Query psy12426
Match_columns 616
No_of_seqs 308 out of 2985
Neff 11.3
Searched_HMMs 29240
Date Fri Aug 16 19:00:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12426.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12426hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jll_A NCAM2, neural cell adhe 100.0 3.2E-41 1.1E-45 337.2 43.6 268 224-497 108-380 (389)
2 3b43_A Titin; I-SET IG fold, e 100.0 2.1E-36 7E-41 316.8 37.4 466 1-493 5-561 (570)
3 2v5y_A Receptor-type tyrosine- 100.0 4.1E-36 1.4E-40 323.8 37.1 328 213-600 163-505 (731)
4 2v5y_A Receptor-type tyrosine- 100.0 1.8E-34 6.1E-39 311.1 31.8 403 1-600 165-610 (731)
5 3b43_A Titin; I-SET IG fold, e 100.0 7.5E-33 2.5E-37 289.8 35.8 378 1-394 101-562 (570)
6 3l5h_A Interleukin-6 receptor 100.0 6.8E-33 2.3E-37 292.3 21.3 478 9-604 10-544 (589)
7 2nzi_A Titin; IG-domain, FNIII 100.0 1.1E-30 3.6E-35 251.5 28.5 225 173-402 63-290 (305)
8 2jll_A NCAM2, neural cell adhe 100.0 6.2E-30 2.1E-34 255.3 34.2 319 223-605 7-340 (389)
9 3dmk_A DOWN syndrome cell adhe 100.0 1.6E-30 5.5E-35 285.0 30.6 406 86-536 306-753 (816)
10 1e07_A Carcinoembryonic antige 100.0 1.1E-28 3.9E-33 262.8 43.3 435 10-494 119-632 (642)
11 3kld_A Contactin 4, axcam, BIG 100.0 2.3E-30 8E-35 257.2 22.7 285 1-307 5-382 (384)
12 1e07_A Carcinoembryonic antige 100.0 6.3E-28 2.2E-32 257.1 35.5 348 9-394 210-632 (642)
13 3dmk_A DOWN syndrome cell adhe 100.0 4.3E-29 1.5E-33 273.7 26.3 452 10-493 256-800 (816)
14 1i1r_A GP130, interleukin-6 re 100.0 1.8E-28 6.1E-33 235.0 27.1 271 223-505 11-299 (303)
15 1zlg_A Anosmin 1; insulin-like 100.0 3.8E-26 1.3E-30 242.4 42.2 375 159-598 212-671 (680)
16 2d9q_B Granulocyte colony-stim 100.0 4.1E-28 1.4E-32 233.4 24.3 279 224-511 8-311 (313)
17 1cs6_A Axonin-1; neural cell a 100.0 2E-27 6.8E-32 236.5 23.3 282 1-307 4-381 (382)
18 2rik_A Titin; I-SET IG fold, p 100.0 1.2E-26 4E-31 220.7 24.2 264 1-307 5-283 (284)
19 2ocw_A Polymeric-immunoglobuli 100.0 4E-25 1.4E-29 232.9 37.7 377 7-394 5-537 (585)
20 3laf_A Deleted in colorectal c 100.0 1E-26 3.5E-31 233.2 24.0 337 6-393 25-392 (403)
21 3l5h_A Interleukin-6 receptor 99.9 2.9E-27 1E-31 249.3 19.1 435 15-499 102-584 (589)
22 1bih_A Hemolin; insect immunit 99.9 4.3E-26 1.5E-30 228.0 24.7 348 1-393 6-387 (395)
23 3p3y_A Neurofascin; IG domains 99.9 3.9E-27 1.3E-31 236.4 17.0 346 1-393 16-394 (404)
24 2v5m_A Dscam; neurobiology SPL 99.9 2.3E-26 7.9E-31 229.3 21.6 342 1-393 3-380 (388)
25 2ec8_A MAST/stem cell growth f 99.9 2.4E-26 8.2E-31 238.6 19.2 294 1-311 36-414 (524)
26 3t1w_A Four-domain fibronectin 99.9 1.3E-24 4.5E-29 215.3 29.4 266 267-606 54-324 (375)
27 1zlg_A Anosmin 1; insulin-like 99.9 4E-24 1.4E-28 226.9 33.8 211 283-498 134-366 (680)
28 2yd9_A Receptor-type tyrosine- 99.9 1.6E-25 5.5E-30 215.0 21.0 268 1-312 6-295 (304)
29 3qs7_E FL cytokine receptor; i 99.9 3.9E-26 1.3E-30 228.2 17.1 289 9-315 55-421 (423)
30 3qs9_E FL cytokine receptor; i 99.9 4.3E-26 1.5E-30 234.0 17.8 285 9-311 55-417 (527)
31 1n26_A IL-6 receptor alpha cha 99.9 5.3E-24 1.8E-28 205.5 29.7 268 225-507 15-297 (325)
32 1fnf_A Fibronectin; RGD, extra 99.9 5.8E-23 2E-27 202.9 37.1 326 136-499 29-362 (368)
33 1fnf_A Fibronectin; RGD, extra 99.9 7E-24 2.4E-28 209.6 29.4 262 266-601 52-316 (368)
34 2nzi_A Titin; IG-domain, FNIII 99.9 3.4E-24 1.2E-28 206.0 25.9 277 214-505 3-293 (305)
35 3t1w_A Four-domain fibronectin 99.9 1E-22 3.6E-27 201.6 35.8 323 137-496 31-361 (375)
36 2y25_A Myomesin; structural pr 99.9 1.4E-24 4.9E-29 209.9 21.4 266 1-308 7-315 (317)
37 2rcj_C Light chain; immunoglob 99.9 1.6E-23 5.4E-28 217.3 29.3 286 7-305 5-417 (523)
38 2q7n_A Leukemia inhibitory fac 99.9 1.4E-23 4.8E-28 209.5 26.7 300 182-501 167-480 (488)
39 3laf_A Deleted in colorectal c 99.9 8.6E-24 3E-28 211.9 21.2 259 1-310 121-403 (403)
40 1qz1_A Neural cell adhesion mo 99.9 1E-23 3.5E-28 201.1 20.3 265 1-308 2-290 (291)
41 3r8q_A Fibronectin; heparin, F 99.9 3.2E-23 1.1E-27 197.2 23.6 226 309-606 20-247 (290)
42 2wim_A N-CAM 2, NCAM2, neural 99.9 8.3E-24 2.8E-28 201.8 19.2 264 1-310 4-286 (291)
43 1tdq_A Tenascin-R; extracellul 99.9 5E-23 1.7E-27 195.3 22.8 223 304-601 9-237 (283)
44 2ocw_A Polymeric-immunoglobuli 99.9 2.2E-22 7.6E-27 211.9 29.0 298 1-310 112-548 (585)
45 1ry7_B FGFR-3, fibroblast grow 99.9 2E-24 6.9E-29 210.4 10.6 263 8-312 14-331 (334)
46 3lpw_A A77-A78 domain from tit 99.9 3.5E-22 1.2E-26 178.3 23.3 192 307-504 3-196 (197)
47 2vkw_A Neural cell adhesion mo 99.9 8.7E-23 3E-27 183.8 18.7 188 304-497 3-196 (209)
48 4fqp_A Poliovirus receptor; im 99.9 5.9E-23 2E-27 197.9 17.9 260 6-310 4-306 (313)
49 4fom_A Poliovirus receptor-rel 99.9 7.4E-24 2.5E-28 203.8 10.5 277 2-311 2-303 (308)
50 1wio_A CD4, T-cell surface gly 99.9 5.4E-23 1.8E-27 202.6 16.5 314 11-389 3-351 (363)
51 3v2a_R Vascular endothelial gr 99.9 1.4E-24 4.7E-29 236.9 5.3 374 3-394 225-748 (772)
52 2y23_A Myomesin; structural pr 99.9 4.2E-22 1.4E-26 192.1 21.9 255 9-306 8-310 (312)
53 1itb_B Type 1 interleukin-1 re 99.9 5.8E-23 2E-27 198.3 14.3 255 9-307 12-313 (315)
54 1z7z_I Intercellular adhesion 99.9 2.3E-21 7.8E-26 197.1 26.5 396 8-492 5-439 (450)
55 2ibg_A CG9211-PA, GH03927P; IH 99.9 1.3E-21 4.6E-26 176.9 21.7 190 311-502 3-210 (214)
56 2ec8_A MAST/stem cell growth f 99.9 2.3E-23 7.9E-28 216.1 11.3 294 1-314 114-516 (524)
57 3qs9_E FL cytokine receptor; i 99.9 3.4E-22 1.2E-26 205.0 19.0 271 11-308 148-510 (527)
58 3f7q_A Integrin beta-4, GP150; 99.9 4.6E-22 1.6E-26 182.3 17.5 180 309-497 5-191 (234)
59 2o26_X MAST/stem cell growth f 99.9 5.7E-22 1.9E-26 188.8 18.5 253 1-310 12-290 (290)
60 3v2a_R Vascular endothelial gr 99.9 2.3E-24 8E-29 235.1 0.4 294 10-313 338-761 (772)
61 1cfb_A Drosophila neuroglian; 99.9 4.6E-21 1.6E-25 172.0 21.8 185 306-496 2-194 (205)
62 3oq3_B IFN-alpha/beta binding 99.9 7.1E-22 2.4E-26 191.6 17.5 251 9-306 36-328 (329)
63 1bih_A Hemolin; insect immunit 99.9 8.3E-22 2.8E-26 196.9 18.0 252 9-306 107-394 (395)
64 2rcj_C Light chain; immunoglob 99.9 2.4E-21 8.3E-26 200.9 21.6 284 1-295 114-511 (523)
65 2v5m_A Dscam; neurobiology SPL 99.9 1E-21 3.4E-26 195.7 18.0 251 2-306 104-387 (388)
66 3p3y_A Neurofascin; IG domains 99.9 2.1E-21 7.2E-26 194.5 19.3 255 2-308 116-403 (404)
67 3vh8_G Killer cell immunoglobu 99.9 1.6E-21 5.6E-26 188.0 17.6 251 1-297 24-297 (316)
68 1qgc_4 Protein (immunoglobulin 99.9 1E-20 3.5E-25 191.7 23.3 340 7-392 6-429 (438)
69 2dtg_E Insulin receptor; IR ec 99.9 5.5E-22 1.9E-26 216.3 14.7 237 317-600 475-835 (897)
70 3l5i_A Interleukin-6 receptor 99.9 9.1E-21 3.1E-25 180.3 21.4 212 324-601 22-242 (290)
71 3mjg_X Beta-type platelet-deri 99.9 4.8E-21 1.6E-25 182.3 19.3 257 2-314 1-284 (289)
72 3r8q_A Fibronectin; heparin, F 99.9 8.7E-20 3E-24 173.5 27.9 213 265-494 67-283 (290)
73 1tdq_A Tenascin-R; extracellul 99.9 1.2E-19 4.1E-24 171.9 28.7 214 265-496 61-278 (283)
74 3ejj_X Macrophage colony-stimu 99.9 8.2E-21 2.8E-25 180.7 20.6 258 1-310 4-283 (289)
75 1z7z_I Intercellular adhesion 99.9 4.8E-21 1.7E-25 194.7 19.8 318 1-393 85-440 (450)
76 3p4l_A Neogenin; iron homeosta 99.9 6.4E-21 2.2E-25 171.9 18.3 187 309-502 4-202 (211)
77 3l5i_A Interleukin-6 receptor 99.9 8.5E-21 2.9E-25 180.6 20.1 212 275-498 64-284 (290)
78 3rjd_A High affinity immunoglo 99.9 6.4E-21 2.2E-25 178.6 18.8 231 1-298 1-249 (262)
79 3kld_A Contactin 4, axcam, BIG 99.9 1.8E-21 6.1E-26 193.1 15.5 297 75-393 42-374 (384)
80 2a38_A Titin; Z1Z2, structural 99.9 7E-21 2.4E-25 169.4 16.6 130 173-306 64-193 (194)
81 3mtr_A N-CAM-1, NCAM-1, neural 99.9 1.1E-19 3.9E-24 164.3 23.1 179 213-395 17-202 (215)
82 1i1r_A GP130, interleukin-6 re 99.9 1.6E-19 5.4E-24 172.7 25.2 136 270-407 156-301 (303)
83 3o4o_C Interleukin-1 receptor 99.9 2.3E-22 7.7E-27 196.3 5.0 264 2-305 19-332 (339)
84 4dep_C Interleukin-1 receptor 99.8 6.8E-22 2.3E-26 193.8 7.6 268 7-308 12-333 (349)
85 2j8h_A Titin, connectin; cardi 99.8 2.7E-20 9.2E-25 166.0 17.1 133 173-307 63-196 (197)
86 2wng_A Tyrosine-protein phosph 99.8 1.2E-20 4.2E-25 182.8 15.8 242 7-298 8-309 (327)
87 3fl7_A Ephrin receptor; ATP-bi 99.8 4.4E-21 1.5E-25 192.7 12.5 215 281-502 304-531 (536)
88 1bqu_A Protein (GP130); cytoki 99.8 3.1E-20 1E-24 168.0 15.9 196 307-510 5-208 (215)
89 2rik_A Titin; I-SET IG fold, p 99.8 1.7E-18 5.6E-23 164.3 27.7 256 93-393 17-275 (284)
90 3u83_A Poliovirus receptor-rel 99.8 1.4E-20 4.8E-25 183.0 12.9 279 1-313 13-325 (331)
91 4dkd_C Macrophage colony-stimu 99.8 3.3E-20 1.1E-24 176.9 14.5 259 1-312 4-285 (292)
92 2yd1_A Tyrosine-protein phosph 99.8 1.6E-19 5.5E-24 162.9 17.4 134 173-313 65-205 (212)
93 2yd6_A PTPRD protein; hydrolas 99.8 3.9E-19 1.3E-23 160.4 18.8 134 173-310 64-206 (212)
94 3lcy_A Titin; A-BAND, IG tande 99.8 4.8E-19 1.6E-23 157.9 18.6 187 1-308 7-196 (197)
95 1qr4_A Protein (tenascin); fib 99.8 7.2E-19 2.4E-23 154.9 19.3 172 307-495 4-176 (186)
96 1cs6_A Axonin-1; neural cell a 99.8 3E-19 1E-23 177.3 17.7 297 75-393 41-373 (382)
97 2c5d_C AXL oncogene, tyrosine- 99.8 1.1E-18 3.7E-23 155.2 19.2 121 173-306 69-191 (195)
98 2gee_A Hypothetical protein; f 99.8 1.5E-18 5.1E-23 154.9 18.5 172 309-495 23-197 (203)
99 2wv3_A Neuroplastin; igcam, me 99.8 2.6E-18 8.7E-23 152.1 20.0 85 223-307 99-189 (190)
100 2iep_A Muscle-specific kinase 99.8 3E-19 1E-23 158.5 13.5 85 223-310 107-192 (192)
101 2ha1_A Fibronectin; beta sandw 99.8 5E-19 1.7E-23 158.0 14.8 175 313-495 3-194 (201)
102 3rbs_A Myomesin-1; immunoglobu 99.8 1.2E-18 4E-23 155.6 16.6 88 215-306 117-205 (207)
103 3lb6_C IL-13, interleukin-13 r 99.8 1.9E-18 6.3E-23 169.3 19.1 266 283-607 8-287 (380)
104 3se4_A Interferon alpha/beta r 99.8 1.6E-18 5.6E-23 172.9 19.0 265 271-601 64-357 (414)
105 2v9r_A Roundabout homolog 1; p 99.8 1.3E-18 4.6E-23 157.0 16.4 135 173-315 73-209 (212)
106 2oz4_A Intercellular adhesion 99.8 4.3E-19 1.5E-23 166.3 13.4 223 12-308 13-264 (265)
107 3s98_A Interferon alpha/beta r 99.8 3.7E-19 1.3E-23 169.2 12.8 227 311-606 5-254 (306)
108 1cfb_A Drosophila neuroglian; 99.8 3.8E-18 1.3E-22 152.8 18.8 152 407-609 3-159 (205)
109 3qs7_E FL cytokine receptor; i 99.8 8.8E-19 3E-23 174.9 15.3 277 87-393 104-405 (423)
110 3se4_A Interferon alpha/beta r 99.8 5E-18 1.7E-22 169.5 20.5 328 137-503 36-408 (414)
111 3lpw_A A77-A78 domain from tit 99.8 3.9E-18 1.3E-22 151.9 17.8 149 408-607 4-153 (197)
112 2vr9_A Roundabout 1, ROBO; imm 99.8 1.8E-18 6E-23 156.8 15.5 126 175-308 72-206 (217)
113 1wio_A CD4, T-cell surface gly 99.8 6.8E-19 2.3E-23 173.2 13.8 221 12-306 106-361 (363)
114 4fa8_A Secreted protein BARF1; 99.8 3.9E-19 1.3E-23 157.7 10.7 123 171-300 68-194 (203)
115 2va4_A NCAM2, N-CAM 2, neural 99.8 5.9E-18 2E-22 150.1 18.5 182 1-306 2-191 (192)
116 1cd9_B G-CSF-R, protein (G-CSF 99.8 1E-17 3.5E-22 151.2 19.6 190 309-506 4-212 (215)
117 3e0g_A Leukemia inhibitory fac 99.8 2.2E-17 7.6E-22 163.4 23.0 293 182-499 162-473 (483)
118 1igt_B IGG2A intact antibody - 99.8 1.1E-18 3.7E-23 176.9 13.9 264 7-304 5-337 (444)
119 1qgc_4 Protein (immunoglobulin 99.8 2.3E-19 8E-24 181.7 8.9 263 15-302 129-433 (438)
120 2d9q_B Granulocyte colony-stim 99.8 1.8E-17 6.2E-22 159.0 21.6 134 276-411 166-311 (313)
121 2dtg_E Insulin receptor; IR ec 99.8 3.1E-19 1.1E-23 194.6 9.6 229 271-503 548-887 (897)
122 1iga_A IGA1; immunoglobulin; N 99.8 1E-16 3.4E-21 163.7 26.8 301 7-334 6-375 (475)
123 2vkw_A Neural cell adhesion mo 99.8 3.1E-18 1E-22 154.0 13.7 147 407-605 6-156 (209)
124 3grw_A Fibroblast growth facto 99.8 5.1E-18 1.7E-22 156.6 15.4 142 173-317 73-227 (241)
125 1rhf_A Tyrosine-protein kinase 99.8 1.8E-17 6.1E-22 145.5 17.9 119 173-306 61-181 (182)
126 3ojm_B Fibroblast growth facto 99.8 8.1E-18 2.8E-22 154.1 16.1 140 173-315 77-228 (231)
127 2v5t_A NCAM2, N-CAM 2, neural 99.8 5.3E-18 1.8E-22 149.9 14.3 81 225-307 107-187 (189)
128 3n06_B PRL-R, prolactin recept 99.8 2.8E-17 9.7E-22 147.6 18.7 184 308-500 2-200 (210)
129 2wqr_A IG epsilon chain C regi 99.8 3.5E-18 1.2E-22 165.1 11.9 249 1-297 7-309 (323)
130 2r15_A Myomesin-1; sarcomeric 99.7 4.5E-17 1.5E-21 146.9 18.3 93 216-308 117-210 (212)
131 3k0w_A Mucosa-associated lymph 99.7 3.1E-17 1.1E-21 148.4 16.8 185 2-310 19-204 (218)
132 3s97_C Contactin-1; carbonic a 99.7 2.4E-17 8.2E-22 147.3 15.9 189 2-307 8-200 (201)
133 2ibg_A CG9211-PA, GH03927P; IH 99.7 2.8E-17 9.6E-22 148.3 15.2 155 410-610 2-170 (214)
134 2v44_A NCAM2, neural cell adhe 99.7 4.6E-17 1.6E-21 143.9 16.2 124 173-305 59-184 (189)
135 1epf_A NCAM, protein (neural c 99.7 2.3E-17 7.9E-22 146.1 13.9 124 173-305 63-188 (191)
136 3bpo_C Interleukin-13 receptor 99.7 1.1E-16 3.6E-21 153.6 19.0 234 311-606 5-247 (314)
137 1n26_A IL-6 receptor alpha cha 99.7 2.5E-15 8.7E-20 144.7 27.8 135 272-407 155-297 (325)
138 1f97_A Junction adhesion molec 99.7 1.1E-16 3.6E-21 144.5 16.8 132 172-308 65-207 (212)
139 3p2t_A Leukocyte immunoglobuli 99.7 1.1E-16 3.9E-21 142.1 16.5 120 173-296 59-179 (196)
140 1igy_B IGG1 intact antibody MA 99.7 6.7E-19 2.3E-23 177.7 2.1 268 6-299 3-322 (434)
141 3sgj_C Human FCG3A receptor; r 99.7 8.5E-17 2.9E-21 143.4 14.3 170 2-314 8-180 (204)
142 3f7q_A Integrin beta-4, GP150; 99.7 7E-17 2.4E-21 147.7 14.0 139 408-602 4-143 (234)
143 3p4l_A Neogenin; iron homeosta 99.7 5.9E-17 2E-21 145.8 12.9 142 408-601 3-151 (211)
144 2d3v_A Leukocyte immunoglobuli 99.7 6.1E-17 2.1E-21 143.8 12.5 120 173-296 59-180 (196)
145 1hzh_H IGG, immunoglobulin hea 99.7 9.3E-17 3.2E-21 163.2 15.6 268 8-301 6-343 (457)
146 3bpo_C Interleukin-13 receptor 99.7 1.4E-15 4.6E-20 145.9 22.4 222 274-504 55-309 (314)
147 1za6_B IGG heavy chain; immuno 99.7 5.9E-17 2E-21 157.9 12.9 271 6-297 4-330 (344)
148 2x1w_L Vascular endothelial gr 99.7 1.3E-16 4.3E-21 143.8 14.1 136 173-311 65-210 (213)
149 1uct_A Immunoglobulin alpha FC 99.7 1.6E-16 5.6E-21 143.0 14.2 116 173-295 65-180 (218)
150 1igt_B IGG2A intact antibody - 99.7 2.9E-17 1E-21 166.3 10.1 241 14-295 135-432 (444)
151 1fnl_A Low affinity immunoglob 99.7 3.4E-16 1.2E-20 136.1 14.8 165 1-308 7-174 (175)
152 4f80_A Butyrophilin subfamily 99.7 4.4E-16 1.5E-20 141.8 15.6 129 171-308 82-213 (226)
153 1ugn_A LIR1, leukocyte immunog 99.7 4.2E-16 1.4E-20 138.6 14.9 120 173-296 59-181 (198)
154 1f2q_A High affinity immunoglo 99.7 2.2E-16 7.7E-21 137.4 12.8 168 1-311 4-174 (176)
155 1igy_B IGG1 intact antibody MA 99.7 2.7E-17 9.2E-22 166.0 8.0 251 2-296 120-423 (434)
156 1qr4_A Protein (tenascin); fib 99.7 3.5E-16 1.2E-20 137.5 13.7 137 408-607 5-141 (186)
157 2yd9_A Receptor-type tyrosine- 99.7 7.5E-16 2.6E-20 147.4 16.9 252 93-393 18-282 (304)
158 2fbo_J V1V2;, variable region- 99.7 6.6E-16 2.3E-20 143.2 16.1 127 171-298 89-239 (250)
159 2ifg_A High affinity nerve gro 99.7 1.7E-16 5.9E-21 154.6 12.5 127 173-310 213-347 (347)
160 4go6_B HCF C-terminal chain 1; 99.7 2.3E-16 7.7E-21 143.4 12.3 154 339-496 19-193 (232)
161 3mtr_A N-CAM-1, NCAM-1, neural 99.7 1.8E-16 6.1E-21 143.2 11.6 162 1-202 19-203 (215)
162 2ghw_B Anti-SARS SCFV antibody 99.7 2E-15 6.8E-20 139.6 18.9 135 171-307 80-241 (247)
163 4frw_A Poliovirus receptor-rel 99.7 2.6E-16 8.8E-21 142.5 12.6 131 171-306 78-209 (218)
164 1iga_A IGA1; immunoglobulin; N 99.7 1.3E-15 4.4E-20 155.5 19.2 240 15-297 139-443 (475)
165 3bp6_B Programmed cell death 1 99.7 1.6E-16 5.5E-21 141.9 10.8 127 173-309 68-194 (202)
166 2gys_A Cytokine receptor commo 99.7 1.1E-15 3.7E-20 152.8 17.8 262 277-604 77-366 (419)
167 2gi7_A GPVI protein; IG-like d 99.7 3.1E-16 1.1E-20 137.5 11.9 65 227-296 104-168 (184)
168 1nbq_A JAM, junctional adhesio 99.7 1.2E-16 4.1E-21 143.7 9.4 122 172-298 68-197 (209)
169 1oll_A NK receptor; immune sys 99.7 1.6E-15 5.4E-20 133.5 16.0 115 173-295 58-172 (188)
170 3b5h_A Cervical EMMPRIN, HAB18 99.7 9.1E-15 3.1E-19 128.3 20.7 84 224-307 91-182 (184)
171 1zvo_C Myeloma immunoglobulin 99.7 2.6E-14 8.8E-19 146.7 26.5 276 5-299 3-388 (512)
172 3d85_D IL-12B, interleukin-12 99.7 3.1E-15 1.1E-19 141.3 18.1 245 229-499 19-302 (306)
173 2gee_A Hypothetical protein; f 99.7 1E-15 3.4E-20 136.5 14.0 139 408-607 22-162 (203)
174 3r4d_A CEA-related cell adhesi 99.7 2E-15 6.9E-20 135.5 16.1 131 173-311 72-203 (208)
175 2wim_A N-CAM 2, NCAM2, neural 99.7 1.3E-14 4.3E-19 137.9 22.3 252 93-394 16-276 (291)
176 1f3r_B FV antibody fragment; I 99.6 1.1E-15 3.9E-20 142.0 14.1 138 171-310 77-247 (257)
177 2ny1_B T-cell surface glycopro 99.6 1.4E-15 4.7E-20 133.5 13.7 118 171-313 67-184 (184)
178 3uzq_A Anti-dengue MAB 4E11; d 99.6 2.4E-15 8E-20 139.5 15.9 141 171-314 79-250 (253)
179 2y25_A Myomesin; structural pr 99.6 6.4E-16 2.2E-20 148.9 12.5 250 93-392 18-305 (317)
180 3fl7_A Ephrin receptor; ATP-bi 99.6 7.9E-16 2.7E-20 154.6 13.3 169 376-601 305-484 (536)
181 1qz1_A Neural cell adhesion mo 99.6 1.7E-15 5.9E-20 143.9 14.8 252 93-392 14-280 (291)
182 1nqb_A Single-chain antibody f 99.6 9.7E-15 3.3E-19 135.4 19.5 133 171-307 78-232 (256)
183 3gkz_A Anti-methamphetamine si 99.6 8.6E-15 2.9E-19 136.1 19.0 141 172-313 86-254 (257)
184 1vca_A VCAM-D1,2, human vascul 99.6 3.2E-15 1.1E-19 132.9 14.8 131 173-310 55-199 (202)
185 3rjd_A High affinity immunoglo 99.6 2.5E-14 8.7E-19 133.5 21.7 233 93-392 13-249 (262)
186 1bqu_A Protein (GP130); cytoki 99.6 6.1E-16 2.1E-20 139.6 10.1 148 408-608 6-156 (215)
187 1hzh_H IGG, immunoglobulin hea 99.6 4E-16 1.4E-20 158.5 9.7 238 13-296 143-442 (457)
188 3vh8_G Killer cell immunoglobu 99.6 3.5E-14 1.2E-18 136.5 22.5 259 93-403 35-309 (316)
189 2y23_A Myomesin; structural pr 99.6 5.7E-15 2E-19 141.9 16.7 241 135-393 28-303 (312)
190 2ha1_A Fibronectin; beta sandw 99.6 2.9E-15 9.8E-20 133.5 13.6 145 412-604 2-155 (201)
191 3ry4_A Low affinity immunoglob 99.6 4.8E-15 1.6E-19 128.2 14.6 73 226-306 95-169 (170)
192 1p6f_A NKP46, natural cytotoxi 99.6 9.5E-15 3.2E-19 133.5 16.7 134 173-314 61-197 (242)
193 3mj8_L Stimulatory hamster ant 99.6 2.2E-15 7.4E-20 135.9 12.1 129 171-300 69-205 (213)
194 1qok_A MFE-23 recombinant anti 99.6 2E-14 6.7E-19 135.5 19.2 135 171-307 104-267 (282)
195 3d9a_L Light chain of hyhel10 99.6 2.1E-15 7.2E-20 135.9 11.8 125 172-299 71-204 (213)
196 3juy_B 3B3 single chain varian 99.6 2.5E-14 8.4E-19 132.9 18.8 124 171-296 84-244 (256)
197 2p1y_A Bispecific alpha/beta T 99.6 1.9E-14 6.6E-19 132.1 17.7 124 171-295 72-222 (238)
198 2crm_A Fibronectin type-III do 99.6 1.2E-14 4.2E-19 117.0 14.3 105 398-504 6-113 (120)
199 3lb6_C IL-13, interleukin-13 r 99.6 2.9E-14 9.8E-19 139.6 19.6 201 277-488 93-313 (380)
200 1ry7_B FGFR-3, fibroblast grow 99.6 2.4E-15 8.3E-20 146.0 11.6 255 92-393 19-318 (334)
201 3umt_A SCFV heavy chain and li 99.6 2.4E-14 8.2E-19 133.0 17.7 137 172-310 81-247 (256)
202 1nkr_A P58-CL42 KIR; inhibitor 99.6 2.1E-14 7.3E-19 127.8 16.6 116 173-294 64-183 (201)
203 4i0k_A CD276 antigen; immunogl 99.6 1.1E-14 3.7E-19 132.2 14.9 135 171-311 71-209 (222)
204 1bpv_A Titin, A71, connectin; 99.6 9.8E-16 3.3E-20 120.5 6.8 97 408-504 9-107 (112)
205 2ed9_A Netrin receptor DCC; tu 99.6 3.7E-15 1.3E-19 121.0 10.4 115 382-501 3-120 (124)
206 3nl4_L Antigen binding fragmen 99.6 7.1E-15 2.4E-19 132.4 13.3 120 172-292 71-198 (213)
207 1lk3_L 9D7 light chain; antige 99.6 6.6E-15 2.3E-19 132.3 12.9 124 172-298 70-202 (210)
208 3jz7_A MCAR, CAR, coxsackievir 99.6 1.2E-15 4.1E-20 137.7 8.1 129 170-309 82-213 (214)
209 3ejj_X Macrophage colony-stimu 99.6 3.9E-14 1.3E-18 134.3 18.6 211 169-393 48-272 (289)
210 1jbj_A CD3 epsilon and gamma e 99.6 6.2E-15 2.1E-19 129.2 11.9 61 228-298 119-179 (186)
211 1x5y_A Myosin binding protein 99.6 7.5E-15 2.6E-19 116.3 11.2 100 406-505 5-105 (111)
212 3auv_A SC-DSFV derived from th 99.6 2.7E-14 9.2E-19 134.1 16.7 137 172-310 82-256 (276)
213 1x3d_A Fibronectin type-III do 99.6 1.5E-14 5.2E-19 116.1 12.6 107 398-507 6-114 (118)
214 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 5.2E-14 1.8E-18 130.6 18.0 125 171-297 75-235 (256)
215 3s98_A Interferon alpha/beta r 99.6 2E-14 6.8E-19 136.5 15.2 214 274-502 63-300 (306)
216 1wfo_A Sidekick 2; FN3, cell a 99.6 3.7E-15 1.3E-19 122.1 8.6 116 383-501 3-120 (130)
217 2yuw_A Myosin binding protein 99.6 1.3E-14 4.4E-19 114.8 11.5 99 407-505 5-104 (110)
218 2q7n_A Leukemia inhibitory fac 99.6 4.6E-14 1.6E-18 141.0 18.1 129 273-406 348-485 (488)
219 3sbw_C Programmed cell death 1 99.6 1.3E-14 4.4E-19 131.7 12.9 132 171-310 79-213 (222)
220 1moe_A Anti-CEA MAB T84.66; an 99.6 1.4E-14 4.7E-19 133.3 13.2 120 172-293 75-219 (240)
221 1x4z_A Biregional cell adhesio 99.6 5.2E-14 1.8E-18 113.4 15.0 102 403-505 11-115 (121)
222 2crz_A Fibronectin type-III do 99.6 8.8E-15 3E-19 115.7 10.2 103 406-510 5-109 (110)
223 3knb_B Obscurin-like protein 1 99.6 1.3E-14 4.4E-19 113.4 10.7 96 214-310 12-107 (107)
224 1b6u_A KIR2DL3, P58 killer cel 99.6 4.6E-14 1.6E-18 129.9 15.7 133 173-311 63-204 (257)
225 3mj6_A Junctional adhesion mol 99.6 2.2E-14 7.4E-19 134.4 13.6 130 170-309 82-238 (268)
226 3oq3_B IFN-alpha/beta binding 99.6 2.2E-14 7.4E-19 138.8 13.8 231 137-392 66-320 (329)
227 3esu_F Antibody 14B7* light ch 99.6 4.5E-14 1.5E-18 130.7 15.4 71 223-293 138-231 (250)
228 1itb_B Type 1 interleukin-1 re 99.6 7.2E-15 2.5E-19 141.4 10.1 210 172-393 62-305 (315)
229 2edx_A Protein tyrosine phosph 99.6 2.5E-14 8.7E-19 117.9 11.8 103 398-500 6-113 (134)
230 2pet_A Lutheran blood group gl 99.6 1.3E-14 4.6E-19 132.5 11.0 118 173-294 78-211 (231)
231 1dr9_A B7-1 (CD80), T lymphocy 99.6 5E-14 1.7E-18 125.5 14.3 128 171-303 64-196 (201)
232 1x4x_A Fibronectin type-III do 99.6 2.7E-14 9.2E-19 111.8 11.0 94 406-502 4-97 (106)
233 4dep_C Interleukin-1 receptor 99.6 1.2E-14 4.1E-19 142.0 11.1 212 171-393 78-324 (349)
234 1v5j_A KIAA1355 protein, RSGI 99.6 1E-14 3.5E-19 112.7 8.4 94 408-503 6-100 (108)
235 1hng_A CD2; T lymphocyte adhes 99.6 1.7E-15 5.7E-20 131.4 4.4 111 173-304 62-172 (176)
236 2o26_X MAST/stem cell growth f 99.5 8.1E-14 2.8E-18 132.2 16.3 204 172-392 57-278 (290)
237 3knb_A Titin; IG-like, titin, 99.5 1.1E-14 3.8E-19 112.3 8.3 86 1-115 5-92 (100)
238 1wis_A KIAA1514 protein; FNIII 99.5 3.4E-14 1.2E-18 114.9 11.5 106 399-505 7-118 (124)
239 2zg1_A Sialic acid-binding IG- 99.5 9E-14 3.1E-18 125.3 15.5 124 171-304 81-209 (214)
240 2ee2_A Contactin-1; neural cel 99.5 8.3E-14 2.8E-18 111.9 13.7 104 398-504 6-112 (119)
241 3omz_A Human vdelta1 gamma del 99.5 1.2E-13 4E-18 128.6 16.5 124 170-294 77-231 (259)
242 3lqm_A Interleukin-10 receptor 99.5 1.1E-13 3.6E-18 122.4 15.2 178 313-503 5-194 (201)
243 3knb_B Obscurin-like protein 1 99.5 6.9E-15 2.3E-19 115.0 6.7 86 1-115 13-98 (107)
244 1x5x_A Fibronectin type-III do 99.5 2.9E-14 9.8E-19 112.5 10.1 96 407-504 5-102 (109)
245 3s96_B 3B5H10 FAB light chain; 99.5 2.2E-14 7.6E-19 129.7 10.6 127 171-299 74-211 (218)
246 3r06_A Anti-mouse CD3epsilon a 99.5 2.5E-14 8.4E-19 128.9 10.7 125 171-298 70-203 (213)
247 1wfn_A Sidekick 2; FN3, cell a 99.5 2.9E-14 1E-18 114.6 9.9 100 398-498 6-106 (119)
248 3pv7_A B7-H6, IG-like domain-c 99.5 1.7E-13 5.8E-18 126.6 16.2 129 170-306 80-224 (248)
249 1c1e_H Catalytic antibody 1E9 99.5 3.6E-14 1.2E-18 128.3 11.5 127 172-301 79-213 (219)
250 2haz_A N-CAM 1, neural cell ad 99.5 1.5E-14 5.3E-19 113.0 7.7 94 407-501 4-101 (105)
