PSARHHIFAEG 345 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~---~p~~~v~W~~~~~~~~------------------------------~~~~~~~~~~~ 345 (591)
+..+.+.+|+.+.|.|.+.+ .|.+.+.|++++.... ...+..+.. .
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~ 87 (250)
T 2fbo_J 9 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN-L 87 (250)
T ss_dssp CSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-T
T ss_pred CCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-C
Confidence 34567889999999999987 8889999999764420 011111111 1
Q ss_pred CeEEEEEcceecccceEEEEEEEeCCcce-----eeeeEEEEecCCcccCC-CCcccceeecCCCeEEEEEeeeccCCCe
Q psy12425 346 DTYTLIINSVYGVDADEYVCRAVNKGGVK-----STKAELIIMTAPKFNVP-PRFRDTAYFDKGENVVVKIPFTGYPKPK 419 (591)
Q Consensus 346 ~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-----~~~~~l~v~~~p~~~~~-~~~~~~~~~~~g~~~~l~c~~~~~p~~~ 419 (591)
+..+|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|..++..... ........+.+|+.+.|.|.+.+.|.|.
T Consensus 88 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~ 167 (250)
T 2fbo_J 88 AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANAN 167 (250)
T ss_dssp TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCE
T ss_pred CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCe
Confidence 23479999999999999999999987754 34677888765221111 0112335567899999999999999999
Q ss_pred EEEeeCCeEeeeccce--EEE-------------------ecCCeeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 420 ITWYRDNEVIESGGHF--HVE-------------------TSERHAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 420 v~W~~~~~~~~~~~~~--~~~-------------------~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
+.|++++..+...... ... .......|.|.++..+|+|.|+|.|.|..|..
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 239 (250)
T 2fbo_J 168 VTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGEL 239 (250)
T ss_dssp EEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGG
T ss_pred eEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCcccc
Confidence 9999998876432211 000 00123689999999999999999999966644
No 188
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.81 E-value=2.1e-19 Score=165.02 Aligned_cols=213 Identities=10% Similarity=0.164 Sum_probs=134.8
Q ss_pred eeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCC-eEEeeccccceeccccEEEEEEEcCC-CCC---
Q psy12425 248 QINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAP-EIIVPLRNANAIQNHNAQFQCTITGC-PKP--- 322 (591)
Q Consensus 248 ~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~--- 322 (591)
.|.|......|.|.|+|.|.|..+... ..+..........| .+...+....+.+|+.+.|.|.+.+. |.+
T Consensus 73 ~l~i~~~~~~d~g~Y~C~a~n~~~~~~-----~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~ 147 (323)
T 2wqr_A 73 ELTLSQKHWLSDRTYTCQVTYQGHTFE-----DSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTV 147 (323)
T ss_dssp EEEEEHHHHHTTCCEEEEEEETTEEEE-----EEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCC
T ss_pred EEEEcHHHcCCCCcEEEEEEeCCCCcc-----eeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCce
Confidence 466777777789999999999765321 11111001112233 33445555567889999999999885 555
Q ss_pred eeEEecCC-ccCCCCCceEEEE-eC---CeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEE----ecCCcccCCCC
Q psy12425 323 TISWLKGS-REITPSARHHIFA-EG---DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII----MTAPKFNVPPR 393 (591)
Q Consensus 323 ~v~W~~~~-~~~~~~~~~~~~~-~~---~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v----~~~p~~~~~~~ 393 (591)
.|.|++++ ..+.......... ++ ....|.|.++..+|.|.|+|.|.|..+.......+.+ ..+|.+...+.
T Consensus 148 ~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~ 227 (323)
T 2wqr_A 148 QLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFAT 227 (323)
T ss_dssp EEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEEC
T ss_pred EEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCC
Confidence 89999965 4333221111111 11 1237999999999999999999998643322222221 13444332111
Q ss_pred cccceeecCCCeEEEEEeeecc-CCC-eEEEeeCCeEeeeccceEE----EecC----CeeEEEEeccCCCcceeEEEEE
Q psy12425 394 FRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRDNEVIESGGHFHV----ETSE----RHAILTIRDASNVDTAPYRVVA 463 (591)
Q Consensus 394 ~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~~~~~~~~~~~~~----~~~~----~~~~l~i~~~~~~~~g~y~c~a 463 (591)
. .....|+.+.|.|.+.|. |.+ .|.|+++|..+.... +.. ...+ ..+.|.|..+..+|.|.|+|.|
T Consensus 228 ~---~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a 303 (323)
T 2wqr_A 228 P---EWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDAR-HSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRA 303 (323)
T ss_dssp C---CCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGG-EEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEE
T ss_pred C---hHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCc-eeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEE
Confidence 1 111239999999999984 443 899999999876432 211 1111 1357899999999999999999
Q ss_pred EcCCCc
Q psy12425 464 ENDLGM 469 (591)
Q Consensus 464 ~n~~g~ 469 (591)
.|..+.
T Consensus 304 ~n~~~~ 309 (323)
T 2wqr_A 304 VHEAAS 309 (323)
T ss_dssp ECTTST
T ss_pred EeCCCC
Confidence 999876
No 189
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.81 E-value=3.8e-18 Score=150.07 Aligned_cols=180 Identities=14% Similarity=0.219 Sum_probs=126.5
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCCc--cC-----------------CCCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGSR--EI-----------------TPSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~~--~~-----------------~~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
....+.+|+.+.|.|.+.+.| .+.+.|+++.. .. ....++.+..+ +...+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 446788999999999999987 67899988421 10 12246666553 456789999999
Q ss_pred cccceEEEEEEEeCCcce--eeeeEEEEecCCc---------ccCCCCc---ccceeecCCCeEEEEEeeeccCCCeEEE
Q psy12425 357 GVDADEYVCRAVNKGGVK--STKAELIIMTAPK---------FNVPPRF---RDTAYFDKGENVVVKIPFTGYPKPKITW 422 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~~--~~~~~l~v~~~p~---------~~~~~~~---~~~~~~~~g~~~~l~c~~~~~p~~~v~W 422 (591)
.+|+|.|+|.|.|..+.. .....|.|..++. ...++.+ .....+.+|+.+.|.|.+.+.|.+.+.|
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W 169 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAW 169 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEE
Confidence 999999999999984332 3345777765431 0011111 1234578999999999999999999999
Q ss_pred ee--CCeEee------------eccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc-ceEEEEEec
Q psy12425 423 YR--DNEVIE------------SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQIS 479 (591)
Q Consensus 423 ~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~~v~ 479 (591)
++ ++..+. ...++.+........|+|.++..+|+|.|.|.|.|..+.. .....|.|.
T Consensus 170 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 170 YQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 99 554331 1234555545567789999999999999999999864332 344455554
No 190
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.81 E-value=9.2e-19 Score=151.20 Aligned_cols=177 Identities=13% Similarity=0.202 Sum_probs=125.8
Q ss_pred cccceeccccEEEEEEEcCCCCCe---eEEecCCccCCCCCc------------------eEEE---EeCCeEEEEEcce
Q psy12425 300 RNANAIQNHNAQFQCTITGCPKPT---ISWLKGSREITPSAR------------------HHIF---AEGDTYTLIINSV 355 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p~~~---v~W~~~~~~~~~~~~------------------~~~~---~~~~~~~l~i~~~ 355 (591)
..+.+..|+.+.|.|.+.+.|.+. |.|++++..+..... +.+. ......+|.|.++
T Consensus 7 ~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v 86 (218)
T 4frw_A 7 DVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNA 86 (218)
T ss_dssp SEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSC
T ss_pred CeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeec
Confidence 456688999999999999988764 899997765432111 1110 0112346999999
Q ss_pred ecccceEEEEEEEeCCcceeee-eEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccc
Q psy12425 356 YGVDADEYVCRAVNKGGVKSTK-AELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGH 434 (591)
Q Consensus 356 ~~~d~g~y~c~a~n~~g~~~~~-~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~ 434 (591)
+.+|+|.|.|.+.+..+..... ..+.+..++...... .....+..+..+.+.|.+.+.|.|.|.|++++..+.....
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~ 164 (218)
T 4frw_A 87 VQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNP--GPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRS 164 (218)
T ss_dssp CGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEE--CSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEE
T ss_pred cHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeee--eeeeeeeeccccceeeeccCCcCceEEEEECCcccccCce
Confidence 9999999999999876655433 444444433322211 2334567899999999999999999999999987765443
Q ss_pred eEEEec-CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEe
Q psy12425 435 FHVETS-ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 478 (591)
Q Consensus 435 ~~~~~~-~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v 478 (591)
+..... ...+.|.|..+..+|.|.|+|.|.|..|..+..+.+.+
T Consensus 165 ~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 165 FKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred EecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 322111 12467999999999999999999999999877766655
No 191
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.80 E-value=1.3e-18 Score=150.60 Aligned_cols=179 Identities=13% Similarity=0.143 Sum_probs=124.6
Q ss_pred cccceeccccEEEEEEEcCCCC-----CeeEEecCCccC---------CC------CCceEEEE---eCCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCPK-----PTISWLKGSREI---------TP------SARHHIFA---EGDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p~-----~~v~W~~~~~~~---------~~------~~~~~~~~---~~~~~~l~i~~~~ 356 (591)
..+.+..|+.+.|.|.+.+.|. +.+.|++++..+ .. ..+..+.. ..+..+|.|.+++
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 88 (222)
T 3sbw_C 9 DLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVK 88 (222)
T ss_dssp SEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCC
T ss_pred ccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcc
Confidence 3456789999999999987764 489999864211 00 12333321 1235689999999
Q ss_pred cccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeC-CeEeeeccce
Q psy12425 357 GVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRD-NEVIESGGHF 435 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~-~~~~~~~~~~ 435 (591)
.+|+|.|+|.|.| .|.....+.|.|..++.... ......+..|+.+.|.|.+.|.|.|.+.|+++ +..+......
T Consensus 89 ~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~---~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~ 164 (222)
T 3sbw_C 89 LQDAGVYRCMISY-GGADYKRITVKVNAPYNKIN---QRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTT 164 (222)
T ss_dssp GGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCE---EEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEE
T ss_pred cccCeEEEEEEEe-CCCceeEEEEEEECCCCCCC---ceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccce
Confidence 9999999999999 66667778888886654321 11112467899999999999999999999998 5555433222
Q ss_pred EEEec--CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCC
Q psy12425 436 HVETS--ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 436 ~~~~~--~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
..... +......+..+...|.|.|+|.|.|..|.....+.+.+...|
T Consensus 165 ~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 165 TNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELP 213 (222)
T ss_dssp EECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC-
T ss_pred EEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCc
Confidence 22221 111222233456789999999999999999999999987655
No 192
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.80 E-value=2.4e-18 Score=147.62 Aligned_cols=168 Identities=15% Similarity=0.234 Sum_probs=122.3
Q ss_pred eEEeeccccceeccccEEEEEEEcCCCCCeeEEecCC--ccC------------CCCCceEEEEeCCeEEEEEcceeccc
Q psy12425 294 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGS--REI------------TPSARHHIFAEGDTYTLIINSVYGVD 359 (591)
Q Consensus 294 ~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d 359 (591)
.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++. ... ....++.+...+...+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3nl4_L 3 VMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECAD 82 (213)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred cEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHH
Confidence 3445556677899999999999999999999998842 111 11356677677778899999999999
Q ss_pred ceEEEEEEEeCCcc---eeeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeec-cCCCeEEEeeCCeEeeec
Q psy12425 360 ADEYVCRAVNKGGV---KSTKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKPKITWYRDNEVIESG 432 (591)
Q Consensus 360 ~g~y~c~a~n~~g~---~~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~~v~W~~~~~~~~~~ 432 (591)
+|.|+|.|.|..+. ......+.|.. +|.+...+ ....+..|+.+.|.|.+.+ .|.+.+.|+++|..+..+
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~---~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~ 159 (213)
T 3nl4_L 83 AATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFP---PSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTG 159 (213)
T ss_dssp CEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEEC---CCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSS
T ss_pred CEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeC---CchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCC
Confidence 99999999998773 34455666643 23322211 1123456999999999998 899999999999887543
Q ss_pred cceEE--Ee-cC----CeeEEEEeccCCCcceeEEEEEE
Q psy12425 433 GHFHV--ET-SE----RHAILTIRDASNVDTAPYRVVAE 464 (591)
Q Consensus 433 ~~~~~--~~-~~----~~~~l~i~~~~~~~~g~y~c~a~ 464 (591)
..... .. .+ ..+.|.|..+..+|.|.|+|.|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 160 IENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred eecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 20111 00 01 13579999999999999999999
No 193
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.80 E-value=1.3e-18 Score=148.78 Aligned_cols=170 Identities=15% Similarity=0.230 Sum_probs=121.6
Q ss_pred ccccceeccccEEEEEEEcCCCCCeeEEecCC--ccC------------CCCCceEEEEeCCeEEEEEcceecccceEEE
Q psy12425 299 LRNANAIQNHNAQFQCTITGCPKPTISWLKGS--REI------------TPSARHHIFAEGDTYTLIINSVYGVDADEYV 364 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 364 (591)
+....+.+|+.+.|.|.+.+.|.+.+.|+++. ..+ ....++.+...+...+|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 45667899999999999999988999998842 221 1134666666677789999999999999999
Q ss_pred EEEEeCCccee-eeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEeeCCeEeeeccce--E
Q psy12425 365 CRAVNKGGVKS-TKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRDNEVIESGGHF--H 436 (591)
Q Consensus 365 c~a~n~~g~~~-~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~~~~~~~~~~~--~ 436 (591)
|.|.|..+... ....|.|.. +|.+...+. ...+..|+.+.|.|.+.|. |.+ .+.|+++|..+...... .
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~---~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 163 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPP---STEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVT 163 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECC---CHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEEC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECC---chhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccC
Confidence 99999876542 234666754 343332111 1113478999999999874 544 89999999987644111 1
Q ss_pred EEecCC-----eeEEEEeccCCCcceeEEEEEEcCCCccc
Q psy12425 437 VETSER-----HAILTIRDASNVDTAPYRVVAENDLGMDS 471 (591)
Q Consensus 437 ~~~~~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g~~~ 471 (591)
.....+ ...|.|..+..+|.|.|+|.|.|......
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (210)
T 1lk3_L 164 DQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSP 203 (210)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSC
T ss_pred CccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCe
Confidence 111111 24799999999999999999999876543
No 194
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=2.6e-18 Score=148.82 Aligned_cols=184 Identities=11% Similarity=0.084 Sum_probs=129.9
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+.. .+.+|+.++|.|.+.+ +...+.|+|++..+..... ..........|.|.+++.+|+|.|+|.+.|.
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 56777777665 7899999999999875 3568999998865431000 0001123457999999999999999999887
Q ss_pred Ccce--eeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeE
Q psy12425 371 GGVK--STKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAI 445 (591)
Q Consensus 371 ~g~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 445 (591)
.+.. +....|.|.. +|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+++|..+.. ..........
T Consensus 83 ~~~s~~S~~~~L~V~~~~~~P~i~~~p----~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~----~~~~~~~~~~ 153 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEMYDTPTLSVHP----GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRGYGKVQAE 153 (242)
T ss_dssp TEECCCCCCEEEEEECCSCCCEEEEES----CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE----EEEECSSEEE
T ss_pred CccccCCcceEEEeecccCCCceEccC----CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCc----cccCCCceEE
Confidence 5543 4456777764 34433222 2356899999999998765 469999999976643 1223456789
Q ss_pred EEEeccCCCcceeEEEEEEcCC---CccceEEEEEecCCCCCCC
Q psy12425 446 LTIRDASNVDTAPYRVVAENDL---GMDSAIVKIQISDRPDPPQ 486 (591)
Q Consensus 446 l~i~~~~~~~~g~y~c~a~n~~---g~~~~~~~~~v~~~p~~p~ 486 (591)
|.|.+++..|+|.|+|.|.|.. ...+..+.|.|..++..|.
T Consensus 154 l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P~ 197 (242)
T 1p6f_A 154 FPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTS 197 (242)
T ss_dssp EEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC------
T ss_pred EEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCCCc
Confidence 9999999999999999999874 2346788888887766554
No 195
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.79 E-value=4.1e-18 Score=150.05 Aligned_cols=178 Identities=13% Similarity=0.200 Sum_probs=127.9
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccC-----------------CCCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REI-----------------TPSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
....+.+|+.+.|.|.+.+.| .+.+.|+++. ..+ ....++.+..+ +...+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (256)
T 1nqb_A 8 GAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLT 87 (256)
T ss_dssp CCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCC
Confidence 456688999999999999875 6799999842 211 01245555543 456799999999
Q ss_pred cccceEEEEEEEeCCcc-----eeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCC-----eEEEee--
Q psy12425 357 GVDADEYVCRAVNKGGV-----KSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP-----KITWYR-- 424 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~-----~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~-----~v~W~~-- 424 (591)
.+|+|.|+|.|.|..|. ......|.|..+|.+...| ....+..|+.+.|.|.+.+.|.+ .+.|++
T Consensus 88 ~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p---~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 164 (256)
T 1nqb_A 88 SEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTP---LSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQK 164 (256)
T ss_dssp GGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEEC---SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred hhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecC---cEEEEecCCcEEEEeEecCcccccccceEEEEEEEC
Confidence 99999999999998663 1234567777665544333 33457899999999999998875 999999
Q ss_pred CCeEee------------eccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc-ceEEEEEecC
Q psy12425 425 DNEVIE------------SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQISD 480 (591)
Q Consensus 425 ~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~ 480 (591)
++..+. ...++.+........|+|.++..+|+|.|.|.|.|..+.. .....|.|..
T Consensus 165 ~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 165 PGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp TTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 555331 1234555445567889999999999999999999864322 3344566643
No 196
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.79 E-value=6.5e-19 Score=130.23 Aligned_cols=88 Identities=19% Similarity=0.352 Sum_probs=81.9
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+.|.|.|.|.|+|||+.|..+.++++...+...+|.|.+++.+|+|.|+|.|.|..|..+.++
T Consensus 20 p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 99 (107)
T 3knb_B 20 PRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAA 99 (107)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEE
Confidence 67899999999999999999999999999999999999898888888888999999999999999999999999999999
Q ss_pred EEEEecCC
Q psy12425 82 TINITGLP 89 (591)
Q Consensus 82 ~l~v~~~p 89 (591)
.|.|..+|
T Consensus 100 ~l~V~~pP 107 (107)
T 3knb_B 100 AVTVLEPP 107 (107)
T ss_dssp EEEEEC--
T ss_pred EEEEEcCC
Confidence 99998765
No 197
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.79 E-value=2.2e-18 Score=150.16 Aligned_cols=84 Identities=19% Similarity=0.396 Sum_probs=67.8
Q ss_pred ceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCcee-EEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 3 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK-FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
..+.|.+|+++.|.|.+.|.|.+.+.|+|+|..+....++. ........+|.|.+++.+|+|.|+|.+.|..|.....+
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 57789999999999999999999999999999987664432 12333445899999999999999999999877766555
Q ss_pred EEEEe
Q psy12425 82 TINIT 86 (591)
Q Consensus 82 ~l~v~ 86 (591)
.|.|.
T Consensus 107 ~l~V~ 111 (231)
T 3ojm_B 107 HLDVV 111 (231)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55553
No 198
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.79 E-value=5.1e-19 Score=154.16 Aligned_cols=176 Identities=20% Similarity=0.333 Sum_probs=124.7
Q ss_pred cccceeccccEEEEEEEcCCCC-CeeEEecCCccCC---------C----CCceE----------EEEeCCeEEEEEcce
Q psy12425 300 RNANAIQNHNAQFQCTITGCPK-PTISWLKGSREIT---------P----SARHH----------IFAEGDTYTLIINSV 355 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p~-~~v~W~~~~~~~~---------~----~~~~~----------~~~~~~~~~l~i~~~ 355 (591)
....+.+|+.+.|.|.+.+.+. +.+.|++++.... . ..+.. +..++ .|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~---~L~i~~v 84 (231)
T 2pet_A 8 PLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG---RLVLAEA 84 (231)
T ss_dssp SEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC---CEEESSC
T ss_pred CcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc---eEEEccc
Confidence 4566889999999999999985 8999998654422 0 01111 22222 4999999
Q ss_pred ecccceEEEEEEEeCC-cceeeeeEEEEecCCcccCCCCcccceeecCCCeE-EEEEee-eccCCCeEEEeeCCeEeeec
Q psy12425 356 YGVDADEYVCRAVNKG-GVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV-VVKIPF-TGYPKPKITWYRDNEVIESG 432 (591)
Q Consensus 356 ~~~d~g~y~c~a~n~~-g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~-~l~c~~-~~~p~~~v~W~~~~~~~~~~ 432 (591)
+.+|+|.|+|.|.|.. |.....+.|.|..+|..+.-........+..|+.+ .|.|.+ .+.|.|.+.|++++..+...
T Consensus 85 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~ 164 (231)
T 2pet_A 85 QVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVP 164 (231)
T ss_dssp CGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCC
T ss_pred CcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccc
Confidence 9999999999999987 77788889999887654221111123345678887 999999 89999999999999988755
Q ss_pred c----ceEEEec----CC-----eeEEEEeccCCCcceeEEEEEEcC-----CCc-cceEEEEEe
Q psy12425 433 G----HFHVETS----ER-----HAILTIRDASNVDTAPYRVVAEND-----LGM-DSAIVKIQI 478 (591)
Q Consensus 433 ~----~~~~~~~----~~-----~~~l~i~~~~~~~~g~y~c~a~n~-----~g~-~~~~~~~~v 478 (591)
. ++.+... .. ...|.|.....+|.|.|+|.|.|. .|. .+..+.|.|
T Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 165 VEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp SSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred cccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 4 3433321 11 266888766666799999999994 444 444444443
No 199
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.79 E-value=1.7e-19 Score=150.30 Aligned_cols=146 Identities=12% Similarity=0.220 Sum_probs=109.5
Q ss_pred eeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcc-eecccceEEEEEEEeCCcceeeeeEEEE
Q psy12425 304 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINS-VYGVDADEYVCRAVNKGGVKSTKAELII 382 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~c~a~n~~g~~~~~~~l~v 382 (591)
...|+.+.|.|.+.+ +. .+.|++++..+.... ..+|.|.+ +..+|+|.|+|.|.|..|.......+.|
T Consensus 11 ~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~---------~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v 79 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-DE-NLKWEKNGQELPQKH---------DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARV 79 (186)
T ss_dssp EEETTEEEEECSSCC-CT-TCEEEETTEEECSCC---------CSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCC
T ss_pred EeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCC---------CCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 467999999999988 44 499999998876531 12699999 9999999999999999888555444444
Q ss_pred ecCCcccC------------CC-----Cc-----ccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEec
Q psy12425 383 MTAPKFNV------------PP-----RF-----RDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETS 440 (591)
Q Consensus 383 ~~~p~~~~------------~~-----~~-----~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~ 440 (591)
...+.... ++ .. .....+..|+.+.|.|.+ |.|.+.|+++|..+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~------- 149 (186)
T 1jbj_A 80 GSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLN------- 149 (186)
T ss_dssp CSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSS-------
T ss_pred ecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccC-------
Confidence 33211110 00 00 001234589999999998 889999999999875322
Q ss_pred CCeeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 441 ERHAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 441 ~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
.....|.|.++..+|+|.|+|.|.|..|..
T Consensus 150 ~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 150 ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 256789999999999999999999999875
No 200
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.79 E-value=2.6e-18 Score=147.53 Aligned_cols=80 Identities=26% Similarity=0.442 Sum_probs=59.1
Q ss_pred eeccccEEEEEE-EcCCCCCeeEEecCCc-cCCCCCce-------EEEEeCCeEEEEEcceecccceEEEEEEEeCCcce
Q psy12425 304 AIQNHNAQFQCT-ITGCPKPTISWLKGSR-EITPSARH-------HIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK 374 (591)
Q Consensus 304 ~~~g~~~~l~c~-~~~~p~~~v~W~~~~~-~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~ 374 (591)
+.+|+.+.|.|. +.+.|.+.+.|++++. .+...... ..........|.|.++..+|.|.|+|.|.|..|..
T Consensus 116 ~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 116 VTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp EETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCC
T ss_pred cCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCc
Confidence 456778899999 6889999999999998 77654331 22223334479999999999999999999999988
Q ss_pred --eeeeEEEEe
Q psy12425 375 --STKAELIIM 383 (591)
Q Consensus 375 --~~~~~l~v~ 383 (591)
+..+.|.|.
T Consensus 196 ~~s~~~~l~V~ 206 (212)
T 1f97_A 196 MRSEAAHMDAV 206 (212)
T ss_dssp EECCCEEEEEE
T ss_pred cccceEEEEEE
Confidence 444555554
No 201
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.79 E-value=1.1e-17 Score=149.26 Aligned_cols=191 Identities=15% Similarity=0.230 Sum_probs=130.0
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCcc-----C---------CCCCceEEEEeCCeEEEEEcceec
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSRE-----I---------TPSARHHIFAEGDTYTLIINSVYG 357 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~-----~---------~~~~~~~~~~~~~~~~l~i~~~~~ 357 (591)
.+.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++.. + ....++.+..++...+|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 34555666777889999999999999999999999985421 1 113466666667778999999999
Q ss_pred ccceEEEEEEEeCCcce-eeeeEEEEecCCc-------------ccCCCCcccceeecCCCeEEEEEeeeccC--CCeEE
Q psy12425 358 VDADEYVCRAVNKGGVK-STKAELIIMTAPK-------------FNVPPRFRDTAYFDKGENVVVKIPFTGYP--KPKIT 421 (591)
Q Consensus 358 ~d~g~y~c~a~n~~g~~-~~~~~l~v~~~p~-------------~~~~~~~~~~~~~~~g~~~~l~c~~~~~p--~~~v~ 421 (591)
+|+|.|.|.|.|..+.. .....|.|..+|. +... ......+.+|+.+.|.|.+.+.+ .+.+.
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~--~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~ 169 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLV--ESGGGLVQPGGSLRLSCAASGFTISDYWIH 169 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEE--EECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEE--CCCceEecCCCeEEEEEEecCccCCCCEEE
Confidence 99999999999976642 3345677665532 1110 01345678999999999999877 58999
Q ss_pred EeeCC--eEe---e--------------eccceEEEec--CCeeEEEEeccCCCcceeEEEEEEcCC---Ccc--ceEEE
Q psy12425 422 WYRDN--EVI---E--------------SGGHFHVETS--ERHAILTIRDASNVDTAPYRVVAENDL---GMD--SAIVK 475 (591)
Q Consensus 422 W~~~~--~~~---~--------------~~~~~~~~~~--~~~~~l~i~~~~~~~~g~y~c~a~n~~---g~~--~~~~~ 475 (591)
|++++ ... . ...++.+... .....|.|.++..+|+|.|.|.|.|.. +.. .....
T Consensus 170 W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~ 249 (276)
T 3auv_A 170 WVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTL 249 (276)
T ss_dssp EEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEE
T ss_pred EEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEE
Confidence 99963 211 0 1234444432 345689999999999999999999984 221 23456
Q ss_pred EEecCCCCC
Q psy12425 476 IQISDRPDP 484 (591)
Q Consensus 476 ~~v~~~p~~ 484 (591)
|.|...|.+
T Consensus 250 l~V~~~~~~ 258 (276)
T 3auv_A 250 VTVSSASAA 258 (276)
T ss_dssp EEEC-----
T ss_pred EEEcccccc
Confidence 666554433
No 202
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.78 E-value=5.3e-18 Score=145.48 Aligned_cols=176 Identities=12% Similarity=0.147 Sum_probs=123.7
Q ss_pred eEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCc--c------------CCCCCceEEEEeCCeEEEEEcceeccc
Q psy12425 294 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSR--E------------ITPSARHHIFAEGDTYTLIINSVYGVD 359 (591)
Q Consensus 294 ~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~--~------------~~~~~~~~~~~~~~~~~l~i~~~~~~d 359 (591)
.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++... . .....++.+...+...+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCccc
Confidence 34454566778999999999999999999999988321 1 012346666666677899999999999
Q ss_pred ceEEEEEEEeCCcce-eeeeEEEE---ecCCcccCCCCcccceeecCCCeEEEEEeeeccCC--CeEEEeeCCeEeeecc
Q psy12425 360 ADEYVCRAVNKGGVK-STKAELII---MTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK--PKITWYRDNEVIESGG 433 (591)
Q Consensus 360 ~g~y~c~a~n~~g~~-~~~~~l~v---~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~--~~v~W~~~~~~~~~~~ 433 (591)
+|.|+|.|.|..+.. .....|.| ..+|.+...+ ....+..|+.+.|.|.+.+.++ +.+.|+++|..+..+.
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~---~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 159 (213)
T 3r06_A 83 IGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFP---PSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGV 159 (213)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEEC---CCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred CEEEEEecccCCceEEcCCceEEEeccCCCceeeeeC---CCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCce
Confidence 999999999876533 34456776 3344443222 1222346888999999998654 3899999999886431
Q ss_pred --ceEEEecCC-----eeEEEEeccCCCcceeEEEEEEcCCCccce
Q psy12425 434 --HFHVETSER-----HAILTIRDASNVDTAPYRVVAENDLGMDSA 472 (591)
Q Consensus 434 --~~~~~~~~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~ 472 (591)
........+ ...|.|.....+|.|.|+|.|.|.......
T Consensus 160 ~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~~ 205 (213)
T 3r06_A 160 LQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAAI 205 (213)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCE
T ss_pred EeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcce
Confidence 111111111 346778888888999999999998655433
No 203
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.78 E-value=6.7e-18 Score=144.02 Aligned_cols=188 Identities=22% Similarity=0.343 Sum_probs=142.8
Q ss_pred EEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEee----cCcceEEEcCCcCCcE
Q psy12425 83 INITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT----CHDTTFIVQGLTEGQE 158 (591)
Q Consensus 83 l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~----~~~~~~~i~~l~~~~~ 158 (591)
+.....|.+|.. +.+..... ++.|+|.+|...++.++..|.|+++......|...... .....+.+.+|.+++.
T Consensus 3 l~~~~~P~~P~~-~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 80 (209)
T 2vkw_A 3 LAQADTPSSPSI-DQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETT 80 (209)
T ss_dssp --CCCCCCCCEE-EEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCE
T ss_pred ccccCCCcCCcc-cEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCe
Confidence 344566777655 45555555 79999999977778789999999999888888776542 2356899999999999
Q ss_pred EEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEE
Q psy12425 159 YLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQR 238 (591)
Q Consensus 159 y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 238 (591)
|.|+|.|.|..|.+..+......+ .....|.+|..+.+.....+++.|+|.+| .+.+..+.+|.|+++. ....|..
T Consensus 81 Y~~~V~A~n~~G~~~~s~~~~~~T--~~~~~P~~P~~~~~~~~~~~sv~l~W~~p-~~~~~~i~~Y~v~~~~-~~~~~~~ 156 (209)
T 2vkw_A 81 YAVRLAALNGKGLGEISAASEFKT--QPVREPSAPKLEGQMGEDGNSIKVNLIKQ-DDGGSPIRHYLVRYRA-LSSEWKP 156 (209)
T ss_dssp EEEEEEEEETTEECCCCCCEEEEC--CCSCSCCCCEEEEEECTTSSCEEEEEECC-CCTTSCCCEEEEEEEE-TTSCCCC
T ss_pred EEEEEEEEcCCcccCCcccccccc--cCCCCCCCCcccccccccCCeEEEEEECc-ccCCCCCceEEEEEEC-CCCCCce
Confidence 999999999999887765433222 12225666666666677889999999998 4445689999999998 5556655
Q ss_pred EEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCC
Q psy12425 239 VNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 276 (591)
Q Consensus 239 ~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s 276 (591)
..........+.|.+|.++..|.|+++|.|..|.+.++
T Consensus 157 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S 194 (209)
T 2vkw_A 157 EIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAA 194 (209)
T ss_dssp CEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred eeecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcc
Confidence 44444455789999999999999999999999987654
No 204
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.78 E-value=8.8e-18 Score=142.19 Aligned_cols=167 Identities=13% Similarity=0.087 Sum_probs=117.3
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceE-EEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH-IFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
.+|.+...+. ..+.+|+.+.|.|.+.+ +.+.+.|+|++..+....... .........|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 4677766654 66889999999999974 778999999887653211110 01111234799999999999999999987
Q ss_pred CCc-----ceeeeeEEEEecC---CcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEec-
Q psy12425 370 KGG-----VKSTKAELIIMTA---PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETS- 440 (591)
Q Consensus 370 ~~g-----~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~- 440 (591)
... ..+....|.|... |.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+++|..+...........
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~----~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~ 159 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG----PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNG 159 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECSSCCCEEEEESC----SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETT
T ss_pred CCCCccccCCCCCEEEEeeccCCCCceecCCC----CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCC
Confidence 532 2244567777653 33332221 35689999999999986 5689999999987654322222222
Q ss_pred CCeeEEEEeccCCCcceeEEEEEEcC
Q psy12425 441 ERHAILTIRDASNVDTAPYRVVAEND 466 (591)
Q Consensus 441 ~~~~~l~i~~~~~~~~g~y~c~a~n~ 466 (591)
.....|.|.+++ |+|.|+|.|.+.
T Consensus 160 ~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 160 TFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EEEEEEEEEECC--SCEEEEEEEEET
T ss_pred ceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 236789999998 999999999876
No 205
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.78 E-value=2.4e-18 Score=157.92 Aligned_cols=264 Identities=11% Similarity=0.139 Sum_probs=152.8
Q ss_pred CCCeEEeeccccceecc--ccEEEEEEEcCC-C-CCeeEEecCCccCCCCCce-EEEEeCCe----EEEEEcceecccce
Q psy12425 291 KAPEIIVPLRNANAIQN--HNAQFQCTITGC-P-KPTISWLKGSREITPSARH-HIFAEGDT----YTLIINSVYGVDAD 361 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g--~~~~l~c~~~~~-p-~~~v~W~~~~~~~~~~~~~-~~~~~~~~----~~l~i~~~~~~d~g 361 (591)
.+|.+...+.......| +.+.|.|.+.+. | .+.|.|+++|..+...... .....++. ..|.|.+...+|.|
T Consensus 6 ~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g 85 (323)
T 2wqr_A 6 TPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDR 85 (323)
T ss_dssp CCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTC
T ss_pred CCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCC
Confidence 34555443333222334 699999999885 4 4799999999887654321 11222332 25777777778999
Q ss_pred EEEEEEEeCCcceeeeeEEEE---ecCCcc-cCCCCcccceeecCCCeEEEEEeeecc-CCC---eEEEeeCC-eEeeec
Q psy12425 362 EYVCRAVNKGGVKSTKAELII---MTAPKF-NVPPRFRDTAYFDKGENVVVKIPFTGY-PKP---KITWYRDN-EVIESG 432 (591)
Q Consensus 362 ~y~c~a~n~~g~~~~~~~l~v---~~~p~~-~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~---~v~W~~~~-~~~~~~ 432 (591)
.|+|.|.|..+.....+.+.+ ...|.+ ..+| ....+..|+.+.|.|.+.|. |.+ .|.|++++ ..+...
T Consensus 86 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p---~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~ 162 (323)
T 2wqr_A 86 TYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRP---SPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHS 162 (323)
T ss_dssp CEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCC---CHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCC
T ss_pred cEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCC---CHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccc
Confidence 999999998775543322111 012222 1122 12236789999999999886 556 89999975 443322
Q ss_pred cceEEEecC----CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEec-CCCCCCCCCeee-----eecCCeeEEEe
Q psy12425 433 GHFHVETSE----RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS-DRPDPPQFPTVE-----DIGHDSLALVW 502 (591)
Q Consensus 433 ~~~~~~~~~----~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~-~~p~~p~~~~~~-----~~~~~~v~l~W 502 (591)
........+ ....|.|.++..+|.|.|+|.|.|..+.......+... ....+|. +.+. ...+..++|.|
T Consensus 163 ~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~-v~~~~~~~~~~~g~~~~l~C 241 (323)
T 2wqr_A 163 TRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPE-VYAFATPEWPGSRDKRTLAC 241 (323)
T ss_dssp CCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCE-EEEEECCCCTTCTTEEEEEE
T ss_pred cCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCE-EEEeCCChHHhcCCcEEEEE
Confidence 111111111 24579999999999999999999987544334433322 1112221 1111 11267888888
Q ss_pred eccccCCCcceeeEEEEeeeCC----CCceEE-----ece---eeeeEEEEcCcccCceEEEEEEEEcCCcC
Q psy12425 503 RAPIWDGGSNITNYIVEKREHP----MSSWIR-----VGN---TRFTTMAITGLSPGHQYEFRVYAENVYGR 562 (591)
Q Consensus 503 ~~p~~~~~~~~~~y~v~~~~~~----~~~~~~-----~~~---~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~ 562 (591)
........ . . .+.|...+ ...... ..+ .....+.|......+.+.|+|.|.|..+.
T Consensus 242 ~~~g~~p~-~-~--~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 242 LIQNFMPE-D-I--SVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEEEEBSS-C-C--EEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred EeeeeeCC-C-c--EEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 75321111 1 1 22222221 111111 001 12346888888888889999999999875
No 206
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.78 E-value=6e-18 Score=149.18 Aligned_cols=185 Identities=16% Similarity=0.220 Sum_probs=127.8
Q ss_pred eccccceeccccEEEEEEEcCCC--CCeeEEecC--CccC-----------------CCCCceEEEEeC--CeEEEEEcc
Q psy12425 298 PLRNANAIQNHNAQFQCTITGCP--KPTISWLKG--SREI-----------------TPSARHHIFAEG--DTYTLIINS 354 (591)
Q Consensus 298 ~~~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~--~~~~-----------------~~~~~~~~~~~~--~~~~l~i~~ 354 (591)
.+..+.+.+|+.+.|.|.+.+.+ .+.+.|++. +..+ ....++.+..++ ...+|.|.+
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 86 (253)
T 3uzq_A 7 QSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSS 86 (253)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCC
Confidence 34566788999999999998854 778999882 1111 012345555433 366899999
Q ss_pred eecccceEEEEEEEeCCcce-eeeeEEEEecC---------------CcccCCCCcccceeecCCCeEEEEEeeeccCCC
Q psy12425 355 VYGVDADEYVCRAVNKGGVK-STKAELIIMTA---------------PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP 418 (591)
Q Consensus 355 ~~~~d~g~y~c~a~n~~g~~-~~~~~l~v~~~---------------p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~ 418 (591)
++.+|+|.|+|.|.|..+.. .....|.|... |.+...+ ....+.+|+.+.|.|.+.+.+.+
T Consensus 87 v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p---~~~~v~~G~~v~L~C~~~~~~~~ 163 (253)
T 3uzq_A 87 LTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTP---ASLAVSLGQRATISCRASENVDR 163 (253)
T ss_dssp CCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEEC---SEEEECTTSCEEEEEEESSCCEE
T ss_pred CCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcC---CeEEEeCCCCEEEEEEecCcccc
Confidence 99999999999999966554 34566777642 2222212 23567899999999999998887
Q ss_pred ----eEEEeeC--CeEee------------eccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc-ceEEEEEec
Q psy12425 419 ----KITWYRD--NEVIE------------SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQIS 479 (591)
Q Consensus 419 ----~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~~v~ 479 (591)
.+.|+++ +.... ...++..........|+|.+++.+|+|.|.|.|.|..+.. ..-..|.|.
T Consensus 164 ~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 164 YGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp TTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred CCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEc
Confidence 9999984 22111 1134555555567789999999999999999999976544 445567776
Q ss_pred CCCCCC
Q psy12425 480 DRPDPP 485 (591)
Q Consensus 480 ~~p~~p 485 (591)
..+.+|
T Consensus 244 ~~~~~~ 249 (253)
T 3uzq_A 244 RPLEHH 249 (253)
T ss_dssp CC----
T ss_pred CCCCCc
Confidence 655443
No 207
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.78 E-value=5.9e-18 Score=142.28 Aligned_cols=78 Identities=28% Similarity=0.582 Sum_probs=66.3
Q ss_pred eeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEe
Q psy12425 304 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 383 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 383 (591)
+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+ .+|.|.++..+|+|.|+|.|.|..|.......|.|.
T Consensus 110 ~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 110 AERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp TTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTT--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCC--CEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 456778899999999999999999999988877766654333 379999999999999999999999999888888775
No 208
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.78 E-value=1.6e-18 Score=149.96 Aligned_cols=177 Identities=16% Similarity=0.289 Sum_probs=124.2
Q ss_pred ccceeccccEEEEEEEcCCCC-----CeeEEecCCccC-------------CCCCceEEEE---eCCeEEEEEcceeccc
Q psy12425 301 NANAIQNHNAQFQCTITGCPK-----PTISWLKGSREI-------------TPSARHHIFA---EGDTYTLIINSVYGVD 359 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p~-----~~v~W~~~~~~~-------------~~~~~~~~~~---~~~~~~l~i~~~~~~d 359 (591)
.+.+.+|+.+.|.|.+.+.+. +.+.|++++... ....+..+.. ..+..+|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 456789999999999988764 789999976443 1112222221 0114479999999999
Q ss_pred ceEEEEEEEeCCcceeeeeEEEEecC---CcccCCCCcccceeecCCCeEEEEEee-eccCCCeEEEee-CCeEeeeccc
Q psy12425 360 ADEYVCRAVNKGGVKSTKAELIIMTA---PKFNVPPRFRDTAYFDKGENVVVKIPF-TGYPKPKITWYR-DNEVIESGGH 434 (591)
Q Consensus 360 ~g~y~c~a~n~~g~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~v~W~~-~~~~~~~~~~ 434 (591)
+|.|+|.+.|. +.......|.|..+ |.+...+ ...+..|+.+.|.|.+ .+.|.+.+.|++ ++..+.....
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~----~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~ 158 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP----NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVT 158 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC---------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEE
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC----CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcc
Confidence 99999999986 44455666666654 3333322 2245689999999999 899999999999 4554433222
Q ss_pred eEEEec--CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCC
Q psy12425 435 FHVETS--ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRP 482 (591)
Q Consensus 435 ~~~~~~--~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p 482 (591)
...... +....|.|.++..+|.|.|+|.|.|..|.....+.+.|..+|
T Consensus 159 ~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 159 TSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQP 208 (222)
T ss_dssp EEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC--
T ss_pred eeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCc
Confidence 222222 233568899999999999999999999999999999998877
No 209
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.78 E-value=9.1e-18 Score=144.27 Aligned_cols=78 Identities=22% Similarity=0.385 Sum_probs=62.6
Q ss_pred ccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eeeeE
Q psy12425 301 NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKAE 379 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~~ 379 (591)
...+..|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.++...|.|.|+|.|.|..|.. +..+.
T Consensus 127 ~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~ 197 (218)
T 3k0w_A 127 SQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVE 197 (218)
T ss_dssp CEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEE
T ss_pred ceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCC---------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEE
Confidence 34567889999999999999999999999888765432 279999999999999999999988874 55677
Q ss_pred EEEecCCc
Q psy12425 380 LIIMTAPK 387 (591)
Q Consensus 380 l~v~~~p~ 387 (591)
|.|...+.
T Consensus 198 l~V~~~~~ 205 (218)
T 3k0w_A 198 IIIDELNN 205 (218)
T ss_dssp EEECC---
T ss_pred EEEeCCcc
Confidence 77765433
No 210
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.78 E-value=2.7e-18 Score=147.41 Aligned_cols=86 Identities=29% Similarity=0.504 Sum_probs=64.7
Q ss_pred eeccccEEEEEEE-cCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceee-eeEEE
Q psy12425 304 AIQNHNAQFQCTI-TGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKST-KAELI 381 (591)
Q Consensus 304 ~~~g~~~~l~c~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~-~~~l~ 381 (591)
+..|+.+.|.|.+ .+.|.+.+.|++++..+..........++ .|.|.++..+|.|.|+|.|.|..|.... .+.|.
T Consensus 123 ~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~ 199 (212)
T 2v9r_A 123 VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGG---KLMITYTRKSDAGKYVCVGTNMVGERESEVAELT 199 (212)
T ss_dssp EETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred ecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCC---eEEEeeCCHhhCeeEEEEEecccCceecceEEEE
Confidence 4567788999998 88899999999999888765544333333 7999999999999999999999998755 48999
Q ss_pred EecCCcccCCC
Q psy12425 382 IMTAPKFNVPP 392 (591)
Q Consensus 382 v~~~p~~~~~~ 392 (591)
|..+|.+...|
T Consensus 200 V~~~P~~~~~P 210 (212)
T 2v9r_A 200 VLERPSFVKAA 210 (212)
T ss_dssp EEC--------
T ss_pred EEeCchHhhhc
Confidence 99988776544
No 211
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.78 E-value=7e-18 Score=156.22 Aligned_cols=171 Identities=12% Similarity=0.173 Sum_probs=118.3
Q ss_pred cccceeccccEEEEEEEcCC--CCCeeEEecC--CccC-----------------CCCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGC--PKPTISWLKG--SREI-----------------TPSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~--~~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
..+.+.+|+.+.|.|.+.+. +.+.+.|+++ +..+ ....++.+..+ +...+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (344)
T 1za6_B 8 GAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLR 87 (344)
T ss_dssp CCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCC
Confidence 44568899999999999886 3678999986 3221 11345665544 356789999999
Q ss_pred cccceEEEEEEEeCCcceeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeCCeEee
Q psy12425 357 GVDADEYVCRAVNKGGVKSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRDNEVIE 430 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~~ 430 (591)
.+|+|.|+|.|.|..+.......|.|.. +|.+...+ ....+..|+.+.|.|.+.|. |. +.+.|++++..+.
T Consensus 88 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~---~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~ 164 (344)
T 1za6_B 88 SEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLA---PSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG 164 (344)
T ss_dssp GGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEEC---CSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTT
T ss_pred cccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEcc---ccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCc
Confidence 9999999999999665555567788773 23322111 11234689999999999987 64 7999999987542
Q ss_pred eccceEEEec-C---CeeEEEEeccCCCcceeEEEEEEcCCCccceEE
Q psy12425 431 SGGHFHVETS-E---RHAILTIRDASNVDTAPYRVVAENDLGMDSAIV 474 (591)
Q Consensus 431 ~~~~~~~~~~-~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~ 474 (591)
.......... + ....|.|..+..+| |.|+|.|.|..|......
T Consensus 165 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~ 211 (344)
T 1za6_B 165 VHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 211 (344)
T ss_dssp EEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEE
T ss_pred eeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceE
Confidence 1100001111 1 13478999988878 999999999988654333
No 212
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.78 E-value=1.6e-16 Score=143.31 Aligned_cols=212 Identities=19% Similarity=0.230 Sum_probs=162.0
Q ss_pred EeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEEEEEec--CCCCCCCCcceEEecCceEEEEecCCCCCCCcceee
Q psy12425 46 VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG--LPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTH 123 (591)
Q Consensus 46 ~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~l~v~~--~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~ 123 (591)
...+...+.|.+|.+...|.|++.|.|..|...... ..+.. .|.+|.. +.+......++.|+|.+|. ..+..
T Consensus 69 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~-~~~~t~~~~~~P~~-l~~~~~~~~sv~l~W~~p~----~~~~~ 142 (290)
T 3r8q_A 69 LAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQ-GVVTTLENVSPPRR-ARVTDATETTITISWRTKT----ETITG 142 (290)
T ss_dssp ECTTCCEEEECSCCSSCEEEEEEEEEETTEECCCEE-EEEECCCCCCCCEE-EEEEEECSSCEEEEEECCS----CCCCE
T ss_pred cCCCccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcc-eeEecCCCCCCCce-eEEEEcCCCeEEEEEeCCC----CcccE
Confidence 344556899999999999999999999988775442 23333 3434433 5666778899999999874 36789
Q ss_pred EEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecC
Q psy12425 124 YVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGG 203 (591)
Q Consensus 124 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 203 (591)
|.+.+.......+...........+.+.+|.+++.|.|+|.|.|..|.+..... .... .|.+|..+.+.....
T Consensus 143 Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~----~~~t---~p~~P~~l~~~~~~~ 215 (290)
T 3r8q_A 143 FQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVI----DAST---AIDAPSNLRFLATTP 215 (290)
T ss_dssp EEEEEEESSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEE----EEEC---CCCCCEEEEEEEEET
T ss_pred EEEEEEECCCCcceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCEEE----EecC---CCCCCCccEEEeeCC
Confidence 999998877666555555667788999999999999999999999887665321 1111 466677788888889
Q ss_pred CeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCC
Q psy12425 204 DFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSL 274 (591)
Q Consensus 204 ~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~ 274 (591)
+++.|+|.++. ..+.+|.+.++..+...|............+.+.+|.++..|.|+++|.+..|.+.
T Consensus 216 ~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~ 282 (290)
T 3r8q_A 216 NSLLVSWQPPR----ARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSE 282 (290)
T ss_dssp TEEEEEEECCS----SCCCEEEEEEECTTSCCEECSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred CEEEEEEeCCC----CcccEEEEEEEeCCCCcceeEeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCC
Confidence 99999999863 36889999999877665543322234567899999999999999999999988764
No 213
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.78 E-value=1.7e-18 Score=148.34 Aligned_cols=169 Identities=14% Similarity=0.239 Sum_probs=121.7
Q ss_pred ccceeccccEEEEEEEcCCCCCeeEEecC--CccCC------------CCCceEEEEeCCeEEEEEcceecccceEEEEE
Q psy12425 301 NANAIQNHNAQFQCTITGCPKPTISWLKG--SREIT------------PSARHHIFAEGDTYTLIINSVYGVDADEYVCR 366 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p~~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~ 366 (591)
.+.+.+|+.+.|.|.+. +.+.+.|+++ +.... ...++.+...+...+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 45678999999999998 8889999984 22211 23466666677778999999999999999999
Q ss_pred EEeCCc--ceeeeeEEEEe----cCCcccCCCCcccceeecCCCeEEEEEeeecc--CCCeEEEeeCCeEeeeccceE--
Q psy12425 367 AVNKGG--VKSTKAELIIM----TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY--PKPKITWYRDNEVIESGGHFH-- 436 (591)
Q Consensus 367 a~n~~g--~~~~~~~l~v~----~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~~~~~~~~~~~~-- 436 (591)
|.|..| .......|.|. .+|.+...+. ...+..|+.+.|.|.+.|. |.+.+.|+++|..+..+....
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~---~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 163 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPP---SSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTP 163 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEECC---CHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCC
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEecCC---chhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCc
Confidence 999887 34556777777 3444433221 1122369999999999985 357999999999875421111
Q ss_pred EEecCC----eeEEEEeccCCCcceeEEEEEEcCCCccceEE
Q psy12425 437 VETSER----HAILTIRDASNVDTAPYRVVAENDLGMDSAIV 474 (591)
Q Consensus 437 ~~~~~~----~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~ 474 (591)
....+. ...|.|..+..+|.|.|+|.|.|..|.....+
T Consensus 164 ~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 164 SKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp EECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred eECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 111111 25688999988999999999999987554433
No 214
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.78 E-value=2.8e-17 Score=145.33 Aligned_cols=189 Identities=16% Similarity=0.226 Sum_probs=126.8
Q ss_pred CeEEeeccccceeccccEEEEEEEcCC--CCCeeEEecCCc--c---C-------------CCCCceEEEEe--CCeEEE
Q psy12425 293 PEIIVPLRNANAIQNHNAQFQCTITGC--PKPTISWLKGSR--E---I-------------TPSARHHIFAE--GDTYTL 350 (591)
Q Consensus 293 p~~~~~~~~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~~~--~---~-------------~~~~~~~~~~~--~~~~~l 350 (591)
+..+..+....+.+|+.+.|.|.+.+. +.+.+.|++... . + ....++.+..+ +...+|
T Consensus 9 ~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 88 (257)
T 3gkz_A 9 EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYL 88 (257)
T ss_dssp CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEE
T ss_pred cEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEE
Confidence 344445566778999999999999884 578999988321 1 0 11234555533 346689
Q ss_pred EEcceecccceEEEEEEEeCC----cceeeeeEEEEecC--------------CcccCCCCcccceeecCCCeEEEEEee
Q psy12425 351 IINSVYGVDADEYVCRAVNKG----GVKSTKAELIIMTA--------------PKFNVPPRFRDTAYFDKGENVVVKIPF 412 (591)
Q Consensus 351 ~i~~~~~~d~g~y~c~a~n~~----g~~~~~~~l~v~~~--------------p~~~~~~~~~~~~~~~~g~~~~l~c~~ 412 (591)
.|.+++.+|+|.|+|.|.|.. +.......|.|..+ +.+...+ ....+.+|+.+.|.|.+
T Consensus 89 ~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p---~~~~v~~G~~v~L~C~~ 165 (257)
T 3gkz_A 89 QLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSP---AIMSASPGEKVTLTCSA 165 (257)
T ss_dssp EECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSC---SEEEECTTCCEEEEEEE
T ss_pred EECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCC---ceEEEeCCCcEEEEEEE
Confidence 999999999999999999972 22234566777654 2222222 23567899999999999
Q ss_pred eccCCC-eEEEeeC--CeEeee------------ccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc-ceEEEE
Q psy12425 413 TGYPKP-KITWYRD--NEVIES------------GGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKI 476 (591)
Q Consensus 413 ~~~p~~-~v~W~~~--~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~ 476 (591)
.+.+.+ .+.|++. +..... ..++..........|+|.+++.+|+|.|.|.|.|..... ..-..|
T Consensus 166 ~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l 245 (257)
T 3gkz_A 166 SSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKL 245 (257)
T ss_dssp SSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEE
T ss_pred ccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEE
Confidence 998888 9999983 222210 134555555567789999999999999999998864332 333456
Q ss_pred EecCCCCC
Q psy12425 477 QISDRPDP 484 (591)
Q Consensus 477 ~v~~~p~~ 484 (591)
.|...|.+
T Consensus 246 ~v~~~~~~ 253 (257)
T 3gkz_A 246 EIKRAPHH 253 (257)
T ss_dssp EECCC---
T ss_pred EEEeCCCC
Confidence 66554433
No 215
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.77 E-value=2.1e-18 Score=148.52 Aligned_cols=75 Identities=16% Similarity=0.311 Sum_probs=59.2
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCC--ceeEEEeCCe--EEEEEcccCCCCceEEEEEEEcCCee
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD--RFKFTVLDDY--IIIFIKEIRKEDAGDYTVNLSNSSGS 76 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~--~~l~i~~~~~~d~g~Y~c~~~n~~g~ 76 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|+|..+.... ..++...++. ..|.|.+++.+|+|.|+|.+.|..|.
T Consensus 16 p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~ 94 (217)
T 2vr9_A 16 PTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQ 94 (217)
T ss_dssp CCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEE
T ss_pred CCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCc
Confidence 667899999999999999999999999999999987652 2233333332 22378899999999999999887654
No 216
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.77 E-value=5.4e-18 Score=146.06 Aligned_cols=169 Identities=14% Similarity=0.214 Sum_probs=116.9
Q ss_pred ccceeccccEEEEEEEcCC-CCCeeEEecCCc--cC----------------CCCCceEEEEeCCeEEEEEcceecccce
Q psy12425 301 NANAIQNHNAQFQCTITGC-PKPTISWLKGSR--EI----------------TPSARHHIFAEGDTYTLIINSVYGVDAD 361 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~-p~~~v~W~~~~~--~~----------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 361 (591)
.+.+.+|+.+.|.|.+.+. |.+.+.|++... .. ....++.+...+...+|.|.+++.+|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence 5668899999999999998 899999998321 10 0113555555667788999999999999
Q ss_pred EEEEEEEeCCc-----ceeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeec-cCCC-eEEEeeCCeEee
Q psy12425 362 EYVCRAVNKGG-----VKSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKP-KITWYRDNEVIE 430 (591)
Q Consensus 362 ~y~c~a~n~~g-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~~~~~~ 430 (591)
.|+|.|.|..| .......|.|.. +|.+...+ .......|+.+.|.|.+.+ .|.+ .+.|+++|..+.
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~---~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 165 (218)
T 3s96_B 89 IYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFP---PSSEELKENKATLVCLISNFSPSGVTVAWKANGTPIT 165 (218)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEEC---CCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC-
T ss_pred EEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeC---CCcccccCCcEEEEEEECcccCCCeEEEEEECCEECc
Confidence 99999999876 334456777773 33333211 1122345789999999998 5766 899999999886
Q ss_pred eccceE--EEecCC---eeEEEEeccCCCcceeEEEEEEcCCCccce
Q psy12425 431 SGGHFH--VETSER---HAILTIRDASNVDTAPYRVVAENDLGMDSA 472 (591)
Q Consensus 431 ~~~~~~--~~~~~~---~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~ 472 (591)
.+.... ....+. ...|.|.....+|.|.|+|.|.|..|....
T Consensus 166 ~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 212 (218)
T 3s96_B 166 QGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEK 212 (218)
T ss_dssp -------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEE
T ss_pred CceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccc
Confidence 532111 111111 244778888888899999999999875443
No 217
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.77 E-value=3.6e-17 Score=144.07 Aligned_cols=172 Identities=16% Similarity=0.247 Sum_probs=121.6
Q ss_pred eEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCcc--------------CCCCCceEEEEeCCeEEEEEcceeccc
Q psy12425 294 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSRE--------------ITPSARHHIFAEGDTYTLIINSVYGVD 359 (591)
Q Consensus 294 ~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~--------------~~~~~~~~~~~~~~~~~l~i~~~~~~d 359 (591)
.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++.... .....++.+...+...+|.|.+++.+|
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQED 85 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhh
Confidence 344445566788999999999999999999999984311 112346666667777899999999999
Q ss_pred ceEEEEEEEeCCcce-eeeeEEEEecCCc----------------ccCCCCcccceeecCCCeEEEEEeeeccC--CCeE
Q psy12425 360 ADEYVCRAVNKGGVK-STKAELIIMTAPK----------------FNVPPRFRDTAYFDKGENVVVKIPFTGYP--KPKI 420 (591)
Q Consensus 360 ~g~y~c~a~n~~g~~-~~~~~l~v~~~p~----------------~~~~~~~~~~~~~~~g~~~~l~c~~~~~p--~~~v 420 (591)
+|.|+|.|.|..+.. .....|.|..++. ............+.+|+.+.|.|.+.+.+ .+.+
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 165 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWM 165 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEE
T ss_pred CEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEE
Confidence 999999999876653 3345666655320 00000111235578999999999999877 7899
Q ss_pred EEeeC--CeEeee-----------------ccceEEEec--CCeeEEEEeccCCCcceeEEEEEEc
Q psy12425 421 TWYRD--NEVIES-----------------GGHFHVETS--ERHAILTIRDASNVDTAPYRVVAEN 465 (591)
Q Consensus 421 ~W~~~--~~~~~~-----------------~~~~~~~~~--~~~~~l~i~~~~~~~~g~y~c~a~n 465 (591)
.|+++ +..+.. ..++.+... .....|+|.++..+|+|.|.|.|.|
T Consensus 166 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 166 NWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 99997 433211 134444422 4556899999999999999999997
No 218
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.77 E-value=2.8e-17 Score=145.13 Aligned_cols=179 Identities=15% Similarity=0.218 Sum_probs=124.8
Q ss_pred ccceeccccEEEEEEEcCCC--CCeeEEecCC--ccC-----------------CCCCceEEEEe--CCeEEEEEcceec
Q psy12425 301 NANAIQNHNAQFQCTITGCP--KPTISWLKGS--REI-----------------TPSARHHIFAE--GDTYTLIINSVYG 357 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~~~ 357 (591)
...+.+|+.+.|.|.+.+.+ .+.+.|++.. ... ....++.+..+ ....+|.|.+++.
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (256)
T 3umt_A 11 LELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTS 90 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred ceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCc
Confidence 45588999999999999876 6789998732 111 01234555433 3466899999999
Q ss_pred ccceEEEEEEEeC----CcceeeeeEEEEec----------------CCcccCCCCcccceeecCCCeEEEEEeeeccCC
Q psy12425 358 VDADEYVCRAVNK----GGVKSTKAELIIMT----------------APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK 417 (591)
Q Consensus 358 ~d~g~y~c~a~n~----~g~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~ 417 (591)
+|+|.|.|.+.|. .+.......|.|.. +|.+...+ ....+..|+.+.|.|.+.+.+.
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~v~~G~~v~L~C~~~~~~~ 167 (256)
T 3umt_A 91 EDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSP---SSLSASLGERVSITCRASQDIG 167 (256)
T ss_dssp GGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEEC---SEEEECTTCCEEEEEEESSCCT
T ss_pred ccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCC---CeEEEECCCCEEEEEEEecCCC
Confidence 9999999999987 33334456777764 23322222 2356789999999999999999
Q ss_pred CeEEEeeC--CeEee------------eccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc-ceEEEEEecCCC
Q psy12425 418 PKITWYRD--NEVIE------------SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQISDRP 482 (591)
Q Consensus 418 ~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~~p 482 (591)
+.+.|++. +.... ...++..........|+|.+++.+|+|.|.|.|.|..+.. .....|.|..++
T Consensus 168 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 168 SNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAA 247 (256)
T ss_dssp TCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred cEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCC
Confidence 99999984 22211 1244555555667789999999999999999999865433 345566666543
No 219
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.77 E-value=1.3e-18 Score=149.06 Aligned_cols=169 Identities=15% Similarity=0.229 Sum_probs=119.4
Q ss_pred ccccceeccccEEEEEEEcCCCCCeeEEecCC--ccC------------CCCCceEEEEeCCeEEEEEcceecccceEEE
Q psy12425 299 LRNANAIQNHNAQFQCTITGCPKPTISWLKGS--REI------------TPSARHHIFAEGDTYTLIINSVYGVDADEYV 364 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 364 (591)
+....+.+|+.+.|.|.+.+.|.+.+.|+++. ..+ ....++.+...+...+|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 34566889999999999999888899998843 221 1135666666677789999999999999999
Q ss_pred EEEEeCCc-ce--eeeeEEEEe----cCCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeCCeEeeeccce
Q psy12425 365 CRAVNKGG-VK--STKAELIIM----TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRDNEVIESGGHF 435 (591)
Q Consensus 365 c~a~n~~g-~~--~~~~~l~v~----~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~~~~~~~ 435 (591)
|.|.|..+ .. .....+.|. .+|.+...+. ...+..|+.+.|.|.+.|. |. +.+.|+++|..+......
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~---~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 162 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPP---SPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKT 162 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCC---CHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCC---chHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeec
Confidence 99997322 21 233556664 3344333221 1223568999999999987 54 799999999888644221
Q ss_pred EE-EecC----CeeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 436 HV-ETSE----RHAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 436 ~~-~~~~----~~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
.. .... ....|.|.++..+|+|.|+|.|.|..+..
T Consensus 163 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (212)
T 1nfd_E 163 TKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETV 202 (212)
T ss_dssp CCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTC
T ss_pred CCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceE
Confidence 11 1111 13458899999999999999999997753
No 220
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.77 E-value=6.2e-17 Score=138.71 Aligned_cols=91 Identities=16% Similarity=0.235 Sum_probs=75.2
Q ss_pred CCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCC-CceEEec--eeeeeEEEEcCcccCceEEEEEEEE
Q psy12425 481 RPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM-SSWIRVG--NTRFTTMAITGLSPGHQYEFRVYAE 557 (591)
Q Consensus 481 ~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~-~~~~~~~--~~~~~~~~i~~l~~~~~Y~~~v~A~ 557 (591)
+|.+|.++.+...+.+++.|+|++|..+++..+.+|.|+++..+. ..|.... ......++|.+|.+++.|.|+|+|.
T Consensus 115 ~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 194 (214)
T 2ibg_A 115 PMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSF 194 (214)
T ss_dssp CCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeeccCCcceEEEeCCCCCCCEEEEEEEEE
Confidence 455677777777888999999998864566789999999998766 6777653 2235799999999999999999999
Q ss_pred cCCcCCCCCCCcce
Q psy12425 558 NVYGRSDPSTTSDL 571 (591)
Q Consensus 558 n~~G~~~~s~~~~~ 571 (591)
|..|.|++|....+
T Consensus 195 n~~G~g~~S~~~~~ 208 (214)
T 2ibg_A 195 SAASASEFSALKQG 208 (214)
T ss_dssp CSSCBCCCCCCEEE
T ss_pred cCCccCCCcceEee
Confidence 99999999987654
No 221
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.77 E-value=4.7e-17 Score=145.55 Aligned_cols=250 Identities=15% Similarity=0.134 Sum_probs=151.5
Q ss_pred EeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCccee
Q psy12425 296 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 375 (591)
Q Consensus 296 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~ 375 (591)
...+.-..+..|.++.|.|.+... . .|.|.+++..... ..++ +|.|.++...|+|.|+|.| .|...
T Consensus 10 v~~~~~~~~~~G~~v~l~C~~~~~-~-~i~W~~~~~~~~~-------~~~~--~L~i~~~~~~d~G~YtC~~---~~~~~ 75 (306)
T 3d85_D 10 VVELDWYPDAPGEMVVLTCDTPEE-D-GITWTLDQSSEVL-------GSGK--TLTIQVKEFGDAGQYTCHK---GGEVL 75 (306)
T ss_dssp EEEEECCSSCCCEEEEEECSSSCC-S-SCEEEETTCCCCC-------EESS--EEEEEECSGGGCEEEEEEE---TTEEE
T ss_pred EEeCCcccCccCCcEEEECCCCCC-C-cCEEEECCccccC-------CCCC--EEEEEecCcCCCceEEEee---CCccc
Confidence 333334456789999999998743 3 7999998875322 1222 7999999999999999999 35555
Q ss_pred eeeEEEEecCC------cccCCCCcccceeecCCCeEEEEEeeeccC-CCeEEEeeCCeEeeeccceEEEecC-------
Q psy12425 376 TKAELIIMTAP------KFNVPPRFRDTAYFDKGENVVVKIPFTGYP-KPKITWYRDNEVIESGGHFHVETSE------- 441 (591)
Q Consensus 376 ~~~~l~v~~~p------~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p-~~~v~W~~~~~~~~~~~~~~~~~~~------- 441 (591)
..+.+.|..++ .+...+. ..-....|.|.+...+ .....|..++..... ..|......
T Consensus 76 ~~~~l~v~~~~~~~~~t~i~~~~~-------~pp~~~~lsC~~~~~~~~~~C~W~pg~~~~l~-~~~~~~r~~~~~~~~~ 147 (306)
T 3d85_D 76 SHSLLLLHKKEDGIWSTDILKDQK-------EPKNKTFLRCEAKNYSGRFTCWWLTTISTDLT-FSVKSSRGSSDPQGVT 147 (306)
T ss_dssp EEEEEEEEEEETTEECCCSSCCCC----------CCCCCEEEBSSSSSEEEEEEEESCCSSEE-EEEEEEECSSSCEEEE
T ss_pred ceEEEEEEeccCCcceeeeecccC-------CCCCCCcceEEcCCcccCcEEEecCCCCCcee-EEEEEEecCCCCcceE
Confidence 56666665422 1111100 0011235667666555 556667665431100 011110000
Q ss_pred ------CeeEEEEe-------------ccC----CCcceeEEEEEEcCCCccceEEEEEe--cCCCCCCCCCeeeeecC-
Q psy12425 442 ------RHAILTIR-------------DAS----NVDTAPYRVVAENDLGMDSAIVKIQI--SDRPDPPQFPTVEDIGH- 495 (591)
Q Consensus 442 ------~~~~l~i~-------------~~~----~~~~g~y~c~a~n~~g~~~~~~~~~v--~~~p~~p~~~~~~~~~~- 495 (591)
....+.+. ... ....+.+.|.|.|..|..+....+.+ ..+|+||.++.+.....
T Consensus 148 C~~~~~~~~~c~v~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~~~~~~~~ 227 (306)
T 3d85_D 148 CGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNS 227 (306)
T ss_dssp ECCCEEEEEEEC--CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEEEECHHHHBCCCCCEEEEEEEC---
T ss_pred CCCCCCCccceeecCccccceeeeeeccccccccccEEEEEEEEEEccCCccccceEEEehhcEecCCCceEEEEEecCC
Confidence 00111111 111 12367789999999998766665554 36799999999887444
Q ss_pred CeeEEEeeccccCC---CcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcc
Q psy12425 496 DSLALVWRAPIWDG---GSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSD 570 (591)
Q Consensus 496 ~~v~l~W~~p~~~~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~ 570 (591)
..+.|+|++|..-+ +-....|+|+|+......|........+++.| .+++.|.|+|+|.|..|.|.+|+.+.
T Consensus 228 ~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~~~~~~~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS~ 302 (306)
T 3d85_D 228 RQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWAS 302 (306)
T ss_dssp -CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred CcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCccEEEeeccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCCC
Confidence 78999999875322 12347999999987766666554444456665 46999999999999999999998864
No 222
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.77 E-value=3.7e-17 Score=142.84 Aligned_cols=172 Identities=15% Similarity=0.167 Sum_probs=120.2
Q ss_pred EEeeccccceeccccEEEEEEEcCCCCCeeEEecCCc--cC------------CCCCceEEEEeCCeEEEEEcceecccc
Q psy12425 295 IIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSR--EI------------TPSARHHIFAEGDTYTLIINSVYGVDA 360 (591)
Q Consensus 295 ~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~--~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 360 (591)
+...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++.. .. ....++.+...+...+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 3444566778999999999999999999999998531 11 113466666666778999999999999
Q ss_pred eEEEEEEEeCCcce-eeeeEEEEecCCcc--------cCCCC--cccceeecCCCeEEEEEeeeccC--CCeEEEeeCC-
Q psy12425 361 DEYVCRAVNKGGVK-STKAELIIMTAPKF--------NVPPR--FRDTAYFDKGENVVVKIPFTGYP--KPKITWYRDN- 426 (591)
Q Consensus 361 g~y~c~a~n~~g~~-~~~~~l~v~~~p~~--------~~~~~--~~~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~- 426 (591)
|.|.|.|.|..+.. .....|.|..+|.. ..+.. ......+.+|+.+.|.|.+.+.| .+.+.|++++
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~ 163 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFP 163 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECT
T ss_pred EEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCC
Confidence 99999999976532 33457777765530 00000 01123478999999999999876 5789999852
Q ss_pred -eEee----------------eccceEEEe--cCCeeEEEEeccCCCcceeEEEEEEcC
Q psy12425 427 -EVIE----------------SGGHFHVET--SERHAILTIRDASNVDTAPYRVVAEND 466 (591)
Q Consensus 427 -~~~~----------------~~~~~~~~~--~~~~~~l~i~~~~~~~~g~y~c~a~n~ 466 (591)
.... ...++.+.. ......|+|.+++.+|+|.|.|.|.|.
T Consensus 164 ~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 164 GNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp TSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 2221 123444443 234679999999999999999999984
No 223
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.77 E-value=1.1e-17 Score=143.23 Aligned_cols=168 Identities=13% Similarity=0.190 Sum_probs=118.8
Q ss_pred ccccceeccccEEEEEEEcCCC---CCeeEEecCC--ccC------------CCCCceEEEEeCCeEEEEEcceecccce
Q psy12425 299 LRNANAIQNHNAQFQCTITGCP---KPTISWLKGS--REI------------TPSARHHIFAEGDTYTLIINSVYGVDAD 361 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~p---~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 361 (591)
+....+.+|+.+.|.|.+.+.| .+.+.|++++ ..+ ....++.+...+...+|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 4566789999999999999887 4789999853 221 1234566666677789999999999999
Q ss_pred EEEEEEEeCCcce-eeeeEEEEe----cCCcccCCCCcccceeecCCCeEEEEEeeeccCCC--eEEEeeCCeEeeeccc
Q psy12425 362 EYVCRAVNKGGVK-STKAELIIM----TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP--KITWYRDNEVIESGGH 434 (591)
Q Consensus 362 ~y~c~a~n~~g~~-~~~~~l~v~----~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~--~v~W~~~~~~~~~~~~ 434 (591)
.|.|.|.|..+.. .....+.|. .+|.+...+. ...+..|+.+.|.|.+.+.+++ .|.|+++|..+..+..
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~---~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 163 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPP---SSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGME 163 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECC---CHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCC---CHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCee
Confidence 9999999987643 234556664 2333332111 1123468899999999986443 8999999988864422
Q ss_pred eE--EEecC----CeeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 435 FH--VETSE----RHAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 435 ~~--~~~~~----~~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
.. ....+ ....|.|.....+|.|.|+|.|.|....
T Consensus 164 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 164 TTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHS 204 (212)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEE
T ss_pred cCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcc
Confidence 11 11111 1356889999999999999999998655
No 224
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.77 E-value=2.2e-17 Score=145.85 Aligned_cols=178 Identities=16% Similarity=0.208 Sum_probs=125.5
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCC--CCCeeEEecCC--ccC-----------------CCCCceEEEEe--CCe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGC--PKPTISWLKGS--REI-----------------TPSARHHIFAE--GDT 347 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~~--~~~-----------------~~~~~~~~~~~--~~~ 347 (591)
.+|.+...+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. ... ....++.+..+ +..