251 2c1o_A IGK-C protein; FAB frag 99.5 3.4E-14 1.2E-18 131.9 11.3 124 172-298 113-245 (254)
252 4fmk_A Poliovirus receptor-rel 99.5 5.6E-14 1.9E-18 127.7 12.4 130 170-305 81-214 (225)
253 2znx_A SCFV; fluorotryptohpan, 99.5 1.7E-13 5.8E-18 125.9 15.2 119 173-294 72-222 (242)
254 2gys_A Cytokine receptor commo 99.5 1.7E-12 5.9E-17 129.6 23.6 212 276-502 175-415 (419)
255 1sy6_A T-cell surface glycopro 99.5 7.4E-14 2.5E-18 124.2 12.2 71 229-304 126-200 (204)
256 3ux9_B SCFV antibody; five hel 99.5 2.4E-13 8.3E-18 126.2 16.1 72 224-295 142-236 (256)
257 3sob_L Antibody light chain; b 99.5 4.5E-14 1.5E-18 129.5 10.7 127 171-300 93-228 (237)
258 1nfd_E H57 FAB; complex (immun 99.5 7.7E-15 2.6E-19 132.1 5.5 124 172-297 69-201 (212)
259 2gki_A Nuclease; anti-DNA anti 99.5 5E-13 1.7E-17 126.4 18.1 138 171-310 100-274 (291)
260 1x5f_A Neogenin; RGM binding, 99.5 8.1E-14 2.8E-18 112.3 10.9 102 400-502 8-111 (120)
261 1mju_H Immunoglobulin MS6-12; 99.5 9.1E-14 3.1E-18 126.2 12.3 137 171-313 78-222 (227)
262 3tv3_L PGT128 light chain, IG 99.5 4.6E-14 1.6E-18 126.8 10.2 127 171-299 67-202 (211)
263 2yrz_A Integrin beta-4; GP150, 99.5 7.8E-14 2.7E-18 112.0 10.4 108 399-510 7-115 (118)
264 1x5i_A Neogenin; RGM binding, 99.5 2.2E-13 7.6E-18 110.2 13.1 104 388-497 3-112 (126)
265 2cqv_A MLCK, myosin light chai 99.5 3.9E-13 1.3E-17 107.1 14.3 102 214-316 6-107 (114)
266 1wf5_A Sidekick 2 protein; FNI 99.5 1E-13 3.5E-18 111.9 10.8 96 408-504 16-114 (121)
267 3v6o_A Leptin receptor; recept 99.5 1.9E-12 6.4E-17 115.0 19.9 179 317-502 7-203 (206)
268 1uey_A KIAA0343 protein; immun 99.5 1.8E-13 6.3E-18 111.3 12.3 95 408-504 15-112 (127)
269 4dkd_C Macrophage colony-stimu 99.5 3.4E-14 1.2E-18 135.0 9.3 208 170-392 49-271 (292)
270 1zvo_C Myeloma immunoglobulin 99.5 2.3E-12 8E-17 132.2 23.4 118 173-298 362-493 (512)
271 1q9r_B S25-2 FAB (IGG1K) heavy 99.5 2.5E-13 8.4E-18 123.1 14.1 129 171-302 80-217 (222)
272 2xzc_L FAB A.17 light chain; i 99.5 1.7E-13 5.9E-18 123.6 12.9 126 172-299 72-206 (216)
273 1axi_B HGHBP, growth hormone r 99.5 7.9E-14 2.7E-18 126.5 10.6 179 308-497 28-228 (236)
274 2e7h_A Ephrin type-B receptor 99.5 1.3E-13 4.4E-18 108.7 10.5 95 405-503 3-101 (109)
275 2e3v_A Neural cell adhesion mo 99.5 6.3E-14 2.2E-18 112.8 8.9 106 407-513 5-115 (122)
276 3knb_A Titin; IG-like, titin, 99.5 2.8E-13 9.5E-18 104.4 12.1 94 214-308 4-99 (100)
277 1svz_A Immunoglobulin;, single 99.5 2.4E-13 8.3E-18 125.4 14.0 119 173-294 77-228 (247)
278 2ed7_A Netrin receptor DCC; tu 99.5 2.5E-13 8.7E-18 109.2 12.4 99 403-502 11-110 (119)
279 2ic2_A CG9211-PA, GH03927P; IH 99.5 9.3E-14 3.2E-18 109.8 9.5 94 408-505 4-110 (115)
280 4fom_A Poliovirus receptor-rel 99.5 3.8E-14 1.3E-18 135.8 8.8 215 170-393 72-291 (308)
281 1x5g_A Neogenin; RGM binding, 99.5 3.7E-13 1.3E-17 107.6 13.1 104 398-505 4-110 (116)
282 4dzb_B Vbeta2 (MAIT T cell rec 99.5 2.3E-13 7.9E-18 125.5 13.5 128 171-298 76-221 (246)
283 2wng_A Tyrosine-protein phosph 99.5 1.9E-12 6.5E-17 125.0 20.5 215 169-392 71-309 (327)
284 1x5h_A Neogenin; RGM binding, 99.5 3.2E-14 1.1E-18 116.9 6.8 107 398-504 6-115 (132)
285 2e7c_A Myosin-binding protein 99.5 8E-13 2.7E-17 105.9 14.7 114 196-310 2-117 (118)
286 3o4o_C Interleukin-1 receptor 99.5 7.1E-14 2.4E-18 135.9 10.2 244 135-394 51-327 (339)
287 2djs_A Ephrin type-B receptor 99.5 9.7E-14 3.3E-18 109.3 9.0 96 405-502 3-99 (108)
288 2kbg_A N-CAM 2, neural cell ad 99.5 6.3E-14 2.2E-18 109.3 7.7 87 408-496 7-94 (114)
289 1wfu_A Unnamed protein product 99.5 1.3E-13 4.5E-18 108.9 9.5 96 408-505 14-114 (120)
290 1q0x_L FAB 9B1, light chain; a 99.5 1.8E-13 6.1E-18 123.1 11.6 123 172-297 73-204 (212)
291 1dee_B IGM RF 2A2; FAB-IBP com 99.5 2E-12 6.9E-17 117.0 18.5 128 171-300 78-219 (223)
292 1va9_A DOWN syndrome cell adhe 99.5 1.3E-13 4.5E-18 111.5 9.3 108 398-505 3-117 (122)
293 3m8o_H Immunoglobulin A1 heavy 99.5 1.2E-12 4.2E-17 118.3 16.7 120 171-298 80-213 (221)
294 3fku_X Neutralizing antibody F 99.5 1.9E-12 6.7E-17 121.5 18.4 137 171-310 78-252 (280)
295 2if7_A SLAM family member 6; N 99.5 4E-13 1.4E-17 118.4 12.9 113 171-300 69-184 (193)
296 3bkj_L WO2 IGG2A FAB fragment 99.5 1.8E-13 6.1E-18 126.7 11.2 124 172-298 109-241 (252)
297 1x5z_A Receptor-type tyrosine- 99.5 8E-14 2.7E-18 111.4 7.4 103 398-505 6-109 (115)
298 2yux_A Myosin-binding protein 99.5 2.2E-13 7.4E-18 109.4 9.9 94 408-502 16-110 (120)
299 3d9a_H Heavy chain of hyhel10 99.5 1.8E-13 6E-18 122.9 10.4 123 172-300 78-206 (210)
300 2fbj_H IGA-kappa J539 FAB (hea 99.5 5.4E-13 1.8E-17 120.5 13.5 126 171-299 78-212 (220)
301 3q5y_A TCR N15 beta; IG, T cel 99.5 6E-13 2.1E-17 122.2 13.9 128 171-298 74-214 (240)
302 1x5l_A Ephrin type-A receptor 99.5 1.1E-13 3.6E-18 109.8 7.6 99 403-502 4-102 (111)
303 2gjj_A A21 single-chain antibo 99.5 6.9E-13 2.4E-17 123.4 14.4 70 225-294 147-239 (264)
304 2edb_A Netrin receptor DCC; tu 99.5 4.3E-13 1.5E-17 106.7 10.7 91 404-497 11-102 (116)
305 2dlh_A Receptor-type tyrosine- 99.4 1.1E-13 3.7E-18 111.8 7.0 110 398-510 6-120 (121)
306 4fqp_A Poliovirus receptor; im 99.4 1.3E-12 4.4E-17 125.4 15.8 211 170-392 77-294 (313)
307 2vol_A Murine IGG FC; FC, zinc 99.4 2.8E-13 9.4E-18 121.1 10.1 120 173-296 69-196 (207)
308 3bqu_C 3H6 FAB light chain; be 99.4 6E-14 2.1E-18 128.3 5.9 121 173-296 94-223 (233)
309 1x9q_A SCFV, 4M5.3 anti-fluore 99.4 8.7E-13 3E-17 123.2 13.8 122 173-294 91-254 (268)
310 3t04_D Monobody 7C12; engineer 99.4 2E-12 6.8E-17 100.2 13.5 88 408-497 6-96 (103)
311 1pz5_B Heavy chain of FAB (SYA 99.4 5.4E-13 1.8E-17 120.7 11.9 122 172-301 81-214 (220)
312 2rgs_A I, IG gamma-2B heavy ch 99.4 1.2E-13 4E-18 124.6 7.4 121 173-297 77-205 (218)
313 1wk0_A KIAA0970 protein; fibro 99.4 5.7E-13 2E-17 107.2 10.4 95 408-504 16-120 (137)
314 2dm4_A Sortilin-related recept 99.4 3.9E-13 1.3E-17 105.8 9.3 95 407-505 5-102 (108)
315 2a38_A Titin; Z1Z2, structural 99.4 1.1E-12 3.8E-17 116.0 13.4 171 215-392 5-185 (194)
316 1uem_A KIAA1568 protein; immun 99.4 8.3E-13 2.8E-17 105.7 11.3 98 406-505 12-111 (117)
317 2dbj_A Proto-oncogene tyrosine 99.4 3.3E-13 1.1E-17 109.1 9.0 104 398-503 6-116 (124)
318 1op3_H FAB 2G12, heavy chain; 99.4 7.2E-13 2.5E-17 120.2 12.2 124 171-297 78-214 (225)
319 3u83_A Poliovirus receptor-rel 99.4 1.2E-12 4.2E-17 126.7 14.4 207 169-392 89-310 (331)
320 1x4y_A Biregional cell adhesio 99.4 6.4E-13 2.2E-17 105.6 10.2 96 408-503 7-106 (114)
321 1dn0_B IGM-kappa cold agglutin 99.4 7.9E-12 2.7E-16 113.7 18.7 133 171-305 77-224 (232)
322 1ccz_A Protein (CD58); LFA-3, 99.4 3.6E-13 1.2E-17 115.9 9.1 107 172-303 60-166 (171)
323 3liz_H 4C3 monoclonal antibody 99.4 2E-12 6.9E-17 119.5 14.6 129 171-307 78-219 (253)
324 1uen_A KIAA0343 protein; immun 99.4 5.5E-13 1.9E-17 108.3 9.4 105 399-503 3-117 (125)
325 2yd1_A Tyrosine-protein phosph 99.4 3.8E-12 1.3E-16 114.3 15.4 169 214-393 5-190 (212)
326 3bae_H WO2 IGG2A FAB fragment 99.4 1E-12 3.5E-17 119.5 11.8 126 172-300 80-218 (228)
327 2dju_A Receptor-type tyrosine- 99.4 1.2E-12 4.2E-17 102.7 10.6 93 407-504 5-99 (106)
328 1x5j_A Neogenin; RGM binding, 99.4 1.1E-12 3.7E-17 103.5 10.3 97 408-505 7-107 (113)
329 3nfj_J T cell receptor beta ch 99.4 2.7E-12 9.1E-17 118.3 14.5 128 171-298 73-220 (245)
330 3lcy_A Titin; A-BAND, IG tande 99.4 6.1E-12 2.1E-16 111.5 16.3 174 214-392 6-186 (197)
331 2j6e_L IGM, FAB light chain; a 99.4 5.4E-13 1.8E-17 122.0 9.4 124 172-298 91-225 (234)
332 2yd6_A PTPRD protein; hydrolas 99.4 1.4E-11 4.6E-16 110.6 18.5 173 214-393 5-194 (212)
333 2dn7_A Receptor-type tyrosine- 99.4 6.9E-13 2.4E-17 104.3 8.7 89 405-496 3-92 (107)
334 3eow_R Poliovirus receptor; im 99.4 8.3E-13 2.8E-17 119.5 10.4 135 170-314 76-216 (221)
335 3qht_C Monobody YSMB-1; fibron 99.4 1.3E-12 4.4E-17 100.1 9.7 86 408-497 3-89 (97)
336 1hxm_B Gamma-delta T-cell rece 99.4 5.2E-12 1.8E-16 115.9 15.6 133 171-306 79-227 (242)
337 2cqv_A MLCK, myosin light chai 99.4 1.1E-12 3.7E-17 104.5 9.4 86 1-115 7-92 (114)
338 2ed8_A Netrin receptor DCC; tu 99.4 1E-12 3.5E-17 103.0 8.8 92 407-502 5-97 (106)
339 1eer_B Epobp, erythropoietin r 99.4 3.5E-12 1.2E-16 115.3 13.5 168 312-488 23-202 (227)
340 3n1f_C Cell adhesion molecule- 99.4 1.4E-12 4.8E-17 100.7 9.3 88 410-498 5-97 (102)
341 3pl6_D MBP peptide / T-cell re 99.4 4.8E-12 1.7E-16 118.2 14.7 127 171-298 99-242 (268)
342 3n06_B PRL-R, prolactin recept 99.4 3.7E-12 1.3E-16 114.0 13.2 147 408-606 2-159 (210)
343 2c5d_C AXL oncogene, tyrosine- 99.4 2E-11 7E-16 107.9 17.8 170 215-392 2-182 (195)
344 3b83_A Ten-D3; beta sheet, com 99.4 1.5E-12 5.3E-17 100.3 9.1 84 409-496 1-85 (100)
345 1x5a_A Ephrin type-A receptor 99.4 4.1E-12 1.4E-16 99.1 11.7 92 405-502 5-98 (107)
346 2ede_A Netrin receptor DCC; tu 99.4 3E-12 1E-16 101.9 11.2 93 408-502 7-105 (114)
347 2wbj_D OB TCR; transmembrane, 99.4 1.5E-11 5.1E-16 115.6 17.8 127 171-298 99-246 (279)
348 2edd_A Netrin receptor DCC; tu 99.4 2.1E-12 7.2E-17 103.6 10.1 93 407-502 16-114 (123)
349 2lvc_A Obscurin-like protein 1 99.4 4.9E-13 1.7E-17 100.5 5.9 79 1-109 4-84 (91)
350 4ei6_B Vbeta16 XV19 type II na 99.4 4.9E-12 1.7E-16 116.5 14.0 125 171-296 75-218 (245)
351 1c5d_H Monoclonal antibody aga 99.4 6.1E-12 2.1E-16 113.1 13.9 125 172-300 78-208 (215)
352 3e0g_A Leukemia inhibitory fac 99.4 2.6E-11 9E-16 120.1 19.5 148 408-608 280-433 (483)
353 2wv3_A Neuroplastin; igcam, me 99.4 3.9E-11 1.3E-15 105.6 18.4 166 215-392 3-180 (190)
354 2j8h_A Titin, connectin; cardi 99.4 1.6E-11 5.4E-16 108.8 15.9 172 214-392 3-187 (197)
355 1l6x_A Immunoglobulin gamma-1 99.4 7.9E-13 2.7E-17 118.1 7.4 117 176-296 72-196 (207)
356 2v44_A NCAM2, neural cell adhe 99.4 4.5E-11 1.5E-15 105.0 18.5 162 223-392 9-177 (189)
357 3nl4_H Antigen binding fragmen 99.4 1.9E-12 6.5E-17 116.5 9.8 129 170-303 73-209 (215)
358 1waa_A Titin; metal binding pr 99.4 1.3E-12 4.5E-17 98.9 7.2 79 1-109 5-83 (93)
359 1wj3_A KIAA1496 protein; beta 99.4 3.6E-12 1.2E-16 101.3 10.0 98 398-500 6-106 (117)
360 4doh_B Interleukin-20 receptor 99.4 3.3E-11 1.1E-15 106.4 17.1 176 312-500 9-196 (206)
361 2db8_A Tripartite motif protei 99.4 2.4E-12 8.2E-17 101.2 8.8 92 408-502 8-101 (110)
362 1cd9_B G-CSF-R, protein (G-CSF 99.3 5.5E-12 1.9E-16 113.4 12.2 147 408-607 3-165 (215)
363 3qp3_A Titin; I-SET IG-like, s 99.3 1.8E-12 6.3E-17 101.0 7.8 85 1-114 8-92 (103)
364 1g1c_A Immunoglobulin-like dom 99.3 2.3E-12 8E-17 99.6 8.3 86 1-114 5-90 (99)
365 3mjg_X Beta-type platelet-deri 99.3 1.4E-11 4.8E-16 116.6 15.5 206 172-394 51-270 (289)
366 2lu7_A Obscurin-like protein 1 99.3 1.3E-12 4.4E-17 96.5 6.3 72 8-108 2-73 (84)
367 3bn9_D E2 FAB heavy chain; ant 99.3 3.9E-12 1.3E-16 117.2 11.0 122 171-295 78-217 (257)
368 2oz4_A Intercellular adhesion 99.3 4.7E-12 1.6E-16 118.1 11.7 226 93-392 15-254 (265)
369 2ee3_A Collagen alpha-1(XX) ch 99.3 3.3E-12 1.1E-16 99.1 8.8 86 408-497 6-91 (108)
370 2va4_A NCAM2, N-CAM 2, neural 99.3 1.1E-11 3.8E-16 109.3 13.5 169 215-392 2-183 (192)
371 2yuz_A Myosin-binding protein 99.3 7.5E-12 2.6E-16 96.3 10.7 92 215-311 7-98 (100)
372 3qp3_A Titin; I-SET IG-like, s 99.3 1.2E-11 4.1E-16 96.3 12.0 94 215-309 8-101 (103)
373 2xqy_G A13-D6.3 monoclonal ant 99.3 9.5E-12 3.2E-16 115.1 13.3 123 172-297 85-214 (261)
374 1hnf_A CD2; T lymphocyte adhes 99.3 1.8E-11 6.1E-16 106.0 14.0 111 173-304 67-177 (182)
375 1i1c_A IGG2A, IG gamma-2A chai 99.3 1.6E-12 5.5E-17 118.6 7.6 120 173-296 83-210 (239)
376 2iep_A Muscle-specific kinase 99.3 6.3E-12 2.2E-16 110.9 11.3 168 214-392 6-179 (192)
377 2w59_A IGY FCU3-4; immunoglobu 99.3 4.9E-12 1.7E-16 115.0 10.6 119 173-297 78-217 (231)
378 3uto_A Twitchin; kinase, muscl 99.3 6.4E-12 2.2E-16 129.3 12.6 96 408-505 8-104 (573)
379 2e7c_A Myosin-binding protein 99.3 5.7E-12 2E-16 100.9 9.5 86 1-115 21-108 (118)
380 2dru_A Chimera of CD48 antigen 99.3 3.8E-12 1.3E-16 110.4 9.1 106 171-301 68-174 (180)
381 4fa8_A Secreted protein BARF1; 99.3 1.8E-12 6E-17 114.7 7.0 163 225-393 2-193 (203)
382 3qib_D 2B4 beta chain; IG doma 99.3 6.5E-12 2.2E-16 117.5 11.2 129 170-298 99-245 (270)
383 2kdg_A Myotilin; immonoglobuli 99.3 4.2E-12 1.4E-16 98.3 8.3 85 1-113 5-89 (100)
384 3irg_B Obscurin-like protein 1 99.3 1.1E-11 3.9E-16 97.3 10.7 96 214-310 12-107 (107)
385 2ckn_A Basic fibroblast growth 99.3 3.7E-12 1.3E-16 97.4 7.7 79 1-113 9-87 (95)
386 2dm2_A Palladin; beta-sandwich 99.3 1.5E-11 5.2E-16 97.0 11.4 100 214-314 7-108 (110)
387 2yuz_A Myosin-binding protein 99.3 2.8E-12 9.6E-17 98.7 6.9 77 1-108 7-83 (100)
388 1wit_A Twitchin 18TH IGSF modu 99.3 3.9E-12 1.3E-16 96.9 7.5 82 1-113 2-85 (93)
389 1g1c_A Immunoglobulin-like dom 99.3 2.4E-11 8.2E-16 93.8 12.0 94 214-308 4-98 (99)
390 1rhf_A Tyrosine-protein kinase 99.3 6.2E-11 2.1E-15 103.4 15.9 163 221-392 7-172 (182)
391 2ocf_D Fibronectin; estrogen r 99.3 5.1E-12 1.7E-16 100.7 8.1 86 408-497 27-113 (121)
392 2cuh_A Tenascin-X; fibronectin 99.3 6.4E-12 2.2E-16 99.8 8.6 82 408-494 6-87 (115)
393 3puc_A Titin; I-SET IG-like do 99.3 2.7E-11 9.3E-16 93.5 11.9 92 215-307 6-97 (99)
394 3rbs_A Myomesin-1; immunoglobu 99.3 5.4E-11 1.8E-15 105.8 15.4 165 224-393 10-198 (207)
395 3puc_A Titin; I-SET IG-like do 99.3 5.6E-12 1.9E-16 97.4 7.9 84 1-113 6-89 (99)
396 3k2m_C Monobody HA4; engineere 99.3 1.7E-11 5.8E-16 94.5 10.5 81 409-491 4-85 (101)
397 2rb8_A Tenascin; beta sheet,lo 99.3 9.3E-12 3.2E-16 96.6 9.1 83 409-496 2-86 (104)
398 3to4_D NKT vbeta2 (mouse varia 99.3 1.3E-11 4.4E-16 114.1 11.7 122 174-295 76-217 (253)
399 2lu7_A Obscurin-like protein 1 99.3 1.8E-11 6E-16 90.3 10.0 81 223-308 3-83 (84)
400 2edy_A Receptor-type tyrosine- 99.3 4.7E-12 1.6E-16 98.6 7.2 92 408-502 7-100 (103)
401 3teu_A Fibcon; FN3 domain, fib 99.3 1.5E-11 5.2E-16 94.5 10.0 82 410-495 2-84 (98)
402 2kkq_A Myotilin; unknown funct 99.3 3.5E-11 1.2E-15 95.7 12.3 100 213-313 13-114 (116)
403 2cum_A Tenascin-X; hexabrachio 99.3 1.7E-11 6E-16 95.2 10.2 83 408-495 6-88 (105)
404 2edj_A Roundabout homolog 2; K 99.3 6.1E-12 2.1E-16 97.4 7.5 83 1-115 8-91 (100)
405 3irg_A Titin; IG-like, titin, 99.3 1E-11 3.4E-16 96.2 8.6 83 1-112 5-89 (100)
406 1waa_A Titin; metal binding pr 99.3 4.4E-11 1.5E-15 90.5 11.8 89 214-308 4-92 (93)
407 2crz_A Fibronectin type-III do 99.3 2.5E-11 8.7E-16 95.6 10.9 102 308-413 7-109 (110)
408 1he7_A High affinity nerve gro 99.3 1.3E-11 4.3E-16 97.6 8.9 89 1-115 4-92 (126)
409 2dm2_A Palladin; beta-sandwich 99.3 8.7E-12 3E-16 98.4 8.1 87 1-115 8-95 (110)
410 1u2h_A APEG-1, aortic preferen 99.3 7.5E-12 2.6E-16 96.7 7.5 85 1-114 5-90 (99)
411 1j8k_A Fibronectin; EDA, TYPEI 99.3 2.4E-11 8.1E-16 92.6 10.2 82 411-496 3-85 (94)
412 3grw_A Fibroblast growth facto 99.3 4.4E-11 1.5E-15 109.7 13.9 167 223-393 22-209 (241)
413 3bfo_A Mucosa-associated lymph 99.3 1.2E-11 4E-16 93.8 8.1 74 2-113 4-77 (91)
414 2bk8_A Connectin, M1, titin he 99.3 7.2E-11 2.5E-15 90.6 12.6 89 221-309 6-95 (97)
415 1nct_A Titin; cell adhesion, g 99.3 2.9E-12 1E-16 100.1 4.7 85 1-114 14-98 (106)
416 2kdg_A Myotilin; immonoglobuli 99.3 3.3E-11 1.1E-15 93.2 10.7 94 215-309 5-99 (100)
417 1f97_A Junction adhesion molec 99.3 1.7E-10 5.9E-15 103.3 17.0 162 222-392 7-195 (212)
418 1gxe_A Myosin binding protein 99.3 8.4E-12 2.9E-16 102.0 7.3 101 9-114 25-131 (139)
419 2kkq_A Myotilin; unknown funct 99.3 1.5E-11 5E-16 97.9 8.6 85 1-113 15-100 (116)
420 2w1n_A O-GLCNACASE NAGJ; hexos 99.3 3.3E-11 1.1E-15 100.5 10.8 111 366-495 118-229 (238)
421 1wit_A Twitchin 18TH IGSF modu 99.3 2.6E-11 8.7E-16 92.3 9.5 89 215-306 2-92 (93)
422 1bec_A 14.3.D T cell antigen r 99.3 6.7E-11 2.3E-15 108.1 14.1 123 172-295 72-210 (238)
423 2bk8_A Connectin, M1, titin he 99.3 2.7E-11 9.2E-16 93.1 9.6 81 6-114 5-86 (97)
424 3ojm_B Fibroblast growth facto 99.3 5.4E-11 1.9E-15 108.3 13.3 166 224-393 27-212 (231)
425 2eo9_A Roundabout homolog 1; b 99.2 8.5E-12 2.9E-16 99.9 6.8 83 1-115 8-91 (118)
426 1wfu_A Unnamed protein product 99.2 3E-11 1E-15 95.3 9.7 103 303-409 9-115 (120)
427 3irg_A Titin; IG-like, titin, 99.2 8.1E-11 2.8E-15 91.0 12.1 92 215-307 5-98 (100)
428 2ekj_A Collagen alpha-1(XX) ch 99.2 3.3E-12 1.1E-16 99.5 4.0 87 408-498 6-93 (105)
429 2edj_A Roundabout homolog 2; K 99.2 4.8E-11 1.7E-15 92.2 10.7 93 214-310 7-100 (100)
430 3irg_B Obscurin-like protein 1 99.2 1E-11 3.6E-16 97.5 6.9 84 1-113 13-96 (107)
431 3qwq_B Adnectin; cell surface 99.2 2.7E-11 9.1E-16 95.3 8.9 79 408-490 2-81 (114)
432 1u2h_A APEG-1, aortic preferen 99.2 6.8E-11 2.3E-15 91.2 11.1 93 215-308 5-98 (99)
433 4doh_R Interleukin-20 receptor 99.2 4.2E-10 1.4E-14 100.4 17.6 182 313-503 12-212 (221)
434 2dm3_A KIAA0992 protein, palla 99.2 1.8E-11 6.1E-16 96.7 7.9 100 214-314 8-108 (110)
435 3qhz_H Human monoclonal antibo 99.2 1.2E-10 4E-15 106.1 14.2 131 171-304 82-225 (232)
436 1x44_A Myosin-binding protein 99.2 7.4E-11 2.5E-15 91.7 11.0 89 220-313 11-101 (103)
437 3p2t_A Leukocyte immunoglobuli 99.2 3.1E-10 1.1E-14 100.2 16.5 167 215-392 5-181 (196)
438 2yr3_A Myosin light chain kina 99.2 1E-11 3.4E-16 96.0 5.8 82 1-114 11-92 (99)
439 2e6p_A Obscurin-like protein 1 99.2 7.3E-11 2.5E-15 91.9 10.7 84 226-314 20-103 (104)
440 3bp6_B Programmed cell death 1 99.2 8.8E-11 3E-15 104.4 12.6 162 224-393 10-184 (202)
441 2dlt_A Myosin binding protein 99.2 1.3E-11 4.5E-16 96.6 6.3 78 1-108 8-85 (106)
442 2cui_A Tenascin-X; fibronectin 99.2 6.4E-11 2.2E-15 92.3 10.1 84 407-494 6-98 (112)
443 1epf_A NCAM, protein (neural c 99.2 1.2E-10 4.2E-15 102.4 13.2 160 223-391 9-180 (191)
444 2dav_A SLOW MYBP-C, myosin-bin 99.2 1E-11 3.5E-16 98.3 5.5 89 5-115 10-104 (126)
445 2yuw_A Myosin binding protein 99.2 2.2E-10 7.5E-15 90.2 13.2 96 308-404 6-103 (110)
446 1mq8_A ICAM-1, intercellular a 99.2 6.5E-11 2.2E-15 110.0 11.6 243 9-310 6-284 (291)
447 2dm3_A KIAA0992 protein, palla 99.2 7.4E-12 2.5E-16 98.9 4.5 87 1-115 9-95 (110)
448 3tes_A Tencon; fibronectin typ 99.2 4.2E-11 1.4E-15 91.6 8.6 80 412-495 4-84 (98)
449 1gxe_A Myosin binding protein 99.2 3.6E-11 1.2E-15 98.2 8.7 86 222-307 24-138 (139)
450 2vr9_A Roundabout 1, ROBO; imm 99.2 1.5E-10 5E-15 104.3 13.7 176 213-394 7-198 (217)
451 1ujt_A KIAA1568 protein; fibro 99.2 5.5E-11 1.9E-15 94.0 9.4 84 419-504 25-113 (120)
452 1nct_A Titin; cell adhesion, g 99.2 2.9E-11 9.8E-16 94.4 7.5 93 214-307 13-105 (106)
453 3kvq_A Vascular endothelial gr 99.2 2.6E-11 9.1E-16 95.3 7.4 84 1-115 10-93 (108)
454 1x4x_A Fibronectin type-III do 99.2 1.8E-10 6.1E-15 89.9 12.1 100 308-413 6-105 (106)
455 3tv3_H PGT128 heavy chain, IG 99.2 3.8E-11 1.3E-15 109.8 9.4 130 171-303 85-232 (239)
456 3kvq_A Vascular endothelial gr 99.2 6.1E-11 2.1E-15 93.2 9.4 97 214-313 9-105 (108)
457 1he7_A High affinity nerve gro 99.2 1.3E-10 4.4E-15 91.8 11.1 84 230-313 14-104 (126)
458 1ypz_F T-cell receptor gamma c 99.2 1.4E-10 4.9E-15 105.2 13.0 128 172-302 79-221 (230)
459 2eny_A Obscurin; beta-sandwich 99.2 1.8E-11 6.1E-16 95.1 6.0 77 2-107 9-86 (104)
460 1uc6_A CNTF receptor, ciliary 99.2 1.4E-10 4.6E-15 90.9 11.1 95 408-505 6-105 (109)
461 1oga_E TRBC1, T-cell receptor 99.2 4E-10 1.4E-14 103.9 16.1 127 171-298 75-219 (252)
462 2c1o_A IGK-C protein; FAB frag 99.2 2.1E-10 7.3E-15 106.1 14.2 197 179-391 11-244 (254)
463 2crm_A Fibronectin type-III do 99.2 2.3E-10 7.7E-15 91.8 12.4 101 307-411 15-117 (120)
464 1x44_A Myosin-binding protein 99.2 2.5E-11 8.5E-16 94.4 6.6 78 1-107 6-85 (103)
465 1fhg_A Telokin; immunoglobulin 99.2 3.9E-11 1.3E-15 101.1 8.2 86 1-114 41-126 (154)
466 2e6p_A Obscurin-like protein 1 99.2 2.6E-11 8.9E-16 94.5 6.7 79 1-109 7-88 (104)
467 2edf_A Obscurin; beta-sandwich 99.2 8.7E-11 3E-15 91.3 9.5 95 214-314 7-101 (103)
468 2dmk_A Midline 2 isoform 2; mi 99.2 4E-11 1.4E-15 96.9 7.8 84 408-497 14-110 (127)
469 2dkm_A Collagen alpha-1(XX) ch 99.2 1.2E-10 4.1E-15 90.3 10.2 82 408-496 7-91 (104)
470 2yux_A Myosin-binding protein 99.2 3.4E-11 1.2E-15 96.5 7.2 107 295-402 3-110 (120)
471 1x5y_A Myosin binding protein 99.2 2.7E-10 9.4E-15 89.8 12.3 95 308-403 7-103 (111)
472 2dav_A SLOW MYBP-C, myosin-bin 99.2 2.6E-10 9E-15 90.2 12.0 95 220-314 11-118 (126)
473 3g9v_A Interleukin 22 receptor 99.2 5.1E-11 1.7E-15 105.4 8.8 177 313-497 11-205 (211)
474 4go6_B HCF C-terminal chain 1; 99.2 1.8E-10 6.2E-15 104.3 12.6 125 270-395 44-192 (232)
475 2yuv_A Myosin-binding protein 99.2 2.1E-10 7.3E-15 88.5 11.3 92 214-310 6-97 (100)
476 3caf_A Fibroblast growth facto 99.2 4.1E-11 1.4E-15 92.7 7.1 83 1-113 4-92 (100)
477 1gsm_A Madcam-1, mucosal addre 99.2 2.1E-10 7.3E-15 100.2 12.4 115 173-296 60-193 (210)
478 1fhg_A Telokin; immunoglobulin 99.2 2.3E-10 7.7E-15 96.4 12.3 100 214-314 40-140 (154)
479 1x5x_A Fibronectin type-III do 99.2 2E-10 7E-15 90.2 11.2 102 308-413 6-108 (109)
480 3d85_D IL-12B, interleukin-12 99.2 1E-09 3.5E-14 103.4 17.8 113 283-399 184-302 (306)
481 2eny_A Obscurin; beta-sandwich 99.2 1.1E-10 3.8E-15 90.6 9.3 94 215-313 8-102 (104)
482 2ens_A Advanced glycosylation 99.2 1.7E-11 5.7E-16 94.0 4.5 74 2-113 11-84 (96)
483 2lvc_A Obscurin-like protein 1 99.2 1.3E-10 4.5E-15 87.1 9.2 80 221-305 9-90 (91)
484 1vca_A VCAM-D1,2, human vascul 99.2 4.4E-10 1.5E-14 99.6 14.2 162 225-392 10-180 (202)
485 2edn_A Myosin-binding protein 99.2 4E-11 1.4E-15 93.8 6.5 91 3-115 13-109 (118)
486 2d3v_A Leukocyte immunoglobuli 99.2 3.5E-10 1.2E-14 99.9 13.6 178 214-402 4-192 (196)
487 1pd6_A Cardiac MYBP-C;, myosin 99.2 4.8E-11 1.6E-15 92.5 6.9 78 1-107 15-93 (104)
488 3shs_A HOC head outer capsid p 99.2 8.6E-09 3E-13 90.7 21.7 75 225-310 101-185 (304)
489 1wwb_X Protein (brain derived 99.2 1.9E-10 6.6E-15 89.1 10.3 82 230-311 15-101 (103)
490 3n9g_H FAB fragment of MAB CR4 99.2 2E-10 6.9E-15 104.3 12.1 131 171-306 78-223 (230)
491 2dku_A KIAA1556 protein; beta- 99.2 4.9E-10 1.7E-14 87.0 12.7 95 214-314 7-101 (103)
492 2r15_A Myomesin-1; sarcomeric 99.2 5.7E-10 1.9E-14 100.0 14.9 160 229-392 15-200 (212)
493 3jz7_A MCAR, CAR, coxsackievir 99.2 4E-10 1.4E-14 101.1 13.9 164 224-392 8-202 (214)
494 2gi7_A GPVI protein; IG-like d 99.2 3.2E-10 1.1E-14 98.9 12.8 169 214-401 7-179 (184)
495 1x3d_A Fibronectin type-III do 99.1 2.4E-10 8.1E-15 91.4 10.7 101 308-413 16-117 (118)
496 2eo9_A Roundabout homolog 1; b 99.1 1.4E-10 4.8E-15 92.7 9.3 95 214-312 7-102 (118)
497 1uct_A Immunoglobulin alpha FC 99.1 8.6E-10 2.9E-14 98.9 15.5 167 213-390 7-181 (218)
498 1nbq_A JAM, junctional adhesio 99.1 2.9E-10 9.9E-15 101.6 12.5 163 221-392 9-197 (209)
499 2wqr_A IG epsilon chain C regi 99.1 3.9E-11 1.3E-15 115.5 7.1 210 173-391 73-309 (323)
500 1wwb_X Protein (brain derived 99.1 1.8E-10 6.3E-15 89.2 9.6 88 1-115 4-91 (103)
No 1
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=3.2e-41 Score=337.21 Aligned_cols=268 Identities=22% Similarity=0.303 Sum_probs=219.5
Q ss_pred cceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccC--cEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceee
Q psy12426 224 SDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD--RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 301 (616)
Q Consensus 224 ~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~ 301 (616)
....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++.+...+....|.|.++...|.|.|+|.|.|..|.....