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 46677777788889999999999999883 67889998732 110 11235555533 446
Q ss_pred EEEEEcceecccceEEEEEEEeC------------CcceeeeeEEEEecCCcccC---------CC---CcccceeecCC
Q psy12425 348 YTLIINSVYGVDADEYVCRAVNK------------GGVKSTKAELIIMTAPKFNV---------PP---RFRDTAYFDKG 403 (591)
Q Consensus 348 ~~l~i~~~~~~d~g~y~c~a~n~------------~g~~~~~~~l~v~~~p~~~~---------~~---~~~~~~~~~~g 403 (591)
.+|.|.+++.+|+|.|.|.+.|. .+.......|.|...+.... ++ .......+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 78999999999999999999986 33334456777766432100 00 11234567899
Q ss_pred CeEEEEEeeeccCC-CeEEEeeC--CeEee------------eccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCC
Q psy12425 404 ENVVVKIPFTGYPK-PKITWYRD--NEVIE------------SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLG 468 (591)
Q Consensus 404 ~~~~l~c~~~~~p~-~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g 468 (591)
+.+.|.|.+.+.+. +.+.|++. +.... ...++.+........|+|.+++.+|+|.|.|.|.|..+
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 99999999998876 89999883 22221 12455555556678899999999999999999998643
No 225
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.76 E-value=2.3e-17 Score=144.17 Aligned_cols=168 Identities=15% Similarity=0.299 Sum_probs=117.7
Q ss_pred EeeccccceeccccEEEEEEEcCCCCCeeEEecCC--cc---------------CCCCCceEEEE-eCCeEEEEEcceec
Q psy12425 296 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGS--RE---------------ITPSARHHIFA-EGDTYTLIINSVYG 357 (591)
Q Consensus 296 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~--~~---------------~~~~~~~~~~~-~~~~~~l~i~~~~~ 357 (591)
...+..+.+.+|+.+.|.|. .+.|.+.+.|+++. .. .....++.+.. .+...+|.|.+++.
T Consensus 4 ~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~ 82 (238)
T 2p1y_A 4 TQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATP 82 (238)
T ss_dssp EEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCG
T ss_pred eECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCc
Confidence 34455677899999999999 78889999999852 11 01123454443 23456899999999
Q ss_pred ccceEEEEEEEeCCcce-----eeeeEEEEecCCc------------ccCCCCcccceeecCCCeEEEEEeeeccCCCeE
Q psy12425 358 VDADEYVCRAVNKGGVK-----STKAELIIMTAPK------------FNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKI 420 (591)
Q Consensus 358 ~d~g~y~c~a~n~~g~~-----~~~~~l~v~~~p~------------~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v 420 (591)
+|+|.|+|.|.|..|.. .....|.|...+. +...+ ....+.+|+.+.|.|.+.+.|.+.+
T Consensus 83 ~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p---~~~~v~~G~~v~L~C~~~~~p~~~i 159 (238)
T 2p1y_A 83 SQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSP---QSLTVWEGETAILNCSYENSAFDYF 159 (238)
T ss_dssp GGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEEC---SEEEEETTSCEEEEEECCCTTCCEE
T ss_pred ccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccC---ceEEEeCCCeEEEEEEEecCCCCcE
Confidence 99999999999986531 2345677765442 11111 3355789999999999999999999
Q ss_pred EEeeCCe-----Ee---------eeccceEEE--ecCCeeEEEEeccCCCcceeEEEEEEcCC
Q psy12425 421 TWYRDNE-----VI---------ESGGHFHVE--TSERHAILTIRDASNVDTAPYRVVAENDL 467 (591)
Q Consensus 421 ~W~~~~~-----~~---------~~~~~~~~~--~~~~~~~l~i~~~~~~~~g~y~c~a~n~~ 467 (591)
.|++++. .+ ....++.+. .......|.|.++..+|+|.|.|.|.|..
T Consensus 160 ~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 160 PWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9999641 11 123344443 23456789999999999999999999984
No 226
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=3.1e-17 Score=143.59 Aligned_cols=171 Identities=16% Similarity=0.216 Sum_probs=123.2
Q ss_pred EeeccccceeccccEEEEEEEcCCC----CCeeEEecCC--ccC------------CCCCceEEEEeCCeEEEEEcceec
Q psy12425 296 IVPLRNANAIQNHNAQFQCTITGCP----KPTISWLKGS--REI------------TPSARHHIFAEGDTYTLIINSVYG 357 (591)
Q Consensus 296 ~~~~~~~~~~~g~~~~l~c~~~~~p----~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~ 357 (591)
...+....+.+|+.+.|.|.+.+.| .+.+.|+++. ... ....++.+...+...+|.|.+++.
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (240)
T 1moe_A 5 TQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEA 84 (240)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCCh
Confidence 3445567789999999999999998 7899999853 211 113466666667778999999999
Q ss_pred ccceEEEEEEEeCCcc-eeeeeEEEEecCCcccCCC---CcccceeecCCCeEEEEEeeeccC--CCeEEEeeC--CeEe
Q psy12425 358 VDADEYVCRAVNKGGV-KSTKAELIIMTAPKFNVPP---RFRDTAYFDKGENVVVKIPFTGYP--KPKITWYRD--NEVI 429 (591)
Q Consensus 358 ~d~g~y~c~a~n~~g~-~~~~~~l~v~~~p~~~~~~---~~~~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~--~~~~ 429 (591)
+|+|.|+|.|.|..+. ......|.|..++....++ .......+..|+.+.|.|.+.+.| .+.+.|+++ +...
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~ 164 (240)
T 1moe_A 85 DDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGL 164 (240)
T ss_dssp GGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCC
T ss_pred hhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCc
Confidence 9999999999998665 3445677777654211110 011234678999999999999987 469999996 2221
Q ss_pred e-----------------eccceEEEec--CCeeEEEEeccCCCcceeEEEEEEcC
Q psy12425 430 E-----------------SGGHFHVETS--ERHAILTIRDASNVDTAPYRVVAEND 466 (591)
Q Consensus 430 ~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~~~g~y~c~a~n~ 466 (591)
. ...++.+... .....|.|.+++.+|+|.|.|.|.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 165 EWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp EEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred EEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 1 1124444432 45678999999999999999999854
No 227
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.76 E-value=6.6e-16 Score=138.86 Aligned_cols=247 Identities=16% Similarity=0.191 Sum_probs=178.7
Q ss_pred CCeEEEEEEeccCCCceEEEEECC-----EEee------cCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeE
Q psy12425 10 GDNTKVKIFYAGDQPMEVSLTKNG-----RVVQ------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 78 (591)
Q Consensus 10 G~~~~l~C~~~~~p~~~v~W~~~~-----~~~~------~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~ 78 (591)
+-...|.+...+.....++|.... -.|. .+....+........+.|.+|.+...|.+++.|.|..|...
T Consensus 16 ~~P~~l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~ 95 (283)
T 1tdq_A 16 DGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESD 95 (283)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred CCCcEEEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEEEEEEECCCCCCC
Confidence 445566666655556778887643 1111 01112223334456889999999999999999999887753
Q ss_pred EEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecC---cceEEEcCCcC
Q psy12425 79 GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCH---DTTFIVQGLTE 155 (591)
Q Consensus 79 ~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~ 155 (591)
...+.+...|.+|.. +.+......++.|.|.+|. ..+..|.+.+.......+........ ...+.+.+|.+
T Consensus 96 -~~~~~~~t~p~~P~~-l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 169 (283)
T 1tdq_A 96 -ASSTQFTTEIDAPKN-LRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVP 169 (283)
T ss_dssp -CEEEEEECCCCCCEE-EEEEEECSSCEEEEEECCS----SCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCT
T ss_pred -CeeEEEECCCCCCCc-eEEEecCCCeEEEEecCCC----CCccEEEEEEEeCCCCcceEEECCCCCcccceEEEecCCC
Confidence 355666677777765 6677778899999999876 36889999999887766655554444 78899999999
Q ss_pred CcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCc
Q psy12425 156 GQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA 235 (591)
Q Consensus 156 ~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~ 235 (591)
++.|.|+|.|.|..|.+..... .... .|.+|..+.+.....+++.|+|.++ ...+.+|.+.+...+..
T Consensus 170 ~t~Y~~~V~A~n~~g~s~~~~~----~~~t---~~~~P~~l~~~~~~~~sv~l~W~~p----~~~i~~Y~v~~~~~~~~- 237 (283)
T 1tdq_A 170 GTEYGVGISAVMNSKQSIPATM----NART---ELDSPRDLMVTASSETSISLIWTKA----SGPIDHYRITFTPSSGI- 237 (283)
T ss_dssp TCEEEEEEEEEETTEECCCEEE----EEEC---CCCCCEEEEEEEECSSCEEEEEECC----CSCCSEEEEEEECSSSC-
T ss_pred CCEEEEEEEEEeCCCCCcceEE----EecC---CCCCCCccEEeEecCCEEEEEEeCC----CCcccEEEEEEEcCCCC-
Confidence 9999999999998886654321 1111 3445667777788889999999985 24678999999876543
Q ss_pred cEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCC
Q psy12425 236 WQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLP 275 (591)
Q Consensus 236 ~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~ 275 (591)
+.... .......+.|.+|.++..|.|+++|.|..|.+..
T Consensus 238 ~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~ 276 (283)
T 1tdq_A 238 SSEVT-VPRDRTSYTLTDLEPGAEYIISITAERGRQQSLE 276 (283)
T ss_dssp CEEEE-EESSCSEEEECCCCTTCCEEEEEEEEETTEECCC
T ss_pred eeEEE-eCCCccEEEECCCCCCCEEEEEEEEEcCCCCCcc
Confidence 32222 2345678999999999999999999998887653
No 228
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.76 E-value=1.5e-17 Score=145.42 Aligned_cols=180 Identities=16% Similarity=0.211 Sum_probs=125.7
Q ss_pred CeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCc--c------------CCCCCceEEEEeCCeEEEEEcceecc
Q psy12425 293 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSR--E------------ITPSARHHIFAEGDTYTLIINSVYGV 358 (591)
Q Consensus 293 p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~--~------------~~~~~~~~~~~~~~~~~l~i~~~~~~ 358 (591)
+.+...+....+.+|+.+.|.|.+.+.+.+.+.|++... . .....++.+...+...+|.|.+++.+
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 104 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 104 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChh
Confidence 344555566778999999999999999999999988421 1 11235666666677889999999999
Q ss_pred cceEEEEEEEeCCcce-eeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeecc-C-CCeEEEeeCCeEeeec
Q psy12425 359 DADEYVCRAVNKGGVK-STKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-P-KPKITWYRDNEVIESG 432 (591)
Q Consensus 359 d~g~y~c~a~n~~g~~-~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p-~~~v~W~~~~~~~~~~ 432 (591)
|+|.|+|.+.|..+.. .....+.|.. +|.+...+ ....+..|+.+.|.|.+.+. | .+.+.|+++|..+..+
T Consensus 105 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~---~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~ 181 (237)
T 3sob_L 105 DFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFP---PSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 181 (237)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEEC---CCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred hCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeC---CChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCc
Confidence 9999999999877643 3345666643 33332211 11123358889999999884 4 5899999999887643
Q ss_pred c--ceEEEecCC-----eeEEEEeccCCCcceeEEEEEEcCCCccceEEE
Q psy12425 433 G--HFHVETSER-----HAILTIRDASNVDTAPYRVVAENDLGMDSAIVK 475 (591)
Q Consensus 433 ~--~~~~~~~~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~ 475 (591)
. ........+ ...|.|.....+|.|.|+|.|.|..........
T Consensus 182 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 231 (237)
T 3sob_L 182 SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKS 231 (237)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEE
T ss_pred eeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeee
Confidence 1 111111111 456889999999999999999999765544333
No 229
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.76 E-value=1.3e-14 Score=136.11 Aligned_cols=432 Identities=14% Similarity=0.092 Sum_probs=239.9
Q ss_pred ceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccc
Q psy12425 104 HTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKA 183 (591)
Q Consensus 104 ~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~ 183 (591)
.....+|.++...+ .-+.|.+-+.. ....+. ....+.+.|..|.+++ +.+.+......|...... ....
T Consensus 10 ~~~~c~w~~~~~~~--~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~ 78 (483)
T 3e0g_A 10 QVWQCSWKAPSGTG--RGTDYEVCIEQ----RSRSCY-QLEKTSIKIPALSHGD-YEITINSLHDFGSSTSKF---TLNE 78 (483)
T ss_dssp TEEEEBCCCCSSSC--SSCCEEEEECS----SSCEEE-EESSSBCCEECCSSSC-CCEEEECSSCC----CCC---EECC
T ss_pred eEEEEeccCCCCCC--CCceEEEEEeC----Ccccch-hhhccceEeecCCccc-eEEEEcccCCCCCCceeE---EEEc
Confidence 35678898776322 22346665333 111111 2366778889998888 445444444443333221 2223
Q ss_pred cCCCCCCCCCCCCeEEeecC-CeEEEEEecCCCCC-CcceEEEEEEeeecCCCc--cEEEEe-eecC-Cceee----ecC
Q psy12425 184 KSPYDKPSPPGIPVVTQVGG-DFVNLSWDKPLDDG-GSRIQGYWIDKHEVGSDA--WQRVNV-AICA-PSQIN----IPN 253 (591)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~~-~~v~l~w~~~~~~~-~~~~~~y~~~~~~~~~~~--~~~~~~-~~~~-~~~~~----i~~ 253 (591)
+.....|..|..+.+..... ..+.|+|......- ...-..|.|+........ |...-. .... ...+. -.-
T Consensus 79 ~~~~~~p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~i~i~r~~~~~~v~~~~~~~~~~~~~~~~~w~w~s~~ 158 (483)
T 3e0g_A 79 QNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDM 158 (483)
T ss_dssp SCCEECCCCCCBCCCEEETTTTEEEEEEEECGGGCCSCCEEEEEEEEESSSSCEEEEEEEEEECGGGCCEEEEEEEECSS
T ss_pred ccceeccCCCceEEEEecCCCcEEEEEEeCCCCCCCcccceEEEEEEEEcCCccEEEEEEEEEEecCCCceEEEEecCCC
Confidence 33335677777777766655 89999998753221 113445777766554332 222111 1101 11111 111
Q ss_pred cccCCcEEEEEEEE-c---CCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecC
Q psy12425 254 LIEGRQYEFRVYAQ-N---EAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKG 329 (591)
Q Consensus 254 l~~~~~~~y~c~a~-n---~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~ 329 (591)
-.+...+..++++. + -.|.+.++.-+...++.... ...+ ...+++..+..|.++++.|..... ......+
T Consensus 159 plec~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~-~~~~--~ifP~~~vv~~GS~vt~~Ci~~~~---~~~~~l~ 232 (483)
T 3e0g_A 159 PLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIP-DSQT--KVFPQDKVILVGSDITFCCVSQEK---VLSALIG 232 (483)
T ss_dssp CTTSSCEEEEEEEEEECTTCCSEECCCCCCCCEEECCCC-CSSC--CEESCSEEEETTCCEEEEECCSSC---EEEEESS
T ss_pred CCCCCccEEEEEEEecccccCCCCCCcCCCChhhccccC-CCCc--EEeccCCEEeCCCCEEEEEEeCcc---ccceecC
Confidence 12456677788877 2 24554556555444443211 1122 445566678899999999987632 2222222
Q ss_pred CccCCCCCceEEEEeCCeEEEEEcceecc--cceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEE
Q psy12425 330 SREITPSARHHIFAEGDTYTLIINSVYGV--DADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVV 407 (591)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~--d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~ 407 (591)
+. .......++....+++.|+... ....|.|... .......+.+..+|..+ ........+.-.
T Consensus 233 ~~-----~~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~----~~~~g~~l~vg~PP~~P------~nlsC~s~~~~s 297 (483)
T 3e0g_A 233 HT-----NCPLIHLDGENVAIKIRNISVSASSGTNVVFTTE----DNIFGTVIFAGYPPDTP------QQLNCETHDLKE 297 (483)
T ss_dssp SC-----CBCCEECSSSCEEEEECSCCCCCSSCEEEEEEES----SCEEEEEEEEECCCCCC------EEEEEEBSSTTE
T ss_pred cc-----cceeEEecCCEEEEEEeCCCCccCccceEEEecC----CcccceEEECcCCCCCC------CccEEEecCCCE
Confidence 11 1111223444567888888653 2345999852 23445667777766422 111111111114
Q ss_pred EEEeeeccC-C-------C--eEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEE
Q psy12425 408 VKIPFTGYP-K-------P--KITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 408 l~c~~~~~p-~-------~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
|.|...... . . .+.+.+.+....- ..+.. ..+......+..+.....|.+++.|.|..|.......+.
T Consensus 298 ltCsW~pg~dt~l~G~~~t~YtL~y~~~g~~~~C-~~~~~-~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~~ 375 (483)
T 3e0g_A 298 IICSWNPGRVTALVGPRATSYTLVESFSGKYVRL-KRAEA-PTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVN 375 (483)
T ss_dssp EEEEEECCSCCSCCGGGCCEEEEEETTTCCEEEE-CCCSS-CSCSCEEEEEECCTTCCCEEEEEEEECSSCEEEEEEEEC
T ss_pred EEEEECCCCcCCcCCCCCeeEEEEEEECCCCccc-cCCcc-cCCCEEEEEEccCCCCcEEEEEEEEEeCCCCcccceEEE
Confidence 555543211 1 1 2333322221100 00000 012345678888888889999999999999876544444
Q ss_pred ec--CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCC-ceEEece----eeeeEEEEcCcccCceE
Q psy12425 478 IS--DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS-SWIRVGN----TRFTTMAITGLSPGHQY 550 (591)
Q Consensus 478 v~--~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~-~~~~~~~----~~~~~~~i~~l~~~~~Y 550 (591)
+. .+|.||.++.+.....+.+.|+|++|.. .+..+..|+|+|+..... .|....- .....+.+.+|.|++.|
T Consensus 376 ~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~-~~~~~L~YeVrYr~~~~~~~~~~vsv~~~~~~~~s~~l~~L~PgT~Y 454 (483)
T 3e0g_A 376 ITEKVYPHTPTSFKVKDINSTAVKLSWHLPGN-FAKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLY 454 (483)
T ss_dssp GGGGBCCCCCEEEEECCSSSSSCCEEEECCSC-CTTSBCCCEEEEECSSSCCCEEECCCBCCSSSBCCCCCCSCCSSSSC
T ss_pred eccccCCCCCeeeEEEEecCCeEEEEECCCCC-CCCceEEEEEEEEECCCCCceEEEEEeccCCceeEEEEeccCCCcEE
Confidence 33 4789999999887788999999998863 334678999999987654 3554321 12336789999999999
Q ss_pred EEEEEEEcCCcC---CCCCCCcce
Q psy12425 551 EFRVYAENVYGR---SDPSTTSDL 571 (591)
Q Consensus 551 ~~~v~A~n~~G~---~~~s~~~~~ 571 (591)
.|+|+|. ..|. |++|.+..+
T Consensus 455 ~vrVRA~-~~g~g~WSeWS~~~~f 477 (483)
T 3e0g_A 455 TFRIRCS-TETFWKWSKWSNKKQH 477 (483)
T ss_dssp EEEEECC-CSSCCCCCCCCCCCCC
T ss_pred EEEEEEe-eCCCCCcCCCCCceee
Confidence 9999999 6777 566655444
No 230
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=4.2e-17 Score=146.00 Aligned_cols=181 Identities=14% Similarity=0.211 Sum_probs=125.0
Q ss_pred ccccceeccccEEEEEEEcCCC--CCeeEEecCCc--cCC-----------------CCCceEEEEe--CCeEEEEEcce
Q psy12425 299 LRNANAIQNHNAQFQCTITGCP--KPTISWLKGSR--EIT-----------------PSARHHIFAE--GDTYTLIINSV 355 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~~--~~~-----------------~~~~~~~~~~--~~~~~l~i~~~ 355 (591)
+....+.+|+.+.|.|.+.+.+ .+.+.|++++. ... ...++.+..+ +...+|.|.++
T Consensus 33 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 112 (282)
T 1qok_A 33 SGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSL 112 (282)
T ss_dssp CCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcC
Confidence 3456788999999999998875 68899998532 110 1235555543 34678999999
Q ss_pred ecccceEEEEEEEeCCcc-----eeeeeEEEEecCCcc---------cCCCCc---ccceeecCCCeEEEEEeeeccCCC
Q psy12425 356 YGVDADEYVCRAVNKGGV-----KSTKAELIIMTAPKF---------NVPPRF---RDTAYFDKGENVVVKIPFTGYPKP 418 (591)
Q Consensus 356 ~~~d~g~y~c~a~n~~g~-----~~~~~~l~v~~~p~~---------~~~~~~---~~~~~~~~g~~~~l~c~~~~~p~~ 418 (591)
+.+|+|.|.|.+.|..|. ......|.|...|.. ..++.+ .....+.+|+.++|.|.+.+.+ +
T Consensus 113 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~ 191 (282)
T 1qok_A 113 TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-S 191 (282)
T ss_dssp CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-S
T ss_pred ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-c
Confidence 999999999999998761 123457777765420 011111 1234578999999999999999 9
Q ss_pred eEEEee--CCeEee------------eccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc-ceEEEEEecC
Q psy12425 419 KITWYR--DNEVIE------------SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIVKIQISD 480 (591)
Q Consensus 419 ~v~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~~~~v~~ 480 (591)
.+.|++ ++..+. ...++.+........|+|.++..+|+|.|.|.|.|..+.. .....|.|..
T Consensus 192 ~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 192 YMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp CCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred eEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 999999 554331 1245555545567789999999999999999999864322 3345566654
No 231
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.76 E-value=5.7e-18 Score=151.17 Aligned_cols=182 Identities=13% Similarity=0.212 Sum_probs=123.8
Q ss_pred CeEEeeccccceeccccEEEEEEEc---CCCCCeeEEecCCccCCCC------------------CceEEEE--eCCeEE
Q psy12425 293 PEIIVPLRNANAIQNHNAQFQCTIT---GCPKPTISWLKGSREITPS------------------ARHHIFA--EGDTYT 349 (591)
Q Consensus 293 p~~~~~~~~~~~~~g~~~~l~c~~~---~~p~~~v~W~~~~~~~~~~------------------~~~~~~~--~~~~~~ 349 (591)
+.+...+..+.+.+|+.+.|.|.+. +.+.+.+.|++++...... .+..+.. .....+
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 3444455567789999999999997 7788899999965433221 1222110 112247
Q ss_pred EEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEee---eccCCCeEEEeeCC
Q psy12425 350 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF---TGYPKPKITWYRDN 426 (591)
Q Consensus 350 l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~---~~~p~~~v~W~~~~ 426 (591)
|.|.+++.+|+|.|+|.|.|..+.......+.+...|. ......+..|+.+.|.|.+ .+.|.+.+.|++++
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~------~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~ 159 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE------EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSS 159 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC------CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEEC
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc------CCCccccccCCcEEEEEEecCCCCCCccceEEEecC
Confidence 99999999999999999999766554433333333222 1134567899999999999 67799999999943
Q ss_pred e-Eeeec-----------------c----ceEEE--ecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecC
Q psy12425 427 E-VIESG-----------------G----HFHVE--TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 427 ~-~~~~~-----------------~----~~~~~--~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
. ..... . +..+. .......|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 237 (268)
T 3mj6_A 160 GSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ 237 (268)
T ss_dssp TTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc
Confidence 2 11100 0 11111 013467899999999999999999999999988888888854
No 232
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.76 E-value=1.4e-17 Score=141.51 Aligned_cols=79 Identities=27% Similarity=0.426 Sum_probs=64.8
Q ss_pred ccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEE
Q psy12425 301 NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAEL 380 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l 380 (591)
...+..|+.+.|.|.+.+.|.+.+.|++++..+.... .+...+ ..|.|.++..+|.|.|+|.|.|..|.....+.|
T Consensus 122 ~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~--~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 197 (201)
T 3s97_C 122 DVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA--EISTSG--AVLKIFNIQLEDEGIYECEAENIRGKDKHQARI 197 (201)
T ss_dssp CEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTC--EEETTT--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCce--eecCCC--CEEEEccCChhhCEEEEEEEEecCCceeeeEEE
Confidence 3446788899999999999999999999998776442 222222 379999999999999999999999999888888
Q ss_pred EEe
Q psy12425 381 IIM 383 (591)
Q Consensus 381 ~v~ 383 (591)
.|.
T Consensus 198 ~V~ 200 (201)
T 3s97_C 198 YVQ 200 (201)
T ss_dssp EEE
T ss_pred EEe
Confidence 775
No 233
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.76 E-value=1.5e-16 Score=135.15 Aligned_cols=186 Identities=19% Similarity=0.295 Sum_probs=140.1
Q ss_pred EecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCC-CceEEEEe--ecCcceEEEcCCcCCcEEEE
Q psy12425 85 ITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM-PHWICIST--TCHDTTFIVQGLTEGQEYLF 161 (591)
Q Consensus 85 v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~-~~~~~~~~--~~~~~~~~i~~l~~~~~y~~ 161 (591)
|...|.+|.. +.+.. ...++.|+|.+|. +++..+..|.++++.... ..|..... ......+.+ +|.+++.|.|
T Consensus 2 v~~~P~~P~~-~~~~~-~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~ 77 (205)
T 1cfb_A 2 VQDVPNAPKL-TGITC-QADKAEIHWEQQG-DNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTF 77 (205)
T ss_dssp CCCCCCCCEE-EEEEE-CSSEEEEEEECCC-CTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEE
T ss_pred cccCCCCCCC-cEEEe-cCCEEEEEEECcc-cCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEE
Confidence 4567787776 56777 8899999999885 556789999999987643 56754432 234556666 9999999999
Q ss_pred EEEEEccCCCCCCCC-ccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCC-CCCcceEEEEEEeeecCCCc-cEE
Q psy12425 162 HVMAVNENGMGPPLE-GINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLD-DGGSRIQGYWIDKHEVGSDA-WQR 238 (591)
Q Consensus 162 ~~~a~n~~g~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~-~~~~~~~~y~~~~~~~~~~~-~~~ 238 (591)
+|.|.|..|.+..+. .....+. ...++.+|..+.+.....+++.|+|.+|.. ..+..+.+|.|.++..+... |..
T Consensus 78 ~V~A~n~~G~~~~s~~~~~~~T~--~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~ 155 (205)
T 1cfb_A 78 RVIAFNKIGASPPSAHSDSCTTQ--PDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN 155 (205)
T ss_dssp EEEEEETTEECCCCCCCCCEEEC--CCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE
T ss_pred EEEEEECCccCCCCCCceeEEcC--CcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEE
Confidence 999999999887763 2222221 122334677788888888899999999862 23346889999998876654 777
Q ss_pred EEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCC
Q psy12425 239 VNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 276 (591)
Q Consensus 239 ~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s 276 (591)
..........+.|.+|.++..|.|+++|.|..|.+..+
T Consensus 156 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 193 (205)
T 1cfb_A 156 NNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVA 193 (205)
T ss_dssp EEECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSC
T ss_pred EEecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCC
Confidence 66554456899999999999999999999999988743
No 234
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.76 E-value=1.3e-17 Score=121.76 Aligned_cols=87 Identities=33% Similarity=0.557 Sum_probs=78.9
Q ss_pred CCceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCC--ceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeE
Q psy12425 1 MPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD--RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVS 78 (591)
Q Consensus 1 ~p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~ 78 (591)
.|.++.+.+|+++.|.|.+.|.|.|.|.|+|||+.|.... ++.+...++..+|.|.+++.+|+|.|+|.|.|..|..+
T Consensus 11 ~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 90 (100)
T 3knb_A 11 LPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDS 90 (100)
T ss_dssp CCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred CCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEE
Confidence 3788999999999999999999999999999999997653 56677777888999999999999999999999999999
Q ss_pred EEEEEEEec
Q psy12425 79 GTFTINITG 87 (591)
Q Consensus 79 ~~~~l~v~~ 87 (591)
.++.|.|..
T Consensus 91 ~~~~l~V~~ 99 (100)
T 3knb_A 91 ATVNIHIRS 99 (100)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEE
Confidence 999998864
No 235
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.76 E-value=2e-17 Score=142.13 Aligned_cols=170 Identities=18% Similarity=0.215 Sum_probs=117.0
Q ss_pred cccceeccccEEEEEEE-cCCC-CCeeEEecCCc--cC------------CCCCceEEEEeCCeEEEEEcceecccceEE
Q psy12425 300 RNANAIQNHNAQFQCTI-TGCP-KPTISWLKGSR--EI------------TPSARHHIFAEGDTYTLIINSVYGVDADEY 363 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~-~~~p-~~~v~W~~~~~--~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 363 (591)
....+.+|+.+.|.|.+ .+.+ .+.+.|++++. .+ ....++.+...+...+|.|.+++.+|+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 87 (216)
T 2xzc_L 8 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADY 87 (216)
T ss_dssp SEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEE
Confidence 44568899999999995 4443 57999998532 11 113466666667778999999999999999
Q ss_pred EEEEEeCCc--ceeeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeec-cCCC-eEEEeeCCeEeeeccceE
Q psy12425 364 VCRAVNKGG--VKSTKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKP-KITWYRDNEVIESGGHFH 436 (591)
Q Consensus 364 ~c~a~n~~g--~~~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~~~~~~~~~~~~ 436 (591)
+|.|.|..+ .......|.|.. +|.+...+. ......|+.+.|.|.+.| .|.+ .|.|+++|..+..+....
T Consensus 88 ~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~---~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 164 (216)
T 2xzc_L 88 YCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPP---SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQES 164 (216)
T ss_dssp EEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECC---CHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEE
T ss_pred EEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCC---ChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEe
Confidence 999999876 223345666653 333332111 111235889999999998 4554 899999999876541111
Q ss_pred --EEecCC-----eeEEEEeccCCCcceeEEEEEEcCCCccce
Q psy12425 437 --VETSER-----HAILTIRDASNVDTAPYRVVAENDLGMDSA 472 (591)
Q Consensus 437 --~~~~~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~ 472 (591)
.....+ .+.|.|.....+|.|.|+|.|.|.......
T Consensus 165 ~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (216)
T 2xzc_L 165 VTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 207 (216)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred cCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCce
Confidence 111111 247899999999999999999998765443
No 236
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.75 E-value=5.9e-17 Score=142.38 Aligned_cols=169 Identities=19% Similarity=0.229 Sum_probs=119.5
Q ss_pred EeeccccceeccccEEEEEEEcCCC-----CCeeEEecCC--ccC------------CCCCceEEEEeCCeEEEEEccee
Q psy12425 296 IVPLRNANAIQNHNAQFQCTITGCP-----KPTISWLKGS--REI------------TPSARHHIFAEGDTYTLIINSVY 356 (591)
Q Consensus 296 ~~~~~~~~~~~g~~~~l~c~~~~~p-----~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~ 356 (591)
...+..+.+.+|+.+.|.|.+.+.+ .+.+.|+++. ... ....++.+...+...+|.|.+++
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 84 (247)
T 1svz_A 5 TQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVE 84 (247)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred EecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCC
Confidence 3445567789999999999999988 6899998842 111 01346666666777899999999
Q ss_pred cccceEEEEEEEeCCcce-eeeeEEEEecCCc------------ccCCCCcccceeecCCCeEEEEEeeeccC--CCeEE
Q psy12425 357 GVDADEYVCRAVNKGGVK-STKAELIIMTAPK------------FNVPPRFRDTAYFDKGENVVVKIPFTGYP--KPKIT 421 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~~-~~~~~l~v~~~p~------------~~~~~~~~~~~~~~~g~~~~l~c~~~~~p--~~~v~ 421 (591)
.+|+|.|.|.+.|..+.. .....|.|..++. +.... .....+..|+.+.|.|.+.+.+ .+.+.
T Consensus 85 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 162 (247)
T 1svz_A 85 AEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQ--SGPELKKPGETVKISCKATNYAFTDYSMH 162 (247)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEE--CCCEEECTTCCEEEEEEEESSCGGGSCEE
T ss_pred HHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeC--CCceeecCCCcEEEEEEEcCcccCCcEEE
Confidence 999999999999976542 3346677766431 11100 1123478999999999999875 57999
Q ss_pred EeeCC--eEee-----------------eccceEEEe--cCCeeEEEEeccCCCcceeEEEEEEcC
Q psy12425 422 WYRDN--EVIE-----------------SGGHFHVET--SERHAILTIRDASNVDTAPYRVVAEND 466 (591)
Q Consensus 422 W~~~~--~~~~-----------------~~~~~~~~~--~~~~~~l~i~~~~~~~~g~y~c~a~n~ 466 (591)
|++++ .... ...++.+.. ......|.|.+++.+|+|.|.|.|.|.
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99963 2110 023444443 345679999999999999999999995
No 237
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.75 E-value=1.2e-16 Score=136.95 Aligned_cols=186 Identities=20% Similarity=0.321 Sum_probs=141.8
Q ss_pred CCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCC-CceEEEEee------------cCcceEEEcCCcCC
Q psy12425 90 GPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM-PHWICISTT------------CHDTTFIVQGLTEG 156 (591)
Q Consensus 90 ~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~-~~~~~~~~~------------~~~~~~~i~~l~~~ 156 (591)
.+|.. +.+......++.|+|.+|...+ ..+..|.|+++..+. ..|..+... .....+.+.+|.++
T Consensus 3 ~pP~~-~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 80 (214)
T 2ibg_A 3 YPPTP-PNVTRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 80 (214)
T ss_dssp CCCCC-CEEEEEETTEEEEEEEEECCSS-CCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred CCCCC-CEeeEecCCEEEEEEECCCCCC-CCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCC
Confidence 44555 3566778899999999888554 589999999988654 667665421 34567899999999
Q ss_pred cEEEEEEEEEccCCCCCCCCccCccccc--CCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCC-
Q psy12425 157 QEYLFHVMAVNENGMGPPLEGINPIKAK--SPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGS- 233 (591)
Q Consensus 157 ~~y~~~~~a~n~~g~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~- 233 (591)
+.|.|+|.|.|..|.+..+.....+... .+..+|.+|..+.+.....+++.|+|.++....+..+.+|.|.++..+.
T Consensus 81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~ 160 (214)
T 2ibg_A 81 HTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSA 160 (214)
T ss_dssp CEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCC
T ss_pred CEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCC
Confidence 9999999999999887665533322221 2333455566677777788899999999864455689999999998776
Q ss_pred CccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCC
Q psy12425 234 DAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 277 (591)
Q Consensus 234 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~ 277 (591)
..|............++|.+|.++..|.|+++|.|..|.+..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 204 (214)
T 2ibg_A 161 GEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSA 204 (214)
T ss_dssp SCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCC
T ss_pred cceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcc
Confidence 67887766554567899999999999999999999999877553
No 238
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.75 E-value=1.1e-16 Score=136.86 Aligned_cols=81 Identities=23% Similarity=0.371 Sum_probs=63.4
Q ss_pred eeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eeeeEEEE
Q psy12425 304 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKAELII 382 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~~l~v 382 (591)
+..|+.+.|.|.+.+.| +.+.|++++..+....++.+...+ .+|.|.++..+|.|.|+|.|.|..|.. +..+.|.|
T Consensus 122 ~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v 198 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNN--SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDI 198 (208)
T ss_dssp CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETTT--TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECC
T ss_pred EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCCC--CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeE
Confidence 45677788999998876 799999999998877777665443 379999999999999999999999987 44567777
Q ss_pred ecCCc
Q psy12425 383 MTAPK 387 (591)
Q Consensus 383 ~~~p~ 387 (591)
..+|.
T Consensus 199 ~~~~~ 203 (208)
T 3r4d_A 199 IFDPH 203 (208)
T ss_dssp C----
T ss_pred EeCCc
Confidence 66553
No 239
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.75 E-value=2.4e-17 Score=124.69 Aligned_cols=95 Identities=22% Similarity=0.363 Sum_probs=88.0
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|++..+....++.+.......+|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 14 ~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~ 93 (114)
T 2cqv_A 14 PEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQV 93 (114)
T ss_dssp CCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCE
T ss_pred CCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEE
Confidence 67889999999999999999999999999999999888888888777788999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCc
Q psy12425 82 TINITGLPGPPIGPL 96 (591)
Q Consensus 82 ~l~v~~~p~~p~~~~ 96 (591)
.|.|...|.+|..+.
T Consensus 94 ~l~V~~~p~~P~~p~ 108 (114)
T 2cqv_A 94 NLTVVDKPDPPAGTP 108 (114)
T ss_dssp EEEEECSCSCCCCCT
T ss_pred EEEEECCCCCCCCCc
Confidence 999999999888764
No 240
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.75 E-value=4.9e-17 Score=140.00 Aligned_cols=173 Identities=16% Similarity=0.215 Sum_probs=116.0
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccCC-----------------CCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REIT-----------------PSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
....+.+|+.+.|.|.+.+.+ .+.+.|+++. ..+. ...++.+..+ +...+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (219)
T 1c1e_H 8 GPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLK 87 (219)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCC
Confidence 445688999999999999875 6899999863 2211 1235555443 345689999999
Q ss_pred cccceEEEEEEEeCCcc----eeeeeEEEEecC----CcccCCCCcccceeecCCCeEEEEEeeec-cCCC-eEEEeeCC
Q psy12425 357 GVDADEYVCRAVNKGGV----KSTKAELIIMTA----PKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKP-KITWYRDN 426 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~----~~~~~~l~v~~~----p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~~ 426 (591)
.+|+|.|+|.+.|..+. ......|.|... |.+...+ ....+..|+.+.|.|.+.| .|.| .|.|++++
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~---~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 164 (219)
T 1c1e_H 88 NEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLA---PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 164 (219)
T ss_dssp GGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEEC---CCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred cccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEec---CccccccCCeEEEEEEcccccCCCeEEEEEeCC
Confidence 99999999999998742 223466777653 3332111 1123467999999999998 8998 99999998
Q ss_pred eEeeeccceEEEecC---CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEE
Q psy12425 427 EVIESGGHFHVETSE---RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKI 476 (591)
Q Consensus 427 ~~~~~~~~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~ 476 (591)
..+...........+ ....|.|..... |.|.|+|.|.|..|.......+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 165 LSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp BCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEEEC
T ss_pred cccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEEec
Confidence 764211111111111 134688855444 5599999999998875444433
No 241
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.75 E-value=2.8e-17 Score=140.15 Aligned_cols=186 Identities=27% Similarity=0.371 Sum_probs=138.8
Q ss_pred CCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeee---cCCceeeecCcccCCcEEEEE
Q psy12425 188 DKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAI---CAPSQINIPNLIEGRQYEFRV 264 (591)
Q Consensus 188 ~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~l~~~~~~~y~c 264 (591)
.+|.+|..+.+..... ++.|+|.+|...++..+.+|.|+++..+...|....... .....+.+.+|.+++.|.|+|
T Consensus 7 ~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 85 (209)
T 2vkw_A 7 DTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRL 85 (209)
T ss_dssp CCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEEE
T ss_pred CCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEEE
Confidence 4677777777776666 689999998766777799999999988888887765432 124588999999999999999
Q ss_pred EEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEe
Q psy12425 265 YAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAE 344 (591)
Q Consensus 265 ~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~ 344 (591)
.|.|..|.+..+.. +.+.
T Consensus 86 ~A~n~~G~~~~s~~---~~~~----------------------------------------------------------- 103 (209)
T 2vkw_A 86 AALNGKGLGEISAA---SEFK----------------------------------------------------------- 103 (209)
T ss_dssp EEEETTEECCCCCC---EEEE-----------------------------------------------------------
T ss_pred EEEcCCcccCCccc---cccc-----------------------------------------------------------
Confidence 99998876542210 0000
Q ss_pred CCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEee
Q psy12425 345 GDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYR 424 (591)
Q Consensus 345 ~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~ 424 (591)
.. +
T Consensus 104 ---------------------------------------T~------~-------------------------------- 106 (209)
T 2vkw_A 104 ---------------------------------------TQ------P-------------------------------- 106 (209)
T ss_dssp ---------------------------------------CC------C--------------------------------
T ss_pred ---------------------------------------cc------C--------------------------------
Confidence 00 0
Q ss_pred CCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCCCeeeeecCCeeEEEeec
Q psy12425 425 DNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRA 504 (591)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~ 504 (591)
..+|.+|..+.+...+.+++.|+|.+
T Consensus 107 ------------------------------------------------------~~~P~~P~~~~~~~~~~~sv~l~W~~ 132 (209)
T 2vkw_A 107 ------------------------------------------------------VREPSAPKLEGQMGEDGNSIKVNLIK 132 (209)
T ss_dssp ------------------------------------------------------SCSCCCCEEEEEECTTSSCEEEEEEC
T ss_pred ------------------------------------------------------CCCCCCCcccccccccCCeEEEEEEC
Confidence 01455666566666788899999998
Q ss_pred cccCCCcceeeEEEEeeeCCCCceEEe--ceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCc
Q psy12425 505 PIWDGGSNITNYIVEKREHPMSSWIRV--GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 569 (591)
Q Consensus 505 p~~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~ 569 (591)
| .++++.+.+|.|+|+. ....|... .......+.|.+|.+++.|.|+|+|.|..|.|++|...
T Consensus 133 p-~~~~~~i~~Y~v~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~ 197 (209)
T 2vkw_A 133 Q-DDGGSPIRHYLVRYRA-LSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFV 197 (209)
T ss_dssp C-CCTTSCCCEEEEEEEE-TTSCCCCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEE
T ss_pred c-ccCCCCCceEEEEEEC-CCCCCceeeecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhh
Confidence 8 4566799999999998 44556432 23345789999999999999999999999999998764
No 242
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=1e-16 Score=139.88 Aligned_cols=184 Identities=13% Similarity=0.094 Sum_probs=126.9
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceE-EEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHH-IFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
.+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|++..+....... .........|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 4677766554 56889999999999975 467899999887543110000 00011234799999999999999999987
Q ss_pred CCc-----ceeeeeEEEEecC---CcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEe-c
Q psy12425 370 KGG-----VKSTKAELIIMTA---PKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET-S 440 (591)
Q Consensus 370 ~~g-----~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~ 440 (591)
..+ ..+....|.|... |.+...+. ..+.+|+.++|.|.+.+.+ +.+.|+|+|..+.......... .
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~----~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~ 158 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLYEKPSLSAQPG----PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNG 158 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSSCCCEEECSSC----TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSS
T ss_pred cCCCccccccCCCEEEecccCCCCcceEccCC----CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCC
Confidence 532 1244567777653 34433332 2468899999999998764 7999999998765433222111 1
Q ss_pred CCeeEEEEeccCCCcceeEEEEEEcCCC-----ccceEEEEEecCCCC
Q psy12425 441 ERHAILTIRDASNVDTAPYRVVAENDLG-----MDSAIVKIQISDRPD 483 (591)
Q Consensus 441 ~~~~~l~i~~~~~~~~g~y~c~a~n~~g-----~~~~~~~~~v~~~p~ 483 (591)
.....|.|.+++ |+|.|+|.|.|..+ ..+..+.|.|..+|.
T Consensus 159 ~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 159 TFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp CCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred ceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 246889999998 99999999997632 235677888887664
No 243
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.75 E-value=3.8e-17 Score=140.32 Aligned_cols=167 Identities=13% Similarity=0.189 Sum_probs=116.1
Q ss_pred ccccceeccccEEEEEEEcCC-------CCCeeEEecCCccC-----------------CCCCceEEEEe--CCeEEEEE
Q psy12425 299 LRNANAIQNHNAQFQCTITGC-------PKPTISWLKGSREI-----------------TPSARHHIFAE--GDTYTLII 352 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~-------p~~~v~W~~~~~~~-----------------~~~~~~~~~~~--~~~~~l~i 352 (591)
+..+.+.+|+.+.|.|.+.+. +.+.+.|++++... ....++.+..+ ....+|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 345678899999999999754 57789999975421 11134443321 23457999
Q ss_pred cceecccceEEEEEEEeCCcce----eeeeEEEEecCC---cccCCCCcccceeecCCCeEEEEEeeecc----CCCeEE
Q psy12425 353 NSVYGVDADEYVCRAVNKGGVK----STKAELIIMTAP---KFNVPPRFRDTAYFDKGENVVVKIPFTGY----PKPKIT 421 (591)
Q Consensus 353 ~~~~~~d~g~y~c~a~n~~g~~----~~~~~l~v~~~p---~~~~~~~~~~~~~~~~g~~~~l~c~~~~~----p~~~v~ 421 (591)
.+++.+|+|.|.|.+.+..+.. ...+.|.|...+ .+..+ ..+.+|+.+.|.|.+.+. |.|.+.
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~------~~~~~G~~v~L~C~~~~~~~~~p~p~v~ 160 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFL------EPLESGRPTRLSCSLPGSCEAGPPLTFS 160 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--------CCCCTTCCEEEEEECTTCCSCSSCCEEE
T ss_pred ccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecC------ccccCCCeEEEEEEeccCCCCCCCceEE
Confidence 9999999999999999976432 246778887643 33221 125689999999999774 889999
Q ss_pred EeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEE
Q psy12425 422 WYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 422 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
|++++...... . ......|.|..+..+|.|.|+|.|.|..+..+....+.
T Consensus 161 W~~~~~~~~~~-~-----~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 161 WTGNALSPLDP-E-----TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp EESSTTSSSCS-S-----CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred EeCCCCccCCC-C-----ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 99998653211 1 13567899999999999999999999876554444433
No 244
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.74 E-value=4.6e-17 Score=143.62 Aligned_cols=172 Identities=18% Similarity=0.275 Sum_probs=118.6
Q ss_pred eEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCc--cC-------------CCCCceEEE--EeCCeEEEEEccee
Q psy12425 294 EIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSR--EI-------------TPSARHHIF--AEGDTYTLIINSVY 356 (591)
Q Consensus 294 ~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~--~~-------------~~~~~~~~~--~~~~~~~l~i~~~~ 356 (591)
.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++... .. ....++.+. ......+|.|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 34444556778999999999999999999999988321 10 012234442 23456789999999
Q ss_pred cccceEEEEEEEeCCcce----eeeeEEEEec--------------------CCcccCCCCcccceeecCCCeEEEEEee
Q psy12425 357 GVDADEYVCRAVNKGGVK----STKAELIIMT--------------------APKFNVPPRFRDTAYFDKGENVVVKIPF 412 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~~----~~~~~l~v~~--------------------~p~~~~~~~~~~~~~~~~g~~~~l~c~~ 412 (591)
.+|+|.|+|.+.|..+.. .....|.|.. +|.+...+ ....+..|+.++|.|.+
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p---~~~~v~~G~~v~L~C~~ 161 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSP---RNKVTVTGENVTLSCRQ 161 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESC---SEEEEETTCCEEECEEE
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecC---CEEEEeCCCcEEEEEEc
Confidence 999999999999976522 2345666664 22333222 23456789999999999
Q ss_pred eccCCCeEEEeeCC--eEee---------------eccceEEEe-cCCeeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 413 TGYPKPKITWYRDN--EVIE---------------SGGHFHVET-SERHAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 413 ~~~p~~~v~W~~~~--~~~~---------------~~~~~~~~~-~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
.+. .+.+.|++.. .... ...++.+.. ......|+|.+++.+|+|.|.|.|.|..|.
T Consensus 162 ~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 162 TNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp CSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred CCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 887 7899999832 1110 012222222 234568999999999999999999998764
No 245
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.74 E-value=4.8e-16 Score=132.03 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=73.0
Q ss_pred CCCCCCCeeeeecCCeeEEEeecccc-CCCcceeeEEEEeeeCCCCc-eEEe--ceeeeeEEEEcCcccCceEEEEEEEE
Q psy12425 482 PDPPQFPTVEDIGHDSLALVWRAPIW-DGGSNITNYIVEKREHPMSS-WIRV--GNTRFTTMAITGLSPGHQYEFRVYAE 557 (591)
Q Consensus 482 p~~p~~~~~~~~~~~~v~l~W~~p~~-~~~~~~~~y~v~~~~~~~~~-~~~~--~~~~~~~~~i~~l~~~~~Y~~~v~A~ 557 (591)
+.+|.++.+...+.+++.|+|++|.. +.++.+.+|.|+|+...... |... .......+.|.+|.+++.|.|+|+|.
T Consensus 105 ~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 184 (205)
T 1cfb_A 105 FKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAI 184 (205)
T ss_dssp SCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEEEEE
T ss_pred CCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEEecCCCccEEEEcCCCCCcEEEEEEEEE
Confidence 45677888888888999999998762 33447999999998876544 7654 23356899999999999999999999
Q ss_pred cCCcCCCC-CCCcceEEecc
Q psy12425 558 NVYGRSDP-STTSDLITTYG 576 (591)
Q Consensus 558 n~~G~~~~-s~~~~~~~t~~ 576 (591)
|..|.|+. |... .++|.+
T Consensus 185 n~~G~g~~ss~~v-~~~T~e 203 (205)
T 1cfb_A 185 NDRGESNVAAEEV-VGYSGE 203 (205)
T ss_dssp ETTEECSSCCCCE-EEESSS
T ss_pred cCCCcCCCCCCcE-EEecCC
Confidence 99999995 4543 445543
No 246
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.74 E-value=3e-17 Score=144.60 Aligned_cols=175 Identities=15% Similarity=0.182 Sum_probs=121.4
Q ss_pred CeEEeeccccceeccccEEEEEEEcCCC-----CCeeEEecCCc--cC------------CCCCceEEEEeCCeEEEEEc
Q psy12425 293 PEIIVPLRNANAIQNHNAQFQCTITGCP-----KPTISWLKGSR--EI------------TPSARHHIFAEGDTYTLIIN 353 (591)
Q Consensus 293 p~~~~~~~~~~~~~g~~~~l~c~~~~~p-----~~~v~W~~~~~--~~------------~~~~~~~~~~~~~~~~l~i~ 353 (591)
+.+...+..+.+.+|+.+.|.|.+.+.+ .+.+.|++++. .. ....++.+...+...+|.|.
T Consensus 35 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 114 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRIS 114 (252)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred cEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEEC
Confidence 3344445667789999999999999987 68999998542 11 11346666666777899999
Q ss_pred ceecccceEEEEEEEeCCcce-eeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEeeCCe
Q psy12425 354 SVYGVDADEYVCRAVNKGGVK-STKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRDNE 427 (591)
Q Consensus 354 ~~~~~d~g~y~c~a~n~~g~~-~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~~~ 427 (591)
+++.+|+|.|+|.+.|..+.. .....+.|.. +|.+...+. ...+..|+.+.|.|.+.+. |.+ .+.|+++|.
T Consensus 115 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~---~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 191 (252)
T 3bkj_L 115 RVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPP---SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 191 (252)
T ss_dssp SCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECC---CHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred CCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCC---ChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCe
Confidence 999999999999999876533 2334566654 233332111 1112368899999999984 543 799999998
Q ss_pred EeeeccceE--EEecC-----CeeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 428 VIESGGHFH--VETSE-----RHAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 428 ~~~~~~~~~--~~~~~-----~~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
.+....... ..... ....|.|..+..+|.|.|+|.|.|.....
T Consensus 192 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 192 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp EECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred ecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 875431111 11111 13568999999999999999999986543
No 247
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.74 E-value=2.4e-17 Score=138.09 Aligned_cols=159 Identities=16% Similarity=0.216 Sum_probs=110.9
Q ss_pred cccceeccccEEEEEEEcC-CCCCeeEEecCCccCC---CC---------------CceEEEEeCCeEEEEEcceecccc
Q psy12425 300 RNANAIQNHNAQFQCTITG-CPKPTISWLKGSREIT---PS---------------ARHHIFAEGDTYTLIINSVYGVDA 360 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~-~p~~~v~W~~~~~~~~---~~---------------~~~~~~~~~~~~~l~i~~~~~~d~ 360 (591)
..+.+.+|+.+.|.|.+.+ .+.+.+.|++++..+. .. .+..+. ...+|.|.+++.+|+
T Consensus 6 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~D~ 82 (193)
T 2if7_A 6 LMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKMEDT 82 (193)
T ss_dssp EEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGGGC
T ss_pred eEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCcccC
Confidence 4456789999999999875 4557999999865331 00 122222 234799999999999
Q ss_pred eEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCC-eEEEEEeeecc-CCCeEEEeeCCeEeeeccceEEE
Q psy12425 361 DEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGE-NVVVKIPFTGY-PKPKITWYRDNEVIESGGHFHVE 438 (591)
Q Consensus 361 g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~-~~~l~c~~~~~-p~~~v~W~~~~~~~~~~~~~~~~ 438 (591)
|.|+|.+.|..|.....+.|.|..++..+.-. ........|. .+.|.|.+.+. |.|.+.|+++|..+..
T Consensus 83 G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~--~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~------- 153 (193)
T 2if7_A 83 GSYRAQISTKTSAKLSSYTLRILRQLRNIQVT--NHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS------- 153 (193)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCEEEEEE--ECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES-------
T ss_pred ceEEEEEEecCCCeEEEEEEEEEccCCCCeEe--cCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC-------
Confidence 99999999998877667788887654321000 0001123455 89999999985 5899999999876532
Q ss_pred ecCCeeEEEEeccCCC-cceeEEEEEEcCCCccceEE
Q psy12425 439 TSERHAILTIRDASNV-DTAPYRVVAENDLGMDSAIV 474 (591)
Q Consensus 439 ~~~~~~~l~i~~~~~~-~~g~y~c~a~n~~g~~~~~~ 474 (591)
...|.|.....+ |.|.|+|.|.|..|..+..+
T Consensus 154 ----~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 154 ----QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp ----SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred ----CCeEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 234556443444 89999999999999875543
No 248
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.74 E-value=5.2e-17 Score=134.26 Aligned_cols=76 Identities=12% Similarity=0.184 Sum_probs=59.5
Q ss_pred eeccccEEEEEEE-cCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcc-eeeeeEEE
Q psy12425 304 AIQNHNAQFQCTI-TGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGV-KSTKAELI 381 (591)
Q Consensus 304 ~~~g~~~~l~c~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~-~~~~~~l~ 381 (591)
+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ....|.|.++..+|+|.|+|.|.|..+. .+..+.|.
T Consensus 97 ~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~ 168 (176)
T 1f2q_A 97 VMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY--------ENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNIT 168 (176)
T ss_dssp EETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC--------CSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred eeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec--------CCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEE
Confidence 5678889999999 467778999999988774321 1237999999999999999999997444 45567888
Q ss_pred EecCCc
Q psy12425 382 IMTAPK 387 (591)
Q Consensus 382 v~~~p~ 387 (591)
|..+|.
T Consensus 169 V~~~p~ 174 (176)
T 1f2q_A 169 VIKAPR 174 (176)
T ss_dssp EECSCC
T ss_pred EecCCC
Confidence 887764
No 249
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.74 E-value=1.2e-17 Score=141.73 Aligned_cols=171 Identities=12% Similarity=0.184 Sum_probs=116.6
Q ss_pred ccceeccccEEEEEEEcC----CCCCeeEEecCCccCCC------------CCceEEEEeCCeEEEEEcceecccceEEE
Q psy12425 301 NANAIQNHNAQFQCTITG----CPKPTISWLKGSREITP------------SARHHIFAEGDTYTLIINSVYGVDADEYV 364 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~----~p~~~v~W~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 364 (591)
.+.+..|+.+.|.|.+.+ .|.+.+.|++++..+.. ..+..+ ...+..+|.|.+++.+|+|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~-~~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIF-DITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEE-ESTTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEE-ccCCCcEEEEecccchhCeEEE
Confidence 355789999999999853 46688999998765420 011222 1123348999999999999999
Q ss_pred EEEEeCCccee-----eeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeee-ccCCCeEEEeeCCeEeeeccceEEE
Q psy12425 365 CRAVNKGGVKS-----TKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFT-GYPKPKITWYRDNEVIESGGHFHVE 438 (591)
Q Consensus 365 c~a~n~~g~~~-----~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~-~~p~~~v~W~~~~~~~~~~~~~~~~ 438 (591)
|.|.|..|... ....|.|..++. .|.. .......|+.+.|.|.+. |.|.|.|.|+++|..+.........
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~---~p~~-~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~ 157 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFP---TPSI-SDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQ 157 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCC---CCEE-EEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEE
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCC---CCce-EeccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEe
Confidence 99999876553 356666665422 1111 111225588999999995 9999999999999888654332222
Q ss_pred ecC-Ce-eEEEEeccCCCcceeEEEEEEcCCCccceEEEE
Q psy12425 439 TSE-RH-AILTIRDASNVDTAPYRVVAENDLGMDSAIVKI 476 (591)
Q Consensus 439 ~~~-~~-~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~ 476 (591)
... .. ....+..+...|.|.|+|.|.|..|..+..+.+
T Consensus 158 ~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 158 DPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp CTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred cCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 211 21 222345566789999999999999987766654
No 250
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.74 E-value=6e-17 Score=139.77 Aligned_cols=182 Identities=14% Similarity=0.168 Sum_probs=118.7
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccCC-----------------CCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REIT-----------------PSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
....+.+|+.+.|.|.+.+.+ .+.+.|+++. .... ...++.+..+ ++..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (227)
T 1mju_H 8 GAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLT 87 (227)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCC
Confidence 345678999999999999877 6889999853 2110 0235555543 356799999999
Q ss_pred cccceEEEEEEEeCCcce-eeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEeeCCeEe
Q psy12425 357 GVDADEYVCRAVNKGGVK-STKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRDNEVI 429 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~~-~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~~~~~ 429 (591)
.+|+|.|.|.+.|..+.. .....|.|.. +|.+..... ...+..|+.+.|.|.+.|. |.+ .+.|++++..+
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~---~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 88 SDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAP---VCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECC---CC------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred cccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecC---CccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 999999999999864322 2345677764 233221110 1134579999999999985 776 99999998764
Q ss_pred eeccceEEEecC---CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCC
Q psy12425 430 ESGGHFHVETSE---RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 485 (591)
Q Consensus 430 ~~~~~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p 485 (591)
.......+...+ ..+.|.|.....+| |.|+|.|.|..+.......+.+..+|.+|
T Consensus 165 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~ 222 (227)
T 1mju_H 165 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKP 222 (227)
T ss_dssp TEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC----
T ss_pred CcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCC
Confidence 211100111111 24578998888888 99999999988777777777777777654
No 251
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.74 E-value=1e-16 Score=141.66 Aligned_cols=167 Identities=14% Similarity=0.268 Sum_probs=117.5
Q ss_pred ccceeccccEEEEEEEcCC--CCCeeEEecCCc--cC------------CCCCceEEEEeCCeEEEEEcceecccceEEE
Q psy12425 301 NANAIQNHNAQFQCTITGC--PKPTISWLKGSR--EI------------TPSARHHIFAEGDTYTLIINSVYGVDADEYV 364 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~~~--~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 364 (591)
...+.+|+.+.|.|.+.+. +.+.+.|++... .. ....++.+...+...+|.|.+++.+|+|.|+
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 90 (256)
T 3ux9_B 11 SVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYY 90 (256)
T ss_dssp EEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred cEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEE
Confidence 3567899999999999887 788999998421 11 1234666666777789999999999999999
Q ss_pred EEEEeCCcc---eeeeeEEEEecCCcccC---------------CCC--cccceeecCCCeEEEEEeeeccC--CCeEEE
Q psy12425 365 CRAVNKGGV---KSTKAELIIMTAPKFNV---------------PPR--FRDTAYFDKGENVVVKIPFTGYP--KPKITW 422 (591)
Q Consensus 365 c~a~n~~g~---~~~~~~l~v~~~p~~~~---------------~~~--~~~~~~~~~g~~~~l~c~~~~~p--~~~v~W 422 (591)
|.+.|..+. ......|.|..++.... .+. ......+.+|+.+.|.|.+.+.+ .+.+.|
T Consensus 91 C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W 170 (256)
T 3ux9_B 91 CQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMSW 170 (256)
T ss_dssp EEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEE
T ss_pred EEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEEE
Confidence 999997553 23446777776542110 000 01123478899999999999877 789999
Q ss_pred eeC--CeEee-----------------eccceEEEec--CCeeEEEEeccCCCcceeEEEEEEcCC
Q psy12425 423 YRD--NEVIE-----------------SGGHFHVETS--ERHAILTIRDASNVDTAPYRVVAENDL 467 (591)
Q Consensus 423 ~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~~~g~y~c~a~n~~ 467 (591)
+++ +..+. ...++.+... .....|+|.+++.+|+|.|.|.|.|..
T Consensus 171 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 171 VRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 986 32221 1124444433 346679999999999999999999964
No 252
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.74 E-value=1e-16 Score=138.21 Aligned_cols=173 Identities=15% Similarity=0.220 Sum_probs=118.5
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccC-------------------CCCCceEEEEe--CCeEEEEEcc
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REI-------------------TPSARHHIFAE--GDTYTLIINS 354 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~-------------------~~~~~~~~~~~--~~~~~l~i~~ 354 (591)
....+.+|+.+.|.|.+.+.+ .+.+.|+++. ... ....++.+..+ ....+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 8 GGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 345688999999999999865 6789998843 110 01235555543 3467899999
Q ss_pred eecccceEEEEEEEeCCc-----ceeeeeEEEEecC----CcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEe
Q psy12425 355 VYGVDADEYVCRAVNKGG-----VKSTKAELIIMTA----PKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWY 423 (591)
Q Consensus 355 ~~~~d~g~y~c~a~n~~g-----~~~~~~~l~v~~~----p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~ 423 (591)
++..|+|.|.|.+.|..| .......|.|... |.+...+. ...+..|+.+.|.|.+.|. |.| .+.|+
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~---~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 164 (222)
T 1q9r_B 88 LRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAP---GSAAQTNSMVTLGCLVKGYFPEPVTVTWN 164 (222)
T ss_dssp CCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECC---CSCCCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred CCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccc---cccccCCCcEEEEEEEccEECCCCEEEEe
Confidence 999999999999999765 2223456777642 33221111 1124579999999999986 888 99999
Q ss_pred eCCeEeeeccceEEEecC---CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEE
Q psy12425 424 RDNEVIESGGHFHVETSE---RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKI 476 (591)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~ 476 (591)
++|..+...........+ ..+.|.|..+...| |.|+|.|.|..|.......+
T Consensus 165 ~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 165 SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp GGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred cCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 998765321111111111 13568999999889 99999999999876544433
No 253
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.74 E-value=3.6e-18 Score=144.22 Aligned_cols=153 Identities=14% Similarity=0.242 Sum_probs=108.3
Q ss_pred eeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEe
Q psy12425 304 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 383 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 383 (591)
+.+|+.+.|.|.+ |.+.+.|++++..+... .....+|.|.+++.+|+|.|+|.+.+.. +....+.+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~---s~~~~v~v~ 81 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNK---SKPLQVYYR 81 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSC---CCCEEEEEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCC---CeeEEEEEE
Confidence 4689999999998 78899999998765421 1223379999999999999999975422 222444444
Q ss_pred c-------------------------------CCcccCCCCcccceeec-CCCeEEEEEeeeccCCCeEEEeeCCeEeee
Q psy12425 384 T-------------------------------APKFNVPPRFRDTAYFD-KGENVVVKIPFTGYPKPKITWYRDNEVIES 431 (591)
Q Consensus 384 ~-------------------------------~p~~~~~~~~~~~~~~~-~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~ 431 (591)
. ++.+... ...+. +|+.+.|.|. +.|.|.+.|++++..+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~ 154 (204)
T 1sy6_A 82 MGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQT-----PYKVSISGTTVILTCP--QYPGSEILWQHNDKNIGG 154 (204)
T ss_dssp C------------------------------------CC-----CCEEEEETTEEEEECS--CCCSSCEEEEETTEEESC
T ss_pred EeccccccccccccccccccccccccccccccccceecC-----CceeeecCCcEEEEcC--CCCCCceEEEECCEECCC
Confidence 1 1111111 11233 8999999999 889999999999988754
Q ss_pred cc-ceEEEecCCeeEEEEecc-CCCcceeEEEEEEcCCCcc-ceEEEEEe
Q psy12425 432 GG-HFHVETSERHAILTIRDA-SNVDTAPYRVVAENDLGMD-SAIVKIQI 478 (591)
Q Consensus 432 ~~-~~~~~~~~~~~~l~i~~~-~~~~~g~y~c~a~n~~g~~-~~~~~~~v 478 (591)
.. ...+.. ....|.|.++ ...|+|.|+|.|.|..|.. +..+.|.+
T Consensus 155 ~~~~~~~~~--~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 155 DEDDKNIGS--DEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp CTTCTTEEE--ETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred ccCCceEec--CCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 32 111221 2678999999 9999999999999999974 55555554
No 254
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.73 E-value=2.6e-16 Score=139.13 Aligned_cols=173 Identities=17% Similarity=0.239 Sum_probs=123.8
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCC------CCeeEEecCC--ccC------------CCCCceEEEEeCCeEEEE
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCP------KPTISWLKGS--REI------------TPSARHHIFAEGDTYTLI 351 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p------~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~ 351 (591)
.+.+...+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. ... ....++.+...+...+|.
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 34555566677889999999999999887 6889999842 211 013466666666678999
Q ss_pred EcceecccceEEEEEEEeCCcce-eeeeEEEEecCCc------------------ccCCCCcccceeecCCCeEEEEEee
Q psy12425 352 INSVYGVDADEYVCRAVNKGGVK-STKAELIIMTAPK------------------FNVPPRFRDTAYFDKGENVVVKIPF 412 (591)
Q Consensus 352 i~~~~~~d~g~y~c~a~n~~g~~-~~~~~l~v~~~p~------------------~~~~~~~~~~~~~~~g~~~~l~c~~ 412 (591)
|.+++.+|+|.|.|.+.|..+.. .....|.|..+|. +.... .....+..|+.+.|.|.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~ 162 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQ--SGPEVVKTGASVKISCKA 162 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEE--CCCEEECTTCCEEEEEEE
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeC--CCCEEEcCCCcEEEEEEE
Confidence 99999999999999999876532 3346777876541 11100 112357899999999999
Q ss_pred eccCC--CeEEEeeCC--eE---eee--------------ccceEEEe--cCCeeEEEEeccCCCcceeEEEEEEcC
Q psy12425 413 TGYPK--PKITWYRDN--EV---IES--------------GGHFHVET--SERHAILTIRDASNVDTAPYRVVAEND 466 (591)
Q Consensus 413 ~~~p~--~~v~W~~~~--~~---~~~--------------~~~~~~~~--~~~~~~l~i~~~~~~~~g~y~c~a~n~ 466 (591)
.+.+. +.+.|+++. .. +.. ..++.+.. ......|+|.+++.+|+|.|.|.|.|.
T Consensus 163 ~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 163 SGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp ESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred eCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 98874 799999863 21 110 22344432 235679999999999999999999996
No 255
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.73 E-value=2.3e-17 Score=121.89 Aligned_cols=96 Identities=27% Similarity=0.539 Sum_probs=88.8
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.||.|...+.++.+.+|+.+.|.|.+.|.|.|.|.|++++..+..+.++.+..++..++|.|.++..+|+|.|+|.|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 57889988899999999999999999999999999999999999888999888888999999999999999999999999
Q ss_pred CcceeeeeEEEEecCC
Q psy12425 371 GGVKSTKAELIIMTAP 386 (591)
Q Consensus 371 ~g~~~~~~~l~v~~~p 386 (591)
.|.....+.|.|..+|
T Consensus 92 ~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 92 AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TEEEEEEEEEEEEC--
T ss_pred CCEEEEEEEEEEEcCC
Confidence 9999999999998765
No 256
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.73 E-value=1.1e-16 Score=140.73 Aligned_cols=175 Identities=14% Similarity=0.141 Sum_probs=116.1
Q ss_pred cccceeccccEEEEEEEcCCCCCe-----eEEecCCccCCCCC--------ce-------EEE---EeCCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCPKPT-----ISWLKGSREITPSA--------RH-------HIF---AEGDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p~~~-----v~W~~~~~~~~~~~--------~~-------~~~---~~~~~~~l~i~~~~ 356 (591)
..+.+..|+.+.|.|.+.+.|.+. +.|++++....... .. .+. ......+|.|.+++
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~ 90 (248)
T 3pv7_A 11 GTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQ 90 (248)
T ss_dssp SEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCC
T ss_pred CCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCC
Confidence 345678999999999998887765 99998643322100 00 000 01123359999999
Q ss_pred cccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeec-cCCC-eEEEeeCCeEeeecc-
Q psy12425 357 GVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKP-KITWYRDNEVIESGG- 433 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~~~~~~~~~- 433 (591)
..|+|.|+|.+.|..+.......|.|..+|.+...+. ..+..|..+.|.|.+.| .|.+ .+.|+++|..+....
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~----~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~ 166 (248)
T 3pv7_A 91 LEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD----QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIE 166 (248)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC------------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEE
T ss_pred HHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecC----CccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccc
Confidence 9999999999999988888888999998887654432 22345778889999998 7988 999999986432110
Q ss_pred -----c-eEEEecC-----CeeEEEEeccCCCcceeEEEEEEcCCCccce--EEEEEe
Q psy12425 434 -----H-FHVETSE-----RHAILTIRDASNVDTAPYRVVAENDLGMDSA--IVKIQI 478 (591)
Q Consensus 434 -----~-~~~~~~~-----~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~--~~~~~v 478 (591)
. ....... ....|.|.....+|.|.|+|.|.|..+.... .+.|.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 167 ISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp ECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred cccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 0 0111111 1356888888899999999999999987544 444555
No 257
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.73 E-value=3.3e-16 Score=152.83 Aligned_cols=97 Identities=31% Similarity=0.567 Sum_probs=85.2
Q ss_pred EecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEEEE
Q psy12425 85 ITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVM 164 (591)
Q Consensus 85 v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~ 164 (591)
....|.+|..| .+.++..++++|+|.+|.+++|.+|++|.|+++..+...|..+.. ...+.+++.+|.++..|.|||+
T Consensus 6 ~~~~P~pP~~P-~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~-~~~t~~~V~~L~~g~~Y~FRV~ 83 (573)
T 3uto_A 6 DVPEPEPPRFP-IIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAK-SRYTYTTIEGLRAGKQYEFRII 83 (573)
T ss_dssp --CCCCCCEEE-EEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEE-ESSSEEEECCCCTTCEEEEEEE
T ss_pred cCCCCccCCCC-EEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEecc-ccCCEEEeCCCCCCCcEeEEEE
Confidence 34468888775 788999999999999999999999999999999999999999875 4778999999999999999999
Q ss_pred EEccCCCCCCCCccCcccc
Q psy12425 165 AVNENGMGPPLEGINPIKA 183 (591)
Q Consensus 165 a~n~~g~~~~~~~~~~~~~ 183 (591)
|.|..|.+.++..+..+..
T Consensus 84 A~N~~G~s~PS~~s~~v~~ 102 (573)
T 3uto_A 84 AENKHGQSKPCEPTAPVLI 102 (573)
T ss_dssp EEETTEECCCCCCCCCEEC
T ss_pred EEcCceEcCCcCCCCCEEc
Confidence 9999999999877666554
No 258
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.73 E-value=1.4e-15 Score=148.53 Aligned_cols=95 Identities=35% Similarity=0.629 Sum_probs=86.5
Q ss_pred CCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEc
Q psy12425 189 KPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQN 268 (591)
Q Consensus 189 ~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n 268 (591)
.|.+|..+.+.....++++|+|.+|..+++++|++|.|+++..+...|..+... ....+++.+|.++..|.|||+|.|
T Consensus 9 ~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~~--~~t~~~V~~L~~g~~Y~FRV~A~N 86 (573)
T 3uto_A 9 EPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKS--RYTYTTIEGLRAGKQYEFRIIAEN 86 (573)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEEE--SSSEEEECCCCTTCEEEEEEEEEE
T ss_pred CCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeccc--cCCEEEeCCCCCCCcEeEEEEEEc
Confidence 688889999999999999999999999999999999999999999999998753 568899999999999999999999
Q ss_pred CCCCCCCCCCcceEEEc
Q psy12425 269 EAGLSLPSSASNSVQIK 285 (591)
Q Consensus 269 ~~g~~~~s~~~~~~~~~ 285 (591)
..|.+.++..+..+.+.