T Consensus 108 ~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 187 (389)
T 2jll_A 108 TIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQE 187 (389)
T ss_dssp CEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEE
T ss_pred ceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEE
Confidence 33467889999999999999999999999999886543 6677666777899999999999999999999999998888
Q ss_pred EEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc-cccceEEeccccCCCeEE
Q psy12426 302 AKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD-VSGTYTRAENLIEGHDYN 380 (616)
Q Consensus 302 ~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~~~~~y~ 380 (616)
..+.+...|.+|.. +.+.......+.|.|.++...++.++..|.++++..+...|..... .....+.|.+|.+++.|.
T Consensus 188 ~~l~v~~~P~~P~~-~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~ 266 (389)
T 2jll_A 188 YILALADVPSSPYG-VKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYE 266 (389)
T ss_dssp EEEEECCCCCCCEE-EEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEECSTTCSEEEECSCCTTCEEE
T ss_pred EEEEecCCCCCCcc-eEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEeeccCCcceEEECCccCCCEEE
Confidence 88888888888765 6677778889999999887777788999999999887777876544 345779999999999999
Q ss_pred EEEEEEecCcCCCCccccCCEEccCCCC-CCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEe
Q psy12426 381 FRVKAVNKIGESLPLVCQSPITAKDPFG-RPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKA 458 (616)
Q Consensus 381 ~~v~a~n~~g~~~~~~~s~~~~~~~~~~-~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~ 458 (616)
|+|.|.|..|.+.++. ...+.+... +|.+| .+.....+.+++.|+|.+|. ++++++.+|.|+|+..+. .|...
T Consensus 267 ~~v~A~N~~G~~~~s~---~~~~~t~~~~~p~~p-~~~~~~~~~~~v~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~ 341 (389)
T 2jll_A 267 IRVAAVNGKGQGDYSK---IEIFQTLPVREPSPP-SIHGQPSSGKSFKLSITKQD-DGGAPILEYIVKYRSKDKEDQWLE 341 (389)
T ss_dssp EEEEEEESSCBCCCCC---CEEEECCCCCCCCCC-CEEEEEETTTEEEEEECCCC-CCSSCCCEEEEEEEC-----CCBC
T ss_pred EEEEEEcCCccCCCCc---ceEEEecCCCCCCCC-ccccccCcCCEEEEEEECCC-CCCCcccEEEEEEEeCCCCcceeE
Confidence 9999999999887753 334433333 55555 57777789999999999764 556689999999998665 67655
Q ss_pred EeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCC
Q psy12426 459 CIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKA 497 (616)
Q Consensus 459 ~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~ 497 (616)
..+.+....++|.+|.|++.|.|+|+|.|..|.|++|..
T Consensus 342 ~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~ 380 (389)
T 2jll_A 342 KKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY 380 (389)
T ss_dssp CEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE
T ss_pred eeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCceee
Confidence 566677889999999999999999999999999988854
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=2.1e-36 Score=316.75 Aligned_cols=466 Identities=15% Similarity=0.157 Sum_probs=301.9
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee------------------------ccceEEEeecC
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL------------------------RPIWEKCAQTE 56 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~------------------------~G~Y~C~a~n~ 56 (616)
||.+. ++++++.+.+|+.+.|.|.+.|+|.|.|+|+|+|..|.. +|.|+|.|.|.
T Consensus 5 pP~f~-~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (570)
T 3b43_A 5 PPYFI-EPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENS 83 (570)
T ss_dssp CCEEE-ECCCCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcce-EECCceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeC
Confidence 67766 679999999999999999999999999999999886631 89999999998
Q ss_pred CCC--------------Cc-------------e--eEeeeccCCccc----eeeccccCCC-----------CCceEecC
Q psy12426 57 GDT--------------PK-------------G--KVLDLIEGNHPI----WEKCAQTEGD-----------TPKGKVLD 92 (616)
Q Consensus 57 ~~~--------------~~-------------~--~v~~~~~~~~p~----w~~~~~~~~~-----------~~~l~i~~ 92 (616)
.|. |+ + ..+.|...|.|. |++++..... ...|.|.+
T Consensus 84 ~g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~ 163 (570)
T 3b43_A 84 VGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQ 163 (570)
T ss_dssp TEEEEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESS
T ss_pred CceEEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECc
Confidence 664 11 0 122332334443 9998876322 24688999
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCc-----ceeecCCCcee--------e----eecCcccccEEEEeeccCccccc
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAP-----HIARAKKGKCY--------H----LVGTLLKDSIYEQLKRSGLFDQF 155 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~-----~~~~~~~p~~~--------~----~~g~p~~~~~~~~~~~~~~~~~~ 155 (616)
+...|.|.|+|.|.|..|....+..... .......|..+ . ..|.|.+.+.|++ ++..+.
T Consensus 164 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k--~g~~i~-- 239 (570)
T 3b43_A 164 TDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAK--DNREIR-- 239 (570)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEE--TTEECC--
T ss_pred CChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEE--CCEECc--
Confidence 9999999999999999886543311100 00000111111 1 2288888999999 533222
Q ss_pred ccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEE
Q psy12426 156 HLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFE 235 (616)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~ 235 (616)
....+... .......|.|.++..+|.|.|+|.|.|..|....+ ..+ ....+|.+.........+..|+.+.
T Consensus 240 -~~~~~~~~--~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~-----~~l-~V~~~p~~~~~~~~~~~v~~g~~~~ 310 (570)
T 3b43_A 240 -PGGNYKMT--LVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCS-----AQL-GVQEPPRFIKKLEPSRIVKQDEHTR 310 (570)
T ss_dssp -TTSSEEEE--EETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEE-----EEE-CCBCCCEEEECCCSBCCEESSCEEE
T ss_pred -CCCcEEEE--EECCEEEEEEcccCcccCEEEEEEEECCCCcEEEE-----EEE-EeecCCcccccCCCccEEcCCCcEE
Confidence 22222221 12334589999999999999999999998864321 222 1235676654444445688999999
Q ss_pred EEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCC
Q psy12426 236 FDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEG 315 (616)
Q Consensus 236 l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~ 315 (616)
|.|.+.|.|.+.+.|++++..+..+.++.+...+....|.|.++...|.|.|+|.|.|..|....++.|.+..+|.....
T Consensus 311 l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~ 390 (570)
T 3b43_A 311 YECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKK 390 (570)
T ss_dssp EEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSC
T ss_pred EEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecC
Confidence 99999999999999999999988777777766666778999999999999999999999999988999999888765444
Q ss_pred CccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeC-CCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCCC
Q psy12426 316 PLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDM-ETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLP 394 (616)
Q Consensus 316 ~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~ 394 (616)
+..+....+..+.|.|...... ...+.+|. ..... ...............+.|.++...+.+.|+|.|.|..|....
T Consensus 391 ~~~~~~~~G~~v~l~C~~~g~P-~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~ 468 (570)
T 3b43_A 391 PHPVETLKGADVHLECELQGTP-PFQVSWHK-DKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTC 468 (570)
T ss_dssp CCCEEECTTCCEEEEEEEESSS-SCCCEEEE-TTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCceeecCCCEEEEEEEEecCC-CCEEEEEE-CCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEE
Confidence 3344556678899999864332 11222221 00011 111222222223356889999999999999999999997543
Q ss_pred ccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-----CceEeEeecCCccEEE
Q psy12426 395 LVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-----PWEKACIVPANITATS 469 (616)
Q Consensus 395 ~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-----~~~~~~~~~~~~~~~~ 469 (616)
...+.+..+......+.++. ......+.|....-..+ ...+. |...+. .-............+.
T Consensus 469 ---~~~l~v~~~P~~~~~~~~~~--~~~g~~~~l~c~~~g~p-~~~v~-----W~k~~~~~~~~~~~~~~~~~~~~~~L~ 537 (570)
T 3b43_A 469 ---VGSITLKAPPRFVKKLSDIS--TVVGEEVQLQATIEGAE-PISVA-----WFKDKGEIVRESDNIWISYSENIATLQ 537 (570)
T ss_dssp ---EEEEEECCCCEEEECCCCBC--CBTTCCEEEEEEEESCS-SCCCE-----EEETTEECCCCTTTEEECCCSSEEEEE
T ss_pred ---EEEEEeccCCcccccCCCce--ecCCCeEEEEEEEecCC-CCEEE-----EEeCCeEeccCCCeEEEEECCCEEEEE
Confidence 22333321110001111111 11233445554421111 00122 222110 0011112223456788
Q ss_pred cCCCCCCCeEEEEEEEEcCCCCCC
Q psy12426 470 VPDLKEGEEYEFRVIAVNKGGPGE 493 (616)
Q Consensus 470 l~~L~p~t~Y~~~v~a~n~~G~g~ 493 (616)
|.++.+...-.|.+.|.|..|...
T Consensus 538 i~~~~~~d~G~Y~C~a~N~~G~~~ 561 (570)
T 3b43_A 538 FSRAEPANAGKYTCQIKNEAGTQE 561 (570)
T ss_dssp ESSCCTTCCEEEEEEEECSSCEEE
T ss_pred ECcCCHHHCEEEEEEEEECCcEEE
Confidence 999999999999999999999754
No 3
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=4.1e-36 Score=323.83 Aligned_cols=328 Identities=16% Similarity=0.255 Sum_probs=249.6
Q ss_pred cCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeE-EE--ECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEE
Q psy12426 213 KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKE-WL--CNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTL 289 (616)
Q Consensus 213 ~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~-W~--~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c 289 (616)
..+|.|. .+.++.+..|+++.|.|.+.|.|.+.+. |+ +++..+.......+........|.|.++.+.|.|.|+|
T Consensus 163 ~~~p~~~--~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c 240 (731)
T 2v5y_A 163 TRTPHFL--RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRC 240 (731)
T ss_dssp SSSCEEC--CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEE
T ss_pred ccccccc--cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEE
Confidence 3556664 3457899999999999999999999988 88 67766543322222111223689999999999999999
Q ss_pred EEEcCCCC-ceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceE
Q psy12426 290 AVKNSWGT-DKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYT 368 (616)
Q Consensus 290 ~a~n~~g~-~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~ 368 (616)
.|.|..|. ....+.+.+..+|.+|.. ..+.......+.|.|..+...++.++..|.|+++.. ...|..........+
T Consensus 241 ~A~n~~G~~~s~~~~l~V~~~P~~~~~-p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~-~~~~~~~~~~~~~~~ 318 (731)
T 2v5y_A 241 MIRTEGGVGISNYAELVVKEPPVPIAP-PQLASVGATYLWIQLNANSINGDGPIVAREVEYCTA-SGSWNDRQPVDSTSY 318 (731)
T ss_dssp EEEETTEEEECCCEEEEEECCCCBSSC-CEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEES-SSSCEEEEECCSSEE
T ss_pred EEECCCCCcceeeEEEEEecCCCCCCC-cceeccCCceEEEEeCCcccCCCCccEEEEEEEEEC-CCCceEEeccCcceE
Confidence 99999997 677788999999988877 456677888999999987666667899999999875 456766655566889
Q ss_pred EeccccCCCeEEEEEEEE--ecCcCCCCccccCCEEccCCCC-CCCCCCCCEEEEecCCeEEEEecCCCCC-CCCcceeE
Q psy12426 369 RAENLIEGHDYNFRVKAV--NKIGESLPLVCQSPITAKDPFG-RPDRPGQPTVTDWGKDHVDLEWTPPKKD-GGSPISQY 444 (616)
Q Consensus 369 ~i~~L~~~~~y~~~v~a~--n~~g~~~~~~~s~~~~~~~~~~-~p~~p~~~~~~~~~~~~v~l~W~~p~~~-~~~~i~~Y 444 (616)
.+.+|.+++.|.|+|.|. |..|.+.++ ..+.+.+... +|.+|.++.+...+.+++.|+|.+|... ..+.+.+|
T Consensus 319 ~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S---~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y 395 (731)
T 2v5y_A 319 KIGHLDPDTEYEISVLLTRPGEGGTGSPG---PALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNL 395 (731)
T ss_dssp EECSCCTTCEEEEEEEEECSSTTCSCCBC---CCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEE
T ss_pred EEeCCCCCCEEEEEEEEEecCCCccccCC---CcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeE
Confidence 999999999999999999 999998764 3345544443 4578889999999999999999987532 23468899
Q ss_pred EEEEeeCCC-CceE----eEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccc
Q psy12426 445 IIEKKPKYG-PWEK----ACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQD 519 (616)
Q Consensus 445 ~i~~~~~~~-~~~~----~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~ 519 (616)
.|+|+.... .+.. ..........++|.+|.|++.|.|+|+|.|..|.|+ |... ...+.
T Consensus 396 ~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~---~~~T~------------- 458 (731)
T 2v5y_A 396 TVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQEL---IVQTD------------- 458 (731)
T ss_dssp EEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCE---EEECC-------------
T ss_pred EEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceE---EEEcc-------------
Confidence 999987763 2221 124456678999999999999999999999999984 4432 22211
Q ss_pred eeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCC--CCeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEee
Q psy12426 520 MTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPS--KPEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRE 597 (616)
Q Consensus 520 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--~~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~ 597 (616)
..+|.+|. .+.... +.++|.|+|++|... ||.|.+|+|.|+.
T Consensus 459 ----------------------------------~~~P~~p~~~~~~~~~-~~~si~l~W~~P~~~-~g~i~~Y~V~~~~ 502 (731)
T 2v5y_A 459 ----------------------------------EDLPGAVPTESIQGST-FEEKIFLQWREPTQT-YGVITLYEITYKA 502 (731)
T ss_dssp ----------------------------------CCCCCCCCTTTCEEEE-ETTEEEEECCCCSCC-SSCCCEEEEEEEE
T ss_pred ----------------------------------CCCCCCCCcceEEeee-cCCeEEEEEcCCCCC-CCCccceEEEEEE
Confidence 13344443 344433 578999999998654 7899999999997
Q ss_pred cCC
Q psy12426 598 RTS 600 (616)
Q Consensus 598 ~~~ 600 (616)
.+.
T Consensus 503 ~~~ 505 (731)
T 2v5y_A 503 VSS 505 (731)
T ss_dssp EEE
T ss_pred CcC
Confidence 653
No 4
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=311.08 Aligned_cols=403 Identities=17% Similarity=0.212 Sum_probs=245.7
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeee-ee--eCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceee
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVD-WR--AGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEK 77 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~-W~--~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~ 77 (616)
||.+. .+.++.|.+|++++|.|.+.|+|.|.|. |+ ++|..+.... +.... .
T Consensus 165 ~p~~~--~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~-~~~~~-~---------------------- 218 (731)
T 2v5y_A 165 TPHFL--RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKE-IKVTS-S---------------------- 218 (731)
T ss_dssp SCEEC--CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEE-EEECC-S----------------------
T ss_pred ccccc--cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccc-eEEec-c----------------------
Confidence 45554 3678999999999999999999999998 88 7888776321 11000 0
Q ss_pred ccccCCCCCceEecCcccCCeEEEEEEEEcCCCCC-CCCCCCCcceeecC---CCc-------eeeee-------c-Ccc
Q psy12426 78 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPG-EPSDPTAPHIARAK---KGK-------CYHLV-------G-TLL 138 (616)
Q Consensus 78 ~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~-~~~~~~~~~~~~~~---~p~-------~~~~~-------g-~p~ 138 (616)
.....+|.|.++.++|.|.|+|.|.|..|.+ ........ ..... .|. .+.+. | .++
T Consensus 219 ----~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V-~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i 293 (731)
T 2v5y_A 219 ----RRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV-KEPPVPIAPPQLASVGATYLWIQLNANSINGDGPI 293 (731)
T ss_dssp ----SEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEE-ECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCC
T ss_pred ----ccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEE-ecCCCCCCCcceeccCCceEEEEeCCcccCCCCcc
Confidence 0113589999999999999999999999973 22211100 11111 111 11111 2 566
Q ss_pred cccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEE--eCCCCCCCCCCCCCEEeccccCCC
Q psy12426 139 KDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV--NKGGPGEPSDPTAPHIARAKKVSP 216 (616)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~--n~~g~~~~s~~~~~~~~~~~~~~P 216 (616)
..|.+++ + .....|..... .....+.|.+|.+++.|.|+|.|. |..|.+..+.. +.+..
T Consensus 294 ~~Y~v~~--~-------~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~---~~~~t----- 354 (731)
T 2v5y_A 294 VAREVEY--C-------TASGSWNDRQP--VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPA---LRTRT----- 354 (731)
T ss_dssp CEEEEEE--E-------ESSSSCEEEEE--CCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCC---EEEEC-----
T ss_pred EEEEEEE--E-------ECCCCceEEec--cCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCc---EEeee-----
Confidence 7788877 4 23445665433 334688899999999999999998 88887654311 00000
Q ss_pred ceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 217 YINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 217 ~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
.
T Consensus 355 -------------------------------------------~------------------------------------ 355 (731)
T 2v5y_A 355 -------------------------------------------K------------------------------------ 355 (731)
T ss_dssp -------------------------------------------C------------------------------------
T ss_pred -------------------------------------------c------------------------------------
Confidence 0
Q ss_pred CceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCC-CCceEEEEEEEEeCCCCCEE---E---ccccccceEE
Q psy12426 297 TDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDG-GTDILHYVVEKMDMETGRWV---P---MGDVSGTYTR 369 (616)
Q Consensus 297 ~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~-~~~i~~y~v~~~~~~~~~~~---~---~~~~~~~~~~ 369 (616)
...+|.+|.+ +.+...+.+++.|+|.++.... ...+.+|.|+|+......+. . ........+.
T Consensus 356 ---------~~~p~~~P~~-~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (731)
T 2v5y_A 356 ---------CADPMRGPRK-LEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHT 425 (731)
T ss_dssp ---------CCCCSCCCEE-EEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEE
T ss_pred ---------CCCCCCCCce-eEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEE
Confidence 0123455555 6677788899999999875432 34678999999875533331 1 2224567899
Q ss_pred eccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCC--CCEEEEecCCeEEEEecCCCCCCCCcceeEEEE
Q psy12426 370 AENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPG--QPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIE 447 (616)
Q Consensus 370 i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~--~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~ 447 (616)
+.+|.+++.|.|+|.|.|..|.+. +..+.+.+...+|.+|. .+.... ..+++.|+|.+|...++ .|.+|.|+
T Consensus 426 i~~L~p~t~Y~~~V~A~n~~G~s~----S~~~~~~T~~~~P~~p~~~~~~~~~-~~~si~l~W~~P~~~~g-~i~~Y~V~ 499 (731)
T 2v5y_A 426 ITNLSPYTNVSVKLILMNPEGRKE----SQELIVQTDEDLPGAVPTESIQGST-FEEKIFLQWREPTQTYG-VITLYEIT 499 (731)
T ss_dssp ECSCCSSCEEEEEEEEECSSCEEE----CCCEEEECCCCCCCCCCTTTCEEEE-ETTEEEEECCCCSCCSS-CCCEEEEE
T ss_pred ECCCCCCCEEEEEEEEEcCCCCCC----CceEEEEccCCCCCCCCcceEEeee-cCCeEEEEEcCCCCCCC-CccceEEE
Confidence 999999999999999999999863 56677777778888775 444433 47899999998866555 79999999
Q ss_pred EeeCCC--------CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccc
Q psy12426 448 KKPKYG--------PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQD 519 (616)
Q Consensus 448 ~~~~~~--------~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~ 519 (616)
|+..+. .+.......+....++|.+|.|++.|.|+|+|.|..|.|+++. .. +++.
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~-~~T~--------------- 562 (731)
T 2v5y_A 500 YKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPAT-NQ-FTTK--------------- 562 (731)
T ss_dssp EEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEEE-EE-EECC---------------
T ss_pred EEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCcc-cE-EEcC---------------
Confidence 987653 1122334456678999999999999999999999999998773 11 1111
Q ss_pred eeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCe--EEeecCCcEEEEeeCCCCCCCCceeeeEEEEee
Q psy12426 520 MTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPE--ATDVDKDHIKIKWQQPISNGGSAIKGYEVERRE 597 (616)
Q Consensus 520 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~--~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~ 597 (616)
..+|.+|..+. ....+.++|.|+|.+|. +.||+|.+|+|.|++
T Consensus 563 ----------------------------------~~~P~~p~~~~~~~~~~~~~si~l~W~pp~-~~~g~I~~Y~v~~~~ 607 (731)
T 2v5y_A 563 ----------------------------------ISAPSMPAYELETPLNQTDNTVTVMLKPAH-SRGAPVSVYQIVVEE 607 (731)
T ss_dssp ----------------------------------CCCCCC----------------------------------------
T ss_pred ----------------------------------CCCCCCCCcccccccccCCceEEEEEeCCC-CCCCceEEEEEEEEe
Confidence 12344444332 34568899999999874 458999999999987
Q ss_pred cCC
Q psy12426 598 RTS 600 (616)
Q Consensus 598 ~~~ 600 (616)
.+.
T Consensus 608 ~~~ 610 (731)
T 2v5y_A 608 ERP 610 (731)
T ss_dssp ---
T ss_pred cCC
Confidence 654
No 5
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=7.5e-33 Score=289.78 Aligned_cols=378 Identities=15% Similarity=0.186 Sum_probs=261.9
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee------------------------ccceEEEeecC
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL------------------------RPIWEKCAQTE 56 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~------------------------~G~Y~C~a~n~ 56 (616)
||.+. ..+.++.+.+|+.+.|.|.+.|.|+|.|+|+|||..+.. +|.|+|.|.|.
T Consensus 101 ~p~~~-~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 179 (570)
T 3b43_A 101 PPSFA-RKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNP 179 (570)
T ss_dssp CCEES-SCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCccc-ccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeC
Confidence 34554 447888999999999999999999999999999976631 79999999998
Q ss_pred CCC--------------Cc-------------e--eEeeeccCCccc----eeeccccCCC-----------CCceEecC
Q psy12426 57 GDT--------------PK-------------G--KVLDLIEGNHPI----WEKCAQTEGD-----------TPKGKVLD 92 (616)
Q Consensus 57 ~~~--------------~~-------------~--~v~~~~~~~~p~----w~~~~~~~~~-----------~~~l~i~~ 92 (616)
.|. |+ + ..+.|...|.|. |.+++..... ...|.|.+
T Consensus 180 ~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~ 259 (570)
T 3b43_A 180 LGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLK 259 (570)
T ss_dssp TEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESS
T ss_pred CcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcc
Confidence 654 10 0 122232224443 9998775322 25689999
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCc----ceeecCCCc-------eee----eecCcccccEEEEeeccCccccccc
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAP----HIARAKKGK-------CYH----LVGTLLKDSIYEQLKRSGLFDQFHL 157 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~----~~~~~~~p~-------~~~----~~g~p~~~~~~~~~~~~~~~~~~~~ 157 (616)
+...|.|.|+|.|.|..|....+..... ..+....+. .+. ..|.|.+.+.|++ ++..+. .
T Consensus 260 v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k--~~~~l~---~ 334 (570)
T 3b43_A 260 VTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK--DETEIQ---E 334 (570)
T ss_dssp BCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEE--TTEECC---C
T ss_pred cCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeE--CCEECC---C
Confidence 9999999999999999886543311111 011111111 111 2288999999999 533222 2
Q ss_pred CCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEE
Q psy12426 158 CPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFD 237 (616)
Q Consensus 158 ~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~ 237 (616)
...+... .......|.|.++..+|.|.|+|.|.|..|....+ ..+. ...+|.+ ...+....+..|+.+.|.
T Consensus 335 ~~~~~~~--~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~-----~~l~-V~~~P~~-~~~~~~~~~~~G~~v~l~ 405 (570)
T 3b43_A 335 SSKFRMS--FVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSS-----TSLK-VKEPPVF-RKKPHPVETLKGADVHLE 405 (570)
T ss_dssp SSSEEEE--EETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEE-----EEEC-EECCCEE-CSCCCCEEECTTCCEEEE
T ss_pred CCcEEEE--EECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEE-----EEEE-ecCCCee-ecCCCceeecCCCEEEEE
Confidence 2222221 12334579999999999999999999999864422 1111 1356666 344567788899999999
Q ss_pred EEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCc
Q psy12426 238 INVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPL 317 (616)
Q Consensus 238 c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~ 317 (616)
|.+.|.|.+.+.|++++..+..+.++.+...+....|.|.++...|.|.|+|.|.|..|.....+.+.+..+|.....+.
T Consensus 406 C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~ 485 (570)
T 3b43_A 406 CELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLS 485 (570)
T ss_dssp EEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCC
T ss_pred EEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCC
Confidence 99999999999999999999888888877777777999999999999999999999999998888999888776443322
Q ss_pred cceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeC-CCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCCC
Q psy12426 318 KPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDM-ETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLP 394 (616)
Q Consensus 318 ~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~-~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~ 394 (616)
......+..+.|.|...... ...+.+|.-..... ...............+.|.++...+.+.|.|.|.|..|....
T Consensus 486 ~~~~~~g~~~~l~c~~~g~p-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 562 (570)
T 3b43_A 486 DISTVVGEEVQLQATIEGAE-PISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQEC 562 (570)
T ss_dssp CBCCBTTCCEEEEEEEESCS-SCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEE
T ss_pred CceecCCCeEEEEEEEecCC-CCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEE
Confidence 34445677888888763321 11222221000000 111111222233467899999999999999999999997543
No 6
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=100.00 E-value=6.8e-33 Score=292.28 Aligned_cols=478 Identities=14% Similarity=0.113 Sum_probs=292.6
Q ss_pred CCceEecCCCeEEEEEEEe-------eecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecccc
Q psy12426 9 LGDIKLSAGTTLKFDANII-------GEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQT 81 (616)
Q Consensus 9 ~~~~~v~~g~~v~l~C~~~-------g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~ 81 (616)
|++.+|.+|+.|+|.|.+. |.|.|.|.|++||..+.. ..|+-.
T Consensus 10 p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~-~~~~~~----------------------------- 59 (589)
T 3l5h_A 10 PESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPK-EQYTII----------------------------- 59 (589)
T ss_dssp CSCCCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCG-GGCBCC-----------------------------
T ss_pred cCCCEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECCh-HHcccc-----------------------------
Confidence 7888999999999999988 778899999999987762 232110
Q ss_pred CCCCCceEecCcccCCeEEEEEEEEcCCCCCC-CCCCCCcceeecCCCceeeee----------------cCcccccEEE
Q psy12426 82 EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE-PSDPTAPHIARAKKGKCYHLV----------------GTLLKDSIYE 144 (616)
Q Consensus 82 ~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~-~~~~~~~~~~~~~~p~~~~~~----------------g~p~~~~~~~ 144 (616)
......|+|.++...+.+ |.|.+........ ..........++..|.++... ..+...|.++
T Consensus 60 ~~~~~~l~i~~~~~~~~~-y~C~~~~~~~~~~~~~~~~l~v~~pP~~P~nl~c~~~~~~~~~~~W~~~~~~~~~~~y~l~ 138 (589)
T 3l5h_A 60 NRTASSVTFTDIASLNIQ-LTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLK 138 (589)
T ss_dssp SSSCCBCCCCCCCSSCCC-CCCC-CCTTCC-CCCCCCCCCC-CCCCCCEEEEEEEETTSCEEEEEECCSCCSSCEEEEEC
T ss_pred CCcEeEEEEecCCCccee-eEEecccCCCcccEEEeEEEeccCCCCCCEeeEEEECCCceEEEEECCCCcCCcCceEEEE
Confidence 122567888998887654 6688763221111 110111112344556666522 1223445555
Q ss_pred EeeccCcccccccCCCceEecccCCCCCeEEee-cccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc----ccCCCcee
Q psy12426 145 QLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVL-DLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA----KKVSPYIN 219 (616)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~----~~~~P~~~ 219 (616)
+ . .....+..+....+....+.|. ++.+...|.|+|.|.|..|...... +.+.. .+.+|.
T Consensus 139 ~--~-------~~~~~~~~c~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~----~~~~~~~~~~p~pP~-- 203 (589)
T 3l5h_A 139 S--E-------WATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDH----INFDPVYKVKPNPPH-- 203 (589)
T ss_dssp C--B-------CSSSBCCCEECBTTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCC----EEECGGGSEECCCCC--
T ss_pred E--E-------EcCCCcccCCCCCCCcEEEEECCCCchheeEEEEEEEEeCCCCccccc----EEEccccEEEcCCCc--
Confidence 4 2 1122233333333334556676 7899999999999999999854321 22211 233342
Q ss_pred ccCCcceEEE----cCCeEEEEEEEeeec-Cc----eeEEEECCeeecccCcEEE---EecCCceEEEecCCCCCCcEEE
Q psy12426 220 RDQLSDIKVR----AGSNFEFDINVIGEP-IP----TKEWLCNDITIISKDRFKI---VNDDKSTKLKVFDSKRGDSGIY 287 (616)
Q Consensus 220 ~~~~~~~~v~----~g~~~~l~c~~~~~p-~~----~~~W~~~~~~~~~~~~~~~---~~~~~~~~l~i~~l~~~~~g~y 287 (616)
.+.+. ....+.|.+...... .+ .+.|...+.. ....+ ........+.|.+|.+...|.|
T Consensus 204 -----~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~----~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 274 (589)
T 3l5h_A 204 -----NLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAS----TWSQIPPEDTASTRSSFTVQDLKPFTEYVF 274 (589)
T ss_dssp -----SCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCS----CCBCCCTTSSCSCCSEEEECSCCSSCCEEE
T ss_pred -----eEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCC----CcEEEccccCcCceeEEEECCCCCCCEEEE
Confidence 23331 223455554322111 01 2333332211 00001 0112345889999999999999
Q ss_pred EEEEEcCCCCcee---eEEEEEecCCCCCC-CCc---cc---eeecCCeEEEEEeCC-CCCCCCceEEEEEEEEeCCCCC
Q psy12426 288 TLAVKNSWGTDKG---TAKVTVLDIPSPPE-GPL---KP---SNITKSSCNLEWRAP-RDDGGTDILHYVVEKMDMETGR 356 (616)
Q Consensus 288 ~c~a~n~~g~~~~---~~~l~v~~~p~~p~-~~~---~~---~~~~~~~~~l~W~~~-~~~~~~~i~~y~v~~~~~~~~~ 356 (616)
++.|.|..|.+.. +..+.+...+..|. .|. .+ .......+.|.|+++ ....+..+.+|.|.++.... .