T Consensus 87 ~~G~s~PS~~s~~v~~~ 103 (573)
T 3uto_A 87 KHGQSKPCEPTAPVLIP 103 (573)
T ss_dssp TTEECCCCCCCCCEECC
T ss_pred CceEcCCcCCCCCEEcC
Confidence 99999988877777654
No 259
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.73 E-value=4.8e-17 Score=142.90 Aligned_cols=175 Identities=13% Similarity=0.195 Sum_probs=119.7
Q ss_pred EEeeccccceeccccEEEEEEEcCCCCCeeEEec----------------CCccCCCC---CceEEEE-eCCeEEEEEcc
Q psy12425 295 IIVPLRNANAIQNHNAQFQCTITGCPKPTISWLK----------------GSREITPS---ARHHIFA-EGDTYTLIINS 354 (591)
Q Consensus 295 ~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~----------------~~~~~~~~---~~~~~~~-~~~~~~l~i~~ 354 (591)
+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++ ++...... .++.+.. .....+|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 3444556778999999999999999999999998 22212111 3555543 34567999999
Q ss_pred eecccceEEEEEEEeCCcc----eeeeeEEEEec------CCcccCCCCcccceeecCCCeEEEEEeeeccCCC--eEEE
Q psy12425 355 VYGVDADEYVCRAVNKGGV----KSTKAELIIMT------APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP--KITW 422 (591)
Q Consensus 355 ~~~~d~g~y~c~a~n~~g~----~~~~~~l~v~~------~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~--~v~W 422 (591)
++.+|+|.|.|.+.|..+. ......|.|.. +|.+.... .....+..|+.+.|.|.+.|.|++ .+.|
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~--~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 161 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFE--PSEAEISHTQKATLVCLATGFYPDHVELSW 161 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEEC--CCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeec--CCchhccCCCcEEEEEEEccCcCCceEEEE
Confidence 9999999999999986542 23445677764 23222111 011224569999999999987665 8999
Q ss_pred eeCCeEeeeccceEEEe-------cCC----eeEEEEeccCCCc-ceeEEEEEEcCCCccc
Q psy12425 423 YRDNEVIESGGHFHVET-------SER----HAILTIRDASNVD-TAPYRVVAENDLGMDS 471 (591)
Q Consensus 423 ~~~~~~~~~~~~~~~~~-------~~~----~~~l~i~~~~~~~-~g~y~c~a~n~~g~~~ 471 (591)
+++|..+.......... .+. ...|.|.....+| .|.|+|.|.|......
T Consensus 162 ~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 162 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 99998886432221100 011 2447888887777 9999999999876654
No 260
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.72 E-value=3.9e-17 Score=134.02 Aligned_cols=154 Identities=16% Similarity=0.229 Sum_probs=111.1
Q ss_pred ccceeccccEEEEEEEc--CCCCCeeEEec--CCccC----------CCCCceEEEEeCCeEEEEEcceecccceEEEEE
Q psy12425 301 NANAIQNHNAQFQCTIT--GCPKPTISWLK--GSREI----------TPSARHHIFAEGDTYTLIINSVYGVDADEYVCR 366 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~--~~p~~~v~W~~--~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~ 366 (591)
.+....|+++.|.|... +.+.+.|.|++ ++..+ ....++.+..++ +|.|.+++.+|+|.|+|.
T Consensus 8 ~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~c~ 84 (182)
T 1hnf_A 8 ETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYKVS 84 (182)
T ss_dssp EEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEEEE
T ss_pred EEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEEEE
Confidence 35578899999999542 34567899999 77655 234566665444 799999999999999999
Q ss_pred EEeCCccee--eeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCee
Q psy12425 367 AVNKGGVKS--TKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHA 444 (591)
Q Consensus 367 a~n~~g~~~--~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 444 (591)
|.|..|... ..+.|.|..+.. .|. .. ..+..+.|.|.+.+.|.+.+.|+++|..+ ... ..
T Consensus 85 ~~n~~g~~~~~~~~~L~V~~~~~---~P~----i~-~~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~~---------~~ 146 (182)
T 1hnf_A 85 IYDTKGKNVLEKIFDLKIQERVS---KPK----IS-WTCINTTLTCEVMNGTDPELNLYQDGKHL-KLS---------QR 146 (182)
T ss_dssp EEETTSCEEEEEEEEEEEECCCC---CCE----EE-EETTTTEEEEECSSCSSCEEEEEESSCEE-EEE---------SS
T ss_pred EEeCCCceeEEEEEEEEEcCcCC---CCE----EE-EccCcEEEEeEccCCCCCEEEEEECCEEC-CCC---------Cc
Confidence 999888763 456677765321 111 11 12346899999999999999999999877 211 12
Q ss_pred EEEEeccCCCcceeEEEEEEcCCCccceEEEE
Q psy12425 445 ILTIRDASNVDTAPYRVVAENDLGMDSAIVKI 476 (591)
Q Consensus 445 ~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~ 476 (591)
.+.+.. ...|.|.|+|.|.|..|..+....+
T Consensus 147 ~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 147 VITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 233332 4789999999999999987766555
No 261
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.72 E-value=4.6e-17 Score=141.89 Aligned_cols=172 Identities=12% Similarity=0.184 Sum_probs=118.5
Q ss_pred ccccceeccccEEEEEEEcCCCC-C-eeEEecCC--ccC------------CCCCceEEEEeCCeEEEEEcceecccceE
Q psy12425 299 LRNANAIQNHNAQFQCTITGCPK-P-TISWLKGS--REI------------TPSARHHIFAEGDTYTLIINSVYGVDADE 362 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~p~-~-~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 362 (591)
+....+.+|+.+.|.|.+.+.+. + .+.|+++. ... ....++.+...+...+|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 45667899999999999988543 4 79998853 211 11245666566677799999999999999
Q ss_pred EEEEEEeCCcc---eeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeeccCC--CeEEEeeCCeEeeecc
Q psy12425 363 YVCRAVNKGGV---KSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK--PKITWYRDNEVIESGG 433 (591)
Q Consensus 363 y~c~a~n~~g~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~--~~v~W~~~~~~~~~~~ 433 (591)
|+|.|.|..+. ......+.|.. +|.+...+ .......|+.+.|.|.+.|.++ +.+.|+++|..+..+.
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~---~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~ 182 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFP---PSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGV 182 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEEC---CCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSE
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccC---CChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCc
Confidence 99999998872 23345555633 23322111 1112235889999999998644 3899999999875432
Q ss_pred ceE-EEe-c----CCeeEEEEeccCCCcceeEEEEEEcCCCccceE
Q psy12425 434 HFH-VET-S----ERHAILTIRDASNVDTAPYRVVAENDLGMDSAI 473 (591)
Q Consensus 434 ~~~-~~~-~----~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~ 473 (591)
... ... . .....|.|.....+|.|.|+|.|.|..+....+
T Consensus 183 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 228 (234)
T 2j6e_L 183 ETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 228 (234)
T ss_dssp EECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEE
T ss_pred cccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEe
Confidence 111 011 1 123578999999999999999999997764443
No 262
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.72 E-value=1.1e-16 Score=138.92 Aligned_cols=174 Identities=11% Similarity=0.141 Sum_probs=116.6
Q ss_pred ccceeccccEEEEEEEcCCCCCe---eEEecCCccCC----------------CCCceEEE-------EeCCeEEEEEcc
Q psy12425 301 NANAIQNHNAQFQCTITGCPKPT---ISWLKGSREIT----------------PSARHHIF-------AEGDTYTLIINS 354 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p~~~---v~W~~~~~~~~----------------~~~~~~~~-------~~~~~~~l~i~~ 354 (591)
++.+..|+.+.|.|.+.+.+.+. |.|+|++..+. ...+.... ......+|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 35578899999999999877764 88999764321 00111111 112234799999
Q ss_pred eecccceEEEEEEEeCCcceee-eeEEEEecCCcccCCCCcccceeecCCCeEEEEEee-eccCCCeEEEeeCCeEeeec
Q psy12425 355 VYGVDADEYVCRAVNKGGVKST-KAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF-TGYPKPKITWYRDNEVIESG 432 (591)
Q Consensus 355 ~~~~d~g~y~c~a~n~~g~~~~-~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~v~W~~~~~~~~~~ 432 (591)
++.+|+|.|+|.|.|..|.... ...+.+..+|.....+ .......+..+.+.|.+ .+.|++.+.|++++..+...
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~ 166 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEA---QEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKD 166 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEE---CCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEE
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecc---cceeecceeeeeeeeeecCCCCCCEEEEEECCccccCC
Confidence 9999999999999998776544 3445555555443222 12233456666666665 57889999999988766543
Q ss_pred cceEEEecCC---eeEEEEeccCCCcceeEEEEEEcCCCccceEEEEE
Q psy12425 433 GHFHVETSER---HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 433 ~~~~~~~~~~---~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
........+. .+.|.|..+..+|+|.|+|.|.|..|.......+.
T Consensus 167 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~ 214 (225)
T 4fmk_A 167 TQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVT 214 (225)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred cceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEE
Confidence 3332222222 35799999999999999999999998875554443
No 263
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.72 E-value=2e-17 Score=142.67 Aligned_cols=180 Identities=18% Similarity=0.198 Sum_probs=124.2
Q ss_pred cccceeccccEEEEEEEcC-CCCCe----eEEecCCccCCC-------------CCceEEEE-----eCCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITG-CPKPT----ISWLKGSREITP-------------SARHHIFA-----EGDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~-~p~~~----v~W~~~~~~~~~-------------~~~~~~~~-----~~~~~~l~i~~~~ 356 (591)
..+.+..|+.+.|.|.+.+ .+.+. +.|++++..... ..+..+.. .....+|.|.+++
T Consensus 7 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 86 (221)
T 3eow_R 7 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLR 86 (221)
T ss_dssp CCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSS
T ss_pred CcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCC
Confidence 3456789999999999944 44444 999998642211 23444433 1234589999999
Q ss_pred cccceEEEEEEEeCC-cceeeeeEEEEecCCcccCCCCcccceeecCCCeE-EEEEeee-ccCCCeEEEeeCCeEeeecc
Q psy12425 357 GVDADEYVCRAVNKG-GVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENV-VVKIPFT-GYPKPKITWYRDNEVIESGG 433 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~-g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~-~l~c~~~-~~p~~~v~W~~~~~~~~~~~ 433 (591)
.+|+|.|+|.+.+.. |.....+.|.|..+|.+...+.. .. ..|+.+ .|.|.+. +.|.|.+.|++++.......
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~---~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~ 162 (221)
T 3eow_R 87 VEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQK---VQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTS 162 (221)
T ss_dssp CCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEEC---CC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCE
T ss_pred hHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCC---cc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccc
Confidence 999999999999976 77777788888887776532211 11 567778 5999987 89999999998754332111
Q ss_pred ceEEEec---CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCC
Q psy12425 434 HFHVETS---ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPP 485 (591)
Q Consensus 434 ~~~~~~~---~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p 485 (591)
....... ...+.|.|.....+|.|.|+|.|.|..+.....+.+. ..|..|
T Consensus 163 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~--~~~~~~ 215 (221)
T 3eow_R 163 QVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVS--LTVYYP 215 (221)
T ss_dssp EECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEEC--CCCCC-
T ss_pred eeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEE--EEEEcc
Confidence 1100011 1356799999999999999999999988766655554 444444
No 264
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.72 E-value=1.1e-16 Score=136.69 Aligned_cols=169 Identities=15% Similarity=0.213 Sum_probs=115.2
Q ss_pred ccccceeccccEEEEEEEcCCC--CCeeEEecCC--ccCC----------------CCCceEEEEe--CCeEEEEEccee
Q psy12425 299 LRNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REIT----------------PSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~~----------------~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
+....+.+|+.+.|.|.+.+.+ .+.+.|+++. .... ...++.+..+ +...+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 3456788999999999999875 4889998852 2110 1245555543 345689999999
Q ss_pred cccceEEEEEEEeCCcceeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEeeCCeEee
Q psy12425 357 GVDADEYVCRAVNKGGVKSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRDNEVIE 430 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~~~~~~ 430 (591)
.+|+|.|.|.+.|.. .......|.|.. +|.+...+ ....+..|+.+.|.|.+.|. |.| .+.|++++..+.
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~---~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~ 162 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLA---PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSG 162 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEEC---CTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEec---CCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccc
Confidence 999999999999864 222335666653 23322111 11234679999999999987 888 999999987542
Q ss_pred eccceEEEecC---CeeEEEEeccCCCcceeEEEEEEcCCCccce
Q psy12425 431 SGGHFHVETSE---RHAILTIRDASNVDTAPYRVVAENDLGMDSA 472 (591)
Q Consensus 431 ~~~~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~ 472 (591)
......+...+ ....|.|.....++ |.|+|.|.|..|....
T Consensus 163 ~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 163 VHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp EEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred eEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 11111111111 24568999988877 9999999999887543
No 265
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.72 E-value=1.3e-16 Score=133.05 Aligned_cols=74 Identities=12% Similarity=0.193 Sum_probs=62.0
Q ss_pred eeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEe
Q psy12425 304 AIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 383 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 383 (591)
+.+|+.+.|.|.+.+.|.+.+.|++++..+ .... ..|.|.++..+|+|.|+|.|.|..+.....+.|.|.
T Consensus 109 v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~-------~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~ 178 (184)
T 2ny1_B 109 LLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------IQGG---KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 178 (184)
T ss_dssp EETTCCEEEEEECCTTCCCEEEEECTTSCE-------EEES---SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eecCCCEEEEEEcCCCCCCEEEEEeCCCcc-------ccCc---eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEE
Confidence 467888999999999999999999986554 1122 279999999999999999999999988888999888
Q ss_pred cCCc
Q psy12425 384 TAPK 387 (591)
Q Consensus 384 ~~p~ 387 (591)
..|.
T Consensus 179 ~~p~ 182 (184)
T 2ny1_B 179 AFQK 182 (184)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 7654
No 266
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.72 E-value=1.1e-15 Score=126.27 Aligned_cols=158 Identities=12% Similarity=0.152 Sum_probs=114.9
Q ss_pred cceeccccEEEEEEEcCCCCC--eeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeE
Q psy12425 302 ANAIQNHNAQFQCTITGCPKP--TISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAE 379 (591)
Q Consensus 302 ~~~~~g~~~~l~c~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~ 379 (591)
+.+..|+++.|.|.+ +.|.| .|.|++.+..+ .+.. .......|.|.+++.+|+|.|.|.|.|..|.....+.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~--~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 90 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQ--SDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQ 90 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEE--EESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEE--ecCCccEEEECccCcccCceEEEEEEeCCCceEEEEE
Confidence 578899999999999 88888 99999865444 2222 2345568999999999999999999999988888899
Q ss_pred EEEecCCcccCCCCcccceeecCCCeEEEEEeeecc-CC----CeEEEeeCCeEeeeccceE--EE------ecCC----
Q psy12425 380 LIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK----PKITWYRDNEVIESGGHFH--VE------TSER---- 442 (591)
Q Consensus 380 l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~----~~v~W~~~~~~~~~~~~~~--~~------~~~~---- 442 (591)
|.|..+|....... .....|+.+ |.|.+.+. |. +++.|++++..+....... +. ..+.
T Consensus 91 ltV~~~P~~~~i~~----~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (210)
T 1gsm_A 91 LLVYAFPNQLTVSP----AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLF 165 (210)
T ss_dssp EEEEBCCSEEEEES----SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCE
T ss_pred EEEEecCCCcEEcc----ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEE
Confidence 99999887543111 134567778 99999985 64 4899999999985432111 10 0011
Q ss_pred --eeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 443 --HAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 443 --~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
.+.+.+.....++.+.|+|.|.+..-..
T Consensus 166 ~vts~~~~~~~~~D~~~~~tC~a~~~L~~~ 195 (210)
T 1gsm_A 166 RVTERWRLPPLGTPVPPALYCQATMRLPGL 195 (210)
T ss_dssp EEEEEEECCCCCSSCCSEEEEEEEEEETTE
T ss_pred EEEEEEeecCCcccCCceEEEEEEeeCCCC
Confidence 2334444666677789999999886443
No 267
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.71 E-value=5e-16 Score=139.53 Aligned_cols=180 Identities=14% Similarity=0.195 Sum_probs=121.4
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCCc--cCC-----------------CCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGSR--EIT-----------------PSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~~--~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
..+.+.+|+.+.|.|.+.+.+ .+.+.|+++.. ... ...++.+..+ +...+|.|.+++
T Consensus 30 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 109 (291)
T 2gki_A 30 GPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLT 109 (291)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCC
T ss_pred CcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCC
Confidence 456688999999999998876 57899998532 110 0134444432 346789999999
Q ss_pred cccceEEEEEEEeCC-cc----eeeeeEEEEecC----------------CcccCCCCcccceeecCCCeEEEEEeeecc
Q psy12425 357 GVDADEYVCRAVNKG-GV----KSTKAELIIMTA----------------PKFNVPPRFRDTAYFDKGENVVVKIPFTGY 415 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~-g~----~~~~~~l~v~~~----------------p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~ 415 (591)
.+|+|.|.|.+.|.. |. ......|.|..+ +.+...+ ....+.+|+.++|.|.+.+.
T Consensus 110 ~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p---~~~~v~~G~~v~L~C~~~~~ 186 (291)
T 2gki_A 110 SEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSP---SSLAVSAGEKVTMSCKSSQS 186 (291)
T ss_dssp GGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSC---SEEEEETTSCEEEEEEESSC
T ss_pred HHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCC---CEEEEcCCCcEEEEEEcCCc
Confidence 999999999999875 21 122346666651 1121111 23467899999999999988
Q ss_pred CCC------eEEEeeCC--eEe---ee---------ccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCcc-ceEE
Q psy12425 416 PKP------KITWYRDN--EVI---ES---------GGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMD-SAIV 474 (591)
Q Consensus 416 p~~------~v~W~~~~--~~~---~~---------~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~-~~~~ 474 (591)
+.+ .+.|++++ ... .. ..++.+........|+|.+++.+|+|.|.|.|.|..... ..-.
T Consensus 187 ~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt 266 (291)
T 2gki_A 187 LFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGT 266 (291)
T ss_dssp CEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred cccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCE
Confidence 876 99999963 211 11 235555445567789999999999999999999854221 2233
Q ss_pred EEEecCCC
Q psy12425 475 KIQISDRP 482 (591)
Q Consensus 475 ~~~v~~~p 482 (591)
.|.++..+
T Consensus 267 ~l~v~~~~ 274 (291)
T 2gki_A 267 KLEIKHHH 274 (291)
T ss_dssp EEEEECC-
T ss_pred EEEEEeeE
Confidence 44554433
No 268
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.71 E-value=2.2e-17 Score=157.17 Aligned_cols=212 Identities=17% Similarity=0.163 Sum_probs=148.5
Q ss_pred ccCCCCceEEEEEEEcCCeeeEEE-EEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCC--
Q psy12425 57 EIRKEDAGDYTVNLSNSSGSVSGT-FTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM-- 133 (591)
Q Consensus 57 ~~~~~d~g~Y~c~~~n~~g~~~~~-~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~-- 133 (591)
+....+.|.|.|.+.|..+..... .......+|.+|.. + ...+...++.|+|.+|...++..+..|.|.+.....
T Consensus 301 ~S~s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~n-l-~~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~ 378 (536)
T 3fl7_A 301 HTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHY-L-TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPES 378 (536)
T ss_dssp SEECCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSC-E-EEECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-C
T ss_pred CCCCCCCCccEEEEeccccccCCCccccccccCCCcccc-e-EEEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCC
Confidence 344667899999999998876443 33334557777776 3 345788899999999987778789999999986321
Q ss_pred CceEE---------EEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCC
Q psy12425 134 PHWIC---------ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGD 204 (591)
Q Consensus 134 ~~~~~---------~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 204 (591)
..|.. .........+.+.+|.+++.|.|+|.|.|..|.+..+..+..+...+ .+.+|..+.......+
T Consensus 379 ~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T---~~~~Ps~~~~~~~s~t 455 (536)
T 3fl7_A 379 GECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSI---NQTEPPKVRLEGRSTT 455 (536)
T ss_dssp CCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEEC---CSCCCCEEEEEECCC-
T ss_pred CcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEee---cccCCCCCceeeccCC
Confidence 12211 11124577899999999999999999999888743322223333333 3344555555777888
Q ss_pred eEEEEEecCCCCCCcceEEEEEEeeecCCC-ccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCC
Q psy12425 205 FVNLSWDKPLDDGGSRIQGYWIDKHEVGSD-AWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 277 (591)
Q Consensus 205 ~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~ 277 (591)
++.|+|.+|... +..+.+|.|.++..+.. .+.. .......++|.+|.+++.|.|+++|.|..|.+..+.
T Consensus 456 SV~LsW~pP~~~-ng~I~~Y~V~y~~~~~~~~~~~---v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~ 525 (536)
T 3fl7_A 456 SLSVSWSIPPPQ-QSRVWKYEVTYRKKGDSNSYNV---RRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSK 525 (536)
T ss_dssp CCEEEEECCTTT-TTTCSEEEEEEEEC--CCCCEE---EEESSSEEECCSCCSSCEEEEEEEEECC---CEECC
T ss_pred eEEEEEECCcCC-CCcccEEEEEEEECCCCceEEE---EcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCC
Confidence 999999998543 45789999999877554 2222 234568899999999999999999999999876553
No 269
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.71 E-value=2.4e-16 Score=136.85 Aligned_cols=181 Identities=23% Similarity=0.291 Sum_probs=136.7
Q ss_pred CCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEEc
Q psy12425 88 LPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVN 167 (591)
Q Consensus 88 ~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n 167 (591)
++.+|.. +.+......++.|+|.+|. + .+.+|.+.+.......+...........+.+.+|.+++.|.|+|.|.|
T Consensus 5 p~~~P~~-l~~~~~~~~si~l~W~~p~---g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 79 (234)
T 3f7q_A 5 DLGAPQN-PNAKAAGSRKIHFNWLPPS---G-KPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYG 79 (234)
T ss_dssp CCCCCEE-EEEEECSSSCEEEEEECCS---S-CCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCcc-eEEEEcCCCEEEEEEECCC---C-ccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEe
Confidence 3445554 5667778889999999873 3 788999999876554433223345778899999999999999999999
Q ss_pred cCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCc-----cEEEEee
Q psy12425 168 ENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA-----WQRVNVA 242 (591)
Q Consensus 168 ~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~-----~~~~~~~ 242 (591)
..|.+..+.. +........|.+|..+.+.....+++.|+|.+|...+ ..+.+|.|.+...+... |......
T Consensus 80 ~~G~g~~s~~---~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~-g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~ 155 (234)
T 3f7q_A 80 AQGEGPYSSL---VSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETN-GEITAYEVCYGLVNDDNRPIGPMKKVLVD 155 (234)
T ss_dssp TTEECCCCCC---EEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCS-SCCCEEEEEEEEBCTTSCBSSCCEECCCS
T ss_pred CCCcCCCCCe---EEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCC-CceeEEEEEEEECCCCCCccCcceEEEec
Confidence 9988776643 3344445577778888888889999999999986544 47899999998765433 2333222
Q ss_pred ecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCC
Q psy12425 243 ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 277 (591)
Q Consensus 243 ~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~ 277 (591)
......+.|.+|.++..|.|+++|.|..|.+..+.
T Consensus 156 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 190 (234)
T 3f7q_A 156 NPKNRMLLIENLRESQPYRYTVKARNGAGWGPERE 190 (234)
T ss_dssp CTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEE
T ss_pred CCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcC
Confidence 33446899999999999999999999999876543
No 270
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.71 E-value=4.1e-16 Score=139.20 Aligned_cols=181 Identities=15% Similarity=0.173 Sum_probs=122.7
Q ss_pred ccccceeccccEEEEEEEcCC--CCCeeEEecCCc--cCC-----------------CCCceEEEE--eCCeEEEEEcce
Q psy12425 299 LRNANAIQNHNAQFQCTITGC--PKPTISWLKGSR--EIT-----------------PSARHHIFA--EGDTYTLIINSV 355 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~~~--~~~-----------------~~~~~~~~~--~~~~~~l~i~~~ 355 (591)
+..+.+.+|+.+.|.|.+.+. +.+.+.|++... ... ...++.+.. .+...+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 456778899999999999875 567899987421 110 012455543 344578999999
Q ss_pred ecccceEEEEEEEeC---------CcceeeeeEEEEec---------------CCcccCCCCcccceeecCCCeEEEEEe
Q psy12425 356 YGVDADEYVCRAVNK---------GGVKSTKAELIIMT---------------APKFNVPPRFRDTAYFDKGENVVVKIP 411 (591)
Q Consensus 356 ~~~d~g~y~c~a~n~---------~g~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~~~~g~~~~l~c~ 411 (591)
+.+|+|.|.|.+.|. .........|.|.. ++.+..++ . ..+.+|+.++|.|.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p---~-~~v~~G~~v~L~C~ 162 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPP---S-VSKGLRQTATLTCT 162 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCS---E-EEECTTCCEEEEEE
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCC---c-EEEecCCCEEEEEE
Confidence 999999999999986 12223455677765 33333333 2 56789999999999
Q ss_pred eec-cC-CCeEEEeeC--CeEee------------eccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCc---cce
Q psy12425 412 FTG-YP-KPKITWYRD--NEVIE------------SGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGM---DSA 472 (591)
Q Consensus 412 ~~~-~p-~~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~---~~~ 472 (591)
+.+ .+ .+.+.|++. +.... ...++.+........|+|.+++.+|+|.|.|.+.|..+. -..
T Consensus 163 ~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~ 242 (280)
T 3fku_X 163 GNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGG 242 (280)
T ss_dssp CCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBC
T ss_pred ecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECC
Confidence 988 44 479999873 22221 124555555566778999999999999999999997632 133
Q ss_pred EEEEEecCCCC
Q psy12425 473 IVKIQISDRPD 483 (591)
Q Consensus 473 ~~~~~v~~~p~ 483 (591)
...|.|...|.
T Consensus 243 ~t~l~V~~~~~ 253 (280)
T 3fku_X 243 GTKLTVLGQPK 253 (280)
T ss_dssp CCEEEEC----
T ss_pred CEEEEECCCCC
Confidence 44566655443
No 271
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.71 E-value=2.3e-16 Score=135.18 Aligned_cols=73 Identities=18% Similarity=0.165 Sum_probs=59.2
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECC--EEe----------e--cCCceeEEEeCCeEEEEEcccCCCCceEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG--RVV----------Q--SDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 67 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~--~~~----------~--~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 67 (591)
|..+.+.+|+++.|.|.+.+.|.+.|.|+|++ ..+ . ...++.+...+...+|.|.+++.+|+|.|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYF 87 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEE
Confidence 67899999999999999999988999999853 211 1 125666666667789999999999999999
Q ss_pred EEEEcCC
Q psy12425 68 VNLSNSS 74 (591)
Q Consensus 68 c~~~n~~ 74 (591)
|.+.|..
T Consensus 88 C~~~~~~ 94 (213)
T 3d9a_L 88 CQQSNSW 94 (213)
T ss_dssp EEECSSS
T ss_pred EeeecCC
Confidence 9997653
No 272
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.71 E-value=4.1e-17 Score=151.11 Aligned_cols=81 Identities=20% Similarity=0.232 Sum_probs=65.2
Q ss_pred ccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeC-------CeEEEEEcceecccceEEEEEEEeCCcceeeee
Q psy12425 306 QNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEG-------DTYTLIINSVYGVDADEYVCRAVNKGGVKSTKA 378 (591)
Q Consensus 306 ~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~ 378 (591)
+|+.+.|.|.+.|.|.|.+.|++++..+............ ...+|.|.++..+|+|.|+|.|.|..|.....+
T Consensus 260 ~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~ 339 (347)
T 2ifg_A 260 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 339 (347)
T ss_dssp ESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEE
Confidence 3456789999999999999999999988765554432211 245799999999999999999999999998888
Q ss_pred EEEEecCC
Q psy12425 379 ELIIMTAP 386 (591)
Q Consensus 379 ~l~v~~~p 386 (591)
.+.|..+|
T Consensus 340 ~l~V~~~P 347 (347)
T 2ifg_A 340 MAAFMDNP 347 (347)
T ss_dssp EECSCCCC
T ss_pred EEEecCCC
Confidence 88887654
No 273
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.71 E-value=1.2e-15 Score=133.17 Aligned_cols=180 Identities=19% Similarity=0.281 Sum_probs=120.1
Q ss_pred EEeeccccceeccccEEEEEEEcCC--CCCeeEEecCC--ccC--------------C---CCCceEEEEeC--CeEEEE
Q psy12425 295 IIVPLRNANAIQNHNAQFQCTITGC--PKPTISWLKGS--REI--------------T---PSARHHIFAEG--DTYTLI 351 (591)
Q Consensus 295 ~~~~~~~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~~--~~~--------------~---~~~~~~~~~~~--~~~~l~ 351 (591)
+...+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. ... . ...++.+..+. ...+|.
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (242)
T 1hxm_B 4 LEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLT 83 (242)
T ss_dssp EECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEE
T ss_pred cCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEE
Confidence 3344456678999999999999875 67889999843 211 0 23455555433 467899
Q ss_pred EcceecccceEEEEEEEeCCc-c------eeeeeEEEEecC-------CcccCCCCcccceeecCCCeEEEEEeeecc-C
Q psy12425 352 INSVYGVDADEYVCRAVNKGG-V------KSTKAELIIMTA-------PKFNVPPRFRDTAYFDKGENVVVKIPFTGY-P 416 (591)
Q Consensus 352 i~~~~~~d~g~y~c~a~n~~g-~------~~~~~~l~v~~~-------p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p 416 (591)
|.+++.+|+|.|.|.+.+... . ......|.|... |...... .....+..|+.+.|.|.+.+. |
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~--p~~~~~~~g~~v~L~C~~~g~~P 161 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFL--PSIAETKLQKAGTYLCLLEKFFP 161 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCC--CCGGGGGSSSCEEEEEEEEEESS
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEEC--CChhhcccCCCceEEEEEeeEEC
Confidence 999999999999999998631 1 123467777763 2222111 122234679999999999986 6
Q ss_pred C-CeEEEeeCCe-Eeeeccc-eEEEecC---CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEe
Q psy12425 417 K-PKITWYRDNE-VIESGGH-FHVETSE---RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 478 (591)
Q Consensus 417 ~-~~v~W~~~~~-~~~~~~~-~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v 478 (591)
. +.+.|++++. .+..... .....++ ....|.|..... + |.|+|.|.|..+.......+.+
T Consensus 162 ~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 162 DVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp CCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 4 7999999986 4432110 0111111 135688877664 4 9999999999998766666665
No 274
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.71 E-value=1.1e-15 Score=130.48 Aligned_cols=182 Identities=19% Similarity=0.269 Sum_probs=132.8
Q ss_pred CCCCCCcceEEecCceEEEEecCCCCC---CCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEE
Q psy12425 90 GPPIGPLDVSEITKHTCTLHWNPPKYD---GGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAV 166 (591)
Q Consensus 90 ~~p~~~~~~~~~~~~~~~l~w~~p~~~---~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~ 166 (591)
.+|.. +.+......++.|+|.+|... ....+..|.+.++......+...........+.+.+|.+++.|.|+|+|.
T Consensus 6 ~~P~~-l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 84 (211)
T 3p4l_A 6 MPPVG-VQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVT 84 (211)
T ss_dssp CCCEE-EEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEESSSEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCC-EEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCCceEEEecCcCCCCEEEEEEEEE
Confidence 34444 566777889999999987633 23578899999987665544433345667899999999999999999999
Q ss_pred ccCCCCCCCCccCcccccCCCCCCC-CCCCCeEEee--cCCeEEEEEecCCCCCCcceEEEEEEeeecCCC---ccEEEE
Q psy12425 167 NENGMGPPLEGINPIKAKSPYDKPS-PPGIPVVTQV--GGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD---AWQRVN 240 (591)
Q Consensus 167 n~~g~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~--~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~---~~~~~~ 240 (591)
|..|.+..+.. +........|. +|..+.+... ...++.|+|.+|...+ ..+.+|.|.+...+.. .|....
T Consensus 85 n~~g~~~~S~~---~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~-g~i~~Y~v~~~~~~~~~~~~~~~~~ 160 (211)
T 3p4l_A 85 KGRRSSTWSMT---AHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEAN-GKITGYIIYYSTDVNAEIHDWVIEP 160 (211)
T ss_dssp ETTEECCCCCC---EEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCC-SCCCEEEEEEESCTTSCGGGSEEEE
T ss_pred cCCCCCcccee---EeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCC-CCEEEEEEEEEECCCCCCCceEEEE
Confidence 99988776543 33333334454 6666666666 3679999999986544 4799999999876544 233222
Q ss_pred eeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCC
Q psy12425 241 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSS 277 (591)
Q Consensus 241 ~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~ 277 (591)
.......+.|.+|.++..|.|+++|.|..|.+..+.
T Consensus 161 -~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 196 (211)
T 3p4l_A 161 -VVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSE 196 (211)
T ss_dssp -EESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCC
T ss_pred -ecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCC
Confidence 234567899999999999999999999999887654
No 275
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.71 E-value=2.3e-16 Score=139.60 Aligned_cols=171 Identities=13% Similarity=0.216 Sum_probs=107.7
Q ss_pred CeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCC--ccCC--------C---------CCceEEE--EeCCeEEEE
Q psy12425 293 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGS--REIT--------P---------SARHHIF--AEGDTYTLI 351 (591)
Q Consensus 293 p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~--~~~~--------~---------~~~~~~~--~~~~~~~l~ 351 (591)
|.+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. .... . ..+.... ......+|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 44445556677899999999999999999999998832 1100 0 0011111 122344799
Q ss_pred EcceecccceEEEEEEEeCCc---ceeeeeEEEEecCC-----------------cccCCCCcccceeecCCCeEEEEEe
Q psy12425 352 INSVYGVDADEYVCRAVNKGG---VKSTKAELIIMTAP-----------------KFNVPPRFRDTAYFDKGENVVVKIP 411 (591)
Q Consensus 352 i~~~~~~d~g~y~c~a~n~~g---~~~~~~~l~v~~~p-----------------~~~~~~~~~~~~~~~~g~~~~l~c~ 411 (591)
|.+++.+|+|.|.|.+.|..+ .......|.|...+ .+...+ ....+..|+.+.|.|.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p---~~~~v~~G~~v~L~C~ 159 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQ---SSVSMPVRKAVTLNCL 159 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCC---CCEEEETTCCEEECCE
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeC---CEEEEcCCCCEEEEEE
Confidence 999999999999999999876 33445667776632 222222 3456789999999999
Q ss_pred eecc-CCCeEEEeeCCe--Eee------------eccceEEE--ecCCeeEEEEeccCCCcceeEEEEEEcC
Q psy12425 412 FTGY-PKPKITWYRDNE--VIE------------SGGHFHVE--TSERHAILTIRDASNVDTAPYRVVAEND 466 (591)
Q Consensus 412 ~~~~-p~~~v~W~~~~~--~~~------------~~~~~~~~--~~~~~~~l~i~~~~~~~~g~y~c~a~n~ 466 (591)
+.+. +.+.+.|++.+. ... ...++.+. .......|+|.+++.+|+|.|.|.+.+.
T Consensus 160 ~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 160 YETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp EECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred CCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 8875 889999998531 110 12334433 2234567999999999999999999864
No 276
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.70 E-value=8e-16 Score=132.04 Aligned_cols=167 Identities=14% Similarity=0.211 Sum_probs=115.8
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccC-----------------CCCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REI-----------------TPSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. ... ....++.+..+ ++..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 346688999999999998876 6789998843 110 01245555543 346799999999
Q ss_pred cccceEEEEEEEeCCcc---eeeeeEEEEecC----CcccCCCCcccceeecCCCeEEEEEeeecc-CC--CeEEEeeCC
Q psy12425 357 GVDADEYVCRAVNKGGV---KSTKAELIIMTA----PKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK--PKITWYRDN 426 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~---~~~~~~l~v~~~----p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~--~~v~W~~~~ 426 (591)
.+|+|.|.|.+.+..+. ......|.|... |.+...+ ...+..|+.+.|.|.+.+. |. +.+.|++++
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~----~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~ 163 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT----LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSG 163 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC----CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCC
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee----cccccCCCcEEEEEEEEeEECCCcEEEEEecCC
Confidence 99999999999997653 233457777643 2222211 1224679999999999987 76 799999998
Q ss_pred eEeeec-cceEEEecCC---eeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 427 EVIESG-GHFHVETSER---HAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 427 ~~~~~~-~~~~~~~~~~---~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
..+... .......++. .+.|.|......|.|.|+|.|.|..|..
T Consensus 164 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~ 211 (220)
T 2fbj_H 164 KDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPV 211 (220)
T ss_dssp SSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCC
T ss_pred EecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCce
Confidence 765211 1111111111 2358888888889999999999998874
No 277
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.70 E-value=1.7e-16 Score=136.06 Aligned_cols=178 Identities=20% Similarity=0.240 Sum_probs=128.3
Q ss_pred CCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEe-------------cCCeeEEEEecc-CCCcceeEEEEEEcCCC
Q psy12425 403 GENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVET-------------SERHAILTIRDA-SNVDTAPYRVVAENDLG 468 (591)
Q Consensus 403 g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-------------~~~~~~l~i~~~-~~~~~g~y~c~a~n~~g 468 (591)
+....|.|...+.....+.|........ ...|.+.. ......+.|.++ .+...|.|+|.|.|..|
T Consensus 9 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~-~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A~n~~G 87 (215)
T 1bqu_A 9 EKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALG 87 (215)
T ss_dssp CCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTE
T ss_pred CCCEeeEeEECCCCcEEEEcCCCCCCCC-CceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEEEEeccc
Confidence 3445677777666677778865322110 11222221 123467899999 89999999999999999
Q ss_pred ccc-eEEEEEec--CCCCCCCCCeeeee--cCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEec----eeeeeEE
Q psy12425 469 MDS-AIVKIQIS--DRPDPPQFPTVEDI--GHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG----NTRFTTM 539 (591)
Q Consensus 469 ~~~-~~~~~~v~--~~p~~p~~~~~~~~--~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~----~~~~~~~ 539 (591)
... ....+... .+|.+|.++.+... +.+++.|+|++|..+++ .+.+|+|+|+......|..+. ......+
T Consensus 88 ~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~ 166 (215)
T 1bqu_A 88 KVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPPEDTASTRSSF 166 (215)
T ss_dssp EEECCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGT-SCEEEEEEEEETTCSSCEECCGGGGCSCCSEE
T ss_pred CccCCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCc-ceEEEEEEEccCCCCCceEeccccccCccceE
Confidence 874 23333322 36888988888765 67899999998876554 789999999988878888763 4566799
Q ss_pred EEcCcccCceEEEEEEEEcCCcCCCCCCCcc--eEEeccccccCC
Q psy12425 540 AITGLSPGHQYEFRVYAENVYGRSDPSTTSD--LITTYGELLSGM 582 (591)
Q Consensus 540 ~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~--~~~t~~~~p~~~ 582 (591)
+|.+|.+++.|.|+|+|.|..|.|.+|..+. .++|.+++|..+
T Consensus 167 ~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~P~~~ 211 (215)
T 1bqu_A 167 TVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKE 211 (215)
T ss_dssp EECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCHHHHH
T ss_pred EeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccccCCcCC
Confidence 9999999999999999999999977665543 245666666543
No 278
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.70 E-value=1.2e-16 Score=136.95 Aligned_cols=177 Identities=15% Similarity=0.203 Sum_probs=112.8
Q ss_pred CCCeEEeeccccc--eeccccEEEEEEEcCC---CC-CeeEEecCCccCCCCCceEEE-EeCC----eEEEEEcceeccc
Q psy12425 291 KAPEIIVPLRNAN--AIQNHNAQFQCTITGC---PK-PTISWLKGSREITPSARHHIF-AEGD----TYTLIINSVYGVD 359 (591)
Q Consensus 291 ~~p~~~~~~~~~~--~~~g~~~~l~c~~~~~---p~-~~v~W~~~~~~~~~~~~~~~~-~~~~----~~~l~i~~~~~~d 359 (591)
.+|.+...+.... +.+|+.+.|.|.+.+. |. +.|.|++++..+......... ..++ ..+|.|.+++.+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 4566655444444 7899999999999886 33 789999998776543211111 1111 2379999999999
Q ss_pred ceEEEEEEEeCCcceeeeeEE----EEecCCcccCCCCcccceeecCCCeEEEEEeeec-cCCC-eEEEeeCCeEeeecc
Q psy12425 360 ADEYVCRAVNKGGVKSTKAEL----IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKP-KITWYRDNEVIESGG 433 (591)
Q Consensus 360 ~g~y~c~a~n~~g~~~~~~~l----~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~~~~~~~~~ 433 (591)
+|.|+|.|.|..+.......+ .+..+|.+...+.. .....|+.+.|.|.+.| .|.+ .|.|+++|..+....
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~---~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~ 164 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPP---AEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYK 164 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCC---GGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEE
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCC---hHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCce
Confidence 999999999987654122222 23345544322211 11135899999999998 5765 999999998874322
Q ss_pred ceEEE-ecCC----eeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 434 HFHVE-TSER----HAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 434 ~~~~~-~~~~----~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
..... ..+. ...|.|.....+|.|.|+|.|.|.....
T Consensus 165 ~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~~ 206 (218)
T 2rgs_A 165 DTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLKN 206 (218)
T ss_dssp ECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSGG
T ss_pred ecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCCC
Confidence 21111 1111 1234455555556899999999987654
No 279
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.70 E-value=9.5e-16 Score=136.21 Aligned_cols=175 Identities=15% Similarity=0.198 Sum_probs=119.5
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCC-----CCeeEEecCC--ccC------------CCCCceEEEEeCCeEEEEE
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCP-----KPTISWLKGS--REI------------TPSARHHIFAEGDTYTLII 352 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p-----~~~v~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i 352 (591)
.+.+...+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. ... ....++.+...+...+|.|
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 45555666677889999999999999887 4889999853 211 0134666666667789999
Q ss_pred cceecccceEEEEEEEeCCcce-eeeeEEEEecCCccc---CCC-----------------CcccceeecCCCeEEEEEe
Q psy12425 353 NSVYGVDADEYVCRAVNKGGVK-STKAELIIMTAPKFN---VPP-----------------RFRDTAYFDKGENVVVKIP 411 (591)
Q Consensus 353 ~~~~~~d~g~y~c~a~n~~g~~-~~~~~l~v~~~p~~~---~~~-----------------~~~~~~~~~~g~~~~l~c~ 411 (591)
.+++.+|+|.|.|.+.|..+.. .....|.|...+... .+| .......+.+|+.++|.|.
T Consensus 95 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~ 174 (268)
T 1x9q_A 95 NRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCV 174 (268)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEE
T ss_pred CCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEE
Confidence 9999999999999999876532 234566666543210 000 0012456789999999999
Q ss_pred eeccCC--CeEEEeeC--CeEee-------------------eccceEEEec--CCeeEEEEeccCCCcceeEEEEEEcC
Q psy12425 412 FTGYPK--PKITWYRD--NEVIE-------------------SGGHFHVETS--ERHAILTIRDASNVDTAPYRVVAEND 466 (591)
Q Consensus 412 ~~~~p~--~~v~W~~~--~~~~~-------------------~~~~~~~~~~--~~~~~l~i~~~~~~~~g~y~c~a~n~ 466 (591)
+.+.+. +.+.|+++ +.... ...++.+..+ .....|.|.+++.+|+|.|.|.|.|.
T Consensus 175 ~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 175 TSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 998764 79999985 22211 1234444432 23578999999999999999999874
No 280
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.70 E-value=2.6e-16 Score=135.49 Aligned_cols=172 Identities=13% Similarity=0.204 Sum_probs=116.4
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--cc---C---C-------------CCCceEEEEe--CCeEEEEEcc
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--RE---I---T-------------PSARHHIFAE--GDTYTLIINS 354 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~---~---~-------------~~~~~~~~~~--~~~~~l~i~~ 354 (591)
....+.+|+.+.|.|.+.+.+ .+.+.|++++ .. + . ...++.+..+ ++..+|.|.+
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNN 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEcc
Confidence 455688999999999999876 6899998853 11 0 0 0245555543 3456899999
Q ss_pred eecccceEEEEEEEeCCcce---eeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEeeC
Q psy12425 355 VYGVDADEYVCRAVNKGGVK---STKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRD 425 (591)
Q Consensus 355 ~~~~d~g~y~c~a~n~~g~~---~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~ 425 (591)
++..|+|.|.|.+.|..+.. .....|.|.. +|.+...+. ...+..|+.+.|.|.+.|. |.| .+.|+++
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~---~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 164 (220)
T 1pz5_B 88 LRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVP---GCSDTSGSSVTLGCLVKGYFPEPVTVKWNYG 164 (220)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECC---CSCCSCSSSEEEEEEEEEEBSSCCEEEEGGG
T ss_pred CCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEccc---ccccCCCCcEEEEEEEEEEeCCCeEEEEecC
Confidence 99999999999999976432 2346677763 233221111 1134679999999999987 888 9999998
Q ss_pred CeEee--eccceEE-EecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEE
Q psy12425 426 NEVIE--SGGHFHV-ETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVK 475 (591)
Q Consensus 426 ~~~~~--~~~~~~~-~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~ 475 (591)
+.... ....... ......+.|.|.....++ |.|+|.|.|..|.....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 165 ALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp TCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 86311 0000000 000124678898888866 9999999999997555443
No 281
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.70 E-value=8e-18 Score=146.60 Aligned_cols=174 Identities=13% Similarity=0.190 Sum_probs=98.9
Q ss_pred CeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCc--cC------------CCCCceEEEEeCCeEEEEEcceecc
Q psy12425 293 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSR--EI------------TPSARHHIFAEGDTYTLIINSVYGV 358 (591)
Q Consensus 293 p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~--~~------------~~~~~~~~~~~~~~~~l~i~~~~~~ 358 (591)
+.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++.. .. ....++.+...+...+|.|.+++.+
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 103 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSE 103 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CC
T ss_pred eeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHH
Confidence 444555567778999999999999988888899988532 11 0122343333444558999999999
Q ss_pred cceEEEEEEEeCCcce-eeeeEEEEec---CCcccCCCCcccceeecCCCeEEEEEeeeccC-CC-eEEEeeCCeEeeec
Q psy12425 359 DADEYVCRAVNKGGVK-STKAELIIMT---APKFNVPPRFRDTAYFDKGENVVVKIPFTGYP-KP-KITWYRDNEVIESG 432 (591)
Q Consensus 359 d~g~y~c~a~n~~g~~-~~~~~l~v~~---~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p-~~-~v~W~~~~~~~~~~ 432 (591)
|+|.|.|.+.|..+.. .....+.|.. +|.+...+. ...+..|+.+.|.|.+.|.+ .+ .+.|+++|..+..+
T Consensus 104 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~---~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 180 (233)
T 3bqu_C 104 DVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPP---SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 180 (233)
T ss_dssp CCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECC---CHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CC
T ss_pred HCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCC---CHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCC
Confidence 9999999999876643 2234555554 333332111 11123589999999999854 43 79999999877544
Q ss_pred cceE--EEecC-----CeeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 433 GHFH--VETSE-----RHAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 433 ~~~~--~~~~~-----~~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
.... ..... ....|.|.....+|.|.|+|.|.|....
T Consensus 181 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 181 VLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred ceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 1111 11111 1356889999899999999999998554
No 282
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.69 E-value=2e-15 Score=140.15 Aligned_cols=308 Identities=16% Similarity=0.161 Sum_probs=139.1
Q ss_pred CcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeec-CCeEEEEEecCCC-C-CCcceEEEEEEeeecC
Q psy12425 156 GQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVG-GDFVNLSWDKPLD-D-GGSRIQGYWIDKHEVG 232 (591)
Q Consensus 156 ~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~v~l~w~~~~~-~-~~~~~~~y~~~~~~~~ 232 (591)
...|.+.+.+.+..|.+..... ...|.+|.++.+.... ..++.|+|.++.. + .+..+..|.+.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~---------~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~ 77 (380)
T 3lb6_C 7 AVGCLYTFLISTTFGCTSSSDT---------EIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIG 77 (380)
T ss_dssp ---------------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETT
T ss_pred ehhhhhhheeecccccccCCcc---------cccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCC
Confidence 4456677777776664422211 1246778888887666 5889999999865 2 2235788999999988
Q ss_pred CCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcC----CCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccc
Q psy12425 233 SDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNE----AGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNH 308 (591)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~----~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 308 (591)
...|...... .. .....+.....|.|+++|.|. .|.+.++..+..+....+. ......
T Consensus 78 ~~~w~~~~~~--~~--~~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~e--------------g~P~~~ 139 (380)
T 3lb6_C 78 SETWKTIITK--NL--HYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQ--------------GIPETX 139 (380)
T ss_dssp CSSCEEEEES--SS--EEEEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCC--------------SCTTSS
T ss_pred CCcceEEEec--cE--EEEEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCC--------------CCCCCC
Confidence 7889888664 22 233345558899999999965 5666555443333322110 011223
Q ss_pred cEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcc
Q psy12425 309 NAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 388 (591)
Q Consensus 309 ~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~ 388 (591)
...|.|.........+.|...... .....|. |....... .....|.-. .
T Consensus 140 P~nl~C~~~~~~~l~csW~p~~~~-~~~~~Y~---------l~y~~~~~--~~~~~C~~~-------------~------ 188 (380)
T 3lb6_C 140 VQDMDCVYYNWQYLLCSWKPGIGV-LLDTNYN---------LFYWYEGL--DHALQCVDY-------------I------ 188 (380)
T ss_dssp CEEEEEEEETTTEEEEEEECC-------CCEE---------EEEECTTC--SSCEECSEE-------------E------
T ss_pred CcEeEEEECCCcEEEEEEcCCCCC-CCCccEE---------EEEEECCC--CccccCCCc-------------c------
Confidence 346677766655566778643211 0001111 11100000 000001000 0
Q ss_pred cCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCC
Q psy12425 389 NVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLG 468 (591)
Q Consensus 389 ~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g 468 (591)
...| ....|. +...++.....|.+.+.|.|..|
T Consensus 189 -----------~~~g--~~~~C~----------------------------------~~~~~~~~~~~Y~i~V~a~n~~G 221 (380)
T 3lb6_C 189 -----------KADG--QNIGCR----------------------------------FPYLEASDYKDFYICVNGSSENK 221 (380)
T ss_dssp -----------EC----CEEEEE----------------------------------CCCCTTCSSSCEEEEEEEC----
T ss_pred -----------ccCC--ceEEEE----------------------------------eCCCcccceeEEEEEEEEEcCCe
Confidence 0000 001121 11123344556778888988888
Q ss_pred ccc-eEEEEEecC--CCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcC-c
Q psy12425 469 MDS-AIVKIQISD--RPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITG-L 544 (591)
Q Consensus 469 ~~~-~~~~~~v~~--~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~-l 544 (591)
... ....+.... +|.||.++.+...+.+++.|+|++|....+..+.+|+++|+.. +..|...... ..+.|.+ |
T Consensus 222 ~~~s~~~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~-~~~w~~~~~~--~~~~l~~~L 298 (380)
T 3lb6_C 222 PIRSSYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIRED-DTTLVTATVE--NETYTLKTT 298 (380)
T ss_dssp -CCCEEEEECGGGSCCCCCCEEEEEC-------CEEEECCSSSCCSTTEEEEECC---------CCEES--SSCC-----
T ss_pred eeccccEEEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCCCCCcceEEEEEEEEeC-CCCceEeccc--ceEEEeCcc
Confidence 753 334454443 6899999988877778999999988654445778999999975 4566543222 3577888 9
Q ss_pred ccCceEEEEEEEEcC-----CcC-CCCCCCcce
Q psy12425 545 SPGHQYEFRVYAENV-----YGR-SDPSTTSDL 571 (591)
Q Consensus 545 ~~~~~Y~~~v~A~n~-----~G~-~~~s~~~~~ 571 (591)
.+++.|.|+|+|... .|. |++|.+..+
T Consensus 299 ~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~ 331 (380)
T 3lb6_C 299 NETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCW 331 (380)
T ss_dssp -------CCEEEEECTTTCSSCCCCCCCCC---
T ss_pred CCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEE
Confidence 999999999999843 232 555655433
No 283
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.69 E-value=1e-16 Score=130.73 Aligned_cols=152 Identities=17% Similarity=0.242 Sum_probs=107.1
Q ss_pred ccceeccccEEEEEEEcCCCCCeeEEecCCccCCC------------CCceEEEEeCCeEEEEEcceecccceEEEEEEE
Q psy12425 301 NANAIQNHNAQFQCTITGCPKPTISWLKGSREITP------------SARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
.+.+..|+.+.|.|.+.+ |.+.|.|++++..+.. ..+..+ .....+|.|.+++..|+|.|+|.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~--~~~~~sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYL--DTVSGSLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEE--CTTTCCEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEE--eCCCCeEEECCCChhhCceEEEEEe
Confidence 355789999999999854 8889999997653321 012222 2223379999999999999999999
Q ss_pred eCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEE
Q psy12425 369 NKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTI 448 (591)
Q Consensus 369 n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i 448 (591)
|..| ...+.|.|..++.. |.. ..... ...|.|.+.+.|.|.+.|++++..+..... ..+.+
T Consensus 81 n~~~--~~~~~L~V~~~~~~---p~i----~~~~~-~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~---------~~l~~ 141 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEMVSK---PMI----YWECS-NATLTCEVLEGTDVELKLYQGKEHLRSLRQ---------KTMSY 141 (171)
T ss_dssp TCCS--CEEEEEEEECCCCC---CEE----EEETT-TTEEEEECSSCSSCEEEEEETTEEEEEESS---------SEEEE
T ss_pred CCCC--cEEEEEEEECcCCC---CEE----EEecC-CcEEEEEeCCCCCcEEEEEECCEECcCCcc---------eEEEE
Confidence 8877 56677888765321 111 11111 137999999999999999999988754322 23333
Q ss_pred eccCCCcceeEEEEEEcCCCccceEEEE
Q psy12425 449 RDASNVDTAPYRVVAENDLGMDSAIVKI 476 (591)
Q Consensus 449 ~~~~~~~~g~y~c~a~n~~g~~~~~~~~ 476 (591)
.+ .+|.|.|+|.|.|..|..+....+
T Consensus 142 ~~--~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 142 QW--TNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp EC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred ec--cCCCceEEEEEEcccCcccceeEE
Confidence 33 678899999999999987665544
No 284
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.69 E-value=1.6e-15 Score=136.51 Aligned_cols=161 Identities=17% Similarity=0.149 Sum_probs=97.1
Q ss_pred cceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEe--ecCcceEEE--cCCcCCcEEEEEEEEEccCCC
Q psy12425 96 LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST--TCHDTTFIV--QGLTEGQEYLFHVMAVNENGM 171 (591)
Q Consensus 96 ~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~--~~~~~~~~i--~~l~~~~~y~~~~~a~n~~g~ 171 (591)
+.+... ...+.|+|.+|... ...+. |.++++..+...|..... ......+.+ ..|.++..|.|||+|.| .|.
T Consensus 10 v~~~~~-n~~~iL~W~pp~~~-~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A~n-~~~ 85 (306)
T 3s98_A 10 VEVDII-DDNFILRWNRSDES-VGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-ENT 85 (306)
T ss_dssp CEEEEE-TTEEEEECC---------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEEEC-SSC
T ss_pred eEEEEE-CCeEEEEEcCCCCC-CCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEEEe-CCc
Confidence 445443 55688999988743 34565 999999887778876421 233344444 45679999999999999 775
Q ss_pred CCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCC-----CcceEEEEEEeeecCCCc-cEEEEeeecC
Q psy12425 172 GPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDG-----GSRIQGYWIDKHEVGSDA-WQRVNVAICA 245 (591)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~-----~~~~~~y~~~~~~~~~~~-~~~~~~~~~~ 245 (591)
+..+.......... ..+.+|. +.+.. ..+++.|+|.++...+ ...+.+|.+.+...+... |. .. ..
T Consensus 86 S~~s~~~~f~~~~~--~~~~pP~-v~~~~-~~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~-~~---~~ 157 (306)
T 3s98_A 86 SSWYEVDSFTPFRK--AQIGPPE-VHLEA-EDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEER-IE---NI 157 (306)
T ss_dssp EEEEECCCBCHHHH--CBCCCCE-EEEEE-CSSCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEE-EE---EE
T ss_pred CCCEeeeeEechhh--CccCCCe-EEEEE-cCCEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEE-Ee---cc
Confidence 54432222211110 1334443 44443 4468999999554321 236788999988776544 33 22 23
Q ss_pred CceeeecCcccCCcEEEEEEEEc
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQN 268 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n 268 (591)
...+.|.+|.++..|.++++|.+
T Consensus 158 ~~~~~l~~L~p~t~Y~~~V~A~~ 180 (306)
T 3s98_A 158 YSRHKIYKLSPETTYCLKVKAAL 180 (306)
T ss_dssp CTEEEECSCCTTCEEEEEEEEEE
T ss_pred cceEEEccCCCCCeEEEEEEEEE
Confidence 57899999999999999999998
No 285
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.68 E-value=1.1e-15 Score=132.22 Aligned_cols=171 Identities=16% Similarity=0.223 Sum_probs=114.4
Q ss_pred cccceeccccEEEEEEEcCCCC----CeeEEecCC--ccC----------------CCCCceEEEEe--CCeEEEEEcce
Q psy12425 300 RNANAIQNHNAQFQCTITGCPK----PTISWLKGS--REI----------------TPSARHHIFAE--GDTYTLIINSV 355 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p~----~~v~W~~~~--~~~----------------~~~~~~~~~~~--~~~~~l~i~~~ 355 (591)
..+.+.+|+.+.|.|.+.+.+. +.+.|++.. ... ....++.+..+ ....+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV 87 (228)
T ss_dssp CCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC
T ss_pred CceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC
Confidence 4567889999999999998875 899998742 211 01235555543 24579999999
Q ss_pred ecccceEEEEEEEeCCc------c---eeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eE
Q psy12425 356 YGVDADEYVCRAVNKGG------V---KSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KI 420 (591)
Q Consensus 356 ~~~d~g~y~c~a~n~~g------~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v 420 (591)
+.+|+|.|.|.+.|..| . ......|.|.. +|.+...+. ...+..|+.+.|.|.+.+. |.+ .+
T Consensus 88 ~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~---~~~~~~g~~~~l~C~~~g~~P~p~~v 164 (228)
T 3bae_H 88 DTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAP---VCGDTTGSSVTLGCLVKGYFPEPVTL 164 (228)
T ss_dssp CGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC--------CCSEEEEEEEEEEEBSSCCEE
T ss_pred CcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecc---cccccCCCCEEEEEEEccEeCCCEEE
Confidence 99999999999999765 1 12346777763 233321110 1124679999999999986 777 99
Q ss_pred EEeeCCeEeeeccceEEEecC---CeeEEEEeccCCCcceeEEEEEEcCCCccceEE
Q psy12425 421 TWYRDNEVIESGGHFHVETSE---RHAILTIRDASNVDTAPYRVVAENDLGMDSAIV 474 (591)
Q Consensus 421 ~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~ 474 (591)
.|++++..+.......+...+ ....|.|.....++ |.|+|.|.|..|......
T Consensus 165 ~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~ 220 (228)
T 3bae_H 165 TWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDK 220 (228)
T ss_dssp EEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred EEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEE
Confidence 999998753211111111111 24568899888866 999999999988754433
No 286
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.68 E-value=4.4e-16 Score=135.12 Aligned_cols=142 Identities=15% Similarity=0.139 Sum_probs=110.5
Q ss_pred CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEec---CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEE
Q psy12425 441 ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS---DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYI 517 (591)
Q Consensus 441 ~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~---~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~ 517 (591)
.....+.|.+|.+...|.|++.|.|..|.+..+..+.+. ..|.+|.++.+...+.+++.|+|.+|...+ +.+.+|.
T Consensus 55 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~-g~i~~Y~ 133 (234)
T 3f7q_A 55 SKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETN-GEITAYE 133 (234)
T ss_dssp ESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCS-SCCCEEE
T ss_pred CCccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCC-CceeEEE
Confidence 456789999999999999999999998877444333333 457788899999999999999999886544 4899999
Q ss_pred EEeeeCCCCc-----eEEe--ceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEEeccccccCCC
Q psy12425 518 VEKREHPMSS-----WIRV--GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTYGELLSGME 583 (591)
Q Consensus 518 v~~~~~~~~~-----~~~~--~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~~~~p~~~~ 583 (591)
|.|+...... |... .......++|.+|.+++.|.|+|+|.|..|.|++|.....++|.+.+|+.+|
T Consensus 134 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~~~P 206 (234)
T 3f7q_A 134 VCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIP 206 (234)
T ss_dssp EEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCCCCC
T ss_pred EEEEECCCCCCccCcceEEEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCCCCCc
Confidence 9998765432 3333 2344578999999999999999999999999999875334466666665554
No 287
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.68 E-value=7.8e-15 Score=132.34 Aligned_cols=254 Identities=14% Similarity=0.129 Sum_probs=161.3
Q ss_pred CceEEEEecCCC-CCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcc
Q psy12425 103 KHTCTLHWNPPK-YDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPI 181 (591)
Q Consensus 103 ~~~~~l~w~~p~-~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~ 181 (591)
..++.|.|.++. ...+..+.+|.|.+.......+. . . .....+.+|.+++.|.|+|.|.|..|.+..+.. .
T Consensus 22 ~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~~-~--~--~~~~~~~~l~p~t~Y~~~V~A~n~~G~s~~s~~---~ 93 (290)
T 3l5i_A 22 YRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQN-Y--T--VNATKLTVNLTNDRYLATLTVRNLVGKSDAAVL---T 93 (290)
T ss_dssp CEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCEE-E--E--ESSSEEEEEECSSCEEEEEEEEESSCBCCCEEE---E
T ss_pred CceEEEEEccCCchhcCCceEeEEEEEEeCCcCcee-E--e--cCCcEEEEEcCCceEEEEEEEEcCCCCCCCceE---E
Confidence 578999999743 23456889999999887654431 1 1 123456778899999999999999998866532 1
Q ss_pred cccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCC-----ccEEEEeeecCCceeeecCccc
Q psy12425 182 KAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD-----AWQRVNVAICAPSQINIPNLIE 256 (591)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~l~~ 256 (591)
.......++.++..+.+... .+++.|+|.++.. .+.+|.+++...+.. .|.... ......+.+.+|.+
T Consensus 94 ~~~~~~~~~~p~~~~~~~~~-~~si~l~W~~p~~----~i~~Y~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~p 166 (290)
T 3l5i_A 94 IPACDFQATHPVMDLKAFPK-DNMLWVEWTTPRE----SVKKYILEWCVLSDKAPCITDWQQED--GTVHRTYLRGNLAE 166 (290)
T ss_dssp ECCTTCCCCCCCEEEEEEEE-TTEEEEEEECCSS----CCCEEEEEEEEECSSSCCCCEEEEEE--TTCSEEECCSCCCT
T ss_pred eecccccCCCccceeEEEeC-CCeEEEEEeCCCC----CCCcEEEEEEECCCCCCCCcCeEEcc--CCCcceEEecCcCC
Confidence 11111123444444555544 4699999998632 688999999876544 344442 23456788899999
Q ss_pred CCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEc-----CCC--CCeeEEecC
Q psy12425 257 GRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTIT-----GCP--KPTISWLKG 329 (591)
Q Consensus 257 ~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~-----~~p--~~~v~W~~~ 329 (591)
+..|.|++.|.|..|.+.. ...........+..+|.+.. .......+.|+|... +.+ .-.|.|...
T Consensus 167 ~t~Y~~~V~A~n~~g~g~~--~~~~~~t~~~~P~~~p~~~~-----~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~ 239 (290)
T 3l5i_A 167 SKCYLITVTPVYADGPGSP--ESIKAYLKQAPPSKGPTVRT-----KKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTI 239 (290)
T ss_dssp TCEEEEEEEEEETTEECCC--EEEEEESSCCCCSSCCCEEE-----EEECSSCEEEEECCCCHHHHSSCCCEEEEEEEET
T ss_pred ccEEEEEEEEEeCCccccc--EEEEeEccccCCCCCCeeeE-----eeccCCEEEEEEcCCChhccCCEEEEEEEEEEeC
Confidence 9999999999999887653 12222222222223343322 123456677877621 111 113444433
Q ss_pred CccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEec
Q psy12425 330 SREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMT 384 (591)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~ 384 (591)
+. ........+....+.|.+|.+...|.|++.|.|..| ...+..+.+..
T Consensus 240 ~~-----~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T 288 (290)
T 3l5i_A 240 IG-----NETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTT 288 (290)
T ss_dssp TS-----CCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEEC
T ss_pred CC-----CeEEEEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeec
Confidence 21 112333455556899999999999999999999999 55554455443
No 288
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.68 E-value=9.2e-16 Score=132.27 Aligned_cols=165 Identities=13% Similarity=0.208 Sum_probs=113.3
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccC-----------------CCCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REI-----------------TPSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
....+.+|+.+.|.|.+.+.+ .+.+.|++.. ... ....++.+..+ ....+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 345688999999999999876 6889998843 211 01245555544 346799999999
Q ss_pred cccceEEEEEEEeCCc-----c---eeeeeEEEEecC----CcccC-CCCcccceeecCCCeEEEEEeeecc-CCC-eEE
Q psy12425 357 GVDADEYVCRAVNKGG-----V---KSTKAELIIMTA----PKFNV-PPRFRDTAYFDKGENVVVKIPFTGY-PKP-KIT 421 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g-----~---~~~~~~l~v~~~----p~~~~-~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~ 421 (591)
.+|+|.|.|.+.|..| . ......|.|... |.+.. .+. ..+..|+.+.|.|.+.|. |.+ .+.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~----~~~~~g~~v~L~C~~~g~~P~p~~v~ 163 (225)
T 1op3_H 88 VEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPS----SKSTSGGTAALGCLVKDYFPEPVTVS 163 (225)
T ss_dssp GGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCC----TTCCCCCEEEEEEEEEEEBSSCCEEE
T ss_pred hhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEeccc----ccccCCCcEEEEEEEEeEECCCeEEE
Confidence 9999999999999865 1 123467777652 33221 111 124579999999999986 776 999
Q ss_pred EeeCCeEeeecc-ceEEEecC---CeeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 422 WYRDNEVIESGG-HFHVETSE---RHAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 422 W~~~~~~~~~~~-~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
|++++..+.... ......++ ....|.|.....+| |.|+|.|.|..+.
T Consensus 164 W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 214 (225)
T 1op3_H 164 WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 214 (225)
T ss_dssp CCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGT
T ss_pred EecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCC
Confidence 999986532110 00111111 13468999998888 9999999997654
No 289
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.68 E-value=2e-16 Score=141.00 Aligned_cols=203 Identities=15% Similarity=0.201 Sum_probs=115.0
Q ss_pred ccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCC
Q psy12425 255 IEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREIT 334 (591)
Q Consensus 255 ~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~ 334 (591)
...+.+.|.|.|.+..|....+ ....+...+..+.+.+|+.+.|.|.+.+ +.+.+.|++......
T Consensus 4 ~~~~~~~y~~~~~~~~g~~~~~--------------~~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~ 68 (270)
T 3qib_D 4 ERADLIAYLKQATKGGGGSGGG--------------GGMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNE 68 (270)
T ss_dssp --------------------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCC
T ss_pred hhhhHHHHHHHHhccCCccccc--------------cceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCC
Confidence 3457789999998876643211 1233444455677899999999999866 678999988321100
Q ss_pred --------CC---------C-ceEEEE-eCCeEEEEEcceecccceEEEEEEEeCCc----ceeeeeEEEEecCCcccCC
Q psy12425 335 --------PS---------A-RHHIFA-EGDTYTLIINSVYGVDADEYVCRAVNKGG----VKSTKAELIIMTAPKFNVP 391 (591)
Q Consensus 335 --------~~---------~-~~~~~~-~~~~~~l~i~~~~~~d~g~y~c~a~n~~g----~~~~~~~l~v~~~p~~~~~ 391 (591)
.. . ++.+.. .....+|.|.+++.+|+|.|.|.+.+..+ .......+.|........+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~ 148 (270)
T 3qib_D 69 FKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFP 148 (270)
T ss_dssp EEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBC
T ss_pred cEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccC
Confidence 00 0 333332 23466899999999999999999997432 2234456777652221112
Q ss_pred CCcc----cceeecCCCeEEEEEeeec-cCCC-eEEEeeCCeEeeeccceEE---E-----ecC---CeeEEEEeccCCC
Q psy12425 392 PRFR----DTAYFDKGENVVVKIPFTG-YPKP-KITWYRDNEVIESGGHFHV---E-----TSE---RHAILTIRDASNV 454 (591)
Q Consensus 392 ~~~~----~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~~~~~~~~~~~~~---~-----~~~---~~~~l~i~~~~~~ 454 (591)
|... ....+..|+.+.|.|.+.+ .|.+ .+.|+++|..+..+..... . .++ -...|.|.....+
T Consensus 149 P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~ 228 (270)
T 3qib_D 149 PEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQ 228 (270)
T ss_dssp CEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHH
T ss_pred CceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhc
Confidence 2110 1112345899999999998 6666 8999999998864322110 0 011 1245778877777
Q ss_pred c-ceeEEEEEEcCCCccce
Q psy12425 455 D-TAPYRVVAENDLGMDSA 472 (591)
Q Consensus 455 ~-~g~y~c~a~n~~g~~~~ 472 (591)
| .|.|+|.|.|.......
T Consensus 229 d~~g~YtC~v~~~~l~~~~ 247 (270)
T 3qib_D 229 NPRNHFRCQVQFYGLSEND 247 (270)
T ss_dssp STTCEEEEEEEECCBCTTS
T ss_pred cCCCeEEEEEEecCCCCcc
Confidence 7 99999999998765543
No 290
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.68 E-value=1.4e-15 Score=129.79 Aligned_cols=72 Identities=15% Similarity=0.177 Sum_probs=58.4
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEEC--CEEe------------ecCCceeEEEeCCeEEEEEcccCCCCceEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKN--GRVV------------QSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 67 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 67 (591)
|..+.+.+|++++|.|.+.+.|.+.+.|+|+ |..+ ....++.+...+...+|.|.+++.+|+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 7789999999999999999988889999984 2221 1124666655666779999999999999999
Q ss_pred EEEEcC
Q psy12425 68 VNLSNS 73 (591)
Q Consensus 68 c~~~n~ 73 (591)
|.+.|.
T Consensus 87 C~~~~~ 92 (210)
T 1lk3_L 87 CQQSWN 92 (210)
T ss_dssp EEECSS
T ss_pred EEEEcC
Confidence 999765
No 291
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=2.6e-16 Score=117.93 Aligned_cols=101 Identities=27% Similarity=0.384 Sum_probs=88.9
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEec--eeeeeEEEEcCcccCceEEEEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG--NTRFTTMAITGLSPGHQYEFRVYAE 557 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~i~~l~~~~~Y~~~v~A~ 557 (591)
.+|.+|.++.+...+.+++.|+|++|..+++..+.+|.|+++......|.... ....+.+++.+|.+++.|.|+|+|.
T Consensus 6 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2yuw_A 6 SGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKAV 85 (110)
T ss_dssp CCSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEeccccCccCEEEECCCCCCCEEEEEEEEE
Confidence 57889998999999999999999998877888899999999988888898873 3467899999999999999999999
Q ss_pred cCCcCCCCCCCcceEEecccccc
Q psy12425 558 NVYGRSDPSTTSDLITTYGELLS 580 (591)
Q Consensus 558 n~~G~~~~s~~~~~~~t~~~~p~ 580 (591)
|.+|.|++|..+..+++.+.+|+
T Consensus 86 n~~G~s~~S~~~~~v~~~~~~P~ 108 (110)
T 2yuw_A 86 NAAGASEPKYYSQPILVKESGPS 108 (110)
T ss_dssp ETTEECCCEECSSCEECCCCCCC
T ss_pred cCCcCCCCcCCCCCEEecCCCCC
Confidence 99999999988877787766554
No 292
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.68 E-value=3.5e-16 Score=132.82 Aligned_cols=170 Identities=11% Similarity=0.160 Sum_probs=109.3
Q ss_pred eccccc-eeccccEEEEEEEcCCC----CCeeEEecCCccCCCCCc-eEEEEeCC----eEEEEEcceecccceEEEEEE
Q psy12425 298 PLRNAN-AIQNHNAQFQCTITGCP----KPTISWLKGSREITPSAR-HHIFAEGD----TYTLIINSVYGVDADEYVCRA 367 (591)
Q Consensus 298 ~~~~~~-~~~g~~~~l~c~~~~~p----~~~v~W~~~~~~~~~~~~-~~~~~~~~----~~~l~i~~~~~~d~g~y~c~a 367 (591)
++.... +..|+.+.|.|.+.+.+ .+.|.|++++..+..... ......++ ...|.|.+++.+|+|.|+|.|
T Consensus 8 ~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 87 (207)
T 2vol_A 8 PPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRV 87 (207)
T ss_dssp CCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEE
T ss_pred CcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEE
Confidence 334334 78999999999998874 348999998876543210 00011111 236999999999999999999
Q ss_pred EeCCcceeeeeEE----EEecCCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeCCeEeeeccceEEE-ec
Q psy12425 368 VNKGGVKSTKAEL----IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRDNEVIESGGHFHVE-TS 440 (591)
Q Consensus 368 ~n~~g~~~~~~~l----~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~~~~~~~~~~-~~ 440 (591)
.|..+.......+ .+..+|.+...+.... ...|+.+.|.|.+.|. |. +.+.|+++|..+......... ..