T Consensus 275 ~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~-~ 353 (589)
T 3l5h_A 275 RIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKS-H 353 (589)
T ss_dssp EEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTS-C
T ss_pred EEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCC-C
Confidence 9999998876432 33444444444442 221 12 234567899999964 33345689999999865433 2
Q ss_pred EEEccccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCC
Q psy12426 357 WVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKD 436 (616)
Q Consensus 357 ~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~ 436 (616)
|... ......+.+ |.+++.|.|+|.|.|..|.+..+.. ........+|.++.++.+... .+++.|+|.+|..
T Consensus 354 ~~~~-~~~~~~~~~--l~~~~~Y~~~V~A~n~~G~~~~s~~---~~~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~~- 425 (589)
T 3l5h_A 354 LQNY-TVNATKLTV--NLTNDRYLATLTVRNLVGKSDAAVL---TIPACDFQATHPVMDLKAFPK-DNMLWVEWTTPRE- 425 (589)
T ss_dssp CCBC-CCSSSCCEE--CCCSSCCCEEEEEEBTTBCCCCCCC---CCCCTTCCCCSCCCSCEEEEC-SSSEEEECCCCSS-
T ss_pred ceee-ccCCceEEE--EeCCCCEEEEEEEEeCCccCCCeEE---EeecccccCCCCcceEEEEEC-CCeEEEEEECCCC-
Confidence 3222 122233443 8899999999999999999876532 111122234556668887765 6899999998753
Q ss_pred CCCcceeEEEEEeeCCCC----ceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCee
Q psy12426 437 GGSPISQYIIEKKPKYGP----WEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVI 512 (616)
Q Consensus 437 ~~~~i~~Y~i~~~~~~~~----~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~ 512 (616)
.+.+|.|+|+..+.. .............+.+.+|.|++.|.|+|+|.|..|.|..+.. ...
T Consensus 426 ---~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~~~----~~~-------- 490 (589)
T 3l5h_A 426 ---SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESI----KAY-------- 490 (589)
T ss_dssp ---CCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSCCCSSSEEEEEECBEETTEECCCEEE----EEE--------
T ss_pred ---CccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhccccCcEEEEEEEEEeCCcccCCEEE----EEE--------
Confidence 588999999887641 1111122333556778999999999999999999999876421 111
Q ss_pred ccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCC-CCCCCCceeee
Q psy12426 513 DQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQP-ISNGGSAIKGY 591 (616)
Q Consensus 513 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p-~~~~~~~i~~Y 591 (616)
+...+|.+|..+.+...+.+++.|+|++| ..+.+|.|.+|
T Consensus 491 ---------------------------------------t~~~~P~~pp~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y 531 (589)
T 3l5h_A 491 ---------------------------------------LKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNY 531 (589)
T ss_dssp ---------------------------------------SSCCCCSSCCCCCEECCCSSCBEEBCCCCCHHHHCSCEEEE
T ss_pred ---------------------------------------eccCCCCCCCeEEEeecccceEEEEecCCCHHHcCccceeE
Confidence 11234555667888899999999999984 35558999999
Q ss_pred EEEEeecCCCCeE
Q psy12426 592 EVERRERTSGRWI 604 (616)
Q Consensus 592 ~i~~~~~~~~~w~ 604 (616)
+|.|+..++.+|.
T Consensus 532 ~v~~~~~~~~~~~ 544 (589)
T 3l5h_A 532 TIFYRTIIGNETA 544 (589)
T ss_dssp EECCBCSSCCCCC
T ss_pred EEEEEeCCCCeEE
Confidence 9999988877774
No 7
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=100.00 E-value=1.1e-30 Score=251.49 Aligned_cols=225 Identities=29% Similarity=0.494 Sum_probs=183.8
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEec--cccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIAR--AKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 250 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~--~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W 250 (616)
.|.|.+++.+|.|.|+|.|.|..|....+ ..+.+. +....|.+ ...+....+..|+.+.|.|.+.+.|.+.+.|
T Consensus 63 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~---~~l~V~~~p~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W 138 (305)
T 2nzi_A 63 QLIIASVTDDDATVYQVRATNQGGSVSGT---ASLEVEVPAKIHLPKT-LEGMGAVHALRGEVVSIKIPFSGKPDPVITW 138 (305)
T ss_dssp EEEESSCCGGGCSEEEEEEEETTEEEEEE---EEEEECEEEEECCCHH-HHSSCCEEEETTCCEEEEEEEEEESCCEEEE
T ss_pred EEEEccCChhhCeEEEEEEEcCCCCccce---EEEEEecCCccCCCcc-ccccccEEecCCCEEEEEEEECCCCCCEEEE
Confidence 67788888888888888888876653211 112221 11112221 1223567788999999999999999999999
Q ss_pred EECCeeecccCcEEEEecCCceEEEecC-CCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEE
Q psy12426 251 LCNDITIISKDRFKIVNDDKSTKLKVFD-SKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNL 329 (616)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~-l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l 329 (616)
++++..+....++.+...+....|.|.+ +...|.|.|+|.|.|..|.......+.+...|.+|.. +.+.......+.|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~-~~~~~~~~~~v~l 217 (305)
T 2nzi_A 139 QKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRG-VKVSDVSRDSVNL 217 (305)
T ss_dssp EESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEE-EEEESCCSSCEEE
T ss_pred EECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCC-ceeeeccCCEEEE
Confidence 9999988877788877777778999999 9999999999999999999999999999999988876 6677778899999
Q ss_pred EEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEE
Q psy12426 330 EWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPIT 402 (616)
Q Consensus 330 ~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~ 402 (616)
+|..|..+++..+..|.++++......|..........+.|.+|.+++.|.|+|.|.|..|.+.++..+..++
T Consensus 218 ~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~ 290 (305)
T 2nzi_A 218 TWTEPASDGGSKITNYIVEKCATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTI 290 (305)
T ss_dssp EEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEE
T ss_pred EEcCCccCCCCceeEEEEEEecCCCCccEECccccCceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEE
Confidence 9998877778899999999999888899888766678899999999999999999999999999887666655
No 8
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.98 E-value=6.2e-30 Score=255.33 Aligned_cols=319 Identities=18% Similarity=0.239 Sum_probs=236.1
Q ss_pred CcceEEEcCCeEEEEEEEeeecCceeEEEEC--Ceeecc-----cCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCC
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCN--DITIIS-----KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSW 295 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~--~~~~~~-----~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 295 (616)
+.+..+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.. ..++.+........|.|.+++..|.|.|+|.|.|..
T Consensus 7 ~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 86 (389)
T 2jll_A 7 LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRI 86 (389)
T ss_dssp CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSS
T ss_pred cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCC
Confidence 4567788999999999999999999999999 877754 456777666667799999999999999999999999
Q ss_pred CCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCC----C---CCEEEccccccceE
Q psy12426 296 GTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDME----T---GRWVPMGDVSGTYT 368 (616)
Q Consensus 296 g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~----~---~~~~~~~~~~~~~~ 368 (616)
|.....+.|.|..+|.....+.......+..+.|.|...... .. .+.|...+ . .............+
T Consensus 87 g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p----~~--~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L 160 (389)
T 2jll_A 87 GGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNP----PA--SIHWRRDKLVLPAKNTTNLKTYSTGRKMIL 160 (389)
T ss_dssp CEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEES----CC--EEEEEETTEESSCTTCTTEEEEECSSCEEE
T ss_pred CCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecC----CC--eEEEEECCccCCcccCceEEEeccCCEEEE
Confidence 998888899998777654432222445677889999753221 11 23332211 1 11222222334578
Q ss_pred EeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEE
Q psy12426 369 RAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEK 448 (616)
Q Consensus 369 ~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~ 448 (616)
.|.++...+.|.|+|.|.|..|.... ...+.+ ...|.+|..+.+.....+++.|.|.+|..+++.++.+|.|+|
T Consensus 161 ~i~~~~~~d~G~Y~C~a~N~~G~~~~---~~~l~v---~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~ 234 (389)
T 2jll_A 161 EIAPTSDNDFGRYNCTATNHIGTRFQ---EYILAL---ADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDV 234 (389)
T ss_dssp EECCCSTTSSEEEEEEEEETTEEEEE---EEEEEE---CCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEE
T ss_pred EECCCChhhCEEEEEEEEcCCCcEEE---EEEEEe---cCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEE
Confidence 99999999999999999999987532 222232 356778878888888899999999988777777899999999
Q ss_pred eeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecc
Q psy12426 449 KPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNP 527 (616)
Q Consensus 449 ~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~ 527 (616)
+..+. .|.... .......++|.+|.+++.|.|+|.|.|..|.|.+|......+...
T Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~---------------------- 291 (389)
T 2jll_A 235 KEVASEIWKIVR-SHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV---------------------- 291 (389)
T ss_dssp EETTCSCCEEEE-CSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC----------------------
T ss_pred EECCCcccEEee-ccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC----------------------
Confidence 98876 776543 344567899999999999999999999999998887543322110
Q ss_pred eeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCCCeEE
Q psy12426 528 FITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRERTSGRWIK 605 (616)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~w~~ 605 (616)
.+|.+|. +.....+.+++.|+|.+|. +++++|.+|+|+|+..+..+|..
T Consensus 292 ---------------------------~~p~~p~-~~~~~~~~~~v~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~ 340 (389)
T 2jll_A 292 ---------------------------REPSPPS-IHGQPSSGKSFKLSITKQD-DGGAPILEYIVKYRSKDKEDQWL 340 (389)
T ss_dssp ---------------------------CCCCCCC-EEEEEETTTEEEEEECCCC-CCSSCCCEEEEEEEC-----CCB
T ss_pred ---------------------------CCCCCCc-cccccCcCCEEEEEEECCC-CCCCcccEEEEEEEeCCCCccee
Confidence 2355553 5566679999999999875 45899999999999888888874
No 9
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.98 E-value=1.6e-30 Score=285.04 Aligned_cols=406 Identities=13% Similarity=0.071 Sum_probs=255.3
Q ss_pred CceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcc--eeecCCCc--------eee----eecCcccccEEEEeeccCc
Q psy12426 86 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPH--IARAKKGK--------CYH----LVGTLLKDSIYEQLKRSGL 151 (616)
Q Consensus 86 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~--~~~~~~p~--------~~~----~~g~p~~~~~~~~~~~~~~ 151 (616)
..|.|.++...|.|.|+|.|.|..|........... ......|. .+. ..|.|.+.+.|++ ++..
T Consensus 306 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k--~g~~ 383 (816)
T 3dmk_A 306 GTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMK--DGKA 383 (816)
T ss_dssp TEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEE--TTEE
T ss_pred ceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEE--CCEE
Confidence 579999999999999999999988854332111100 00001111 111 2277888999998 4211
Q ss_pred ccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcC
Q psy12426 152 FDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAG 231 (616)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g 231 (616)
+......|.|.+++.+|.|.|+|.|.|..|....+ ..+.+.....+|.+. ..+....+..|
T Consensus 384 ---------------~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~---~~l~v~~~~~~p~i~-~~~~~~~v~~G 444 (816)
T 3dmk_A 384 ---------------IGHSESVLRIESVKKEDKGMYQCFVRNDRESAEAS---AELKLGGRFDPPVIR-QAFQEETMEPG 444 (816)
T ss_dssp ---------------CSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEEC---CEEECCCSSCCCEEE-EECCCEEECSS
T ss_pred ---------------CCCCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEE---EEEEEccccCCCceE-ecCcceEEcCC
Confidence 12234589999999999999999999988754322 234444445667664 34566788999
Q ss_pred CeEEEEEEEeeecCceeEEEECCeeecccCcEEEEe----c-CCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEE
Q psy12426 232 SNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVN----D-DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 306 (616)
Q Consensus 232 ~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~----~-~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v 306 (616)
+.+.|.|.+.+.|.+.+.|++++..+....++.... . .....|.|.++...|.|.|+|.|.|..|....+..+.+
T Consensus 445 ~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 524 (816)
T 3dmk_A 445 PSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNV 524 (816)
T ss_dssp SCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEE
Confidence 999999999999999999999999987766665432 1 22357999999999999999999999999888889998
Q ss_pred ecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC----CCEEEccccccceEEecccc-CCCeEEE
Q psy12426 307 LDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET----GRWVPMGDVSGTYTRAENLI-EGHDYNF 381 (616)
Q Consensus 307 ~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~----~~~~~~~~~~~~~~~i~~L~-~~~~y~~ 381 (616)
..+|..... .......+..+.|.|.... .+.. .+.|...+. ...... .....+.|.++. ..+.+.|
T Consensus 525 ~~~p~~~~~-~~~~v~~G~~v~l~C~~~g----~p~~--~i~W~k~~~~l~~~~~~~~--~~~~~l~i~~v~~~~d~G~Y 595 (816)
T 3dmk_A 525 YGLPYIRQM-EKKAIVAGETLIVTCPVAG----YPID--SIVWERDNRALPINRKQKV--FPNGTLIIENVERNSDQATY 595 (816)
T ss_dssp CSSCEECCC-CCEEEETTCCEEEECCEEC----SSEE--EEEEEETTEESCCSTTEEE--CTTSEEEESSCCHHHHCEEE
T ss_pred ecCCeeEcc-CCeEEecCCeEEEEEEecC----CCCC--EEEEEECCeEcccCCceEE--ecCCeEEEEecCccccCEEE
Confidence 877643322 2234566888999997532 2333 333332211 000111 123468888886 5788999
Q ss_pred EEEEEecCcCCCCccccCCEEccCCC-CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCC-----c
Q psy12426 382 RVKAVNKIGESLPLVCQSPITAKDPF-GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGP-----W 455 (616)
Q Consensus 382 ~v~a~n~~g~~~~~~~s~~~~~~~~~-~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~-----~ 455 (616)
+|.|.|..|..... ...+.+.... ..+..+.... ......+.|.+.....+.. ..+.|...+.. .
T Consensus 596 ~C~a~n~~g~~~~~--~~~v~v~~~p~~~~~~~~~~~--~~~G~~v~L~C~~~~~~~~-----~~i~W~~~g~~l~~~~~ 666 (816)
T 3dmk_A 596 TCVAKNQEGYSARG--SLEVQVMVLPRIIPFAFEEGP--AQVGQYLTLHCSVPGGDLP-----LNIDWTLDGQAISEDLG 666 (816)
T ss_dssp EEEEEESSSCEEEE--EEEEEEECCCCCBCCCCCSSC--EESSCEEEEEEBCCCSSSC-----CEEEEEETTBCCCGGGT
T ss_pred EEEEEECCCceeee--eEEEEEecCCccccccccccc--cCCCCeEEEEEEEeCCCCC-----CEEEEEECCeEcCCCCC
Confidence 99999998854321 1222222111 1111112222 2346789999985332211 13344444321 1
Q ss_pred eEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeec-------cccccceeeee----
Q psy12426 456 EKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVID-------QYALQDMTAQE---- 524 (616)
Q Consensus 456 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~-------~~~~~~~~v~~---- 524 (616)
............++|.++.......|++.|.|..|....+....+. .+|.+. ......+.|.|
T Consensus 667 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~------~~P~~~~~~~~~~v~~G~~v~l~C~~~g 740 (816)
T 3dmk_A 667 ITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVY------VPPRWILEPTDKAFAQGSDAKVECKADG 740 (816)
T ss_dssp CEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEE------EEEEEEECCCCEEEETTCCEEEECEEEE
T ss_pred eeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEE------eCCceeeecccceecCCCcEEEEEEEec
Confidence 1112233345679999999999999999999999876433322211 234332 11233444544
Q ss_pred -ecceeEEEeeCe
Q psy12426 525 -YNPFITLLFKNF 536 (616)
Q Consensus 525 -~~~~~~~~~~~~ 536 (616)
..|.++|.+++.
T Consensus 741 ~P~p~i~W~k~~~ 753 (816)
T 3dmk_A 741 FPKPQVTWKKAVG 753 (816)
T ss_dssp ESCCEEECCEECS
T ss_pred CCCCeEEEEecCC
Confidence 238999999765
No 10
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.97 E-value=1.1e-28 Score=262.81 Aligned_cols=435 Identities=11% Similarity=0.056 Sum_probs=274.1
Q ss_pred CceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee----------------------ccceEEEeecCCCCC-------
Q psy12426 10 GDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL----------------------RPIWEKCAQTEGDTP------- 60 (616)
Q Consensus 10 ~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~----------------------~G~Y~C~a~n~~~~~------- 60 (616)
....+.+|+.+.|.|.+.| |.|.|+|+|+|..+.. +|.|+|.|.|..+..
T Consensus 119 ~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l 197 (642)
T 1e07_A 119 NSKPVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVIL 197 (642)
T ss_pred CceeEecCCcEEEEEECCC-CCeeEEEEECCeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEE
Confidence 3466889999999999998 9999999999876531 899999999975531
Q ss_pred ------c-------------e--eEeeeccCCccc----eeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 61 ------K-------------G--KVLDLIEGNHPI----WEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 61 ------~-------------~--~v~~~~~~~~p~----w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
. + ..+.|...|.|. |++++........|.|.++...|.|.|+|.|.|..|....+
T Consensus 198 ~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s 277 (642)
T 1e07_A 198 NVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRT 277 (642)
T ss_pred EEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcccCCceEEecccccCCeEEEEEEEeCCCceEEe
Confidence 0 0 122333335554 99999887777899999999999999999999998865433
Q ss_pred CCCCcceeec-CCC-------c------eeee----ecCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEee
Q psy12426 116 DPTAPHIARA-KKG-------K------CYHL----VGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVL 177 (616)
Q Consensus 116 ~~~~~~~~~~-~~p-------~------~~~~----~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 177 (616)
.......... ..| . .+.+ .|.| +.+.|++ ++..+. ...... .......|.|.
T Consensus 278 ~~~~v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~--~g~~l~---~~~~~~----~~~~~~~L~i~ 347 (642)
T 1e07_A 278 TVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQN-TTYLWWV--NNQSLP---VSPRLQ----LSNDNRTLTLL 347 (642)
T ss_pred eeEEEEEEccCCCCEEEcCCceeEecCCcEEEEEECCCCC-ccEEEEE--CCccCC---CcCCEE----EeCCCCEEEEe
Confidence 1111100000 001 0 0111 1555 6899998 532221 111111 12234589999
Q ss_pred cccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeee
Q psy12426 178 DLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITI 257 (616)
Q Consensus 178 ~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~ 257 (616)
++..+|.|.|+|.|.|..|...... ..+.+. .+|.+....+....+..|+.+.|.|.+.+.|.+.+.|++++..+
T Consensus 348 ~~~~~d~G~Y~C~a~n~~g~~~s~~--~~l~V~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~ 422 (642)
T 1e07_A 348 SVTRNDVGPYECGIQNELSVDHSDP--VILNVL---YGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQ 422 (642)
T ss_pred ccCcccCeeEEEEEeCCCCCcceee--EEEEEE---cCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEc
Confidence 9999999999999999988643221 122222 22222122345677889999999999999999999999999876
Q ss_pred cccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceee--EEEEEecCCCCCCC-C-ccceeecCCeEEEEEeC
Q psy12426 258 ISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT--AKVTVLDIPSPPEG-P-LKPSNITKSSCNLEWRA 333 (616)
Q Consensus 258 ~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~--~~l~v~~~p~~p~~-~-~~~~~~~~~~~~l~W~~ 333 (616)
... ..|.|.++...|.|.|+|.|.|..|....+ ..+.+...+.+|.- . -......+..+.|.|..
T Consensus 423 ~~~-----------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~ 491 (642)
T 1e07_A 423 QHT-----------QELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEP 491 (642)
T ss_pred CCC-----------ceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEEC
Confidence 432 279999999999999999999998876544 44555543333321 0 11223467789999986
Q ss_pred CCCCCCCceEEEEEEEE--eCCCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCC-
Q psy12426 334 PRDDGGTDILHYVVEKM--DMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRP- 410 (616)
Q Consensus 334 ~~~~~~~~i~~y~v~~~--~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p- 410 (616)
.. +...+.+... ........... .....+.|.++...+.+.|+|.|.|..|..... ...+.+......+
T Consensus 492 ~~-----~~~~i~W~~~g~~l~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~--~~~l~V~~~p~~~~ 563 (642)
T 1e07_A 492 EA-----QNTTYLWWVNGQSLPVSPRLQLS-NGNRTLTLFNVTRNDARAYVCGIQNSVSANRSD--PVTLDVLYGPDTPI 563 (642)
T ss_pred CC-----CCcEEEEEECCEeCCCCCcEEEc-CCCcEEEEeecChhcCceEEEEeEcCCCCccCC--CEEEEEEeCCCcce
Confidence 41 1122222211 11111111111 123578999999999999999999998864321 1233332111111
Q ss_pred CCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCC
Q psy12426 411 DRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGG 490 (616)
Q Consensus 411 ~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G 490 (616)
..|.+.. ......+.|.+.....+ +. .+.|...+. .. .....+.|.++.+.....|.+.|.|..|
T Consensus 564 ~~~~~~~--v~~g~~~~l~C~~~g~p---~p---~v~W~~~g~------~i-~~~~~L~i~~~~~~d~G~Y~C~a~N~~G 628 (642)
T 1e07_A 564 ISPPDSS--YLSGANLNLSCHSASNP---SP---QYSWRINGI------PQ-QHTQVLFIAKITPNNNGTYACFVSNLAT 628 (642)
T ss_pred ecCCcee--EEcCCcEEEEEEeccCC---CC---eEEEEECCE------EC-ccCceEEECcccccCCeEEEEEEEeccc
Confidence 1122222 23456778887742211 11 344444442 11 1234788889999999999999999999
Q ss_pred CCCC
Q psy12426 491 PGEP 494 (616)
Q Consensus 491 ~g~~ 494 (616)
....
T Consensus 629 ~~~~ 632 (642)
T 1e07_A 629 GRNN 632 (642)
T ss_pred Ccce
Confidence 7543
No 11
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.97 E-value=2.3e-30 Score=257.15 Aligned_cols=285 Identities=16% Similarity=0.247 Sum_probs=202.6
Q ss_pred CCccCCCCCCceEe---cCCCeEEEEEEEeeecCCeeeeeeCCeeeee-----------------------ccceEEEee
Q psy12426 1 APHIDRRHLGDIKL---SAGTTLKFDANIIGEPVPHVDWRAGGNPLNL-----------------------RPIWEKCAQ 54 (616)
Q Consensus 1 ~P~i~~~~~~~~~v---~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~-----------------------~G~Y~C~a~ 54 (616)
+|.+..+ |.+..+ .+|+.+.|.|.+.|+|.|.|+|+|||..|.. +|.|+|.|.
T Consensus 5 ~P~f~~~-P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~ 83 (384)
T 3kld_A 5 GPVFVQE-PSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 83 (384)
T ss_dssp EEEEEEC-CCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEE
T ss_pred CCEEEeC-CcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEE
Confidence 3666655 777776 6899999999999999999999999987631 899999999
Q ss_pred cCCCCC---ce-------------------------eEeeec-cCCccc----eeeccccC---------CCCCceEecC
Q psy12426 55 TEGDTP---KG-------------------------KVLDLI-EGNHPI----WEKCAQTE---------GDTPKGKVLD 92 (616)
Q Consensus 55 n~~~~~---~~-------------------------~v~~~~-~~~~p~----w~~~~~~~---------~~~~~l~i~~ 92 (616)
|..|.. .. .++.|. ..+.|. |.+.+.+. .....|.|.+
T Consensus 84 N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~ 163 (384)
T 3kld_A 84 NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAK 163 (384)
T ss_dssp ETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEESS
T ss_pred cCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEee
Confidence 986641 00 111221 112222 88776542 2346799999
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCc-------------ceeecCCCcee--------e----eecCcccccEEEEee
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAP-------------HIARAKKGKCY--------H----LVGTLLKDSIYEQLK 147 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~-------------~~~~~~~p~~~--------~----~~g~p~~~~~~~~~~ 147 (616)
+...|.|.|+|.|.|..|.......... ..+....|..+ . ..|.|.+.+.|++
T Consensus 164 v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k-- 241 (384)
T 3kld_A 164 VEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRR-- 241 (384)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEE--
T ss_pred cCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEe--
Confidence 9999999999999998775321110000 00111122221 1 2288999999998
Q ss_pred ccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceE
Q psy12426 148 RSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIK 227 (616)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~ 227 (616)
.++.. .... . ........|.|.+++.+|.|.|+|.|.|..|....+ ..+.+ ..+|.+ ...+.+..
T Consensus 242 ~~~~~---~~~~-~----~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~---~~l~v---~~~P~~-~~~~~~~~ 306 (384)
T 3kld_A 242 ADGKP---IARK-A----RRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAK---GQLTF---YAQPNW-VQIINDIH 306 (384)
T ss_dssp TTCCC---CCTT-C----EECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEE---EEEEE---EEEEEE-EECCCCEE
T ss_pred CCCcc---cccc-c----eecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEE---EEEEE---ecCCcc-ccCCCceE
Confidence 53311 0111 1 112334589999999999999999999998864322 11222 234555 33456788
Q ss_pred EEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy12426 228 VRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 307 (616)
Q Consensus 228 v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 307 (616)
+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+.. + .|.|.++...|.|.|+|.|.|..|....++.|.|.
T Consensus 307 v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~-~---~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 307 VAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQ-G---TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp ECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEET-T---EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeC-C---EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 9999999999999999999999999999988777776543 2 89999999999999999999999999988888875
No 12
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.97 E-value=6.3e-28 Score=257.08 Aligned_cols=348 Identities=13% Similarity=0.096 Sum_probs=242.7
Q ss_pred CCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee-------------ccceEEEeecCCCCC---------------
Q psy12426 9 LGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL-------------RPIWEKCAQTEGDTP--------------- 60 (616)
Q Consensus 9 ~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~-------------~G~Y~C~a~n~~~~~--------------- 60 (616)
+.+..+.+|+.+.|.|.+.|+|.|.|+|+|+|..+.. +|.|+|.|.|..|..
T Consensus 210 ~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~ 289 (642)
T 1e07_A 210 PLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPP 289 (642)
T ss_pred cCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcccCCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCC
Confidence 5677899999999999999999999999999987632 999999999986530
Q ss_pred c-------------e--eEeeeccCCccc---eeeccccC---------CCCCceEecCcccCCeEEEEEEEEcCCCCCC
Q psy12426 61 K-------------G--KVLDLIEGNHPI---WEKCAQTE---------GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 113 (616)
Q Consensus 61 ~-------------~--~v~~~~~~~~p~---w~~~~~~~---------~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 113 (616)
. + ..+.|...|.|. |++++... .....|.|.++...|.|.|+|.|.|..|...
T Consensus 290 ~p~i~~~~~~~~~~g~~v~l~C~~~~~p~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 369 (642)
T 1e07_A 290 KPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDH 369 (642)
T ss_pred CCEEEcCCceeEecCCcEEEEEECCCCCccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcc
Confidence 0 0 112232224443 99987652 1346799999999999999999999988643
Q ss_pred CCCCCCcceeec------CCCc--------eee----eecCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEE
Q psy12426 114 PSDPTAPHIARA------KKGK--------CYH----LVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGK 175 (616)
Q Consensus 114 ~~~~~~~~~~~~------~~p~--------~~~----~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (616)
... ..+ .+.. ..|. .+. ..|.|.+.+.|++ ++..+ .....|.
T Consensus 370 s~~-~~l-~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~--~g~~~----------------~~~~~L~ 429 (642)
T 1e07_A 370 SDP-VIL-NVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLI--DGNIQ----------------QHTQELF 429 (642)
T ss_pred eee-EEE-EEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEE--CCEEc----------------CCCceEE
Confidence 221 111 1110 0111 111 1278888999998 41111 1234799
Q ss_pred eecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCe
Q psy12426 176 VLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDI 255 (616)
Q Consensus 176 i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~ 255 (616)
|.++...|.|.|+|.|.|..|....+. ...+.+.....+|.+.. .....+..|+.+.|.|.+.+ |.+.+.|++++.
T Consensus 430 i~~~~~~d~G~Y~C~a~n~~g~~~~s~-~~~v~v~~~~~~p~i~~--~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~ 505 (642)
T 1e07_A 430 ISNITEKNSGLYTCQANNSASGHSRTT-VKTITVSAELPKPSISS--NNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQ 505 (642)
T ss_pred EccCChhhCeEEEEEEEcCCCCCcccc-eEEEEEeccCCCceEec--CCceeecCCCeEEEEEECCC-CCcEEEEEECCE
Confidence 999999999999999999998654332 22344443344565532 34567889999999999984 788999999999
Q ss_pred eecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eeeEEEEEecCCCCCC-CCccceeecCCeEEEEEeC
Q psy12426 256 TIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAKVTVLDIPSPPE-GPLKPSNITKSSCNLEWRA 333 (616)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~l~v~~~p~~p~-~~~~~~~~~~~~~~l~W~~ 333 (616)
.+....++.+... ...|.|.++...|.|.|+|.|.|..|.. ...+.|.|...|..+. .+.......+..+.|.|..
T Consensus 506 ~l~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~ 583 (642)
T 1e07_A 506 SLPVSPRLQLSNG--NRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHS 583 (642)
T ss_pred eCCCCCcEEEcCC--CcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEe
Confidence 9887777766543 3489999999999999999999999875 3467888876654332 1122445567889999986
Q ss_pred CCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCCC
Q psy12426 334 PRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLP 394 (616)
Q Consensus 334 ~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~ 394 (616)
.... ... +.|...+.. . .....+.|.++...+.+.|+|.|.|..|....
T Consensus 584 ~g~p----~p~--v~W~~~g~~----i--~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 632 (642)
T 1e07_A 584 ASNP----SPQ--YSWRINGIP----Q--QHTQVLFIAKITPNNNGTYACFVSNLATGRNN 632 (642)
T ss_pred ccCC----CCe--EEEEECCEE----C--ccCceEEECcccccCCeEEEEEEEecccCcce
Confidence 4322 122 333222110 1 12357889999999999999999999997543
No 13
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.97 E-value=4.3e-29 Score=273.69 Aligned_cols=452 Identities=16% Similarity=0.144 Sum_probs=278.6
Q ss_pred CceEecCCCeEEEEEEEeeecCCeeeeeeCCee-------------------eee-------ccceEEEeecCCCC----
Q psy12426 10 GDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNP-------------------LNL-------RPIWEKCAQTEGDT---- 59 (616)
Q Consensus 10 ~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~-------------------l~~-------~G~Y~C~a~n~~~~---- 59 (616)
....+.+|+.+.|.|.+.|.|.|.|+|+|++.. |.+ +|.|+|.|.|..|.
T Consensus 256 ~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 335 (816)
T 3dmk_A 256 DMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVE 335 (816)
T ss_dssp EEEEECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred cceEEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCceEEE
Confidence 467899999999999999999999999995321 111 89999999998764
Q ss_pred --------------Cce--------eEeeeccCCccc----eeeccccC-CCCCceEecCcccCCeEEEEEEEEcCCCCC
Q psy12426 60 --------------PKG--------KVLDLIEGNHPI----WEKCAQTE-GDTPKGKVLDLIEGNQYEFRVLAVNKGGPG 112 (616)
Q Consensus 60 --------------~~~--------~v~~~~~~~~p~----w~~~~~~~-~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~ 112 (616)
+.. ..+.|...|.|. |++++... .....|.|.++...|.|.|+|.|.|..|..
T Consensus 336 ~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 415 (816)
T 3dmk_A 336 TVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESA 415 (816)
T ss_dssp EEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred EEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCCEEEEcCCCHHHCEEEEEEEECCCCcE
Confidence 110 112232224443 99998874 345689999999999999999999988865
Q ss_pred CCCCCCCc------ceeecC---------CCceee--eecCcccccEEEEeeccCcccccccCCCceEecc--cC-CCCC
Q psy12426 113 EPSDPTAP------HIARAK---------KGKCYH--LVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQ--TE-GDTP 172 (616)
Q Consensus 113 ~~~~~~~~------~~~~~~---------~p~~~~--~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~ 172 (616)
..+..... ..+... ....+. ..|.|.+.+.|++ ++..+. .......... .. ....