T Consensus 88 ~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~---~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 164 (207)
T 2vol_A 88 NSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKE---QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDT 164 (207)
T ss_dssp ECTTCSSCEEEEECCCCCCCBCCEEEEECCCTG---GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECT
T ss_pred EccCCCCceEEEeccCCCCCcCCeEEEeCCCHH---HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECC
Confidence 9988754222222 3344555433222111 2358999999999985 54 389999999987533221111 11
Q ss_pred CC----eeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 441 ER----HAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 441 ~~----~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
+. ...|.|.....+|.|.|+|.|.|.....
T Consensus 165 ~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~~ 198 (207)
T 2vol_A 165 DGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLHN 198 (207)
T ss_dssp TSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSGG
T ss_pred CCCEEEEEEEEECHHHcCCCCEEEEEEECCCCCC
Confidence 11 2345566665667999999999986543
No 293
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.68 E-value=1.8e-15 Score=129.66 Aligned_cols=73 Identities=12% Similarity=0.125 Sum_probs=59.1
Q ss_pred ceeeeecCCeEEEEEEeccCCCceEEEEEC--CEEee------------cCCceeEEEeCCeEEEEEcccCCCCceEEEE
Q psy12425 3 NALYIPEGDNTKVKIFYAGDQPMEVSLTKN--GRVVQ------------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTV 68 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c 68 (591)
..+.+.+|++++|.|.+.+.|.+.+.|+|. +.... ...++.+.......+|.|.+++.+|+|.|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (213)
T 3mj8_L 8 PLVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYC 87 (213)
T ss_dssp SEEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CcEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEE
Confidence 388999999999999999999999999992 22110 2346666666777899999999999999999
Q ss_pred EEEcCCe
Q psy12425 69 NLSNSSG 75 (591)
Q Consensus 69 ~~~n~~g 75 (591)
.|.|..|
T Consensus 88 ~~~~~~~ 94 (213)
T 3mj8_L 88 QSWDGTN 94 (213)
T ss_dssp EEEETTT
T ss_pred EeccCCc
Confidence 9987644
No 294
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.68 E-value=1.1e-15 Score=130.92 Aligned_cols=175 Identities=13% Similarity=0.135 Sum_probs=109.4
Q ss_pred ccccceeccccEEEEEEEcCC--CCCeeEEecCCc--cC----------------CCCCceEEEEeCCeEEEEEcceecc
Q psy12425 299 LRNANAIQNHNAQFQCTITGC--PKPTISWLKGSR--EI----------------TPSARHHIFAEGDTYTLIINSVYGV 358 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~~~--~~----------------~~~~~~~~~~~~~~~~l~i~~~~~~ 358 (591)
+..+.+.+|+.+.|.|.+.+. +.+.+.|++... .. ....++.+...+...+|.|.+++.+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTE 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGG
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcc
Confidence 345678899999999999763 467899987321 10 0124555656667778999999999
Q ss_pred cceEEEEEEEeCCcc----eeeeeEEEEe----cCCcccCCCCcccceeecCCCeEEEEEeeeccCC--CeEEEeeCCeE
Q psy12425 359 DADEYVCRAVNKGGV----KSTKAELIIM----TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK--PKITWYRDNEV 428 (591)
Q Consensus 359 d~g~y~c~a~n~~g~----~~~~~~l~v~----~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~--~~v~W~~~~~~ 428 (591)
|+|.|.|.+.|..+. ......|.|. .+|.+...+ ....+..|+.+.|.|.+.+.++ ..+.|++++..
T Consensus 86 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~---~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~ 162 (215)
T 3nl4_H 86 DTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLA---PCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLT 162 (215)
T ss_dssp GCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEEC---CCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred cCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEec---CCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEE
Confidence 999999999998653 3344567776 233332111 1123457999999999998644 35779999875
Q ss_pred eeeccceEEEecCC-eeEEEEeccCCCcceeEEEEEEcCCCccceEEEEE
Q psy12425 429 IESGGHFHVETSER-HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 429 ~~~~~~~~~~~~~~-~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
+...........+. ........+...| |.|+|.|.|..|.......+.
T Consensus 163 ~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 163 NGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp TTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred CCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 43222111221111 1221224466667 999999999988765555443
No 295
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=2.1e-16 Score=122.22 Aligned_cols=87 Identities=22% Similarity=0.422 Sum_probs=77.2
Q ss_pred CCceeeeecCCeEEEEEEeccCCCceEEEEECC----------------------------EEe-ecCCceeEEEeCCeE
Q psy12425 1 MPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG----------------------------RVV-QSDDRFKFTVLDDYI 51 (591)
Q Consensus 1 ~p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~----------------------------~~~-~~~~~~~~~~~~~~~ 51 (591)
+|+++.|.+|+++.|.|.+.|.|.|.|.|+|++ ..+ ....++.+...+...
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s 103 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRS 103 (139)
T ss_dssp CCCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEE
T ss_pred CCCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEE
Confidence 588999999999999999999999999999999 555 344677777777778
Q ss_pred EEEEcccCCCCceEEEEEEEcCCeeeEEEEEEEEec
Q psy12425 52 IIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITG 87 (591)
Q Consensus 52 ~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~l~v~~ 87 (591)
.|.|.+++++|+|.|+|.|.|..|....++.|.|.+
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~d 139 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVID 139 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEECC
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEEC
Confidence 999999999999999999999999999999988863
No 296
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.67 E-value=3.9e-16 Score=116.88 Aligned_cols=101 Identities=28% Similarity=0.343 Sum_probs=86.8
Q ss_pred CCCCCCCCCee-eeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEc
Q psy12425 480 DRPDPPQFPTV-EDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAEN 558 (591)
Q Consensus 480 ~~p~~p~~~~~-~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n 558 (591)
.+|.+|..+.+ ...+.+++.|+|++|..+++..+.+|.|+++......|..+.......++|.+|.+++.|.|+|+|.|
T Consensus 7 ~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2crz_A 7 GPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAAN 86 (110)
T ss_dssp CCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEEC
T ss_pred CCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEeCCcEEEEECCcCCCCEEEEEEEEEc
Confidence 57899999998 56788999999998887888899999999998777889888777788999999999999999999999
Q ss_pred CCcCCCCCCCcceEEeccccccC
Q psy12425 559 VYGRSDPSTTSDLITTYGELLSG 581 (591)
Q Consensus 559 ~~G~~~~s~~~~~~~t~~~~p~~ 581 (591)
..|.|.+|..+.+ +|...+|..
T Consensus 87 ~~G~g~~S~~~~~-~T~~~~P~~ 108 (110)
T 2crz_A 87 KMGFGPFSEKCDI-TTAPGSGPS 108 (110)
T ss_dssp SSCBCCCCCCEEE-ECCCSCCCC
T ss_pred CCccCCCCCcccc-ccCCCCCCC
Confidence 9999999988655 555545443
No 297
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.67 E-value=1.7e-16 Score=121.61 Aligned_cols=114 Identities=25% Similarity=0.515 Sum_probs=97.4
Q ss_pred CCccceEEEEEecCCCCCCCCC--eeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEe---ceeeeeEEEE
Q psy12425 467 LGMDSAIVKIQISDRPDPPQFP--TVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV---GNTRFTTMAI 541 (591)
Q Consensus 467 ~g~~~~~~~~~v~~~p~~p~~~--~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~---~~~~~~~~~i 541 (591)
.|..+.++.+.+..+|.+|.++ .+...+.+++.|+|.+| .+++.++.+|+|+++... ..|... .......++|
T Consensus 3 ~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~~~sv~l~W~~p-~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~v 80 (121)
T 1wf5_A 3 SGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKP-FDGNSPLIRYILEMSENN-APWTVLLASVDPKATSVTV 80 (121)
T ss_dssp CCCCCCCCCSSCCCCCCCCSSCEEEECSSSTTEEEEECCCC-CCCSSCEEEEEEEEECTT-CCCEEEESSCCTTCCEEEE
T ss_pred CCcccceEEEEEeeCCccCCCcceeeEeccCCEEEEEEcCC-CCCCCcceEEEEEEEcCC-CCceEeEcccCCCccEEEE
Confidence 5777788888999999999999 88888899999999987 567779999999998765 778765 2445678999
Q ss_pred cCcccCceEEEEEEEEcCCcCCCCCCCcceEEeccccccCC
Q psy12425 542 TGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTYGELLSGM 582 (591)
Q Consensus 542 ~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~~~~p~~~ 582 (591)
.+|.|++.|.|+|+|.|..|.|.+|..+..++|++.+|..+
T Consensus 81 ~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~~P~~~ 121 (121)
T 1wf5_A 81 KGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPESGPSSG 121 (121)
T ss_dssp ESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCCSSCCC
T ss_pred CCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCCCCCCC
Confidence 99999999999999999999999999876778887777653
No 298
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.67 E-value=4.7e-15 Score=127.54 Aligned_cols=171 Identities=15% Similarity=0.206 Sum_probs=115.6
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccC-----------------CCCCceEEEEeC--CeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REI-----------------TPSARHHIFAEG--DTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~-----------------~~~~~~~~~~~~--~~~~l~i~~~~ 356 (591)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. ... ....++.+..+. ...+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 456788999999999998875 4789999843 111 012355555442 46799999999
Q ss_pred cccceEEEEEEEeCCc------ceeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEee
Q psy12425 357 GVDADEYVCRAVNKGG------VKSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYR 424 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~ 424 (591)
.+|+|.|.|.+.+..| .......|.|.. +|.+...+ ....+..|+.+.|.|.+.+. |.+ .+.|++
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~---~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 164 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLV---SCENSNPSSTVAVGCLAQDFLPDSITFSWKY 164 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEE---CTTCCCSSSEEEEEEEEEEEBSSCCEEEEEE
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEec---CCcccCCCCcEEEEEEEEEEeCCCeEEEeEc
Confidence 9999999999998753 112345777763 23322111 01124679999999999987 777 999999
Q ss_pred -CCeEeeeccceE-EEecC---CeeEEEEeccCC--CcceeEEEEEEcCCCccceE
Q psy12425 425 -DNEVIESGGHFH-VETSE---RHAILTIRDASN--VDTAPYRVVAENDLGMDSAI 473 (591)
Q Consensus 425 -~~~~~~~~~~~~-~~~~~---~~~~l~i~~~~~--~~~g~y~c~a~n~~g~~~~~ 473 (591)
+|..+.....+. ....+ ..+.|+|..... +|.|.|+|.|.|..|.....
T Consensus 165 ~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 165 KNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp TTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred cCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 887764310000 00011 135678877776 78999999999998876443
No 299
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=9.2e-16 Score=116.68 Aligned_cols=88 Identities=17% Similarity=0.325 Sum_probs=79.8
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
+..+.+.+|+++.|.|.+.|.|.|.+.|+|+|..+. ..++.+...+...+|.|.+++.+|+|.|+|.|.|..|..+..+
T Consensus 31 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~ 109 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATI 109 (118)
T ss_dssp SSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEE
T ss_pred CCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEE
Confidence 467899999999999999999999999999999997 4567777777778999999999999999999999999999999
Q ss_pred EEEEecCCC
Q psy12425 82 TINITGLPG 90 (591)
Q Consensus 82 ~l~v~~~p~ 90 (591)
.|.|...|.
T Consensus 110 ~l~V~~~P~ 118 (118)
T 2e7c_A 110 RIRVVEKAG 118 (118)
T ss_dssp EEEEECCCC
T ss_pred EEEEEcCCC
Confidence 999998763
No 300
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=4.7e-16 Score=113.41 Aligned_cols=85 Identities=22% Similarity=0.236 Sum_probs=76.9
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+ .|.+.+.|+|||..+..+.++++...+....|.|.+++.+|+|.|+|.|.|. ..+.++
T Consensus 14 ~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a 89 (100)
T 2yuz_A 14 LTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTLPA 89 (100)
T ss_dssp CCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCEEE
T ss_pred CCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeEEE
Confidence 567899999999999999 8889999999999999989999888888889999999999999999999998 556778
Q ss_pred EEEEecCCC
Q psy12425 82 TINITGLPG 90 (591)
Q Consensus 82 ~l~v~~~p~ 90 (591)
.|.|..+|.
T Consensus 90 ~L~V~~~P~ 98 (100)
T 2yuz_A 90 KVHVISGPS 98 (100)
T ss_dssp EEEEECCSC
T ss_pred EEEEeCCCC
Confidence 899987764
No 301
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.67 E-value=3.7e-16 Score=120.61 Aligned_cols=116 Identities=29% Similarity=0.315 Sum_probs=95.8
Q ss_pred ceEEEEEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCC--CCceEEece--eeeeEEEEcCccc
Q psy12425 471 SAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP--MSSWIRVGN--TRFTTMAITGLSP 546 (591)
Q Consensus 471 ~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~--~~~~~~~~~--~~~~~~~i~~l~~ 546 (591)
+..+.+.+.++|.+|.++.+...+.+++.|+|.+| .+++..+.+|.|+|+... ...|..... ...+. .+.+|.|
T Consensus 6 s~~~~~~v~~~P~~P~~~~~~~~~~~sv~l~W~p~-~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~-~i~~L~p 83 (127)
T 1uey_A 6 SGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPG-DDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTT-AQLNLSP 83 (127)
T ss_dssp CCCCCCCCCCSCCCCEEEEEECCSSSCEEEEEECC-CCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCE-EEECCCT
T ss_pred cEEEEEEeecCCcCCCCcEEEEccCCEEEEEEECC-CCCCCCceEEEEEEEECCCCCCccEEEeeeCCCceE-EEecCCC
Confidence 55667788899999999999999999999999976 467779999999998654 467876532 22333 5779999
Q ss_pred CceEEEEEEEEcCCcCCCCCCCcceEEeccccccCCCCCcee
Q psy12425 547 GHQYEFRVYAENVYGRSDPSTTSDLITTYGELLSGMEAPISL 588 (591)
Q Consensus 547 ~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~~~~p~~~~~~~~~ 588 (591)
++.|.|+|+|.|..|.|.+|..+..++|.+.+|..+|..+..
T Consensus 84 ~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~ 125 (127)
T 1uey_A 84 YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPS 125 (127)
T ss_dssp TCEECCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCCC
T ss_pred CCEEEEEEEEEeCCccCCccccccceEcCCCCCCCCCceeEe
Confidence 999999999999999999999876788998899888877754
No 302
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.67 E-value=2.1e-16 Score=117.84 Aligned_cols=100 Identities=21% Similarity=0.296 Sum_probs=84.8
Q ss_pred EEEecCCCCCCCCCeeeeecCCeeEEEeeccccCC---Ccc-eeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceE
Q psy12425 475 KIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDG---GSN-ITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQY 550 (591)
Q Consensus 475 ~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~---~~~-~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y 550 (591)
.+.+..+|.+|..+.+..++.++++|+|++|.+++ +.. |..|.|+........|..+.....+.+++.+|.|++.|
T Consensus 9 ~~~~~~pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~~~~t~~~v~gL~p~t~Y 88 (120)
T 1wfu_A 9 EPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLY 88 (120)
T ss_dssp CCTTCCCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEE
T ss_pred EEEeeCCCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEecCCccEEEECCCCCCCEE
Confidence 45666788899888888899999999999998776 666 99999996555668898886666678999999999999
Q ss_pred EEEEEEEcCCcCCCCCCCcceEEe
Q psy12425 551 EFRVYAENVYGRSDPSTTSDLITT 574 (591)
Q Consensus 551 ~~~v~A~n~~G~~~~s~~~~~~~t 574 (591)
.|||+|.|..|.|++|..+.+.|.
T Consensus 89 ~frV~A~n~~G~s~~S~~~~~~T~ 112 (120)
T 1wfu_A 89 KFRLKVTSPSGEYEYSPVVSVATT 112 (120)
T ss_dssp EEEEEEECSSSCEEECCCEEEECC
T ss_pred EEEEEEECCCCCCCCCccEeeEcC
Confidence 999999999999999998765443
No 303
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.67 E-value=5.3e-16 Score=147.67 Aligned_cols=214 Identities=15% Similarity=0.137 Sum_probs=140.9
Q ss_pred ceecccceEEEEEEEeCCcceeeee-EEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCC----C--eEEEeeCC
Q psy12425 354 SVYGVDADEYVCRAVNKGGVKSTKA-ELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK----P--KITWYRDN 426 (591)
Q Consensus 354 ~~~~~d~g~y~c~a~n~~g~~~~~~-~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~----~--~v~W~~~~ 426 (591)
+....+.|.|.|.+.|..+...... ......+|. +|... ........+.|.+....... . .|.|...+
T Consensus 301 ~S~s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPs---aP~nl--~~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~ 375 (536)
T 3fl7_A 301 HTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPS---APHYL--TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCW 375 (536)
T ss_dssp SEECCCTTCSSCEECTTCBCCTTCCTTSCCBCCCC---CBSCE--EEECCTTSEEEEECCBSCCCSCSCCEEEEEEEEEC
T ss_pred CCCCCCCCccEEEEeccccccCCCccccccccCCC---cccce--EEEecCCEEEEEEeCCcCCCCCceeEEEEEEEecc
Confidence 3456678999999999888664321 111122222 22211 11234566777776533211 1 34454321
Q ss_pred eEee----eccceEE---EecCCeeEEEEeccCCCcceeEEEEEEcCCCc---cceEEEEEecCCCCCCCCCeeeeecCC
Q psy12425 427 EVIE----SGGHFHV---ETSERHAILTIRDASNVDTAPYRVVAENDLGM---DSAIVKIQISDRPDPPQFPTVEDIGHD 496 (591)
Q Consensus 427 ~~~~----~~~~~~~---~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~---~~~~~~~~v~~~p~~p~~~~~~~~~~~ 496 (591)
.... ....... ........++|.+|.+...|.|++.|.|..|. ...+..+.+...|.+|..+.+...+.+
T Consensus 376 ~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~~~~~~~s~t 455 (536)
T 3fl7_A 376 PESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTT 455 (536)
T ss_dssp C-CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCCEEEEEECCC-
T ss_pred CCCCcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCCCCceeeccCC
Confidence 1100 0011111 11234678999999999999999999999997 446778888888889998888888899
Q ss_pred eeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEE
Q psy12425 497 SLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 573 (591)
Q Consensus 497 ~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~ 573 (591)
++.|+|++|. +.++.+.+|+|.|+...............+.++|.+|.|++.|.|+|+|.|.+|.|++|....+.|
T Consensus 456 SV~LsW~pP~-~~ng~I~~Y~V~y~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T 531 (536)
T 3fl7_A 456 SLSVSWSIPP-PQQSRVWKYEVTYRKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQT 531 (536)
T ss_dssp CCEEEEECCT-TTTTTCSEEEEEEEEC--CCCCEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEEC
T ss_pred eEEEEEECCc-CCCCcccEEEEEEEECCCCceEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEe
Confidence 9999999885 445589999999987765422233455667999999999999999999999999999998876544
No 304
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.67 E-value=1.3e-15 Score=112.94 Aligned_cols=87 Identities=23% Similarity=0.344 Sum_probs=80.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+.|.|.+.+.|+|++..+....++.+...+...+|.|.+++.+|+|.|+|.|.|..|..+..+
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~ 94 (103)
T 3qp3_A 15 MRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYA 94 (103)
T ss_dssp CCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEE
Confidence 56788999999999999999999999999999999888888888877888999999999999999999999999999999
Q ss_pred EEEEecC
Q psy12425 82 TINITGL 88 (591)
Q Consensus 82 ~l~v~~~ 88 (591)
.|.|...
T Consensus 95 ~l~V~~~ 101 (103)
T 3qp3_A 95 TLDVTGG 101 (103)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9988754
No 305
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.66 E-value=9.9e-17 Score=119.09 Aligned_cols=97 Identities=39% Similarity=0.672 Sum_probs=86.0
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEec--eeeeeEEEEcCcccCceEEEEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG--NTRFTTMAITGLSPGHQYEFRVYAE 557 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~i~~l~~~~~Y~~~v~A~ 557 (591)
.+|.+|..+.+..++.+++.|+|.+|..++|.++.+|.|+++..+...|..+. ......+++.+|.+++.|.|||+|.
T Consensus 9 ~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 88 (112)
T 1bpv_A 9 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAK 88 (112)
T ss_dssp CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEE
T ss_pred CCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecccCccCEEEECCCCCCCEEEEEEEEE
Confidence 67899999999999999999999998888888999999999988778898763 3456789999999999999999999
Q ss_pred cCCcC-CCCCCCcceEEecc
Q psy12425 558 NVYGR-SDPSTTSDLITTYG 576 (591)
Q Consensus 558 n~~G~-~~~s~~~~~~~t~~ 576 (591)
|..|. |++|..+..+++.+
T Consensus 89 N~~G~~s~~S~~~~~~t~~~ 108 (112)
T 1bpv_A 89 NAAGAISPPSEPSDAITCRD 108 (112)
T ss_dssp CTTSCEEEEEEEEEEECSCH
T ss_pred ECCCCCCCCCCCCCCEEeCC
Confidence 99997 99998877776664
No 306
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.66 E-value=2.7e-15 Score=134.18 Aligned_cols=246 Identities=13% Similarity=0.016 Sum_probs=142.6
Q ss_pred eecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEEEEEe
Q psy12425 7 IPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTINIT 86 (591)
Q Consensus 7 v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~l~v~ 86 (591)
+..|++|+|.|.+... . .|.|.+||..... . ...+|.|.+++..|+|.|+|.+ .|.......+.|.
T Consensus 18 ~~~G~~v~l~C~~~~~-~-~i~W~~~~~~~~~-------~--~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~v~ 83 (306)
T 3d85_D 18 DAPGEMVVLTCDTPEE-D-GITWTLDQSSEVL-------G--SGKTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLLLH 83 (306)
T ss_dssp SCCCEEEEEECSSSCC-S-SCEEEETTCCCCC-------E--ESSEEEEEECSGGGCEEEEEEE---TTEEEEEEEEEEE
T ss_pred CccCCcEEEECCCCCC-C-cCEEEECCccccC-------C--CCCEEEEEecCcCCCceEEEee---CCcccceEEEEEE
Confidence 3479999999998743 3 8999999884321 1 2238999999999999999999 3455444444443
Q ss_pred c-------------CCCCCCCCcceEEe--cC-ceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEe-ecCcce--
Q psy12425 87 G-------------LPGPPIGPLDVSEI--TK-HTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST-TCHDTT-- 147 (591)
Q Consensus 87 ~-------------~p~~p~~~~~~~~~--~~-~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~-~~~~~~-- 147 (591)
. .+.+|.. ..+.-. .. ..++++|.+... ......|...+.. ....|..+.. ......
T Consensus 84 ~~~~~~~~t~i~~~~~~pp~~-~~lsC~~~~~~~~~~C~W~pg~~--~~l~~~~~~~r~~-~~~~~~~C~~~~~~~~~c~ 159 (306)
T 3d85_D 84 KKEDGIWSTDILKDQKEPKNK-TFLRCEAKNYSGRFTCWWLTTIS--TDLTFSVKSSRGS-SDPQGVTCGAATLSAERVR 159 (306)
T ss_dssp EEETTEECCCSSCCCC---CC-CCCEEEBSSSSSEEEEEEEESCC--SSEEEEEEEEECS-SSCEEEEECCCEEEEEEEC
T ss_pred eccCCcceeeeecccCCCCCC-CcceEEcCCcccCcEEEecCCCC--CceeEEEEEEecC-CCCcceECCCCCCCcccee
Confidence 2 2333332 234332 22 389999997653 2223345443321 1222333221 000011
Q ss_pred -------EE----EcCCcC----CcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecC-CeEEEEEe
Q psy12425 148 -------FI----VQGLTE----GQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGG-DFVNLSWD 211 (591)
Q Consensus 148 -------~~----i~~l~~----~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~v~l~w~ 211 (591)
+. ...+-+ ...|.|+|.|.|..|.......+... ....|.+|..+.+..... ..+.|+|.
T Consensus 160 v~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~~f~~~----~iVkPdPP~~l~~~~~~~~~~l~vsW~ 235 (306)
T 3d85_D 160 GDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIR----DIIKPDPPKNLQLKPLKNSRQVEVSWE 235 (306)
T ss_dssp --CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEEEECHH----HHBCCCCCEEEEEEEC----CEEEEEE
T ss_pred ecCccccceeeeeeccccccccccEEEEEEEEEEccCCccccceEEEeh----hcEecCCCceEEEEEecCCCcEEEEEc
Confidence 11 122222 24799999999998854333211111 123677887777776433 78999999
Q ss_pred cCCCCCC---cceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCc
Q psy12425 212 KPLDDGG---SRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 279 (591)
Q Consensus 212 ~~~~~~~---~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~ 279 (591)
+|...+. .....|.|.++..+...|..... ....++.+. .+..|.++++|.+..|.+.+|..+
T Consensus 236 ~P~~~~~p~~~~~L~Y~vryr~~~~~~~~~~~~--~~~ts~~l~---~~~~Y~vqVRa~~~~~~G~WSeWS 301 (306)
T 3d85_D 236 YPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVF--TDKTSATVI---CRKNASISVRAQDRYYSSSWSEWA 301 (306)
T ss_dssp CCTTSCSCTTTSCEEEEEEEECC------CEEE--ESSSEEEEC---CCSSCEEEEEEEESSSCCCCCCCE
T ss_pred CCCCCcCCCceeeEEEEEEEEECCCCccEEEee--ccccEEEEe---CCCeEEEEEEeccCCCCCCCCCCC
Confidence 9754321 23478999999877655654422 244566664 489999999999988877777654
No 307
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.66 E-value=3.1e-16 Score=109.41 Aligned_cols=80 Identities=18% Similarity=0.321 Sum_probs=70.5
Q ss_pred ceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEE
Q psy12425 3 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 82 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~ 82 (591)
.++.+.+|+++.|.|.+.+ |.|.|.|+|||+.|..+.++++...+...+|.|.+++.+|+|.|+|.|.|. ..++.
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~a~ 78 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD----SRIFL 78 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT----CEEEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE----EEEEE
Confidence 4789999999999999965 888999999999999999999988888899999999999999999998654 45567
Q ss_pred EEEec
Q psy12425 83 INITG 87 (591)
Q Consensus 83 l~v~~ 87 (591)
|.|..
T Consensus 79 l~V~e 83 (84)
T 2lu7_A 79 VSVEE 83 (84)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 77754
No 308
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.66 E-value=4.1e-16 Score=116.97 Aligned_cols=101 Identities=29% Similarity=0.428 Sum_probs=87.7
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEec--eeeeeEEEEcCcccCceEEEEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG--NTRFTTMAITGLSPGHQYEFRVYAE 557 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~i~~l~~~~~Y~~~v~A~ 557 (591)
.+|.+|.++++..++.+++.|+|.+|..+++.++.+|.|+++......|.... ......+++.+|.+++.|.|+|+|.
T Consensus 7 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 86 (111)
T 1x5y_A 7 GPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGV 86 (111)
T ss_dssp SCCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEEE
T ss_pred CCCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEEEE
Confidence 57888999999999999999999998877777799999999988878898763 2456789999999999999999999
Q ss_pred cCCcCCCCCCCcceEEecccccc
Q psy12425 558 NVYGRSDPSTTSDLITTYGELLS 580 (591)
Q Consensus 558 n~~G~~~~s~~~~~~~t~~~~p~ 580 (591)
|.+|.|.+|..+..+++.+.+|+
T Consensus 87 n~~G~s~~S~~~~~v~~~~~~P~ 109 (111)
T 1x5y_A 87 NIAGRSEPATLLQPVTIRESGPS 109 (111)
T ss_dssp ETTEECCCCCCSSCBCCCCCCCC
T ss_pred cCCcCCCCccCCCCEEecCCCCC
Confidence 99999999998877777765554
No 309
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.66 E-value=2e-15 Score=132.33 Aligned_cols=177 Identities=14% Similarity=0.210 Sum_probs=116.6
Q ss_pred EEeeccccceeccccEEEEEEEcCCCCCeeEEecCC--cc--------------CCCCCceEEEE-eCCeEEEEEcceec
Q psy12425 295 IIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGS--RE--------------ITPSARHHIFA-EGDTYTLIINSVYG 357 (591)
Q Consensus 295 ~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~--~~--------------~~~~~~~~~~~-~~~~~~l~i~~~~~ 357 (591)
+...+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. .. .....++.+.. .....+|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 334455677899999999999999999999999822 10 01123445443 34567899999999
Q ss_pred ccceEEEEEEEeCCc------ceeeeeEEEEecCCcccCCCCcc----cceeecCCCeEEEEEeeecc-CCC-eEEEeeC
Q psy12425 358 VDADEYVCRAVNKGG------VKSTKAELIIMTAPKFNVPPRFR----DTAYFDKGENVVVKIPFTGY-PKP-KITWYRD 425 (591)
Q Consensus 358 ~d~g~y~c~a~n~~g------~~~~~~~l~v~~~p~~~~~~~~~----~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~ 425 (591)
+|+|.|.|.+.|..| .......|.|........+|... ....+..|+.+.|.|.+.|. |++ .+.|+++
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~ 163 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVN 163 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEEC
Confidence 999999999999433 22344567776521111112110 11123458999999999985 444 7899999
Q ss_pred CeEeeeccceEEEe-------cCC----eeEEEEeccCCCc-ceeEEEEEEcCCCccc
Q psy12425 426 NEVIESGGHFHVET-------SER----HAILTIRDASNVD-TAPYRVVAENDLGMDS 471 (591)
Q Consensus 426 ~~~~~~~~~~~~~~-------~~~----~~~l~i~~~~~~~-~g~y~c~a~n~~g~~~ 471 (591)
|..+.......... .+. ...|.|.....+| .|.|+|.|.|......
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 164 GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp TEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 99886432211100 111 2467888777777 6799999999866544
No 310
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.66 E-value=6.1e-16 Score=112.80 Aligned_cols=93 Identities=28% Similarity=0.383 Sum_probs=83.4
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCC--ceEEEEeCCeEEEEEcceecccceEEEEEEE
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSA--RHHIFAEGDTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
.||.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.+...+...+|.|.++..+|+|.|+|.|.
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 46888888888899999999999999999999999999999887654 5677777888899999999999999999999
Q ss_pred eCCcceeeeeEEEEe
Q psy12425 369 NKGGVKSTKAELIIM 383 (591)
Q Consensus 369 n~~g~~~~~~~l~v~ 383 (591)
|..|.....+.|.|.
T Consensus 84 N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred ECCCEEEEEEEEEEE
Confidence 999999888888875
No 311
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.66 E-value=2.2e-15 Score=110.04 Aligned_cols=87 Identities=22% Similarity=0.290 Sum_probs=80.1
Q ss_pred CceeeeecCCeEEEEEEeccC-CCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGD-QPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|.++.+.+|+++.|.|.+.|. |.+.+.|+|++..+....++.+...+....|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 8 ~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 87 (97)
T 2bk8_A 8 IMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSY 87 (97)
T ss_dssp CCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEE
Confidence 678999999999999999996 9999999999999988888888777777899999999999999999999999999998
Q ss_pred EEEEEecC
Q psy12425 81 FTINITGL 88 (591)
Q Consensus 81 ~~l~v~~~ 88 (591)
+.|.|.+.
T Consensus 88 ~~l~V~~~ 95 (97)
T 2bk8_A 88 AELFVKGV 95 (97)
T ss_dssp EEEEETTT
T ss_pred EEEEEEec
Confidence 99988753
No 312
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.66 E-value=1.5e-15 Score=130.16 Aligned_cols=192 Identities=18% Similarity=0.130 Sum_probs=136.1
Q ss_pred cCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCC-cCCcEEEEEEEE
Q psy12425 87 GLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGL-TEGQEYLFHVMA 165 (591)
Q Consensus 87 ~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l-~~~~~y~~~~~a 165 (591)
.+|.+|.+ +.+......++.|+|.++...++ ...|.+.++......+...........+.+.+| .+++.|.|+|.|
T Consensus 6 ~pP~~P~~-l~~~~~~~~sv~l~W~~p~~~~~--~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A 82 (215)
T 1bqu_A 6 LPPEKPKN-LSCIVNEGKKMRCEWDGGRETHL--ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEA 82 (215)
T ss_dssp CCCCCCEE-EEEEEETTSCCEEEEECCSCCSS--CCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEE
T ss_pred CCCCCCEe-eEeEECCCCcEEEEcCCCCCCCC--CceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEEE
Confidence 45555555 45566666899999999885543 368999987654322222222345678999999 899999999999
Q ss_pred EccCCCCCCCCccCcccccCCCCCCCCCCCCeEEee--cCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEee-
Q psy12425 166 VNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQV--GGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVA- 242 (591)
Q Consensus 166 ~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~- 242 (591)
.|..|.+..... ... ......|.+|..+.+... ..+++.|+|..|...+ ..+.+|.|+++..+...|..+...
T Consensus 83 ~n~~G~~~s~~~-~~~--~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~y~~~~~~~~~~~~~~~ 158 (215)
T 1bqu_A 83 ENALGKVTSDHI-NFD--PVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKS-VIILKYNIQYRTKDASTWSQIPPED 158 (215)
T ss_dssp EETTEEEECCCE-EEC--GGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGG-TSCEEEEEEEEETTCSSCEECCGGG
T ss_pred EecccCccCCcE-Eec--ccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCC-cceEEEEEEEccCCCCCceEecccc
Confidence 999987652211 111 111135666766666544 5689999999886544 368999999998877788765431
Q ss_pred -ecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEc
Q psy12425 243 -ICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 285 (591)
Q Consensus 243 -~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~ 285 (591)
......++|.+|.++..|.|+++|.|..|.+.++..+..+.+.
T Consensus 159 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~ 202 (215)
T 1bqu_A 159 TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGI 202 (215)
T ss_dssp GCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEE
T ss_pred ccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccc
Confidence 3356789999999999999999999999988766665554443
No 313
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.66 E-value=7.2e-16 Score=126.97 Aligned_cols=151 Identities=19% Similarity=0.266 Sum_probs=106.1
Q ss_pred ccceeccccEEEEEEEcC-CCCCeeEEecC-CccCC------------CC--CceEEEEeCCeEEEEEcceecccceEEE
Q psy12425 301 NANAIQNHNAQFQCTITG-CPKPTISWLKG-SREIT------------PS--ARHHIFAEGDTYTLIINSVYGVDADEYV 364 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~-~p~~~v~W~~~-~~~~~------------~~--~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 364 (591)
.+.+.+|+++.|.|.+.+ .+.+.|.|+++ +..+. .. .++.+ +....+|.|.+++..|+|.|+
T Consensus 8 ~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G~Y~ 85 (180)
T 2dru_A 8 NVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRGDYY 85 (180)
T ss_dssp EEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCeEEE
Confidence 456789999999999854 44689999984 22110 11 23333 223347999999999999999
Q ss_pred EEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEee-eccCCCeEEEeeCCeEeeeccceEEEecCCe
Q psy12425 365 CRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF-TGYPKPKITWYRDNEVIESGGHFHVETSERH 443 (591)
Q Consensus 365 c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 443 (591)
|.+.+.. .......|.|..++.. |. . ...+..+.|.|.+ .+ |.|.+.|++++..+.. ...
T Consensus 86 C~v~~~~-~~~~~~~L~V~~~~~~---P~----i-~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~---------~~~ 146 (180)
T 2dru_A 86 MRMLHET-EDQWKITMEVYEMVSK---PM----I-YWECSNATLTCEVLEG-TDVELKLYQGKEHLRS---------LRQ 146 (180)
T ss_dssp EEEESSS-EEEEEEEEEEECCCCC---CE----E-EEEGGGTEEEEECSSC-TTCEEEEEETTEEEEE---------ESS
T ss_pred EEEEcCC-eEEEEEEEEEECCCCC---CE----E-EecCCCEEEEEEeCCC-CCCEEEEEECCeECcC---------CCC
Confidence 9998876 5566677888764321 11 1 1234569999999 56 9999999999987741 123
Q ss_pred eEEEEeccCCCcceeEEEEEEcCCCccceEE
Q psy12425 444 AILTIRDASNVDTAPYRVVAENDLGMDSAIV 474 (591)
Q Consensus 444 ~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~ 474 (591)
..|.+.. .+|.|.|+|.|.|..|..+...
T Consensus 147 ~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~ 175 (180)
T 2dru_A 147 KTMSYQW--TNLRAPFKCKAVNRVSQESEME 175 (180)
T ss_dssp SEEEEEC--SCCSSCEEEEEEETTEEEEEEE
T ss_pred CEEEEEE--hhcCccEEEEEecCcCccccce
Confidence 4555533 7899999999999998765544
No 314
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.66 E-value=3.5e-15 Score=131.12 Aligned_cols=177 Identities=16% Similarity=0.202 Sum_probs=116.0
Q ss_pred cccceeccccEEEEEEEcCC--CCCeeEEecCCc--c---C--------------CCCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGC--PKPTISWLKGSR--E---I--------------TPSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~~~--~---~--------------~~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
..+.+.+|+.+.|.|.+.+. +...+.|++... . + ....++.+..+ ....+|.|.+++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (253)
T 3liz_H 8 GGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLK 87 (253)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCC
T ss_pred CCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 45678899999999999763 356899987321 1 0 11235555543 356789999999
Q ss_pred cccceEEEEEEEeCC----cceeeeeEEEEe----cCCcccCCCCcccceeecCCCeEEEEEeeec-cCCC-eEEEeeCC
Q psy12425 357 GVDADEYVCRAVNKG----GVKSTKAELIIM----TAPKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKP-KITWYRDN 426 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~----g~~~~~~~l~v~----~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~~ 426 (591)
.+|+|.|.|.+.+.. +.......|.|. .+|.+...+ ....+..|+.+.|.|.+.+ .|.+ .+.|++++
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~---~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~ 164 (253)
T 3liz_H 88 SEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLA---PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 164 (253)
T ss_dssp GGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEEC---C------CCEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred hhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEec---CCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCC
Confidence 999999999998862 223344567775 233332111 1123456999999999998 6766 89999998
Q ss_pred eEeeeccceEEEecC---CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecC
Q psy12425 427 EVIESGGHFHVETSE---RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 427 ~~~~~~~~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
..+...........+ ..+.|.|.....+| |.|+|.|.|..+.......+.+..
T Consensus 165 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~~ 220 (253)
T 3liz_H 165 LSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPRD 220 (253)
T ss_dssp BCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC-
T ss_pred eecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCcc
Confidence 733111000000101 13678999999999 999999999998777777776653
No 315
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.66 E-value=7.5e-15 Score=127.00 Aligned_cols=178 Identities=14% Similarity=0.214 Sum_probs=114.1
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccC----------------CCCCceEEEEe--CCeEEEEEcceec
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REI----------------TPSARHHIFAE--GDTYTLIINSVYG 357 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~----------------~~~~~~~~~~~--~~~~~l~i~~~~~ 357 (591)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++.. ... ....++.+..+ +...+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 8 GAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 456688999999999998765 6789998843 211 01245665543 3467999999999
Q ss_pred ccceEEEEEEEeCC--cc----eeeeeEEEEecC----CcccCCCCcccceeecCC-CeEEEEEeeecc-CCC-eEEEee
Q psy12425 358 VDADEYVCRAVNKG--GV----KSTKAELIIMTA----PKFNVPPRFRDTAYFDKG-ENVVVKIPFTGY-PKP-KITWYR 424 (591)
Q Consensus 358 ~d~g~y~c~a~n~~--g~----~~~~~~l~v~~~----p~~~~~~~~~~~~~~~~g-~~~~l~c~~~~~-p~~-~v~W~~ 424 (591)
+|+|.|.|.+.+.. +. ......|.|... |.+.... ....+..| +.+.|.|.+.+. |.+ .+.|++
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~---p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~ 164 (232)
T 1dn0_B 88 ADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLV---SCENSPSDTSSVAVGCLAQDFLPDSITFSWKY 164 (232)
T ss_dssp GGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEE---CC------CCSEEEEEEEEEEBSSCCEEEEEE
T ss_pred ccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEec---cccccCCCCCcEEEEEEEEEEeCCCeEEEEEc
Confidence 99999999998422 21 223457777652 2222100 01123467 899999999886 776 999999
Q ss_pred -CCeEeeeccce-EEEecC---CeeEEEEeccCC--CcceeEEEEEEcCCCccceEEEEEecC
Q psy12425 425 -DNEVIESGGHF-HVETSE---RHAILTIRDASN--VDTAPYRVVAENDLGMDSAIVKIQISD 480 (591)
Q Consensus 425 -~~~~~~~~~~~-~~~~~~---~~~~l~i~~~~~--~~~g~y~c~a~n~~g~~~~~~~~~v~~ 480 (591)
+|..+.....+ .....+ ..+.|.|..... +|.|.|+|.|.|..|.......+.+..
T Consensus 165 ~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~~ 227 (232)
T 1dn0_B 165 KNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVIA 227 (232)
T ss_dssp TTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC--
T ss_pred CCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCCC
Confidence 88876431000 000111 135688888876 789999999999998876666555443
No 316
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.66 E-value=6.8e-15 Score=124.34 Aligned_cols=172 Identities=18% Similarity=0.373 Sum_probs=124.1
Q ss_pred cceEEec--CceEEEEecCCCCCCCcceeeEEEEEEecCC-CceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCC
Q psy12425 96 LDVSEIT--KHTCTLHWNPPKYDGGLKVTHYVVERRDISM-PHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMG 172 (591)
Q Consensus 96 ~~~~~~~--~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~ 172 (591)
+.+.... ..++.|+|.+|. +..+..|.|.++.... ..|...........+.+.+|.+++.|.|+|.|.|..|.+
T Consensus 6 l~v~~v~~~~~si~l~W~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~ 82 (201)
T 2ha1_A 6 VFITETPSQPNSHPIQWNAPQ---PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQ 82 (201)
T ss_dssp EECCSCSCCSSCEEEEEECCS---STTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECTTSCE
T ss_pred EEEEecCCCCCEEEEEEeCCC---CCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEeccccc
Confidence 3444555 789999999884 5688999999987654 567766666667899999999999999999999998887
Q ss_pred CCCCc-------cCcccccCCCCCCCC-C----CCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEE
Q psy12425 173 PPLEG-------INPIKAKSPYDKPSP-P----GIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVN 240 (591)
Q Consensus 173 ~~~~~-------~~~~~~~~~~~~p~~-~----~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 240 (591)
..... ............|.+ | ..+.+.....+++.|+|.+| ...+.+|.|.++......|....
T Consensus 83 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p----~~~i~~Y~v~~~~~~~~~~~~~~ 158 (201)
T 2ha1_A 83 EVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA----SDTVSGFRVEYELSEEGDEPQYL 158 (201)
T ss_dssp EEEEEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS----CTTEEEEEEEEEETTTCCCCEEE
T ss_pred CceeEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC----CCCccEEEEEEEECCCCCceeEE
Confidence 54210 011111111011111 1 34567777888999999987 23789999999876544454433
Q ss_pred eeecCCceeeecCcccCCcEEEEEEEEcCCCCCC
Q psy12425 241 VAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSL 274 (591)
Q Consensus 241 ~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~ 274 (591)
........+.|.+|.++..|.|++.|.|..|.+.
T Consensus 159 ~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~ 192 (201)
T 2ha1_A 159 DLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQS 192 (201)
T ss_dssp EEETTCCEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred EcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcc
Confidence 3344568899999999999999999999998765
No 317
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.66 E-value=7.5e-15 Score=126.72 Aligned_cols=83 Identities=14% Similarity=0.219 Sum_probs=55.0
Q ss_pred ccccEEEEEEEcCCCCCeeEEecC-CccCCCCCceEEE--EeCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEE
Q psy12425 306 QNHNAQFQCTITGCPKPTISWLKG-SREITPSARHHIF--AEGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELII 382 (591)
Q Consensus 306 ~g~~~~l~c~~~~~p~~~v~W~~~-~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v 382 (591)
.|+.+.|.|.+.|.|.+.+.|+++ +..+......... .++......+..+...|.|.|+|.|.|..|.....+.|.|
T Consensus 130 ~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v 209 (222)
T 3sbw_C 130 VTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVI 209 (222)
T ss_dssp TTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEe
Confidence 455678889988888899999997 4444332222111 2222222333456779999999999999999999999988
Q ss_pred ecCCcc
Q psy12425 383 MTAPKF 388 (591)
Q Consensus 383 ~~~p~~ 388 (591)
..+|..
T Consensus 210 ~~~p~~ 215 (222)
T 3sbw_C 210 PELPLA 215 (222)
T ss_dssp CCC---
T ss_pred cCCccc
Confidence 766643
No 318
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.65 E-value=9.4e-16 Score=117.07 Aligned_cols=104 Identities=30% Similarity=0.454 Sum_probs=88.4
Q ss_pred EEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCC-CCceEEec---eeeeeEEEEcCcccCceEE
Q psy12425 476 IQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP-MSSWIRVG---NTRFTTMAITGLSPGHQYE 551 (591)
Q Consensus 476 ~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~-~~~~~~~~---~~~~~~~~i~~l~~~~~Y~ 551 (591)
.....+|.+|.++.+..++.+++.|+|.+ ..+++.++.+|.|+++... ...|.... ......++|.+|.+++.|.
T Consensus 12 ~~~~~~P~~P~~~~~~~~~~~sv~l~W~p-~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~ 90 (121)
T 1x4z_A 12 HGRLSPPEAPDRPTISTASETSVYVTWIP-RGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYK 90 (121)
T ss_dssp SSSCCCCCCCCCCEEEECCSSEEEEECCC-CCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEE
T ss_pred cCcCCCCccCCCCEEEEccCCEEEEEEEC-CCCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEEE
Confidence 34457899999999999999999999995 4577788999999999876 57887663 3356799999999999999
Q ss_pred EEEEEEcCCcCCCCCCCcceEEecccccc
Q psy12425 552 FRVYAENVYGRSDPSTTSDLITTYGELLS 580 (591)
Q Consensus 552 ~~v~A~n~~G~~~~s~~~~~~~t~~~~p~ 580 (591)
|+|+|.|.+|.|++|..+..+++.+++|+
T Consensus 91 frV~A~n~~G~s~~S~~~~~v~~~~~~P~ 119 (121)
T 1x4z_A 91 FRVRALNMLGESEPSAPSRPYVVSGSGPS 119 (121)
T ss_dssp EEEEEEETTEECCCCCCCCCEECCSSCCC
T ss_pred EEEEEEcCCCcCCCcCCCCCEEcCCCCCC
Confidence 99999999999999999888888776654
No 319
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.65 E-value=2.8e-13 Score=123.13 Aligned_cols=263 Identities=14% Similarity=0.158 Sum_probs=148.8
Q ss_pred CCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEc-C
Q psy12425 191 SPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQN-E 269 (591)
Q Consensus 191 ~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n-~ 269 (591)
.+|..+.+.......+.|+|.+|.........+|.+.+.. .|.... ....+.+..+.++..|.++++|.. .
T Consensus 5 ~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~----~~~~~~----~~~~~~~~~~~~~~~y~~~V~a~~~~ 76 (314)
T 3bpo_C 5 PPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGD----KQDKKI----APETRRSIEVPLNERICLQVGSQCST 76 (314)
T ss_dssp CCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC------CCCEE----ESSSEEEEECCCSSCEEEEEEECC--
T ss_pred CCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEecc----cCceEe----ccccEEEEEEcCCCcEEEEEEEEecC
Confidence 5677788887788899999999865533456678887654 222111 123456677888999999999954 3
Q ss_pred CCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEE
Q psy12425 270 AGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYT 349 (591)
Q Consensus 270 ~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 349 (591)
.|.+..+.. ....+.. ...........|.|.........+.|...... .....|.+
T Consensus 77 ~~~g~~s~~-~~~~~~~--------------~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~-~~~~~Y~l-------- 132 (314)
T 3bpo_C 77 NESEKPSIL-VEKCISP--------------PEGDPESAVTELQCIWHNLSYMKCSWLPGRNT-SPDTNYTL-------- 132 (314)
T ss_dssp -------CC-EEEEECC--------------CCC-CCSSCEEEEEEEETTTEEEEEEECCC----CCCCEEE--------
T ss_pred CCCCCCCcC-eeeeeec--------------CCCCCCCCCEeceEEECCCCeEEEEECCCCCC-CCCccEEE--------
Confidence 444433222 1111110 00111223456777776665667778653211 00111111
Q ss_pred EEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEe
Q psy12425 350 LIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVI 429 (591)
Q Consensus 350 l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~ 429 (591)
.|.. . +.. -...|..
T Consensus 133 --------------~y~~--~-~~~-------------------------------~~~~C~~----------------- 147 (314)
T 3bpo_C 133 --------------YYWH--R-SLE-------------------------------KIHQCEN----------------- 147 (314)
T ss_dssp --------------EEEE--S-SCS-------------------------------SCEECCC-----------------
T ss_pred --------------EEEe--C-CCC-------------------------------ccccCcC-----------------
Confidence 1110 0 000 0001100
Q ss_pred eeccceEEEecCCeeEEEEeccC----CCcceeEEEEEEcCCCccceE-EEEEec--CCCCCCCCCeeeeecCCeeEEEe
Q psy12425 430 ESGGHFHVETSERHAILTIRDAS----NVDTAPYRVVAENDLGMDSAI-VKIQIS--DRPDPPQFPTVEDIGHDSLALVW 502 (591)
Q Consensus 430 ~~~~~~~~~~~~~~~~l~i~~~~----~~~~g~y~c~a~n~~g~~~~~-~~~~v~--~~p~~p~~~~~~~~~~~~v~l~W 502 (591)
+. .......+.+..+. ....|.+++.|.|..|....+ ..+.+. ..|.+|.++.+. ...+++.|+|
T Consensus 148 -----~~--~~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~~~~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW 219 (314)
T 3bpo_C 148 -----IF--REGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQW 219 (314)
T ss_dssp -----EE--EETTEEEEEEECCC--------CCEEEEEEETTSCSCCEEEEECSSSSEECCCCEEEEEE-EETTEEEEEE
T ss_pred -----ee--cCCCeEEEEECCCCccccceeEEEEEEEEEcCCCceecccEEEehhheEeeCCCCEEEEE-EcCCcEEEEE
Confidence 00 00122333343333 245788999999998876433 334333 358999999887 6788999999
Q ss_pred eccccCCCcceeeEEEEeeeCCCCceEEec--------------eeeeeEEEEcCcccCceEEEEEEEEcC
Q psy12425 503 RAPIWDGGSNITNYIVEKREHPMSSWIRVG--------------NTRFTTMAITGLSPGHQYEFRVYAENV 559 (591)
Q Consensus 503 ~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~--------------~~~~~~~~i~~l~~~~~Y~~~v~A~n~ 559 (591)
++|.. ....+..|+|.|+......|.... ......+.|.+|.|++.|.|+|+|.+.
T Consensus 220 ~~P~~-~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~ 289 (314)
T 3bpo_C 220 ENPQN-FISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTN 289 (314)
T ss_dssp ECCTT-CCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEEC
T ss_pred eCCCc-cCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEEeeec
Confidence 98863 233468999999988777886421 145678999999999999999999986
No 320
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.65 E-value=3.1e-16 Score=120.06 Aligned_cols=103 Identities=28% Similarity=0.451 Sum_probs=87.6
Q ss_pred cCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeee---CCCCceEEec----eeeeeEEEEcCcccCceEE
Q psy12425 479 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKRE---HPMSSWIRVG----NTRFTTMAITGLSPGHQYE 551 (591)
Q Consensus 479 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~---~~~~~~~~~~----~~~~~~~~i~~l~~~~~Y~ 551 (591)
.++|.+|.++.+..++.+++.|+|.++. +++.+|.+|.|+++. .....|..+. ......+++.+|.|++.|.
T Consensus 15 ~~~P~~P~~l~~~~~~~~sv~l~W~p~~-~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~ 93 (124)
T 1wis_A 15 PELPGPPTNLGISNIGPRSVTLQFRPGY-DGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYS 93 (124)
T ss_dssp CCCCCCCEEEEEESCCSSCEEEEEECCC-CCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEEC
T ss_pred CCCCccCCCCEEEEecCCEEEEEEECCC-CCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEE
Confidence 4678999999999999999999998664 677889999999987 3567887653 3456799999999999999
Q ss_pred EEEEEEcCCcCCCCCCCcceEEeccccccCC
Q psy12425 552 FRVYAENVYGRSDPSTTSDLITTYGELLSGM 582 (591)
Q Consensus 552 ~~v~A~n~~G~~~~s~~~~~~~t~~~~p~~~ 582 (591)
|||+|.|.+|.|++|..+..++|.+++|..+
T Consensus 94 frV~A~N~~G~s~~S~~~~~~~T~~~~P~~~ 124 (124)
T 1wis_A 94 FRMRQVNIVGTSPPSQPSRKIQTLQSGPSSG 124 (124)
T ss_dssp CCCEEECSSCBCCCCCCCCCEECCCSSCCCC
T ss_pred EEEEEEECCccCCCcCCccceEcCCCCCCCC
Confidence 9999999999999999887788888777643
No 321
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.65 E-value=8.6e-16 Score=131.93 Aligned_cols=168 Identities=13% Similarity=0.171 Sum_probs=117.6
Q ss_pred CceeeeecCCeEEEEEEeccCC----CceEEEEE----------------CCEEeec-----CCceeEEE---eCCeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQ----PMEVSLTK----------------NGRVVQS-----DDRFKFTV---LDDYIII 53 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p----~~~v~W~~----------------~~~~~~~-----~~~~~~~~---~~~~~~l 53 (591)
|..+.+.+|+++.|.|.+.+.+ .+.+.|+| ++..+.. ..|..+.. .....+|
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 4578999999999999998876 46999998 5554432 23333321 1245689
Q ss_pred EEcccCCCCceEEEEEEEcCCeeeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCC
Q psy12425 54 FIKEIRKEDAGDYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISM 133 (591)
Q Consensus 54 ~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~ 133 (591)
.|.+++.+|+|.|+|.+.|..|.....+.|.|...|..+..+.......+..+.|.|.... +.+...+.+.+.....
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~---g~p~~~v~W~~~~~~~ 163 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKE---GSLPLQFEWQKLSDSQ 163 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSB---CCSSCEEEEEECSTTC
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCC---CCCCCEEEEEECCCCC
Confidence 9999999999999999999999888889999998887665443334556788999998532 3333334443321111
Q ss_pred CceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCC
Q psy12425 134 PHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMG 172 (591)
Q Consensus 134 ~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~ 172 (591)
..............+.|.++...+.+.|+|.|.|..|..
T Consensus 164 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~ 202 (214)
T 3jz7_A 164 TMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSD 202 (214)
T ss_dssp CCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred ccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcE
Confidence 100000012235589999999999999999999988764
No 322
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.65 E-value=1.5e-15 Score=113.45 Aligned_cols=88 Identities=19% Similarity=0.352 Sum_probs=79.8
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|++..+....++.+...+...+|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 20 ~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 99 (107)
T 3irg_B 20 PRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAA 99 (107)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEE
Confidence 56789999999999999999999999999999999888888877777778999999999999999999999999999999
Q ss_pred EEEEecCC
Q psy12425 82 TINITGLP 89 (591)
Q Consensus 82 ~l~v~~~p 89 (591)
.|.|..+|
T Consensus 100 ~l~V~~~P 107 (107)
T 3irg_B 100 AVTVLEPP 107 (107)
T ss_dssp EEEEEC--
T ss_pred EEEEEcCC
Confidence 99998764
No 323
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.64 E-value=7.2e-16 Score=130.80 Aligned_cols=164 Identities=12% Similarity=0.051 Sum_probs=108.6
Q ss_pred CceeeeecCCeEEEEEEeccCCC-----ceEEEEE-CCEEeecCCceeEEEe---CCeEEEEEcccCCCCceEEEEEEEc
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQP-----MEVSLTK-NGRVVQSDDRFKFTVL---DDYIIIFIKEIRKEDAGDYTVNLSN 72 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~-----~~v~W~~-~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~g~Y~c~~~n 72 (591)
+.++.+.+|+++.|.|.+.+.|. +.+.|+| ++.......+..+... .+..+|.|.+++.+|+|.|+|.+.|
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 88 (202)
T 3bp6_B 9 KEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVIC 88 (202)
T ss_dssp CSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEe
Confidence 35789999999999999998876 8999999 5554444455544322 1457999999999999999999999
Q ss_pred CCeeeEEEEEEEEecCCCCCCCCcce-EEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEee--cCcceEE
Q psy12425 73 SSGSVSGTFTINITGLPGPPIGPLDV-SEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT--CHDTTFI 149 (591)
Q Consensus 73 ~~g~~~~~~~l~v~~~p~~p~~~~~~-~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~--~~~~~~~ 149 (591)
..|.....+.|.|...+..|.. .+ ....+..+.|.|.... .+...+. |...+.......... .....+.
T Consensus 89 ~~~~~~~~~~l~V~~~~~~p~~--~~~~~~~g~~v~l~C~~~g----~P~p~v~--W~~~~~~~~~~~~~~~~~~~~~~~ 160 (202)
T 3bp6_B 89 GAAWDYKYLTVKVKASYMRIDT--RILEVPGTGEVQLTCQARG----YPLAEVS--WQNVSVPANTSHIRTPEGLYQVTS 160 (202)
T ss_dssp TTEEEEEEEEEEEEBCCCCEEE--EEEECTTTCCEEEEEEEEE----BSCCEEE--ETTCCSCCEEEEEECTTSCEEEEE
T ss_pred CCCcceEEEEEEecCCCCcccE--EEEecCCCCeEEEEEEccc----cCCceEE--EEeCCCCccCceeeCCCCCEEEEE
Confidence 9998888899999987655543 22 3345777888886411 1211222 211111111111111 1113344
Q ss_pred EcCCcCCcEEEEEEEEEccCCCCC
Q psy12425 150 VQGLTEGQEYLFHVMAVNENGMGP 173 (591)
Q Consensus 150 i~~l~~~~~y~~~~~a~n~~g~~~ 173 (591)
+..+...+.+.|+|.|.|..|...
T Consensus 161 i~~v~~~d~G~Y~C~a~N~~g~~~ 184 (202)
T 3bp6_B 161 VLRLKPQPSRNFSCMFWNAHMKEL 184 (202)
T ss_dssp EEEECCCTTCCEEEEEEETTTTEE
T ss_pred EEEEEcCCCCEEEEEEEcCCcccc
Confidence 567778889999999999988643
No 324
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.64 E-value=1.5e-15 Score=133.26 Aligned_cols=174 Identities=13% Similarity=0.207 Sum_probs=115.4
Q ss_pred EEeeccccceeccccEEEEEEEcCCCCCeeEEecC--------------CccCC-C---CCceEEEEe-CCeEEEEEcce
Q psy12425 295 IIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKG--------------SREIT-P---SARHHIFAE-GDTYTLIINSV 355 (591)
Q Consensus 295 ~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~--------------~~~~~-~---~~~~~~~~~-~~~~~l~i~~~ 355 (591)
+...+..+.+.+|+.+.|.| ..+.+.+.+.|++. +.... . ..++.+..+ ....+|.|.++
T Consensus 5 v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 83 (245)
T 4ei6_B 5 VLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPT 83 (245)
T ss_dssp CEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSC
T ss_pred eEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCC
Confidence 44455667789999999999 77788899999882 11110 1 145555442 34668999999
Q ss_pred ecccceEEEEEEEeCC----cceeeeeEEEEec------CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEe
Q psy12425 356 YGVDADEYVCRAVNKG----GVKSTKAELIIMT------APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWY 423 (591)
Q Consensus 356 ~~~d~g~y~c~a~n~~----g~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~ 423 (591)
+.+|+|.|.|.+.+.. +.......+.|.. +|.+.... .....+..|+.+.|.|.+.|. |.+ .+.|+
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~--~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 84 ALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFE--PSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (245)
T ss_dssp CGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEEC--CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeC--CCcccccCCCceEEEEEEeeEeCCCeEEEEE
Confidence 9999999999999642 2234455677764 23222111 011224558999999999984 444 89999
Q ss_pred eCCeEeeeccceEEEe-------cCC----eeEEEEeccCCCc-ceeEEEEEEcCCCccc
Q psy12425 424 RDNEVIESGGHFHVET-------SER----HAILTIRDASNVD-TAPYRVVAENDLGMDS 471 (591)
Q Consensus 424 ~~~~~~~~~~~~~~~~-------~~~----~~~l~i~~~~~~~-~g~y~c~a~n~~g~~~ 471 (591)
++|..+.......... .+. ...|.|.....+| .|.|+|.|.|......
T Consensus 162 ~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~~ 221 (245)
T 4ei6_B 162 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCCCc
Confidence 9999886433221100 111 2457888887777 8999999999765544
No 325
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.64 E-value=6.4e-15 Score=129.42 Aligned_cols=166 Identities=14% Similarity=0.201 Sum_probs=111.6
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccCC-----------------CCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REIT-----------------PSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
..+.+.+|+.+.|.|.+.+.+ .+.+.|+++. ..+. ...++.+..+ ....+|.|.+++
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 93 (261)
T 2xqy_G 14 GAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLT 93 (261)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCC
Confidence 455688999999999999876 6889999853 2110 0235555543 346789999999
Q ss_pred cccceEEEEEEEeCCcc---eeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEeeCCe
Q psy12425 357 GVDADEYVCRAVNKGGV---KSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRDNE 427 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~~~ 427 (591)
.+|+|.|.|.+.|..+. ......|.|.. +|.+...+. ...+..|+.+.|.|.+.+. |.+ .|.|++++.
T Consensus 94 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p---~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~ 170 (261)
T 2xqy_G 94 SEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAP---VCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL 170 (261)
T ss_dssp GGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECC---CCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred cccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCC---CccccCCCcEEEEEEEEeEeCCCCEEEEecCCC
Confidence 99999999999986431 12345677764 233321111 1124679999999999875 766 999999987
Q ss_pred EeeeccceEEEecC---CeeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 428 VIESGGHFHVETSE---RHAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 428 ~~~~~~~~~~~~~~---~~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
.+.......+...+ ....|.|.....+| |.|+|.|.|....
T Consensus 171 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 171 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 214 (261)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred cCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCC
Confidence 64211111111111 24678999888888 9999999997554
No 326
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.64 E-value=3.5e-15 Score=130.32 Aligned_cols=173 Identities=12% Similarity=0.189 Sum_probs=114.6
Q ss_pred EeeccccceeccccEEEEEEEcCCCCCeeEEecCCcc--------------C---CCCCceEEEEe-CCeEEEEEcceec
Q psy12425 296 IVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSRE--------------I---TPSARHHIFAE-GDTYTLIINSVYG 357 (591)
Q Consensus 296 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~--------------~---~~~~~~~~~~~-~~~~~l~i~~~~~ 357 (591)
...+..+.+.+|+.+.|.|.+.+ +.+.+.|++.... . ....++.+..+ ....+|.|.+++.
T Consensus 6 ~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~ 84 (240)
T 3q5y_A 6 VQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALEL 84 (240)
T ss_dssp EEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCG
T ss_pred ccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCCh
Confidence 34445677899999999999876 7789999982210 0 11235555442 3467899999999
Q ss_pred ccceEEEEEEEeCCc---ceeeeeEEEEec------CCcccCCCCcccceeecCCCeEEEEEeeec-cCCC-eEEEeeCC
Q psy12425 358 VDADEYVCRAVNKGG---VKSTKAELIIMT------APKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKP-KITWYRDN 426 (591)
Q Consensus 358 ~d~g~y~c~a~n~~g---~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~~ 426 (591)
+|+|.|.|.+.+..+ .......+.|.. +|.+...+ .....+..|+.+.|.|.+.+ .|.+ .+.|+++|
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~--~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g 162 (240)
T 3q5y_A 85 EDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFE--PSKAEIANKQKATLVCLARGFFPDHVELSWWVNG 162 (240)
T ss_dssp GGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEEC--CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred hHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeC--CchhhcccCCceEEEEEEeeEECCCeEEEEEECC
Confidence 999999999984322 223445666663 22222111 01123456899999999998 5656 79999999
Q ss_pred eEeeeccceE---EEecCC----eeEEEEeccCCCc-ceeEEEEEEcCCCccc
Q psy12425 427 EVIESGGHFH---VETSER----HAILTIRDASNVD-TAPYRVVAENDLGMDS 471 (591)
Q Consensus 427 ~~~~~~~~~~---~~~~~~----~~~l~i~~~~~~~-~g~y~c~a~n~~g~~~ 471 (591)
..+....... ....+. .+.|.|.....+| .|.|+|.|.|......
T Consensus 163 ~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~~ 215 (240)
T 3q5y_A 163 KEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSEE 215 (240)
T ss_dssp EEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred EECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCc
Confidence 9886433211 111122 2458888888888 7799999999866544
No 327
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.64 E-value=1.3e-14 Score=124.82 Aligned_cols=166 Identities=14% Similarity=0.231 Sum_probs=111.7
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCCcc--C------C-------------CCCceEEEEe--CCeEEEEEcc
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGSRE--I------T-------------PSARHHIFAE--GDTYTLIINS 354 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~~~--~------~-------------~~~~~~~~~~--~~~~~l~i~~ 354 (591)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++.... . . ...++.+..+ ....+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (221)
T 3m8o_H 8 GGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNS 87 (221)
T ss_dssp SCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECC
Confidence 345688999999999998743 678999873211 0 0 1245555543 3566899999
Q ss_pred eecccceEEEEEEEeCC--cceeeeeEEEEec----CCccc-CCCCcccceeecCCCeEEEEEeeec-cCC--CeEEEee
Q psy12425 355 VYGVDADEYVCRAVNKG--GVKSTKAELIIMT----APKFN-VPPRFRDTAYFDKGENVVVKIPFTG-YPK--PKITWYR 424 (591)
Q Consensus 355 ~~~~d~g~y~c~a~n~~--g~~~~~~~l~v~~----~p~~~-~~~~~~~~~~~~~g~~~~l~c~~~~-~p~--~~v~W~~ 424 (591)
++.+|+|.|.|.+.+.. ........|.|.. +|.+. ..+ ... ..|+.+.|.|.+.+ .|. +.+.|++
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~----~~~-~~g~~v~L~C~~~~~~P~~~~~v~W~~ 162 (221)
T 3m8o_H 88 LKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSL----CST-QPDGNVVIACLVQGFFPQEPLSVTWSE 162 (221)
T ss_dssp CCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEEC----CSC-CCTTEEEEEEEEEEEBSSCSEEEEESC
T ss_pred CCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecC----ccc-ccCCCEEEEEEEEeeECCCCEEEEEEE
Confidence 99999999999999874 2223445666653 22221 111 111 57999999999998 675 4899999
Q ss_pred CCeEeeeccceEEE-ecC----CeeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 425 DNEVIESGGHFHVE-TSE----RHAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 425 ~~~~~~~~~~~~~~-~~~----~~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
+|..+......... ..+ ..+.|.|.....+|.|.|+|.|.|..+..
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 163 SGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp CSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred CCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 98766321111111 111 12468999999999999999999987654
No 328
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.64 E-value=2.9e-15 Score=113.06 Aligned_cols=91 Identities=26% Similarity=0.421 Sum_probs=80.0
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeec-CCceeEEEeCC-eEEEEEcccCCCCceEEEEEEEcCCeeeEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQS-DDRFKFTVLDD-YIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~-~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~ 79 (591)
|.++.+.+|+++.|.|.+.|.|.+.+.|+|++..+.. ..++.+...+. ..+|.|.+++.+|+|.|+|.|.|..|....
T Consensus 22 p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 101 (116)
T 2kkq_A 22 PQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTC 101 (116)
T ss_dssp CCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEE
T ss_pred CCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEE
Confidence 6788999999999999999999999999999999875 46666655443 458999999999999999999999999999
Q ss_pred EEEEEEecCCCCC
Q psy12425 80 TFTINITGLPGPP 92 (591)
Q Consensus 80 ~~~l~v~~~p~~p 92 (591)
.+.|.|...|.++
T Consensus 102 ~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 102 NTRLDVTARPNQT 114 (116)
T ss_dssp EEEEEEECCSCCC
T ss_pred EEEEEEeCCCCCC
Confidence 9999999887654
No 329
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.64 E-value=5.8e-16 Score=136.22 Aligned_cols=259 Identities=12% Similarity=0.085 Sum_probs=94.0
Q ss_pred eEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCC
Q psy12425 197 VVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPS 276 (591)
Q Consensus 197 ~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s 276 (591)
.+....|++++|+|.... +.. ...++........ ..........+.+.++..+ +.|+|++... |. ..
T Consensus 8 ~~~V~~G~sv~l~Cs~~c-~~p-~~~~~~t~l~~~~------~~~~g~~~~~~~l~~v~~~--~~y~C~~~~~-~~--~~ 74 (291)
T 1mq8_A 8 KVILPRGGSVLVTCSTSC-DQP-KLLGIETPLPKKE------LLLPGNNRKVYELSNVQED--SQPMCYSNCP-DG--QS 74 (291)
T ss_dssp EEEECTTCEEEEEEEECC-SSC-SEEEEECSSCCCC------CCCSCSSEEEEEEESCCSC--CCCEEEEECS-SC--EE
T ss_pred ccEEcCCCeEEEEEeCCC-CCC-ccceEEecCCCcc------cccCCCceEEEEEEecccC--CeEEEEEEcC-Cc--cE
Confidence 345678999999999853 222 2222221111000 0000011234677777754 4699998543 32 22
Q ss_pred CCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCC-C--eeEEecCCccCCCCCceEEEEeCCeEEEEEc
Q psy12425 277 SASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPK-P--TISWLKGSREITPSARHHIFAEGDTYTLIIN 353 (591)
Q Consensus 277 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~-~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~ 353 (591)
.....+.+..+ +..+.+. +....+.+|+.++|+|.+.+..+ . .|.|++++..+..... .......+|.+.
T Consensus 75 ~~~v~l~V~~~--P~~v~I~--~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~---~~~~~~~~l~~~ 147 (291)
T 1mq8_A 75 TAKTFLTVYWT--PERVELA--PLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA---VGEPAEVTTTVL 147 (291)
T ss_dssp EEECEEEECBC--CSCCCBC--CCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC---CBTTEEEEEECC
T ss_pred EEEEEEEEecC--CCCCEEe--cCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC---CCCCceEEEEee
Confidence 23344555422 2233332 23345788999999999988544 3 5899999876642210 011123356666
Q ss_pred ceecccceEEEEEEEeCCcc--------eeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCC---eEEE
Q psy12425 354 SVYGVDADEYVCRAVNKGGV--------KSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKP---KITW 422 (591)
Q Consensus 354 ~~~~~d~g~y~c~a~n~~g~--------~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~---~v~W 422 (591)
....++.+.|+|+|.|..+. .+....|.|.++|........ ...+.+|+.+.|.|.+.|.+++ .+.|
T Consensus 148 ~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~--p~~l~eG~~v~l~C~~~g~~P~~~~~v~w 225 (291)
T 1mq8_A 148 VRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS--PRVLEVDTQGTVVCSLDGLFPVSEAQVHL 225 (291)
T ss_dssp CSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------------------------------------
T ss_pred eeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecC--CcCccCCCeEEEEEEcCCCCCCcccEEEE
Confidence 66667777999999997663 245567888887643221111 1246789999999999998654 6999
Q ss_pred eeCCeEeeeccceEEEecCCeeEEEEecc---CC--CcceeEEEEEEcCCCccceEEEEEecCCCC
Q psy12425 423 YRDNEVIESGGHFHVETSERHAILTIRDA---SN--VDTAPYRVVAENDLGMDSAIVKIQISDRPD 483 (591)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~--~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~ 483 (591)
+++|+.+.... ...++ .+++..+ .. ++.|.|+|.|.|..........+.|.+.|.