T Consensus 416 ~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~--~g~~l~---~~~~~~~~~~~~~~~~~~~ 490 (816)
T 3dmk_A 416 EASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWEL--DGKKIA---NNDRYQVGQYVTVNGDVVS 490 (816)
T ss_dssp EECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEE--TTEECC---SCTTEEEEEEECTTSCEEE
T ss_pred EEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEE--CCEECC---CCCCcccccEEecCCCcEE
Confidence 44421111 000000 001111 2288889999998 532221 1222221111 11 1223
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.++...|.|.|+|.|.|..|....+ ..+.+ ..+|.+ ..+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 491 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~---~~l~V---~~~p~~--~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k 562 (816)
T 3dmk_A 491 YLNITSVHANDGGLYKCIAKSKVGVAEHS---AKLNV---YGLPYI--RQMEKKAIVAGETLIVTCPVAGYPIDSIVWER 562 (816)
T ss_dssp EEEESSCCTTTCEEEEEEEEETTEEEEEE---EEEEE---CSSCEE--CCCCCEEEETTCCEEEECCEECSSEEEEEEEE
T ss_pred EEEEeeccccCCEEEEEEEEECCCeEEEE---EEEEE---ecCCee--EccCCeEEecCCeEEEEEEecCCCCCEEEEEE
Confidence 69999999999999999999998864322 11222 234443 23345678899999999999999999999999
Q ss_pred CCeeecccCcEEEEecCCceEEEecCCC-CCCcEEEEEEEEcCCCCc-eeeEEEEEecCCCCCCCC-ccceeecCCeEEE
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFDSK-RGDSGIYTLAVKNSWGTD-KGTAKVTVLDIPSPPEGP-LKPSNITKSSCNL 329 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~-~~~~g~y~c~a~n~~g~~-~~~~~l~v~~~p~~p~~~-~~~~~~~~~~~~l 329 (616)
++..+....+..+...+ .|.|.++. ..|.|.|+|.|.|..|.. .....+.+..+|...... .......+..+.|
T Consensus 563 ~~~~l~~~~~~~~~~~~---~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L 639 (816)
T 3dmk_A 563 DNRALPINRKQKVFPNG---TLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTL 639 (816)
T ss_dssp TTEESCCSTTEEECTTS---EEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEE
T ss_pred CCeEcccCCceEEecCC---eEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEE
Confidence 99988766666554443 89999998 589999999999998854 445666666665432211 2234556889999
Q ss_pred EEeCCCCCCCCceEEEEEEEEeCCCC-----CEEEc-cccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEc
Q psy12426 330 EWRAPRDDGGTDILHYVVEKMDMETG-----RWVPM-GDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITA 403 (616)
Q Consensus 330 ~W~~~~~~~~~~i~~y~v~~~~~~~~-----~~~~~-~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~ 403 (616)
.|...... ....+ .|...+.. .+... .......+.|.++...+.+.|+|.|.|..|..... ..+.+
T Consensus 640 ~C~~~~~~---~~~~i--~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~---~~l~V 711 (816)
T 3dmk_A 640 HCSVPGGD---LPLNI--DWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFT---TPLNV 711 (816)
T ss_dssp EEBCCCSS---SCCEE--EEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEE---EEECE
T ss_pred EEEEeCCC---CCCEE--EEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEE---EEEEE
Confidence 99864332 11122 22222111 11111 11234578999999999999999999998875432 12222
Q ss_pred cCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC----CceEeE---eecCCccEEEcCCCCCC
Q psy12426 404 KDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG----PWEKAC---IVPANITATSVPDLKEG 476 (616)
Q Consensus 404 ~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~----~~~~~~---~~~~~~~~~~l~~L~p~ 476 (616)
..+...-..|.+..+ .....+.|.......+ .- .|.|...+. ...... ........+.|.++...
T Consensus 712 ~~~P~~~~~~~~~~v--~~G~~v~l~C~~~g~P----~p--~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 783 (816)
T 3dmk_A 712 YVPPRWILEPTDKAF--AQGSDAKVECKADGFP----KP--QVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKT 783 (816)
T ss_dssp EEEEEEEECCCCEEE--ETTCCEEEECEEEEES----CC--EEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGG
T ss_pred EeCCceeeeccccee--cCCCcEEEEEEEecCC----CC--eEEEEecCCCCCccccccccCCCEEecCCEEEECcCChh
Confidence 110000011222221 2344455555421111 11 122222211 000000 00001347889999999
Q ss_pred CeEEEEEEEEcCCCCCC
Q psy12426 477 EEYEFRVIAVNKGGPGE 493 (616)
Q Consensus 477 t~Y~~~v~a~n~~G~g~ 493 (616)
..-.|.+.|.|..|...
T Consensus 784 d~G~Y~C~a~N~~G~~~ 800 (816)
T 3dmk_A 784 NEGYYLCEAINGIGSGL 800 (816)
T ss_dssp GCEEEEEEEECSSSSCE
T ss_pred hCeEEEEEEEeCCCCCc
Confidence 99999999999999865
No 14
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.97 E-value=1.8e-28 Score=234.95 Aligned_cols=271 Identities=18% Similarity=0.135 Sum_probs=206.0
Q ss_pred CcceEEEcCCeEEEEEEEeee-------cCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCC
Q psy12426 223 LSDIKVRAGSNFEFDINVIGE-------PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSW 295 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~-------p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 295 (616)
+.+..+..|+++.|.|.+.+. |.+.+.|.+++..+..+ ++.+. ++....|.|.++... .|.|+|.|.+.
T Consensus 11 P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~-~~~~~~L~i~~~~~~-~g~Y~C~a~~~- 86 (303)
T 1i1r_A 11 PESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTII-NRTASSVTFTDIASL-NIQLTCNILTF- 86 (303)
T ss_dssp SSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEE-ETTEEEEEECSCCCS-EEEEEEEEEET-
T ss_pred cCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeee-CCcEEEEEEcCcCCC-ceEEEEecccC-
Confidence 456789999999999999964 77899999999987544 44443 334568999999987 59999999884
Q ss_pred CCc---eeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEE-ccccccceEEec
Q psy12426 296 GTD---KGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVP-MGDVSGTYTRAE 371 (616)
Q Consensus 296 g~~---~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~-~~~~~~~~~~i~ 371 (616)
|.. .....+.+..+|.+|.+ +.+.......+.|+|.++.+.+ .+..|.|+++......|.. ........+.+.
T Consensus 87 g~~~~~~~~~~l~v~~~P~~P~~-l~~~~~~~~~v~l~W~~~~~~~--~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~ 163 (303)
T 1i1r_A 87 GQLEQNVYGITIISGLPPEKPKN-LSCIVNEGKKMRCEWDGGRETH--LETNFTLKSEWATHKFADCKAKRDTPTSCTVD 163 (303)
T ss_dssp TTEEEEEEEEEEEEECCCCCCEE-EEEEEETTSCCEEEEECCSCCS--SCCEEEEEEEETTEECCCEECCSSCTTEEECS
T ss_pred CCcceEEEEEEEeccCCCCCCee-eEEEECCCCcEEEEccCCCCCC--CCcCEEEEEEecCCCCccCCCcCCCceEEEEC
Confidence 433 23455667778888877 6676777789999999876543 3579999997653322211 122445789999
Q ss_pred cc-cCCCeEEEEEEEEecCcCCCCccccCCEEc-cCCCCCCCCCCCCEEEEe--cCCeEEEEecCCCCCCCCcceeEEEE
Q psy12426 372 NL-IEGHDYNFRVKAVNKIGESLPLVCQSPITA-KDPFGRPDRPGQPTVTDW--GKDHVDLEWTPPKKDGGSPISQYIIE 447 (616)
Q Consensus 372 ~L-~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~-~~~~~~p~~p~~~~~~~~--~~~~v~l~W~~p~~~~~~~i~~Y~i~ 447 (616)
+| .+++.|.|+|.|.|..|.+... ...+ .....+|++|.++.+... +.+++.|+|.+|...++ .+.+|+|+
T Consensus 164 ~L~~p~t~Y~f~V~A~N~~G~~~s~----~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~ 238 (303)
T 1i1r_A 164 YSTVYFVNIEVWVEAENALGKVTSD----HINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQ 238 (303)
T ss_dssp SCCCTTSCEEEEEEEEETTEEEECC----CEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGGT-SCEEEEEE
T ss_pred CcCcccccEEEEEEEEcCCCCcccC----CEEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCCCc-ccEEEEEE
Confidence 99 8999999999999999987532 1121 112246788888887654 67899999998876444 79999999
Q ss_pred EeeCCC-CceEeEee--cCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEecc
Q psy12426 448 KKPKYG-PWEKACIV--PANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 448 ~~~~~~-~~~~~~~~--~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
|+..++ .|...... ......++|.+|.|++.|.|+|+|.|..|.|++|..+..+...+
T Consensus 239 y~~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T 299 (303)
T 1i1r_A 239 YRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGIT 299 (303)
T ss_dssp EEETTCSSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEEC
T ss_pred EEeCCCCCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeC
Confidence 998876 78765321 44567999999999999999999999999999999888766654
No 15
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.96 E-value=3.8e-26 Score=242.40 Aligned_cols=375 Identities=16% Similarity=0.203 Sum_probs=231.3
Q ss_pred CCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEE----cCC--
Q psy12426 159 PIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVR----AGS-- 232 (616)
Q Consensus 159 ~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~----~g~-- 232 (616)
..|..... .....+.|.+|.++..|.|+|.|.|..|....+.....+.......+|. .+.++.+. ...
T Consensus 212 ~~w~~v~~--~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~----~P~~l~~~~~~~~~~g~ 285 (680)
T 1zlg_A 212 THWQTVAQ--TTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPP----APANLRLANSTVNSDGS 285 (680)
T ss_pred CceEEEEe--cCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCC----CCCceEeeeeeecCCCc
Confidence 46766543 3456799999999999999999999998433333333333321111221 12333332 223
Q ss_pred -eEEEEEEEeeecC-----ceeEEEEC--Cee-ecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEE
Q psy12426 233 -NFEFDINVIGEPI-----PTKEWLCN--DIT-IISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAK 303 (616)
Q Consensus 233 -~~~l~c~~~~~p~-----~~~~W~~~--~~~-~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~ 303 (616)
.+.|.+.....+. ..+.|... +.. ............+....+.|.+|.+...|.|++.|.|..|.+..+..
T Consensus 286 ~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 365 (680)
T 1zlg_A 286 VTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSA 365 (680)
T ss_pred eEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCC
Confidence 5555554221111 13444421 110 00111222233344568999999999999999999998887643332
Q ss_pred ---EEEecCCCCC--CCCccceeecCCeEEE-----------EEeCCCCCCCCceEEEEEEEEeCCCCC-------E---
Q psy12426 304 ---VTVLDIPSPP--EGPLKPSNITKSSCNL-----------EWRAPRDDGGTDILHYVVEKMDMETGR-------W--- 357 (616)
Q Consensus 304 ---l~v~~~p~~p--~~~~~~~~~~~~~~~l-----------~W~~~~~~~~~~i~~y~v~~~~~~~~~-------~--- 357 (616)
+.+...+..| .+ +.+......++.| .|.+|... ..+..|.|.|....... |
T Consensus 366 ~~~v~~~T~~~~P~p~~-l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~~--~~~~~y~v~w~~~~~~~v~~Y~V~w~~~ 442 (680)
T 1zlg_A 366 KVSLHFTSTHATNNKEQ-LVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQ--DGQLQVKVYWKKTEDPTVNRYHVRWFPE 442 (680)
T ss_pred ceeEEEECCCCCCCccc-cccccccCccccccccccCCCccccccCCccc--CCcceEEEEEeCCCCCccceEEEEEeee
Confidence 5554443333 33 4555555666655 99877532 23567888776543221 1
Q ss_pred ---------EE--ccccccceEEeccccCCCeEEEEEEEEecCcCCCCccc---c-----------CCEEccCC-----C
Q psy12426 358 ---------VP--MGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVC---Q-----------SPITAKDP-----F 407 (616)
Q Consensus 358 ---------~~--~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~---s-----------~~~~~~~~-----~ 407 (616)
.. ........+.+.+|.+++.|.|+|.|.|..|.+..... + ..+..... .
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~~~~~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~ 522 (680)
T 1zlg_A 443 ACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLS 522 (680)
T ss_pred ecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCCccccceeCCCccccccCCccccccCCCCccccc
Confidence 11 11234567899999999999999999999996532110 0 01111100 0
Q ss_pred CCCCCCCC----CEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-C----ceEe-----EeecCCccEEEcCCC
Q psy12426 408 GRPDRPGQ----PTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-P----WEKA-----CIVPANITATSVPDL 473 (616)
Q Consensus 408 ~~p~~p~~----~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~----~~~~-----~~~~~~~~~~~l~~L 473 (616)
..+.+|.+ +.+...+.+ +.|+|.+|..+.++.|++|.|+|+...+ . +... ..++++...++|.+|
T Consensus 523 ~v~~~P~~l~~~v~v~~~~~t-i~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 601 (680)
T 1zlg_A 523 KVLAKPENLSASFIVQDVNIT-GHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNL 601 (680)
T ss_pred cccCCccccceeEEEeccCce-EEEEecCCCCCCCCCceeEEEEEEEccCCCccccccceeeecccccCCcccEEEecCC
Confidence 12366777 455555555 9999998865445689999999986532 1 1111 123356789999999
Q ss_pred CCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeee
Q psy12426 474 KEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYI 553 (616)
Q Consensus 474 ~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (616)
.|++.|.|+|+|.|..|.|+. ....+.|.
T Consensus 602 ~p~t~Y~~~V~A~n~~G~G~~-~~~~~~T~-------------------------------------------------- 630 (680)
T 1zlg_A 602 RPSTLYRLEVQVLTPGGEGPA-TIKTFRTP-------------------------------------------------- 630 (680)
T ss_pred CCCceEEEEEEEEcCCCcCCC-cceEEECC--------------------------------------------------
Confidence 999999999999999999987 33222211
Q ss_pred ecCCCCCCCCeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEeec
Q psy12426 554 DNVPGKPSKPEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRER 598 (616)
Q Consensus 554 ~~~~~~P~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~ 598 (616)
..+|.+|..+.+...+ .|+|++|....+.+|.+|.|.|+-.
T Consensus 631 ~~~P~~P~~l~v~~~~----~l~W~pP~~~~G~~I~~~~~~~~~~ 671 (680)
T 1zlg_A 631 ELPPSSAHRSHLKHRH----PHHYKPSPERYGKPIPNPLLGLDST 671 (680)
T ss_pred CCCCCCCCCCeEEecc----ceeECCCCCCCCCccceeeEEEeec
Confidence 1346777777765543 8999999888799999999999844
No 16
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.96 E-value=4.1e-28 Score=233.43 Aligned_cols=279 Identities=13% Similarity=0.109 Sum_probs=202.4
Q ss_pred cceEEEcCCeEEEEEEEeee-----cCceeEEEECCeeecccCcEEEEecCC-ceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 224 SDIKVRAGSNFEFDINVIGE-----PIPTKEWLCNDITIISKDRFKIVNDDK-STKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 224 ~~~~v~~g~~~~l~c~~~~~-----p~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
.+..+..|+++.|.|.+.+. |.+.+.|.+++..+.. .++.....+. ...|+|.+++..|.|.|+|.+.+..+.
T Consensus 8 ~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~ 86 (313)
T 2d9q_B 8 SAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPG-GRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQ 86 (313)
T ss_dssp SCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTT-CEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEE
T ss_pred CCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCc-cceEEEecCeEEEEEEEeccCCCccceEEeeecCCCce
Confidence 45678899999999999997 5789999999987743 3322222222 268999999999999999998664444
Q ss_pred ceeeEEEEEecCCCCCCCCccceee-cCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC------CCEEEccc-cccceEE
Q psy12426 298 DKGTAKVTVLDIPSPPEGPLKPSNI-TKSSCNLEWRAPRDDGGTDILHYVVEKMDMET------GRWVPMGD-VSGTYTR 369 (616)
Q Consensus 298 ~~~~~~l~v~~~p~~p~~~~~~~~~-~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~------~~~~~~~~-~~~~~~~ 369 (616)
....+.+.+..+|.+|.+ +.+... ....+.++|.++.+. +. ...|.|+++.... ..|..+.. .....+.
T Consensus 87 ~~~~~~l~v~~~P~~P~~-l~c~~~~~~~~~~~~W~~~~~~-~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (313)
T 2d9q_B 87 ILDQVELRAGYPPAIPHN-LSCLMNLTTSSLICQWEPGPET-HL-PTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCS 163 (313)
T ss_dssp EEEEEEEEECCCCCCCEE-EEEEEETTTTEEEEEEECCSCC-SS-CCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEEE
T ss_pred eEEEEEEccCCCCCCCcc-ceeeECCCCccEEEEecCCCCC-CC-ceeEEEEEEecCCCcccCCcccccCCCCCCCcEEE
Confidence 445667777888888876 666555 357999999976653 33 4569999876532 33554432 2223445
Q ss_pred e--ccccCCCeEEEEEEEEecCcCCCCccccCCEEccC-CCCCCCCCCCCEEEEe------cCCeEEEEecCCCCCCCCc
Q psy12426 370 A--ENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKD-PFGRPDRPGQPTVTDW------GKDHVDLEWTPPKKDGGSP 440 (616)
Q Consensus 370 i--~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~-~~~~p~~p~~~~~~~~------~~~~v~l~W~~p~~~~~~~ 440 (616)
+ .+|.+++.|.|+|.|.|..|.+.. ..+.+.. ...+|++|.++.+... ..+++.|+|++|.. ++..
T Consensus 164 ~~~~~L~~~~~Y~f~V~A~N~~G~~~s----~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~-~~~~ 238 (313)
T 2d9q_B 164 IPRKHLLLYQNMGIWVQAENALGTSMS----PQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP-GLHI 238 (313)
T ss_dssp EEGGGCCSSSCEEEEEEEEETTEEEEC----CCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGG-GTTS
T ss_pred ECccccccceeEEEEEEEECCCCCccC----ccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCC-CCce
Confidence 5 569999999999999999998532 2222222 2245888888776655 46899999998764 3434
Q ss_pred ceeEEEEEe-eCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCe
Q psy12426 441 ISQYIIEKK-PKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPV 511 (616)
Q Consensus 441 i~~Y~i~~~-~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~ 511 (616)
+.+|+|+|+ ..++ .|............++|.+|.|++.|.|||+|.|..|.|.+|..+......+...+|.
T Consensus 239 ~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P~ 311 (313)
T 2d9q_B 239 NQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAAA 311 (313)
T ss_dssp CEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC----
T ss_pred eEEEEEEEccCCCCCCcEEcccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCCC
Confidence 679999999 5554 8887655555678899999999999999999999999999998888888777666664
No 17
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.96 E-value=2e-27 Score=236.46 Aligned_cols=282 Identities=17% Similarity=0.208 Sum_probs=201.9
Q ss_pred CCccCCCCCCceEe---cCCCeEEEEEEEeeecCCeeeeeeCCeeeee-----------------------ccceEEEee
Q psy12426 1 APHIDRRHLGDIKL---SAGTTLKFDANIIGEPVPHVDWRAGGNPLNL-----------------------RPIWEKCAQ 54 (616)
Q Consensus 1 ~P~i~~~~~~~~~v---~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~-----------------------~G~Y~C~a~ 54 (616)
||.|..+ |.+..+ .+|+.|.|.|.+.|+|.|.|+|+|+|..+.. +|.|+|.|.
T Consensus 4 ~P~~~~~-p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~ 82 (382)
T 1cs6_A 4 GPVFEEQ-PAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVAT 82 (382)
T ss_dssp EEEEEEC-CCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEEE
T ss_pred CCEEEEC-CCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEEE
Confidence 5777755 778776 7999999999999999999999999886531 899999999
Q ss_pred cCCCCC-------------------c-------e--eEeeec-cCCccc----eeeccccC-----------CCCCceEe
Q psy12426 55 TEGDTP-------------------K-------G--KVLDLI-EGNHPI----WEKCAQTE-----------GDTPKGKV 90 (616)
Q Consensus 55 n~~~~~-------------------~-------~--~v~~~~-~~~~p~----w~~~~~~~-----------~~~~~l~i 90 (616)
|..|.. . + ..+.|. ..+.|. |.+.+... .....|.|
T Consensus 83 n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i 162 (382)
T 1cs6_A 83 NARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYI 162 (382)
T ss_dssp ETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEE
T ss_pred cCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEE
Confidence 986530 0 0 111222 233343 98876542 22367999
Q ss_pred cCcccCCeEEEEEEEEcCCCCCCCCC---CCC-----------cceeecCCCceee------------eecCcccccEEE
Q psy12426 91 LDLIEGNQYEFRVLAVNKGGPGEPSD---PTA-----------PHIARAKKGKCYH------------LVGTLLKDSIYE 144 (616)
Q Consensus 91 ~~l~~~~~~~y~c~a~n~~g~~~~~~---~~~-----------~~~~~~~~p~~~~------------~~g~p~~~~~~~ 144 (616)
.++...|.|.|+|.|.|..|...... ... ...+....|.... ..|.|.+.+.|+
T Consensus 163 ~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~ 242 (382)
T 1cs6_A 163 AKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWR 242 (382)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEE
T ss_pred EeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEE
Confidence 99999999999999999875322110 000 0011111222211 227788899999
Q ss_pred EeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCc
Q psy12426 145 QLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLS 224 (616)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~ 224 (616)
+ .++.+. . ........|.|.++...|.|.|+|.|.|..|..... ..+.+ ..+|.+. ..+.
T Consensus 243 ~--~~~~~~---~--------~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~---~~l~V---~~~p~~~-~~~~ 302 (382)
T 1cs6_A 243 K--LDGSQT---S--------KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQ---GRIII---HAQPDWL-DVIT 302 (382)
T ss_dssp E--CCSCCS---C--------CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEE---EEEEE---EEEEEEE-ECCC
T ss_pred E--CCcccc---c--------EEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEE---EEEEE---ecCCCcc-cCCC
Confidence 8 533322 0 122345689999999999999999999998863321 11222 2345553 3345
Q ss_pred ceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy12426 225 DIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 304 (616)
Q Consensus 225 ~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l 304 (616)
...+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+.. ..|.|.++...|.|.|+|.|.|..|....++.|
T Consensus 303 ~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~----~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 378 (382)
T 1cs6_A 303 DTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSG----GELRFSKLVLEDSGMYQCVAENKHGTVYASAEL 378 (382)
T ss_dssp CEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEET----TEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEEC----CEEEECcCCcccCEEEEEEEEeCCCeEEEEEEE
Confidence 6789999999999999999999999999999988777776642 289999999999999999999999999888888
Q ss_pred EEe
Q psy12426 305 TVL 307 (616)
Q Consensus 305 ~v~ 307 (616)
.|.
T Consensus 379 ~V~ 381 (382)
T 1cs6_A 379 TVQ 381 (382)
T ss_dssp EEE
T ss_pred EEe
Confidence 775
No 18
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.95 E-value=1.2e-26 Score=220.67 Aligned_cols=264 Identities=14% Similarity=0.232 Sum_probs=196.1
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.+... |.++.+.+|+.+.|.|.+.|.|.|.|+|+|++..+...+.|.....
T Consensus 5 pP~~~~~-p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~-------------------------- 57 (284)
T 2rik_A 5 PPFFDLK-PVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLV-------------------------- 57 (284)
T ss_dssp CCEEEEC-CCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEE--------------------------
T ss_pred CCEEEcc-ccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEc--------------------------
Confidence 5777644 8899999999999999999999999999999999887777755431
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCc----ceeecCCC-------ceee----eecCcccccEEEE
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP----HIARAKKG-------KCYH----LVGTLLKDSIYEQ 145 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~----~~~~~~~p-------~~~~----~~g~p~~~~~~~~ 145 (616)
.....|.|.++...|.|.|+|.|.|..|.......... .......+ ..+. ..|.|.+.+.|++
T Consensus 58 --~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~ 135 (284)
T 2rik_A 58 --ENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK 135 (284)
T ss_dssp --TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEE
T ss_pred --CCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEE
Confidence 12468999999999999999999998886432210000 00000011 0111 2278888999998
Q ss_pred eeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcc
Q psy12426 146 LKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSD 225 (616)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~ 225 (616)
++..+. ....... ........|.|.++...|.|.|+|.|.|..|....+ ..+.+ ..+|.+. ..+..
T Consensus 136 --~~~~~~---~~~~~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~---~~l~V---~~~p~~~-~~~~~ 201 (284)
T 2rik_A 136 --DETEIQ---ESSKFRM--SFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSS---TSLKV---KEPPVFR-KKPHP 201 (284)
T ss_dssp --TTEECC---CSSSEEE--EEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEE---EEEEE---ECCCBCC-SCCCC
T ss_pred --CCEECc---CCCcEEE--EEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEE---EEEEE---ecCCcce-eCCCc
Confidence 533222 1122211 112344579999999999999999999988753321 11222 2456653 34566
Q ss_pred eEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEE
Q psy12426 226 IKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVT 305 (616)
Q Consensus 226 ~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~ 305 (616)
..+..|+.+.|.|.+.+.|.+.+.|++++..+..+.++.+...+....|.|.++...|.|.|+|.|.|..|.....+.|.
T Consensus 202 ~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 281 (284)
T 2rik_A 202 VETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSIT 281 (284)
T ss_dssp EEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEE
Confidence 78899999999999999999999999999999888888887777778999999999999999999999999988888887
Q ss_pred Ee
Q psy12426 306 VL 307 (616)
Q Consensus 306 v~ 307 (616)
|.
T Consensus 282 V~ 283 (284)
T 2rik_A 282 LK 283 (284)
T ss_dssp EC
T ss_pred Ec
Confidence 65
No 19
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.95 E-value=4e-25 Score=232.91 Aligned_cols=377 Identities=10% Similarity=0.025 Sum_probs=236.4
Q ss_pred CCCCceEecCCCeEEEEEEEeeecCC---eeeeeeCCee---------------------------------eee-----
Q psy12426 7 RHLGDIKLSAGTTLKFDANIIGEPVP---HVDWRAGGNP---------------------------------LNL----- 45 (616)
Q Consensus 7 ~~~~~~~v~~g~~v~l~C~~~g~P~p---~v~W~~~~~~---------------------------------l~~----- 45 (616)
..|+++.+.+|+.|.|.|.+.|.|.| .|.|+|++.. |.+
T Consensus 5 ~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~ 84 (585)
T 2ocw_A 5 FGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQ 84 (585)
T ss_pred cCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCc
Confidence 35889999999999999999998765 7999998742 212
Q ss_pred --ccceEEEeecCCCC------------------Cc------e--eEeee-ccCCccc----eeeccccCC---------
Q psy12426 46 --RPIWEKCAQTEGDT------------------PK------G--KVLDL-IEGNHPI----WEKCAQTEG--------- 83 (616)
Q Consensus 46 --~G~Y~C~a~n~~~~------------------~~------~--~v~~~-~~~~~p~----w~~~~~~~~--------- 83 (616)
+|.|+|.|.|..+. +. + ..+.| ..++.|. |++.+....
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~ 164 (585)
T 2ocw_A 85 DDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGY 164 (585)
T ss_pred ccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcc
Confidence 99999999988554 10 1 12233 2323322 988764210
Q ss_pred -------------CC-----CceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceee--------e---e
Q psy12426 84 -------------DT-----PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYH--------L---V 134 (616)
Q Consensus 84 -------------~~-----~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~--------~---~ 134 (616)
.. ..|.|.++...|.|.|+|.|.|..|..... ..+ .+....|..+. + +
T Consensus 165 ~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~--~~l-~V~~~~p~~~~~~~G~~v~l~C~~ 241 (585)
T 2ocw_A 165 VNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKN--ADL-QVLKPEPELVYEDLRGSVTFHCAL 241 (585)
T ss_pred cCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccce--EEE-EEccCCCceeEEcCCCcEEEEEEc
Confidence 01 169999999999999999999988875443 211 12222232221 1 2
Q ss_pred cCcc---cccEEEEeeccCc-cccccc---------CCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCC
Q psy12426 135 GTLL---KDSIYEQLKRSGL-FDQFHL---------CPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 201 (616)
Q Consensus 135 g~p~---~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s 201 (616)
+.+. ..+.|+. .+|. .+.... .+..........+...|.|.++...|.|.|+|.|.|. |....+
T Consensus 242 ~~~~~~~~~~~w~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~ 318 (585)
T 2ocw_A 242 GPEVANVAKFLCRQ--SSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEG 318 (585)
T ss_pred CCCCCCceEEEEEe--CCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCcccc
Confidence 4444 5667763 2331 000000 1111111111122237999999999999999999995 433221
Q ss_pred CCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCcee----EEEE--CCe--eecc---------cCcEE
Q psy12426 202 DPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTK----EWLC--NDI--TIIS---------KDRFK 264 (616)
Q Consensus 202 ~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~----~W~~--~~~--~~~~---------~~~~~ 264 (616)
.....+.+.. ..+|.+ ...+....+.+|+.+.|.|.+.+.|.+.+ .|++ ++. .+.. ..++.
T Consensus 319 ~~~~~~~l~V-~~~p~~-~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~ 396 (585)
T 2ocw_A 319 SPIQAWQLFV-NEESTI-PRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLS 396 (585)
T ss_pred CceeeEEEEE-eccccc-ccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEE
Confidence 1111122211 234555 34457788999999999999999999877 7999 876 4432 23444
Q ss_pred EEec--CCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCce
Q psy12426 265 IVND--DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDI 342 (616)
Q Consensus 265 ~~~~--~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i 342 (616)
+... .+...|.|.++...|.|.|+|.| |..|.....+.|.+...|.....+.......+..+.|.|.......+.+.
T Consensus 397 ~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~ 475 (585)
T 2ocw_A 397 LLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEK 475 (585)
T ss_pred EeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCcc
Confidence 4432 23345999999999999999999 88888888888888764333222334556678889999986433222233
Q ss_pred EEEEEEEEeCCCCC-----------EEEcc-ccccceEEeccccCCCeEEEEEEEEecCcCCCC
Q psy12426 343 LHYVVEKMDMETGR-----------WVPMG-DVSGTYTRAENLIEGHDYNFRVKAVNKIGESLP 394 (616)
Q Consensus 343 ~~y~v~~~~~~~~~-----------~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~ 394 (616)
. .+.|...+... ..... ......+.|.++...+.+.|+|.|.|..|.+..
T Consensus 476 ~--~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 537 (585)
T 2ocw_A 476 Y--WCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGET 537 (585)
T ss_pred E--EEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEE
Confidence 3 33333221110 11111 122357999999999999999999999986543
No 20
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.95 E-value=1e-26 Score=233.20 Aligned_cols=337 Identities=14% Similarity=0.153 Sum_probs=217.8
Q ss_pred CCCCCceEecCCCeEEEEEEEee-ecCCeeeeeeCCeeeee--ccceEEEeecCCCCCceeEeeeccCCccceeeccccC
Q psy12426 6 RRHLGDIKLSAGTTLKFDANIIG-EPVPHVDWRAGGNPLNL--RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTE 82 (616)
Q Consensus 6 ~~~~~~~~v~~g~~v~l~C~~~g-~P~p~v~W~~~~~~l~~--~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~ 82 (616)
...|.++.+.+|+.|.|.|.+.+ .|.|.|+|+|+|..+.. .+++..
T Consensus 25 ~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~------------------------------- 73 (403)
T 3laf_A 25 VSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQ------------------------------- 73 (403)
T ss_dssp EECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEE-------------------------------
T ss_pred EeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEE-------------------------------
Confidence 35699999999999999999876 78899999999998863 222211
Q ss_pred CCCCceEecCc-----ccCCeEEEEEEEEcCCCCCCCCCCCCcc----eeecCCCceee------------eecCccccc
Q psy12426 83 GDTPKGKVLDL-----IEGNQYEFRVLAVNKGGPGEPSDPTAPH----IARAKKGKCYH------------LVGTLLKDS 141 (616)
Q Consensus 83 ~~~~~l~i~~l-----~~~~~~~y~c~a~n~~g~~~~~~~~~~~----~~~~~~p~~~~------------~~g~p~~~~ 141 (616)
.....+.|.++ ...|.|.|+|.|.|..+....+...... ......+..+. ..|.|.+.+
T Consensus 74 ~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v 153 (403)
T 3laf_A 74 LPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTI 153 (403)
T ss_dssp CTTSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEE
T ss_pred ecCCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeE
Confidence 12345666666 7789999999999754433222111100 00011111111 227788899
Q ss_pred EEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCC--Ccee
Q psy12426 142 IYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVS--PYIN 219 (616)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~--P~~~ 219 (616)
.|++ ++..+....... .. .......|.|.++..+|.|.|+|.|.|..|...... ..+.+...+.. +...
T Consensus 154 ~W~~--~~~~~~~~~~~~---~~--~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~--~~l~v~~~p~~~~~~~~ 224 (403)
T 3laf_A 154 HWQK--NQQDLNPIPGDS---RV--VVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNE--AEVRILSDPGLHRQLYF 224 (403)
T ss_dssp EEEE--SSSBCCCCTTCC---SE--EECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCC--EEEEEECCCCCCEEEEE
T ss_pred EEEE--CCEeccccCCce---EE--EEcCCceEEEcccccccCEEEEEEEEcCCCceeccc--eeEEEecCCCcccCceE
Confidence 9999 533322101111 11 112344799999999999999999999876533222 12222221111 1111
Q ss_pred ccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccC-cEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 220 RDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD-RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 220 ~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++..... ..|.|.++...|.|.|+|.|.|..|..
T Consensus 225 ~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 301 (403)
T 3laf_A 225 LQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGG---SNLLISNVTDDDSGTYTCVVTYKNENI 301 (403)
T ss_dssp EECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETT---TEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred ecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCc---cEEEEeCCCHHHCEEEEEEEEcCCCce
Confidence 344566788999999999999999999999999998876443 3333322 389999999999999999999999988
Q ss_pred eeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC----CCEEEccccccceEEecccc
Q psy12426 299 KGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET----GRWVPMGDVSGTYTRAENLI 374 (616)
Q Consensus 299 ~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~----~~~~~~~~~~~~~~~i~~L~ 374 (616)
.....+.+..+|.....+.......+..+.|.|...... ... +.|...+. ...... .....+.|.++.
T Consensus 302 ~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p----~p~--v~W~~~g~~~~~~~~~~~--~~~~~L~i~~v~ 373 (403)
T 3laf_A 302 SASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKP----VPT--VNWMKNGDVVIPSDYFQI--VGGSNLRILGVV 373 (403)
T ss_dssp EEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEES----CCE--EEEEETTEECCCSSSEEE--ETTTEEEESSCC
T ss_pred EEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeecc----CCE--EEEEECCEECCCCCcEEE--ecCccEEEeccc
Confidence 888888887766433222223445567788888753221 112 23322111 010010 123568899999
Q ss_pred CCCeEEEEEEEEecCcCCC
Q psy12426 375 EGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 375 ~~~~y~~~v~a~n~~g~~~ 393 (616)
..+.+.|+|.|.|..|...
T Consensus 374 ~~d~G~Y~C~a~N~~G~~~ 392 (403)
T 3laf_A 374 KSDEGFYQCVAENEAGNAQ 392 (403)
T ss_dssp GGGCEEEEEEEEETTEEEE
T ss_pred cccCEEEEEEEEcCCceEE
Confidence 9999999999999998754
No 21
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.95 E-value=2.9e-27 Score=249.25 Aligned_cols=435 Identities=18% Similarity=0.165 Sum_probs=272.6
Q ss_pred cCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccccCCCCCceEec-Cc
Q psy12426 15 SAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTEGDTPKGKVL-DL 93 (616)
Q Consensus 15 ~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~~~~~~l~i~-~l 93 (616)
.++....|+|...+.....++|......-. ...|........ .....| ........++.|. ++
T Consensus 102 pP~~P~nl~c~~~~~~~~~~~W~~~~~~~~-~~~y~l~~~~~~----~~~~~c-----------~~~~~~~~~c~~~~~l 165 (589)
T 3l5h_A 102 PPEKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWAT----HKFADC-----------KAKRDTPTSCTVDYST 165 (589)
T ss_dssp CCCCCEEEEEEEETTSCEEEEEECCSCCSS-CEEEEECCBCSS----SBCCCE-----------ECBTTBSSCCBCCSCC
T ss_pred CCCCCEeeEEEECCCceEEEEECCCCcCCc-CceEEEEEEEcC----CCcccC-----------CCCCCCcEEEEECCCC
Confidence 345677899998877777899987543211 123333211110 000011 0011123455566 78
Q ss_pred ccCCeEEEEEEEEcCCCCCCCCCC--CCcceeecCCCceeee--e-----------------cCcccccEEEEeeccCcc
Q psy12426 94 IEGNQYEFRVLAVNKGGPGEPSDP--TAPHIARAKKGKCYHL--V-----------------GTLLKDSIYEQLKRSGLF 152 (616)
Q Consensus 94 ~~~~~~~y~c~a~n~~g~~~~~~~--~~~~~~~~~~p~~~~~--~-----------------g~p~~~~~~~~~~~~~~~ 152 (616)
.+...|.|+|.|.|..|.+.+... .....+...+|.++.+ . +.++..|.+++ +
T Consensus 166 ~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~--~---- 239 (589)
T 3l5h_A 166 VYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQY--R---- 239 (589)
T ss_dssp CSSSCEEECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEE--E----
T ss_pred chheeEEEEEEEEeCCCCcccccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEE--C----
Confidence 899999999999999998644311 1112234555655443 1 34556677777 3
Q ss_pred cccccCCCceEecc--cCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceE-E-
Q psy12426 153 DQFHLCPIWEKCAQ--TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIK-V- 228 (616)
Q Consensus 153 ~~~~~~~~~~~~~~--~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~-v- 228 (616)
. .....|..... .......+.|.+|.++..|.|++.|.|..|.+..+.++..+........|.. .+.... +
T Consensus 240 ~--~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~---~p~~~~~v~ 314 (589)
T 3l5h_A 240 T--KDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSK---APSFWYKID 314 (589)
T ss_dssp E--TTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCS---CCCEEEECC
T ss_pred C--CCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCC---CCcEEEEee
Confidence 1 23345665422 2345678999999999999999999999998877766665555544443421 111111 1
Q ss_pred ----EcCCeEEEEEEEee--ec---Cc--eeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 229 ----RAGSNFEFDINVIG--EP---IP--TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 229 ----~~g~~~~l~c~~~~--~p---~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
.....+.+.+.... .. .. .+.|...+... . . .......+.+ +.+...|.+++.|.|..|.
T Consensus 315 ~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~~---~--~--~~~~~~~~~~--l~~~~~Y~~~V~A~n~~G~ 385 (589)
T 3l5h_A 315 PSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHL---Q--N--YTVNATKLTV--NLTNDRYLATLTVRNLVGK 385 (589)
T ss_dssp SCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSCC---C--B--CCCSSSCCEE--CCCSSCCCEEEEEEBTTBC
T ss_pred cCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCCCc---e--e--eccCCceEEE--EeCCCCEEEEEEEEeCCcc
Confidence 11234555443210 00 01 22332222110 0 0 1111223333 6688999999999999887
Q ss_pred ceeeEEEEEecC----CCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-----CCEEEccccccceE
Q psy12426 298 DKGTAKVTVLDI----PSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET-----GRWVPMGDVSGTYT 368 (616)
Q Consensus 298 ~~~~~~l~v~~~----p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~-----~~~~~~~~~~~~~~ 368 (616)
+..+.. .+... |.++.. +.+.. ..+++.|+|.++.. .+.+|.|+++.... ..|..........+
T Consensus 386 ~~~s~~-~~~~~~~~~~~p~~~-l~~~~-~~~si~l~W~~p~~----~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (589)
T 3l5h_A 386 SDAAVL-TIPACDFQATHPVMD-LKAFP-KDNMLWVEWTTPRE----SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTY 458 (589)
T ss_dssp CCCCCC-CCCCTTCCCCSCCCS-CEEEE-CSSSEEEECCCCSS----CCSCBCCEEEEECSSSCCCEEECCBCSSCCEEE
T ss_pred CCCeEE-EeecccccCCCCcce-EEEEE-CCCeEEEEEECCCC----CccEEEEEEEECCCCCCCccCcEEeeCCcceEE
Confidence 755432 22222 222222 44443 36899999997643 67889999886543 23444444445567
Q ss_pred EeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCC-CCCCCcceeEEEE
Q psy12426 369 RAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPK-KDGGSPISQYIIE 447 (616)
Q Consensus 369 ~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~-~~~~~~i~~Y~i~ 447 (616)
.+.+|.+++.|.|+|.|.|..|.+..+ .+...+....|.+|.++.+...+.+++.|+|.+|. ...++.|.+|.|+
T Consensus 459 ~~~~L~p~t~Y~~~V~A~~~~g~g~~~----~~~~~t~~~~P~~pp~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~ 534 (589)
T 3l5h_A 459 LRGNLAESKCYLITVTPVYADGPGSPE----SIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIF 534 (589)
T ss_dssp CCSCCCSSSEEEEEECBEETTEECCCE----EEEEESSCCCCSSCCCCCEECCCSSCBEEBCCCCCHHHHCSCEEEEEEC
T ss_pred ehhccccCcEEEEEEEEEeCCcccCCE----EEEEEeccCCCCCCCeEEEeecccceEEEEecCCCHHHcCccceeEEEE
Confidence 779999999999999999999987653 23444566778788889999899999999999753 3444579999999
Q ss_pred EeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCC
Q psy12426 448 KKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASA 499 (616)
Q Consensus 448 ~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~ 499 (616)
|+..++ .| ..........++|.+|.|++.|.|+|+|.|..| |.+|....
T Consensus 535 ~~~~~~~~~--~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-~~~S~~~~ 584 (589)
T 3l5h_A 535 YRTIIGNET--AVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFT 584 (589)
T ss_dssp CBCSSCCCC--CEEECTTCCBCCBCSCCSSCCEECCEEEEETTE-EEECCCCE
T ss_pred EEeCCCCeE--EEEeCCcccEEEecCCCCCCEEEEEEEEEeCCC-CCCCCCeE
Confidence 988776 44 234566788999999999999999999999999 87776543
No 22
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.95 E-value=4.3e-26 Score=228.03 Aligned_cols=348 Identities=14% Similarity=0.126 Sum_probs=224.1
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEee-ecCCeeeeeeCCeeeeeccc-eEEEeecCCCCCceeEeeeccCCccceeec
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIG-EPVPHVDWRAGGNPLNLRPI-WEKCAQTEGDTPKGKVLDLIEGNHPIWEKC 78 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g-~P~p~v~W~~~~~~l~~~G~-Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~ 78 (616)
||.|... |.++.+.+|+.+.|.|.+.| .|.|.|+|+|+|..+..... +.-
T Consensus 6 ~P~~~~~-p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~--------------------------- 57 (395)
T 1bih_A 6 YPVLKDQ-PAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAAL--------------------------- 57 (395)
T ss_dssp CCEECCC-CSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEE---------------------------
T ss_pred CCEeecC-CCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEE---------------------------
Confidence 6888755 88999999999999999998 99999999999998874221 110
Q ss_pred cccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCccee-ecCCC---c--------eee----e-ecCccccc
Q psy12426 79 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA-RAKKG---K--------CYH----L-VGTLLKDS 141 (616)
Q Consensus 79 ~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~-~~~~p---~--------~~~----~-~g~p~~~~ 141 (616)
.....+|.|.++...|.|.|+|.|.|..|...... ...... ...++ . .+. + .|.|.+.+
T Consensus 58 ---~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~-~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v 133 (395)
T 1bih_A 58 ---RKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRV-ISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLI 133 (395)
T ss_dssp ---CTTSCCEEESSCCGGGCEEEEEEEEETTEEEECCC-EEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEE
T ss_pred ---ecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeEE-EEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeE
Confidence 12356899999999999999999999888654221 111111 11111 1 111 1 16678899
Q ss_pred EEEEeecc-CcccccccCCCceEecccCCCCCeEEeecccCCCeE---EEEEEEEeCCCCCCCCCCCCCEEeccc-----
Q psy12426 142 IYEQLKRS-GLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQY---EFRVLAVNKGGPGEPSDPTAPHIARAK----- 212 (616)
Q Consensus 142 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~---~y~c~a~n~~g~~~~s~~~~~~~~~~~----- 212 (616)
.|++ ++ +... ......+... ........|.|.++...|.| .|+|.|.|..|..........+.....
T Consensus 134 ~W~~--~~~~~~~-~~~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~ 209 (395)
T 1bih_A 134 TWKK--RLSGADP-NADVTDFDRR-ITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGY 209 (395)
T ss_dssp EEEE--EETTSCG-GGCCCCCCTT-EEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCC
T ss_pred EEEe--cCCCcCc-cccccccccc-EEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccc
Confidence 9999 42 1111 0000000000 01122347999999999999 999999998887432110000000000
Q ss_pred --cCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccC--cEEEEecCCceEEEecCCCCCCcEEEE
Q psy12426 213 --KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD--RFKIVNDDKSTKLKVFDSKRGDSGIYT 288 (616)
Q Consensus 213 --~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~l~~~~~g~y~ 288 (616)
..+|.+ .+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++..........|.|.++...|.|.|+
T Consensus 210 ~~~~~p~~---~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 286 (395)
T 1bih_A 210 KGEPVPQY---VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYT 286 (395)
T ss_dssp CCCCEEEE---ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEE
T ss_pred cCCcCcee---cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEE
Confidence 012322 2456789999999999999999999999999998876543 333222233458999999999999999
Q ss_pred EEEEcCCCCcee-eEEEEEecCCCCCCCCcc-ceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccc
Q psy12426 289 LAVKNSWGTDKG-TAKVTVLDIPSPPEGPLK-PSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGT 366 (616)
Q Consensus 289 c~a~n~~g~~~~-~~~l~v~~~p~~p~~~~~-~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~ 366 (616)
|.|.|..|.... .+.|.|..+|.....+.. .....+..+.|.|....... ..+.+|. ........... ....
T Consensus 287 C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~v~W~~-~g~~~~~~~~~----~~~~ 360 (395)
T 1bih_A 287 CEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPA-PNVVWSH-NAKPLSGGRAT----VTDS 360 (395)
T ss_dssp EEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESC-CCCEEEE-TTEECCSSSEE----EETT
T ss_pred EEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccC-CeeEEEE-CCEECCCCceE----EECC
Confidence 999999988655 788888876654333222 34456778889887532211 1122111 00011111111 1123
Q ss_pred eEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 367 YTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 367 ~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
.+.|.++...+.+.|+|.|.|..|...
T Consensus 361 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 387 (395)
T 1bih_A 361 GLVIKGVKNGDKGYYGCRATNEHGDKY 387 (395)
T ss_dssp EEEESSCCSTTCEEEEEEEEETTEEEE
T ss_pred EEEEeeCCcccCEEEEEEEEccCCCce
Confidence 799999999999999999999998743
No 23
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.95 E-value=3.9e-27 Score=236.36 Aligned_cols=346 Identities=15% Similarity=0.095 Sum_probs=224.1
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|...++.++.|.+|+.|.|.|.+.|+|.|.|+|+|+|..+.....+.-..
T Consensus 16 ~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~--------------------------- 68 (404)
T 3p3y_A 16 PPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSM--------------------------- 68 (404)
T ss_dssp CCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBC---------------------------
T ss_pred CCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceE---------------------------
Confidence 68888777889999999999999999999999999999999876322111000
Q ss_pred cCCCCCceEec----CcccCCeEEEEEEEEcCCCCCCCCCCCCc---------------ceeecCCCceee--e-ecCcc
Q psy12426 81 TEGDTPKGKVL----DLIEGNQYEFRVLAVNKGGPGEPSDPTAP---------------HIARAKKGKCYH--L-VGTLL 138 (616)
Q Consensus 81 ~~~~~~~l~i~----~l~~~~~~~y~c~a~n~~g~~~~~~~~~~---------------~~~~~~~p~~~~--~-~g~p~ 138 (616)
......|.|. ++...|.|.|+|.|.|..|...... ... ..+....+..+. . .|.|.
T Consensus 69 -~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~-~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~ 146 (404)
T 3p3y_A 69 -RRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNR-IRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPS 146 (404)
T ss_dssp -CSSSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEE-EEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSC
T ss_pred -ecCCceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeee-EEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCC
Confidence 1123344443 7888999999999999888653210 000 000001111111 1 26788
Q ss_pred cccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCC-eEEEEEEEEeCCCCCCCCCCCCCEEecc----cc
Q psy12426 139 KDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGN-QYEFRVLAVNKGGPGEPSDPTAPHIARA----KK 213 (616)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~-~~~y~c~a~n~~g~~~~s~~~~~~~~~~----~~ 213 (616)
+.+.|++ +++.. ........ ......|.|.++...| .|.|+|.|.|..|..........+.+.. ..
T Consensus 147 ~~v~W~~--~~~~~---~~~~~~~~----~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~ 217 (404)
T 3p3y_A 147 PVIFWMS--SSMEP---ITQDKRVS----QGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAE 217 (404)
T ss_dssp CEEEEEC--TTSCB---CCCCSSEE----ECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCC
T ss_pred CeEEEeC--CCccc---cCCCCcEE----EcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccc
Confidence 8899988 53211 11111111 1234479999999999 5999999999887643222223333322 12
Q ss_pred CCCceecc--CCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEE
Q psy12426 214 VSPYINRD--QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAV 291 (616)
Q Consensus 214 ~~P~~~~~--~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a 291 (616)
.+|.+... ......+..|+.+.|.|.+.+.|.+.+.|++++..+..... .... ....|.|.++...|.|.|+|.|
T Consensus 218 ~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~~~--~~~~L~i~~~~~~d~G~Y~C~a 294 (404)
T 3p3y_A 218 RTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKA-KFEN--FNKALRITNVSEEDSGEYFCLA 294 (404)
T ss_dssp CCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTE-EEEG--GGTEEEESSCCGGGCEEEEEEE
T ss_pred cCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcc-cccc--cCceEEEccCCHhHCEEEEEEE
Confidence 24444221 12356788999999999999999999999999988765443 2222 2348999999999999999999
Q ss_pred EcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCC----CEEEccccccce
Q psy12426 292 KNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETG----RWVPMGDVSGTY 367 (616)
Q Consensus 292 ~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~----~~~~~~~~~~~~ 367 (616)
.|..|.......+.+..+|.....+.......+..+.|.|...... ... +.|...+.. ............
T Consensus 295 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p----~p~--v~W~~~g~~~~~~~~~~~~~~~~~~ 368 (404)
T 3p3y_A 295 SNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNP----KPT--VQWMVNGEPLQSAPPNPNREVAGDT 368 (404)
T ss_dssp ECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEES----CCE--EEEEETTEEGGGSCCCTTEEEETTE
T ss_pred EeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccccC----CCc--eEEEECCEecCCCCCCceEEecCCE
Confidence 9999988888888888766433322234445577888998753221 112 223221110 000000012347
Q ss_pred EEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 368 TRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 368 ~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
+.|.++...+.+.|+|.|.|..|...
T Consensus 369 L~i~~v~~~d~G~Y~C~a~N~~G~~~ 394 (404)
T 3p3y_A 369 IIFRDTQISSRAVYQCNTSNEHGYLL 394 (404)
T ss_dssp EEESSCCSSCCCEEEEEEEETTEEEE
T ss_pred EEEeecCHHHCEEEEEEEEeCCCcEE
Confidence 89999999999999999999998754
No 24
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.94 E-value=2.3e-26 Score=229.31 Aligned_cols=342 Identities=14% Similarity=0.094 Sum_probs=216.4
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeee-CCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRA-GGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~-~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
||.+..++...+.+.+|+.+.|.|.+.|.|.|.|+|+| ||..+.....+.-
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~---------------------------- 54 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQ---------------------------- 54 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBE----------------------------
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceE----------------------------
Confidence 57888775556778999999999999999999999999 7877763221111
Q ss_pred ccCCCCCceEecCcccCC------eEEEEEEEEcCCCCCCCCCCCCcce-eec---CCCc--------eeee----ecC-
Q psy12426 80 QTEGDTPKGKVLDLIEGN------QYEFRVLAVNKGGPGEPSDPTAPHI-ARA---KKGK--------CYHL----VGT- 136 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~------~~~y~c~a~n~~g~~~~~~~~~~~~-~~~---~~p~--------~~~~----~g~- 136 (616)
....++|.|.++...| .|.|+|.|.|..|...... ..... ... ..+. .+.+ .+.
T Consensus 55 --~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~-~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~ 131 (388)
T 2v5m_A 55 --ISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRD-VHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFV 131 (388)
T ss_dssp --ECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCC-EEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTT
T ss_pred --EcCCceEEecccChhhccccccCceEEEEEEccCCeEEecc-eEEEEccccccccCccceeeecCCcEEEEEECcCCC
Confidence 1124679999999887 9999999999988642211 11100 000 0011 1111 132
Q ss_pred --cccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCe-EEEEEEEEeCCCCCC-CCCCCCCEEeccc
Q psy12426 137 --LLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQ-YEFRVLAVNKGGPGE-PSDPTAPHIARAK 212 (616)
Q Consensus 137 --p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~-~~y~c~a~n~~g~~~-~s~~~~~~~~~~~ 212 (616)
+.+.+.|++ +++.+. ........ .........|.|.+++.+|. |.|+|.|.|..+... .+.....+.+...
T Consensus 132 ~~~~~~v~W~~--~~~~~~--~~~~~~~~-~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~ 206 (388)
T 2v5m_A 132 ADFVEVVSWHT--DEEENY--FPGAEYDG-KYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEP 206 (388)
T ss_dssp TTTEEEEEEEE--TTCCEE--CSSSCBTT-TEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECC
T ss_pred CCCcceEEEEe--CCCccc--ccccCCCC-cEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecC
Confidence 336799998 533221 00000000 00112234799999999999 999999999865322 1211112332211
Q ss_pred --cCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeee------cccCcEEEEecCCceEEEecCCCCCCc
Q psy12426 213 --KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITI------ISKDRFKIVNDDKSTKLKVFDSKRGDS 284 (616)
Q Consensus 213 --~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~------~~~~~~~~~~~~~~~~l~i~~l~~~~~ 284 (616)
...|.+.........+..|+.+.|.|.+.+.|.+.+.|++++..+ ....++... ...|.|.++...|.
T Consensus 207 ~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~ 282 (388)
T 2v5m_A 207 ISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQV----SGTLIIKDAVVEDS 282 (388)
T ss_dssp CSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEE----TTEEEESSCCGGGC
T ss_pred CcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecc----cCEEEECcCCHHHC
Confidence 112222222234467889999999999999999999999975332 122333322 23899999999999
Q ss_pred EEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccc
Q psy12426 285 GIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVS 364 (616)
Q Consensus 285 g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~ 364 (616)
|.|+|.|.|..|.......|.+..+|.....+.......+..+.|.|...... ... +.|...+. .. ...
T Consensus 283 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p----~p~--i~W~~~g~----~i-~~~ 351 (388)
T 2v5m_A 283 GKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNP----IKT--VSWMKDGK----AI-GHS 351 (388)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEEC----CCE--EEEEETTE----EC-SCC
T ss_pred eEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEecccc----CCe--EEEEECCE----EC-ccC
Confidence 99999999999988888888887765432222223445577888998753221 112 33322211 01 123
Q ss_pred cceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 365 GTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 365 ~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
...+.|.++...+.+.|+|.|.|..|...
T Consensus 352 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 380 (388)
T 2v5m_A 352 ESVLRIESVKKEDKGMYQCFVRNDRESAE 380 (388)
T ss_dssp SSEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCEEEEecCChhhCEEEEEEEEcCCCcEE
Confidence 46799999999999999999999998643
No 25
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.94 E-value=2.4e-26 Score=238.61 Aligned_cols=294 Identities=12% Similarity=0.068 Sum_probs=193.9
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeee---------e-------ccceEEEeecCCCC-----
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLN---------L-------RPIWEKCAQTEGDT----- 59 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~---------~-------~G~Y~C~a~n~~~~----- 59 (616)
||+|... +.++.+.+|+.++|.|.+.| .|+|+|++..+. + +|.|+|.|.| |.
T Consensus 36 pP~i~~~-~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n--g~~~~~~ 108 (524)
T 2ec8_A 36 PPSIHPG-KSDLIVRVGDEIRLLCTDPG----FVKWTFEILDETNENKQNEWITEKAEATNTGKYTCTNKH--GLSNSIY 108 (524)
T ss_dssp CCEEESC-CSEEECCTTSCEEEEEECTT----EEEEEEESSSCCEEECSSEEEESSCCSTTCEEEEEEETT--SCEEEEE
T ss_pred CCccCCC-CceEEEeCCCeEEEEEeCCc----eEEEcCCCccccccCccceEEEcccchhhCEEEEEeecC--CcceEEE
Confidence 6777754 67899999999999999887 899999987541 1 9999999999 32
Q ss_pred -----Cc-------------e--eEeeeccCCcc-c---eee-ccccC--------CCCCceEecCcccCCeE-EEEEEE
Q psy12426 60 -----PK-------------G--KVLDLIEGNHP-I---WEK-CAQTE--------GDTPKGKVLDLIEGNQY-EFRVLA 105 (616)
Q Consensus 60 -----~~-------------~--~v~~~~~~~~p-~---w~~-~~~~~--------~~~~~l~i~~l~~~~~~-~y~c~a 105 (616)
|. + ..+.|...|.| . |++ ++... .....|.|.++...|.| .|+|.|
T Consensus 109 l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a 188 (524)
T 2ec8_A 109 VFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSV 188 (524)
T ss_dssp EECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEE
T ss_pred EEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEE
Confidence 00 0 12233222444 2 977 55543 23467899999999999 999999
Q ss_pred EcCCCCCCCCCC-CCcc------eeecCCCceee------------eecCcccc-cEEEEeeccCcccccccCCCceEec
Q psy12426 106 VNKGGPGEPSDP-TAPH------IARAKKGKCYH------------LVGTLLKD-SIYEQLKRSGLFDQFHLCPIWEKCA 165 (616)
Q Consensus 106 ~n~~g~~~~~~~-~~~~------~~~~~~p~~~~------------~~g~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (616)
.|..|....... ..+. ......|.... ..|.|.+. +.|++ ++..++ ..........
T Consensus 189 ~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~--~~~~~~--~~~~~~~~~~ 264 (524)
T 2ec8_A 189 DQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKR--ENSQTK--LQEKYNSWHH 264 (524)
T ss_dssp C----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEE--TTCSCC--CCEEEEEEEC
T ss_pred EECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEe--CCCCCc--cccccccccc
Confidence 998775543110 1110 00001111111 22777776 99999 533210 0000000000
Q ss_pred c--cCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceecc--CCcceEEEcCCeEEEEEEEe
Q psy12426 166 Q--TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRD--QLSDIKVRAGSNFEFDINVI 241 (616)
Q Consensus 166 ~--~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~--~~~~~~v~~g~~~~l~c~~~ 241 (616)
. .......|.|.++..+|.|.|+|.|.|..|..... ..+.+ ..+|.+... ......+..|+.+.|.|.+.
T Consensus 265 ~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~---~~l~V---~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~ 338 (524)
T 2ec8_A 265 GDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVT---TTLEV---VDKGFINIFPMINTTVFVNDGENVDLIVEYE 338 (524)
T ss_dssp SSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEE---EEEEE---ESSCEEEEEESSCSEEEECTTCCEEEEEEEE
T ss_pred cCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEE---EEEEE---eccCceEeecCCCceEEEcCCCcEEEEEEEe
Confidence 0 11224589999999999999999999988864321 12222 245555322 22468899999999999999
Q ss_pred eecCce-eEEEECCeeecccC-cEEEEecC----CceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCC
Q psy12426 242 GEPIPT-KEWLCNDITIISKD-RFKIVNDD----KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPS 311 (616)
Q Consensus 242 ~~p~~~-~~W~~~~~~~~~~~-~~~~~~~~----~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~ 311 (616)
+.|.+. +.|++++..+.... ++.....+ ....|.|.++...|.|.|+|.|.|..|....++.|.|..+|.
T Consensus 339 g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~ 414 (524)
T 2ec8_A 339 AFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPE 414 (524)
T ss_dssp EESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEE
T ss_pred ecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCe
Confidence 999999 99999998876554 33322222 246899999999999999999999999988888888876654
No 26
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.94 E-value=1.3e-24 Score=215.29 Aligned_cols=266 Identities=19% Similarity=0.294 Sum_probs=202.5
Q ss_pred ecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEE
Q psy12426 267 NDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYV 346 (616)
Q Consensus 267 ~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~ 346 (616)
.......+.|.+|.+...|.|++.|.|..|.+...........| +|.+ +.+......++.|+|.++. +..+.+|.
T Consensus 54 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~p-~p~~-l~~~~~~~~si~l~W~~~~---~~~i~~Y~ 128 (375)
T 3t1w_A 54 VHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVP-QLTD-LSFVDITDSSIGLRWTPLN---SSTIIGYR 128 (375)
T ss_dssp EETTCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECCCCC-CCSC-CEEECCCSSEEEEECCCCC---CTTEEEEE
T ss_pred cCCCccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCCCC-CCce-EEEEecCCCeEEEEEECCC---CCCceEEE
Confidence 33455689999999999999999999987765444333333344 3544 6777788899999999763 34799999
Q ss_pred EEEEeCCCCC-E-EEccccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCC
Q psy12426 347 VEKMDMETGR-W-VPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKD 424 (616)
Q Consensus 347 v~~~~~~~~~-~-~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~ 424 (616)
|+++..+... + ..........+.+.+|.+++.|.|+|.|.|..|.+.++. ....+ .|.+|.++.+...+.+
T Consensus 129 v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~----~~~~t---~~~~p~~l~~~~~~~~ 201 (375)
T 3t1w_A 129 ITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTT----LTQQT---AVPPPTDLRFTNIGPD 201 (375)
T ss_dssp EEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEE----EEEEC---CCCCCEEEEEESCCSS
T ss_pred EEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCee----eeeec---CCCCCceeEEEecccC
Confidence 9998755432 2 223335567899999999999999999999999877642 22222 4457888998888999
Q ss_pred eEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEE
Q psy12426 425 HVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 425 ~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~ 502 (616)
++.|+|.+|. ++.+.+|.|+|+..++ .|.. .........+++.+|.|++.|.|+|+|.|..|.|.++.. .
T Consensus 202 si~l~W~~p~---~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~----~ 273 (375)
T 3t1w_A 202 TMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAE-LSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRG----R 273 (375)
T ss_dssp CEEEEEECCS---SCCCCEEEEEEEEGGGTTCCEE-EEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEE----E
T ss_pred EEEEEEcCCC---CCCccEEEEEEEeCCCCCCcEE-EEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCceee----E
Confidence 9999999763 2458999999988764 3443 345566789999999999999999999999998764421 1
Q ss_pred eccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCCCC
Q psy12426 503 CKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQPIS 582 (616)
Q Consensus 503 ~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p~~ 582 (616)
. .+.|.+|.++++...+.+++.|+|++|
T Consensus 274 ~--------------------------------------------------~t~p~~P~~l~~~~~~~~sv~l~W~~p-- 301 (375)
T 3t1w_A 274 Q--------------------------------------------------KTGLDSPTGIDFSDITANSFTVHWIAP-- 301 (375)
T ss_dssp E--------------------------------------------------ECCCCCCEEEEEESCCSSCEEEEEECC--
T ss_pred E--------------------------------------------------ecCCCCCCccEeeeccCCEEEEEECCC--
Confidence 1 145678888888888999999999998
Q ss_pred CCCCceeeeEEEEeecCC-CCeEEc
Q psy12426 583 NGGSAIKGYEVERRERTS-GRWIKI 606 (616)
Q Consensus 583 ~~~~~i~~Y~i~~~~~~~-~~w~~~ 606 (616)
.+.+.+|+|.|+..++ +.|...
T Consensus 302 --~~~~~~Y~v~~~~~~~~~~~~~~ 324 (375)
T 3t1w_A 302 --RATITGYRIRHHPEHFSGRPRED 324 (375)
T ss_dssp --SSCCSEEEEEEEETTCCSSCEEE
T ss_pred --CcceeeEEEEEEECCCCCcceeE
Confidence 3789999999998775 555443
No 27
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.94 E-value=4e-24 Score=226.91 Aligned_cols=211 Identities=16% Similarity=0.223 Sum_probs=158.2
Q ss_pred CcEEEEEEEEcCCCCceeeEEEEEecCCCCC-CCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-------
Q psy12426 283 DSGIYTLAVKNSWGTDKGTAKVTVLDIPSPP-EGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET------- 354 (616)
Q Consensus 283 ~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p-~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~------- 354 (616)
..|.+.| +.|..|..-......+...|.+| .+ +.+.....+++.|+|.++.+.++..+. |.|+++...+
T Consensus 134 c~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~~~-l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~~ 210 (680)
T 1zlg_A 134 CSGVKKC-CSNGCGHTCQVPKTLYKGVPLKPRKE-LRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSEDD 210 (680)
T ss_pred CCCcccc-ccccccccccccceeeeccccccccc-ceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCccc
Confidence 4566666 45555654222233356778888 55 788888999999999987655566777 9999987532
Q ss_pred -CCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEe--cCC---eEEE
Q psy12426 355 -GRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDW--GKD---HVDL 428 (616)
Q Consensus 355 -~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~--~~~---~v~l 428 (616)
..|..........+.+.+|.+++.|.|+|.|.|..|.+..+..+..+.......+|.+|.++.+... +.+ ++.|
T Consensus 211 ~~~w~~v~~~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l 290 (680)
T 1zlg_A 211 ATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTI 290 (680)
T ss_pred cCceEEEEecCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEE
Confidence 5687776656678999999999999999999999995444433444443323367889999999888 788 9999
Q ss_pred EecCCCCCCCCcceeEEEEEeeC-C----C---CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCC
Q psy12426 429 EWTPPKKDGGSPISQYIIEKKPK-Y----G---PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKAS 498 (616)
Q Consensus 429 ~W~~p~~~~~~~i~~Y~i~~~~~-~----~---~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~ 498 (616)
+|.+|...+ ++|.+|.|+|+.. + . .|.. ..+.++...++|.+|.|++.|.|+|+|+|..|.|+++...
T Consensus 291 ~W~pP~~~~-g~i~~Y~V~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 366 (680)
T 1zlg_A 291 VWDLPEEPD-IPVHHYKVFWSWMVSSKSLVPTKKKRR-KTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAK 366 (680)
T ss_pred EecCCCCCC-CceeEEEEEEEecccccccCCccceEE-EEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCc
Confidence 999876544 5799999999822 1 1 3444 3445567899999999999999999999999999988763
No 28
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.6e-25 Score=214.97 Aligned_cols=268 Identities=18% Similarity=0.209 Sum_probs=175.6
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|.. .|.++.+.+|+.+.|.|.+.|.|.|.|+|+|+|..+. .+.|......
T Consensus 6 ~P~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~-~~~~~~~~~~------------------------- 58 (304)
T 2yd9_A 6 PPRFIK-EPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVN-SQRFETIEFD------------------------- 58 (304)
T ss_dssp CCEEEE-CCCCEEEETTSCEEEEEEEECSSCCEEEEC--------CTTEEEEEET-------------------------
T ss_pred CCeeee-cCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECC-CCceEEEEec-------------------------
Confidence 677774 4889999999999999999999999999999999886 4454433211
Q ss_pred cCCCCCceEecCccc-CCeEEEEEEEEcCCCCCCCCCCCCcce---------eecCCCce--------ee----eecCcc
Q psy12426 81 TEGDTPKGKVLDLIE-GNQYEFRVLAVNKGGPGEPSDPTAPHI---------ARAKKGKC--------YH----LVGTLL 138 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~-~~~~~y~c~a~n~~g~~~~~~~~~~~~---------~~~~~p~~--------~~----~~g~p~ 138 (616)
......|.|.++.. .|.|.|+|.|.|..|.........+.. .....|.. +. ..|.|.
T Consensus 59 -~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~ 137 (304)
T 2yd9_A 59 -ESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPD 137 (304)
T ss_dssp -TTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSC
T ss_pred -CCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCC
Confidence 11235799999997 999999999999988744331111000 00011111 11 227888
Q ss_pred cccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCce
Q psy12426 139 KDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYI 218 (616)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~ 218 (616)
+.+.|++ ++..+. .......... .....|.|.++..+|.|.|+|.|.|..|....+. ..+.+.....+|.+
T Consensus 138 ~~v~W~k--~~~~~~---~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~--~~l~v~~~~~~P~~ 208 (304)
T 2yd9_A 138 PEITWFK--DFLPVD---PSASNGRIKQ--LRSGALQIESSEETDQGKYECVATNSAGVRYSSP--ANLYVRVQNVAPRF 208 (304)
T ss_dssp CEEEEEE--TTEECC---GGGGTTSEEE--CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCC--EEEEEECCCEEEEE
T ss_pred CeEEEEE--CCEECc---CCCCcceEEe--CCCeEEEEccCCcccCEEEEEEEEeCCCCEEecc--EEEEEEeeccCCcE
Confidence 8999999 533322 1110001111 2234899999999999999999999988643221 12333333355666
Q ss_pred eccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 219 NRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 219 ~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
.. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++. .....|.|.++ .|+|.|+|.|.|..|..