T Consensus 226 ~~~g~~l~~~~----~~~g~--~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~ 285 (291)
T 1mq8_A 226 ALGDQRLNPTV----TYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPA 285 (291)
T ss_dssp ------------------------------------------------------------------
T ss_pred EECCEecCcee----eecCC--eEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCC
Confidence 99998876421 11122 2222222 23 457888899987655556666777766543
No 330
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.64 E-value=3.4e-15 Score=109.73 Aligned_cols=86 Identities=21% Similarity=0.334 Sum_probs=79.4
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|+|..+....++.+...+...+|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 13 ~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 92 (99)
T 3puc_A 13 LQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSC 92 (99)
T ss_dssp CCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEE
Confidence 56789999999999999999999999999999999888888888877888999999999999999999999999998888
Q ss_pred EEEEec
Q psy12425 82 TINITG 87 (591)
Q Consensus 82 ~l~v~~ 87 (591)
.|.|..
T Consensus 93 ~l~V~~ 98 (99)
T 3puc_A 93 KLTIKA 98 (99)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 888863
No 331
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.64 E-value=5.4e-15 Score=126.29 Aligned_cols=181 Identities=13% Similarity=0.051 Sum_probs=113.1
Q ss_pred eEEeecC--CeEEEEEecCCCCCCcceEEEEE--EeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCC
Q psy12425 197 VVTQVGG--DFVNLSWDKPLDDGGSRIQGYWI--DKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGL 272 (591)
Q Consensus 197 ~~~~~~~--~~v~l~w~~~~~~~~~~~~~y~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~ 272 (591)
.+....| ..++|.|.... + ...+.+|.- ........... .......|.|.++...|.|.|+|.|.|..+.
T Consensus 16 ~v~v~eG~~~~v~L~C~~~~-p-~~~v~w~~~~~~g~~~~~~~~~----~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~ 89 (213)
T 2x1w_L 16 VVYITENKNKTVVIPCLGSI-S-NLNVSLCARYPEKRFVPDGNRI----SWDSKKGFTIPSYMISYAGMVFCEAKINDES 89 (213)
T ss_dssp EEEECCSTTCEEEECCCBSS-T-TCCEEEEEETTTEEECCCSSSC----EEETTTEEEEEGGGTTTCSEEEEEEC----C
T ss_pred EEEEecCCCccEEEeeccCC-C-CcEEEEEhhcCCCccccCCCcc----cccCCccEEEccCChhcCceEEEEEEECCee
Confidence 4455668 89999998753 2 233444332 11111111101 1123467999999999999999999985332
Q ss_pred CCCCCCcceEEEcCCCccCCCeEEeeccc-cceeccccEEEEEEEcCCCC--CeeEEecCCccCCCCCc-eEEEE-----
Q psy12425 273 SLPSSASNSVQIKDPMAAKAPEIIVPLRN-ANAIQNHNAQFQCTITGCPK--PTISWLKGSREITPSAR-HHIFA----- 343 (591)
Q Consensus 273 ~~~s~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~l~c~~~~~p~--~~v~W~~~~~~~~~~~~-~~~~~----- 343 (591)
. .+....+.+.. ..+|.+...+.. +.+.+|+.+.|.|.+.|.|. +.+.|++++..+..... .....
T Consensus 90 -~-~s~~~~l~v~~---~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~ 164 (213)
T 2x1w_L 90 -Y-QSIMYIVVVVG---YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGS 164 (213)
T ss_dssp -E-ECCCEEEEECB---CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSC
T ss_pred -E-EEEEEEEEEeC---CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCc
Confidence 1 12224444431 234445444433 47899999999999998553 57999998876543211 00000
Q ss_pred --eCCeEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEecCCcc
Q psy12425 344 --EGDTYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMTAPKF 388 (591)
Q Consensus 344 --~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~~p~~ 388 (591)
.....+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+
T Consensus 165 ~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 165 EMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211 (213)
T ss_dssp SCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----
T ss_pred cceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccccc
Confidence 111347999999999999999999999999999999999887764
No 332
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=3.9e-15 Score=109.39 Aligned_cols=86 Identities=19% Similarity=0.288 Sum_probs=76.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEE-EeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT-VLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|+|..+....++.+. ..++..+|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 91 (99)
T 1g1c_A 12 IQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSH 91 (99)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEE
Confidence 56788999999999999999999999999999999887766544 35666799999999999999999999999999998
Q ss_pred EEEEEec
Q psy12425 81 FTINITG 87 (591)
Q Consensus 81 ~~l~v~~ 87 (591)
+.|.|..
T Consensus 92 ~~l~V~~ 98 (99)
T 1g1c_A 92 AFLLVQA 98 (99)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 8888864
No 333
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.64 E-value=2.5e-15 Score=110.65 Aligned_cols=87 Identities=29% Similarity=0.395 Sum_probs=76.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEE-eCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|+|..+....+..+.. .+...+|.|.+++.+|+|.|+|.|.|..|..+..
T Consensus 12 p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (100)
T 2kdg_A 12 PENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFT 91 (100)
T ss_dssp CCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEE
Confidence 678899999999999999999999999999999998776554443 4445799999999999999999999999999999
Q ss_pred EEEEEecC
Q psy12425 81 FTINITGL 88 (591)
Q Consensus 81 ~~l~v~~~ 88 (591)
+.|.|...
T Consensus 92 ~~l~V~~~ 99 (100)
T 2kdg_A 92 VQLDVLAK 99 (100)
T ss_dssp EEEEEECC
T ss_pred EEEEEEec
Confidence 99998764
No 334
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.64 E-value=1.6e-14 Score=123.67 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=59.2
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECC--E---Eee---------cCCceeEEEeCCeEEEEEcccCCCCceEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG--R---VVQ---------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 67 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 67 (591)
|..+.+.+|++++|.|.+.+.|.+.+.|+|++ . .+. ...++.+...+...+|.|.+++.+|+|.|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYY 87 (213)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred CCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEE
Confidence 67899999999999999999999999999942 1 111 135677666667789999999999999999
Q ss_pred EEEEcC
Q psy12425 68 VNLSNS 73 (591)
Q Consensus 68 c~~~n~ 73 (591)
|.|.|.
T Consensus 88 C~~~~~ 93 (213)
T 3nl4_L 88 CQSTYE 93 (213)
T ss_dssp EEECCS
T ss_pred EecCCC
Confidence 999764
No 335
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.64 E-value=2.5e-14 Score=119.21 Aligned_cols=172 Identities=22% Similarity=0.314 Sum_probs=126.9
Q ss_pred EecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEEEEE
Q psy12425 85 ITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVM 164 (591)
Q Consensus 85 v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~ 164 (591)
+...|.+|.. +.+......++.|+|.+|. + .+.+|.+.+.... ..+...........+.+.+|.+++.|.|+|.
T Consensus 3 ~~t~p~~P~~-l~~~~~~~~sv~l~W~~p~---~-~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 76 (186)
T 1qr4_A 3 AGTDLDNPKD-LEVSDPTETTLSLRWRRPV---A-KFDRYRLTYVSPS-GKKNEMEIPVDSTSFILRGLDAGTEYTISLV 76 (186)
T ss_dssp -----CCCEE-EEEESCCSSEEEEEEECCS---S-CCSEEEEEEECTT-CCEEEEEECTTCSEEEEESCCSSCEEEEEEE
T ss_pred ccCCCcCCCc-eEEEecCCCEEEEEEeCCC---C-CccEEEEEEEeCC-CCeeEEECCCCCCEEEECCCCCCCEEEEEEE
Confidence 3455677766 5677778899999999875 2 6789999998543 3444444455678899999999999999999
Q ss_pred EEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeec
Q psy12425 165 AVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAIC 244 (591)
Q Consensus 165 a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 244 (591)
|.|..|.+.... +.... .|.+|..+.+.....+++.|+|.++. ..+.+|.|.++..+...+..... ..
T Consensus 77 a~~~~~~s~~~~----~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~-~~ 144 (186)
T 1qr4_A 77 AEKGRHKSKPTT----IKGST---VVGSPKGISFSDITENSATVSWTPPR----SRVDSYRVSYVPITGGTPNVVTV-DG 144 (186)
T ss_dssp EESSSCBCCCEE----EEEEC---CCCCCSCEEEESCCSSCEEEEECCCS----SCCSEEEEEEEETTCCCCEEEEE-ET
T ss_pred EEcCCccCCCEE----EEEEC---CCCCCCccEEEEeCCCEEEEEEECCC----CcccEEEEEEEeCCCCCceEEEc-CC
Confidence 999766554321 11122 46677788888888999999999863 35889999998876544444433 24
Q ss_pred CCceeeecCcccCCcEEEEEEEEcCCCCCC
Q psy12425 245 APSQINIPNLIEGRQYEFRVYAQNEAGLSL 274 (591)
Q Consensus 245 ~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~ 274 (591)
....+.|.+|.++..|.|++.|.|..|.+.
T Consensus 145 ~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~ 174 (186)
T 1qr4_A 145 SKTRTKLVKLVPGVDYNVNIISVKGFEESE 174 (186)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEETTEECC
T ss_pred CcCEEEEcCCCCCCEEEEEEEEEcCCCcCc
Confidence 668899999999999999999999877654
No 336
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.64 E-value=3.4e-15 Score=106.91 Aligned_cols=81 Identities=7% Similarity=0.126 Sum_probs=70.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+.+ +.+.+.|+|||..|..+.++++...+...+|.|.+++.+|+|.|+|.|.|. ..+.
T Consensus 12 ~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~----~~sa 86 (93)
T 1waa_A 12 LYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT----KSAA 86 (93)
T ss_dssp CCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE----EEEE
T ss_pred CcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC----cEEE
Confidence 56889999999999999986 457899999999999888999888888889999999999999999999874 3456
Q ss_pred EEEEec
Q psy12425 82 TINITG 87 (591)
Q Consensus 82 ~l~v~~ 87 (591)
.|.|..
T Consensus 87 ~L~V~~ 92 (93)
T 1waa_A 87 NLKVKE 92 (93)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 666653
No 337
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=2.5e-16 Score=119.88 Aligned_cols=105 Identities=37% Similarity=0.637 Sum_probs=92.7
Q ss_pred CCccceEEEEEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEe-ceeeeeEEEEcCcc
Q psy12425 467 LGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-GNTRFTTMAITGLS 545 (591)
Q Consensus 467 ~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~i~~l~ 545 (591)
.|..+..+.+.+.++|.+|.++.+..++.+++.|+|++|..+++.++.+|.|+++......|..+ .......+++.+|.
T Consensus 3 ~G~~~~~~~v~~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~v~~L~ 82 (120)
T 2yux_A 3 SGSSGASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITELV 82 (120)
T ss_dssp CCCCCCCCCCCCCCCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESSCCSSCCEECCCC
T ss_pred CCcccEEEEEEeecCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeecCCcCEEEECCCC
Confidence 46777888888899999999999999999999999999887777889999999998887889876 34567789999999
Q ss_pred cCceEEEEEEEEcCCcCCCCCCCcce
Q psy12425 546 PGHQYEFRVYAENVYGRSDPSTTSDL 571 (591)
Q Consensus 546 ~~~~Y~~~v~A~n~~G~~~~s~~~~~ 571 (591)
+++.|.|+|+|.|..|.|++|..+..
T Consensus 83 p~t~Y~frV~A~n~~G~s~~S~~s~~ 108 (120)
T 2yux_A 83 IGNEYYFRVFSENMCGLSEDATMTKE 108 (120)
T ss_dssp SSEEEEEEECCCSSSCSCSSCEECSS
T ss_pred CCCEEEEEEEEeeCCcCCCCccCcCC
Confidence 99999999999999999999886544
No 338
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.63 E-value=1.4e-15 Score=131.56 Aligned_cols=163 Identities=9% Similarity=0.101 Sum_probs=104.0
Q ss_pred eeccccEEEEEEEcCC---CCC-eeEEecCCccCCCCCce-EEEEeC----CeEEEEEcceecccceEEEEEEEeCCcce
Q psy12425 304 AIQNHNAQFQCTITGC---PKP-TISWLKGSREITPSARH-HIFAEG----DTYTLIINSVYGVDADEYVCRAVNKGGVK 374 (591)
Q Consensus 304 ~~~g~~~~l~c~~~~~---p~~-~v~W~~~~~~~~~~~~~-~~~~~~----~~~~l~i~~~~~~d~g~y~c~a~n~~g~~ 374 (591)
+.+|+.+.|.|.+.+. |.+ .|.|++++..+...... .....+ ...+|.|.++..+|.|.|+|.|.|..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 6799999999999876 765 89999987655432110 011111 12379999999999999999999988764
Q ss_pred eeeeEE----EEecCCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeCCeEeeeccceEEE-ecCC----e
Q psy12425 375 STKAEL----IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRDNEVIESGGHFHVE-TSER----H 443 (591)
Q Consensus 375 ~~~~~l----~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~~~~~~~~~~-~~~~----~ 443 (591)
.....+ .+..+|.+...+... ....|..+.|.|.+.|. |. ..|.|+++|..+......... ..+. .
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~---~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~ 185 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPK---EEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLY 185 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCG---GGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEE
T ss_pred CcEEEEecCCCCCcCCEEEEECCCh---HHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEE
Confidence 322222 233344443222111 11347889999999984 54 489999999987532221111 1111 1
Q ss_pred eEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 444 AILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 444 ~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
..|.|.....++.|.|+|.|.|....
T Consensus 186 s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 186 SKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEChhhcCCCCEEEEEEECCCCC
Confidence 23444444445689999999998654
No 339
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=114.02 Aligned_cols=92 Identities=20% Similarity=0.268 Sum_probs=80.6
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeec-CCceeEEEe-CCeEEEEEcccCCCCceEEEEEEEcCCeeeEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQS-DDRFKFTVL-DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~ 79 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|++..+.. ..++.+... +....|.|.+++.+|+|.|+|.|.|..|....
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~ 94 (110)
T 2dm2_A 15 LKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISC 94 (110)
T ss_dssp CCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEE
T ss_pred CcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEE
Confidence 5678999999999999999999999999999999876 456666654 34468999999999999999999999999988
Q ss_pred EEEEEEecCCCCCC
Q psy12425 80 TFTINITGLPGPPI 93 (591)
Q Consensus 80 ~~~l~v~~~p~~p~ 93 (591)
.+.|.|...|.+|.
T Consensus 95 ~~~l~V~~~~~~P~ 108 (110)
T 2dm2_A 95 TGRLMVQAVNSGPS 108 (110)
T ss_dssp CCCEEEECCSCCSS
T ss_pred EEEEEEECCCCCCC
Confidence 89999998887764
No 340
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.63 E-value=2.6e-15 Score=111.22 Aligned_cols=99 Identities=24% Similarity=0.230 Sum_probs=81.7
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcC
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENV 559 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~ 559 (591)
.+|.+|..+.+..++.+++.|+|++|.. +|..|.+|+|+++... ..|........+.+.|.+|.+++.|.|+|+|.|.
T Consensus 6 ~~P~~P~~~~~~~~s~~sv~l~W~~p~~-~g~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 83 (106)
T 1x4x_A 6 SGPDQCKPPQVTCRSATCAQVNWEVPLS-NGTDVTEYRLEWGGVE-GSMQICYCGPGLSYEIKGLSPATTYYCRVQALSV 83 (106)
T ss_dssp CSCCCCCCCCCEEEETTEEEEECCCCSC-SSSCCCEEEEEEESST-TSCCEEEEESCSEEEEESCCSSCEEEEEEEEECS
T ss_pred CCcCCCCCCEEEEcCCCEEEEEEcCCCC-CCCcceEEEEEEEcCC-CceEEEEeCCcceEEEcCCCCCCEEEEEEEEEcC
Confidence 5789999999999999999999998874 6678999999998665 3444444455678999999999999999999999
Q ss_pred CcCCCCCCCcceEEeccccccC
Q psy12425 560 YGRSDPSTTSDLITTYGELLSG 581 (591)
Q Consensus 560 ~G~~~~s~~~~~~~t~~~~p~~ 581 (591)
+|.|++|.... ++|.+.+|..
T Consensus 84 ~G~g~~S~~v~-~~T~~~~P~~ 104 (106)
T 1x4x_A 84 VGAGPFSEVVA-CVTPPSSGPS 104 (106)
T ss_dssp SCCCCBCCCEE-EECCCCCSCC
T ss_pred CcCCCCcCCEE-EECCCCCcCC
Confidence 99999998764 4666656554
No 341
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.63 E-value=7e-14 Score=132.62 Aligned_cols=320 Identities=16% Similarity=0.161 Sum_probs=168.3
Q ss_pred cCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCC-----cceEEEE
Q psy12425 151 QGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGG-----SRIQGYW 225 (591)
Q Consensus 151 ~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~-----~~~~~y~ 225 (591)
..+.....|.|++.|.|..|........ ....|.+|..+.+.... +.+.|+|.+|..... .....|.
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~ 148 (419)
T 2gys_A 77 QSFVVTDVDYFSFQPDRPLGTRLTVTLT-------QHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFE 148 (419)
T ss_dssp SCCCTTCEEEEEEEESSCCCEEEEEEGG-------GSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEE
T ss_pred cceeeecccEEEEeCCccccccceEcHH-------HcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEE
Confidence 4455567899999997665542221111 12367778788777665 699999999754321 2467899
Q ss_pred EEeeecCCCccEEEEeeecCCceeeec--CcccCCcEEEEEEEEcCC---CCCCCCCCcceEEEcCCCccCCCeEEeecc
Q psy12425 226 IDKHEVGSDAWQRVNVAICAPSQINIP--NLIEGRQYEFRVYAQNEA---GLSLPSSASNSVQIKDPMAAKAPEIIVPLR 300 (591)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~i~--~l~~~~~~~y~c~a~n~~---g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~ 300 (591)
|.++..+ ..|............+.+. +|.++..|.++++|.+.. +.+.++..+..+.+..+...
T Consensus 149 v~yr~~~-~~w~~~~~~~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~---------- 217 (419)
T 2gys_A 149 VVYKRLQ-DSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD---------- 217 (419)
T ss_dssp EEEEETT-SCSTTCEEEEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC----------
T ss_pred EEEccCC-CChhheeeecccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc----------
Confidence 9999876 6676554432234444555 899999999999999864 34566655555554422111
Q ss_pred ccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCC--cceeeee
Q psy12425 301 NANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKG--GVKSTKA 378 (591)
Q Consensus 301 ~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~--g~~~~~~ 378 (591)
....-.|.|...+.....+.|...+ .+.....+. ....... |....
T Consensus 218 -----~~~p~~l~c~~~~~~~l~c~W~~~~-~~~~~~~y~------------------------l~y~~~~~~g~~~~-- 265 (419)
T 2gys_A 218 -----EAQPQNLECFFDGAAVLSCSWEVRK-EVASSVSFG------------------------LFYKPSPDAGSAVL-- 265 (419)
T ss_dssp -----TTSCEEEEEEECSSSEEEEEEEEEH-HHHTTCCEE------------------------EEEECC-----CCC--
T ss_pred -----cCCCceEEEEECCceEEEeEEECCC-CCCCceeEE------------------------EEEEecCccccccC--
Confidence 1223456777665555567786531 111111111 1111000 00000
Q ss_pred EEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCccee
Q psy12425 379 ELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAP 458 (591)
Q Consensus 379 ~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 458 (591)
. -.-.|...- ..+ ....+. .....+.+.++.....|.
T Consensus 266 -----------------~---------~~~~C~~~~---------~~~----~~~~~~----~~~c~~~~~~l~~~~~y~ 302 (419)
T 2gys_A 266 -----------------L---------REEECSPVL---------REG----LGSLHT----RHHCQIPVPDPATHGQYI 302 (419)
T ss_dssp -----------------C---------CCEECCCEE---------EEC----CTTTEE----EEEEEEECSCTTTCCEEE
T ss_pred -----------------c---------ccccCCCcc---------ccc----CCCcce----eEEeEEECccCCccCEEE
Confidence 0 000110000 000 000000 012234444454444555
Q ss_pred EEEEEEcCCCccceEEEEEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEE---eceee
Q psy12425 459 YRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIR---VGNTR 535 (591)
Q Consensus 459 y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~---~~~~~ 535 (591)
+++.|.+..|.... ...-.|.|| .+.+.. ..+++.|+|++|....+..+..|+|.|+..+ ..|.. .....
T Consensus 303 i~V~a~~~~~~~~~----~~~v~p~PP-~l~v~~-~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~-~~w~~~~~~~~~~ 375 (419)
T 2gys_A 303 VSVQPRRAEKHIKS----SVNIQMAPP-SLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDT-ATWKDSKTETLQN 375 (419)
T ss_dssp EEEEECCCCEEEEG----GGSBCCCCC-EEEEC----CCCEEEEEC--------CEEEEEEEECSS-SCSTTSCEEEEES
T ss_pred EEEEEccCCccccc----eEEEEECCC-CeEEEE-eCCeEEEEECCCcccccccceEEEEEEEcCC-CCcceeecccccc
Confidence 55555443331100 001136666 355544 4789999999885322235789999998765 34531 11114
Q ss_pred eeEEEEcCcccCceEEEEEEEEcCCc--CCCCCCCcce
Q psy12425 536 FTTMAITGLSPGHQYEFRVYAENVYG--RSDPSTTSDL 571 (591)
Q Consensus 536 ~~~~~i~~l~~~~~Y~~~v~A~n~~G--~~~~s~~~~~ 571 (591)
.+.+.|.+|.|++.|.|+|+|.+..| .|.+|+.+..
T Consensus 376 ~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~ 413 (419)
T 2gys_A 376 AHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEA 413 (419)
T ss_dssp CSEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCC
T ss_pred ccEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCC
Confidence 57899999999999999999999874 4555555443
No 342
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.63 E-value=2.1e-14 Score=121.24 Aligned_cols=166 Identities=20% Similarity=0.308 Sum_probs=125.7
Q ss_pred cceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCce-EEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCC
Q psy12425 96 LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW-ICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPP 174 (591)
Q Consensus 96 ~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~ 174 (591)
+.+......++.|+|.+|. +..+..|.+.+...+...+ ...........+.+.+|.+++.|.|+|.|.|..|.+..
T Consensus 29 l~~~~~~~~sv~lsW~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~ 105 (203)
T 2gee_A 29 LSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTP 105 (203)
T ss_dssp EEEECCTTTCEEEEEECCS---SSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEESSSCBCCC
T ss_pred cEEEecCCCEEEEEecCCC---CCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCCcccc
Confidence 5666777899999999887 4478899999987765543 33333567789999999999999999999998877655
Q ss_pred CCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCC-ccEEEEeeecCCceeeecC
Q psy12425 175 LEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSD-AWQRVNVAICAPSQINIPN 253 (591)
Q Consensus 175 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~ 253 (591)
... .. ...+| +|..+.+.....+++.|+|.+|. +..+.+|.|.++..... .+.... .......+.|.+
T Consensus 106 ~~~---~t---~~~~p-~P~~l~~~~~~~~sv~l~W~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~i~~ 174 (203)
T 2gee_A 106 TTL---TQ---QTAVP-PPTDLRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELS-ISPSDNAVVLTN 174 (203)
T ss_dssp EEE---EE---ECCCC-CCEEEEEEEEETTEEEEEEECCS---SCCCSEEEEEEEETTCGGGCEEEE-ECTTCCEEEECS
T ss_pred Eee---ee---cCCCc-CCCceEEEEcCCCEEEEEEcCCC---CCCccEEEEEEEECCCCCccEEEE-cCCCcCEEEECC
Confidence 422 11 12233 66777778888999999999973 23788999999875443 344332 234668999999
Q ss_pred cccCCcEEEEEEEEcCCCCCCC
Q psy12425 254 LIEGRQYEFRVYAQNEAGLSLP 275 (591)
Q Consensus 254 l~~~~~~~y~c~a~n~~g~~~~ 275 (591)
|.++..|.|+++|.|..|.+.+
T Consensus 175 L~p~t~Y~~~V~A~~~~g~s~p 196 (203)
T 2gee_A 175 LLPGTEYVVSVSSVYEQHESTP 196 (203)
T ss_dssp CCTTCEEEEEEEEEETTEECCC
T ss_pred CCCCCEEEEEEEEecCCCcCCC
Confidence 9999999999999998887653
No 343
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.63 E-value=6.8e-15 Score=128.28 Aligned_cols=212 Identities=8% Similarity=0.026 Sum_probs=108.8
Q ss_pred EeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCc--cEEEEe--eecCCceeeecCcccCCcEEEEEEEEcCCCCCC
Q psy12425 199 TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA--WQRVNV--AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSL 274 (591)
Q Consensus 199 ~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~--~~~~~~--~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~ 274 (591)
....|+.++|.|.... .. . .|.+. ..+... +..... .......|.|.+++..|.|.|+|.+.+..+...
T Consensus 17 ~V~~G~~VtL~C~~~~--~~-~--~~~W~--k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~ 89 (257)
T 1b6u_A 17 LVKSEETVILQCWSDV--RF-Q--HFLLH--REGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQ 89 (257)
T ss_dssp EEESSCCEEEEEEESS--CC-S--EEEEE--EESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTS
T ss_pred EecCCCCEEEEEecCC--CC-c--EEEEE--ECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCcc
Confidence 4457889999999742 11 1 22221 112111 111100 011246799999999999999999987533211
Q ss_pred CC--CCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEe-CCeEEEE
Q psy12425 275 PS--SASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAE-GDTYTLI 351 (591)
Q Consensus 275 ~s--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~l~ 351 (591)
.+ +....+.+.. ...+|.+...+. ..+.+|+.++|.|.+.+.+ +.+.|+|++..+........... .....|.
T Consensus 90 ~s~~S~~~~L~V~~--~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~ 165 (257)
T 1b6u_A 90 LSAPSDPLDIVITG--LYEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFP 165 (257)
T ss_dssp CCCCCCCEEEEEEC--SSCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEE
T ss_pred ccccCCCEEEeccc--CCCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCceeEEEE
Confidence 12 2334444443 234677765544 4688999999999998764 68999999876643222111111 1245799
Q ss_pred EcceecccceEEEEEEEeCCc-----ceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCC
Q psy12425 352 INSVYGVDADEYVCRAVNKGG-----VKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDN 426 (591)
Q Consensus 352 i~~~~~~d~g~y~c~a~n~~g-----~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~ 426 (591)
|.+++ |+|.|+|.|.+... ..+....|.|..+|....++. .......|..+.|.|.+ |.+.+.+.|...+
T Consensus 166 I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~--~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 166 LGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSP--TEPSSETGNPRHLHAAA-EQKLISEEDLNLD 240 (257)
T ss_dssp EEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC----------------------------------------
T ss_pred ecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCC--cccCccCCCeEEEEEEE-cchHHHHHHhhhh
Confidence 99998 99999999997643 224557788888776552221 12234568889999765 6677788887644
No 344
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.63 E-value=6.2e-15 Score=127.35 Aligned_cols=174 Identities=10% Similarity=0.191 Sum_probs=113.4
Q ss_pred CCeEE-eeccccceeccccEEEEEEEcCC-CC-C-eeEEecCCccC-CCCCceEEEEeCC----eEEEEEcceecccceE
Q psy12425 292 APEII-VPLRNANAIQNHNAQFQCTITGC-PK-P-TISWLKGSREI-TPSARHHIFAEGD----TYTLIINSVYGVDADE 362 (591)
Q Consensus 292 ~p~~~-~~~~~~~~~~g~~~~l~c~~~~~-p~-~-~v~W~~~~~~~-~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~ 362 (591)
+|.+. ..+....+..|+.+.|.|.+.+. |. + .+.|+++|..+ ...........++ ...|.|.++..+|.|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 45443 45556667899999999999884 63 4 99999998877 3222211111112 2369999999999999
Q ss_pred EEEEEEeCCcceeeeeEEEEe------cCCcccCCCCcccceeecCCCeEEEEEeeecc-C-CCeEEEeeCCeEeeeccc
Q psy12425 363 YVCRAVNKGGVKSTKAELIIM------TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-P-KPKITWYRDNEVIESGGH 434 (591)
Q Consensus 363 y~c~a~n~~g~~~~~~~l~v~------~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p-~~~v~W~~~~~~~~~~~~ 434 (591)
|+|.|.|..+.. ...+.|. .+|.+...+.... .+ .+..+.|.|.+.|. | .+.|.|+++|..+.....
T Consensus 92 Y~C~~~~~~~~~--~~~~~v~~~~~~~~~P~v~v~~~~~~--~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~ 166 (231)
T 2w59_A 92 FTCTVQHEELPL--PLSKSVYRNTGPTTPPLIYPFAPHPE--EL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEF 166 (231)
T ss_dssp EEEEEECTTCSS--CEEEEECCCCSCCBCCEEEEECCCGG--GG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGC
T ss_pred EEEEEEcCCCCC--ceEEEEecCCCCCcCCEEEEeCCCHH--Hh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCccc
Confidence 999999987653 2333343 2343322111111 11 24579999999985 4 379999999998865431
Q ss_pred eE---EEe--------cC-C----eeEEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 435 FH---VET--------SE-R----HAILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 435 ~~---~~~--------~~-~----~~~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
.. ... .+ . .+.|.|.....+|.|.|+|.|.|.....
T Consensus 167 ~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~~ 218 (231)
T 2w59_A 167 VTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALPM 218 (231)
T ss_dssp EECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTSTT
T ss_pred ccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCCC
Confidence 11 111 11 1 2567788777788999999999986543
No 345
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.62 E-value=1.4e-14 Score=122.15 Aligned_cols=161 Identities=9% Similarity=-0.021 Sum_probs=105.7
Q ss_pred eeeeecCCeEEEEEEeccCCCceEEEEECC-EEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEE
Q psy12425 4 ALYIPEGDNTKVKIFYAGDQPMEVSLTKNG-RVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 82 (591)
Q Consensus 4 ~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~ 82 (591)
.+.+.+|+++.|.|.+.|.|.+.+.|+++. ..+ . ......+....|.|.+++.+|+|.|.|.|.|..|..+..+.
T Consensus 10 ~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~ 85 (202)
T 1vca_A 10 RYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--N--GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQ 85 (202)
T ss_dssp EEEEETTSCEEEEEEEESCSSCEEEEEETTCCCC--S--SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEE
T ss_pred cEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--c--ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEE
Confidence 345569999999999999999999999842 211 1 12233445568999999999999999999999998888899
Q ss_pred EEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEe---------ecCcceEEEcCC
Q psy12425 83 INITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIST---------TCHDTTFIVQGL 153 (591)
Q Consensus 83 l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~l 153 (591)
|.|...|..+..........+..++|.|.... +.+.....+.|...+. ....... ......+.+...
T Consensus 86 l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~---~~p~~~~~i~W~k~~~-~l~~~~~~~~~~~~~~~~~~~~l~i~~~ 161 (202)
T 1vca_A 86 VEIYSFPKDPEIHLSGPLEAGKPITVKCSVAD---VYPFDRLEIDLLKGDH-LMKSQEFLEDADRKSLETKSLEVTFTPV 161 (202)
T ss_dssp EEEEBCCSCCEEEESSCEETTSCEEEEEEEEE---EBSGGGEEEEEEETTE-EEEEEECCSCCSSCCCEEEEEEEEECCC
T ss_pred EEEEeCCCCCEeCCceEEcCCCCEEEEEEECC---cCCCCCeEEEEEeCCe-ECcccccccccCcCcceEEEEEEEEEee
Confidence 99998876554322234556778888887432 1111011122211111 0000000 011234567777
Q ss_pred cCCcEEEEEEEEEccCCCC
Q psy12425 154 TEGQEYLFHVMAVNENGMG 172 (591)
Q Consensus 154 ~~~~~y~~~~~a~n~~g~~ 172 (591)
..++...|+|.|.|..|..
T Consensus 162 ~~d~~g~ytC~A~n~~~~~ 180 (202)
T 1vca_A 162 IEDIGKVLVCRAKLHIDEM 180 (202)
T ss_dssp GGGTTCEEEEEEEECSCCC
T ss_pred eccCCCeEEEEEEccccCC
Confidence 7788889999999987754
No 346
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.62 E-value=1.7e-15 Score=134.77 Aligned_cols=178 Identities=13% Similarity=0.201 Sum_probs=116.1
Q ss_pred CeEEeeccccceeccccEEEEEEEcCCCCCeeEEecC--CccC------------CC----CCceEEEE-eCCeEEEEEc
Q psy12425 293 PEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKG--SREI------------TP----SARHHIFA-EGDTYTLIIN 353 (591)
Q Consensus 293 p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~--~~~~------------~~----~~~~~~~~-~~~~~~l~i~ 353 (591)
+.+...+..+.+.+|+.+.|.|.+. .+.+.+.|++. +... .. ..++.+.. .+...+|.|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 3444445567789999999999987 57789999982 2211 00 14555543 2336789999
Q ss_pred ceecccceEEEEEEEeC--CcceeeeeEEEEecCCcccCCCCc----ccceeecCCCeEEEEEeeeccCCC--eEEEeeC
Q psy12425 354 SVYGVDADEYVCRAVNK--GGVKSTKAELIIMTAPKFNVPPRF----RDTAYFDKGENVVVKIPFTGYPKP--KITWYRD 425 (591)
Q Consensus 354 ~~~~~d~g~y~c~a~n~--~g~~~~~~~l~v~~~p~~~~~~~~----~~~~~~~~g~~~~l~c~~~~~p~~--~v~W~~~ 425 (591)
+++.+|+|.|+|.+.|. .+.......+.|...+....+|.. .....+..|+.+.|.|.+.+.+++ .+.|+++
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~ 185 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 185 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEEC
Confidence 99999999999999984 333344556777652211111111 011234458999999999986654 8999999
Q ss_pred CeEeeeccceEEE--------ecC---CeeEEEEeccCCCc-ceeEEEEEEcCCCccc
Q psy12425 426 NEVIESGGHFHVE--------TSE---RHAILTIRDASNVD-TAPYRVVAENDLGMDS 471 (591)
Q Consensus 426 ~~~~~~~~~~~~~--------~~~---~~~~l~i~~~~~~~-~g~y~c~a~n~~g~~~ 471 (591)
|..+......... .++ -...|.|.....+| .|.|+|.|.|......
T Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~~ 243 (268)
T 3pl6_D 186 GKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 243 (268)
T ss_dssp SSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred CEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCCC
Confidence 9888543221100 011 12456777777776 9999999999866543
No 347
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.62 E-value=4.9e-14 Score=117.45 Aligned_cols=164 Identities=12% Similarity=0.172 Sum_probs=113.8
Q ss_pred EEeecCCeEEEEEecCCCCCCc-ceEEEEEEeeecCCCccEEEEe--eecCCceeeecCcccCCcEEEEEEEEcCCCCCC
Q psy12425 198 VTQVGGDFVNLSWDKPLDDGGS-RIQGYWIDKHEVGSDAWQRVNV--AICAPSQINIPNLIEGRQYEFRVYAQNEAGLSL 274 (591)
Q Consensus 198 ~~~~~~~~v~l~w~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~ 274 (591)
.....|..++|.|.....+... .+.+|. .+ ..+.. .......|.|. +..|.|.|+|.|.|..
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k-----~~----~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~~---- 72 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLK-----GG----VVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPEP---- 72 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEES-----SS----EEEECTTCCCSEEEEEEC--GGGCCEEEEEEEESTT----
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEe-----CC----EEeecccccCCcEEEEEe--chhhCeEEEEEEECCc----
Confidence 3446688899999864322211 222221 11 01110 01112355555 6889999999999821
Q ss_pred CCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCC-CCeeEEec---CCc-cCCC--CCceEEEEeCCe
Q psy12425 275 PSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCP-KPTISWLK---GSR-EITP--SARHHIFAEGDT 347 (591)
Q Consensus 275 ~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p-~~~v~W~~---~~~-~~~~--~~~~~~~~~~~~ 347 (591)
.....+.+. .+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|++ ++. .+.. ..++.+..++..
T Consensus 73 --~~~~~l~V~-----~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (184)
T 3b5h_A 73 --MGTANIQLH-----GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGR 145 (184)
T ss_dssp --SCEEEEEEC-----CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTE
T ss_pred --CcEEEEEEe-----cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCe
Confidence 134455554 467776666667788999999999999999 79999999 444 3332 256777777778
Q ss_pred EEEEEccee-cccceEEEEEEEeCCcceeeeeEEEEe
Q psy12425 348 YTLIINSVY-GVDADEYVCRAVNKGGVKSTKAELIIM 383 (591)
Q Consensus 348 ~~l~i~~~~-~~d~g~y~c~a~n~~g~~~~~~~l~v~ 383 (591)
..|.|.++. ..|.|.|+|.|.|..|.....+.|.|.
T Consensus 146 ~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 146 SELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 899999999 999999999999999998888887775
No 348
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.62 E-value=6.8e-15 Score=109.65 Aligned_cols=84 Identities=15% Similarity=0.129 Sum_probs=73.1
Q ss_pred cCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeC-------CeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 9 EGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD-------DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 9 ~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
.+..+.|.|.+.|.|.|.|+|+|||+.|..+.+..+.... ...+|.|.+++..|+|.|+|.|.|..|....++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 4678999999999999999999999999888776544322 246899999999999999999999999999999
Q ss_pred EEEEecCCCCC
Q psy12425 82 TINITGLPGPP 92 (591)
Q Consensus 82 ~l~v~~~p~~p 92 (591)
.|.|...|...
T Consensus 94 ~l~v~~~P~~~ 104 (126)
T 1he7_A 94 MAAFMDNPFEF 104 (126)
T ss_dssp EECCCSCTTSC
T ss_pred EEEEEcCCCCC
Confidence 99999888653
No 349
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.62 E-value=3.2e-15 Score=108.14 Aligned_cols=83 Identities=14% Similarity=0.310 Sum_probs=72.4
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECC--EEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG--RVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~ 79 (591)
|..+.+.+|+.+.|.|.+.|.|.|.+.|+|++ ..+... ..+........|.|.+++.+|+|.|+|.|.|..|..+.
T Consensus 9 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~ 86 (93)
T 1wit_A 9 SRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE--LLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEA 86 (93)
T ss_dssp CCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT--SEEEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEE
T ss_pred CCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc--EEEEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEE
Confidence 56788999999999999999999999999999 877554 34445566689999999999999999999999999888
Q ss_pred EEEEEEe
Q psy12425 80 TFTINIT 86 (591)
Q Consensus 80 ~~~l~v~ 86 (591)
.+.|.|.
T Consensus 87 ~~~l~V~ 93 (93)
T 1wit_A 87 IFEVIVQ 93 (93)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 8888773
No 350
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.62 E-value=2.2e-15 Score=132.98 Aligned_cols=126 Identities=15% Similarity=0.206 Sum_probs=86.2
Q ss_pred CCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcC-CCC-C
Q psy12425 245 APSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITG-CPK-P 322 (591)
Q Consensus 245 ~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~p~-~ 322 (591)
....|.|.+++..|.|.|+|.|.|..+.... ....+.+.. ...+|.+...........|+.+.|.|.+.| .|. +
T Consensus 111 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~--~~~~l~V~~--~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~ 186 (254)
T 2c1o_A 111 TDFTLKISRVEAEDLGIYYCVQGSHFPPTFG--AGTKLELKR--ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDI 186 (254)
T ss_dssp TEEEEEESSCCGGGCSEEEEEECSSSSCEEB--CCEEEEECC--CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCC
T ss_pred CEEEEEECcCCcccCEEEEEEEEcCcceEec--CCEEEEECC--CCCCCeeEeecCChhhccCCcEEEEEEEecccCCCc
Confidence 3458999999999999999999987542211 122344432 124677766544444456889999999988 444 4
Q ss_pred eeEEecCCccCCCCC--ceEEEEeCC-----eEEEEEcceecccceEEEEEEEeCCcce
Q psy12425 323 TISWLKGSREITPSA--RHHIFAEGD-----TYTLIINSVYGVDADEYVCRAVNKGGVK 374 (591)
Q Consensus 323 ~v~W~~~~~~~~~~~--~~~~~~~~~-----~~~l~i~~~~~~d~g~y~c~a~n~~g~~ 374 (591)
.+.|++++..+.... ......++. ...|.|.++..+|+|.|+|.|.|.....
T Consensus 187 ~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 187 NVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp EEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred EEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 699999998776541 111111111 3479999999999999999999976543
No 351
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.62 E-value=1.9e-14 Score=123.01 Aligned_cols=169 Identities=15% Similarity=0.211 Sum_probs=109.2
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCC--ccC----------------CCCCceEEEEe--CCeEEEEEcceec
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGS--REI----------------TPSARHHIFAE--GDTYTLIINSVYG 357 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~--~~~----------------~~~~~~~~~~~--~~~~~l~i~~~~~ 357 (591)
..+.+.+|+.+.|.|.+.+.+ .+.+.|+++. ... ....++.+..+ +...+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (215)
T 1c5d_H 8 GPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQT 87 (215)
T ss_dssp CCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCG
T ss_pred CCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCc
Confidence 456688999999999998864 5789998853 211 01235555543 3457999999999
Q ss_pred ccceEEEEEEEeCCcc---eeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEeeCCeE
Q psy12425 358 VDADEYVCRAVNKGGV---KSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRDNEV 428 (591)
Q Consensus 358 ~d~g~y~c~a~n~~g~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~~~~ 428 (591)
+|+|.|.|.+.|..+. ......|.|.. +|.+...+. ...+..|+.+.|.|.+.+. |.| .+.|++++..
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~---~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 164 (215)
T 1c5d_H 88 EDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAP---GCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALS 164 (215)
T ss_dssp GGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECC---CSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTC
T ss_pred ccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccC---ChhhccCCcEEEEEEEeeeEcCCcEEEEccCCcc
Confidence 9999999999987532 22346777763 233321111 1124679999999999987 877 9999999865
Q ss_pred eeeccceEEEecCCeeEE--EEeccCCCcceeEEEEEEcCCCccceE
Q psy12425 429 IESGGHFHVETSERHAIL--TIRDASNVDTAPYRVVAENDLGMDSAI 473 (591)
Q Consensus 429 ~~~~~~~~~~~~~~~~~l--~i~~~~~~~~g~y~c~a~n~~g~~~~~ 473 (591)
+.......... +....+ .|.....++ |.|+|.|.|..|.....
T Consensus 165 ~~~~~~~~~~~-~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~ 209 (215)
T 1c5d_H 165 SDVHTFPAVLQ-SGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVD 209 (215)
T ss_dssp CSCCBCCCEEE-TTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEE
T ss_pred CceEecCcccC-CCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEE
Confidence 43111111111 111111 233333356 99999999998875443
No 352
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.62 E-value=4.1e-15 Score=111.14 Aligned_cols=101 Identities=24% Similarity=0.345 Sum_probs=83.6
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCC-CceEEeceeeeeEEEEcCcccCceEEEEEEEEc
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM-SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAEN 558 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n 558 (591)
.+|.+|..+.+..++.+++.|+|.+|..+++..+.+|.|+++.... ..|..........+++.+|.+++.|.|+|+|.|
T Consensus 6 ~~P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n 85 (109)
T 1x5x_A 6 SGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYN 85 (109)
T ss_dssp CCCCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEESCSEEEEESCCSSCEEEEEEEEEC
T ss_pred CCCcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEeCCccEEEECCCCCCCEEEEEEEEEe
Confidence 5688888889999999999999999887777789999999987664 366665555578999999999999999999999
Q ss_pred CCcCCCCCCCcceEEeccccccC
Q psy12425 559 VYGRSDPSTTSDLITTYGELLSG 581 (591)
Q Consensus 559 ~~G~~~~s~~~~~~~t~~~~p~~ 581 (591)
..|.|.+|..+.+ +|.+.+|..
T Consensus 86 ~~G~s~~S~~~~~-~T~~~~P~~ 107 (109)
T 1x5x_A 86 SEGKSNPSEVVEF-TTCPDSGPS 107 (109)
T ss_dssp SSCEEEECCCEEE-ECCCCCCCC
T ss_pred CCCCcCCccCEEe-EeCCCCCCC
Confidence 9999999987654 555545543
No 353
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.61 E-value=3.6e-15 Score=125.61 Aligned_cols=159 Identities=13% Similarity=0.102 Sum_probs=106.9
Q ss_pred eeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCee--eEEEEEE
Q psy12425 6 YIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGS--VSGTFTI 83 (591)
Q Consensus 6 ~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~--~~~~~~l 83 (591)
.|.+|++++|.|.+.+ +.+.+.|+|+|..+....+ ..........|.|.+++.+|+|.|+|.|.|..|. .+..+.|
T Consensus 15 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l 92 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQ-NPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLEL 92 (196)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEE-CCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEE
T ss_pred cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccc-ccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEE
Confidence 7899999999999987 7789999999987654211 1111235578999999999999999999999883 3556888
Q ss_pred EEecCCCCCCCC--cceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCC--c-eEEEEeecCcceEEEcCCcCCcE
Q psy12425 84 NITGLPGPPIGP--LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMP--H-WICISTTCHDTTFIVQGLTEGQE 158 (591)
Q Consensus 84 ~v~~~p~~p~~~--~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~--~-~~~~~~~~~~~~~~i~~l~~~~~ 158 (591)
.|...+.+|... .......+..++|.|.... ....|.+.+...... . ............+.|.++...+.
T Consensus 93 ~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~-----~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 167 (196)
T 3p2t_A 93 VMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRS-----PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHG 167 (196)
T ss_dssp EEECSSCCCEEEEESCSEECTTCCEEEEEEEEE-----EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGC
T ss_pred EecCCCCCCEEEeCCcceecCCCeEEEEEecCC-----CCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCC
Confidence 887654444311 0113346788999997432 112333332211110 0 11111223456799999999999
Q ss_pred EEEEEEEEccCCC
Q psy12425 159 YLFHVMAVNENGM 171 (591)
Q Consensus 159 y~~~~~a~n~~g~ 171 (591)
+.|+|.|.|..+.
T Consensus 168 G~Y~C~a~n~~~~ 180 (196)
T 3p2t_A 168 GTYRCFSSHGFSH 180 (196)
T ss_dssp EEEEEEEECGGGT
T ss_pred CeEEEEEEcCCCC
Confidence 9999999998763
No 354
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.61 E-value=5.9e-15 Score=128.94 Aligned_cols=166 Identities=14% Similarity=0.204 Sum_probs=98.8
Q ss_pred cccceeccccEEEEEEEcCCC--CCeeEEecCCc--cCC-----------------CCCceEEEEe--CCeEEEEEccee
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTISWLKGSR--EIT-----------------PSARHHIFAE--GDTYTLIINSVY 356 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v~W~~~~~--~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~ 356 (591)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++... ... ...++.+..+ ....+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (257)
T 3bn9_D 8 GGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR 87 (257)
T ss_dssp CCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC
T ss_pred CCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC
Confidence 345688999999999998876 67899988531 110 1235555544 356799999999
Q ss_pred cccceEEEEEEEeCCcc-------------eeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeecc-CCC
Q psy12425 357 GVDADEYVCRAVNKGGV-------------KSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP 418 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~-------------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~ 418 (591)
.+|+|.|.|.+.+..|. ......|.|.. +|.+..... ...+..|+.+.|.|.+.+. |.+
T Consensus 88 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p---~~~~~~g~~v~L~C~~~g~~P~p 164 (257)
T 3bn9_D 88 AEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAP---SSKSTSGGTAALGCLVKDYFPEP 164 (257)
T ss_dssp GGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC--------------CCCEEEEEBSSC
T ss_pred hhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecC---cccccCCCcEEEEEEEeeEECCC
Confidence 99999999999997651 12335777764 233332111 1124578999999999986 777
Q ss_pred -eEEEeeCCeEeeeccceEEEecCC----eeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 419 -KITWYRDNEVIESGGHFHVETSER----HAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 419 -~v~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
.|.|++++..+.......+...+. ...|.|.....++ |.|+|.|.|....
T Consensus 165 i~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~ 219 (257)
T 3bn9_D 165 VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 219 (257)
T ss_dssp CEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGT
T ss_pred cEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCC
Confidence 999999987642111101111111 3457777777777 9999999997544
No 355
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.61 E-value=6.1e-15 Score=108.33 Aligned_cols=86 Identities=23% Similarity=0.270 Sum_probs=74.8
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCc-eeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDR-FKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|++..+....+ +.+...+...+|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~ 91 (99)
T 1u2h_A 12 LMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCE 91 (99)
T ss_dssp CCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEE
Confidence 5678999999999999999999999999999999876643 344445556789999999999999999999999999888
Q ss_pred EEEEEec
Q psy12425 81 FTINITG 87 (591)
Q Consensus 81 ~~l~v~~ 87 (591)
+.|.|..
T Consensus 92 ~~l~V~~ 98 (99)
T 1u2h_A 92 ARLEVRG 98 (99)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 8888864
No 356
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=1.4e-14 Score=109.42 Aligned_cols=101 Identities=18% Similarity=0.235 Sum_probs=90.6
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+.......+|.|.++...|+|.|+|.|.|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 57888888888889999999999999999999999999999998888888877666789999999999999999999999
Q ss_pred CcceeeeeEEEEecCCcccCC
Q psy12425 371 GGVKSTKAELIIMTAPKFNVP 391 (591)
Q Consensus 371 ~g~~~~~~~l~v~~~p~~~~~ 391 (591)
.|.....+.|.|...|..+..
T Consensus 86 ~g~~~~~~~l~V~~~p~~P~~ 106 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDKPDPPAG 106 (114)
T ss_dssp SCEEECCEEEEEECSCSCCCC
T ss_pred CCcEEEEEEEEEECCCCCCCC
Confidence 999989999999987765543
No 357
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.61 E-value=4.1e-15 Score=113.41 Aligned_cols=97 Identities=29% Similarity=0.465 Sum_probs=82.9
Q ss_pred cCCCCCCCCCeee-eecCCeeEEEeeccccCCCcceeeEEEEeeeCCC-CceEEeceeeeeEEEEcCcccCceEEEEEEE
Q psy12425 479 SDRPDPPQFPTVE-DIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM-SSWIRVGNTRFTTMAITGLSPGHQYEFRVYA 556 (591)
Q Consensus 479 ~~~p~~p~~~~~~-~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A 556 (591)
.+.|.+|..+.+. ..+.+++.|+|++|..+++..+.+|.|+++.... ..|..+.....+.+++.+|.+++.|.|+|+|
T Consensus 15 ~~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A 94 (120)
T 2crm_A 15 PDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLRVYC 94 (120)
T ss_dssp CCCCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEECSSCSEEEECSCCTTSCEEEEEEE
T ss_pred CCCCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEeccccEEEECCCCCCCEEEEEEEE
Confidence 4678888888887 7889999999999887777889999999988765 5888876666789999999999999999999
Q ss_pred EcCCcCCCCCCCcceEEecc
Q psy12425 557 ENVYGRSDPSTTSDLITTYG 576 (591)
Q Consensus 557 ~n~~G~~~~s~~~~~~~t~~ 576 (591)
.|.+|.|++|..+.+ +|.+
T Consensus 95 ~n~~G~s~~S~~~~~-~T~~ 113 (120)
T 2crm_A 95 ISDGGQSAVSESLLV-QTPA 113 (120)
T ss_dssp EETTEECCCCCCCCC-CCCC
T ss_pred EcCCccCCCcccEEE-EcCC
Confidence 999999999987654 4443
No 358
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=9e-15 Score=108.03 Aligned_cols=86 Identities=19% Similarity=0.266 Sum_probs=75.4
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCC--ceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD--RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~ 79 (591)
|.++.+.+|+++.|.|.+.+ |.+.+.|+|+|..+.... ++++...+....|.|.+++.+|+|.|+|.|.| ...
T Consensus 14 ~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~ 88 (103)
T 1x44_A 14 LEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG----GQS 88 (103)
T ss_dssp CCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT----EEE
T ss_pred CCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC----CcE
Confidence 56789999999999999987 779999999999998887 66888777778999999999999999999987 466
Q ss_pred EEEEEEecCCCCC
Q psy12425 80 TFTINITGLPGPP 92 (591)
Q Consensus 80 ~~~l~v~~~p~~p 92 (591)
.+.|.|...|.++
T Consensus 89 ~~~l~V~~~p~p~ 101 (103)
T 1x44_A 89 SAKLSVDLKSGPS 101 (103)
T ss_dssp EEEEEEECCCSCC
T ss_pred EEEEEEeCCCCCC
Confidence 7888888877654
No 359
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.61 E-value=2.1e-14 Score=128.29 Aligned_cols=180 Identities=13% Similarity=0.190 Sum_probs=118.2
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCc--cC--------------C---CCCceEEEEe-CCeEEEE
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSR--EI--------------T---PSARHHIFAE-GDTYTLI 351 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~--~~--------------~---~~~~~~~~~~-~~~~~l~ 351 (591)
.+.+...+..+.+.+|+.+.|.|.+.+.+.+.+.|+++.. .. . ...++.+..+ +...+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 3445555667789999999999999888889999998531 10 0 1235555542 4567899
Q ss_pred EcceecccceEEEEEEEeCCc------ceeeeeEEEEecCCcccCCCCcc----cceeecCCCeEEEEEeeecc-CC-Ce
Q psy12425 352 INSVYGVDADEYVCRAVNKGG------VKSTKAELIIMTAPKFNVPPRFR----DTAYFDKGENVVVKIPFTGY-PK-PK 419 (591)
Q Consensus 352 i~~~~~~d~g~y~c~a~n~~g------~~~~~~~l~v~~~p~~~~~~~~~----~~~~~~~g~~~~l~c~~~~~-p~-~~ 419 (591)
|.+++.+|+|.|+|.+.|..+ .......|.|........+|... ....+..|+.+.|.|.+.+. |. +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 999999999999999999432 11233567776532211122111 11123468999999999987 43 69
Q ss_pred EEEeeCCeEeeeccceE---EE----ecCC----eeEEEEeccCCC-cceeEEEEEEcCCCccc
Q psy12425 420 ITWYRDNEVIESGGHFH---VE----TSER----HAILTIRDASNV-DTAPYRVVAENDLGMDS 471 (591)
Q Consensus 420 v~W~~~~~~~~~~~~~~---~~----~~~~----~~~l~i~~~~~~-~~g~y~c~a~n~~g~~~ 471 (591)
|.|+++|..+..+.... .. ..+. ...|.|...... +.+.|+|.|.|......
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCTT
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCCC
Confidence 99999998876432211 00 0111 234777776665 46789999999876554
No 360
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.61 E-value=6.8e-15 Score=111.85 Aligned_cols=101 Identities=32% Similarity=0.405 Sum_probs=85.6
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCC-CceEEeceeeeeEEEEcCcccCceEEEEEEEEc
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM-SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAEN 558 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n 558 (591)
.+|.+|.++.+...+.+++.|+|.+|. +++..+.+|.|+++.... ..|..........+++.+|.+++.|.|+|+|.|
T Consensus 16 ~~P~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n 94 (118)
T 1x3d_A 16 CEPDIPNPPRIANRTKNSLTLQWKAPS-DNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARN 94 (118)
T ss_dssp SCCCCCCCCEEEEEETTEEEEECCCCC-CCSSCEEEEEEEECTTTSSSCCEEEEEESCSEEEEESCCTTCEEEEECCEEE
T ss_pred CCCcCCCCcEEeccCCCEEEEEECCCC-CCCCcceEEEEEEecCCCCCCeEEeeccCCcEEEeCCCCCCCEEEEEEEEEE
Confidence 578899999999999999999999886 566789999999987665 678777666668999999999999999999999
Q ss_pred CCcCCCCCCCcceEEeccccccCC
Q psy12425 559 VYGRSDPSTTSDLITTYGELLSGM 582 (591)
Q Consensus 559 ~~G~~~~s~~~~~~~t~~~~p~~~ 582 (591)
..|.|.+|..+.+ +|.+.+|..|
T Consensus 95 ~~G~s~~S~~~~~-~T~~~~P~~P 117 (118)
T 1x3d_A 95 DYGTSGFSEEVLY-YTSGCSGPSS 117 (118)
T ss_dssp SSCBCCCCCCEEE-ECSCCCCCCC
T ss_pred CCCCCCCccCEEE-EcCCCCCccC
Confidence 9999999998764 5665555543
No 361
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.61 E-value=1.1e-14 Score=107.23 Aligned_cols=86 Identities=34% Similarity=0.543 Sum_probs=76.9
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeec--CCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQS--DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSG 79 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~ 79 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|++..+.. ..++.+...+...+|.|.+++.+|+|.|+|.|.|..|..+.
T Consensus 12 ~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 91 (100)
T 3irg_A 12 PSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSA 91 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEE
Confidence 6788999999999999999999999999999999863 45677777777789999999999999999999999999888
Q ss_pred EEEEEEec
Q psy12425 80 TFTINITG 87 (591)
Q Consensus 80 ~~~l~v~~ 87 (591)
.+.|.|..
T Consensus 92 ~~~l~V~~ 99 (100)
T 3irg_A 92 TVNIHIRS 99 (100)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEe
Confidence 88888864
No 362
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.60 E-value=2.1e-15 Score=114.66 Aligned_cols=106 Identities=34% Similarity=0.523 Sum_probs=89.1
Q ss_pred EEEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCC-CCceEEe-ceeeeeEEEEcCcccCceEEE
Q psy12425 475 KIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP-MSSWIRV-GNTRFTTMAITGLSPGHQYEF 552 (591)
Q Consensus 475 ~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~-~~~~~~~-~~~~~~~~~i~~l~~~~~Y~~ 552 (591)
......+|.+|.++.+...+.+++.|+|.+|. +++..+.+|.|+++... ...|..+ .......+++.+|.+++.|.|
T Consensus 9 ~~~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~f 87 (117)
T 1uem_A 9 NYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGT-PGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLF 87 (117)
T ss_dssp CCCSCCSCBCCCCCEEEEECSSCEEEECCCCB-CSSSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEE
T ss_pred cCCCCCCccCCCCCEEEEecCCEEEEEEeCCC-CCCcCceEEEEEEEECCCCCceeEcccccCcCEEEECCCCCCCEEEE
Confidence 34456789999999999999999999999887 66778999999998764 5677765 344667999999999999999
Q ss_pred EEEEEcCCcCCCCCCCcceEEeccccccC
Q psy12425 553 RVYAENVYGRSDPSTTSDLITTYGELLSG 581 (591)
Q Consensus 553 ~v~A~n~~G~~~~s~~~~~~~t~~~~p~~ 581 (591)
+|+|.|..|.|.+|..+..++|.+++|..
T Consensus 88 rV~A~n~~G~s~~S~~~~~v~t~~~~P~~ 116 (117)
T 1uem_A 88 MVRAINPQGLSDPSPMSDPVRTQDSGPSS 116 (117)
T ss_dssp EEEEEETTEEEEECCCCCCEECCCSSCCC
T ss_pred EEEEECCCccCCCcCCCccEEccCCCCCC
Confidence 99999999999999988767887766653
No 363
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.60 E-value=7.1e-16 Score=112.33 Aligned_cols=97 Identities=24% Similarity=0.269 Sum_probs=79.7
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEec---eeeeeEEEEcCcccCceEEEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVG---NTRFTTMAITGLSPGHQYEFRVYA 556 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~---~~~~~~~~i~~l~~~~~Y~~~v~A 556 (591)
.+|++|.++.+.. ..+++.|+|++|. +++++|++|.|+|+. ....|.... ....+.+.+.+|.+++.|.|||.|
T Consensus 6 ep~~pP~~l~v~~-~~~sv~L~W~pP~-~~~~~I~gY~vey~~-~~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A 82 (108)
T 1v5j_A 6 SGLSPPRGLVAVR-TPRGVLLHWDPPE-LVPKRLDGYVLEGRQ-GSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVA 82 (108)
T ss_dssp CCCCCCEEEEEEE-CSSSEEEEEECCS-CCSSCCCBEEEEEEE-TTCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEE
T ss_pred CCCCCCcceEEEE-eCCEEEEEECCCC-CCCCCCcEEEEEEEe-CCCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 5678888888876 5678999999987 477799999999998 556787653 346689999999999999999999
Q ss_pred EcCCcCCCCCCCcceEEeccccc
Q psy12425 557 ENVYGRSDPSTTSDLITTYGELL 579 (591)
Q Consensus 557 ~n~~G~~~~s~~~~~~~t~~~~p 579 (591)
.|.+|.|++|....+.|.....|
T Consensus 83 ~n~~G~s~pS~~~~v~T~~~~~~ 105 (108)
T 1v5j_A 83 FAGSFVSDPSNTANVSTSGLSGP 105 (108)
T ss_dssp EETTEEEEECSCCCCCCSSCSSC
T ss_pred EcCCCCcCCCCCEEEEeCCcccC
Confidence 99999999999877655544444
No 364
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.60 E-value=8.6e-16 Score=113.82 Aligned_cols=85 Identities=24% Similarity=0.421 Sum_probs=78.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|+|..+....++.+...+...+|.|.+++.+|+|.|+|.|.|..|..+..+
T Consensus 21 p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 100 (106)
T 1nct_A 21 PRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEF 100 (106)
T ss_dssp CCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEE
T ss_pred CCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEE
Confidence 67899999999999999999999999999999999888888887777778999999999999999999999999988888
Q ss_pred EEEEe
Q psy12425 82 TINIT 86 (591)
Q Consensus 82 ~l~v~ 86 (591)
.|.|.
T Consensus 101 ~l~V~ 105 (106)
T 1nct_A 101 TLTIQ 105 (106)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 88875
No 365
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.60 E-value=8.3e-15 Score=109.37 Aligned_cols=92 Identities=11% Similarity=0.143 Sum_probs=73.4
Q ss_pred CceeeeecCCeEEEEEEeccC---CCceEEEEECCEE-ee--cCCceeEEEeC------CeEEEEEcccCCCCceEEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGD---QPMEVSLTKNGRV-VQ--SDDRFKFTVLD------DYIIIFIKEIRKEDAGDYTVN 69 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~---p~~~v~W~~~~~~-~~--~~~~~~~~~~~------~~~~l~i~~~~~~d~g~Y~c~ 69 (591)
|+++.|.+|++++|.|.+.|. |.|.|.|||+... +. ...++.+.... ...+|.|.+++++|+|.|+|.
T Consensus 14 P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Ce 93 (126)
T 2dav_A 14 PQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCE 93 (126)
T ss_dssp CCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEE
T ss_pred CCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEE
Confidence 788999999999999999875 8999999997521 11 12444443211 147899999999999999999
Q ss_pred EEcCCeeeEEEEEEEEec-CCCCCC
Q psy12425 70 LSNSSGSVSGTFTINITG-LPGPPI 93 (591)
Q Consensus 70 ~~n~~g~~~~~~~l~v~~-~p~~p~ 93 (591)
|.|..|..+..+.|.|.. ++..|.
T Consensus 94 vsn~~g~~~~~~~L~V~~~~~~~p~ 118 (126)
T 2dav_A 94 VTYKDKFDSCSFDLEVHESTGTTPN 118 (126)
T ss_dssp EECSSCEEEECCEEEEECCCCSCCC
T ss_pred EEeCCCcEEEEEEEEEEecCCCCCe
Confidence 999999999999999999 555554
No 366
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=1.4e-15 Score=114.33 Aligned_cols=92 Identities=23% Similarity=0.334 Sum_probs=81.0
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEe-CCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVL-DDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|++..+....+..+... +...+|.|.+++.+|+|.|+|.|.|..|..+..
T Consensus 16 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 95 (110)
T 2dm3_A 16 PGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFS 95 (110)
T ss_dssp CCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEEC
T ss_pred CCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEE
Confidence 6788999999999999999999999999999998877765554443 335799999999999999999999999999999
Q ss_pred EEEEEecCCCCCC
Q psy12425 81 FTINITGLPGPPI 93 (591)
Q Consensus 81 ~~l~v~~~p~~p~ 93 (591)
+.|.|...|.+|.
T Consensus 96 ~~l~V~~~p~~P~ 108 (110)
T 2dm3_A 96 LELVVAAKESGPS 108 (110)
T ss_dssp CEEEEECCCCSSS
T ss_pred EEEEEeCCCCCCC
Confidence 9999999888775
No 367
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.60 E-value=1.5e-15 Score=129.78 Aligned_cols=164 Identities=20% Similarity=0.241 Sum_probs=116.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEe----------ec--CCceeEEEeCCeEEEEEcccCCCCceEEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVV----------QS--DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVN 69 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~----------~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~ 69 (591)
|..+.+.+|+++.|.|.+.+.|.+.+.|+|++..+ .. ..++.+ .+ ..|.|.+++.+|+|.|+|.
T Consensus 11 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~--~~L~i~~~~~~d~G~Y~C~ 86 (209)
T 1nbq_A 11 EPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTF--LP--TGITFKSVTREDTGTYTCM 86 (209)
T ss_dssp CSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEE--ET--TEEECSCCCTTSCSEEEEE
T ss_pred CCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEe--ec--cEEEEeeCCHHHCcEEEEE
Confidence 56788999999999999999999999999987652 11 223332 22 5899999999999999999
Q ss_pred EEcCCe--eeEEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCce---------EE
Q psy12425 70 LSNSSG--SVSGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHW---------IC 138 (591)
Q Consensus 70 ~~n~~g--~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~---------~~ 138 (591)
+.|..| ..+..+.|.|...|..+..+.......+..+.|.|.... +.+...+.+.+....-... ..
T Consensus 87 ~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~---~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 163 (209)
T 1nbq_A 87 VSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQD---GSPPSEYTWFKDGIVMPTNPKSTRAFSNSS 163 (209)
T ss_dssp EEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCS---CBSCCEEEEEETTCCCCSCSSSSSSCTTCC
T ss_pred EecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCC---CCCCceeEEEECCeeCCCccccceeeeccc
Confidence 999865 345678889988888777655555667889999998522 2232233333221100000 00
Q ss_pred EEeecCcceEEEcCCcCCcEEEEEEEEEccCCCC
Q psy12425 139 ISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGMG 172 (591)
Q Consensus 139 ~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~ 172 (591)
.........+.|.++...+.+.|+|.|.|..|..
T Consensus 164 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 164 YVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp CCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred eEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 0001245689999999999999999999998875
No 368
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.60 E-value=5.2e-15 Score=125.67 Aligned_cols=163 Identities=12% Similarity=0.173 Sum_probs=97.4
Q ss_pred eccccEEEEEEEcCCC----CCeeEEecCCccCCCCCc-eEEEEeCCeE----EEEEcceecccceEEEEEEEeCCccee
Q psy12425 305 IQNHNAQFQCTITGCP----KPTISWLKGSREITPSAR-HHIFAEGDTY----TLIINSVYGVDADEYVCRAVNKGGVKS 375 (591)
Q Consensus 305 ~~g~~~~l~c~~~~~p----~~~v~W~~~~~~~~~~~~-~~~~~~~~~~----~l~i~~~~~~d~g~y~c~a~n~~g~~~ 375 (591)
..|+.+.|.|.+.|.+ .+.|.|++++..+..... ......++.+ .|.|......|+|.|+|.|.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 6899999999998865 359999999876654321 1111122221 122333333449999999999877643
Q ss_pred eeeEE----EEecCCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeCCeEeeeccceEEEec-CC----ee
Q psy12425 376 TKAEL----IIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRDNEVIESGGHFHVETS-ER----HA 444 (591)
Q Consensus 376 ~~~~l----~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~~~~~~~~~~~~-~~----~~ 444 (591)
....+ .+..+|.+...+.. ... ..+..+.|.|.+.|. |. +.|.|+++|..+........... +. ..
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~--~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s 172 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPS--RDE-LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYS 172 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCC--GGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEE
T ss_pred eEEEeccCCCCCcCCEEEEECCC--hHH-hcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEE
Confidence 33233 22334444322211 111 245669999999985 54 49999999988753222111111 11 12
Q ss_pred EEEEeccCCCcceeEEEEEEcCCCcc
Q psy12425 445 ILTIRDASNVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 445 ~l~i~~~~~~~~g~y~c~a~n~~g~~ 470 (591)
.|.|......|.|.|+|.|.|.....
T Consensus 173 ~l~i~~~~~~~~g~YtC~a~n~~l~~ 198 (207)
T 1l6x_A 173 KLTVDKSRWQQGNVFSCSVMHEALHN 198 (207)
T ss_dssp EEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred EEEECHHHcCCCCEEEEEEEcCCcCC
Confidence 34455555567899999999986543
No 369
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.60 E-value=2.7e-14 Score=121.75 Aligned_cols=132 Identities=17% Similarity=0.207 Sum_probs=103.6
Q ss_pred CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecC---CCC-CCCCCeeeee--cCCeeEEEeeccccCCCccee
Q psy12425 441 ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD---RPD-PPQFPTVEDI--GHDSLALVWRAPIWDGGSNIT 514 (591)
Q Consensus 441 ~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~---~p~-~p~~~~~~~~--~~~~v~l~W~~p~~~~~~~~~ 514 (591)
.....+.|.+|.+...|.|++.|.|..|.+..+..+.+.. .|. +|.++.+... +.+++.|+|++|...+ +.+.
T Consensus 61 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~-g~i~ 139 (211)
T 3p4l_A 61 ATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEAN-GKIT 139 (211)
T ss_dssp ESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCC-SCCC
T ss_pred CCceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCC-CCEE
Confidence 3466899999999999999999999998775444344443 344 7777777776 4789999999886444 4899
Q ss_pred eEEEEeeeCCCC---ceEE-eceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEE
Q psy12425 515 NYIVEKREHPMS---SWIR-VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 573 (591)
Q Consensus 515 ~y~v~~~~~~~~---~~~~-~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~ 573 (591)
+|.|+++..... .|.. ......+.++|.+|.+++.|.|+|+|.|..|.|++|.++.+.+
T Consensus 140 ~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~ 202 (211)
T 3p4l_A 140 GYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRT 202 (211)
T ss_dssp EEEEEEESCTTSCGGGSEEEEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred EEEEEEEECCCCCCCceEEEEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccC
Confidence 999999876543 3332 2445667999999999999999999999999999999865543
No 370
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.60 E-value=4.7e-15 Score=112.89 Aligned_cols=95 Identities=25% Similarity=0.337 Sum_probs=77.5
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEe-----ceeeeeEEEEcCcccCceEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-----GNTRFTTMAITGLSPGHQYEFRV 554 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~-----~~~~~~~~~i~~l~~~~~Y~~~v 554 (591)
+.|.+|.++.+...+.+ +.|+|++|..++|.+|.+|.|+|+......|... .....+.++|.+|.+++.|.|+|
T Consensus 6 ~~P~~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV 84 (122)
T 2e3v_A 6 SGPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRL 84 (122)
T ss_dssp CCCCCCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEE
T ss_pred cCCcCCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEE
Confidence 57888988888887777 9999999987788779999999998887778322 12345789999999999999999
Q ss_pred EEEcCCcCCCCCCCcceEEecc
Q psy12425 555 YAENVYGRSDPSTTSDLITTYG 576 (591)
Q Consensus 555 ~A~n~~G~~~~s~~~~~~~t~~ 576 (591)
+|.|.+|.|++|....+ ++.+
T Consensus 85 ~A~n~~G~g~~S~~~~~-~t~~ 105 (122)
T 2e3v_A 85 AALNGKGLGEISAASEF-KTQP 105 (122)
T ss_dssp EEEETTEECCCCCCEEE-ECCC
T ss_pred EEEeCCccCCCcccccc-cccC
Confidence 99999999999998766 4443
No 371
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.59 E-value=1.3e-14 Score=122.51 Aligned_cols=147 Identities=14% Similarity=0.068 Sum_probs=103.6
Q ss_pred CceeeeecCCeEEEEEEeccCCCce-EEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPME-VSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.+.|.+. +.|+|+|..+.... ..|.|.+++.+|+|.|+|.+.|. ..+..
T Consensus 14 p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n~--~~s~~ 81 (204)
T 3sgj_C 14 PQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQLS--TLSDP 81 (204)
T ss_dssp SCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETTS--BCCCC
T ss_pred CCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCCC--ccccc
Confidence 4557899999999999999987765 99999999886543 48999999999999999999874 34556
Q ss_pred EEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEE
Q psy12425 81 FTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 160 (591)
Q Consensus 81 ~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 160 (591)
+.|.|...|.....+ ......+..+.|.|.... +.+...+.+.+ .+. .+........+.|.++...+.+.
T Consensus 82 ~~l~V~~~p~~~~~~-~~~v~~G~~v~L~C~~~~---~~p~~~v~W~k--~g~----~~~~~~~~~~L~i~~v~~~D~G~ 151 (204)
T 3sgj_C 82 VQLEVHIGWLLLQAP-RWVFKEEDPIHLRCHSWK---NTALHKVTYLQ--NGK----GRKYFHHNSDFYIPKATLKDSGS 151 (204)
T ss_dssp EEEEEECSSEEEECS-CSEEETTCCEEEEEEEGG---GCCCEEEEEEE--TTE----EEEEEEECCCEEESSCCGGGCEE
T ss_pred EEEEEecCceEecCC-ceeEeCCCcEEEEEEecC---CCCCceEEEEE--CCc----EeecccCCceEEECcCCcccCEE
Confidence 777777655322222 234446888999997532 11222233221 111 11112345689999999999999
Q ss_pred EEEEEEccCC
Q psy12425 161 FHVMAVNENG 170 (591)
Q Consensus 161 ~~~~a~n~~g 170 (591)
|+|.|.|..+
T Consensus 152 Y~C~a~n~~~ 161 (204)
T 3sgj_C 152 YFCRGLVGSK 161 (204)
T ss_dssp EEEEEEETTE
T ss_pred EEEEEEeCCC
Confidence 9999999533
No 372
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.59 E-value=1.2e-12 Score=108.32 Aligned_cols=242 Identities=14% Similarity=0.163 Sum_probs=152.7
Q ss_pred EEeeccccceeccccEEEEEEEc-CCC---CCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 295 IIVPLRNANAIQNHNAQFQCTIT-GCP---KPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 295 ~~~~~~~~~~~~g~~~~l~c~~~-~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
+...|....+..|+.++|+|.+. |.| ...++|+|++..+.. ....|.+..+...++|.|+|.+.+.
T Consensus 5 Vs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG----------aT~tLti~s~t~sdSG~YqCvVTDa 74 (304)
T 3shs_A 5 VSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN----------NTATLTVADATSENAGSYKVTVQDT 74 (304)
T ss_dssp EEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC----------CSSEEEESSCCGGGCEEEEEEEEET
T ss_pred EEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC----------CcceEEeeeccccCCeEEEEEEEEC
Confidence 34445667789999999999985 456 458999999877543 2226889999999999999999999
Q ss_pred CcceeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEee--ec-cC-----CCeEEEeeCCeEeeeccceEEEecCC
Q psy12425 371 GGVKSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPF--TG-YP-----KPKITWYRDNEVIESGGHFHVETSER 442 (591)
Q Consensus 371 ~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~--~~-~p-----~~~v~W~~~~~~~~~~~~~~~~~~~~ 442 (591)
.|....+..+.|...+.+......+....+..+..+.|.+.+ .| .| ..+++|++++..+. .
T Consensus 75 ~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Is-----------g 143 (304)
T 3shs_A 75 DTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVID-----------T 143 (304)
T ss_dssp TTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEE-----------S
T ss_pred CCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEcc-----------C
Confidence 887765555555554332111111233345667888998887 43 34 46999999997653 3
Q ss_pred eeEEEEeccCCCcceeEEEEEEcCCCcc--ceEEEEEecCCCCCCCCCee-eeecCCeeEEEeeccc----cCCCcc--e
Q psy12425 443 HAILTIRDASNVDTAPYRVVAENDLGMD--SAIVKIQISDRPDPPQFPTV-EDIGHDSLALVWRAPI----WDGGSN--I 513 (591)
Q Consensus 443 ~~~l~i~~~~~~~~g~y~c~a~n~~g~~--~~~~~~~v~~~p~~p~~~~~-~~~~~~~v~l~W~~p~----~~~~~~--~ 513 (591)
...|++..+...++|.|+|.+.|..|.. +..+.+.+.+.+-+-..+.- ....++.+.|..-... +..|.+ .
T Consensus 144 Aq~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (304)
T 3shs_A 144 TQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLT 223 (304)
T ss_dssp SSEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEE
T ss_pred ccccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceE
Confidence 4467777888899999999999998754 55555666554433332222 2234556666554322 122222 3
Q ss_pred eeEEEEeeeCCCCceEEece---e--------eeeEEEEcCcccCceEEEEEEEE
Q psy12425 514 TNYIVEKREHPMSSWIRVGN---T--------RFTTMAITGLSPGHQYEFRVYAE 557 (591)
Q Consensus 514 ~~y~v~~~~~~~~~~~~~~~---~--------~~~~~~i~~l~~~~~Y~~~v~A~ 557 (591)
..|.++.+..+...-..++. . ....+.-....-.+.-.|.|.|.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 224 IKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp EEEEEEEECTTCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEEEeecCccCchhhhhhhhhhhccceeCCCcceeecccccccchheeeHHH
Confidence 46777666555443333211 0 11123333445556778888874
No 373
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.59 E-value=4.7e-14 Score=124.07 Aligned_cols=242 Identities=11% Similarity=0.039 Sum_probs=108.7
Q ss_pred ccccceeccccEEEEEEEcCCCCCeeEEecC--CccC-CCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCccee
Q psy12425 299 LRNANAIQNHNAQFQCTITGCPKPTISWLKG--SREI-TPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 375 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~--~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~ 375 (591)
+.+..+.+|+.+.|+|.+.......+.|... ...+ ..+. ....+.+.++..+ +.|+|.+....-...
T Consensus 6 P~~~~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~g~--------~~~~~~l~~v~~~--~~y~C~~~~~~~~~~ 75 (291)
T 1mq8_A 6 PSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGN--------NRKVYELSNVQED--SQPMCYSNCPDGQST 75 (291)
T ss_dssp CSEEEECTTCEEEEEEEECCSSCSEEEEECSSCCCCCCCSCS--------SEEEEEEESCCSC--CCCEEEEECSSCEEE
T ss_pred CCccEEcCCCeEEEEEeCCCCCCccceEEecCCCcccccCCC--------ceEEEEEEecccC--CeEEEEEEcCCccEE
Confidence 3456789999999999997543334888642 1111 1111 1224778888743 569999975544456
Q ss_pred eeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeeccCC-C--eEEEeeCCeEeeeccceEEEecCCeeEEEEeccC
Q psy12425 376 TKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK-P--KITWYRDNEVIESGGHFHVETSERHAILTIRDAS 452 (591)
Q Consensus 376 ~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~-~--~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 452 (591)
..+.+.|..+|....-.. ....+..|+.++|.|.+.+..+ . .|.|++++..+..... ........|.+....
T Consensus 76 ~~v~l~V~~~P~~v~I~~--~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~---~~~~~~~~l~~~~~~ 150 (291)
T 1mq8_A 76 AKTFLTVYWTPERVELAP--LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRR 150 (291)
T ss_dssp EECEEEECBCCSCCCBCC--CCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC---CBTTEEEEEECCCSS
T ss_pred EEEEEEEecCCCCCEEec--CCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC---CCCCceEEEEeeeee
Confidence 677888888776532211 1133678999999999987544 3 5899999988764321 111223456667677
Q ss_pred CCcceeEEEEEEcCCCc--------cceEEEEEecCCCCCCCCCee--eeecCCeeEEEeeccccCCCcceeeEEEEeee
Q psy12425 453 NVDTAPYRVVAENDLGM--------DSAIVKIQISDRPDPPQFPTV--EDIGHDSLALVWRAPIWDGGSNITNYIVEKRE 522 (591)
Q Consensus 453 ~~~~g~y~c~a~n~~g~--------~~~~~~~~v~~~p~~p~~~~~--~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~ 522 (591)
.++.+.|+|+|.|..+. .+....+.|..+|.....+.. .-..++.++|+|.. ++..+.....+.|..
T Consensus 151 ~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~---~g~~P~~~~~v~w~~ 227 (291)
T 1mq8_A 151 DHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSL---DGLFPVSEAQVHLAL 227 (291)
T ss_dssp SCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC----------------------------------------------
T ss_pred ccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEc---CCCCCCcccEEEEEE
Confidence 77778999999998663 255567777776533221111 11246788999985 232233333444443
Q ss_pred CCCCceEE-eceeeeeEEEEcCc----c-cCceEEEEEEEEcCC
Q psy12425 523 HPMSSWIR-VGNTRFTTMAITGL----S-PGHQYEFRVYAENVY 560 (591)
Q Consensus 523 ~~~~~~~~-~~~~~~~~~~i~~l----~-~~~~Y~~~v~A~n~~ 560 (591)
.+...-.. ...++ .+.+..+ . ....|+++|.|.|..
T Consensus 228 ~g~~l~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 269 (291)
T 1mq8_A 228 GDQRLNPTVTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGN 269 (291)
T ss_dssp --------------------------------------------
T ss_pred CCEecCceeeecCC--eEEEEEecceeEcCCCCEEEEEEEEeCC
Confidence 32211101 11111 2223222 2 356899999998733
No 374
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=1e-14 Score=108.14 Aligned_cols=84 Identities=13% Similarity=0.225 Sum_probs=75.2
Q ss_pred eeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEEEE
Q psy12425 5 LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 84 (591)
Q Consensus 5 ~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~l~ 84 (591)
+.+.+|+++.|.|.+.+.|.+ +.|+|++..+....++.+...+....|.|.+++.+|+|.|+|.|.|.. ..+.|.
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~----~~~~l~ 94 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVS----AFFGVT 94 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCC----CCEEEE
T ss_pred EEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCce----EEEEEE
Confidence 789999999999999999888 999999999988888888888888899999999999999999999873 367888
Q ss_pred EecCCCCCC
Q psy12425 85 ITGLPGPPI 93 (591)
Q Consensus 85 v~~~p~~p~ 93 (591)
|..+|.+|.
T Consensus 95 V~~~P~pp~ 103 (104)
T 2e6p_A 95 VQDPSGPSS 103 (104)
T ss_dssp EECCCCSSC
T ss_pred EcCCCCCcC
Confidence 888887664
No 375
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.58 E-value=1.2e-13 Score=121.61 Aligned_cols=141 Identities=14% Similarity=0.147 Sum_probs=97.9
Q ss_pred ceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCC----------CccCCCeEEeeccccceeccccEEEEEEE
Q psy12425 247 SQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDP----------MAAKAPEIIVPLRNANAIQNHNAQFQCTI 316 (591)
Q Consensus 247 ~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~----------~~~~~p~~~~~~~~~~~~~g~~~~l~c~~ 316 (591)
..|.|.+++..|+|.|.|.+.|..+... .....+.+... ....+|.+...+....+.+|+.+.|.|.+
T Consensus 80 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~ 157 (253)
T 3uzq_A 80 AYLHLSSLTSGDTAVYYCSRGWEGFAYW--GQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRA 157 (253)
T ss_dssp EEEEECSCCGGGCEEEEEEECSSSCCEE--CCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEE
T ss_pred EEEEeCCCCcccCEEEEEEEeeCCccEE--CCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEe
Confidence 4599999999999999999998544321 12344555431 12235677777777889999999999999
Q ss_pred cCCCCC----eeEEecCC--ccCC------------CCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eee
Q psy12425 317 TGCPKP----TISWLKGS--REIT------------PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STK 377 (591)
Q Consensus 317 ~~~p~~----~v~W~~~~--~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~ 377 (591)
.+.+.+ .+.|+++. .... ...++.....+...+|.|.+++.+|+|.|+|.|.|..+.. ...
T Consensus 158 ~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~g 237 (253)
T 3uzq_A 158 SENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGG 237 (253)
T ss_dssp SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCC
T ss_pred cCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCC
Confidence 998886 89999842 2111 1245555566677789999999999999999999976544 344
Q ss_pred eEEEEecCCccc
Q psy12425 378 AELIIMTAPKFN 389 (591)
Q Consensus 378 ~~l~v~~~p~~~ 389 (591)
..|.|...+.+.
T Consensus 238 t~l~v~~~~~~~ 249 (253)
T 3uzq_A 238 TKLEIKRPLEHH 249 (253)
T ss_dssp EEEEECCC----
T ss_pred EEEEEcCCCCCc
Confidence 667776655443
No 376
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.58 E-value=1.2e-13 Score=115.11 Aligned_cols=125 Identities=20% Similarity=0.221 Sum_probs=102.1
Q ss_pred EecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEE
Q psy12425 438 ETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYI 517 (591)
Q Consensus 438 ~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~ 517 (591)
........+.|.+|.+...|.|++.|.|..|. +....+.+...|.+|.++.+...+.+++.|+|.+|. +.+.+|.
T Consensus 52 ~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~~~-s~~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~ 126 (186)
T 1qr4_A 52 EIPVDSTSFILRGLDAGTEYTISLVAEKGRHK-SKPTTIKGSTVVGSPKGISFSDITENSATVSWTPPR----SRVDSYR 126 (186)
T ss_dssp EECTTCSEEEEESCCSSCEEEEEEEEESSSCB-CCCEEEEEECCCCCCSCEEEESCCSSCEEEEECCCS----SCCSEEE
T ss_pred ECCCCCCEEEECCCCCCCEEEEEEEEEcCCcc-CCCEEEEEECCCCCCCccEEEEeCCCEEEEEEECCC----CcccEEE
Confidence 33445678999999999999999999997554 445667777789999999999999999999999863 3689999
Q ss_pred EEeeeCCCCceEEe-ceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCC
Q psy12425 518 VEKREHPMSSWIRV-GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPST 567 (591)
Q Consensus 518 v~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~ 567 (591)
|.|+......+... .......+.|.+|.|++.|.|+|+|.|..|.|++..
T Consensus 127 v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~ 177 (186)
T 1qr4_A 127 VSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPIS 177 (186)
T ss_dssp EEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEECCCEE
T ss_pred EEEEeCCCCCceEEEcCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEE
Confidence 99987765444333 445668999999999999999999999999887643
No 377
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=9e-15 Score=108.93 Aligned_cols=102 Identities=28% Similarity=0.367 Sum_probs=85.1
Q ss_pred ecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCC-ceEEeceeeeeEEEEcCcccCceEEEEEEE
Q psy12425 478 ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS-SWIRVGNTRFTTMAITGLSPGHQYEFRVYA 556 (591)
Q Consensus 478 v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A 556 (591)
+.++|.+|.++.+...+.+++.|+|.++ ++..+.+|.|+|+..... .|..+.......+.|.+|.+++.|.|+|+|
T Consensus 4 ~~~~P~~P~~~~~~~~~~~sv~l~W~~~---~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 80 (106)
T 2dju_A 4 GSSGPKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLA 80 (106)
T ss_dssp CCCSCCCCEEEEEEEEETTEEEEEEECC---CSSCCSEEEEEEEETTCCSCCCCBCCCCSSEEEEESCCTTCEEEEEEEE
T ss_pred CCcCCcCCCCcEEEeccCCEEEEEEcCC---CCCCceEEEEEEEECCCCCCeEEccCCCccEEEEeCCCCCcEEEEEEEE
Confidence 3467899999999988999999999976 345799999999876543 676666566778999999999999999999
Q ss_pred EcCCcCCCCCCCcceEEeccccccCCC
Q psy12425 557 ENVYGRSDPSTTSDLITTYGELLSGME 583 (591)
Q Consensus 557 ~n~~G~~~~s~~~~~~~t~~~~p~~~~ 583 (591)
.|..|.|.+|..+. ++|.+.+|..||
T Consensus 81 ~n~~G~~~~S~~~~-~~T~~~~P~~Pp 106 (106)
T 2dju_A 81 VNSIGRGPPSEAVR-ARTGEQSGPSSG 106 (106)
T ss_dssp ECSSCBCCCCCCEE-EECCCSSCCCCC
T ss_pred EeCCccCCCcccEE-eEcCCCCCCCCC
Confidence 99999999998765 477777777664
No 378
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.58 E-value=4.8e-15 Score=105.20 Aligned_cols=68 Identities=10% Similarity=0.108 Sum_probs=61.9
Q ss_pred eeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcC
Q psy12425 5 LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNS 73 (591)
Q Consensus 5 ~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~ 73 (591)
+.+.+|+++.|.|.+.+ |.+.+.|+|||+.|..+.++++...+...+|.|.+++.+|+|.|+|.|.|.
T Consensus 16 v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 16 VHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp EECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred EEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce
Confidence 45578999999999965 888999999999999999999998888899999999999999999999765
No 379
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.58 E-value=4.2e-14 Score=122.11 Aligned_cols=175 Identities=17% Similarity=0.193 Sum_probs=111.8
Q ss_pred ccccceeccccEEEEEEEcCC--CCCeeEEecCC--ccCC----------------CCCceEEEEeC--CeEEEEEccee
Q psy12425 299 LRNANAIQNHNAQFQCTITGC--PKPTISWLKGS--REIT----------------PSARHHIFAEG--DTYTLIINSVY 356 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~--p~~~v~W~~~~--~~~~----------------~~~~~~~~~~~--~~~~l~i~~~~ 356 (591)
+..+.+.+|+.+.|.|.+.+. +.+.+.|++.. .... ...++.+..+. ...+|.|.+++
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (230)
T 1ypz_F 8 EISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLE 87 (230)
T ss_dssp CSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCC
T ss_pred CCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCC
Confidence 345668899999999999875 56789998742 1110 12344444332 46789999999
Q ss_pred cccceEEEEEEEeC--Cc--ceeeeeEEEEec---------CCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEE
Q psy12425 357 GVDADEYVCRAVNK--GG--VKSTKAELIIMT---------APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKIT 421 (591)
Q Consensus 357 ~~d~g~y~c~a~n~--~g--~~~~~~~l~v~~---------~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~ 421 (591)
.+|+|.|.|.+.+. .. .......|.|.. +|...+.+ .....+..|..+.|.|.+.+. |. +.|.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~--p~~~~v~~g~~~~L~C~~~g~~P~~~~v~ 165 (230)
T 1ypz_F 88 EEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFL--PSVAETNLHKTGTYLCLLEAFFPDVIRVY 165 (230)
T ss_dssp GGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEEC--CCHHHHHHHSCEEEEEEEEEESSCCCEEE
T ss_pred hhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEEC--CCchhhccCCcceEEEEEeeecCCCeEEE
Confidence 99999999999885 11 112345677762 12211110 111223468899999999986 75 5999
Q ss_pred Eee-CCeEeeeccceEEEecCC----eeEEEEeccCCCcceeEEEEEEcCCCccceEEEEE
Q psy12425 422 WYR-DNEVIESGGHFHVETSER----HAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 422 W~~-~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
|++ +|..+.......+...+. .+.|+|..... + |.|+|.|.|..+.......+.
T Consensus 166 W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~~~~~~~~ 224 (230)
T 1ypz_F 166 WKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKGGADQAIF 224 (230)
T ss_dssp EECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTTTSCEEEE
T ss_pred EEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCCceeEeee
Confidence 999 777654221111111111 35688877775 4 999999999987654444443
No 380
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.58 E-value=1.1e-13 Score=120.33 Aligned_cols=170 Identities=14% Similarity=0.232 Sum_probs=107.8
Q ss_pred eeccccceeccccEEEEEEEcCCCCCeeEEecCCcc--C---------------CCCCceEEEE-eCCeEEEEEcceecc
Q psy12425 297 VPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSRE--I---------------TPSARHHIFA-EGDTYTLIINSVYGV 358 (591)
Q Consensus 297 ~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~--~---------------~~~~~~~~~~-~~~~~~l~i~~~~~~ 358 (591)
..+..+.+.+|+.+.|.|.+. .+.+.+.|+++... . ....++.+.. .+...+|.|.+++.+
T Consensus 4 q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~ 82 (238)
T 1bec_A 4 QSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPS 82 (238)
T ss_dssp EECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGG
T ss_pred cCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcc
Confidence 344566789999999999995 45789999985321 0 0123444443 244678999999999
Q ss_pred cceEEEEEEEeCCc---c--eeeeeEEEEecC------CcccCCCCcccceeecCCCeEEEEEeeecc-CCC-eEEEeeC
Q psy12425 359 DADEYVCRAVNKGG---V--KSTKAELIIMTA------PKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PKP-KITWYRD 425 (591)
Q Consensus 359 d~g~y~c~a~n~~g---~--~~~~~~l~v~~~------p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~~-~v~W~~~ 425 (591)
|+|.|.|.+.|..+ . ......|.|... |.+...+. ....+..|+.+.|.|.+.|. |.+ .+.|+++
T Consensus 83 D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~--~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 160 (238)
T 1bec_A 83 QTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEP--SKAEIANKQKATLVCLARGFFPDHVELSWWVN 160 (238)
T ss_dssp GCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECC--CSTTCSSSCSCSEEEEEEEEBSCCEEEEEEET
T ss_pred cCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECC--ChHHcccCCceEEEEEEeeEeCCCcEEEEEEC
Confidence 99999999998742 1 123356777653 33321110 11224578999999999986 654 9999999
Q ss_pred CeEeeeccceE---EEecCCe----eEEEEeccCCC-cceeEEEEEEcCCCc
Q psy12425 426 NEVIESGGHFH---VETSERH----AILTIRDASNV-DTAPYRVVAENDLGM 469 (591)
Q Consensus 426 ~~~~~~~~~~~---~~~~~~~----~~l~i~~~~~~-~~g~y~c~a~n~~g~ 469 (591)
|..+..+.... ....+.. ..|.|...... +.+.|+|.|.|....
T Consensus 161 g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 212 (238)
T 1bec_A 161 GKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLS 212 (238)
T ss_dssp TEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCC
T ss_pred CEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCC
Confidence 98876443211 1111221 22333333322 367899999998543
No 381
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.58 E-value=1.7e-14 Score=121.34 Aligned_cols=159 Identities=14% Similarity=0.160 Sum_probs=100.0
Q ss_pred eeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeee--EEEEE
Q psy12425 5 LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV--SGTFT 82 (591)
Q Consensus 5 ~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~--~~~~~ 82 (591)
..|.+|++++|.|.+.+.|. .+.|+|+|..+....+ ..........|.|.+++.+|+|.|+|.|.|..|.. +..+.
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~ 91 (196)
T 2d3v_A 14 SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLE 91 (196)
T ss_dssp SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEE
T ss_pred CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEE
Confidence 37899999999999988765 9999999987643211 01113355789999999999999999999987754 34578
Q ss_pred EEEecCCCCCCCC--cceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEE-e---ecCcceEEEcCCcCC
Q psy12425 83 INITGLPGPPIGP--LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICIS-T---TCHDTTFIVQGLTEG 156 (591)
Q Consensus 83 l~v~~~p~~p~~~--~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~-~---~~~~~~~~i~~l~~~ 156 (591)
|.|...+..|... .......+..++|.|..... + ..+.+.+............ . ......|.|.++...
T Consensus 92 l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~----p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 166 (196)
T 2d3v_A 92 LVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLR----F-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPS 166 (196)
T ss_dssp EEEECSSCCCEEEC-----------CEEEEEESSC----C-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTT
T ss_pred EEecCCCCCCeEEccCCccccCCCcEEEEEEcCCC----C-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcc
Confidence 8887744333310 11234467789999975432 2 2233332221111111100 0 112368999999999
Q ss_pred cEEEEEEEEEccCC
Q psy12425 157 QEYLFHVMAVNENG 170 (591)
Q Consensus 157 ~~y~~~~~a~n~~g 170 (591)
+.+.|+|.|.|..+
T Consensus 167 D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 167 HRWMLRCYGSRRHI 180 (196)
T ss_dssp BCEEEEEEEEETTE
T ss_pred cCeeEEEEEEccCC
Confidence 99999999998754
No 382
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=4e-15 Score=114.44 Aligned_cols=116 Identities=26% Similarity=0.323 Sum_probs=93.3
Q ss_pred EEEEEEcCCCccceEEEEEec---CCCC-CCCCCeeeeecCCeeEEEeeccccC-CCcceeeEEEEeeeCCCCceEEece
Q psy12425 459 YRVVAENDLGMDSAIVKIQIS---DRPD-PPQFPTVEDIGHDSLALVWRAPIWD-GGSNITNYIVEKREHPMSSWIRVGN 533 (591)
Q Consensus 459 y~c~a~n~~g~~~~~~~~~v~---~~p~-~p~~~~~~~~~~~~v~l~W~~p~~~-~~~~~~~y~v~~~~~~~~~~~~~~~ 533 (591)
++|.|.|..|.+..+..+.+. ..|. +|.++.+...+.+++.|+|++|..+ .++.+.+|.|+|+......|.....
T Consensus 2 ~~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~ 81 (124)
T 2ed9_A 2 SSGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMETLE 81 (124)
T ss_dssp CSCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEEEC
T ss_pred CeEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEEec
Confidence 457788999987555444443 3455 7888999988999999999988653 4558999999999887777766656
Q ss_pred eeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEEec
Q psy12425 534 TRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTY 575 (591)
Q Consensus 534 ~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~ 575 (591)
.....+.|.+|.|++.|.|+|+|.|..|.|++|....+ +|.
T Consensus 82 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~-~T~ 122 (124)
T 2ed9_A 82 PNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTA-ETP 122 (124)
T ss_dssp SSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEE-ECC
T ss_pred CCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEE-ECC
Confidence 66789999999999999999999999999999988654 443
No 383
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=5.6e-15 Score=109.18 Aligned_cols=93 Identities=27% Similarity=0.373 Sum_probs=77.6
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEE----e-ceeeeeEEEEcCcccCceEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIR----V-GNTRFTTMAITGLSPGHQYEFRV 554 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~----~-~~~~~~~~~i~~l~~~~~Y~~~v 554 (591)
+.|++|..+.+...+.. +.|+|++|..++|.+|.+|+|+|+......|.. + .....+.++|.+|.|++.|.|+|
T Consensus 5 ~~P~~P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV 83 (105)
T 2haz_A 5 DTPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRL 83 (105)
T ss_dssp CCCCCCEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEE
T ss_pred CCCcCCCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEEE
Confidence 57888888888887777 999999998778877999999999887776742 2 12255789999999999999999
Q ss_pred EEEcCCcCCCCCCCcceEE
Q psy12425 555 YAENVYGRSDPSTTSDLIT 573 (591)
Q Consensus 555 ~A~n~~G~~~~s~~~~~~~ 573 (591)
+|.|.+|.|++|....+.|
T Consensus 84 ~A~n~~G~g~~S~~~~~~T 102 (105)
T 2haz_A 84 AALNGKGLGEISAASEFKT 102 (105)
T ss_dssp EEEETTEECCCCCCEEEEC
T ss_pred EEEcCCccCCCcCCEeeEE
Confidence 9999999999999876533
No 384
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=6.7e-15 Score=108.37 Aligned_cols=87 Identities=18% Similarity=0.326 Sum_probs=75.9
Q ss_pred CceeeeecCCeEEEEEEeccCCC-ceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQP-MEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|.++.+.+|+++.|.|.+.+.|. +.+.|+|||..+..+.++++...+...+|.|.+++.+|+|.|+|.|.| ...+
T Consensus 15 ~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~ 90 (104)
T 2eny_A 15 LKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG----LTSK 90 (104)
T ss_dssp CCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT----EEEE
T ss_pred CCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC----eeEE
Confidence 56789999999999999998774 489999999999888899888888888999999999999999999854 4567
Q ss_pred EEEEEecCCCCC
Q psy12425 81 FTINITGLPGPP 92 (591)
Q Consensus 81 ~~l~v~~~p~~p 92 (591)
+.|.|..+|..+
T Consensus 91 a~L~V~~~p~~~ 102 (104)
T 2eny_A 91 ASLIVRERSGPS 102 (104)
T ss_dssp ECEEEECCCSSC
T ss_pred EEEEEeCCCcCC
Confidence 889998877544
No 385
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=8.9e-15 Score=108.19 Aligned_cols=87 Identities=13% Similarity=0.313 Sum_probs=77.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+.+ |.+.+.|+|++..+....++.+...+....|.|.+++.+|+|.|+|.|.| ....+
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~ 89 (103)
T 2edf_A 15 LEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA----SKSTA 89 (103)
T ss_dssp CCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS----CEEEE
T ss_pred CCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc----CCcEE
Confidence 56789999999999999997 78899999999999888888888888888999999999999999999998 36778
Q ss_pred EEEEecCCCCCC
Q psy12425 82 TINITGLPGPPI 93 (591)
Q Consensus 82 ~l~v~~~p~~p~ 93 (591)
.|.|...|.+|.
T Consensus 90 ~l~V~~~p~~~~ 101 (103)
T 2edf_A 90 SLHVEEKASGPS 101 (103)
T ss_dssp EEEECCCSSSSC
T ss_pred EEEEeCCCCCCC
Confidence 899988877654
No 386
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.57 E-value=1.3e-14 Score=145.01 Aligned_cols=165 Identities=15% Similarity=0.219 Sum_probs=117.1
Q ss_pred cceeccccEEEEEEE-cCCCCCeeEEecCCccCCC------------CCceEEEEeCCeEEEEEcceecccceEEEEEEE
Q psy12425 302 ANAIQNHNAQFQCTI-TGCPKPTISWLKGSREITP------------SARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 302 ~~~~~g~~~~l~c~~-~~~p~~~v~W~~~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
..+..|+.+.|.|.+ .+.|.+.+.|++++..+.. ..+..+..++ +|.|.+++.+|+|.|+|.+.
T Consensus 376 ~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y~C~~~ 452 (581)
T 3o3u_N 376 ITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIFRCQAM 452 (581)
T ss_dssp EEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEEEEEEE
T ss_pred cceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEEEEEEE
Confidence 457789999999999 8899999999997653211 1233333333 79999999999999999999
Q ss_pred eCCcce-eeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeec-cCCCeEEEeeCCeEeeecc-ceEEE----e--
Q psy12425 369 NKGGVK-STKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTG-YPKPKITWYRDNEVIESGG-HFHVE----T-- 439 (591)
Q Consensus 369 n~~g~~-~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~~v~W~~~~~~~~~~~-~~~~~----~-- 439 (591)
|..|.. ...+.|.|..+|..+.... ........+..+.|.|.+.+ .|.|.+.|+++|..+.... .+.+. .
T Consensus 453 n~~~~~~~~~~~l~V~~~~~~p~i~~-~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~ 531 (581)
T 3o3u_N 453 NRNGKETKSNYRVRVYQIPGKPEIVD-SASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHP 531 (581)
T ss_dssp CTTSCEEEEEEEEEEEBCCCCCEEES-CCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECT
T ss_pred cCCCceeEEEEEEEEEcCCCCCEEEc-CCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcC
Confidence 999887 6778888887554321111 01112233445567999988 5999999999999886432 22221 1
Q ss_pred cC----CeeEEEEeccC-CCcceeEEEEEEcCCCcc
Q psy12425 440 SE----RHAILTIRDAS-NVDTAPYRVVAENDLGMD 470 (591)
Q Consensus 440 ~~----~~~~l~i~~~~-~~~~g~y~c~a~n~~g~~ 470 (591)
.. -.+.|.|..+. .++.+.|+|.|.|..+..
T Consensus 532 ~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 532 ETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp TTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred CCceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 11 13679999988 556899999999997654
No 387
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.57 E-value=1.9e-14 Score=107.43 Aligned_cols=93 Identities=28% Similarity=0.432 Sum_probs=70.9
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeC-CCCceEEece-------------eeeeEEEEcCcc
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREH-PMSSWIRVGN-------------TRFTTMAITGLS 545 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~-~~~~~~~~~~-------------~~~~~~~i~~l~ 545 (591)
.+|++|. +..++.+++.|+|.+|.++| .+|++|.|+++.. ....|..... ...+.+++.+|.
T Consensus 4 ~pP~~P~---v~~~~~~sv~L~W~~P~~~G-~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~ 79 (115)
T 2ic2_A 4 YPPTPPN---VTRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLK 79 (115)
T ss_dssp CCCCCCE---EEECC---EEEEEEEECCSS-CCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCC
T ss_pred CCCCcCE---eEEEeCCEEEEEEcCCCCCC-CCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCC
Confidence 4566665 77889999999999887555 7999999999987 4577876532 345689999999
Q ss_pred cCceEEEEEEEEcCCcCCCCCCCcceEEecc
Q psy12425 546 PGHQYEFRVYAENVYGRSDPSTTSDLITTYG 576 (591)
Q Consensus 546 ~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~~ 576 (591)
|++.|.|||+|.|.+|.|.+|..+..+.+..
T Consensus 80 p~t~Y~FRV~A~N~~G~~~pS~~S~~~~~~~ 110 (115)
T 2ic2_A 80 PQHTYRFRILAVYSNNDNKESNTSAKFYLQP 110 (115)
T ss_dssp SSEEEEEEEEEEETTSCEEECCCCCCEEECC
T ss_pred CCCEEEEEEEEEeCCCCCCCCCCCCCEEeCC
Confidence 9999999999999999988888777666553
No 388
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.57 E-value=5.2e-14 Score=115.95 Aligned_cols=147 Identities=14% Similarity=0.039 Sum_probs=102.0
Q ss_pred CceeeeecCCeEEEEEEeccCCCce-EEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPME-VSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.+.|.+. +.|+|+|..+... ...|.|.+++.+|+|.|+|.+.|..+ +..
T Consensus 14 p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~----------~~~L~i~~~~~~d~G~Y~C~~~n~~~--s~~ 81 (175)
T 1fnl_A 14 PQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ----------ASSYFIDAATVNDSGEYRCQTNLSTL--SDP 81 (175)
T ss_dssp SCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS----------CSEEEESSCCGGGCEEEEEECSSSCC--CCC
T ss_pred CCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC----------ceEEEEeCCCcccCEEEEEEeeCCcc--ccc
Confidence 4567899999999999999987766 8999999987642 33899999999999999999998654 445
Q ss_pred EEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEE
Q psy12425 81 FTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 160 (591)
Q Consensus 81 ~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 160 (591)
+.|.|...+.....+ ......+..+.|.|.... +.+...+.+.+ .+. .+........+.|.++...+.+.
T Consensus 82 ~~l~V~~~~~~~~~~-~~~~~~g~~~~l~C~~~~---~~~~~~~~W~k--~g~----~~~~~~~~~~L~i~~v~~~d~G~ 151 (175)
T 1fnl_A 82 VQLEVHIGWLLLQAP-RWVFKEEDPIHLRCHSWK---NTALHKVTYLQ--NGK----DRKYFHHNSDFHIPKATLKDSGS 151 (175)
T ss_dssp EEEEEECSSEEEECS-CSEEETTCCEEEEEEECT---TCCCEEEEEEE--TTE----EEEEEEECCCEEESSCCGGGCEE
T ss_pred EEEEEeCCCceeeCC-CceecCCCCEEEEEEcCC---CCCceEEEEEE--CCe----EccCCCCCCEEEEcccChhhCeE
Confidence 666666432211111 233456788999997533 11222233322 111 11122346789999999999999
Q ss_pred EEEEEEccCC
Q psy12425 161 FHVMAVNENG 170 (591)
Q Consensus 161 ~~~~a~n~~g 170 (591)
|+|.|.|..|
T Consensus 152 Y~C~a~n~~~ 161 (175)
T 1fnl_A 152 YFCRGLVGSK 161 (175)
T ss_dssp EEEEEEETTE
T ss_pred EEEEEEcCCC
Confidence 9999998654
No 389
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.57 E-value=5.3e-14 Score=119.94 Aligned_cols=173 Identities=11% Similarity=0.020 Sum_probs=108.6
Q ss_pred EeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCc--eeeecCcccCCcEEEEEEEEcCCCCCCCC
Q psy12425 199 TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPS--QINIPNLIEGRQYEFRVYAQNEAGLSLPS 276 (591)
Q Consensus 199 ~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~l~~~~~~~y~c~a~n~~g~~~~s 276 (591)
....|..++|.|.... ....+.+|. +........ ... ....... .|.|.++...|.|.|+|.|.|..|....+
T Consensus 19 ~v~~G~~vtL~C~~~~--~~~~~~W~k-~g~~~~~~~-~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s 93 (218)
T 1uct_A 19 VIPLDGSVKIQCQAIR--EAYLTQLMI-IKNSTYREI-GRR-LKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYS 93 (218)
T ss_dssp EEETTCCEEEEECCCT--TCSEEEEEE-EETTEEEEC-SEE-CC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEEC
T ss_pred ccCCCCCEEEEEEcCC--CCCEEEEEE-CCCcccccc-ccc-CCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeec
Confidence 4567899999998753 111222221 111000000 000 0011234 89999999999999999999976533222
Q ss_pred CCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEccee
Q psy12425 277 SASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVY 356 (591)
Q Consensus 277 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 356 (591)
....+.+.. ...+|.+...+ ...+.+|+.+.|.|.+.+.+.+.+.|++++..+... .........|.|.+++
T Consensus 94 -~~~~l~V~~--~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~----~~~~~~~~~L~I~~v~ 165 (218)
T 1uct_A 94 -DTLELVVTG--LYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ----HQSGEHPANFSLGPVD 165 (218)
T ss_dssp -CCEEEEEEC--SSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS----EEECSSSEEEECCSCC
T ss_pred -CCEEEEEcC--cccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc----ccCCCccCEEEEccCC
Confidence 334444442 12456665544 456789999999998778888899999998876541 1123345689999999
Q ss_pred cccceEEEEEEEeCCcc-----eeeeeEEEEec
Q psy12425 357 GVDADEYVCRAVNKGGV-----KSTKAELIIMT 384 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~g~-----~~~~~~l~v~~ 384 (591)
.+|+|.|+|.|.|.... .+....|.|..
T Consensus 166 ~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 166 LNVSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp GGGCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred cccCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 99999999999986421 23445565554
No 390
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.57 E-value=3.2e-14 Score=113.78 Aligned_cols=92 Identities=18% Similarity=0.193 Sum_probs=78.9
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeC-CeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLD-DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|++..+....++.+.... ....|.|.+++..|+|.|+|.|.|..|.....
T Consensus 48 ~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 127 (154)
T 1fhg_A 48 ILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCT 127 (154)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEE
Confidence 56789999999999999999999999999999999888887776543 35799999999999999999999999999999
Q ss_pred EEEEEecCCCCCC
Q psy12425 81 FTINITGLPGPPI 93 (591)
Q Consensus 81 ~~l~v~~~p~~p~ 93 (591)
+.|.|...|....
T Consensus 128 ~~l~V~~~p~~~~ 140 (154)
T 1fhg_A 128 AELLVETMGKEGE 140 (154)
T ss_dssp EEEEEECC-----
T ss_pred EEEEEeCcCcCCC
Confidence 9999998776544
No 391
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.57 E-value=5.6e-14 Score=116.70 Aligned_cols=151 Identities=14% Similarity=0.094 Sum_probs=103.8
Q ss_pred EeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCC
Q psy12425 199 TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSA 278 (591)
Q Consensus 199 ~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~ 278 (591)
....|+.++|.|.... + ...+.+ ...+.. .......|.|.++...|.|.|+|.|.|..|....+ .
T Consensus 18 ~v~~G~~v~L~C~~~~-~-~~~~~W-----~k~g~~-------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s-~ 82 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPP-G-VDLYRL-----EKLSSS-------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPS-D 82 (184)
T ss_dssp EEETTCCEEEEEECST-T-CSEEEE-----EETTTC-------CEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCC-C
T ss_pred cccCCCcEEEEEeCCC-C-CCEEEE-----EECCcc-------ccCcccEEEECcCChhhCceEEEEEEcCCCccCCC-C
Confidence 4567889999999743 1 111221 122221 12356789999999999999999999977643222 3
Q ss_pred cceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecc
Q psy12425 279 SNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGV 358 (591)
Q Consensus 279 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 358 (591)
...+.+.. ...+|.+...+ ...+.+|+.+.|.|.+.+.+ +.+.|++++..+....... .....|.|.++..+
T Consensus 83 ~~~l~V~~--~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~~----~~~~~L~i~~v~~~ 154 (184)
T 2gi7_A 83 QLELVATG--VFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPER----WYRASFPIITVTAA 154 (184)
T ss_dssp CEEEEEES--SSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCCE----EEEESSSEEEETTC
T ss_pred CEEEEecC--cCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecCC----CceEEEEEccCCcc
Confidence 34444432 12456666555 45678999999999987765 5999999988775422211 12236899999999
Q ss_pred cceEEEEEEEeCCc
Q psy12425 359 DADEYVCRAVNKGG 372 (591)
Q Consensus 359 d~g~y~c~a~n~~g 372 (591)
|+|.|+|.|.|..+
T Consensus 155 D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 155 HSGTYRCYSFSSRD 168 (184)
T ss_dssp CSEEEEEEEECTTS
T ss_pred CCeEEEEEEEeCCC
Confidence 99999999999765
No 392
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.57 E-value=2.6e-14 Score=105.03 Aligned_cols=83 Identities=16% Similarity=0.214 Sum_probs=70.4
Q ss_pred ecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEE--EeC---CeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEE
Q psy12425 8 PEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFT--VLD---DYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFT 82 (591)
Q Consensus 8 ~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~---~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~ 82 (591)
..|+.+.|.|.+.|.|.|.++|+|+|+.+..+.+.... ..+ ...+|.|.+++.+|+|.|+|.|.|..|..+.++.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 45888999999999999999999999999877654332 211 1246999999999999999999999999999999
Q ss_pred EEEecCCC
Q psy12425 83 INITGLPG 90 (591)
Q Consensus 83 l~v~~~p~ 90 (591)
|.|...|.
T Consensus 94 l~V~~~P~ 101 (103)
T 1wwb_X 94 AHFMGWPG 101 (103)
T ss_dssp ECCSCCCC
T ss_pred EEECCCCC
Confidence 99988775
No 393
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.57 E-value=4.1e-13 Score=118.01 Aligned_cols=134 Identities=14% Similarity=0.125 Sum_probs=97.0
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCC--CCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCC-
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLS--LPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKP- 322 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~--~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~- 322 (591)
...|.|.+++..|.|.|.|.+.|..|.. ........+.+. .+|.+...+....+.+|+.+.|.|.+.+.|.+
T Consensus 78 ~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~-----~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 152 (256)
T 1nqb_A 78 TAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS-----SDIELTQTPLSLPVSLGDQASISCRSSQSIVHS 152 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC-----CCCCEEEECSEEEECTTCCEEEEEEESSCCBCT
T ss_pred EEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeec-----ccccEEecCcEEEEecCCcEEEEeEecCccccc
Confidence 3589999999999999999999986631 111123445554 34566666667778999999999999998875
Q ss_pred ----eeEEec--CCccCC------------CCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eeeeEEEEe
Q psy12425 323 ----TISWLK--GSREIT------------PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKAELIIM 383 (591)
Q Consensus 323 ----~v~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~~l~v~ 383 (591)
.+.|++ ++..+. ...++.....+...+|.|.+++.+|+|.|+|.|.|..+.. .....|.|.
T Consensus 153 ~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 153 NGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp TSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred ccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEE
Confidence 999999 454331 1345555556667799999999999999999999854432 334556664
Q ss_pred c
Q psy12425 384 T 384 (591)
Q Consensus 384 ~ 384 (591)
.
T Consensus 233 ~ 233 (256)
T 1nqb_A 233 R 233 (256)
T ss_dssp C
T ss_pred C
Confidence 3
No 394
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=1.6e-14 Score=105.30 Aligned_cols=93 Identities=18% Similarity=0.332 Sum_probs=83.6
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+.+..+.+|+.+.|.|.+ .|.+.+.|++++..+..+.++.+..++..++|.|.++..+|+|.|+|.|.|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 56788888888999999999999999 8889999999999999889999988888889999999999999999999997
Q ss_pred CcceeeeeEEEEecCCc
Q psy12425 371 GGVKSTKAELIIMTAPK 387 (591)
Q Consensus 371 ~g~~~~~~~l~v~~~p~ 387 (591)
..+.++.|.|..+|.
T Consensus 84 --~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 84 --NVTLPAKVHVISGPS 98 (100)
T ss_dssp --CCCEEEEEEEECCSC
T ss_pred --CeeEEEEEEEeCCCC
Confidence 556778888887764
No 395
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.56 E-value=1e-13 Score=130.03 Aligned_cols=258 Identities=16% Similarity=0.137 Sum_probs=171.0
Q ss_pred CCceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCC--CceEEEEEEEcCCeeeE
Q psy12425 1 MPNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKE--DAGDYTVNLSNSSGSVS 78 (591)
Q Consensus 1 ~p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~--d~g~Y~c~~~n~~g~~~ 78 (591)
+|.+..|.+|.++++.|.+... -.... +................++|.++... ....|.|.... ..
T Consensus 204 fP~~~vv~~GS~vt~~Ci~~~~---~~~~~-----l~~~~~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~~----~~ 271 (483)
T 3e0g_A 204 FPQDKVILVGSDITFCCVSQEK---VLSAL-----IGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTTED----NI 271 (483)
T ss_dssp ESCSEEEETTCCEEEEECCSSC---EEEEE-----SSSCCBCCEECSSSCEEEEECSCCCCCSSCEEEEEEESS----CE
T ss_pred eccCCEEeCCCCEEEEEEeCcc---cccee-----cCcccceeEEecCCEEEEEEeCCCCccCccceEEEecCC----cc
Confidence 4888899999999999998632 12222 22222222233455678888888763 23469998521 34
Q ss_pred EEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCC--CcceeeEEEEEEecCCCceEEEEe----ecCcceEEEcC
Q psy12425 79 GTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDG--GLKVTHYVVERRDISMPHWICIST----TCHDTTFIVQG 152 (591)
Q Consensus 79 ~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~--~~~~~~y~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ 152 (591)
..+.+.+..+|++|.+ +........+++++|.++...+ |...+.|.+.++..+. ...+.. ......+.+..
T Consensus 272 ~g~~l~vg~PP~~P~n-lsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~--~~~C~~~~~~~~~~~~C~~~~ 348 (483)
T 3e0g_A 272 FGTVIFAGYPPDTPQQ-LNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGK--YVRLKRAEAPTNESYQLLFQM 348 (483)
T ss_dssp EEEEEEEECCCCCCEE-EEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCC--EEEECCCSSCSCSCEEEEEEC
T ss_pred cceEEECcCCCCCCCc-cEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCC--CccccCCcccCCCEEEEEEcc
Confidence 5567888888888776 4555555678999999877443 3457889998864322 222221 11345688889
Q ss_pred CcCCcEEEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecC
Q psy12425 153 LTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVG 232 (591)
Q Consensus 153 l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~ 232 (591)
+.+...|.|+|.|.|..|..... . .+.. .....|.+|..+.+.......+.|+|..|... +.....|.+.++..+
T Consensus 349 l~~~t~Y~f~V~A~N~lG~~~S~-~--~~~~-~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~-~~~~L~YeVrYr~~~ 423 (483)
T 3e0g_A 349 LPNQEIYNFTLNAHNPLGRSQST-I--LVNI-TEKVYPHTPTSFKVKDINSTAVKLSWHLPGNF-AKINFLCEIEIKKSN 423 (483)
T ss_dssp CTTCCCEEEEEEEECSSCEEEEE-E--EECG-GGGBCCCCCEEEEECCSSSSSCCEEEECCSCC-TTSBCCCEEEEECSS
T ss_pred CCCCcEEEEEEEEEeCCCCcccc-e--EEEe-ccccCCCCCeeeEEEEecCCeEEEEECCCCCC-CCceEEEEEEEEECC
Confidence 99999999999999999876532 1 1111 12346777877777766778899999998543 335678999999876
Q ss_pred CCc-cEEEEeee--cCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCc
Q psy12425 233 SDA-WQRVNVAI--CAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSAS 279 (591)
Q Consensus 233 ~~~-~~~~~~~~--~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~ 279 (591)
... |....... .....+.+.+|.++..|.++++|. ..|.+.++..+
T Consensus 424 ~~~~~~~vsv~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS 472 (483)
T 3e0g_A 424 SVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWS 472 (483)
T ss_dssp SCCCEEECCCBCCSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCC
T ss_pred CCCceEEEEEeccCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCC
Confidence 543 54322211 122357899999999999999999 56664444443
No 396
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.56 E-value=1.9e-13 Score=120.52 Aligned_cols=141 Identities=15% Similarity=0.160 Sum_probs=96.6
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCC------CCCCcceEEEcCCCc----------cCCCeEEeeccccceecccc
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSL------PSSASNSVQIKDPMA----------AKAPEIIVPLRNANAIQNHN 309 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~------~s~~~~~~~~~~~~~----------~~~p~~~~~~~~~~~~~g~~ 309 (591)
...|.|.+++..|.|.|.|.|.|..|... .......+.+..... ..++.+...+....+.+|+.
T Consensus 77 ~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~ 156 (257)
T 1f3r_B 77 QVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDR 156 (257)
T ss_dssp EEEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCC
T ss_pred EEEEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCC
Confidence 35899999999999999999999865210 011233455543210 01233444455667889999
Q ss_pred EEEEEEEcCCCCCeeEEec--CCccCC------------CCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCccee
Q psy12425 310 AQFQCTITGCPKPTISWLK--GSREIT------------PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 375 (591)
Q Consensus 310 ~~l~c~~~~~p~~~v~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~ 375 (591)
+.|.|.+.+.+.+.+.|++ ++..+. ...++.+...+...+|.|.++..+|+|.|+|.|.|......
T Consensus 157 v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g 236 (257)
T 1f3r_B 157 VTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFG 236 (257)
T ss_dssp EEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEEC
T ss_pred EEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeEC
Confidence 9999999999989999999 444331 13455555556677999999999999999999999752223
Q ss_pred eeeEEEEecCC
Q psy12425 376 TKAELIIMTAP 386 (591)
Q Consensus 376 ~~~~l~v~~~p 386 (591)
....|.|...+
T Consensus 237 ~gt~l~V~~~~ 247 (257)
T 1f3r_B 237 AGTKLELKAAE 247 (257)
T ss_dssp CCCEECCSSSC
T ss_pred CCEEEEEeCCC
Confidence 34455554433
No 397
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.56 E-value=3.4e-13 Score=127.64 Aligned_cols=135 Identities=17% Similarity=0.100 Sum_probs=91.0
Q ss_pred eeEEEEeccCCCcceeEEEEEEcC--CCcc--ceEEEEEec-C-CCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeE
Q psy12425 443 HAILTIRDASNVDTAPYRVVAEND--LGMD--SAIVKIQIS-D-RPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNY 516 (591)
Q Consensus 443 ~~~l~i~~~~~~~~g~y~c~a~n~--~g~~--~~~~~~~v~-~-~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y 516 (591)
...+.|.+|.+...|.+++.|.|. .|.+ +....+... + ++.+|.++.+...+ .++.|+|++|. ...+|
T Consensus 162 ~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~~-~~~~l~W~pp~-----~~~~Y 235 (414)
T 3se4_A 162 YSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN-QNYVLKWDYTY-----ANMTF 235 (414)
T ss_dssp CSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEECSS-----SSCEE
T ss_pred CcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEec-CCeEEEECCCC-----CCeEE
Confidence 456889999999999999999994 4443 333333332 2 33567777777654 67999999863 23499
Q ss_pred EEEeeeC--------CCCceEEe---ceeeeeEEEEc-CcccCceEEEEEEEEcCCcCCCCCCCcceEEeccccccCCCC
Q psy12425 517 IVEKREH--------PMSSWIRV---GNTRFTTMAIT-GLSPGHQYEFRVYAENVYGRSDPSTTSDLITTYGELLSGMEA 584 (591)
Q Consensus 517 ~v~~~~~--------~~~~~~~~---~~~~~~~~~i~-~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~~~~p~~~~~ 584 (591)
.|+|+.. ....|..+ .+.....+.+. +|.+++.|.|+|+|.|..|.|++|.... +.+....+++||.
T Consensus 236 ~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~-~~t~~~~~~~pP~ 314 (414)
T 3se4_A 236 QVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIK-FDTEIQAFLLPPV 314 (414)
T ss_dssp EEEEEESGGGSCCCC--CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEE-EETTCC-------
T ss_pred EEEEEehhccccccccccCceECCCccCCCCCEEcCCcccccCccEEEEEEEecCCCccccccccc-ccchhccccCCCe
Confidence 9999863 24567654 23444566675 6999999999999999999999987654 4566556666654
No 398
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=1.6e-14 Score=110.18 Aligned_cols=101 Identities=21% Similarity=0.217 Sum_probs=82.6
Q ss_pred ecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEe--ceeeeeEEEEcCcccCceEEEEEE
Q psy12425 478 ISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV--GNTRFTTMAITGLSPGHQYEFRVY 555 (591)
Q Consensus 478 v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~~l~~~~~Y~~~v~ 555 (591)
...+|.+|.++.+...+.+++.|+|++|.. ++..+.+|.|+|+......|... .......+.|.+|.+++.|.|+|+
T Consensus 14 ~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~-~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 92 (119)
T 2ed7_A 14 SSVLPSAPRDVVPVLVSSRFVRLSWRPPAE-AKGNIQTFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVV 92 (119)
T ss_dssp SSSSCCCCSCCEEEEECSSCEEEECCCCSC-CSSCEEEEEEEEEESSCCCCEEEECCCTTCCEEEECSCCSSSEEEECCE
T ss_pred CCCCCcCCcceEEEecCCCEEEEEEeCCCC-CCCcEEEEEEEEEeCCCCcceeeEeecCCceEEEeCCCCCCCEEEEEEE
Confidence 346789999999999999999999998864 45589999999998776666544 234567999999999999999999
Q ss_pred EEcCCcCCCCCCCcceEEeccccc
Q psy12425 556 AENVYGRSDPSTTSDLITTYGELL 579 (591)
Q Consensus 556 A~n~~G~~~~s~~~~~~~t~~~~p 579 (591)
|.|..|.|.+|....+.|.+..+|
T Consensus 93 A~n~~G~g~~S~~~~~~T~~~~pP 116 (119)
T 2ed7_A 93 AYNEWGPGESSQPIKVATQPESGP 116 (119)
T ss_dssp EEESSCBCSCCCCEEEECCCCSCC
T ss_pred EEcCCccCCCcCCEEEEeCCCCCC
Confidence 999999999999876655444443
No 399
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=3.4e-14 Score=107.95 Aligned_cols=99 Identities=24% Similarity=0.554 Sum_probs=83.7
Q ss_pred cCCcccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEE
Q psy12425 384 TAPKFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVA 463 (591)
Q Consensus 384 ~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a 463 (591)
.+|.+..+........+..|+.+.|.|.+.|.|.|.+.|++++..+. ..++.+...+....|.|.++...|+|.|+|.|
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 98 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSV 98 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEE
Confidence 45555544334456778899999999999999999999999999886 45666666677888999999999999999999
Q ss_pred EcCCCccceEEEEEecCCCC
Q psy12425 464 ENDLGMDSAIVKIQISDRPD 483 (591)
Q Consensus 464 ~n~~g~~~~~~~~~v~~~p~ 483 (591)
.|..|..+..+.|.|.++|+
T Consensus 99 ~N~~G~~~~~~~l~V~~~P~ 118 (118)
T 2e7c_A 99 QIENMKDTATIRIRVVEKAG 118 (118)
T ss_dssp ECSSCEECCEEEEEEECCCC
T ss_pred EeCCCeEEEEEEEEEEcCCC
Confidence 99999999999999988763
No 400
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.56 E-value=4.5e-14 Score=104.45 Aligned_cols=95 Identities=22% Similarity=0.308 Sum_probs=86.5
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+...+...+|.|.++..+|+|.|+|.|.|.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 86 (103)
T 3qp3_A 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNY 86 (103)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeC
Confidence 46788888888889999999999999999999999999999998888888888888889999999999999999999999
Q ss_pred CcceeeeeEEEEecC
Q psy12425 371 GGVKSTKAELIIMTA 385 (591)
Q Consensus 371 ~g~~~~~~~l~v~~~ 385 (591)
.|.....+.|.|...
T Consensus 87 ~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 87 KGEASDYATLDVTGG 101 (103)
T ss_dssp TEEEEEEEEEEEECC
T ss_pred CCcEEEEEEEEEECC
Confidence 999988888888653
No 401
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2.3e-14 Score=106.84 Aligned_cols=98 Identities=21% Similarity=0.186 Sum_probs=78.4
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCC---CCceEEeceeeeeEEEEcCcccCceEEEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHP---MSSWIRVGNTRFTTMAITGLSPGHQYEFRVYA 556 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~---~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A 556 (591)
.+|.+|.++.+..++.+++.|+|++|...+ +.|.+|+|+|+... ...|... ......+.|.+|.|++.|.|+|+|
T Consensus 6 ~~P~~p~~l~~~~~~~~sv~l~W~~p~~~~-g~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A 83 (109)
T 2e7h_A 6 SGPPAVSDIRVTRSSPSSLSLAWAVPRAPS-GAVLDYEVKYHEKGAEGPSSVRFL-KTSENRAELRGLKRGASYLVQVRA 83 (109)
T ss_dssp CSSCCCCCCEEEEEETTEEEEECCCCCCSS-SCCCEEEEEEEETTCCSTTTSEEE-EESSSEEEEESCCTTSCEEEEEEE
T ss_pred CCCCCCCccEEEecCCCEEEEEeCCCCCCC-CcEeEEEEEEEECCCCCCceeEEE-ccCCCEEEECCCCCCCeEEEEEEE
Confidence 578889999999999999999999987444 47999999998765 2333333 344569999999999999999999
Q ss_pred EcCCcCCCCCCCcceEEeccccc
Q psy12425 557 ENVYGRSDPSTTSDLITTYGELL 579 (591)
Q Consensus 557 ~n~~G~~~~s~~~~~~~t~~~~p 579 (591)
.|.+|.|++|..+.+.|.+...|
T Consensus 84 ~n~~G~g~~S~~~~~~T~~~~~p 106 (109)
T 2e7h_A 84 RSEAGYGPFGQEHHSQTQLDSGP 106 (109)
T ss_dssp ECSSCBCCCCSCEECCCCCCSSC
T ss_pred EeCCccCCCCCCEEEEcCCCCCC
Confidence 99999999999876545444333
No 402
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.56 E-value=7.2e-14 Score=117.82 Aligned_cols=162 Identities=17% Similarity=0.189 Sum_probs=101.6
Q ss_pred EeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCc-cE-EEEeeecCCceeeecCcccCCcEEEEEEEEcCC-CCCCC
Q psy12425 199 TQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDA-WQ-RVNVAICAPSQINIPNLIEGRQYEFRVYAQNEA-GLSLP 275 (591)
Q Consensus 199 ~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~-~~-~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~-g~~~~ 275 (591)
....|+.++|.|.....+. .+.+| ..+... .. ...........|.|.++...|.|.|+|.|.|.. |....
T Consensus 15 ~v~~G~~v~L~C~~~~~~~--~~~W~-----k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~ 87 (198)
T 1ugn_A 15 VITQGSPVTLRCQGGQETQ--EYRLY-----REKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSES 87 (198)
T ss_dssp EEETTCCEEEEEECCTTCC--CEEEE-----ESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCC
T ss_pred cccCCCcEEEEEEecCCCc--EEEEE-----ECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccC
Confidence 4457889999999753322 22222 112111 00 000012345789999999999999999999977 53322
Q ss_pred CCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCc-eEEEE-eCCeEEEEEc
Q psy12425 276 SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSAR-HHIFA-EGDTYTLIIN 353 (591)
Q Consensus 276 s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~-~~~~~~l~i~ 353 (591)
+ ....+.+.. ...+|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|++++..+..... +.... .+....|.|.
T Consensus 88 s-~~~~l~V~~--~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~ 162 (198)
T 1ugn_A 88 S-DPLELVVTG--AYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVG 162 (198)
T ss_dssp C-CCEEEEEEC--SSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEEC
T ss_pred C-ccEEEEEcc--cccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEec
Confidence 2 334455542 12346655443 3568899999999999998 789999999887643321 11122 2235689999
Q ss_pred ceecccceEEEEEEEeCCc
Q psy12425 354 SVYGVDADEYVCRAVNKGG 372 (591)
Q Consensus 354 ~~~~~d~g~y~c~a~n~~g 372 (591)
++..+|+|.|+|.|.|..+
T Consensus 163 ~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 163 PVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp CCCTTSCEEEEEEEECTTS
T ss_pred ccCcccCeEEEEEEEeCCC
Confidence 9999999999999999866
No 403
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.55 E-value=2.4e-14 Score=125.86 Aligned_cols=170 Identities=14% Similarity=0.202 Sum_probs=109.5
Q ss_pred ccccceeccccEEEEEEEcCCCCCeeEEecCCc--cC------CC---------CC-ceEEEEeCCeEEEEEcceecccc
Q psy12425 299 LRNANAIQNHNAQFQCTITGCPKPTISWLKGSR--EI------TP---------SA-RHHIFAEGDTYTLIINSVYGVDA 360 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~--~~------~~---------~~-~~~~~~~~~~~~l~i~~~~~~d~ 360 (591)
+..+.+.+|+.+.|.|.+.+.+.+.+.|++... .. .. .. ++.+..++... |.|.+++.+|+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~Ds 86 (253)
T 3to4_D 8 PRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQG 86 (253)
T ss_dssp CSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSSC
T ss_pred CCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhhC
Confidence 345668899999999999988899999987321 10 00 01 33343333333 99999999999
Q ss_pred eEEEEEEEeCCc------ceeeeeEEEEecCCcccCCCCcc----cceeecCCCeEEEEEeeec-cCCC-eEEEeeCCeE
Q psy12425 361 DEYVCRAVNKGG------VKSTKAELIIMTAPKFNVPPRFR----DTAYFDKGENVVVKIPFTG-YPKP-KITWYRDNEV 428 (591)
Q Consensus 361 g~y~c~a~n~~g------~~~~~~~l~v~~~p~~~~~~~~~----~~~~~~~g~~~~l~c~~~~-~p~~-~v~W~~~~~~ 428 (591)
|.|.|.+.+..+ .......+.|........+|... ....+..|..+.|.|.+.| .|.+ .+.|+++|..
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~ 166 (253)
T 3to4_D 87 RTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 166 (253)
T ss_dssp EEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred eEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEE
Confidence 999999987654 12334566676432222222211 1112234689999999998 5666 8999999998
Q ss_pred eeeccceEEEe-------cCC----eeEEEEeccCCCc-ceeEEEEEEcCCCc
Q psy12425 429 IESGGHFHVET-------SER----HAILTIRDASNVD-TAPYRVVAENDLGM 469 (591)
Q Consensus 429 ~~~~~~~~~~~-------~~~----~~~l~i~~~~~~~-~g~y~c~a~n~~g~ 469 (591)
+.......... .+. .+.|.|.....+| .+.|+|.|.|..-.
T Consensus 167 l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l~ 219 (253)
T 3to4_D 167 VHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (253)
T ss_dssp ECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCCC
Confidence 85432211100 111 2467777777666 77999999997543
No 404
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.55 E-value=1.1e-14 Score=109.04 Aligned_cols=89 Identities=20% Similarity=0.260 Sum_probs=66.9
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|++..+....++.+. ....+|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 17 ~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 94 (108)
T 3kvq_A 17 LENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEA 94 (108)
T ss_dssp CCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEE--TTTTEEEECSCCGGGCEEEEEEEC----CEEEEE
T ss_pred CCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEe--CCCcEEEEeecCcccCEEEEEEEEeCCCceEEEE
Confidence 56788999999999999999999999999999988776665443 3345899999999999999999999999999999
Q ss_pred EEEEecCCCCC
Q psy12425 82 TINITGLPGPP 92 (591)
Q Consensus 82 ~l~v~~~p~~p 92 (591)
.|.|...|..+
T Consensus 95 ~l~V~~~~~~~ 105 (108)
T 3kvq_A 95 FFIIEGAQEKT 105 (108)
T ss_dssp EEEEEC-----
T ss_pred EEEEeCCCccc
Confidence 99999877654
No 405
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.55 E-value=1.9e-14 Score=119.63 Aligned_cols=143 Identities=10% Similarity=0.076 Sum_probs=99.4
Q ss_pred eeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcc-cCCCCceEEEEEEEcCCeeeEEEEEEE
Q psy12425 6 YIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKE-IRKEDAGDYTVNLSNSSGSVSGTFTIN 84 (591)
Q Consensus 6 ~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~Y~c~~~n~~g~~~~~~~l~ 84 (591)
.+.+|+++.|.|.+.+ +. .|.|+|||..+.... ..+|.|.+ ++.+|+|.|+|.|.|..|.....+.+.
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~---------~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKH---------DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSCC---------CSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCC---------CCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 4578999999999987 43 499999999987641 12799999 999999999999999998866666666
Q ss_pred EecCCCCCCC----------------C------cce---EEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEE
Q psy12425 85 ITGLPGPPIG----------------P------LDV---SEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICI 139 (591)
Q Consensus 85 v~~~p~~p~~----------------~------~~~---~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~ 139 (591)
|...+.+... + ... ....+..+.|.|..|. ..+.||.-. ....
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~p~----p~i~W~k~g-~~i~------- 146 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLTD----KTIKWLKDG-SIIS------- 146 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSSSC----SCEEEEETT-EECC-------
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeCCC----CeEEEEECC-EECc-------
Confidence 5543322110 0 001 1126788999998743 233333211 1111
Q ss_pred EeecCcceEEEcCCcCCcEEEEEEEEEccCCC
Q psy12425 140 STTCHDTTFIVQGLTEGQEYLFHVMAVNENGM 171 (591)
Q Consensus 140 ~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~ 171 (591)
........+.|.++...+.+.|+|.|.|..|.
T Consensus 147 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 178 (186)
T 1jbj_A 147 PLNATKNTWNLGNNAKDPRGTYQCQGAKETSN 178 (186)
T ss_dssp CSSCCSSCCEEEETTSCCEEEEEEEESSCEEE
T ss_pred ccCCCcceEEECCCCcCcCEEEEEEEEcCcCC
Confidence 01125677899999999999999999998774
No 406
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=9.5e-15 Score=106.82 Aligned_cols=86 Identities=17% Similarity=0.263 Sum_probs=73.8
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.|.| +.+.|+|++..+....++.+. ...|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 84 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT----GEEVEVQDSVPADSGLYACVTSSPSGSDTTYF 84 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC----SSEEEETTCCTTTCEEEEEEEEETTEEEEEEE
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE----CCEEEEccCCHHHCEEEEEEEEeCCceEEEEE
Confidence 5678899999999999999877 799999999988776665543 23899999999999999999999999988888
Q ss_pred EEEEecCCCCC
Q psy12425 82 TINITGLPGPP 92 (591)
Q Consensus 82 ~l~v~~~p~~p 92 (591)
.|.|...|..+
T Consensus 85 ~l~V~~~~~s~ 95 (99)
T 2cr3_A 85 SVNVSDALPSG 95 (99)
T ss_dssp EECBCSCCSCC
T ss_pred EEEEecCCCCc
Confidence 88888766543
No 407
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=1.7e-14 Score=106.05 Aligned_cols=85 Identities=24% Similarity=0.267 Sum_probs=72.3
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecC-CceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD-DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|++..+... .++.+ ..+ .+|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 15 p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~--~~~-~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 91 (100)
T 2edj_A 15 PANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATI--QEQ-GTLQIKNLRISDTGTYTCVATSSSGETSWS 91 (100)
T ss_dssp CCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEE--CTT-CCEEEESCCTTTCCEEEEEEECSSCCCBCC
T ss_pred cCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEE--cCC-CEEEEccCCcccCEEEEEEEEcCCCCEEEE
Confidence 66788999999999999999999999999999988743 33332 222 379999999999999999999999999888
Q ss_pred EEEEEecCC
Q psy12425 81 FTINITGLP 89 (591)
Q Consensus 81 ~~l~v~~~p 89 (591)
+.|.|.+.|
T Consensus 92 ~~l~V~~~~ 100 (100)
T 2edj_A 92 AVLDVTESG 100 (100)
T ss_dssp EEEEEESCC
T ss_pred EEEEEecCC
Confidence 999998754
No 408
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.5e-14 Score=107.64 Aligned_cols=93 Identities=26% Similarity=0.223 Sum_probs=74.1
Q ss_pred CCCCC-CCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCC
Q psy12425 482 PDPPQ-FPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVY 560 (591)
Q Consensus 482 p~~p~-~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~ 560 (591)
|.+|. .+.+..++.+++.|+|++|..++ ..+.+|+|+++......|..+.....+.++|.+|.+++.|.|||+|.|..
T Consensus 10 P~~P~~~~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 88 (110)
T 2db8_A 10 PATPILQLEECCTHNNSATLSWKQPPLST-VPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKT 88 (110)
T ss_dssp CCCCBCCCCCCSCSSSEEEECCBCCTTCC-SCCSEEEEEECCSSSSCCEEEEEESCSCEEEECCCSSSCCEEEEEEECSS
T ss_pred CCCccccceeeccCCCEEEEEECCCCCCC-CCccEEEEEEEeCCCCceEEEEeCCcCEEEECCCCCCCEEEEEEEEEeCC
Confidence 44443 33344467899999999887544 68999999998877678887766667899999999999999999999999
Q ss_pred cCCCCCCCcceEEec
Q psy12425 561 GRSDPSTTSDLITTY 575 (591)
Q Consensus 561 G~~~~s~~~~~~~t~ 575 (591)
|.|++|..+.+.|.+
T Consensus 89 G~s~~S~~~~~~T~~ 103 (110)
T 2db8_A 89 GVSPYSKTLVLQTSE 103 (110)
T ss_dssp CBCCCCSCEECCCCC
T ss_pred cCCCCCCCEEEEcCC
Confidence 999999886553433
No 409
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.55 E-value=1.4e-14 Score=105.10 Aligned_cols=79 Identities=20% Similarity=0.312 Sum_probs=69.6
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.|.| +.+.|+|+|..+..+.++.+. ...|.|.+++.+|+|.|+|.|.|..|..+..+
T Consensus 16 ~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 90 (95)
T 2ckn_A 16 VESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT----GEEVEVRDSIPADSGLYACVTSSPSGSDTTYF 90 (95)
T ss_dssp BCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC----SSEEEESSCCGGGSEEEEEEEEETTEEEEEEE
T ss_pred cceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe----CCEEEECCCChHHCEEEEEEeccCCCcEEEEE
Confidence 5678899999999999999987 799999999998877665543 33899999999999999999999999988888
Q ss_pred EEEE
Q psy12425 82 TINI 85 (591)
Q Consensus 82 ~l~v 85 (591)
.|.|
T Consensus 91 ~l~V 94 (95)
T 2ckn_A 91 SVNV 94 (95)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 410
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.54 E-value=5e-13 Score=117.24 Aligned_cols=137 Identities=10% Similarity=0.132 Sum_probs=96.2
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCc----------cCCCeEEeeccccceeccccEEEEEE
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMA----------AKAPEIIVPLRNANAIQNHNAQFQCT 315 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~----------~~~p~~~~~~~~~~~~~g~~~~l~c~ 315 (591)
...|.|.+++..|.|.|+|.|.|..+.... .....+.+..... ..++.+...+....+.+|+.+.|.|.
T Consensus 80 ~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~ 158 (247)
T 2ghw_B 80 TLYLQMNSLRAEDTAVYYCARDRSYYLDYW-GQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCR 158 (247)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEEEE-CCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEE
T ss_pred EEEEEECcCCHHHCEEEEEeeeccCCcccc-CCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEE
Confidence 357999999999999999999987322111 1223555553211 23455666666777899999999999
Q ss_pred EcCCCCCeeEEec--CCccC------------CCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eeeeEE
Q psy12425 316 ITGCPKPTISWLK--GSREI------------TPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKAEL 380 (591)
Q Consensus 316 ~~~~p~~~v~W~~--~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~~l 380 (591)
+.+.|.+.+.|++ ++..+ ....++.+...+...+|.|.++..+|+|.|+|.|.|..+.. .....|
T Consensus 159 ~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l 238 (247)
T 2ghw_B 159 ASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKV 238 (247)
T ss_dssp ESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEE
T ss_pred eCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEE
Confidence 9999999999998 44433 11345555555567789999999999999999999864433 233455
Q ss_pred EEe
Q psy12425 381 IIM 383 (591)
Q Consensus 381 ~v~ 383 (591)
.|.
T Consensus 239 ~V~ 241 (247)
T 2ghw_B 239 EVK 241 (247)
T ss_dssp EEC
T ss_pred EEC
Confidence 554
No 411
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.54 E-value=3.9e-14 Score=105.73 Aligned_cols=97 Identities=27% Similarity=0.535 Sum_probs=86.6
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+..++..++|.|.++..+|+|.|+|.|.|
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 35788888888888999999999999999999999999999999888888888888888999999999999999999999
Q ss_pred CCcceeeeeEEEEecCC
Q psy12425 370 KGGVKSTKAELIIMTAP 386 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~~p 386 (591)
..|.....+.|.|..+|
T Consensus 91 ~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCcEEEEEEEEEEcCC
Confidence 99998888888887654
No 412
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1.4e-14 Score=106.82 Aligned_cols=87 Identities=18% Similarity=0.281 Sum_probs=70.0
Q ss_pred CceeeeecCCeEEEEEEeccC---CCceEEEEECCE-Eeec--CCceeEEEe-C-----CeEEEEEcccCCCCceEEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGD---QPMEVSLTKNGR-VVQS--DDRFKFTVL-D-----DYIIIFIKEIRKEDAGDYTVN 69 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~---p~~~v~W~~~~~-~~~~--~~~~~~~~~-~-----~~~~l~i~~~~~~d~g~Y~c~ 69 (591)
|.++.|.+|++++|.|.+.|. |.|.|.|||+.. .+.. ..++.+... . ...+|.|.++++.|+|.|+|.