T Consensus 209 ~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~ 281 (304)
T 2yd9_A 209 SI-LPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVAMSSLGVI 281 (304)
T ss_dssp EE-CCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEEEETTEEE
T ss_pred Ee-cCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--ccCEEEEEEEEeCCCcE
Confidence 43 3455678899999999999999999999999999886554321 23346777776 48999999999999999
Q ss_pred eeeEEEEEecCCCC
Q psy12426 299 KGTAKVTVLDIPSP 312 (616)
Q Consensus 299 ~~~~~l~v~~~p~~ 312 (616)
...+.|.|...+..
T Consensus 282 ~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 282 EAVAQITVKSLPKA 295 (304)
T ss_dssp EEEEEEC-------
T ss_pred EEEEEEEEecCccc
Confidence 88888888776543
No 29
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.94 E-value=3.9e-26 Score=228.15 Aligned_cols=289 Identities=12% Similarity=0.061 Sum_probs=172.8
Q ss_pred CCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeee----------------e-------ccceEEEeecCCCCCce---
Q psy12426 9 LGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLN----------------L-------RPIWEKCAQTEGDTPKG--- 62 (616)
Q Consensus 9 ~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~----------------~-------~G~Y~C~a~n~~~~~~~--- 62 (616)
+.++.|.+|++|.|.|.+.|.|.|.|.|++++..+. + +|.|+|.|.|..|....
T Consensus 55 ~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 134 (423)
T 3qs7_E 55 AAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFT 134 (423)
T ss_dssp -CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEE
T ss_pred cccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEE
Confidence 558999999999999999999999999999886432 1 99999999999765110
Q ss_pred ----------------------eEeeeccCCccc----eeeccccCCC------CCceEecC-cccCCeEEEEEEEEcCC
Q psy12426 63 ----------------------KVLDLIEGNHPI----WEKCAQTEGD------TPKGKVLD-LIEGNQYEFRVLAVNKG 109 (616)
Q Consensus 63 ----------------------~v~~~~~~~~p~----w~~~~~~~~~------~~~l~i~~-l~~~~~~~y~c~a~n~~ 109 (616)
..+.|...|.|. |++.+..... ........ +...|.|.|+|.|.|..
T Consensus 135 l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~ 214 (423)
T 3qs7_E 135 VSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNEL 214 (423)
T ss_dssp EEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSS
T ss_pred EEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCC
Confidence 112343346665 9987654211 01111111 25789999999999999
Q ss_pred CCCCCCCC-CCcceeecCCCcee----------e--eec-CcccccEEEEeeccCcccccccCCCceEeccc----CCCC
Q psy12426 110 GPGEPSDP-TAPHIARAKKGKCY----------H--LVG-TLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQT----EGDT 171 (616)
Q Consensus 110 g~~~~~~~-~~~~~~~~~~p~~~----------~--~~g-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 171 (616)
|....... ......+...|.+. . ..| .|.+.+.|++ ++..+. ........... ....
T Consensus 215 G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k--~g~~l~---~~~~~~~~~~~~~~~~~~~ 289 (423)
T 3qs7_E 215 GRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL--ENKALE---EGNYFEMSTYSTNRTMIRI 289 (423)
T ss_dssp CEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEE--SSSBCC---GGGEEEEEEEETTTEEEEE
T ss_pred CCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEE--CCEEcc---ccceeecccccCCceeEEE
Confidence 86543200 00000000111111 1 226 5668999999 543322 11001000000 1112
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceec-cCCcceEEEcCCeEEEEEEEeeecCceeEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINR-DQLSDIKVRAGSNFEFDINVIGEPIPTKEW 250 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~-~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W 250 (616)
..|.|.++..+|.|.|+|.|.|. . .. ...+.+ ..+|.+.. .....+.+.+|+.+.|.|.+.+.|.+.+.|
T Consensus 290 ~~L~I~~v~~~D~G~Y~C~A~N~-~---~~--~~~L~V---~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W 360 (423)
T 3qs7_E 290 LFAFVSSVARNDTGYYTCSSSKH-P---SQ--SALVTI---VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTW 360 (423)
T ss_dssp EEEEESSCCTTTCEEEEEEETTE-E---EE--EEEEEE---ESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEE
T ss_pred EEEEEeecCHHHCEEEEEEEecC-C---Cc--eEEEEE---EeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEE
Confidence 36999999999999999999887 1 11 111222 23454432 222456678999999999999999999999
Q ss_pred EECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCC
Q psy12426 251 LCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEG 315 (616)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~ 315 (616)
++++..+....+.. .....+.+......|.|.|+|.|.|..|....++.|.+..+|.+|..
T Consensus 361 ~k~g~~l~~~~~~~----~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~~ 421 (423)
T 3qs7_E 361 TFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHHH 421 (423)
T ss_dssp EETTEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC----------
T ss_pred EECCEECCCccccc----cCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCccccc
Confidence 99999886442100 01112223456668999999999999999999999999998887764
No 30
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.94 E-value=4.3e-26 Score=233.97 Aligned_cols=285 Identities=13% Similarity=0.088 Sum_probs=182.3
Q ss_pred CCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeee----------------e-------ccceEEEeecCCCCCc----
Q psy12426 9 LGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLN----------------L-------RPIWEKCAQTEGDTPK---- 61 (616)
Q Consensus 9 ~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~----------------~-------~G~Y~C~a~n~~~~~~---- 61 (616)
+..+.|.+|++++|.|.+.+.|...+.|++++..+. + +|.|+|.|.|..+...
T Consensus 55 ~~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~ 134 (527)
T 3qs9_E 55 AAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFT 134 (527)
T ss_dssp -CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEE
T ss_pred eeeEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEE
Confidence 338999999999999999999999999999887532 1 9999999999865410
Q ss_pred ------------e---------eEeeeccCCccc----eeeccccCC-----CCC--ceEecCcccCCeEEEEEEEEcCC
Q psy12426 62 ------------G---------KVLDLIEGNHPI----WEKCAQTEG-----DTP--KGKVLDLIEGNQYEFRVLAVNKG 109 (616)
Q Consensus 62 ------------~---------~v~~~~~~~~p~----w~~~~~~~~-----~~~--~l~i~~l~~~~~~~y~c~a~n~~ 109 (616)
. ..+.|...|.|. |++.+.... ... ......+.+.|.|.|+|.|.|..
T Consensus 135 v~v~~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~ 214 (527)
T 3qs9_E 135 VSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNEL 214 (527)
T ss_dssp EEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSS
T ss_pred EEECCceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEEEEEEeCC
Confidence 0 112344446665 988765421 111 12233466889999999999999
Q ss_pred CCCCCCCC-CCcceeecCCCcee----------e--ee-cCcccccEEEEeeccCcccccccCCCceEeccc----CCCC
Q psy12426 110 GPGEPSDP-TAPHIARAKKGKCY----------H--LV-GTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQT----EGDT 171 (616)
Q Consensus 110 g~~~~~~~-~~~~~~~~~~p~~~----------~--~~-g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 171 (616)
|....... ..+...+...|.+. . .. |.|.+.++|++ ++..+. ........... ....
T Consensus 215 G~~~~~~~~l~V~~~p~~~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k--~g~~l~---~~~~~~~~~~~~~~~~~~~ 289 (527)
T 3qs9_E 215 GRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL--ENKALE---EGNYFEMSTYSTNRTMIRI 289 (527)
T ss_dssp CEEEEECEEEESSSCCCCSCCEEEECTTSCEEEEEEEEESSSCCCEEEEC--SSSCCC---GGGEEEEEEEETTTEEEEE
T ss_pred CcccceEEEEEEeccCccCCCceEEeCCCeEEEEEEEccCCCCeEEEEEE--CCEECC---CCceeeeeeeccCcceeeE
Confidence 87543210 00000000122211 1 22 78889999999 533322 11111110000 1122
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceecc-CCcceEEEcCCeEEEEEEEeeecCceeEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRD-QLSDIKVRAGSNFEFDINVIGEPIPTKEW 250 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~-~~~~~~v~~g~~~~l~c~~~~~p~~~~~W 250 (616)
..|.|.+++.+|.|.|+|.|.|. . . ....+.+ ..+|.+... ....+.+.+|+.+.|.|.+.+.|.|.+.|
T Consensus 290 ~~L~I~~v~~~DsG~Y~C~a~N~--~-~---~~~~L~V---~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W 360 (527)
T 3qs9_E 290 LFAFVSSVARNDTGYYTCSSSKH--P-S---QSALVTI---VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTW 360 (527)
T ss_dssp EEEEESSCCGGGCEEEEEEETTE--E-E---EEEEEEE---C--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEE
T ss_pred EEEEEccCCcccCeEEEEEEEeC--C-C---ceEEEEE---EccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEE
Confidence 35999999999999999999887 1 1 1111222 234444322 22346678899999999999999999999
Q ss_pred EECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCC
Q psy12426 251 LCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPS 311 (616)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~ 311 (616)
++++..+....+.. .....|.|.++...|.|.|+|.|.|..|.....+.|.|..+|.
T Consensus 361 ~k~g~~l~~~~~~~----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~ 417 (527)
T 3qs9_E 361 TFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQ 417 (527)
T ss_dssp EETTEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCE
T ss_pred EECCEECcCCcccc----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCe
Confidence 99999886554422 1334899999999999999999999999888888888876664
No 31
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.93 E-value=5.3e-24 Score=205.52 Aligned_cols=268 Identities=15% Similarity=0.133 Sum_probs=195.9
Q ss_pred ceEEEcCCeEEEEEEEeeec-CceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEE
Q psy12426 225 DIKVRAGSNFEFDINVIGEP-IPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAK 303 (616)
Q Consensus 225 ~~~v~~g~~~~l~c~~~~~p-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~ 303 (616)
.+.+..|+++.|.|.+.+.+ .+.+.|++++..+........... ..|.|.++...|.|.|+|.+ .|.....+.
T Consensus 15 ~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~~---~g~~~~~~~ 88 (325)
T 1n26_A 15 VLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMG---RRLLLRSVQLHDSGNYSCYR---AGRPAGTVH 88 (325)
T ss_dssp EEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEEEEES---SEEEECSCCGGGCEEEEEES---SSSCSCEEE
T ss_pred cEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCcccccccccc---ceEEecccchhhCeEeEEEe---CCEEeeeEE
Confidence 34457999999999998765 679999998765421111111222 38999999999999999993 677778899
Q ss_pred EEEecCCCCCCCCccce-eecCCeEEEEEeCCCCCCCCceEEEEEEEEeCC---CCCE-EEcc---ccccceEEecccc-
Q psy12426 304 VTVLDIPSPPEGPLKPS-NITKSSCNLEWRAPRDDGGTDILHYVVEKMDME---TGRW-VPMG---DVSGTYTRAENLI- 374 (616)
Q Consensus 304 l~v~~~p~~p~~~~~~~-~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~---~~~~-~~~~---~~~~~~~~i~~L~- 374 (616)
|.|..+|..|. +.+. ......+.+.|.++.+. + ....|.+.++... ...| ..+. ......+.+..+.
T Consensus 89 L~V~~pP~~P~--l~c~~~~~~~~~~c~W~~~~~~-~-~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~ 164 (325)
T 1n26_A 89 LLVDVPPEEPQ--LSCFRKSPLSNVVCEWGPRSTP-S-LTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEG 164 (325)
T ss_dssp EEECCCCCCCC--CEEEBSSTTSCEEEEECCSSCC-C-TTCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEEECCCTT
T ss_pred EEeccCCCCCc--eeEEeecCCCcEEEEECCCCCC-C-CCceEEEEEEEccCCCCCcccccCCCCCCCCCEEEEECCCcc
Confidence 99998888775 4443 23356899999965543 3 3478888876532 1122 2332 2344567787765
Q ss_pred CCCeEEEEEEEEecCcCCCCccccCCEEc-cCCCCCCCCCCCCEEEEecC--CeEEEEecCCCC-CCCCcceeEEEEEee
Q psy12426 375 EGHDYNFRVKAVNKIGESLPLVCQSPITA-KDPFGRPDRPGQPTVTDWGK--DHVDLEWTPPKK-DGGSPISQYIIEKKP 450 (616)
Q Consensus 375 ~~~~y~~~v~a~n~~g~~~~~~~s~~~~~-~~~~~~p~~p~~~~~~~~~~--~~v~l~W~~p~~-~~~~~i~~Y~i~~~~ 450 (616)
+++.|.|+|.|.|..|.+.. ....+ ......|++|.++.+..... +++.|+|.+|.. +.+..+.+|+|+|+.
T Consensus 165 ~~~~Y~f~v~A~N~~G~~~s----~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~ 240 (325)
T 1n26_A 165 DSSFYIVSMCVASSVGSKFS----KTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRA 240 (325)
T ss_dssp CCCEEEEEEEEEETTEEEEC----CCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEE
T ss_pred cCcEEEEEEEEEcCCCCccc----CcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEe
Confidence 78999999999999998632 12221 22235688898998887653 689999998764 345568999999998
Q ss_pred CCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCc
Q psy12426 451 KYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRF 507 (616)
Q Consensus 451 ~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~ 507 (616)
.+. .|..... ......++|.+|.|++.|.|||+|.|..|.|.+|..+..+...+..
T Consensus 241 ~~~~~W~~~~~-~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~~~ 297 (325)
T 1n26_A 241 ERSKTFTTWMV-KDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPWT 297 (325)
T ss_dssp TTCSCCEEEEC-GGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECCCC
T ss_pred CCCCCCEEEcc-cCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceecCC
Confidence 876 7876543 3456789999999999999999999999999999999888776543
No 32
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.93 E-value=5.8e-23 Score=202.94 Aligned_cols=326 Identities=17% Similarity=0.169 Sum_probs=222.0
Q ss_pred CcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCC
Q psy12426 136 TLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVS 215 (616)
Q Consensus 136 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~ 215 (616)
.++..|.+++...++ .....|.. ........+.|.+|.++..|.|++.|.|..|.+.... ........+
T Consensus 29 ~~i~~Y~v~~~~~~~-----~~~~~~~~--~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~----~~~~~~~~~ 97 (368)
T 1fnf_A 29 PDITGYRITTTPTNG-----QQGNSLEE--VVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPIS----DTIIPAVPP 97 (368)
T ss_dssp SSCCEEEEEEEETTT-----CSSCCEEE--EECTTCCEEECCCCCTTSCEEEEEEEEETTEECCCEE----EEECCCCCC
T ss_pred CCceEEEEEEEECCC-----CCCceeEE--EecCCcCEEEECCCCCCCEEEEEEEEEcCCCccCcee----eeecCCCcC
Confidence 457789998821100 00112332 2445677999999999999999999999988755321 222221112
Q ss_pred CceeccCCcceEEEc--CCeEEEEEEEeee-cCc--eeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEE
Q psy12426 216 PYINRDQLSDIKVRA--GSNFEFDINVIGE-PIP--TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLA 290 (616)
Q Consensus 216 P~~~~~~~~~~~v~~--g~~~~l~c~~~~~-p~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~ 290 (616)
+.++.+.. ...+.|.+..... +.. .+.|...+. ......+........+.|.+|.+...|.|++.
T Consensus 98 -------p~~l~~~~~~~~si~l~W~~p~~~~~~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 167 (368)
T 1fnf_A 98 -------PTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKN---EEDVAELSISPSDNAVVLTNLLPGTEYVVSVS 167 (368)
T ss_dssp -------CEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEETTC---TTCCEEEEECTTCCEEEECSCCTTCEEEEEEE
T ss_pred -------CceeEEEEcCCCeEEEEeeCCCCCCCcEEEEEEEECCC---CCccEEEEcCCCcceEEecCCCCCCEEEEEEE
Confidence 23333332 3345555544311 111 333433221 11222333344566899999999999999999
Q ss_pred EEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCC-CEEE-ccccccceE
Q psy12426 291 VKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETG-RWVP-MGDVSGTYT 368 (616)
Q Consensus 291 a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~-~~~~-~~~~~~~~~ 368 (616)
|.|..|.+.. ........|.+|.+ +.+.......+.|+|.++. ..+.+|.|+++..... .+.. ........+
T Consensus 168 a~~~~g~s~~-~~~~~~~~~~~P~~-l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (368)
T 1fnf_A 168 SVYEQHESTP-LRGRQKTGLDSPTG-IDFSDITANSFTVHWIAPR----ATITGYRIRHHPEHFSGRPREDRVPHSRNSI 241 (368)
T ss_dssp EEETTEECCC-EEEEEECCCCCCEE-EEEESCCSSEEEEEEECCS----SCCSEEEEEEECSCCSSCCEEEEEETTCCEE
T ss_pred EEeCCCCCCC-eEeeecCCCCCCCc-cEEEEccCCEEEEEEeCCC----CCcCEEEEEEecCCCCCCccEEEeCCCcCEE
Confidence 9998875543 33344455666655 6666778899999999763 3688999999865432 2222 223456789
Q ss_pred EeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEE
Q psy12426 369 RAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEK 448 (616)
Q Consensus 369 ~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~ 448 (616)
.+.+|.+++.|.|+|.|.|..|.+..+. ... ..+|.+|.++.+...+.+++.|+|.+|.. .+.+|.|+|
T Consensus 242 ~i~~L~p~t~Y~~~V~A~n~~g~~~~~~----~~~---~t~p~~P~~l~~~~~~~~sv~l~W~~p~~----~i~~Y~v~~ 310 (368)
T 1fnf_A 242 TLTNLTPGTEYVVSIVALNGREESPLLI----GQQ---STVSDVPRDLEVVAATPTSLLISWDAPAV----TVRYYRITY 310 (368)
T ss_dssp EEESCCTTCEEEEEEEEEETTEECCCEE----EEE---ECCCCSCEEEEEEEEETTEEEEEEECCSS----CCSEEEEEE
T ss_pred EECCCCCCCEEEEEEEEEeCCccCCccc----ccc---cCCCCCCCeeEEEecCCCEEEEEeeCCCC----ccceEEEEE
Confidence 9999999999999999999999876532 122 25678888999988999999999998654 488999999
Q ss_pred eeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCC
Q psy12426 449 KPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASA 499 (616)
Q Consensus 449 ~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~ 499 (616)
+..++ .......+.+....+++.+|.|++.|.|+|+|.|..|.|+++....
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~~~~ 362 (368)
T 1fnf_A 311 GETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSKPI 362 (368)
T ss_dssp EETTCCSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCCBCCCE
T ss_pred EECCCCCccEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcccCcee
Confidence 98765 3333345567788999999999999999999999999999886443
No 33
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.93 E-value=7e-24 Score=209.56 Aligned_cols=262 Identities=19% Similarity=0.288 Sum_probs=199.3
Q ss_pred EecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEE
Q psy12426 266 VNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHY 345 (616)
Q Consensus 266 ~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y 345 (616)
........+.|.+|.+...|.|++.|.|..|.+.... ..+...+.+|.+ +.+.......+.|+|.++.. ..+.+|
T Consensus 52 ~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~-~~~~~~~~~p~~-l~~~~~~~~si~l~W~~p~~---~~~~~Y 126 (368)
T 1fnf_A 52 VVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPIS-DTIIPAVPPPTD-LRFTNIGPDTMRVTWAPPPS---IDLTNF 126 (368)
T ss_dssp EECTTCCEEECCCCCTTSCEEEEEEEEETTEECCCEE-EEECCCCCCCEE-EEEESCCSSCEEEEEECCTT---CCCSEE
T ss_pred EecCCcCEEEECCCCCCCEEEEEEEEEcCCCccCcee-eeecCCCcCCce-eEEEEcCCCeEEEEeeCCCC---CCCcEE
Confidence 3445567899999999999999999999887654332 233333334544 66666788999999998732 468899
Q ss_pred EEEEEeCCCC-CEEEcc-ccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecC
Q psy12426 346 VVEKMDMETG-RWVPMG-DVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGK 423 (616)
Q Consensus 346 ~v~~~~~~~~-~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~ 423 (616)
.|+++..... .|.... ......+.+.+|.+++.|.|+|.|.|..|.+.+. ..... ..|.+|.++.+...+.
T Consensus 127 ~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~----~~~~~---~~~~~P~~l~~~~~~~ 199 (368)
T 1fnf_A 127 LVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL----RGRQK---TGLDSPTGIDFSDITA 199 (368)
T ss_dssp EEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE----EEEEE---CCCCCCEEEEEESCCS
T ss_pred EEEEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCe----Eeeec---CCCCCCCccEEEEccC
Confidence 9999875443 444432 3456789999999999999999999999876542 11111 4566788888888899
Q ss_pred CeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEE
Q psy12426 424 DHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 424 ~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~ 502 (616)
+++.|+|.+|. +.+.+|.|+|+..+. .+............+++.+|.|++.|.|+|+|.|..|.|+++.. +
T Consensus 200 ~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~----~ 271 (368)
T 1fnf_A 200 NSFTVHWIAPR----ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIG----Q 271 (368)
T ss_dssp SEEEEEEECCS----SCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEE----E
T ss_pred CEEEEEEeCCC----CCcCEEEEEEecCCCCCCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCcccc----c
Confidence 99999999763 258999999988764 33333455667889999999999999999999999998875431 1
Q ss_pred eccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCCCC
Q psy12426 503 CKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQPIS 582 (616)
Q Consensus 503 ~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p~~ 582 (616)
..++|.+|.++.+...+.++|.|+|++|.
T Consensus 272 --------------------------------------------------~~t~p~~P~~l~~~~~~~~sv~l~W~~p~- 300 (368)
T 1fnf_A 272 --------------------------------------------------QSTVSDVPRDLEVVAATPTSLLISWDAPA- 300 (368)
T ss_dssp --------------------------------------------------EECCCCSCEEEEEEEEETTEEEEEEECCS-
T ss_pred --------------------------------------------------ccCCCCCCCeeEEEecCCCEEEEEeeCCC-
Confidence 12557888888888899999999999975
Q ss_pred CCCCceeeeEEEEeecCCC
Q psy12426 583 NGGSAIKGYEVERRERTSG 601 (616)
Q Consensus 583 ~~~~~i~~Y~i~~~~~~~~ 601 (616)
+.|.+|+|.|+..++.
T Consensus 301 ---~~i~~Y~v~~~~~~~~ 316 (368)
T 1fnf_A 301 ---VTVRYYRITYGETGGN 316 (368)
T ss_dssp ---SCCSEEEEEEEETTCC
T ss_pred ---CccceEEEEEEECCCC
Confidence 4589999999987654
No 34
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.93 E-value=3.4e-24 Score=205.97 Aligned_cols=277 Identities=25% Similarity=0.331 Sum_probs=207.8
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeeccc-CcEEEEe-cCCceEEEecCCCCCCcEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISK-DRFKIVN-DDKSTKLKVFDSKRGDSGIYTLAV 291 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~-~~~~~~l~i~~l~~~~~g~y~c~a 291 (616)
.+|.|. ..+.++.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+.. .+....|.|.++...|.|.|+|.|
T Consensus 3 ~~P~~~-~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 3 MAPHFK-EELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCCEEE-ECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCeee-ecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 456663 4456789999999999999999999999999999987643 3555443 455679999999999999999999
Q ss_pred EcCCCCceeeEEEEEecCCCCCCCC-----ccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-----CCEEEcc
Q psy12426 292 KNSWGTDKGTAKVTVLDIPSPPEGP-----LKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET-----GRWVPMG 361 (616)
Q Consensus 292 ~n~~g~~~~~~~l~v~~~p~~p~~~-----~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~-----~~~~~~~ 361 (616)
.|..|.....+.|.+..+|.....+ ..+....+..+.|.|...... .. .+.|...+. .......
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p----~p--~i~W~~~~~~~~~~~~~~~~~ 155 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKP----DP--VITWQKGQDLIDNNGHYQVIV 155 (305)
T ss_dssp EETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEES----CC--EEEEEESSSBCCSSSSCEEEE
T ss_pred EcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCC----CC--EEEEEECCEECCCCCcEEEEE
Confidence 9998888888888887655322110 123345577888888753221 11 233332211 1111111
Q ss_pred ccccceEEecc-ccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCc
Q psy12426 362 DVSGTYTRAEN-LIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSP 440 (616)
Q Consensus 362 ~~~~~~~~i~~-L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~ 440 (616)
......+.+.+ +...+.|.|+|.|.|..|.... +..+.+. ..|.+|.++.+.....+++.|+|.+|..+++.+
T Consensus 156 ~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~---~~~l~v~---~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~ 229 (305)
T 2nzi_A 156 TRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQK---TVELDVA---DVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSK 229 (305)
T ss_dssp CSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEE---EEEEEEE---BCCCCCEEEEEESCCSSCEEEEEECCSCCSBSC
T ss_pred cCCceEEEEecCCccCccEEEEEEEEeCCCceee---EEEEEEe---cCCCCCCCceeeeccCCEEEEEEcCCccCCCCc
Confidence 22346788888 9999999999999999997543 2334443 567888888888889999999999887778888
Q ss_pred ceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEecc
Q psy12426 441 ISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 441 i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
+..|.++++.... .|....... ...++|.+|.+++.|.|+|+|.|..|.|++|..+..+++.+
T Consensus 230 i~~y~v~~~~~~~~~w~~~~~~~--~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t~~ 293 (305)
T 2nzi_A 230 ITNYIVEKCATTAERWLRVGQAR--ETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKE 293 (305)
T ss_dssp EEEEEEEEEETTSCCEEEEEEES--SSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEECCC
T ss_pred eeEEEEEEecCCCCccEECcccc--CceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEcCC
Confidence 9999999998876 787765433 67899999999999999999999999999999988877654
No 35
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.93 E-value=1e-22 Score=201.62 Aligned_cols=323 Identities=18% Similarity=0.217 Sum_probs=219.6
Q ss_pred cccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCC
Q psy12426 137 LLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSP 216 (616)
Q Consensus 137 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P 216 (616)
.+.+|.+++...++ .....+. .........+.|.+|.++..|.|++.|.|..|.+... ........|
T Consensus 31 ~~~~Y~v~~~~~~~-----~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~------~~~~~~~~p 97 (375)
T 3t1w_A 31 DITGYRITTTPTNG-----QQGNSLE--EVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPI------SDTIIPEVP 97 (375)
T ss_dssp SCCEEEEEEEETTC-----TTSCCEE--EEEETTCCEEEECCCCTTCCEEEEEEEEETTEECCCE------EEEECCCCC
T ss_pred CeeeEEEEEEECCC-----CCCccee--EEcCCCccEEEEcCCcCCCEEEEEEEEEcCCCCCCcE------EeeEcCCCC
Confidence 56778888721200 0111222 2334567799999999999999999999988765532 221112222
Q ss_pred ceeccCCcceEEEc--CCeEEEEEEEeeecC---ceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEE
Q psy12426 217 YINRDQLSDIKVRA--GSNFEFDINVIGEPI---PTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAV 291 (616)
Q Consensus 217 ~~~~~~~~~~~v~~--g~~~~l~c~~~~~p~---~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a 291 (616)
. +.++.+.. ...+.|.+....... -.+.|...+.. ..............+.|.+|.+...|.|++.|
T Consensus 98 ~-----p~~l~~~~~~~~si~l~W~~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 169 (375)
T 3t1w_A 98 Q-----LTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEG---IPIFEDFVDSSVGYYTVTGLEPGIDYDISVIT 169 (375)
T ss_dssp C-----CSCCEEECCCSSEEEEECCCCCCTTEEEEEEEEEESSSC---CSCEEEEECTTCCEEEEECCCTTCEEEEEEEE
T ss_pred C-----CceEEEEecCCCeEEEEEECCCCCCceEEEEEEEECCCC---CceeEEEcCCCcceEEEeCCCCCCEEEEEEEE
Confidence 1 23333332 334555544321101 13444433321 11223334455668999999999999999999
Q ss_pred EcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-CCEEEcc-ccccceEE
Q psy12426 292 KNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET-GRWVPMG-DVSGTYTR 369 (616)
Q Consensus 292 ~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~-~~~~~~~-~~~~~~~~ 369 (616)
.|..|.+..+.. .....+.+|.+ +.+.......+.|+|.++. +..+.+|.|+++..+. ..|.... ......+.
T Consensus 170 ~~~~g~s~~s~~-~~~t~~~~p~~-l~~~~~~~~si~l~W~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 244 (375)
T 3t1w_A 170 LINGGESAPTTL-TQQTAVPPPTD-LRFTNIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVV 244 (375)
T ss_dssp EETTEECCCEEE-EEECCCCCCEE-EEEESCCSSCEEEEEECCS---SCCCCEEEEEEEEGGGTTCCEEEEECTTCCEEE
T ss_pred EeCCcccCCeee-eeecCCCCCce-eEEEecccCEEEEEEcCCC---CCCccEEEEEEEeCCCCCCcEEEEcCCCcCEEE
Confidence 998886655443 33334445554 6666778899999999763 3468999999987543 3343332 34457899
Q ss_pred eccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEe
Q psy12426 370 AENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKK 449 (616)
Q Consensus 370 i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~ 449 (616)
+.+|.+++.|.|+|.|.|..|.+.+. ..... ..|.+|.++.+..++.+++.|+|.+|. +.+.+|.|+|+
T Consensus 245 i~~L~p~t~Y~~~V~A~~~~g~s~~~----~~~~~---t~p~~P~~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~ 313 (375)
T 3t1w_A 245 LTNLLPGTEYVVSVSSVYEQHESTPL----RGRQK---TGLDSPTGIDFSDITANSFTVHWIAPR----ATITGYRIRHH 313 (375)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCCE----EEEEE---CCCCCCEEEEEESCCSSCEEEEEECCS----SCCSEEEEEEE
T ss_pred eCCCCCCCEEEEEEEEEcCCCcCCce----eeEEe---cCCCCCCccEeeeccCCEEEEEECCCC----cceeeEEEEEE
Confidence 99999999999999999998887653 12222 367788899998889999999999863 35899999999
Q ss_pred eCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCC
Q psy12426 450 PKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSK 496 (616)
Q Consensus 450 ~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~ 496 (616)
..+. ..............++|.+|.|++.|.|+|+|.|..|.|++..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s 361 (375)
T 3t1w_A 314 PEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI 361 (375)
T ss_dssp ETTCCSSCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred ECCCCCcceeEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCCCcee
Confidence 8775 3333445567788999999999999999999999999998653
No 36
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=209.90 Aligned_cols=266 Identities=12% Similarity=0.175 Sum_probs=189.6
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeee-cCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGE-PVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~-P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
||.+. + +.++.|.+|+.+.|.|.+.|. |.|.|+|+|+|..+.....|.-.
T Consensus 7 ~P~~~-~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--------------------------- 57 (317)
T 2y25_A 7 GPHFV-E-YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--------------------------- 57 (317)
T ss_dssp CCEEE-E-EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-------------------------------
T ss_pred CCcEe-e-eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE---------------------------
Confidence 56666 3 446899999999999999887 88999999999988754444221
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCccee------------ecCCCceeee--ec----------
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA------------RAKKGKCYHL--VG---------- 135 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~------------~~~~p~~~~~--~g---------- 135 (616)
.....|.|.++...|.|.|+|.|.|..|............. ....+..+.. .|
T Consensus 58 ---~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~ 134 (317)
T 2y25_A 58 ---DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYY 134 (317)
T ss_dssp ----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSC
T ss_pred ---CCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccC
Confidence 12358999999999999999999998886544311111100 0011111110 02
Q ss_pred CcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEec-----
Q psy12426 136 TLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIAR----- 210 (616)
Q Consensus 136 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~----- 210 (616)
.|.+.+.|++ ++..+. ....... ...+....|.|.++...|.|.|+|.|.|..|....+ ..+.+.
T Consensus 135 ~p~~~i~W~~--~~~~~~---~~~~~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~---~~l~v~~~~~~ 204 (317)
T 2y25_A 135 VEDLKVNWSH--NGSAIR---YSDRVKT--GVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKT---VDLSGQAYDEA 204 (317)
T ss_dssp CSSCEEEEEE--SSSBCC---CCSSEEE--EECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEE---EEECHHHHHHH
T ss_pred CCCcEEEEEE--CCEECC---CCCCeEE--eccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEE---EEEeeeecccc
Confidence 5788999999 533322 1121111 222344569999999999999999999987754322 111111
Q ss_pred ------------cccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEec-CCceEEEec
Q psy12426 211 ------------AKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVND-DKSTKLKVF 277 (616)
Q Consensus 211 ------------~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~ 277 (616)
.....|.+....+....+..|+.+.|.|.+.+.|.+.+.|++++..+..+.++.+... +....|.|.
T Consensus 205 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~ 284 (317)
T 2y25_A 205 YAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTIN 284 (317)
T ss_dssp HHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEB
T ss_pred chhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEEC
Confidence 1122455545556678899999999999999999999999999999987777777655 566799999
Q ss_pred CCCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy12426 278 DSKRGDSGIYTLAVKNSWGTDKGTAKVTVLD 308 (616)
Q Consensus 278 ~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~ 308 (616)
++...|.|.|+|.|.|..|.....+.|.|..
T Consensus 285 ~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 285 GVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp SCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 9999999999999999999988888888764
No 37
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.93 E-value=1.6e-23 Score=217.32 Aligned_cols=286 Identities=9% Similarity=0.022 Sum_probs=179.5
Q ss_pred CCCCceEecCCCeEEEEEEEeeecCCeeeeeeCC--e-----------------------------eeee-------ccc
Q psy12426 7 RHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGG--N-----------------------------PLNL-------RPI 48 (616)
Q Consensus 7 ~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~-----------------------------~l~~-------~G~ 48 (616)
..|.++.|.+|+.|.|.|.+.|.|.|.|.|+|++ + .|.+ +|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESD 84 (523)
T ss_pred ccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEE
Confidence 4588999999999999999999999999999974 1 1222 999
Q ss_pred eEEEeecCCCC-------------------Cc------------e--eEeeeccCCc-c---c--eeeccccCCC-----
Q psy12426 49 WEKCAQTEGDT-------------------PK------------G--KVLDLIEGNH-P---I--WEKCAQTEGD----- 84 (616)
Q Consensus 49 Y~C~a~n~~~~-------------------~~------------~--~v~~~~~~~~-p---~--w~~~~~~~~~----- 84 (616)
|+|.|.|..|. |. + ..+.|...|. | . |++++.....