T Consensus 19 P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Ce 98 (118)
T 2edn_A 19 PDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLE 98 (118)
T ss_dssp CCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEE
T ss_pred CCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEE
Confidence 788999999999999999875 789999999752 2222 234444321 1 147999999999999999999
Q ss_pred EEcCCeeeEEEEEEEEecC
Q psy12425 70 LSNSSGSVSGTFTINITGL 88 (591)
Q Consensus 70 ~~n~~g~~~~~~~l~v~~~ 88 (591)
|.|..|..+..+.|.|..+
T Consensus 99 vsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 99 VKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp EECSSCEEEEEECCEEECC
T ss_pred EEEcCCcEEEEEEEEEEcC
Confidence 9999999999999999763
No 413
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.54 E-value=3.6e-14 Score=105.79 Aligned_cols=95 Identities=22% Similarity=0.267 Sum_probs=77.8
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCce-EEeceeeeeEEEEcCcccCceEEEEEEEEc
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSW-IRVGNTRFTTMAITGLSPGHQYEFRVYAEN 558 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n 558 (591)
..|.+|.++.+...+.+++.|+|++|...+ +.+.+|+|+|+......| ..........+.|.+|.|++.|.|+|+|.|
T Consensus 6 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~-g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2djs_A 6 SGPSTVPIMHQVSATMRSITLSWPQPEQPN-GIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRART 84 (108)
T ss_dssp CCCCCCSCCEEEEECSSEEEEECCCCSCCS-SCEEEEEEEEEETTSCSTTCEEEEESSSEEEEESCCTTCEEEEEEEEEE
T ss_pred CCCCCCcceEEEecCCCEEEEEECCCCCCC-CeEEEEEEEEEECCCCCcceeEEecCccEEEEcCCCCCCEEEEEEEEEe
Confidence 578899999999999999999999986444 479999999987765444 223345668999999999999999999999
Q ss_pred CCcCCCCCCCcceEEec
Q psy12425 559 VYGRSDPSTTSDLITTY 575 (591)
Q Consensus 559 ~~G~~~~s~~~~~~~t~ 575 (591)
..|.|++|....+.|.+
T Consensus 85 ~~G~g~~S~~~~~~T~~ 101 (108)
T 2djs_A 85 VAGYGKFSGKMCFQTLT 101 (108)
T ss_dssp SSCEEEECCCEEEECCC
T ss_pred CCEECCCCCCEEEEeCC
Confidence 99999999887654433
No 414
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.54 E-value=1.4e-13 Score=114.72 Aligned_cols=154 Identities=12% Similarity=0.128 Sum_probs=104.4
Q ss_pred eeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeee--EEEEEE
Q psy12425 6 YIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV--SGTFTI 83 (591)
Q Consensus 6 ~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~--~~~~~l 83 (591)
.|.+|++|+|.|.+.+ +.+.+.|+|+|..+...... .........|.|.+++++|+|.|+|.+.|..+.. +..+.|
T Consensus 14 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l 91 (188)
T 1oll_A 14 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDL 91 (188)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEE
T ss_pred cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEE
Confidence 6899999999999975 45789999999877532110 0112345689999999999999999999876543 455788
Q ss_pred EEecCCCCCC---CCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEE
Q psy12425 84 NITGLPGPPI---GPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 160 (591)
Q Consensus 84 ~v~~~p~~p~---~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 160 (591)
.|...+..|. .+ ......+..++|.|.... . . ..|.+.+.... .............|.|.++...+.+.
T Consensus 92 ~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~---~-~-~~~~w~k~g~~--~~~~~~~~~~~~~L~I~~v~~~d~G~ 163 (188)
T 1oll_A 92 VVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT---A-T-SMFLLLKEGRS--SHVQRGYGKVQAEFPLGPVTTAHRGT 163 (188)
T ss_dssp EEESCSCCCEEEEES-CSEEETTCEEEEEEECSS---S-C-SEEEEEEESSS--CEEEEEECSSEEEEEEEECCGGGCEE
T ss_pred EecccCCCCeEEECC-CCccccCCEEEEEEEcCC---C-C-CEEEEEECCcc--ccccccCCCceeEEEECCCCcCCCcE
Confidence 8876433332 11 223457889999998543 1 1 23444333211 11111223456789999999999999
Q ss_pred EEEEEEccC
Q psy12425 161 FHVMAVNEN 169 (591)
Q Consensus 161 ~~~~a~n~~ 169 (591)
|+|.|.|..
T Consensus 164 Y~C~a~n~~ 172 (188)
T 1oll_A 164 YRCFGSYNN 172 (188)
T ss_dssp EEEECEEET
T ss_pred EEEEEEcCC
Confidence 999999864
No 415
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.54 E-value=8.7e-14 Score=122.58 Aligned_cols=125 Identities=10% Similarity=0.152 Sum_probs=88.8
Q ss_pred ceeeecCcccCCcEEEEEEEEcCCCCCCCC--CCcceEEEcCCCccCCCeEE-eeccccceeccccEEEEEEEcCCCCCe
Q psy12425 247 SQINIPNLIEGRQYEFRVYAQNEAGLSLPS--SASNSVQIKDPMAAKAPEII-VPLRNANAIQNHNAQFQCTITGCPKPT 323 (591)
Q Consensus 247 ~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s--~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~l~c~~~~~p~~~ 323 (591)
..|.|.+++..|.|.|+|.+.|..+..... .....+.+..+ +.+|.+. ..+....+.+|+.+.|.|.+.+.|.|.
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~--~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~ 167 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH--TPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANAN 167 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT--SCCSCCEECCCSEEECCTTCCEEECCCEESCTTCE
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc--CCCCeEEEecCceEEecCCCcEEEEEEecCCCCCe
Confidence 589999999999999999999976643221 12344555432 2233333 333456677899999999999999999
Q ss_pred eEEecCCccCCCCCce----------------------EEEEeCCeEEEEEcceecccceEEEEEEEeCCcce
Q psy12425 324 ISWLKGSREITPSARH----------------------HIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK 374 (591)
Q Consensus 324 v~W~~~~~~~~~~~~~----------------------~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~ 374 (591)
+.|++++..+...... ..... ....|.|.++..+|+|.|+|.|.|..|..
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 239 (250)
T 2fbo_J 168 VTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS-GARNLVIRAAKITDAGRVWCELATGQGEL 239 (250)
T ss_dssp EEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE-TTTEEEECSCCGGGCEEEEEEEESSSSGG
T ss_pred eEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccC-CccEEEEecCCcccCEEEEEEecCCcccc
Confidence 9999998776542211 11111 11379999999999999999999966644
No 416
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.54 E-value=2.6e-14 Score=123.06 Aligned_cols=195 Identities=11% Similarity=0.144 Sum_probs=103.8
Q ss_pred EEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeE-Eeeccccc-eeccccEEEEEEEcCCC----CCeeEEecCCccC
Q psy12425 260 YEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEI-IVPLRNAN-AIQNHNAQFQCTITGCP----KPTISWLKGSREI 333 (591)
Q Consensus 260 ~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~-~~~~~~~~-~~~g~~~~l~c~~~~~p----~~~v~W~~~~~~~ 333 (591)
|.|.|...+..+.. .++....+|.+ +..+.... +..|+.+.|.|.+.|.. ...|.|+++|..+
T Consensus 1 ~~~~~~~~~~~~~c-----------~~~~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l 69 (240)
T 4acp_A 1 GTKSCDKTHTCPPC-----------PAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEV 69 (240)
T ss_dssp ---------------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEE
T ss_pred CceeeeeeecCCCC-----------CccccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCccc
Confidence 56778777765531 11111123444 44444444 55699999999999864 3479999999887
Q ss_pred CCCCceEE-E-EeCC---eEEEEEcceecccceEEEEEEEeCCcceeeeeEEE----EecCCcccCCCCcccceeecCCC
Q psy12425 334 TPSARHHI-F-AEGD---TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELI----IMTAPKFNVPPRFRDTAYFDKGE 404 (591)
Q Consensus 334 ~~~~~~~~-~-~~~~---~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~----v~~~p~~~~~~~~~~~~~~~~g~ 404 (591)
........ . .++. ...|.|.....+|.|.|+|.|.|..+.......+. +..+|.+...+.. .....|.
T Consensus 70 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~---~~~~~g~ 146 (240)
T 4acp_A 70 HNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPS---RDELTKN 146 (240)
T ss_dssp CCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCC---GGGGGSS
T ss_pred CCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCC---hHHhcCC
Confidence 54321111 1 1121 12577777777789999999999877443322222 2334444322211 1112388
Q ss_pred eEEEEEeeec-cCCC-eEEEeeCCeEeeeccceEEEecCC-----eeEEEEeccCCCcceeEEEEEEcCCC
Q psy12425 405 NVVVKIPFTG-YPKP-KITWYRDNEVIESGGHFHVETSER-----HAILTIRDASNVDTAPYRVVAENDLG 468 (591)
Q Consensus 405 ~~~l~c~~~~-~p~~-~v~W~~~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~~~g~y~c~a~n~~g 468 (591)
.+.|.|.+.+ .|.+ .+.|+++|..+............+ ...|.+......+.+.|+|.|.+..-
T Consensus 147 ~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 147 QVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp EEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 9999999998 4554 899999998864321111111111 24556665555678999999999843
No 417
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.54 E-value=9.2e-14 Score=103.45 Aligned_cols=85 Identities=15% Similarity=0.151 Sum_probs=68.4
Q ss_pred CceeeeecCCeEEEEEEeccCCC---ceEEEEECCEEeec---CCceeEEEe------CCeEEEEEcccCCCCceEEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQP---MEVSLTKNGRVVQS---DDRFKFTVL------DDYIIIFIKEIRKEDAGDYTVN 69 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~---~~v~W~~~~~~~~~---~~~~~~~~~------~~~~~l~i~~~~~~d~g~Y~c~ 69 (591)
|..+.+.+|++++|.|.+.|.|. +.|.|+|++..... ..++.+... ....+|.|.+++.+|+|.|+|.
T Consensus 11 p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 90 (108)
T 3cx2_A 11 PQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCE 90 (108)
T ss_dssp CCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEE
T ss_pred CCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEE
Confidence 77899999999999999999988 99999998732221 234444321 1246899999999999999999
Q ss_pred EEcCCeeeEEEEEEEEe
Q psy12425 70 LSNSSGSVSGTFTINIT 86 (591)
Q Consensus 70 ~~n~~g~~~~~~~l~v~ 86 (591)
|.|..|..+..+.|.|.
T Consensus 91 a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 91 VSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp EECSSCEEEEEEEEEEE
T ss_pred EecCCCceEEEEEEEEe
Confidence 99999999999999885
No 418
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.54 E-value=5.9e-14 Score=101.73 Aligned_cols=80 Identities=15% Similarity=0.327 Sum_probs=70.7
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+ +.|.+.+.|+|+|..+..+.++.+...+...+|.|.+++.+|+|.|+|.| |.....+
T Consensus 15 ~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~ 89 (95)
T 2k1m_A 15 PRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKF 89 (95)
T ss_dssp CCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTEEEEE
T ss_pred CCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCceEEE
Confidence 567899999999999999 78899999999999998888888888888889999999999999999999 4455567
Q ss_pred EEEEe
Q psy12425 82 TINIT 86 (591)
Q Consensus 82 ~l~v~ 86 (591)
.|.|.
T Consensus 90 ~l~V~ 94 (95)
T 2k1m_A 90 DLKVI 94 (95)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77664
No 419
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.54 E-value=4e-14 Score=105.51 Aligned_cols=99 Identities=22% Similarity=0.243 Sum_probs=80.8
Q ss_pred CCCCCCCCCeeee--ecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEE
Q psy12425 480 DRPDPPQFPTVED--IGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAE 557 (591)
Q Consensus 480 ~~p~~p~~~~~~~--~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~ 557 (591)
..|.+|.++.+.. .+.+++.|+|++|. +.+..+.+|+|+|+......|.... ...+.+.|.+|.+++.|.|+|+|.
T Consensus 6 ~~P~~P~~l~~~~~~~~~~sv~l~W~~p~-~~~g~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~l~~L~p~t~Y~~~V~A~ 83 (108)
T 2dm4_A 6 SGPDAPRNLQLSLPREAEGVIVGHWAPPI-HTHGLIREYIVEYSRSGSKMWASQR-AASNFTEIKNLLVNTLYTVRVAAV 83 (108)
T ss_dssp CCTTSCEEEEEECCTTCSSCEEEEEECCS-CCSSCEEEEEEEEEETTCSCCEEEE-ESSSEEEECSCCSSCEEEEEEEEE
T ss_pred CCCcCCcCeEEEEeccCCCEEEEEEcCCC-CCCCcEEEEEEEEEECCCCCeEEec-CCccEEEeCCCCCCCEEEEEEEEE
Confidence 5688898887765 57889999999987 4555899999999988877787653 345699999999999999999999
Q ss_pred cCCcCCCCCCCcceEEeccccccC
Q psy12425 558 NVYGRSDPSTTSDLITTYGELLSG 581 (591)
Q Consensus 558 n~~G~~~~s~~~~~~~t~~~~p~~ 581 (591)
|..|.|++|....+ +|...+|+.
T Consensus 84 n~~G~g~~S~~~~~-~T~~~~P~~ 106 (108)
T 2dm4_A 84 TSRGIGNWSDSKSI-TTIKGSGPS 106 (108)
T ss_dssp ESSCEEEECCCEEE-ECCSCSSCC
T ss_pred CCCceeCCCCCEEE-ECCCCCCCC
Confidence 99999999987654 565555543
No 420
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.54 E-value=6.9e-14 Score=102.56 Aligned_cols=80 Identities=21% Similarity=0.360 Sum_probs=72.4
Q ss_pred eeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEEEE
Q psy12425 5 LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 84 (591)
Q Consensus 5 ~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~l~ 84 (591)
+.+.+|+++.|.|.+. .|.+.+.|+|+|..+..+.++++...+....|.|.+++.+|+|.|+|.| |....++.|.
T Consensus 18 ~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~ 92 (100)
T 2yuv_A 18 YQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELF 92 (100)
T ss_dssp EEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEE
T ss_pred cEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEE
Confidence 6789999999999998 7999999999999998888888888888889999999999999999999 5667778899
Q ss_pred EecCC
Q psy12425 85 ITGLP 89 (591)
Q Consensus 85 v~~~p 89 (591)
|..+|
T Consensus 93 V~~~P 97 (100)
T 2yuv_A 93 VRSGP 97 (100)
T ss_dssp ECCSC
T ss_pred EecCC
Confidence 88765
No 421
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.53 E-value=2.4e-13 Score=118.11 Aligned_cols=174 Identities=12% Similarity=0.192 Sum_probs=109.9
Q ss_pred cccceeccccEEEEEEEcCCC----CCeeEEecCCccC--------C----------------CCCceEEEEe--CCeEE
Q psy12425 300 RNANAIQNHNAQFQCTITGCP----KPTISWLKGSREI--------T----------------PSARHHIFAE--GDTYT 349 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p----~~~v~W~~~~~~~--------~----------------~~~~~~~~~~--~~~~~ 349 (591)
..+.+.+|+.+.|.|.+.+.+ ...+.|++..... . ...++.+..+ ....+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 87 (239)
T 3tv3_H 8 GPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVF 87 (239)
T ss_dssp SCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEE
T ss_pred CCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEE
Confidence 456688999999999998765 3489998732110 0 1134444433 34678
Q ss_pred EEEcceecccceEEEEEEEeCCc-------------ceeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEee
Q psy12425 350 LIINSVYGVDADEYVCRAVNKGG-------------VKSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPF 412 (591)
Q Consensus 350 l~i~~~~~~d~g~y~c~a~n~~g-------------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~ 412 (591)
|.|.+++.+|+|.|.|.+.+..+ .......+.|.. +|.+...+ ....+..|+.+.|.|.+
T Consensus 88 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~---~~~~~~~g~~v~l~C~~ 164 (239)
T 3tv3_H 88 LKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLA---PSSKSTSGGTAALGCLV 164 (239)
T ss_dssp EEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEEC---CCCCC--TTEEEEEEEE
T ss_pred EEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEEC---CChhhccCCcEEEEEEE
Confidence 99999999999999999987632 112334566642 22222111 11223569999999999
Q ss_pred ec-cCCC-eEEEeeCCeEeeeccceEEEecC----CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEE
Q psy12425 413 TG-YPKP-KITWYRDNEVIESGGHFHVETSE----RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 413 ~~-~p~~-~v~W~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
.+ .|.+ .+.|++++..+...........+ ..+.|+|.....++ |.|+|.|.|..+.......+.
T Consensus 165 ~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 234 (239)
T 3tv3_H 165 KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 234 (239)
T ss_dssp EEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred eeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEec
Confidence 88 4544 58899998643211111111111 13568888888888 999999999987655554444
No 422
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.53 E-value=1.8e-14 Score=110.01 Aligned_cols=99 Identities=21% Similarity=0.255 Sum_probs=80.5
Q ss_pred ecCCCCCCCCCeeeeecCCeeEEEeeccc-cCCCcceeeEEEEeeeCCCCceEEe--ceeeeeEEEEcCcccCceEEEEE
Q psy12425 478 ISDRPDPPQFPTVEDIGHDSLALVWRAPI-WDGGSNITNYIVEKREHPMSSWIRV--GNTRFTTMAITGLSPGHQYEFRV 554 (591)
Q Consensus 478 v~~~p~~p~~~~~~~~~~~~v~l~W~~p~-~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~~l~~~~~Y~~~v 554 (591)
...+|.+|.++.+...+.+++.|+|++|. ..++ .+.+|+|+|+......|... .......+.|.+|.|++.|.|+|
T Consensus 14 ~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 92 (120)
T 1x5f_A 14 TGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHG-DNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRV 92 (120)
T ss_dssp CCCCCCCCEEEEEEEECSSCEEEEEECCSSCSSC-CSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCCCCCcEEEecCCCEEEEEECCCCCCCCC-cEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCCEEEEEE
Confidence 44678899999999999999999999887 4444 89999999998765555543 34457899999999999999999
Q ss_pred EEEcCCcCCCCCCCcceEEeccc
Q psy12425 555 YAENVYGRSDPSTTSDLITTYGE 577 (591)
Q Consensus 555 ~A~n~~G~~~~s~~~~~~~t~~~ 577 (591)
+|.|..|.|.+|....+.|.++.
T Consensus 93 ~A~n~~G~g~~S~~~~~~T~~~~ 115 (120)
T 1x5f_A 93 MAQNKHGSGESSAPLRVETQPES 115 (120)
T ss_dssp EEECSSCEEEECCCEEEECCCCC
T ss_pred EEECCCccCCCCCCEEEEeCCCC
Confidence 99999999999988765443333
No 423
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=3.4e-14 Score=105.51 Aligned_cols=97 Identities=18% Similarity=0.271 Sum_probs=80.8
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcC
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENV 559 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~ 559 (591)
+.|.+|.++++...+.+++.|+|++|...++ .+.+|+|+|+......|.... ...+.+.|.+|.|++.|.|+|+|.|.
T Consensus 6 ~~P~~P~~l~~~~~~~~si~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~A~n~ 83 (106)
T 2ed8_A 6 SGPGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIE-VDGLSYKLEGLKKFTEYSLRFLAYNR 83 (106)
T ss_dssp CCCCCCEEEEEECSSTTEEEEEEECCSSCSS-CCCEEEEEEEETTTCCEEEEE-ECSSCEEEESCCTTCEEEEEEEEECS
T ss_pred CCCcCCceeEEEecCCCEEEEEECCCCCCCC-CeeEEEEEEEECCCCceEEEe-CCccEEEECCCCCCCEEEEEEEEEeC
Confidence 5788999999999999999999998864444 899999999988777776553 34689999999999999999999999
Q ss_pred CcCCCCCCCcceEEeccccc
Q psy12425 560 YGRSDPSTTSDLITTYGELL 579 (591)
Q Consensus 560 ~G~~~~s~~~~~~~t~~~~p 579 (591)
.|.|.+|....+ +|.+.+|
T Consensus 84 ~G~g~~S~~~~~-~T~~~~P 102 (106)
T 2ed8_A 84 YGPGVSTDDITV-VTLSDSG 102 (106)
T ss_dssp SCEEEECCCEEE-ECCCCCC
T ss_pred CccCCCcCCEEE-EcCCCCC
Confidence 999999987654 5554443
No 424
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.53 E-value=6e-13 Score=113.73 Aligned_cols=191 Identities=15% Similarity=0.099 Sum_probs=128.4
Q ss_pred CCCCCCCCcceEEe-cCceEEEEecCCCCCCCcceeeEEEEEEecCC------CceEEEEe--ecCcceEEEcCCcCCcE
Q psy12425 88 LPGPPIGPLDVSEI-TKHTCTLHWNPPKYDGGLKVTHYVVERRDISM------PHWICIST--TCHDTTFIVQGLTEGQE 158 (591)
Q Consensus 88 ~p~~p~~~~~~~~~-~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~------~~~~~~~~--~~~~~~~~i~~l~~~~~ 158 (591)
+|.+|.. +..... ...+++++|.++.. ++.. ..|.+.++.... ..+..+.. ......+.+.+|.++..
T Consensus 4 pP~~P~~-l~c~~~~~~~~~~~~W~p~~~-~~~~-~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 80 (215)
T 1cd9_B 4 PPASPSN-LSCLMHLTTNSLVCQWEPGPE-THLP-TSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQY 80 (215)
T ss_dssp CCCCCEE-EEEEEETTTTEEEEEEECCSC-CSSC-CEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSC
T ss_pred CCCCCee-eeeecCCCcccEEEEecCCCC-CCCc-eeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceE
Confidence 3444443 333444 46799999998764 3333 569998876532 22433332 12345667778999999
Q ss_pred EEEEEEEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEee------cCCeEEEEEecCCCCCCcceEEEEEEee-ec
Q psy12425 159 YLFHVMAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQV------GGDFVNLSWDKPLDDGGSRIQGYWIDKH-EV 231 (591)
Q Consensus 159 y~~~~~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~------~~~~v~l~w~~~~~~~~~~~~~y~~~~~-~~ 231 (591)
|.|+|.|.|..|.+..... . ........|.+|..+.+... ....+.|+|.+|.. .+..+..|.|.++ ..
T Consensus 81 Y~~~V~A~N~~G~~~s~~~-~--~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~~~l~Y~v~y~~~~ 156 (215)
T 1cd9_B 81 MAIWVQAENMLGSSESPKL-C--LDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEYMEQECELRYQPQL 156 (215)
T ss_dssp EEEEEEEEETTEEEECCCE-E--ECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG-GTTSCEEEEEEEEESS
T ss_pred EEEEEEEECCCCCccCccE-E--EchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCeEEEEEEEEEccCC
Confidence 9999999999887532211 1 11111235667766665554 56789999998864 3334579999999 67
Q ss_pred CCCccEEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEc
Q psy12425 232 GSDAWQRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIK 285 (591)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~ 285 (591)
+...|..+.........+.+.+|.++..|.++++|.+..|.+.++..+..+.+.
T Consensus 157 ~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~ 210 (215)
T 1cd9_B 157 KGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLR 210 (215)
T ss_dssp TTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEEC
T ss_pred CCCCcEEEecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCcccee
Confidence 777888765444456789999999999999999999988877776666555544
No 425
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.53 E-value=5.3e-14 Score=120.98 Aligned_cols=126 Identities=18% Similarity=0.175 Sum_probs=84.7
Q ss_pred CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecC-CCCCC--CCCeeeeecCCeeEEEeeccccCCCcceeeEEE
Q psy12425 442 RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISD-RPDPP--QFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV 518 (591)
Q Consensus 442 ~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~-~p~~p--~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v 518 (591)
....+++.+|.+...|.|++.|.|..|.+..+..+.+.. .+.+| ..+.+...+.+++.|+|.+|..++| .|++|+|
T Consensus 44 ~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~~~~~~~~sv~l~W~~P~~~~G-~i~~Y~v 122 (232)
T 4go6_B 44 DYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSG-KIIEYSV 122 (232)
T ss_dssp -----CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEEEEEEETTEEEEEEECCSCCSS-CCCEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCeeeEEecCCCEEEEEEeCCCCCCC-ceeeEEE
Confidence 456789999999999999999999999875443333322 22222 2233445678899999999987766 8999999
Q ss_pred EeeeCCCCc-------------eEEeceeee--eEE-------EEcCcccCceEEEEEEEEcCCcCCCCCCC
Q psy12425 519 EKREHPMSS-------------WIRVGNTRF--TTM-------AITGLSPGHQYEFRVYAENVYGRSDPSTT 568 (591)
Q Consensus 519 ~~~~~~~~~-------------~~~~~~~~~--~~~-------~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~ 568 (591)
+++...... |..+..... ..+ .+.+|.+++.|.|||+|.|.+|.|++|.+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v 194 (232)
T 4go6_B 123 YLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQV 194 (232)
T ss_dssp EEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSEEEEEEEEEECSSCBCCCEEE
T ss_pred EEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccCCceEEEEEEECCCcCCCCccc
Confidence 998765433 222211111 122 24578999999999999999999998864
No 426
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.53 E-value=9.5e-15 Score=151.41 Aligned_cols=225 Identities=16% Similarity=0.194 Sum_probs=156.0
Q ss_pred EEEEEcccCCCCceEEEEEE-EcCCee----eEEEEEEEEecCCCCCCCC--cceEEecCceEEEEecCCCCCCCcceee
Q psy12425 51 IIIFIKEIRKEDAGDYTVNL-SNSSGS----VSGTFTINITGLPGPPIGP--LDVSEITKHTCTLHWNPPKYDGGLKVTH 123 (591)
Q Consensus 51 ~~l~i~~~~~~d~g~Y~c~~-~n~~g~----~~~~~~l~v~~~p~~p~~~--~~~~~~~~~~~~l~w~~p~~~~~~~~~~ 123 (591)
..+.|.+|.+...|.|++.| .|..|. ...+..+.+.+.+.+|..| +.+......++.|+|.+|...+| .+.+
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG-~I~~ 627 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITH 627 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSS-SCSE
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCC-CeeE
Confidence 57889999999999999999 888876 3333445555555455444 34556677899999999975555 5889
Q ss_pred EEEEEEecCCC-----------------------------------------------------------------ceEE
Q psy12425 124 YVVERRDISMP-----------------------------------------------------------------HWIC 138 (591)
Q Consensus 124 y~~~~~~~~~~-----------------------------------------------------------------~~~~ 138 (591)
|.|.++..... .|..
T Consensus 628 Y~V~~~~~~~~~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~ 707 (897)
T 2dtg_E 628 YLVFWERQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFED 707 (897)
T ss_dssp EECCEEEECCCCSCTTCSSSCSCCCCCC----------------------------------------------------
T ss_pred EEEEEEECCCCccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEE
Confidence 99987653220 1110
Q ss_pred E--------------------------------EeecCcceEEEcCCcCCcEEEEEEEEEccCCCCCCCCccCcccccCC
Q psy12425 139 I--------------------------------STTCHDTTFIVQGLTEGQEYLFHVMAVNENGMGPPLEGINPIKAKSP 186 (591)
Q Consensus 139 ~--------------------------------~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~~~~~~~~~~~~~~~~ 186 (591)
. ........+.+.+|.+++.|.|+|.|.|..|.+........+...+.
T Consensus 708 ~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~ 787 (897)
T 2dtg_E 708 YLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTM 787 (897)
T ss_dssp ----------------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECC
T ss_pred ccCceEEccCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEecc
Confidence 0 00113368999999999999999999999997664221222333222
Q ss_pred --CCCCCCCCCCeEEeecCCeEEEEEecCCCCCCcceEEEEEEeeecCCCccEEEEe--eecCCceeeecCcccCCcEEE
Q psy12425 187 --YDKPSPPGIPVVTQVGGDFVNLSWDKPLDDGGSRIQGYWIDKHEVGSDAWQRVNV--AICAPSQINIPNLIEGRQYEF 262 (591)
Q Consensus 187 --~~~p~~~~~~~~~~~~~~~v~l~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~l~~~~~~~y 262 (591)
..+|.+|..+.+.....+++.|+|.+|..+++ .+.+|.|+++..+...+..... .......+++.+|.++ .|.|
T Consensus 788 ~~~~~p~~P~~l~~~~~~~~sv~LsW~~P~~~nG-~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~ 865 (897)
T 2dtg_E 788 PEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNG-LIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSV 865 (897)
T ss_dssp CCCCCCCCCCCCCCCSSSSSCCCCCCCCCCSCSS-CEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EECC
T ss_pred CccCCCCCCcceEEEeCCCCEEEEEECCCCCCCC-CEEEEEEEEEECCCcceEEEEeeeeecccCcEEECCCCCC-cEEE
Confidence 24567777777777788899999999876554 5899999998766422111110 0124567899999999 6999
Q ss_pred EEEEEcCCCCCCCCCC
Q psy12425 263 RVYAQNEAGLSLPSSA 278 (591)
Q Consensus 263 ~c~a~n~~g~~~~s~~ 278 (591)
+++|.|..|.+.++..
T Consensus 866 rV~A~n~~G~G~~S~~ 881 (897)
T 2dtg_E 866 RIRATSLAGNGSWTEP 881 (897)
T ss_dssp CCCEEETTBCCCCCCC
T ss_pred EEEEEeCCcccCCCCC
Confidence 9999999998876543
No 427
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=1.1e-13 Score=101.63 Aligned_cols=94 Identities=28% Similarity=0.490 Sum_probs=82.2
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEE-EeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF-AEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+. ..+...+|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 4678888888888999999999999999999999999999998877766544 456677999999999999999999999
Q ss_pred CCcceeeeeEEEEec
Q psy12425 370 KGGVKSTKAELIIMT 384 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~ 384 (591)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999988888888753
No 428
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=7.1e-14 Score=103.28 Aligned_cols=87 Identities=14% Similarity=0.146 Sum_probs=77.3
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+ +.|.+.+.|+|++..+..+.++.+...+....|.|.+++.+|+|.|+|. .|.....+
T Consensus 15 ~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~ 89 (103)
T 2dku_A 15 LTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD----IGQAQSRA 89 (103)
T ss_dssp CCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----CSSCBCCE
T ss_pred CCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----eCCceEEE
Confidence 567899999999999995 8899999999999999888888888777788999999999999999998 56667778
Q ss_pred EEEEecCCCCCC
Q psy12425 82 TINITGLPGPPI 93 (591)
Q Consensus 82 ~l~v~~~p~~p~ 93 (591)
.|.|...|.+|.
T Consensus 90 ~l~V~~~p~~p~ 101 (103)
T 2dku_A 90 QLLVQGRRSGPS 101 (103)
T ss_dssp EEEEECSCCCCS
T ss_pred EEEEeCccCCCC
Confidence 999998887764
No 429
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.53 E-value=1.2e-13 Score=101.37 Aligned_cols=93 Identities=26% Similarity=0.449 Sum_probs=84.6
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeC
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
.+|.+...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+..++...+|.|.++..+|+|.|+|.|.|.
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 46778888888889999999999999999999999999999998888888888888889999999999999999999999
Q ss_pred CcceeeeeEEEEe
Q psy12425 371 GGVKSTKAELIIM 383 (591)
Q Consensus 371 ~g~~~~~~~l~v~ 383 (591)
.|.....+.|.|.
T Consensus 85 ~g~~~~~~~l~V~ 97 (99)
T 3puc_A 85 AGSVSSSCKLTIK 97 (99)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEeEEEEEEEE
Confidence 9998888888775
No 430
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.53 E-value=1.3e-13 Score=98.57 Aligned_cols=89 Identities=19% Similarity=0.268 Sum_probs=77.5
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
..+|.+...+.+..+.+|+.+.|.|.+.+ +.+.+.|+++|..+..+.++.+..++..++|.|.++..+|+|.|+|.|.|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 35788888889999999999999999986 45789999999999888899988888889999999999999999999977
Q ss_pred CCcceeeeeEEEEe
Q psy12425 370 KGGVKSTKAELIIM 383 (591)
Q Consensus 370 ~~g~~~~~~~l~v~ 383 (591)
. ..++.|.|.
T Consensus 82 ~----~~sa~L~V~ 91 (93)
T 1waa_A 82 T----KSAANLKVK 91 (93)
T ss_dssp E----EEEEEEEEE
T ss_pred C----cEEEEEEEE
Confidence 4 345666664
No 431
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=3.2e-14 Score=104.31 Aligned_cols=81 Identities=21% Similarity=0.235 Sum_probs=70.3
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|+|..+..... .......+|.|.+++.+|+|.|+|.|.|..|..+..+
T Consensus 18 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~---~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 94 (99)
T 2yr3_A 18 LKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARS---TCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSA 94 (99)
T ss_dssp CCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCC---EEETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEEC
T ss_pred CCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccce---EeeCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEE
Confidence 6678899999999999999999999999999998865532 2234567999999999999999999999999988887
Q ss_pred EEEE
Q psy12425 82 TINI 85 (591)
Q Consensus 82 ~l~v 85 (591)
.|.|
T Consensus 95 ~l~V 98 (99)
T 2yr3_A 95 WVTV 98 (99)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 7776
No 432
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.52 E-value=2.1e-14 Score=105.64 Aligned_cols=84 Identities=19% Similarity=0.396 Sum_probs=70.8
Q ss_pred ceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCcee-EEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 3 NALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFK-FTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
..+.+.+|+++.|.|.+.|.|.+.+.|+|+|..+....+.. +....+..+|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 56889999999999999999999999999999987654321 23333445899999999999999999999999988888
Q ss_pred EEEEe
Q psy12425 82 TINIT 86 (591)
Q Consensus 82 ~l~v~ 86 (591)
.|.|.
T Consensus 96 ~l~Vv 100 (100)
T 3caf_A 96 HLDVV 100 (100)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88773
No 433
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.52 E-value=1.4e-13 Score=103.80 Aligned_cols=99 Identities=23% Similarity=0.478 Sum_probs=85.8
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCC-CCceEEEEeC-CeEEEEEcceecccceEEEEEEE
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-SARHHIFAEG-DTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
.+|.+...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+.. ..++.+..++ +..+|.|.++..+|+|.|+|.|.
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEE
Confidence 578888888889999999999999999999999999999988875 4566666554 35589999999999999999999
Q ss_pred eCCcceeeeeEEEEecCCccc
Q psy12425 369 NKGGVKSTKAELIIMTAPKFN 389 (591)
Q Consensus 369 n~~g~~~~~~~l~v~~~p~~~ 389 (591)
|..|.....+.|.|..+|...
T Consensus 94 N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 94 NEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp ETTEEEEEEEEEEEECCSCCC
T ss_pred cCCCeEEEEEEEEEeCCCCCC
Confidence 999999989999998877643
No 434
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=5.5e-14 Score=106.55 Aligned_cols=98 Identities=21% Similarity=0.286 Sum_probs=80.6
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcC
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENV 559 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~ 559 (591)
.+|.+|.++.+...+.+++.|+|++|...+ ..+.+|.|+|+......|... ....+.+.|.+|.+++.|.|+|+|.|.
T Consensus 16 ~~P~~P~~l~~~~~~~~si~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 93 (116)
T 1x5g_A 16 QLPGPAPNLRAYAASPTSITVTWETPVSGN-GEIQNYKLYYMEKGTDKEQDV-DVSSHSYTINGLKKYTEYSFRVVAYNK 93 (116)
T ss_dssp SCCCCCSSCEEEEEETTEEEEECCCCSCCS-SCCSEEEEEEEETTCCCCCCE-EECSSEEEECSCCTTCEEEEEEEEECS
T ss_pred CCCcCCCccEEEecCCCEEEEEEeCCCCCC-CcccEEEEEEEECCCCccEEE-ecCCceEEEcCCCCCCEEEEEEEEEcC
Confidence 478899999999999999999999886544 479999999998876666433 345679999999999999999999999
Q ss_pred CcCCCCCCCcceEEecccccc
Q psy12425 560 YGRSDPSTTSDLITTYGELLS 580 (591)
Q Consensus 560 ~G~~~~s~~~~~~~t~~~~p~ 580 (591)
.|.|.+|....+ +|.+.+|+
T Consensus 94 ~G~g~~S~~~~~-~T~~~~P~ 113 (116)
T 1x5g_A 94 HGPGVSTPDVAV-RTLSDSGP 113 (116)
T ss_dssp SCCCCBCCCCCE-ECCCSSCC
T ss_pred CCcCCCCCCEEE-ECCCCCCC
Confidence 999999987654 55554443
No 435
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=4.7e-14 Score=107.26 Aligned_cols=87 Identities=21% Similarity=0.260 Sum_probs=74.6
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeec-CCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQS-DDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.|.|.+.+.|+|+|..+.. ..++.+... . +|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 15 p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~-~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (118)
T 2eo9_A 15 PVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLEN-G--VLQIRYAKLGDTGRYTCIASTPSGEATWS 91 (118)
T ss_dssp CCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEET-T--EEEEESCCGGGCCCEEEEEECSSCEEEEE
T ss_pred CCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccC-C--EEEEccCCcCCCEEEEEEEEcCCCcEEEE
Confidence 6778999999999999999999999999999998865 344444332 2 79999999999999999999999999888
Q ss_pred EEEEEecCCCC
Q psy12425 81 FTINITGLPGP 91 (591)
Q Consensus 81 ~~l~v~~~p~~ 91 (591)
+.|.|...+.+
T Consensus 92 ~~l~V~~~~~p 102 (118)
T 2eo9_A 92 AYIEVQEFGVP 102 (118)
T ss_dssp CCEEEECCSCC
T ss_pred EEEEEEeCCCC
Confidence 99999876544
No 436
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.52 E-value=3.2e-13 Score=114.02 Aligned_cols=120 Identities=9% Similarity=0.118 Sum_probs=83.4
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCC--CCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCe
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLP--SSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPT 323 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~--s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~ 323 (591)
...|.|.+++..|.|.|+|.|.+..+.... .+....+.+... ..+|.+...+. ..+.+|+.+.|.|.+.+ +.+.
T Consensus 62 ~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~--~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~ 137 (201)
T 1nkr_A 62 KANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGL--YEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDM 137 (201)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECS--SCCCEEEEESC-SEECTTCEEEEEEEESS-CCSE
T ss_pred eEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeecc--CCCCceecCCC-CccCCCCeEEEEEeCCC-CCce
Confidence 467999999999999999999875321111 123344455432 34677766554 46889999999999987 5678
Q ss_pred eEEecCCccCCCCCceEEEEeCC-eEEEEEcceecccceEEEEEEEeCC
Q psy12425 324 ISWLKGSREITPSARHHIFAEGD-TYTLIINSVYGVDADEYVCRAVNKG 371 (591)
Q Consensus 324 v~W~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~c~a~n~~ 371 (591)
+.|++++..+...........+. ...|.|.+++ |+|.|+|.|.+..
T Consensus 138 ~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 138 YHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred EEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 99999987765322112212221 4579999998 9999999998753
No 437
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.52 E-value=1.1e-12 Score=115.54 Aligned_cols=141 Identities=13% Similarity=0.171 Sum_probs=97.9
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCC-CCCCcceEEEcCC-----------CccCCCeEEeeccccceeccccEEEE
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSL-PSSASNSVQIKDP-----------MAAKAPEIIVPLRNANAIQNHNAQFQ 313 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~-~s~~~~~~~~~~~-----------~~~~~p~~~~~~~~~~~~~g~~~~l~ 313 (591)
...|.|.+++..|.|.|.|.+.|..+... .......+.+... ....+|.+...+....+.+|+.+.|.
T Consensus 80 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~ 159 (256)
T 3umt_A 80 TAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSIT 159 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEE
T ss_pred EEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEE
Confidence 34599999999999999999988632110 1112344555431 11126677777777889999999999
Q ss_pred EEEcCCCCCeeEEecCC--ccCC------------CCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eeee
Q psy12425 314 CTITGCPKPTISWLKGS--REIT------------PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKA 378 (591)
Q Consensus 314 c~~~~~p~~~v~W~~~~--~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~ 378 (591)
|.+.+.+.+.+.|++.. .... ...++.....+...+|.|.+++.+|+|.|+|.|.|..+.. ....
T Consensus 160 C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt 239 (256)
T 3umt_A 160 CRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGT 239 (256)
T ss_dssp EEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCE
T ss_pred EEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCE
Confidence 99999998899999842 2111 1245666666777889999999999999999999865443 3346
Q ss_pred EEEEecCC
Q psy12425 379 ELIIMTAP 386 (591)
Q Consensus 379 ~l~v~~~p 386 (591)
.|.|..++
T Consensus 240 ~L~V~~~~ 247 (256)
T 3umt_A 240 KLEIKRAA 247 (256)
T ss_dssp EEEEC---
T ss_pred EEEEECCC
Confidence 66676544
No 438
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.52 E-value=9.9e-13 Score=110.95 Aligned_cols=125 Identities=18% Similarity=0.242 Sum_probs=100.1
Q ss_pred ecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEecCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEE
Q psy12425 439 TSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQISDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIV 518 (591)
Q Consensus 439 ~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v 518 (591)
.......+.|.+|.+...|.|++.|.|..|.+..........+| +|.++.+...+.+++.|+|++|. + ..+.+|.|
T Consensus 72 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p-~P~~l~~~~~~~~sv~l~W~~p~--~-~~i~~Y~v 147 (203)
T 2gee_A 72 VDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPP--S-IDLTNFLV 147 (203)
T ss_dssp EETTCCEEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCC-CCEEEEEEEEETTEEEEEEECCS--S-CCCSEEEE
T ss_pred cCCCccEEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCc-CCCceEEEEcCCCEEEEEEcCCC--C-CCccEEEE
Confidence 34567789999999999999999999998876554433334444 88889998899999999999874 3 37899999
Q ss_pred EeeeCCC-CceEEe-ceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCC
Q psy12425 519 EKREHPM-SSWIRV-GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPST 567 (591)
Q Consensus 519 ~~~~~~~-~~~~~~-~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~ 567 (591)
.|+.... ..|... .....+.+.|.+|.|++.|.|+|+|.|..|.|+++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~ 198 (203)
T 2gee_A 148 RYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR 198 (203)
T ss_dssp EEEETTCGGGCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred EEEECCCCCccEEEEcCCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCee
Confidence 9987543 334333 345668999999999999999999999999988754
No 439
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=1.3e-13 Score=101.17 Aligned_cols=85 Identities=13% Similarity=0.255 Sum_probs=71.9
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCC----------ceeEEEeCCeEEEEEcccCCCCceEEEEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD----------RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLS 71 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~----------~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~ 71 (591)
+.++.|.+|+++.|.|.+.+ .+.+.|+|||++|..+. ++++...+..++|.|.+++.+|+|.|+|...
T Consensus 15 l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~ 92 (112)
T 2e6q_A 15 LEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSC 92 (112)
T ss_dssp CCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEE
T ss_pred CCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEE
Confidence 56889999999999999987 77899999999998887 7777777777899999999999999977544
Q ss_pred cCCeeeEEEEEEEEecCCCC
Q psy12425 72 NSSGSVSGTFTINITGLPGP 91 (591)
Q Consensus 72 n~~g~~~~~~~l~v~~~p~~ 91 (591)
+ ....++.|.|...|..
T Consensus 93 ~---~~~ssA~L~V~~~p~~ 109 (112)
T 2e6q_A 93 P---GVQDSAALTIQESSGP 109 (112)
T ss_dssp T---TEEEEEEEEEECSSCS
T ss_pred C---CeeEEEEEEEeCCCcc
Confidence 3 2356789999887653
No 440
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.52 E-value=2.5e-13 Score=117.72 Aligned_cols=175 Identities=12% Similarity=0.179 Sum_probs=107.8
Q ss_pred cccceeccccEEEEEEEcCCC--CCee--EEecCCc--cC-------------------CCCCceEEEEe--CCeEEEEE
Q psy12425 300 RNANAIQNHNAQFQCTITGCP--KPTI--SWLKGSR--EI-------------------TPSARHHIFAE--GDTYTLII 352 (591)
Q Consensus 300 ~~~~~~~g~~~~l~c~~~~~p--~~~v--~W~~~~~--~~-------------------~~~~~~~~~~~--~~~~~l~i 352 (591)
..+.+.+|+.+.|.|.+.+.+ ...+ .|++... .. ....++.+..+ ....+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 87 (232)
T 3qhz_H 8 GPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTM 87 (232)
T ss_dssp CCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEE
T ss_pred CCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEE
Confidence 345688999999999997642 2344 9987321 00 01135555543 35678999
Q ss_pred cceecccceEEEEEEEeCC--------cceeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEEEeeeccCC--C
Q psy12425 353 NSVYGVDADEYVCRAVNKG--------GVKSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVKIPFTGYPK--P 418 (591)
Q Consensus 353 ~~~~~~d~g~y~c~a~n~~--------g~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~--~ 418 (591)
.+++.+|+|.|.|.+.+.. ........+.|.. +|.+...+ ....+..|+.+.|.|.+.+.++ .
T Consensus 88 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~---~~~~~~~g~~v~L~C~~~~~~P~~~ 164 (232)
T 3qhz_H 88 TNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLA---PSSKSTSGGTAALGCLVKDYFPEPV 164 (232)
T ss_dssp CSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEEC---C-------CEEEEEEEEEEEBSSCC
T ss_pred CcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEec---ccccccCCCcEEEEEEEeeEeCCCe
Confidence 9999999999999999763 1223345566652 23222111 1123456999999999987543 3
Q ss_pred eEEEeeCCeEeeeccceEEEecC----CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEe
Q psy12425 419 KITWYRDNEVIESGGHFHVETSE----RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQI 478 (591)
Q Consensus 419 ~v~W~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v 478 (591)
.+.|++++..+...........+ ..+.|.|......| |.|+|.|.|..+.......+.+
T Consensus 165 ~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 165 TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp EEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 67899998643211111111111 13568888888888 9999999999877655555543
No 441
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.52 E-value=5.7e-13 Score=113.86 Aligned_cols=127 Identities=14% Similarity=0.083 Sum_probs=97.2
Q ss_pred eeEEEEeccCCCcceeEEEEEEcCCCccc-eEEEEEec--CCCCCCCCCeeeee------cCCeeEEEeeccccCCCcce
Q psy12425 443 HAILTIRDASNVDTAPYRVVAENDLGMDS-AIVKIQIS--DRPDPPQFPTVEDI------GHDSLALVWRAPIWDGGSNI 513 (591)
Q Consensus 443 ~~~l~i~~~~~~~~g~y~c~a~n~~g~~~-~~~~~~v~--~~p~~p~~~~~~~~------~~~~v~l~W~~p~~~~~~~~ 513 (591)
...+.+.++.+...|.+++.|.|..|... ....+... .+|.+|.++.+... ..+++.|+|++|.. ++..+
T Consensus 67 ~~~~~~~~L~~~~~Y~~~V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~~~ 145 (215)
T 1cd9_B 67 NCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEYME 145 (215)
T ss_dssp EEEEEGGGCCTTSCEEEEEEEEETTEEEECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG-GTTSC
T ss_pred EEEECCcccccceEEEEEEEEECCCCCccCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCeEE
Confidence 45566678889999999999999999762 23344333 36889988887765 67889999998864 44455
Q ss_pred eeEEEEee-eCCCCceEEe--ceeeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcc
Q psy12425 514 TNYIVEKR-EHPMSSWIRV--GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSD 570 (591)
Q Consensus 514 ~~y~v~~~-~~~~~~~~~~--~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~ 570 (591)
.+|+|.|+ ......|..+ .......+.|.+|.|++.|.|+|+|.|..|.|.+|..+.
T Consensus 146 l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~ 205 (215)
T 1cd9_B 146 QECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSP 205 (215)
T ss_dssp EEEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCC
T ss_pred EEEEEEEccCCCCCCcEEEecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCC
Confidence 89999999 6677788754 233457899999999999999999999988776555443
No 442
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.52 E-value=8.4e-14 Score=120.28 Aligned_cols=129 Identities=16% Similarity=0.191 Sum_probs=85.7
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcC-CCCCee
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITG-CPKPTI 324 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~~v 324 (591)
...|.|.+++..|.|.|+|.|.|..|... ..+.+..+ +..........+.+|..+.|.|.+.| .|.|.|
T Consensus 82 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~-----~~v~~~~~-----~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i 151 (226)
T 4f80_A 82 KAALRIHNVTASDSGKYLCYFQDGDFYEK-----ALVELKVA-----ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQI 151 (226)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEE-----EEEEEEEE-----BCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEE
T ss_pred eEEEEEeeCchHHCeeEEEEEECCCcEEE-----EEEEEeec-----cceecccceeeeccCCceeeEEEeccCCCCCEE
Confidence 35799999999999999999999776432 22333211 11111222345678999999999988 599999
Q ss_pred EEecCCccCCCCCceEEEEe-CC-eEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEec
Q psy12425 325 SWLKGSREITPSARHHIFAE-GD-TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIMT 384 (591)
Q Consensus 325 ~W~~~~~~~~~~~~~~~~~~-~~-~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~~ 384 (591)
.|++++..+.......+..+ .+ ...+.+..++.+|.|.|+|.|.|..|.....+.|.|..
T Consensus 152 ~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 152 QWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp EEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred EEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 99986554433332222222 22 23445667888999999999999999988888877754
No 443
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=9.5e-15 Score=113.33 Aligned_cols=119 Identities=23% Similarity=0.295 Sum_probs=89.3
Q ss_pred EEEEcCCCccceEE-EEEe---cCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCC--ceE-Eece
Q psy12425 461 VVAENDLGMDSAIV-KIQI---SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMS--SWI-RVGN 533 (591)
Q Consensus 461 c~a~n~~g~~~~~~-~~~v---~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~--~~~-~~~~ 533 (591)
+.|.|..|.+..+. .+.+ ...|.+|.++.+...+.+++.|+|++|...++ .+.+|+|+|+..... .|. ....
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~ 81 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IILAYQITHRLNTTTANTATVEVLA 81 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCCCCCCCCEEEEECSSEEEEECCCCSCCCS-CCCEEEEEEEESSCCCSCCCEEEEC
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCCCCCCceEEEecCCCEEEEEEcCCCCCCC-ceEEEEEEEEECCCCCceEEEEEeC
Confidence 45678887764332 1222 35688999999999999999999998874444 789999999876543 232 2344
Q ss_pred eeeeEEEEcCcccCceEEEEEEEEcCCcCCCCCCCcceEEeccccccC
Q psy12425 534 TRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTYGELLSG 581 (591)
Q Consensus 534 ~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~~~~s~~~~~~~t~~~~p~~ 581 (591)
.....+.|.+|.|++.|.|+|+|.|..|.|++|.... ++|...+|+.
T Consensus 82 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~-~~T~~~~pp~ 128 (130)
T 1wfo_A 82 PSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALV-VTTEKRSGPS 128 (130)
T ss_dssp TTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEE-ECCSSCCCCC
T ss_pred CCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEE-EecCCCCCCC
Confidence 5567999999999999999999999999999988754 4565555544
No 444
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.52 E-value=3.7e-13 Score=117.28 Aligned_cols=175 Identities=15% Similarity=0.210 Sum_probs=108.2
Q ss_pred ccccceeccccEEEEEEEcC--CCCCeeEEecCCccC-------------------CCCCceEEEEe--CCeEEEEEcce
Q psy12425 299 LRNANAIQNHNAQFQCTITG--CPKPTISWLKGSREI-------------------TPSARHHIFAE--GDTYTLIINSV 355 (591)
Q Consensus 299 ~~~~~~~~g~~~~l~c~~~~--~p~~~v~W~~~~~~~-------------------~~~~~~~~~~~--~~~~~l~i~~~ 355 (591)
+..+.+.+|+.+.|.|.+.+ .+...+.|++..... ....++.+..+ ....+|.|.++
T Consensus 6 ~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 85 (248)
T 3u2s_H 6 SGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSL 85 (248)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 34566889999999999976 345689998732110 01245555443 35678999999
Q ss_pred ecccceEEEEEEEeCC----------------------cceeeeeEEEEec----CCcccCCCCcccceeecCCCeEEEE
Q psy12425 356 YGVDADEYVCRAVNKG----------------------GVKSTKAELIIMT----APKFNVPPRFRDTAYFDKGENVVVK 409 (591)
Q Consensus 356 ~~~d~g~y~c~a~n~~----------------------g~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~ 409 (591)
+.+|+|.|.|.+.+.. ........+.|.. +|.+...+ ....+..|+.+.|.
T Consensus 86 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~---~~~~~~~g~~~~L~ 162 (248)
T 3u2s_H 86 RVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLA---PSSKSTSGGTAALG 162 (248)
T ss_dssp CGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEEC---CC------CEEEEE
T ss_pred CHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeC---CCccccCCCcEEEE
Confidence 9999999999998742 1122335566652 22222111 11223468999999
Q ss_pred Eeeecc-C-CCeEEEeeCCeEeeeccceEEEecC----CeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEE
Q psy12425 410 IPFTGY-P-KPKITWYRDNEVIESGGHFHVETSE----RHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQ 477 (591)
Q Consensus 410 c~~~~~-p-~~~v~W~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~ 477 (591)
|.+.+. | .+.+.|++++..+...........+ ..+.|+|.....++ |.|+|.|.|..+.......+.
T Consensus 163 C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 235 (248)
T 3u2s_H 163 CLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 235 (248)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECC
T ss_pred EEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEc
Confidence 999874 4 4579999988643211111111111 13568888888888 999999999977655544443
No 445
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.51 E-value=1.6e-13 Score=99.11 Aligned_cols=89 Identities=21% Similarity=0.403 Sum_probs=74.8
Q ss_pred CCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCC--ccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 292 APEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGS--REITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 292 ~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+... ..+........|.|.++..+|+|.|+|.|.|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE--LLVDAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT--SEEEEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc--EEEEecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 566766667788999999999999999999999999998 776544 3334455667899999999999999999999
Q ss_pred CCcceeeeeEEEE
Q psy12425 370 KGGVKSTKAELII 382 (591)
Q Consensus 370 ~~g~~~~~~~l~v 382 (591)
..|.....+.|.|
T Consensus 80 ~~G~~~~~~~l~V 92 (93)
T 1wit_A 80 ELGEDEAIFEVIV 92 (93)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEE
Confidence 9998887777766
No 446
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.51 E-value=5.3e-13 Score=117.55 Aligned_cols=164 Identities=13% Similarity=0.148 Sum_probs=106.2
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECC--E---E----------eecCCceeEE--EeCCeEEEEEcccCCCCce
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG--R---V----------VQSDDRFKFT--VLDDYIIIFIKEIRKEDAG 64 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~--~---~----------~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g 64 (591)
|..+.+.+|++++|.|.+.+.|.+.+.|+|.. . . .....|+.+. ......+|.|.+++++|+|
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG 89 (256)
T 3tf7_C 10 DARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSA 89 (256)
T ss_dssp CSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCS
T ss_pred CceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCE
Confidence 67899999999999999999999999999832 1 1 1123455543 2345678999999999999
Q ss_pred EEEEEEEcCCee----eEEEEEEEEecC-----------------CCCCC---CCcceEEecCceEEEEecCCCCCCCcc
Q psy12425 65 DYTVNLSNSSGS----VSGTFTINITGL-----------------PGPPI---GPLDVSEITKHTCTLHWNPPKYDGGLK 120 (591)
Q Consensus 65 ~Y~c~~~n~~g~----~~~~~~l~v~~~-----------------p~~p~---~~~~~~~~~~~~~~l~w~~p~~~~~~~ 120 (591)
.|.|.+.|..+. ....+.|.|... +.+|. .|..+....+..++|.|..... ...
T Consensus 90 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~--~~~ 167 (256)
T 3tf7_C 90 VYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS--HNY 167 (256)
T ss_dssp EEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC--CSE
T ss_pred EEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC--ceE
Confidence 999999987642 223356777651 11221 2333445578899999975431 223
Q ss_pred eeeEEEEEEecCCC--------------------ceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCC
Q psy12425 121 VTHYVVERRDISMP--------------------HWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENG 170 (591)
Q Consensus 121 ~~~y~~~~~~~~~~--------------------~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g 170 (591)
+.||+ ...... .+...........+.|.++...+.+.|.|.|.|..|
T Consensus 168 v~W~k---~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g 234 (256)
T 3tf7_C 168 MYWYR---QDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPG 234 (256)
T ss_dssp EEEEE---ECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETT
T ss_pred EEEEE---ECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCC
Confidence 33332 111111 011000122345799999999999999999998755
No 447
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.51 E-value=1.7e-14 Score=106.07 Aligned_cols=87 Identities=24% Similarity=0.285 Sum_probs=71.1
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEe--ceeeeeEEEEcCcccCceEEEEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV--GNTRFTTMAITGLSPGHQYEFRVYAE 557 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~~l~~~~~Y~~~v~A~ 557 (591)
.+|++|..+.+. .+.+++.|+|.+ .+|||++|++|.|+|+......|... .......++|.+|.|++.|+|+|.|.
T Consensus 7 ~~P~pP~~~~~~-~~~~sv~L~W~p-~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~ 84 (114)
T 2kbg_A 7 REPSPPSIHGQP-SSGKSFKLSITK-QDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAA 84 (114)
T ss_dssp CCCCSCCEECCB-CSTTCEEEEECC-CCCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEE
T ss_pred CCccCCcccccc-cCCCEEEEEEEC-CCCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEE
Confidence 367777665544 688999999995 46899999999999998766666433 34455789999999999999999999
Q ss_pred cCCcCCCCCCC
Q psy12425 558 NVYGRSDPSTT 568 (591)
Q Consensus 558 n~~G~~~~s~~ 568 (591)
|.+|.|.+|..
T Consensus 85 N~~G~s~pS~~ 95 (114)
T 2kbg_A 85 NRLGYSEPTVY 95 (114)
T ss_dssp CTTSCEEEEEE
T ss_pred eCCcCcCCcCC
Confidence 99999998864
No 448
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=1.3e-13 Score=101.31 Aligned_cols=80 Identities=16% Similarity=0.280 Sum_probs=67.7
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecC-CceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSD-DRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|+.+.+.+|+++.|.|.+ +.|.+.+.|+|+|..+..+ .++.+...+...+|.|.+++.+|+|.|+|.|.+ ...+
T Consensus 23 ~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~ 97 (104)
T 1pd6_A 23 EPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGG----EKCS 97 (104)
T ss_dssp CSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETT----EEEC
T ss_pred CCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEECC----CcEE
Confidence 455889999999999999 7889999999999999887 788888778788999999999999999999943 3344
Q ss_pred EEEEEe
Q psy12425 81 FTINIT 86 (591)
Q Consensus 81 ~~l~v~ 86 (591)
..|.|.
T Consensus 98 ~~l~V~ 103 (104)
T 1pd6_A 98 TELFVK 103 (104)
T ss_dssp CEEEEE
T ss_pred EEEEEe
Confidence 555553
No 449
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=1.5e-14 Score=106.40 Aligned_cols=83 Identities=18% Similarity=0.268 Sum_probs=70.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCC----ceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeee
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDD----RFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV 77 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~ 77 (591)
|.++.+.+|+++.|.|.+.+.| +.+.|+|||..+.... ++.+...+....|.|.+++.+|+|.|+|.|.| .
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~ 89 (101)
T 2edk_A 15 LEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG----G 89 (101)
T ss_dssp CCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS----C
T ss_pred CCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC----C
Confidence 5678899999999999999888 9999999999998776 66787777778999999999999999999987 2
Q ss_pred EEEEEEEEecCC
Q psy12425 78 SGTFTINITGLP 89 (591)
Q Consensus 78 ~~~~~l~v~~~p 89 (591)
...+.|.|..+|
T Consensus 90 ~~~~~l~V~~~P 101 (101)
T 2edk_A 90 QCEAELIVEEKQ 101 (101)
T ss_dssp EECCBEEEECCC
T ss_pred cEEEEEEEeCCC
Confidence 344667776544
No 450
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.51 E-value=6.3e-13 Score=115.01 Aligned_cols=155 Identities=12% Similarity=0.112 Sum_probs=104.2
Q ss_pred eeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeee--EEEEEE
Q psy12425 6 YIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSV--SGTFTI 83 (591)
Q Consensus 6 ~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~--~~~~~l 83 (591)
.|.+|++|+|.|.+.+ +...+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.+.|..+.. +..+.|
T Consensus 17 ~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L 94 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDL 94 (242)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEE
T ss_pred ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEE
Confidence 6899999999999974 4678999999987642111 00112245689999999999999999998875543 445788
Q ss_pred EEecCCCCCCCC--cceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEEE
Q psy12425 84 NITGLPGPPIGP--LDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYLF 161 (591)
Q Consensus 84 ~v~~~p~~p~~~--~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~ 161 (591)
.|......|... .......+..++|.|.... . ...|.+.+.. ...............|.|.++...+.+.|
T Consensus 95 ~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~---~--~~~~~w~k~g--~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y 167 (242)
T 1p6f_A 95 VVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDT---A--TSMFLLLKEG--RSSHVQRGYGKVQAEFPLGPVTTAHRGTY 167 (242)
T ss_dssp EEECCSCCCEEEEESCSEEETTCEEEEEEECTT---S--CSEEEEEECS--SSCEEEEEECSSEEEEEEEECCGGGCEEE
T ss_pred EeecccCCCceEccCCCccCCCCcEEEEEecCC---C--CCEEEEEECC--CccCccccCCCceEEEEeCCCccccCEEE
Confidence 887643333210 0123457889999998643 1 1234443322 11111122234567899999999999999
Q ss_pred EEEEEccC
Q psy12425 162 HVMAVNEN 169 (591)
Q Consensus 162 ~~~a~n~~ 169 (591)
+|.|.|..
T Consensus 168 ~C~a~n~~ 175 (242)
T 1p6f_A 168 RCFGSYNN 175 (242)
T ss_dssp EEEEEEET
T ss_pred EEEEECCC
Confidence 99999864
No 451
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.51 E-value=2.1e-12 Score=115.43 Aligned_cols=137 Identities=12% Similarity=0.195 Sum_probs=95.8
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCC--CCCCcceEEEcCCCc----------cCCCeEEeeccccceeccccEEEE
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSL--PSSASNSVQIKDPMA----------AKAPEIIVPLRNANAIQNHNAQFQ 313 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~--~s~~~~~~~~~~~~~----------~~~p~~~~~~~~~~~~~g~~~~l~ 313 (591)
...|.|.+++..|.|.|.|.+.|..|... .......+.+..... ..++.+...+....+.+|+.+.|.
T Consensus 104 ~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~ 183 (282)
T 1qok_A 104 TAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTIT 183 (282)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEE
T ss_pred eEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEE
Confidence 35799999999999999999999866211 011223455543211 124555666667778999999999
Q ss_pred EEEcCCCCCeeEEec--CCccCC------------CCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eeee
Q psy12425 314 CTITGCPKPTISWLK--GSREIT------------PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKA 378 (591)
Q Consensus 314 c~~~~~p~~~v~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~ 378 (591)
|.+.+.+ +.+.|++ ++..+. ...++.+...+...+|.|.++..+|+|.|+|.|.|..+.. ....
T Consensus 184 C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt 262 (282)
T 1qok_A 184 CSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGT 262 (282)
T ss_dssp EEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCE
T ss_pred EEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCE
Confidence 9999998 8999999 454331 1345665556677899999999999999999998854322 3345
Q ss_pred EEEEe
Q psy12425 379 ELIIM 383 (591)
Q Consensus 379 ~l~v~ 383 (591)
.|.|.
T Consensus 263 ~l~V~ 267 (282)
T 1qok_A 263 KLELK 267 (282)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 55554
No 452
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.51 E-value=5.6e-14 Score=104.37 Aligned_cols=83 Identities=20% Similarity=0.285 Sum_probs=71.9
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+.+.|.+ +.|+|+|..+....++.+...+....|.|.+++.+|+|.|+|.|.|. ..+..+
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~--~~~~~~ 91 (106)
T 2dlt_A 15 IADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY--ALSLSA 91 (106)
T ss_dssp CCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS--CCCCCB
T ss_pred CCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC--CceEEE
Confidence 567899999999999999988877 99999999998888888888888889999999999999999999998 334445
Q ss_pred EEEEec
Q psy12425 82 TINITG 87 (591)
Q Consensus 82 ~l~v~~ 87 (591)
.|.|..
T Consensus 92 ~l~V~~ 97 (106)
T 2dlt_A 92 KLNFLE 97 (106)
T ss_dssp CEEEEC
T ss_pred EEEEEE
Confidence 555553
No 453
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.50 E-value=2.1e-13 Score=100.69 Aligned_cols=91 Identities=19% Similarity=0.197 Sum_probs=72.4
Q ss_pred CCCCCCCCCeeeeecCCeeEEEe--eccccCCCcceeeEEEEeeeC-CCCceEEeceeeeeEEEEcCcccCceEEEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVW--RAPIWDGGSNITNYIVEKREH-PMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYA 556 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W--~~p~~~~~~~~~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A 556 (591)
+.|.+|.++++..++.+++.|+| .+|...+| . .+|.|.|+.. ....|... . ..++|.+|.|++.|.|+|+|
T Consensus 8 ~~P~~p~~l~~~~~~~~sv~l~W~~~~P~~~ng-~-~~Y~v~y~~~~~~~~~~~~-~---~~~~i~~L~p~t~Y~f~V~A 81 (107)
T 1x5a_A 8 AESLSGLSLKLVKKEPRQLELTWAGSRPRNPGG-N-LSYELHVLNQDEEWHQMVL-E---PRVLLTKLQPDTTYIVRVRT 81 (107)
T ss_dssp CCCCCSCCCCEEEEETTEEEEECCCCCSSCCSS-C-CEEEEEEECSSCEEEEEES-S---SEEEEESCCSSCEEEEEEEE
T ss_pred CCCCCCCceEEEecCCCEEEEEECCCCCCCCCC-c-eEEEEEEEeCCCCceEEEe-c---ceEEECCCCCCCEEEEEEEE
Confidence 57889999999999999999999 88876666 4 9999999865 22222222 1 12999999999999999999
Q ss_pred EcCCcCCCCCCCcceEEecc
Q psy12425 557 ENVYGRSDPSTTSDLITTYG 576 (591)
Q Consensus 557 ~n~~G~~~~s~~~~~~~t~~ 576 (591)
.|.+|.|++|..+.+.|.++
T Consensus 82 ~~~~G~g~~S~~~~~~T~~~ 101 (107)
T 1x5a_A 82 LTPLGPGPFSPDHEFRTSPP 101 (107)
T ss_dssp ECSSSCCCCCCCEEEECCCC
T ss_pred ECCCccCCCCCCEEEEECCC
Confidence 99999999999876544443
No 454
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.50 E-value=3e-13 Score=99.31 Aligned_cols=83 Identities=17% Similarity=0.476 Sum_probs=69.8
Q ss_pred cCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEE--ec---CCeeEEEEeccCCCcceeEEEEEEcCCCccceEEE
Q psy12425 401 DKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVE--TS---ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVK 475 (591)
Q Consensus 401 ~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~---~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~ 475 (591)
..+..+.|.|.+.|.|.|.+.|+++|..+......... .. .....|.|.++..+|+|.|+|.|.|..|..+.++.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 45788999999999999999999999998766543222 11 12456999999999999999999999999999999
Q ss_pred EEecCCCC
Q psy12425 476 IQISDRPD 483 (591)
Q Consensus 476 ~~v~~~p~ 483 (591)
|.|..+|.
T Consensus 94 l~V~~~P~ 101 (103)
T 1wwb_X 94 AHFMGWPG 101 (103)
T ss_dssp ECCSCCCC
T ss_pred EEECCCCC
Confidence 99988775
No 455
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.50 E-value=3.5e-13 Score=110.59 Aligned_cols=148 Identities=13% Similarity=0.088 Sum_probs=102.9
Q ss_pred CceeeeecCCeEEEEEEeccCC-CceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQ-PMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|..+.+.+|+++.|.|.+.+.| .+.+.|+|+|..+..... .+.|.+++.+|+|.|+|.+.|..+ +..
T Consensus 11 p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~~~~--s~~ 78 (170)
T 3ry4_A 11 PPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQTSL--SDP 78 (170)
T ss_dssp SCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETTSBC--CCC
T ss_pred CCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeCCCc--eEe
Confidence 4556799999999999999886 679999999998866532 356778999999999999997543 345
Q ss_pred EEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceEEEcCCcCCcEEE
Q psy12425 81 FTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTFIVQGLTEGQEYL 160 (591)
Q Consensus 81 ~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 160 (591)
+.|.|...|.....+ ......+..+.|.|.... +.+...+.+.+ .+ ..+........+.|..+...+.+.
T Consensus 79 ~~l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~---~~p~~~~~W~~--~g----~~~~~~~~~~~L~i~~v~~~d~G~ 148 (170)
T 3ry4_A 79 VHLTVLFEWLVLQTP-HLEFQEGETIMLRCHSWK---DKPLVKVTFFQ--NG----KSQKFSHLDPTFSIPQANHSHSGD 148 (170)
T ss_dssp EEEEEECCSEEEECS-CSEECTTCCEEEEEEEGG---GCCEEEEEEEE--TT----EEEEEESSCCEEEESSCCGGGCEE
T ss_pred EEEEEECCceEecCC-CceeecCCeEEEEEECCC---CCCCceEEEEE--CC----eEccccCCCCeEEEEeccccCCEE
Confidence 677777644221111 233446778999997532 22222333322 11 112223356789999999999999
Q ss_pred EEEEEEccCCC
Q psy12425 161 FHVMAVNENGM 171 (591)
Q Consensus 161 ~~~~a~n~~g~ 171 (591)
|+|.|.|..|.
T Consensus 149 Y~C~a~n~~g~ 159 (170)
T 3ry4_A 149 YHCTGNIGYTL 159 (170)
T ss_dssp EEEEEEETTEE
T ss_pred EEEEEEeCcCc
Confidence 99999998764
No 456
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.50 E-value=1.1e-13 Score=104.24 Aligned_cols=96 Identities=15% Similarity=0.163 Sum_probs=76.1
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeecccc-CCCcceeeEEEEeeeCCCC---ceE-EeceeeeeEEEEcCcccCceEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIW-DGGSNITNYIVEKREHPMS---SWI-RVGNTRFTTMAITGLSPGHQYEFRV 554 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~-~~~~~~~~y~v~~~~~~~~---~~~-~~~~~~~~~~~i~~l~~~~~Y~~~v 554 (591)
.+|.+|.++.+..++.+++.|+|++|.. ..+..|.+|.|+|+..... .|. .........++|.+|.|++.|.|+|
T Consensus 7 ~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 86 (114)
T 1x4y_A 7 GPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKM 86 (114)
T ss_dssp SCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEEEE
Confidence 4667888889999999999999998852 4556899999999866543 332 2233344689999999999999999
Q ss_pred EEEcCCcCCCCCCCcceEEecc
Q psy12425 555 YAENVYGRSDPSTTSDLITTYG 576 (591)
Q Consensus 555 ~A~n~~G~~~~s~~~~~~~t~~ 576 (591)
+|.|..|.|++|....+ +|.+
T Consensus 87 ~A~n~~G~g~~S~~v~~-~T~~ 107 (114)
T 1x4y_A 87 QCFNEGGESEFSNVMIC-ETKA 107 (114)
T ss_dssp EEECTTCCCCCCCCEEE-ECCC
T ss_pred EEEcCCccCCCcCCEEE-EeCC
Confidence 99999999999998655 4444
No 457
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.50 E-value=2.3e-14 Score=108.51 Aligned_cols=100 Identities=21% Similarity=0.257 Sum_probs=81.9
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcC
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENV 559 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~ 559 (591)
..|.+|.++.+...+.+++.|+|++|. ++ .+.+|+|+|+......|........+.+.|.+|.+++.|.|+|+|.|.
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~--~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 92 (115)
T 1x5z_A 16 GVPGQPLNFKAEPESETSILLSWTPPR--SD-TIANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSP 92 (115)
T ss_dssp CCCCCCEEEEEECSSSSEEEEEEECCS--CC-CCCEEEECBEESSSCCCBCCEECSSSEEEEECCCTTCEEEECEEEECS
T ss_pred CCCCCCccCEeeeCCCCEEEEEEcCCC--CC-CccEEEEEEEeCCCCCceEEecCCCcEEEECCCCCCCeEEEEEEEECC
Confidence 467888888898889999999999875 23 789999999987766665444445589999999999999999999999
Q ss_pred CcCCCCCCCcceEEeccccccCCC
Q psy12425 560 YGRSDPSTTSDLITTYGELLSGME 583 (591)
Q Consensus 560 ~G~~~~s~~~~~~~t~~~~p~~~~ 583 (591)
.|.|.+|.... ++|...+|+.|+
T Consensus 93 ~G~g~~S~~~~-~~T~~~~P~~pp 115 (115)
T 1x5z_A 93 QGLGASTAEIS-ARTMQSSGPSSG 115 (115)
T ss_dssp SCEEEECCCEE-EECCCCCCCCCC
T ss_pred CcccCCCcCEE-EecCCCCCCCCC
Confidence 99999998765 466666666653
No 458
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=9.6e-14 Score=104.43 Aligned_cols=96 Identities=18% Similarity=0.178 Sum_probs=76.2
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcC
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENV 559 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~ 559 (591)
..|.+|.++++...+ +++.|+|++|...+ +.|.+|+|+|+......+........+.++|.+|.+++.|.|+|+|.|.
T Consensus 16 ~~P~~P~~l~~~~~~-~sv~l~W~~P~~~n-g~i~gY~i~y~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~ 93 (116)
T 2edb_A 16 QVPDQPSSLHVRPQT-NCIIMSWTPPLNPN-IVVRGYIIGYGVGSPYAETVRVDSKQRYYSIERLESSSHYVISLKAFNN 93 (116)
T ss_dssp SCCCCCSCEEEEECS-SCEEEEECCCSCTT-BCCCEEEEEEEESSTTSEEEEEETTCCEEEECSCCSSSBEEEEEEEEET
T ss_pred CCCCCCCCeEEEECC-CEEEEEEcCCCCCC-CceeEEEEEEEeCCCCeEEEEeCCCeeEEEeCCCCCCCEEEEEEEEEeC
Confidence 468899999999888 99999999987654 4799999999865444444445556689999999999999999999999
Q ss_pred CcCCCCCCCcceEEeccccc
Q psy12425 560 YGRSDPSTTSDLITTYGELL 579 (591)
Q Consensus 560 ~G~~~~s~~~~~~~t~~~~p 579 (591)
+|.|+++.. .++|...+|
T Consensus 94 ~G~g~~~~~--~~~T~~~~P 111 (116)
T 2edb_A 94 AGEGVPLYE--SATTRSITS 111 (116)
T ss_dssp TEECSCEEE--CCBCCCSSS
T ss_pred CccCCCCcc--eeecccCCC
Confidence 999987653 234444343
No 459
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.50 E-value=8.2e-13 Score=114.70 Aligned_cols=121 Identities=14% Similarity=0.281 Sum_probs=88.1
Q ss_pred CCceeeecCcccCCcEEEEEEEEcCC-CCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccE-EEEEEE-cCCCC
Q psy12425 245 APSQINIPNLIEGRQYEFRVYAQNEA-GLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNA-QFQCTI-TGCPK 321 (591)
Q Consensus 245 ~~~~~~i~~l~~~~~~~y~c~a~n~~-g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~-~l~c~~-~~~p~ 321 (591)
....|.|.++...|.|.|+|.+.+.. |.. .....+.+.. .+..|.+...+....+.+|+.+ .|.|.+ .+.|.
T Consensus 75 ~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~---~~~~~l~V~~--~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~ 149 (231)
T 2pet_A 75 SQGRLVLAEAQVGDERDYVCVVRAGAAGTA---EATARLNVFA--KPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPA 149 (231)
T ss_dssp TTCCEEESSCCGGGCEEEEEEEECGGGCEE---EEEEEEEEEB--CCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSC
T ss_pred CCceEEEcccCcccCceEEEEEEecCCCce---EEEEEEEEEe--cCCCcEEecCCcceeecCCCceEEEEEEeECcccC
Confidence 34559999999999999999999876 322 2333444432 2344777766666777889888 999999 89999
Q ss_pred CeeEEecCCccCCCCC----ceEEEEe-----CC----eEEEEEcceecccceEEEEEEEeC
Q psy12425 322 PTISWLKGSREITPSA----RHHIFAE-----GD----TYTLIINSVYGVDADEYVCRAVNK 370 (591)
Q Consensus 322 ~~v~W~~~~~~~~~~~----~~~~~~~-----~~----~~~l~i~~~~~~d~g~y~c~a~n~ 370 (591)
+.+.|++++..+.... ++.+... .+ ...|.|.....+|.|.|+|.|.|.
T Consensus 150 p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 150 PKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 9999999998887655 4443321 11 146788766666799999999994
No 460
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.50 E-value=1.2e-13 Score=100.29 Aligned_cols=83 Identities=20% Similarity=0.329 Sum_probs=71.3
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|..+.+.+|+++.|.|.+.+ .+.+.|+|+|..+....++.+. + ..|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 8 p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~--~--~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 81 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLI--G--EYLQIKGATPRDSGLYACTAARTVDSETWIF 81 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEE--T--TEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred CCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEe--C--CEEEECcCCcccCEEEEEEEccCCCcEEEEE
Confidence 67889999999999999986 5799999999999877665553 2 3799999999999999999999999988889
Q ss_pred EEEEecCCC
Q psy12425 82 TINITGLPG 90 (591)
Q Consensus 82 ~l~v~~~p~ 90 (591)
.|.|.+++.
T Consensus 82 ~l~V~~~~~ 90 (95)
T 4hwu_A 82 MVNVTDAAE 90 (95)
T ss_dssp EEEECCC--
T ss_pred EEEEeCCcc
Confidence 999987543
No 461
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.50 E-value=9.9e-13 Score=111.12 Aligned_cols=163 Identities=12% Similarity=0.147 Sum_probs=103.7
Q ss_pred eccccceeccccEEEEEEEcCCCCCeeEEecCCc--cCC----------CCCceEEEEe---CCeEEEEEcceecccceE
Q psy12425 298 PLRNANAIQNHNAQFQCTITGCPKPTISWLKGSR--EIT----------PSARHHIFAE---GDTYTLIINSVYGVDADE 362 (591)
Q Consensus 298 ~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~--~~~----------~~~~~~~~~~---~~~~~l~i~~~~~~d~g~ 362 (591)
.+..+.+.+|+.+.|.|.+.+.+ +.+.|++... ... ...++.+..+ ....+|.|.+++.+|+|.
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~ 85 (207)
T 1ypz_E 7 SPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGT 85 (207)
T ss_dssp SCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEE
T ss_pred CCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEE
Confidence 34556788999999999998765 4899988532 110 1245555544 456799999999999999
Q ss_pred EEEEEEeCCc---------c--eeeeeEEEEecCCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeCCeEe
Q psy12425 363 YVCRAVNKGG---------V--KSTKAELIIMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRDNEVI 429 (591)
Q Consensus 363 y~c~a~n~~g---------~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~ 429 (591)
|.|.+.+..+ . ......|.|...+....+|. +.+..+ .+.|.|.+.+. |. +.+.|+++ ..+
T Consensus 86 Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~----v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l 159 (207)
T 1ypz_E 86 YFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPS----VFIMKN-GTNVACLVKDFYPKEVTISLRSS-KKI 159 (207)
T ss_dssp EEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCE----EEEEEE-TTEEEEEEEEESSSCCEEEEECS-SEE
T ss_pred EEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCe----EEEeCC-CCeEEEEEeeEeCCCeEEEEecC-Ccc
Confidence 9999998743 1 12345777765322222222 111111 26899999875 44 79999999 666
Q ss_pred eeccceEEEecCCeeEEEEeccCC-CcceeEEEEEEcCCCc
Q psy12425 430 ESGGHFHVETSERHAILTIRDASN-VDTAPYRVVAENDLGM 469 (591)
Q Consensus 430 ~~~~~~~~~~~~~~~~l~i~~~~~-~~~g~y~c~a~n~~g~ 469 (591)
...... +.... ...+.+..... ++.|.|+|.+.|..+.
T Consensus 160 ~~~~~~-~~~~~-~g~y~~~~~~~~~~~~~ytC~v~~~~~~ 198 (207)
T 1ypz_E 160 VEFDPA-IVISP-SGKYSAVKLGQYGDSNSVTCSVQHNSET 198 (207)
T ss_dssp EECCCE-EEECT-TSSEEEEECEEESSTTTCEEEEEETTEE
T ss_pred cCCccc-eEEcC-CCcEEEEEeecccCCCcEEEEEEECCcc
Confidence 533221 11111 12333333333 6789999999998764
No 462
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.50 E-value=2.6e-13 Score=102.18 Aligned_cols=84 Identities=17% Similarity=0.197 Sum_probs=74.0
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+.+. +.+.|+|++..+..+.++.+...+....|.|.+++.+|+|.|+|.| |.....+
T Consensus 26 ~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~ 99 (113)
T 2edh_A 26 LRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSA 99 (113)
T ss_dssp CCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----TTEEEEE
T ss_pred CCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----CCCCEEE
Confidence 567789999999999999775 6899999999998888998888888889999999999999999999 5667778
Q ss_pred EEEEecCCCC
Q psy12425 82 TINITGLPGP 91 (591)
Q Consensus 82 ~l~v~~~p~~ 91 (591)
.|.|...|..
T Consensus 100 ~l~V~~~p~~ 109 (113)
T 2edh_A 100 MLTVRAMPSG 109 (113)
T ss_dssp EEEECCCCCS
T ss_pred EEEEeCCCCC
Confidence 8999877654
No 463
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.49 E-value=1.5e-13 Score=112.89 Aligned_cols=150 Identities=15% Similarity=0.167 Sum_probs=99.6
Q ss_pred ceeeeecCCeEEEEEEecc--CCCceEEEEECCEEee----------cCCceeEEEeCCeEEEEEcccCCCCceEEEEEE
Q psy12425 3 NALYIPEGDNTKVKIFYAG--DQPMEVSLTKNGRVVQ----------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNL 70 (591)
Q Consensus 3 ~~~~v~~G~~~~l~C~~~~--~p~~~v~W~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~ 70 (591)
..+.+.+|+++.|.|...+ .+.+.|.|+|++..+. ...|+.+ ..+. +|.|.+++.+|+|.|+|.|
T Consensus 4 ~~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~--~~~g-sL~I~~v~~~D~G~Y~C~~ 80 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEI--LANG-DLKIKNLTRDDSGTYNVTV 80 (176)
T ss_dssp EEEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEE--CTTS-CEEESSCCGGGCEEEEEEE
T ss_pred eEEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEE--CCCC-cEEEcccccccCEEEEEEE
Confidence 3578899999999995433 5677999999997653 2344444 2333 4999999999999999999
Q ss_pred EcCCeee--EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEeecCcceE
Q psy12425 71 SNSSGSV--SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTTCHDTTF 148 (591)
Q Consensus 71 ~n~~g~~--~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 148 (591)
.|..|.. +..+.|.|...+..|.. . .....+.|.|...... ...+.+.+ .+ . .+... ..+
T Consensus 81 ~n~~g~~~~~~~~~l~V~~~~~~p~i----~-~~~~~v~L~C~~~g~p----~p~i~W~~--~g--~--~l~~~---~~~ 142 (176)
T 1hng_A 81 YSTNGTRILNKALDLRILEMVSKPMI----Y-WECSNATLTCEVLEGT----DVELKLYQ--GK--E--HLRSL---RQK 142 (176)
T ss_dssp EETTCCEEEEEEEEEEEECCCCCCEE----E-EETTTTEEEEECSSCS----SCEEEEEE--TT--E--EEEEE---SSS
T ss_pred EeCCCCEEEEEEEEEEEeCCCCCCEE----E-ecCCcEEEEEEecCCC----CcEEEEEE--CC--E--ECCCC---CcE
Confidence 9999886 66688888876544331 1 2234588888643311 12222222 11 1 11111 124
Q ss_pred EEcCCcCCcEEEEEEEEEccCCCCC
Q psy12425 149 IVQGLTEGQEYLFHVMAVNENGMGP 173 (591)
Q Consensus 149 ~i~~l~~~~~y~~~~~a~n~~g~~~ 173 (591)
.+..+...+.+.|+|.|.|..|...
T Consensus 143 ~i~~~~~~d~G~Y~C~a~N~~g~~~ 167 (176)
T 1hng_A 143 TMSYQWTNLRAPFKCKAVNRVSQES 167 (176)
T ss_dssp EEEEECSCCSSCEEEEEEETTEEEE
T ss_pred EEEEEEccCCeEEEEEEEecCCCce
Confidence 4456678899999999999888643
No 464
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.8e-13 Score=101.44 Aligned_cols=98 Identities=26% Similarity=0.428 Sum_probs=84.0
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCC-CCceEEEEe-CCeEEEEEcceecccceEEEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-SARHHIFAE-GDTYTLIINSVYGVDADEYVCRA 367 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~c~a 367 (591)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+... .+...|.|.++..+|+|.|+|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 3577777777788899999999999999999999999999988875 456666554 34568999999999999999999
Q ss_pred EeCCcceeeeeEEEEecCCc
Q psy12425 368 VNKGGVKSTKAELIIMTAPK 387 (591)
Q Consensus 368 ~n~~g~~~~~~~l~v~~~p~ 387 (591)
.|..|.....+.|.|..+|.
T Consensus 86 ~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp ECTTCCEEECCCEEEECCSC
T ss_pred EECCCeEEEEEEEEEECCCC
Confidence 99999998889999987664
No 465
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.49 E-value=1.2e-13 Score=103.66 Aligned_cols=94 Identities=24% Similarity=0.344 Sum_probs=76.0
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCC--CceEEeceeeeeEEEEcCcccCceEEEEEEEE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPM--SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAE 557 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~--~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~ 557 (591)
++|.+|.++.+...+.+++.|+|++|...+ +.+.+|+|+|+..+. ..|.. .......+.|.+|.|++.|.|+|+|.
T Consensus 9 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~-g~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~ 86 (111)
T 1x5l_A 9 AAPSQVVVIRQERAGQTSVSLLWQEPEQPN-GIILEYEIKYYEKDKEMQSYST-LKAVTTRATVSGLKPGTRYVFQVRAR 86 (111)
T ss_dssp CCCCCCCCEECSCBCSSCEEEEECCCSCCC-SCCCEEEEEEEESSSCCSSCEE-EEESSSEEEECSCCTTCEEEECEEEE
T ss_pred CCCCCCceEEEEEcCCCEEEEEECCCCCCC-CEEEEEEEEEEECCCCceeEEE-ecCCCCEEEEcCCCCCCEEEEEEEEE
Confidence 568888888888889999999999886444 479999999987653 23333 34456799999999999999999999
Q ss_pred cCCcCCCCCCCcceEEec
Q psy12425 558 NVYGRSDPSTTSDLITTY 575 (591)
Q Consensus 558 n~~G~~~~s~~~~~~~t~ 575 (591)
|..|.|++|....+.|.+
T Consensus 87 n~~G~g~~S~~~~~~T~~ 104 (111)
T 1x5l_A 87 TSAGCGRFSQAMEVETGK 104 (111)
T ss_dssp ETTEECCCCCCEEEECCC
T ss_pred eCCcCCCCcccEEEEcCC
Confidence 999999999987654443
No 466
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.49 E-value=3.2e-12 Score=112.60 Aligned_cols=126 Identities=14% Similarity=0.173 Sum_probs=91.3
Q ss_pred ceeeecCcccCCcEEEEEEEEcCCC---------CCCCCCCcceEEEcCCCcc----------CCCeEEeeccccceecc
Q psy12425 247 SQINIPNLIEGRQYEFRVYAQNEAG---------LSLPSSASNSVQIKDPMAA----------KAPEIIVPLRNANAIQN 307 (591)
Q Consensus 247 ~~~~i~~l~~~~~~~y~c~a~n~~g---------~~~~s~~~~~~~~~~~~~~----------~~p~~~~~~~~~~~~~g 307 (591)
..|.|.+++..|.|.|.|.+.|... ..........+.+...... .+|.+...+....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 4699999999999999999988611 0111122344555533211 14567777778889999
Q ss_pred ccEEEEEEEcCCCC-CeeEEecC--CccCC------------CCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCc
Q psy12425 308 HNAQFQCTITGCPK-PTISWLKG--SREIT------------PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGG 372 (591)
Q Consensus 308 ~~~~l~c~~~~~p~-~~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g 372 (591)
+.+.|.|.+.+.+. +.+.|++. +.... ...++.+..++...+|.|.+++.+|+|.|+|.|.|..+
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 99999999999876 89999883 22211 23456666677778999999999999999999988543
No 467
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.49 E-value=2.4e-12 Score=113.13 Aligned_cols=163 Identities=11% Similarity=0.059 Sum_probs=105.9
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECC-----EEe---------ecCCceeEEEeCCeEEEEEcccCCCCceEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG-----RVV---------QSDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 67 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~-----~~~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 67 (591)
|..+.+.+|++++|.|.+.+.|.+.+.|+|+. ..+ ....++.+...+...+|.|.+++.+|+|.|.
T Consensus 11 p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 90 (250)
T 3esu_F 11 TSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYF 90 (250)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEE
Confidence 67889999999999999999999999999953 111 1135666666667789999999999999999
Q ss_pred EEEEcCCeee-EEEEEEEEecCCC-------------------CCCCCcceEEecCceEEEEecCCCCCC-CcceeeEEE
Q psy12425 68 VNLSNSSGSV-SGTFTINITGLPG-------------------PPIGPLDVSEITKHTCTLHWNPPKYDG-GLKVTHYVV 126 (591)
Q Consensus 68 c~~~n~~g~~-~~~~~l~v~~~p~-------------------~p~~~~~~~~~~~~~~~l~w~~p~~~~-~~~~~~y~~ 126 (591)
|.+.|..+.. .....|.|...|. ....+.......+..++|.|....... ...+.||+
T Consensus 91 C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k- 169 (250)
T 3esu_F 91 CQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVK- 169 (250)
T ss_dssp EEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEE-
T ss_pred EEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEE-
Confidence 9999876543 2335666665321 111122344567888999998533110 11233332
Q ss_pred EEEecCC----------------------CceEEEEe-ecCcceEEEcCCcCCcEEEEEEEEEc
Q psy12425 127 ERRDISM----------------------PHWICIST-TCHDTTFIVQGLTEGQEYLFHVMAVN 167 (591)
Q Consensus 127 ~~~~~~~----------------------~~~~~~~~-~~~~~~~~i~~l~~~~~y~~~~~a~n 167 (591)
...+. ..+..... ......+.|.++...+.+.|.|.+.+
T Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 170 --QRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp --ECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred --ECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 21111 11111111 12334699999999999999999986
No 468
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.49 E-value=6.6e-14 Score=107.15 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=71.3
Q ss_pred CCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCC
Q psy12425 481 RPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVY 560 (591)
Q Consensus 481 ~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~ 560 (591)
.|.+|.++++...+ +++.|+|++|...+ +.+.+|.|+|+......+........+.++|.+|.|++.|.|+|+|.|.+
T Consensus 27 ~P~~P~~l~~~~~~-~sv~l~W~~P~~~~-g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 104 (126)
T 1x5i_A 27 VPEVPSSLHVRPLV-TSIVVSWTPPENQN-IVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNV 104 (126)
T ss_dssp CCCSCSEEEEEEET-TEEEEEEECCSCTT-BCCCEEEEEECSSCGGGEEEECCTTCCEEEECSCCSSCEECCEEEEECSS
T ss_pred CCCCCCeeEEEecC-CEEEEEEcCCCCCC-CCEeEEEEEEEcCCCCceEEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCC
Confidence 68889999998887 99999999987544 47999999998533233333345566899999999999999999999999
Q ss_pred cCCCCCCCc
Q psy12425 561 GRSDPSTTS 569 (591)
Q Consensus 561 G~~~~s~~~ 569 (591)
|.|+++...
T Consensus 105 G~g~~s~~~ 113 (126)
T 1x5i_A 105 GEGIPLYES 113 (126)
T ss_dssp CBCCCCCCC
T ss_pred ccCcceeeE
Confidence 999998753
No 469
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=4.4e-13 Score=101.02 Aligned_cols=84 Identities=20% Similarity=0.256 Sum_probs=73.5
Q ss_pred eeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEEEEE
Q psy12425 5 LYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTFTIN 84 (591)
Q Consensus 5 ~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~~l~ 84 (591)
+.+.+|+++.|.|.+. .|.+.+.|+|+|+.+..+.++.+...+...+|.|.+++.+|+|.|+|.|.| ....+.|.
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~ 97 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD----ESASFTVT 97 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS----CEEEEEEE
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec----CcEEEEEE
Confidence 6788999999999995 888999999999999888888888777778999999999999999999988 45678888
Q ss_pred EecCCCCCC
Q psy12425 85 ITGLPGPPI 93 (591)
Q Consensus 85 v~~~p~~p~ 93 (591)
|..+|....
T Consensus 98 V~~~p~~~~ 106 (113)
T 2cpc_A 98 VTEPPVRII 106 (113)
T ss_dssp EECCCCCCC
T ss_pred EecCCchhc
Confidence 888775433
No 470
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.49 E-value=1e-13 Score=102.39 Aligned_cols=84 Identities=18% Similarity=0.382 Sum_probs=74.2
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEEeCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTVLDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGTF 81 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~~ 81 (591)
|.++.+.+|+++.|.|.+.+.|.+ +.|+|++..+..+.++.+...+...+|.|.+++.+|+|.|+|. .|.....+
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~ 89 (103)
T 2e7b_A 15 LKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS----FGDQTTSA 89 (103)
T ss_dssp CCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----CSSCBCCB
T ss_pred CccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----ECCcEEEE
Confidence 567899999999999999999888 9999999999888888888888888999999999999999998 45566678
Q ss_pred EEEEecCCC
Q psy12425 82 TINITGLPG 90 (591)
Q Consensus 82 ~l~v~~~p~ 90 (591)
.|.|...|.
T Consensus 90 ~l~V~~~p~ 98 (103)
T 2e7b_A 90 TLTVTALPS 98 (103)
T ss_dssp CEEEECCCC
T ss_pred EEEEEeccc
Confidence 888887664
No 471
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.49 E-value=2.1e-13 Score=119.76 Aligned_cols=174 Identities=11% Similarity=0.217 Sum_probs=110.5
Q ss_pred EEeeccccceeccccEEEEEEEcCCCCCeeEEecCCcc--C---------------CCCCceEEEE-eCCeEEEEEccee
Q psy12425 295 IIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSRE--I---------------TPSARHHIFA-EGDTYTLIINSVY 356 (591)
Q Consensus 295 ~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~--~---------------~~~~~~~~~~-~~~~~~l~i~~~~ 356 (591)
+...+..+.+.+|+.+.|.|.+. .+.+.+.|++.... . ....++.+.. .....+|.|.+++
T Consensus 6 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 84 (252)
T 1oga_E 6 ITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQ 84 (252)
T ss_dssp EECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCC
T ss_pred ceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCC
Confidence 34444567789999999999985 45789999885311 0 0123444432 1334589999999
Q ss_pred cccceEEEEEEEeCC---cceeeeeEEEEec------CCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeC
Q psy12425 357 GVDADEYVCRAVNKG---GVKSTKAELIIMT------APKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRD 425 (591)
Q Consensus 357 ~~d~g~y~c~a~n~~---g~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~ 425 (591)
.+|+|.|.|.+.+.. ........|.|.. +|.+...+ .....+..|+.+.|.|.+.|. |. +.+.|+++
T Consensus 85 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~--~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~ 162 (252)
T 1oga_E 85 KNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFE--PSEAEISHTQKATLVCLATGFYPDHVELSWWVN 162 (252)
T ss_dssp SCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEEC--CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEEC--CChhhhccCCceEEEEEEeeEcCCCcEEEEEEC
Confidence 999999999999862 1112334566654 23222110 011123468999999999985 65 49999999
Q ss_pred CeEeeeccceE---E---E-ecCC----eeEEEEeccCCC-cceeEEEEEEcCCCccc
Q psy12425 426 NEVIESGGHFH---V---E-TSER----HAILTIRDASNV-DTAPYRVVAENDLGMDS 471 (591)
Q Consensus 426 ~~~~~~~~~~~---~---~-~~~~----~~~l~i~~~~~~-~~g~y~c~a~n~~g~~~ 471 (591)
|..+..+.... . . ..+. .+.|.|...... +.+.|+|.|.|......
T Consensus 163 g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 163 GKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp TEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 98876433211 0 0 0111 234677666543 57889999999876544
No 472
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.49 E-value=2.1e-12 Score=109.70 Aligned_cols=177 Identities=20% Similarity=0.210 Sum_probs=124.1
Q ss_pred CCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEee--cCcceEEE--cCCcCCcEEEEEE
Q psy12425 88 LPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT--CHDTTFIV--QGLTEGQEYLFHV 163 (591)
Q Consensus 88 ~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~--~~~~~~~i--~~l~~~~~y~~~~ 163 (591)
+|++|.+ +........++.++|.++... +. ...|.+.++......|..+... .....+.+ .+|.+...|.|+|
T Consensus 3 pP~~P~n-l~c~~~~~~~~~c~W~p~~~~-~~-~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V 79 (210)
T 3n06_B 3 PPGKPEI-FKCRSPNKETFTCWWRPGTDG-GL-PTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMV 79 (210)
T ss_dssp CCCCCEE-EEEEBSSSSCEEEEEECCSSS-CC-CSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEE
T ss_pred CCCCCeE-eEEEeCCCCeEEEEECCCCCC-CC-CceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEE
Confidence 4555554 455666778999999987743 33 4689999988766677765421 12234444 5688999999999
Q ss_pred EEEccCCCCCCCCccCcccccCCCCCCCCCCCCeEEeec----CCeEEEEEecCCCCC---CcceEEEEEEeeecCCCcc
Q psy12425 164 MAVNENGMGPPLEGINPIKAKSPYDKPSPPGIPVVTQVG----GDFVNLSWDKPLDDG---GSRIQGYWIDKHEVGSDAW 236 (591)
Q Consensus 164 ~a~n~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~v~l~w~~~~~~~---~~~~~~y~~~~~~~~~~~~ 236 (591)
.|.|..|.+...... +. ......|.+|..+.+.... ..++.|+|..|.... +.....|.|.++..+...|
T Consensus 80 ~A~N~~G~~~s~~~~--~~-~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~ 156 (210)
T 3n06_B 80 NATNQMGSSFSDELY--VD-VTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEW 156 (210)
T ss_dssp EEEETTEEEECCCEE--EC-GGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSC
T ss_pred EEEcCCCCeeCCcEE--Ec-hhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCC
Confidence 999999876432211 11 1112356777766666543 478999999986543 2246899999998877778
Q ss_pred EEEEeeecCCceeeecCcccCCcEEEEEEEEcCCCC
Q psy12425 237 QRVNVAICAPSQINIPNLIEGRQYEFRVYAQNEAGL 272 (591)
Q Consensus 237 ~~~~~~~~~~~~~~i~~l~~~~~~~y~c~a~n~~g~ 272 (591)
.... ......+.|.+|.++..|.++++|.+..|.
T Consensus 157 ~~~~--~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~ 190 (210)
T 3n06_B 157 EIHF--AGQQTEFKILSLHPGQKYLVQVRCKPDHGY 190 (210)
T ss_dssp EEEE--EETCSEEEECCCCTTCEEEEEEEEEESSSC
T ss_pred EEEe--ccCceEEEEeccCCCCEEEEEEEEecCCCc
Confidence 6542 235678999999999999999999997664
No 473
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=3.7e-13 Score=105.09 Aligned_cols=109 Identities=20% Similarity=0.242 Sum_probs=85.2
Q ss_pred CCC-CCCCCeeeeecCCeeEEEeeccc-cCCCcceeeEEEEeeeCCCCc--eEEec--eeeeeEEEEcCcccCceEEEEE
Q psy12425 481 RPD-PPQFPTVEDIGHDSLALVWRAPI-WDGGSNITNYIVEKREHPMSS--WIRVG--NTRFTTMAITGLSPGHQYEFRV 554 (591)
Q Consensus 481 ~p~-~p~~~~~~~~~~~~v~l~W~~p~-~~~~~~~~~y~v~~~~~~~~~--~~~~~--~~~~~~~~i~~l~~~~~Y~~~v 554 (591)
.|. +|.++.+...+.+++.|+|++|. .+.++.+.+|+|.|+...... +.... ....+.++|.+|.+++.|.|+|
T Consensus 17 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 96 (134)
T 2edx_A 17 TPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWV 96 (134)
T ss_dssp CCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSEEEEESCCTTCEEEEEE
T ss_pred CCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccEEEeCCCCCCCEEEEEE
Confidence 454 77788888889999999999883 234457999999998765432 33332 4566899999999999999999
Q ss_pred EEEcCCcCCCCCCCcceEEeccccccCCCCCceeee
Q psy12425 555 YAENVYGRSDPSTTSDLITTYGELLSGMEAPISLIT 590 (591)
Q Consensus 555 ~A~n~~G~~~~s~~~~~~~t~~~~p~~~~~~~~~~~ 590 (591)
+|.|..|.|++|.... ++|...+|+.+|..+.+..
T Consensus 97 ~A~n~~G~g~~S~~~~-~~T~~~~P~~~P~~l~~~~ 131 (134)
T 2edx_A 97 RAHTDVGPGPESSPVL-VRTDEDVPSGPPRKVESGP 131 (134)
T ss_dssp EEEETTBCCCCCCCEE-EECCCCSSCCCCCCCCCCC
T ss_pred EEEcCCCcCCCCCCEE-eecCCCCCCCCCceeEEEE
Confidence 9999999999998754 5777778878887776654
No 474
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.48 E-value=3.1e-13 Score=102.63 Aligned_cols=106 Identities=22% Similarity=0.190 Sum_probs=85.3
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccC-CC-----cc--eeeEEEEeeeCC-CCceEEeceeeeeEEEEcCcccCceE
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWD-GG-----SN--ITNYIVEKREHP-MSSWIRVGNTRFTTMAITGLSPGHQY 550 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~-~~-----~~--~~~y~v~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~~~Y 550 (591)
+.|++...+.+..++..++.|+|.+|... +| .. +..|.|.|.... ...+..+..+..+.++|.+|.|++.|
T Consensus 16 ~~~s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~~~g~~ts~~v~~L~P~T~Y 95 (137)
T 1wk0_A 16 ALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDY 95 (137)
T ss_dssp HHTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEEEEESCSEEEECSCCTTCEE
T ss_pred hccCCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEEEecCccEEEEcCCCCCCEE
Confidence 45777888899999999999999988654 33 12 689999987653 35566666677789999999999999
Q ss_pred EEEEEEEcCCcCCCCCCCcceEEeccccccCCCCCc
Q psy12425 551 EFRVYAENVYGRSDPSTTSDLITTYGELLSGMEAPI 586 (591)
Q Consensus 551 ~~~v~A~n~~G~~~~s~~~~~~~t~~~~p~~~~~~~ 586 (591)
.|+|+|.|..|.|++|.... ++|.+..|..|.+|-
T Consensus 96 ~~rV~A~n~~G~G~~S~~~~-f~T~~~~P~~P~~p~ 130 (137)
T 1wk0_A 96 HAKVQAEYNSIKGTPSEAEI-FTTLSCEPDIPNPPR 130 (137)
T ss_dssp CEEEEEEETTEECCCCCCCC-EECCCSSSCCCSCSC
T ss_pred EEEEEEEeCCCcCCCCCCEE-EECCCCCCCCCCCCE
Confidence 99999999999999999876 577777776666543
No 475
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.48 E-value=2e-13 Score=95.09 Aligned_cols=81 Identities=22% Similarity=0.447 Sum_probs=70.2
Q ss_pred cceeecCCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEE
Q psy12425 396 DTAYFDKGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVK 475 (591)
Q Consensus 396 ~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~ 475 (591)
..+.+.+|+.+.|.|.+.+ |.|.|.|++||..+..+.++.+...+....|.|.++..+|+|.|+|.|. ..+..+.
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~----n~~~~a~ 78 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAP----QDSRIFL 78 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECT----TTCEEEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEEC----CEEEEEE
Confidence 3466789999999999965 9999999999999999899998888888999999999999999999984 4567777
Q ss_pred EEecCC
Q psy12425 476 IQISDR 481 (591)
Q Consensus 476 ~~v~~~ 481 (591)
|.|..|
T Consensus 79 l~V~eP 84 (84)
T 2lu7_A 79 VSVEEP 84 (84)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 877653
No 476
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.48 E-value=1.4e-13 Score=101.91 Aligned_cols=94 Identities=28% Similarity=0.464 Sum_probs=84.3
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+...+...+|.|.++...|+|.|+|.|.|
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 35788888888899999999999999999999999999999998888888887777778999999999999999999999
Q ss_pred CCcceeeeeEEEEe
Q psy12425 370 KGGVKSTKAELIIM 383 (591)
Q Consensus 370 ~~g~~~~~~~l~v~ 383 (591)
..|.....+.|.|.
T Consensus 92 ~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 92 SEGKQEAEFTLTIQ 105 (106)
T ss_dssp SSCBCCEEEEEEEC
T ss_pred CCCeEEEEEEEEEE
Confidence 99998877777764
No 477
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.48 E-value=4.4e-13 Score=99.93 Aligned_cols=83 Identities=22% Similarity=0.415 Sum_probs=71.3
Q ss_pred CCCeEEEEEeeeccCCCeEEEeeCCeEeeeccceEEEec-------CCeeEEEEeccCCCcceeEEEEEEcCCCccceEE
Q psy12425 402 KGENVVVKIPFTGYPKPKITWYRDNEVIESGGHFHVETS-------ERHAILTIRDASNVDTAPYRVVAENDLGMDSAIV 474 (591)
Q Consensus 402 ~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-------~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~ 474 (591)
.+..+.|.|.+.|.|.|.|+|++||..+....++.+... .....|.|.++...|+|.|+|.|.|..|..+.++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 567899999999999999999999999987665443321 1357899999999999999999999999999999
Q ss_pred EEEecCCCCC
Q psy12425 475 KIQISDRPDP 484 (591)
Q Consensus 475 ~~~v~~~p~~ 484 (591)
.+.+...|.+
T Consensus 94 ~l~v~~~P~~ 103 (126)
T 1he7_A 94 MAAFMDNPFE 103 (126)
T ss_dssp EECCCSCTTS
T ss_pred EEEEEcCCCC
Confidence 9999988855
No 478
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=2.5e-13 Score=102.54 Aligned_cols=98 Identities=23% Similarity=0.235 Sum_probs=77.5
Q ss_pred CCCCCCCCCeeeee--cCCeeEEEeeccccCCCcceeeEEEEeeeCCC---CceEEe-ceeeeeEEEEcCcccCceEEEE
Q psy12425 480 DRPDPPQFPTVEDI--GHDSLALVWRAPIWDGGSNITNYIVEKREHPM---SSWIRV-GNTRFTTMAITGLSPGHQYEFR 553 (591)
Q Consensus 480 ~~p~~p~~~~~~~~--~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~---~~~~~~-~~~~~~~~~i~~l~~~~~Y~~~ 553 (591)
.+|.+|.++.+... +.+++.|+|.+|...++ .+.+|.|+|+.... ..|... .......+.|.+|.+++.|.|+
T Consensus 7 ~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 85 (114)
T 2ede_A 7 GPTSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFR 85 (114)
T ss_dssp CCCSCCEEEEEEECSSCSSCEEEEEECCSSCSS-CCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSCEEEEE
T ss_pred CCCCCCcceEEEEccCCCCEEEEEECCCCCCCC-ceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCCEEEEE
Confidence 35588998998877 77999999998865444 79999999987432 345433 3456679999999999999999
Q ss_pred EEEEcCCcCCCCCCCcceEEeccccc
Q psy12425 554 VYAENVYGRSDPSTTSDLITTYGELL 579 (591)
Q Consensus 554 v~A~n~~G~~~~s~~~~~~~t~~~~p 579 (591)
|+|.|..|.|++|....+ +|.+..|
T Consensus 86 V~A~n~~G~g~~S~~~~~-~T~~~~p 110 (114)
T 2ede_A 86 IQARNSKGVGPLSDPILF-RTLKVSG 110 (114)
T ss_dssp EEEECSSCBCCCCCCEEE-ECCCSSC
T ss_pred EEEEeCCcCcCCcccEEE-EecCCCC
Confidence 999999999999998764 5554433
No 479
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.48 E-value=2.4e-12 Score=109.43 Aligned_cols=132 Identities=21% Similarity=0.206 Sum_probs=100.7
Q ss_pred eEEEEeccCCCcceeEEEEEEcCCCccc-eEEEEEec--CCCCCCCCCeeeeec----CCeeEEEeeccccCC---Ccce
Q psy12425 444 AILTIRDASNVDTAPYRVVAENDLGMDS-AIVKIQIS--DRPDPPQFPTVEDIG----HDSLALVWRAPIWDG---GSNI 513 (591)
Q Consensus 444 ~~l~i~~~~~~~~g~y~c~a~n~~g~~~-~~~~~~v~--~~p~~p~~~~~~~~~----~~~v~l~W~~p~~~~---~~~~ 513 (591)
..+.+.++.+...|.+++.|.|..|... ....+... .+|.+|.++.+.... .+++.|+|++|.... |..+
T Consensus 62 c~~~~~~l~~~~~Y~~~V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~ 141 (210)
T 3n06_B 62 CHFGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFT 141 (210)
T ss_dssp EEECGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCC
T ss_pred EEeCCCCcccceeEEEEEEEEcCCCCeeCCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEE
Confidence 3444456888889999999999999763 23334333 468899988887643 579999999876433 2246
Q ss_pred eeEEEEeeeCCCCceEEeceeeeeEEEEcCcccCceEEEEEEEEcCCcC-CCCCCCcceEEecc
Q psy12425 514 TNYIVEKREHPMSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGR-SDPSTTSDLITTYG 576 (591)
Q Consensus 514 ~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~Y~~~v~A~n~~G~-~~~s~~~~~~~t~~ 576 (591)
.+|+|.|+......|..........+.|.+|.+++.|.|+|+|.|..|. |++|....+ +|++
T Consensus 142 ~~Y~v~y~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~-~Tp~ 204 (210)
T 3n06_B 142 LLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFI-QIPS 204 (210)
T ss_dssp EEEEEEEECTTCSSCEEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEE-ECCT
T ss_pred EEEEEEEecCCCCCCEEEeccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeE-ECcC
Confidence 8999999988777887665555679999999999999999999999997 888887644 4443
No 480
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.48 E-value=8.1e-13 Score=115.24 Aligned_cols=166 Identities=13% Similarity=0.063 Sum_probs=105.1
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECC--E---Eee---------cCCceeEEEeCCeEEEEEcccCCCCceEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNG--R---VVQ---------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 67 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 67 (591)
|..+.+.+|++++|.|.+.+.|.+.+.|+|+. . .+. ...|+.+...+...+|.|.+++++|+|.|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (242)
T 2znx_A 8 PATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYF 87 (242)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEE
Confidence 67899999999999999999989999999953 1 111 134666665566789999999999999999
Q ss_pred EEEEcCCeee-EEEEEEEEecCCC----------CCC---CCcceEEecCceEEEEecCCCCC-CCcceeeEEEE-----
Q psy12425 68 VNLSNSSGSV-SGTFTINITGLPG----------PPI---GPLDVSEITKHTCTLHWNPPKYD-GGLKVTHYVVE----- 127 (591)
Q Consensus 68 c~~~n~~g~~-~~~~~l~v~~~p~----------~p~---~~~~~~~~~~~~~~l~w~~p~~~-~~~~~~~y~~~----- 127 (591)
|.+.|..+.. ...+.|.|...|. ++. .+.......+..++|.|...... ....+.||+-.
T Consensus 88 C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~ 167 (242)
T 2znx_A 88 CQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRL 167 (242)
T ss_dssp EEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCE
T ss_pred EeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCc
Confidence 9999886532 2346777776553 111 11122345678899999753211 01223344310
Q ss_pred -E---E-ec--------CCCceEEEEe-ecCcceEEEcCCcCCcEEEEEEEEEc
Q psy12425 128 -R---R-DI--------SMPHWICIST-TCHDTTFIVQGLTEGQEYLFHVMAVN 167 (591)
Q Consensus 128 -~---~-~~--------~~~~~~~~~~-~~~~~~~~i~~l~~~~~y~~~~~a~n 167 (591)
. . .. .......... ......+.|.++...+.+.|.|.|.|
T Consensus 168 ~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 221 (242)
T 2znx_A 168 EYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXD 221 (242)
T ss_dssp EEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETT
T ss_pred EEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccC
Confidence 0 0 00 0111111110 12335799999999999999999986
No 481
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.48 E-value=2.8e-12 Score=111.73 Aligned_cols=126 Identities=10% Similarity=0.138 Sum_probs=85.3
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCC--CCCcceEEEcCCCccC-------CCeEEeeccccceeccccEEEEEEE
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLP--SSASNSVQIKDPMAAK-------APEIIVPLRNANAIQNHNAQFQCTI 316 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~--s~~~~~~~~~~~~~~~-------~p~~~~~~~~~~~~~g~~~~l~c~~ 316 (591)
...|.|.+++..|.|.|+|.|.|..|.... ......+.+....... .+.+...+....+.+|+.+.|.|.+
T Consensus 72 ~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~ 151 (238)
T 2p1y_A 72 NFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSY 151 (238)
T ss_dssp BCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEEC
T ss_pred eEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEE
Confidence 457999999999999999999987652111 1122344444211100 1155555667778999999999999
Q ss_pred cCCCCCeeEEecCCccC--------------CCCCceEEEE--eCCeEEEEEcceecccceEEEEEEEeCC
Q psy12425 317 TGCPKPTISWLKGSREI--------------TPSARHHIFA--EGDTYTLIINSVYGVDADEYVCRAVNKG 371 (591)
Q Consensus 317 ~~~p~~~v~W~~~~~~~--------------~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~c~a~n~~ 371 (591)
.+.|.+.+.|++++... ....++.+.. .+...+|.|.++..+|+|.|+|.|.|..
T Consensus 152 ~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 152 ENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred ecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 99999999999864211 0123444432 2345689999999999999999999974
No 482
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.48 E-value=6.6e-13 Score=114.17 Aligned_cols=129 Identities=13% Similarity=0.219 Sum_probs=92.0
Q ss_pred ceeeecCcccCCcEEEEEEEEcCCCCCCCCCCcceEEEcCCCccCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEE
Q psy12425 247 SQINIPNLIEGRQYEFRVYAQNEAGLSLPSSASNSVQIKDPMAAKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISW 326 (591)
Q Consensus 247 ~~~~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W 326 (591)
.+|.|.+++..|.|.|.|.+.+..+..... ...+.+. ..++..........+..+..+.+.|.+.+.|.|.|.|
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W 152 (218)
T 4frw_A 79 GSVLLRNAVQADEGEYECRVSTFPAGSFQA--RLRLRVL----VPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTW 152 (218)
T ss_dssp CCEEESSCCGGGCEEEEEEEEEETTEEEEE--EEEEEEE----BCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEE
T ss_pred EEEEEeeccHHHCCceeEEEEeccCceeee--EEEEEEe----eeccceeeeeeeeeeeeccccceeeeccCCcCceEEE
Confidence 469999999999999999998865543221 1222222 1233333444455677899999999999999999999
Q ss_pred ecCCccCCCCCceEEEEeCC---eEEEEEcceecccceEEEEEEEeCCcceeeeeEEEEe
Q psy12425 327 LKGSREITPSARHHIFAEGD---TYTLIINSVYGVDADEYVCRAVNKGGVKSTKAELIIM 383 (591)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~c~a~n~~g~~~~~~~l~v~ 383 (591)
++++..+....... .++. ...|.|.++...|.|.|+|.|.|..|.......+.|.
T Consensus 153 ~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 153 DTEVKGTTSSRSFK--HSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EESSCCEEEEEEEE--CSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred EECCcccccCceEe--cCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 99887664322211 1111 3379999999999999999999999988776666553
No 483
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.48 E-value=3.4e-14 Score=121.20 Aligned_cols=170 Identities=14% Similarity=0.174 Sum_probs=104.9
Q ss_pred EeeccccceeccccEEEEEEEcCCCC---CeeEEecCCccCCCCCce-EE-EEeC---CeEEEEEcceecccceEEEEEE
Q psy12425 296 IVPLRNANAIQNHNAQFQCTITGCPK---PTISWLKGSREITPSARH-HI-FAEG---DTYTLIINSVYGVDADEYVCRA 367 (591)
Q Consensus 296 ~~~~~~~~~~~g~~~~l~c~~~~~p~---~~v~W~~~~~~~~~~~~~-~~-~~~~---~~~~l~i~~~~~~d~g~y~c~a 367 (591)
...+....+.+|+.+.|.|.+.+.+. +.|.| ++ ..+...... .. ..++ ...+|.|.++..+|.|.|+|.|
T Consensus 8 ~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~~-~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~~ 85 (214)
T 1ow0_A 8 LHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TP-SSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTA 85 (214)
T ss_dssp EECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-SS-CSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEE
T ss_pred EECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-cC-CCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEEE
Confidence 34456677889999999999998754 68999 43 332211000 00 0011 2346888999999999999999
Q ss_pred EeCCcceeeeeEEE---EecCCcccCCCCcccceeecCCCeEEEEEeeecc-CC-CeEEEeeCCeEeeeccceE---EEe
Q psy12425 368 VNKGGVKSTKAELI---IMTAPKFNVPPRFRDTAYFDKGENVVVKIPFTGY-PK-PKITWYRDNEVIESGGHFH---VET 439 (591)
Q Consensus 368 ~n~~g~~~~~~~l~---v~~~p~~~~~~~~~~~~~~~~g~~~~l~c~~~~~-p~-~~v~W~~~~~~~~~~~~~~---~~~ 439 (591)
.|..+.......+. +..+|.+...+. ....+..|..+.|.|.+.|. |. +.|.|+++|..+....... ...
T Consensus 86 ~~~~~~~~~~~~i~~~~~~~~P~v~~~~~--~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~ 163 (214)
T 1ow0_A 86 AYPESKTPLTATLSKSGNTFRPEVHLLPP--PSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQE 163 (214)
T ss_dssp CCSSCSSCEEEEEECCSSCCCCEEEEECC--CTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEEC
T ss_pred ecCCCCCceeEeeccCCCCCCCEEEecCC--CHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCccc
Confidence 99876543333332 234454432211 11124678999999999985 43 4999999998876542111 111
Q ss_pred ---cCC----eeEEEEeccCCCcceeEEEEEEcCCCc
Q psy12425 440 ---SER----HAILTIRDASNVDTAPYRVVAENDLGM 469 (591)
Q Consensus 440 ---~~~----~~~l~i~~~~~~~~g~y~c~a~n~~g~ 469 (591)
.+. ...|.+.....++.|.|+|.|.|....
T Consensus 164 ~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 164 PSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp SCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred ccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 111 123344444334589999999998543
No 484
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.47 E-value=1.1e-12 Score=116.90 Aligned_cols=168 Identities=10% Similarity=0.046 Sum_probs=106.8
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCE-----Eee---------cCCceeEEEeCCeEEEEEcccCCCCceEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGR-----VVQ---------SDDRFKFTVLDDYIIIFIKEIRKEDAGDYT 67 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~-----~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 67 (591)
|..+.+.+|++++|.|.+.+.|.+.+.|+|++. .+. ...|+.+...+...+|.|.+++.+|+|.|.
T Consensus 19 p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 98 (276)
T 3auv_A 19 PSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYY 98 (276)
T ss_dssp CSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEE
Confidence 678899999999999999999999999998641 221 134666666666789999999999999999
Q ss_pred EEEEcCCeee-EEEEEEEEecCCC----------CCC----CCcceEEecCceEEEEecCCCCCC-CcceeeEEEE----
Q psy12425 68 VNLSNSSGSV-SGTFTINITGLPG----------PPI----GPLDVSEITKHTCTLHWNPPKYDG-GLKVTHYVVE---- 127 (591)
Q Consensus 68 c~~~n~~g~~-~~~~~l~v~~~p~----------~p~----~~~~~~~~~~~~~~l~w~~p~~~~-~~~~~~y~~~---- 127 (591)
|.+.|..+.. .....|.|...|. .|. .|.......+..++|.|....... ...+.||+-.
T Consensus 99 C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~ 178 (276)
T 3auv_A 99 CQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKC 178 (276)
T ss_dssp EEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCC
T ss_pred EEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCC
Confidence 9999976542 3335677766542 111 112334556788999997532110 1233443310
Q ss_pred --E----Ee---------cCCCceEEEEe-ecCcceEEEcCCcCCcEEEEEEEEEccC
Q psy12425 128 --R----RD---------ISMPHWICIST-TCHDTTFIVQGLTEGQEYLFHVMAVNEN 169 (591)
Q Consensus 128 --~----~~---------~~~~~~~~~~~-~~~~~~~~i~~l~~~~~y~~~~~a~n~~ 169 (591)
. .. .....+..... ......+.|.++...+.+.|.|.|.|..
T Consensus 179 ~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 236 (276)
T 3auv_A 179 LEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFF 236 (276)
T ss_dssp EEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred cEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCc
Confidence 0 00 00111111111 1233479999999999999999999874
No 485
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.47 E-value=1.7e-13 Score=102.04 Aligned_cols=99 Identities=19% Similarity=0.251 Sum_probs=79.4
Q ss_pred CCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEe-ceeeeeEEEEcCcccCceEEEEEEEEc
Q psy12425 480 DRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV-GNTRFTTMAITGLSPGHQYEFRVYAEN 558 (591)
Q Consensus 480 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~~Y~~~v~A~n 558 (591)
+.|.+|. +.+...+.+++.|+|++|. +.++.+.+|.|+|+......|... .....+.++|.+|.+++.|.|+|+|.|
T Consensus 6 ~~P~~p~-~~v~~~~~~sv~l~W~~p~-~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 83 (107)
T 2dn7_A 6 SGPGRPT-MMISTTAMNTALLQWHPPK-ELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKN 83 (107)
T ss_dssp CCCCCCE-EEEEECSTTEEEEEEECCS-SCSSCCCEEEEEEEETTCSSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEE
T ss_pred CCCCCCc-EeEEecCCCEEEEEECCCC-CCCCceeEEEEEEEECCCCCCEEEEeCCCccEEEeCCCCCCCEEEEEEEEEc
Confidence 4677776 6777778999999999887 444579999999998877777665 344567999999999999999999999
Q ss_pred CCcCCCCCCCcceEEeccccccCC
Q psy12425 559 VYGRSDPSTTSDLITTYGELLSGM 582 (591)
Q Consensus 559 ~~G~~~~s~~~~~~~t~~~~p~~~ 582 (591)
..|.|++|.. .+.|...+|..|
T Consensus 84 ~~G~g~~s~~--~~~T~~~~P~~p 105 (107)
T 2dn7_A 84 RAGLGEEFEK--EIRTPEDLSGPS 105 (107)
T ss_dssp TTEEEEEEEE--EEECCCCCCCCC
T ss_pred CCcccCCeee--EEeCCCCCCCCC
Confidence 9999999873 356665555544
No 486
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.47 E-value=6.1e-13 Score=99.48 Aligned_cols=87 Identities=14% Similarity=0.248 Sum_probs=71.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCE-Eee-------cCCceeEEE-eCCeEEEEEcccCCCCceEEEEEEEc
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGR-VVQ-------SDDRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSN 72 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~-~~~-------~~~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~c~~~n 72 (591)
|.++.+.+|+++.|.|.+.+.|.+.+.|+|++. .+. ...++.+.. .....+|.|.+++.+|+|.|.|.+.|
T Consensus 13 ~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n 92 (108)
T 3m45_A 13 TQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT 92 (108)
T ss_dssp CCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS
T ss_pred CCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc
Confidence 678999999999999999999999999999875 222 223555433 33467999999999999999999999
Q ss_pred CCeeeEEEEEEEEecCC
Q psy12425 73 SSGSVSGTFTINITGLP 89 (591)
Q Consensus 73 ~~g~~~~~~~l~v~~~p 89 (591)
.|..+..+.|.|..+|
T Consensus 93 -~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 93 -MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp -SSCEEEEEEEEEECCC
T ss_pred -CCCcEEEEEEEEEcCC
Confidence 8888888999998765
No 487
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=1.9e-13 Score=100.32 Aligned_cols=94 Identities=30% Similarity=0.416 Sum_probs=79.3
Q ss_pred cCCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCC-CCceEEEEeCCeEEEEEcceecccceEEEEEEE
Q psy12425 290 AKAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITP-SARHHIFAEGDTYTLIINSVYGVDADEYVCRAV 368 (591)
Q Consensus 290 ~~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~ 368 (591)
..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.. ..++.+..++ +|.|.++..+|+|.|+|.|.
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQG---TLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTC---CEEEESCCTTTCCEEEEEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCC---EEEEccCCcccCEEEEEEEE
Confidence 4678888888888899999999999999999999999999887763 3344443333 69999999999999999999
Q ss_pred eCCcceeeeeEEEEecCC
Q psy12425 369 NKGGVKSTKAELIIMTAP 386 (591)
Q Consensus 369 n~~g~~~~~~~l~v~~~p 386 (591)
|..|.....+.|.|..+|
T Consensus 83 n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 83 SSSGETSWSAVLDVTESG 100 (100)
T ss_dssp CSSCCCBCCEEEEEESCC
T ss_pred cCCCCEEEEEEEEEecCC
Confidence 999998888888887653
No 488
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.47 E-value=1.1e-12 Score=114.50 Aligned_cols=163 Identities=10% Similarity=0.058 Sum_probs=108.5
Q ss_pred CceeeeecCCeEEEEEEeccCC----CceEEEEECC--E---Eee---------cCCceeEEEeCCeEEEEEcccCCCCc
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQ----PMEVSLTKNG--R---VVQ---------SDDRFKFTVLDDYIIIFIKEIRKEDA 63 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p----~~~v~W~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~ 63 (591)
|..+.+.+|++++|.|.+.+.| .+.+.|+|++ . .+. ...|+.+...++..+|.|.+++++|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDV 87 (240)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhC
Confidence 6788999999999999999988 7899999952 2 111 13466666666778999999999999
Q ss_pred eEEEEEEEcCCee-eEEEEEEEEecCCC--CCC----CCcceEEecCceEEEEecCCCCCC-CcceeeEEEEEEecCC--
Q psy12425 64 GDYTVNLSNSSGS-VSGTFTINITGLPG--PPI----GPLDVSEITKHTCTLHWNPPKYDG-GLKVTHYVVERRDISM-- 133 (591)
Q Consensus 64 g~Y~c~~~n~~g~-~~~~~~l~v~~~p~--~p~----~~~~~~~~~~~~~~l~w~~p~~~~-~~~~~~y~~~~~~~~~-- 133 (591)
|.|.|.|.|..+. ......|.|...+. .|. .+.......+..++|.|....... ...+.||+ ...+.
T Consensus 88 G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k---~~~g~~~ 164 (240)
T 1moe_A 88 ATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVK---QRPEQGL 164 (240)
T ss_dssp EEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEE---ECTTSCC
T ss_pred EEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEE---ECCCCCc
Confidence 9999999998665 34456778876543 111 122334556788999997532110 12344433 11110
Q ss_pred --------------------CceEEEEe-ecCcceEEEcCCcCCcEEEEEEEEEc
Q psy12425 134 --------------------PHWICIST-TCHDTTFIVQGLTEGQEYLFHVMAVN 167 (591)
Q Consensus 134 --------------------~~~~~~~~-~~~~~~~~i~~l~~~~~y~~~~~a~n 167 (591)
........ ......+.|.++...+.+.|.|.|.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 165 EWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 11111110 12345799999999999999999985
No 489
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.47 E-value=2.3e-13 Score=113.75 Aligned_cols=158 Identities=10% Similarity=0.082 Sum_probs=101.0
Q ss_pred CceeeeecCCeEEEEEEecc-CCCceEEEEECCEEee---cCC-----------c--eeEEEeCCeEEEEEcccCCCCce
Q psy12425 2 PNALYIPEGDNTKVKIFYAG-DQPMEVSLTKNGRVVQ---SDD-----------R--FKFTVLDDYIIIFIKEIRKEDAG 64 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~-~p~~~v~W~~~~~~~~---~~~-----------~--~~~~~~~~~~~l~i~~~~~~d~g 64 (591)
|..+.+.+|++|+|.|.+.+ .+.+.|.|+|++..+. ... + .++... ...+|+|.+++.+|+|
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-~~~sL~I~~v~~~D~G 83 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT-QSYSLQLSNLKMEDTG 83 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC-TTCCEEECSCCGGGCE
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC-CCeEEEECCCCcccCc
Confidence 78899999999999999976 4567999999987552 110 0 022222 2458999999999999
Q ss_pred EEEEEEEcCCeeeEEEEEEEEecCCCCCCCCcceE-EecCc-eEEEEecCCCCCCCcceeeEEEEEEecCCCceEEEEee
Q psy12425 65 DYTVNLSNSSGSVSGTFTINITGLPGPPIGPLDVS-EITKH-TCTLHWNPPKYDGGLKVTHYVVERRDISMPHWICISTT 142 (591)
Q Consensus 65 ~Y~c~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~-~~~~~-~~~l~w~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 142 (591)
.|+|.+.+..|.....+.|.|...+..|....... ...+. .++|.|.... +.+...+.+.. .+. .+
T Consensus 84 ~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g---~~p~p~i~W~~--~g~----~l--- 151 (193)
T 2if7_A 84 SYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVED---ADDNVSFRWEA--LGN----TL--- 151 (193)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEES---CCTTCEEEEEE--TTE----EE---
T ss_pred eEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEec---CCCceEEEEEe--CCE----Ec---
Confidence 99999999988877788899987655443211111 11233 7899997532 11112233322 111 11
Q ss_pred cCcceEEEcCCcCC-cEEEEEEEEEccCCCC
Q psy12425 143 CHDTTFIVQGLTEG-QEYLFHVMAVNENGMG 172 (591)
Q Consensus 143 ~~~~~~~i~~l~~~-~~y~~~~~a~n~~g~~ 172 (591)
.....+.+.....+ +.+.|+|.|.|..|..
T Consensus 152 ~~~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~ 182 (193)
T 2if7_A 152 SSQPNLTVSWDPRISSEQDYTCIAENAVSNL 182 (193)
T ss_dssp ESSSEEEEEECTTTCSCCEEEEEEEETTEEE
T ss_pred CCCCeEEEEeccCcCCCCcEEEEEECCCCcc
Confidence 12234555433333 6899999999987753
No 490
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.47 E-value=1.9e-13 Score=100.41 Aligned_cols=95 Identities=23% Similarity=0.438 Sum_probs=79.7
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEE-EeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF-AEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+......... ..++..+|.|.++...|+|.|+|.|.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 3566666677788899999999999999999999999999888776544333 445557899999999999999999999
Q ss_pred CCcceeeeeEEEEecC
Q psy12425 370 KGGVKSTKAELIIMTA 385 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~~ 385 (591)
..|.....+.|.|...
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9999888888888654
No 491
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=1.4e-13 Score=104.58 Aligned_cols=88 Identities=26% Similarity=0.407 Sum_probs=75.3
Q ss_pred cCCCCCCCCCeeeeecCCeeEEEeeccccCCCcceeeEEEEeeeCCCCceEEe--ceeeeeEEEEcCcccCceEEEEEEE
Q psy12425 479 SDRPDPPQFPTVEDIGHDSLALVWRAPIWDGGSNITNYIVEKREHPMSSWIRV--GNTRFTTMAITGLSPGHQYEFRVYA 556 (591)
Q Consensus 479 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~i~~l~~~~~Y~~~v~A 556 (591)
.+.|.+|.++.+...+.+++.|+|++|..+ | .+.+|+|+|+......|... .......++|.+|.+++.|.|+|+|
T Consensus 15 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~-g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 92 (118)
T 2yrz_A 15 AGVPDTPTRLVFSALGPTSLRVSWQEPRCE-R-PLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRA 92 (118)
T ss_dssp CSCCCCCCCCEECCCBTTEEEEECCCCCCS-S-CEEEEEEEEEBSSSCCEEEEEESCTTCCEEEEESCCTTCEEEEEEEE
T ss_pred CCCCCCCCceEEEeCCCCEEEEEeCCCCCC-C-CccEEEEEEEECCCCceEEEEcCCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 357889999999999999999999988654 3 89999999998776677655 3345689999999999999999999
Q ss_pred EcCCcCCCCCCC
Q psy12425 557 ENVYGRSDPSTT 568 (591)
Q Consensus 557 ~n~~G~~~~s~~ 568 (591)
.|..|.|++|..
T Consensus 93 ~n~~G~g~~S~~ 104 (118)
T 2yrz_A 93 QSQEGWGREREG 104 (118)
T ss_dssp EESSCEEEEEEE
T ss_pred EcCCcCCCCcCC
Confidence 999999998864
No 492
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=5.2e-14 Score=106.20 Aligned_cols=86 Identities=10% Similarity=0.199 Sum_probs=73.5
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEeecCCceeEEE-eCCeEEEEEcccCCCCceEEEEEEEcCCeeeEEE
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQSDDRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSNSSGSVSGT 80 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~c~~~n~~g~~~~~ 80 (591)
|.++.+.+|+++.|.|.+.|.|.+.+.|+|||..+..+.++.+.. .+...+|.|.+++.+|+|.|+|.+ |.....
T Consensus 20 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~ 95 (115)
T 2cr6_A 20 LEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRAS 95 (115)
T ss_dssp CCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TTEECC
T ss_pred CccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CCeeEE
Confidence 567899999999999999999999999999999998887777653 355678999999999999999993 556667
Q ss_pred EEEEEecCCCC
Q psy12425 81 FTINITGLPGP 91 (591)
Q Consensus 81 ~~l~v~~~p~~ 91 (591)
+.|.|...|..
T Consensus 96 ~~L~V~~~p~~ 106 (115)
T 2cr6_A 96 AALRVTEKPSV 106 (115)
T ss_dssp EEEEEECCSSC
T ss_pred EEEEEECCCce
Confidence 88999887654
No 493
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.47 E-value=3.8e-13 Score=115.18 Aligned_cols=167 Identities=14% Similarity=0.148 Sum_probs=106.1
Q ss_pred CCceeeeecCCeEEEEEEeccC-------CCceEEEEECCEE------ee---------c--CCceeEEE--eCCeEEEE
Q psy12425 1 MPNALYIPEGDNTKVKIFYAGD-------QPMEVSLTKNGRV------VQ---------S--DDRFKFTV--LDDYIIIF 54 (591)
Q Consensus 1 ~p~~~~v~~G~~~~l~C~~~~~-------p~~~v~W~~~~~~------~~---------~--~~~~~~~~--~~~~~~l~ 54 (591)
.|..+.+.+|+++.|.|.+.+. +.+.+.|+|++.. +. . ..|+.+.. .....+|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 85 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLS 85 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEE
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEE
Confidence 4788999999999999999754 5789999998752 11 1 13333321 12345899
Q ss_pred EcccCCCCceEEEEEEEcCCeee----EEEEEEEEecCCCCCCCCcceEEecCceEEEEecCCCCCCCcceeeEEEEEEe
Q psy12425 55 IKEIRKEDAGDYTVNLSNSSGSV----SGTFTINITGLPGPPIGPLDVSEITKHTCTLHWNPPKYDGGLKVTHYVVERRD 130 (591)
Q Consensus 55 i~~~~~~d~g~Y~c~~~n~~g~~----~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~w~~p~~~~~~~~~~y~~~~~~ 130 (591)
|.+++.+|+|.|.|.+.+..+.. ...+.|.|...+..|..........+..++|.|.......+.+...+.+....
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~ 165 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNA 165 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEEEESST
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEEEeCCC
Confidence 99999999999999999876332 24688888887655542111122357789999986432111222233332221
Q ss_pred cCCCceEEEEeecCcceEEEcCCcCCcEEEEEEEEEccCCC
Q psy12425 131 ISMPHWICISTTCHDTTFIVQGLTEGQEYLFHVMAVNENGM 171 (591)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~~~a~n~~g~ 171 (591)
..... ........+.|..+..++.+.|+|.|.|..+.
T Consensus 166 ~~~~~----~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~ 202 (214)
T 2zg1_A 166 LSPLD----PETTRSSELTLTPRPEDHGTNLTCQMKRQGAQ 202 (214)
T ss_dssp TSSSC----SSCCCSSEEEECCCTTCCSCEEEEEEECC---
T ss_pred CccCC----CCceeEEEEEEecccHHcCcEEEEEEEeCCCC
Confidence 11000 01234567888888888889999999986543
No 494
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.47 E-value=9.4e-13 Score=95.91 Aligned_cols=88 Identities=23% Similarity=0.412 Sum_probs=78.2
Q ss_pred eeccccceeccccEEEEEEEcCC-CCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCccee
Q psy12425 297 VPLRNANAIQNHNAQFQCTITGC-PKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVKS 375 (591)
Q Consensus 297 ~~~~~~~~~~g~~~~l~c~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~~ 375 (591)
..+.+..+.+|+.+.|.|.+.+. |.+.+.|++++..+....++.+...++..+|.|.++...|+|.|+|.|.|..|...
T Consensus 6 ~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 85 (97)
T 2bk8_A 6 GQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDS 85 (97)
T ss_dssp CCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred ccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEe
Confidence 34456778999999999999997 99999999999999888888887778888999999999999999999999999988
Q ss_pred eeeEEEEec
Q psy12425 376 TKAELIIMT 384 (591)
Q Consensus 376 ~~~~l~v~~ 384 (591)
..+.|.|..
T Consensus 86 ~~~~l~V~~ 94 (97)
T 2bk8_A 86 SYAELFVKG 94 (97)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEEEe
Confidence 888888753
No 495
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.47 E-value=5.8e-12 Score=111.11 Aligned_cols=140 Identities=14% Similarity=0.188 Sum_probs=95.6
Q ss_pred CceeeecCcccCCcEEEEEEEEcCCCCCCC-CCCcceEEEcCCC---------ccCCCeEEeeccccceeccccEEEEEE
Q psy12425 246 PSQINIPNLIEGRQYEFRVYAQNEAGLSLP-SSASNSVQIKDPM---------AAKAPEIIVPLRNANAIQNHNAQFQCT 315 (591)
Q Consensus 246 ~~~~~i~~l~~~~~~~y~c~a~n~~g~~~~-s~~~~~~~~~~~~---------~~~~p~~~~~~~~~~~~~g~~~~l~c~ 315 (591)
...|.|.+++..|.|.|.|.|.|..+.... ......+.+..+. ...+|.+...+....+.+|+.+.|.|.
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 164 (257)
T 3gkz_A 85 QVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCS 164 (257)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEE
T ss_pred eEEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEE
Confidence 347999999999999999999986322111 1123445554321 012456666666778899999999999
Q ss_pred EcCCCCC-eeEEecC--CccCC------------CCCceEEEEeCCeEEEEEcceecccceEEEEEEEeCCcce-eeeeE
Q psy12425 316 ITGCPKP-TISWLKG--SREIT------------PSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVNKGGVK-STKAE 379 (591)
Q Consensus 316 ~~~~p~~-~v~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n~~g~~-~~~~~ 379 (591)
+.+.+.+ .+.|++. +.... ...++.+...+...+|.|.+++.+|+|.|+|.|.+..... .....
T Consensus 165 ~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~ 244 (257)
T 3gkz_A 165 ASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTK 244 (257)
T ss_dssp ESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEE
T ss_pred EccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEE
Confidence 9998887 8999984 22211 1245555566677789999999999999999998754433 23345
Q ss_pred EEEecC
Q psy12425 380 LIIMTA 385 (591)
Q Consensus 380 l~v~~~ 385 (591)
|.|...
T Consensus 245 l~v~~~ 250 (257)
T 3gkz_A 245 LEIKRA 250 (257)
T ss_dssp EEECCC
T ss_pred EEEEeC
Confidence 555543
No 496
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=2e-13 Score=105.47 Aligned_cols=93 Identities=26% Similarity=0.556 Sum_probs=76.8
Q ss_pred cccCCCCcccceeecCCCeEEEEEeeeccCCCeEEEeeCC----------------------------eEe-eeccceEE
Q psy12425 387 KFNVPPRFRDTAYFDKGENVVVKIPFTGYPKPKITWYRDN----------------------------EVI-ESGGHFHV 437 (591)
Q Consensus 387 ~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~----------------------------~~~-~~~~~~~~ 437 (591)
.+..+..+.....+..|+.+.|.|.+.|.|.|.+.|++++ ..+ ....++.+
T Consensus 17 ~~~~~~~~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i 96 (139)
T 1gxe_A 17 HLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRV 96 (139)
T ss_dssp CCSSSCCCCCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEE
T ss_pred eEecCcCCCCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEE
Confidence 3344444456778899999999999999999999999998 444 24456666
Q ss_pred EecCCeeEEEEeccCCCcceeEEEEEEcCCCccceEEEEEec
Q psy12425 438 ETSERHAILTIRDASNVDTAPYRVVAENDLGMDSAIVKIQIS 479 (591)
Q Consensus 438 ~~~~~~~~l~i~~~~~~~~g~y~c~a~n~~g~~~~~~~~~v~ 479 (591)
...+....|.|.++...|+|.|+|.|.|..|.....+.|.|.
T Consensus 97 ~~~~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 97 ETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEETTEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EeCCCEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 666677899999999999999999999999999888888774
No 497
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.46 E-value=3.4e-13 Score=98.90 Aligned_cols=93 Identities=29% Similarity=0.478 Sum_probs=79.5
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCc-eEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSAR-HHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
.+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... +....++...+|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 467777777788899999999999999999999999999988876543 4444555667899999999999999999999
Q ss_pred CCcceeeeeEEEEe
Q psy12425 370 KGGVKSTKAELIIM 383 (591)
Q Consensus 370 ~~g~~~~~~~l~v~ 383 (591)
..|.....+.|.|.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 84 EYGARQCEARLEVR 97 (99)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCceeEEEEEEEE
Confidence 99998888888775
No 498
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.46 E-value=5.8e-13 Score=101.93 Aligned_cols=90 Identities=8% Similarity=0.125 Sum_probs=71.8
Q ss_pred CceeeeecCCeEEEEEEeccCCCceEEEEECCEEee--------cCCceeEEE-eCCeEEEEEcccCCCCceEEEEEEEc
Q psy12425 2 PNALYIPEGDNTKVKIFYAGDQPMEVSLTKNGRVVQ--------SDDRFKFTV-LDDYIIIFIKEIRKEDAGDYTVNLSN 72 (591)
Q Consensus 2 p~~~~v~~G~~~~l~C~~~~~p~~~v~W~~~~~~~~--------~~~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~c~~~n 72 (591)
|..+.+.+|++++|.|.+.+.|.+.+.|++++..+. ...++.+.. .....+|.|.+++.+|+|.|.|.+.|
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 87 (124)
T 3rbg_A 8 TETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYS 87 (124)
T ss_dssp EEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEES
T ss_pred CccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEc
Confidence 568899999999999999999999999998665322 344555542 33457999999999999999999999
Q ss_pred CCeeeEEEEEEEEecCCCCC
Q psy12425 73 SSGSVSGTFTINITGLPGPP 92 (591)
Q Consensus 73 ~~g~~~~~~~l~v~~~p~~p 92 (591)
. |.....+.|.|...|..+
T Consensus 88 ~-g~~~~~~~l~V~~~P~~~ 106 (124)
T 3rbg_A 88 D-SVSTKEVKVIVLATMKGE 106 (124)
T ss_dssp S-SEEEEEEEEEEECC----
T ss_pred C-CCCcEEEEEEEEeCCCCC
Confidence 9 888899999999877543
No 499
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=4.3e-13 Score=100.54 Aligned_cols=98 Identities=24% Similarity=0.491 Sum_probs=84.7
Q ss_pred CCCeEEeeccccceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEE-EeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 291 KAPEIIVPLRNANAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIF-AEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 291 ~~p~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......... ..+...+|.|.++..+|+|.|+|.|.|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 5788888888889999999999999999999999999999888766655443 334457899999999999999999999
Q ss_pred CCcceeeeeEEEEecCCcc
Q psy12425 370 KGGVKSTKAELIIMTAPKF 388 (591)
Q Consensus 370 ~~g~~~~~~~l~v~~~p~~ 388 (591)
..|.....+.|.|..+|..
T Consensus 88 ~~g~~~~~~~l~V~~~p~~ 106 (110)
T 2dm3_A 88 RAGQNSFSLELVVAAKESG 106 (110)
T ss_dssp SSCEEEECCEEEEECCCCS
T ss_pred CCCEEEEEEEEEEeCCCCC
Confidence 9999988999999887653
No 500
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.46 E-value=3.5e-13 Score=95.55 Aligned_cols=78 Identities=21% Similarity=0.391 Sum_probs=66.5
Q ss_pred CCeEEeecccc--ceeccccEEEEEEEcCCCCCeeEEecCCccCCCCCceEEEEeCCeEEEEEcceecccceEEEEEEEe
Q psy12425 292 APEIIVPLRNA--NAIQNHNAQFQCTITGCPKPTISWLKGSREITPSARHHIFAEGDTYTLIINSVYGVDADEYVCRAVN 369 (591)
Q Consensus 292 ~p~~~~~~~~~--~~~~g~~~~l~c~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~c~a~n 369 (591)
||.+..+..+. .+.+|+.+.|.|.+.+ |.+.+.|+++|..+..+.++.+..++..++|.|.++..+|+|.|+|.|.|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 45555554443 3568999999999866 88899999999999999999999999999999999999999999999965
Q ss_pred C
Q psy12425 370 K 370 (591)
Q Consensus 370 ~ 370 (591)
.
T Consensus 83 ~ 83 (91)
T 2lvc_A 83 E 83 (91)
T ss_dssp C
T ss_pred e
Confidence 4
Done!