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 164 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETT 164 (523)
T ss_pred EEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEec
Confidence 99999996431 10 0 1122322233 2 2 9998865321
Q ss_pred ------C------CceEecCcccCCeEEEEEEEEcCCCCCCCCCCC-------CcceeecCCCc-------eee----ee
Q psy12426 85 ------T------PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPT-------APHIARAKKGK-------CYH----LV 134 (616)
Q Consensus 85 ------~------~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~-------~~~~~~~~~p~-------~~~----~~ 134 (616)
. ..|.|.++...|.|.|+|.|.|..|........ ....+....|. .+. ..
T Consensus 165 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~ 244 (523)
T 2rcj_C 165 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVK 244 (523)
T ss_pred cccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEe
Confidence 1 248899999999999999999998865443111 00111111111 111 22
Q ss_pred cC-ccc-ccEEEEeeccCcccccccCCCceEecccCC---CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEe
Q psy12426 135 GT-LLK-DSIYEQLKRSGLFDQFHLCPIWEKCAQTEG---DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA 209 (616)
Q Consensus 135 g~-p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~ 209 (616)
|. |.+ .+.|++ ++..+. ...........+ ....|.|.++..+| |.|+|.|.|..|..... ..+
T Consensus 245 g~~P~p~~v~W~k--~g~~~~----~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~-----~~l 312 (523)
T 2rcj_C 245 DYFPQPVTVSWNS--GALTSG----VHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD-----KRV 312 (523)
T ss_pred ceeCCCeEEEEec--CCcccc----eEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceE-----Eec
Confidence 65 656 799998 532211 000000000001 12378999999999 99999999998874321 222
Q ss_pred ccccCCCceeccCCcce-EEEcCCeEEEEEEEeeecC----ceeEEEECCeeecccCcEEEE-ecCC----ceEEEecCC
Q psy12426 210 RAKKVSPYINRDQLSDI-KVRAGSNFEFDINVIGEPI----PTKEWLCNDITIISKDRFKIV-NDDK----STKLKVFDS 279 (616)
Q Consensus 210 ~~~~~~P~~~~~~~~~~-~v~~g~~~~l~c~~~~~p~----~~~~W~~~~~~~~~~~~~~~~-~~~~----~~~l~i~~l 279 (616)
... ..|.+....+... .+.+|+.+.|.|.+.|.+. +.+.|++++..+......... ..++ .+.|.|.++
T Consensus 313 ~v~-~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~ 391 (523)
T 2rcj_C 313 EPL-SLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQ 391 (523)
T ss_pred CCC-cCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHH
Confidence 111 2344333333333 3788999999999998653 599999999987644322211 1111 236889999
Q ss_pred CCCCcEEEEEEEEcCCCCceeeEEEE
Q psy12426 280 KRGDSGIYTLAVKNSWGTDKGTAKVT 305 (616)
Q Consensus 280 ~~~~~g~y~c~a~n~~g~~~~~~~l~ 305 (616)
...|.|.|+|.|.|..+.......+.
T Consensus 392 ~~~d~G~Y~C~a~n~~~~~~~~~~~~ 417 (523)
T 2rcj_C 392 NWLDGKEYKCKVSNKALPAPIEKTIS 417 (523)
T ss_pred HhcCCCeEEEEEeCCCCCCceeEEEE
Confidence 99999999999999877665444444
No 38
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.92 E-value=1.4e-23 Score=209.49 Aligned_cols=300 Identities=14% Similarity=-0.002 Sum_probs=213.0
Q ss_pred CCeEEEEEEEEe----CCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeee
Q psy12426 182 GNQYEFRVLAVN----KGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITI 257 (616)
Q Consensus 182 ~~~~~y~c~a~n----~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~ 257 (616)
...|.++++... ..|.+..|+++....+... .+..+ ...|.+..+..|++++|.|.+. .+.+.|++++..+
T Consensus 167 c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~-~~t~i-~v~P~~~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i 241 (488)
T 2q7n_A 167 CATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWI-RNTET-NVFPQDKVVLAGSNMTICCMSP---TKVLSGQIGNTLR 241 (488)
T ss_dssp SSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCC-CCSSC-CEECTTCEEESSCCCEEEECCS---SCEEEEEETTEEC
T ss_pred ccceEEEEEEEeccccccCCCCCcCCCChhhcCCc-CCCce-EECCCCCEEcCCCCEEEEEECC---CCEEEEEECCEEC
Confidence 557888888875 3456667777766655332 22222 3445677789999999999988 4689999999876
Q ss_pred cccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCC
Q psy12426 258 ISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDD 337 (616)
Q Consensus 258 ~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~ 337 (616)
... ...+....|+|.++...|.|.|.|.+.+ +.....+.+.+..+|.+|.+ +.+.......+.++|.++...
T Consensus 242 ~~~-----ri~~~~~~L~I~nl~~sd~g~y~~~C~~--~~~i~~~~l~v~~pP~~P~n-l~C~~~~~~svtcsW~pg~~~ 313 (488)
T 2q7n_A 242 PLI-----HLYGQTVAIHILNIPVSENSGTNIIFIT--DDDVYGTVVFAGYPPDVPQK-LSCETHDLKEIICSWNPGRIT 313 (488)
T ss_dssp CCE-----ECSSSCEEEECCSCCCCCSSCEEEEEEE--SSCEEEEEEEEECCCCCCCS-CEEEBSSSSEEEEEECCCSCC
T ss_pred chh-----hccceEEEEEEeCCCcccCCcEEEEEEc--CCeEEEEEEEeeCCCCCCcc-cEEEEcCCCEEEEEEeCCCcC
Confidence 533 1345667999999999988888877763 33344777888889999887 676666788999999986654
Q ss_pred --CCCceEEEEEEEEeCCC-CCEEEccc--cccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEcc-CCCCCCC
Q psy12426 338 --GGTDILHYVVEKMDMET-GRWVPMGD--VSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAK-DPFGRPD 411 (616)
Q Consensus 338 --~~~~i~~y~v~~~~~~~-~~~~~~~~--~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~-~~~~~p~ 411 (616)
++..+..|.++++..+. ..|..... .....+.+..+...+.|.|+|.|.|..|.+. + .+.+. ....+|+
T Consensus 314 ~l~G~~~t~Y~L~y~~~g~~~~c~~~~~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~-S----~~~~~~~~~v~P~ 388 (488)
T 2q7n_A 314 GLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQ-S----AVVINVTERVAPH 388 (488)
T ss_dssp CCCTTSSCEEEEEETTTCCEEEEECSSCCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEE-E----EEECCGGGTBCCC
T ss_pred CCCCCCceeEEEEEEECCCCCCCccccccCCceEEEEEcCCCCccEEEEEEEEEeCCCCcc-c----eEEEEecCCCCCC
Confidence 24568899999865432 23433322 2334566654444689999999999999843 2 22222 2235788
Q ss_pred CCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeE-eecCCccEE--EcCCCCCCCeEEEEEEEEc
Q psy12426 412 RPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKAC-IVPANITAT--SVPDLKEGEEYEFRVIAVN 487 (616)
Q Consensus 412 ~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~-~~~~~~~~~--~l~~L~p~t~Y~~~v~a~n 487 (616)
+|.++++...+.+++.|+|++|...++ .+..|+|+|+..++ .|.... ........+ +|.+|.|++.|.|+|+|.+
T Consensus 389 PP~nl~v~~~s~~sl~LsW~pP~~~~g-~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~ 467 (488)
T 2q7n_A 389 DPTSLKVKDINSTVVTFSWYLPGNFTK-INLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS 467 (488)
T ss_dssp CCEEEEEEECSTTCEEEEEEEEEECSS-SEEEEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE
T ss_pred CCeEEEEEecCCCEEEEEEeCCCCCCC-cceEEEEEEEECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE
Confidence 999999988889999999998765444 68999999998876 554322 222223455 9999999999999999999
Q ss_pred CCCCCCCCCCCCCE
Q psy12426 488 KGGPGEPSKASAPV 501 (616)
Q Consensus 488 ~~G~g~~s~~~~~~ 501 (616)
.|.|.+|..+...
T Consensus 468 -~g~G~WS~WS~~v 480 (488)
T 2q7n_A 468 -KTFWKWSRWSDEK 480 (488)
T ss_dssp -SSCSSCCCCCCCC
T ss_pred -CCCCCCCCCcCCE
Confidence 8886555554443
No 39
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.92 E-value=8.6e-24 Score=211.87 Aligned_cols=259 Identities=17% Similarity=0.264 Sum_probs=184.5
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee---ccceEEEeecCCCCCceeEeeeccCCccceee
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL---RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEK 77 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~---~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~ 77 (616)
||.+. ..+.+..+.+|+.+.|.|.+.|.|.|.|+|+|++..+.. ...+.
T Consensus 121 p~~~~-~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~--------------------------- 172 (403)
T 3laf_A 121 PLRFL-SQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVV--------------------------- 172 (403)
T ss_dssp CCEEC-SCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEE---------------------------
T ss_pred CCccc-cCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEE---------------------------
Confidence 34444 457889999999999999999999999999999987752 11110
Q ss_pred ccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcce---------eecCCCceee------------eecC
Q psy12426 78 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI---------ARAKKGKCYH------------LVGT 136 (616)
Q Consensus 78 ~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~---------~~~~~p~~~~------------~~g~ 136 (616)
......|.|.++...|.|.|+|.|.|..|............ .....|.... ..|.
T Consensus 173 ----~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 248 (403)
T 3laf_A 173 ----VLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGY 248 (403)
T ss_dssp ----ECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEE
T ss_pred ----EcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCC
Confidence 11245899999999999999999999877543221000000 0011111111 2277
Q ss_pred cccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCC
Q psy12426 137 LLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSP 216 (616)
Q Consensus 137 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P 216 (616)
|.+.+.|++ ++..+. ........ .....|.|.++..+|.|.|+|.|.|..|....+ ..+.+ ..+|
T Consensus 249 p~~~~~W~~--~~~~~~--~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~---~~l~V---~~~p 313 (403)
T 3laf_A 249 PPPSFTWLR--GEEVIQ--LRSKKYSL-----LGGSNLLISNVTDDDSGTYTCVVTYKNENISAS---AELTV---LVPP 313 (403)
T ss_dssp SCCEEEEEE--TTEECC--CSSSSEEE-----ETTTEEEECSCCGGGCEEEEEEEEETTEEEEEE---EEEEE---EEEE
T ss_pred CCCeEEEEE--CCeecc--CCCceEEE-----CCccEEEEeCCCHHHCEEEEEEEEcCCCceEEE---EEEEE---ECCC
Confidence 888999998 532221 11111111 123479999999999999999999988763321 11222 2345
Q ss_pred ceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 217 YINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 217 ~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
.+ ...+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+ .|.|.++...|.|.|+|.|.|..|
T Consensus 314 ~~-~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~N~~G 389 (403)
T 3laf_A 314 WF-LNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGS---NLRILGVVKSDEGFYQCVAENEAG 389 (403)
T ss_dssp EE-EECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTT---EEEESSCCGGGCEEEEEEEEETTE
T ss_pred cE-eecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCc---cEEEeccccccCEEEEEEEEcCCc
Confidence 55 34456677889999999999999999999999999998777776665443 899999999999999999999999
Q ss_pred CceeeEEEEEecCC
Q psy12426 297 TDKGTAKVTVLDIP 310 (616)
Q Consensus 297 ~~~~~~~l~v~~~p 310 (616)
....++.|.|..+|
T Consensus 390 ~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 390 NAQSSAQLIVPKPA 403 (403)
T ss_dssp EEEEEEEEECCCC-
T ss_pred eEEEEEEEEEeCCC
Confidence 99999988887654
No 40
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.92 E-value=1e-23 Score=201.12 Aligned_cols=265 Identities=12% Similarity=0.163 Sum_probs=178.5
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeec-CCeeeeee-CCeeeee-ccceEEEeecCCCCCceeEeeeccCCccceee
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEP-VPHVDWRA-GGNPLNL-RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEK 77 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P-~p~v~W~~-~~~~l~~-~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~ 77 (616)
||.+... |.+..|.+|+.+.|.|.+.|.| .|.|+|+| +|..+.. .+.+.-...
T Consensus 2 ~~~v~~~-p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~----------------------- 57 (291)
T 1qz1_A 2 VLQVDIV-PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWN----------------------- 57 (291)
T ss_dssp CCCEEEE-SSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEE-----------------------
T ss_pred CcceEec-CCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEc-----------------------
Confidence 5666644 8899999999999999999987 68999999 7777653 233322210
Q ss_pred ccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcce----eecCCCcee--------e----eecCccccc
Q psy12426 78 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI----ARAKKGKCY--------H----LVGTLLKDS 141 (616)
Q Consensus 78 ~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~----~~~~~p~~~--------~----~~g~p~~~~ 141 (616)
......|.|.++...|.|.|+|.|.|..|..... ...+.. .....|... . ..|.|.+.+
T Consensus 58 ----~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~-~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v 132 (291)
T 1qz1_A 58 ----DDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEA-TVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTI 132 (291)
T ss_dssp ----ETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEE-EEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEE
T ss_pred ----CCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEE-EEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEE
Confidence 1124689999999999999999999988642211 000000 000111111 1 227788899
Q ss_pred EEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceecc
Q psy12426 142 IYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRD 221 (616)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~ 221 (616)
.|++ ++..+.. ....... ......|.|.++...|.|.|+|.|.|..+....+ ....+.+ ..+|.+...
T Consensus 133 ~W~~--~~~~~~~-~~~~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~-~~~~l~v---~~~p~~~~~ 200 (291)
T 1qz1_A 133 IWKH--KGRDVIL-KKDVRFI-----VLSNNYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQVIV---NVPPTVQAR 200 (291)
T ss_dssp EEEE--TTSCSST-TCCTTEE-----ECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEE-EEEEEEE---EEEEEEEES
T ss_pred EEEE--CCEEccc-CCCceEE-----EccCCcEEEccCccccCeEEEEEEEecCCCceee-EEEEEEE---ecCCccccc
Confidence 9998 5332210 0111111 1223479999999999999999999876432111 0111221 134544322
Q ss_pred -CCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccC----cEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 222 -QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD----RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 222 -~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~----~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
.+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++.. ......|.|.++...|.|.|+|.|.|..|
T Consensus 201 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 278 (291)
T 1qz1_A 201 QSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIF--SDDSSELTIRNVDKNDEAEYVCIAENKAG 278 (291)
T ss_dssp CSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEE--CTTSCEEEECSCCGGGCEEEEEEEEETTE
T ss_pred ccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEE--cCCCcEEEEEecChhcCEEEEEEEEeCCC
Confidence 2235567789999999999999999999999999876553 3333 33345899999999999999999999999
Q ss_pred CceeeEEEEEec
Q psy12426 297 TDKGTAKVTVLD 308 (616)
Q Consensus 297 ~~~~~~~l~v~~ 308 (616)
.....+.|.|..
T Consensus 279 ~~~~~~~l~V~~ 290 (291)
T 1qz1_A 279 EQDASIHLKVFA 290 (291)
T ss_dssp EEEEEEEEEEEC
T ss_pred ceEEEEEEEEEc
Confidence 988888888764
No 41
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.91 E-value=3.2e-23 Score=197.21 Aligned_cols=226 Identities=18% Similarity=0.316 Sum_probs=175.2
Q ss_pred CCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCC-CCCEEEcc-ccccceEEeccccCCCeEEEEEEEE
Q psy12426 309 IPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDME-TGRWVPMG-DVSGTYTRAENLIEGHDYNFRVKAV 386 (616)
Q Consensus 309 ~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~-~~~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~ 386 (616)
+|.+|.+ +.+.....+++.|+|.++. ..+.+|.|+++... ...|.... ......+.+.+|.+++.|.|+|.|.
T Consensus 20 ~p~~P~~-l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 94 (290)
T 3r8q_A 20 AIPAPTD-LKFTQVTPTSLSAQWTPPN----VQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYAL 94 (290)
T ss_dssp CCCCCEE-EEEEEECSSCEEEEEECCS----SCCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEEE
T ss_pred CCCCCCc-eEEEECCCCEEEEEEeCCC----CCeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEEE
Confidence 4555555 7777889999999999762 36899999998754 34454443 2456789999999999999999999
Q ss_pred ecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCcc
Q psy12426 387 NKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANIT 466 (616)
Q Consensus 387 n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~ 466 (616)
|..|.+.++. ..+.+. ..|.+|.++.+...+.+++.|+|.+|. +.+.+|.|+|+..++.............
T Consensus 95 ~~~g~s~~s~----~~~~t~-~~~~~P~~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~ 165 (290)
T 3r8q_A 95 KDTLTSRPAQ----GVVTTL-ENVSPPRRARVTDATETTITISWRTKT----ETITGFQVDAVPANGQTPIQRTIKPDVR 165 (290)
T ss_dssp ETTEECCCEE----EEEECC-CCCCCCEEEEEEEECSSCEEEEEECCS----CCCCEEEEEEEESSSCCCEEEEECTTCS
T ss_pred eCCCCCCCcc----eeEecC-CCCCCCceeEEEEcCCCeEEEEEeCCC----CcccEEEEEEEECCCCcceEEecCCCcc
Confidence 9999877642 223332 345788899999999999999999762 2589999999887763223344556788
Q ss_pred EEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccc
Q psy12426 467 ATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKS 546 (616)
Q Consensus 467 ~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 546 (616)
.++|.+|.|++.|.|+|+|.|..|.|++.. ...
T Consensus 166 ~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~----~~~------------------------------------------- 198 (290)
T 3r8q_A 166 SYTITGLQPGTDYKIYLYTLNDNARSSPVV----IDA------------------------------------------- 198 (290)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEE----EEE-------------------------------------------
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcccCCEE----EEe-------------------------------------------
Confidence 999999999999999999999999876421 111
Q ss_pred eeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCCCeEEc
Q psy12426 547 MVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRERTSGRWIKI 606 (616)
Q Consensus 547 ~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~w~~~ 606 (616)
.+.|.+|.++.+...+.+++.|+|.+|. +.+.+|+|.|+..++..|...
T Consensus 199 -------~t~p~~P~~l~~~~~~~~sv~l~W~~p~----~~~~~Y~v~~~~~~~~~~~~~ 247 (290)
T 3r8q_A 199 -------STAIDAPSNLRFLATTPNSLLVSWQPPR----ARITGYIIKYEKPGSPPREVV 247 (290)
T ss_dssp -------ECCCCCCEEEEEEEEETTEEEEEEECCS----SCCCEEEEEEECTTSCCEECS
T ss_pred -------cCCCCCCCccEEEeeCCCEEEEEEeCCC----CcccEEEEEEEeCCCCcceeE
Confidence 1447788888888899999999999974 689999999998887777643
No 42
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.91 E-value=8.3e-24 Score=201.77 Aligned_cols=264 Identities=16% Similarity=0.178 Sum_probs=178.9
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeee-CCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRA-GGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~-~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
+|.+... +.++.+.+|+.|.|.|.+.|.|. .|.|+| +|..+...++|.-..
T Consensus 4 ~p~v~~~-~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~-------------------------- 55 (291)
T 2wim_A 4 LLQVTIS-LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQK-------------------------- 55 (291)
T ss_dssp CCEEEES-CSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEE--------------------------
T ss_pred CceEEEe-ccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEec--------------------------
Confidence 4667644 88999999999999999999885 899999 677666445543321
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeec-----CCCc--------eee----eecCcccccE
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA-----KKGK--------CYH----LVGTLLKDSI 142 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~-----~~p~--------~~~----~~g~p~~~~~ 142 (616)
......|.|.++...|.|.|+|.|.|..|...... ... .+.. ..+. .+. ..|.|.+.+.
T Consensus 56 --~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~-~~l-~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~ 131 (291)
T 2wim_A 56 --EGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEAT-VVL-EIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVS 131 (291)
T ss_dssp --ETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEE-EEE-EEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEE
T ss_pred --CCCEEEEEEccCCcccCEEEEEEEecccCceEEEE-EEE-EecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEE
Confidence 11235899999999999999999999887643210 000 0000 0111 111 2277888899
Q ss_pred EEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccC
Q psy12426 143 YEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQ 222 (616)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~ 222 (616)
|++ ++..+.. ........ .....|.|.++...|.|.|+|.|.|..+...... .+.+. ...+|.+....
T Consensus 132 W~~--~~~~~~~-~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~---~~~~~-v~~~p~~~~~~ 199 (291)
T 2wim_A 132 WLY--HNEEVTT-ISDNRFAM-----LANNNLQILNINKSDEGIYRCEGRVEARGEIDFR---DIIVI-VNVPPAISMPQ 199 (291)
T ss_dssp EEC--C----CB-CCCSSEEE-----CTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEE---EEEEE-EEBCCCCBCSC
T ss_pred EEE--CCccccc-cCCceEEE-----ccCCCEEEEecchhhCEEEEEEEEECCCCeeEEe---eEEEE-eccCCccccCc
Confidence 998 5332210 01111111 1234799999999999999999999875422110 11111 12345543221
Q ss_pred C-cceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceee
Q psy12426 223 L-SDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 301 (616)
Q Consensus 223 ~-~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~ 301 (616)
. ....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+.. ....|.|.++...|.|.|+|.|.|..|....+
T Consensus 200 ~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 277 (291)
T 2wim_A 200 KSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQ 277 (291)
T ss_dssp SEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECS--TTCEEEEESCCSTTCEEEEEEEEETTEEEEEE
T ss_pred ccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcC--CccEEEEeeCCcccCEEEEEEEEECCCceeee
Confidence 1 13456789999999999999999999999999987777665543 34589999999999999999999999999999
Q ss_pred EEEEEecCC
Q psy12426 302 AKVTVLDIP 310 (616)
Q Consensus 302 ~~l~v~~~p 310 (616)
+.+.+..++
T Consensus 278 ~~l~v~~~~ 286 (291)
T 2wim_A 278 AFLQVFVQH 286 (291)
T ss_dssp EEEEC----
T ss_pred EEEEEEEec
Confidence 999887654
No 43
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.91 E-value=5e-23 Score=195.30 Aligned_cols=223 Identities=18% Similarity=0.278 Sum_probs=170.0
Q ss_pred EEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCC-CCCEEEc-cccccceEEeccccCCCeEEE
Q psy12426 304 VTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDME-TGRWVPM-GDVSGTYTRAENLIEGHDYNF 381 (616)
Q Consensus 304 l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~-~~~~~~~-~~~~~~~~~i~~L~~~~~y~~ 381 (616)
+....+|.+|.+ +.+......++.|+|.++. ..+.+|.|+++... ...|... .......+.+.+|.+++.|.|
T Consensus 9 ~~~~~~p~~P~~-l~~~~~~~~sv~l~W~~~~----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 83 (283)
T 1tdq_A 9 GGGIPVIDGPTQ-ILVRDVSDTVAFVEWTPPR----AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEV 83 (283)
T ss_dssp ---CCSSCCCEE-EEEEEECSSCEEEEEECCS----SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEE
T ss_pred cccccCCCCCcE-EEEEecCCCeEEEEEECCC----CceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEE
Confidence 344557777776 7788889999999999765 36889999996532 2333222 235567899999999999999
Q ss_pred EEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEe
Q psy12426 382 RVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACI 460 (616)
Q Consensus 382 ~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~ 460 (616)
+|.|.|..|.+... ...+. .+|.+|.++.+...+.+++.|+|.+|. +.+.+|.|+|+..++ .+.. ..
T Consensus 84 ~V~a~~~~g~s~~~----~~~~~---t~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~-~~ 151 (283)
T 1tdq_A 84 SISAVRGTNESDAS----STQFT---TEIDAPKNLRVGSRTATSLDLEWDNSE----AEAQEYKVVYSTLAGEQYHE-VL 151 (283)
T ss_dssp EEEEEETTEECCCE----EEEEE---CCCCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEETTCCCCEE-EE
T ss_pred EEEEECCCCCCCCe----eEEEE---CCCCCCCceEEEecCCCeEEEEecCCC----CCccEEEEEEEeCCCCcceE-EE
Confidence 99999988876432 22332 467888899999999999999999865 258999999998776 4433 33
Q ss_pred ecCC---ccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCee
Q psy12426 461 VPAN---ITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFV 537 (616)
Q Consensus 461 ~~~~---~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~ 537 (616)
+... ...++|.+|.|++.|.|+|+|.|..|.|++.. ...
T Consensus 152 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~----~~~---------------------------------- 193 (283)
T 1tdq_A 152 VPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPAT----MNA---------------------------------- 193 (283)
T ss_dssp EECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEE----EEE----------------------------------
T ss_pred CCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcceE----EEe----------------------------------
Confidence 4444 78999999999999999999999988775332 111
Q ss_pred eeccccccceeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCC
Q psy12426 538 LDLNEGLKSMVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRERTSG 601 (616)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~ 601 (616)
.+.+.+|.++.+...+.+++.|+|++| ++.|.+|+|.|+..++.
T Consensus 194 ----------------~t~~~~P~~l~~~~~~~~sv~l~W~~p----~~~i~~Y~v~~~~~~~~ 237 (283)
T 1tdq_A 194 ----------------RTELDSPRDLMVTASSETSISLIWTKA----SGPIDHYRITFTPSSGI 237 (283)
T ss_dssp ----------------ECCCCCCEEEEEEEECSSCEEEEEECC----CSCCSEEEEEEECSSSC
T ss_pred ----------------cCCCCCCCccEEeEecCCEEEEEEeCC----CCcccEEEEEEEcCCCC
Confidence 134567788888888999999999987 48899999999976653
No 44
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.91 E-value=2.2e-22 Score=211.94 Aligned_cols=298 Identities=10% Similarity=0.043 Sum_probs=186.7
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeee-cCCeeeeeeCCee---------------------------------eee-
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGE-PVPHVDWRAGGNP---------------------------------LNL- 45 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~-P~p~v~W~~~~~~---------------------------------l~~- 45 (616)
+|.+. ..+.++.+.+|+.+.|.|.+.|. |.+.|.|+|++.. |.+
T Consensus 112 ~p~~~-~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 190 (585)
T 2ocw_A 112 GPGLL-NDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVIN 190 (585)
T ss_pred Ccccc-CCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEc
Confidence 46665 45889999999999999998865 5578999998742 222
Q ss_pred ------ccceEEEeecCCCC-------------Cc------e--eEeeeccCC-c---cc--ee-ecccc----------
Q psy12426 46 ------RPIWEKCAQTEGDT-------------PK------G--KVLDLIEGN-H---PI--WE-KCAQT---------- 81 (616)
Q Consensus 46 ------~G~Y~C~a~n~~~~-------------~~------~--~v~~~~~~~-~---p~--w~-~~~~~---------- 81 (616)
+|.|+|.|.|..+. |. + ..+.|..++ . +. |. +++..
T Consensus 191 ~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~ 270 (585)
T 2ocw_A 191 QLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGK 270 (585)
T ss_pred cCChhHCeEEEEEeccCCccccceEEEEEccCCCceeEEcCCCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCc
Confidence 89999999998664 11 1 122332222 2 22 64 55521
Q ss_pred -----C--------CCCC--ceEecCcccCCeEEEEEEEEcCCCCCCCCCC---CCcce----eecCCCceee-------
Q psy12426 82 -----E--------GDTP--KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP---TAPHI----ARAKKGKCYH------- 132 (616)
Q Consensus 82 -----~--------~~~~--~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~---~~~~~----~~~~~p~~~~------- 132 (616)
. ...+ .|.|.++...|.|.|.|.|.|. |....... ..+.. .....|..+.
T Consensus 271 ~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v 349 (585)
T 2ocw_A 271 RAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSV 349 (585)
T ss_pred CCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEecccccccCCcceEEEeCCcE
Confidence 0 0022 6999999999999999999995 43331100 00000 0011122221
Q ss_pred -----eecCccccc----EEEEeec-cCccccccc---------CCCceEecccCCCCCeEEeecccCCCeEEEEEEEEe
Q psy12426 133 -----LVGTLLKDS----IYEQLKR-SGLFDQFHL---------CPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVN 193 (616)
Q Consensus 133 -----~~g~p~~~~----~~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n 193 (616)
..|.|.+.+ +|++ . +|....... .++.............|.|.++..+|.|.|+|.| |
T Consensus 350 ~l~C~~~~~p~p~i~~w~~W~~--~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n 426 (585)
T 2ocw_A 350 AVLCPYNRKESKSIKYWCLWEG--AQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-N 426 (585)
T ss_pred EEEEecCCCCCccEEEEEEEEc--cCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-c
Confidence 126777765 4554 2 332100000 1111111111122234999999999999999999 7
Q ss_pred CCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEe----eecCceeEEEECCeeecccCc-------
Q psy12426 194 KGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVI----GEPIPTKEWLCNDITIISKDR------- 262 (616)
Q Consensus 194 ~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~----~~p~~~~~W~~~~~~~~~~~~------- 262 (616)
..|..... +.+.....+|.+.. +....+..|+.+.|.|.+. +.|.+.+.|++++..+.....
T Consensus 427 ~~g~~~~~-----~~l~V~~~~p~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~ 499 (585)
T 2ocw_A 427 GDTLWRTT-----VEIKIIEGEPNLKV--PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAF 499 (585)
T ss_pred CCCcccee-----EEEEEecCcccccc--CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcce
Confidence 77654321 33322233455432 5678899999999999997 678889999999987653321
Q ss_pred EEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCcee-eEEEEEecCC
Q psy12426 263 FKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG-TAKVTVLDIP 310 (616)
Q Consensus 263 ~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~-~~~l~v~~~p 310 (616)
..+...+....|.|.++...|.|.|+|.|.|..|.... .+.|.|..+|
T Consensus 500 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 500 VNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred EEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 12222344569999999999999999999999987654 4788888776
No 45
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.90 E-value=2e-24 Score=210.42 Aligned_cols=263 Identities=13% Similarity=0.109 Sum_probs=119.4
Q ss_pred CCCceEecCCCeEEEEEEEeee-cCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccccCCCCC
Q psy12426 8 HLGDIKLSAGTTLKFDANIIGE-PVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTEGDTP 86 (616)
Q Consensus 8 ~~~~~~v~~g~~v~l~C~~~g~-P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~~~~~ 86 (616)
.++++.+.+|+.|.|.|.+.|. |.|.|+|+|+|..+...++|.- ...
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~--------------------------------~~~ 61 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV--------------------------------GPQ 61 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe--------------------------------ccc
Confidence 4889999999999999999887 6789999999998875444321 245
Q ss_pred ceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcce--------------------------------------eecCCC
Q psy12426 87 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI--------------------------------------ARAKKG 128 (616)
Q Consensus 87 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~--------------------------------------~~~~~p 128 (616)
.|.|.++...|.|.|+|.|.|. |.........+.. +.....
T Consensus 62 ~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~ 140 (334)
T 1ry7_B 62 RLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANT 140 (334)
T ss_dssp ----------------------------------------------------------CCCCSCCTTCCCCEEEEETTCC
T ss_pred eEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCc
Confidence 8899999999999999999998 5433221111000 000000
Q ss_pred ceee--eecCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCC
Q psy12426 129 KCYH--LVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP 206 (616)
Q Consensus 129 ~~~~--~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~ 206 (616)
..+. ..|.|.+.+.|++ ++..+. ...... ..........|.|.++...|.|.|+|.|.|..|..... ..
T Consensus 141 v~l~C~~~g~p~~~v~W~~--~~~~~~---~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~---~~ 211 (334)
T 1ry7_B 141 VRFRCPAAGNPTPSISWLK--NGREFR---GEHRIG-GIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT---YT 211 (334)
T ss_dssp EEEECCCCCSSCCEEECCB--TTBCCC---TTSSTT-CCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEE---EE
T ss_pred EEEEEEccCCCCCeEEEEE--CCEECc---cccccc-ceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEE---EE
Confidence 1111 1277888899998 533322 111110 11223455689999999999999999999988763321 12
Q ss_pred EEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE----CCeeecccCc--EEEEec-------CCce
Q psy12426 207 HIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC----NDITIISKDR--FKIVND-------DKST 272 (616)
Q Consensus 207 ~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~----~~~~~~~~~~--~~~~~~-------~~~~ 272 (616)
+.+.. ...+|.+....+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+..+.. +.+... ....
T Consensus 212 l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (334)
T 1ry7_B 212 LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELE 291 (334)
T ss_dssp EEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCC
T ss_pred EEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccccccc
Confidence 22222 12345554445577889999999999999999999999999 6665543322 111111 1124
Q ss_pred EEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCC
Q psy12426 273 KLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSP 312 (616)
Q Consensus 273 ~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~ 312 (616)
.|.|.++...|.|.|+|.|.|..|....++.|.|...|.+
T Consensus 292 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 331 (334)
T 1ry7_B 292 VLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEE 331 (334)
T ss_dssp CEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC
T ss_pred EEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCC
Confidence 7999999999999999999999999999999999876643
No 46
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.90 E-value=3.5e-22 Score=178.29 Aligned_cols=192 Identities=37% Similarity=0.643 Sum_probs=159.3
Q ss_pred ecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc-cccceEEeccccCCCeEEEEEEE
Q psy12426 307 LDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD-VSGTYTRAENLIEGHDYNFRVKA 385 (616)
Q Consensus 307 ~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~~~~~y~~~v~a 385 (616)
..+|.+|.+ +.+.....+.+.|+|.++...++..+..|.|+++..+...|..... .....+.+.+|.+++.|.|+|.|
T Consensus 3 ~~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a 81 (197)
T 3lpw_A 3 MDTPGPPQD-LKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLA 81 (197)
T ss_dssp CCSCCCCEE-EEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEE
T ss_pred CCCCCCCCC-cEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEE
Confidence 356777776 7777888999999999887666777999999999887777766543 45678999999999999999999
Q ss_pred EecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCC
Q psy12426 386 VNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPAN 464 (616)
Q Consensus 386 ~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~ 464 (616)
.|..|.+.++......+. ..+|.+|.++.+...+.+++.|+|.+|..+++..+.+|.|+|+..+. .|..... ..
T Consensus 82 ~~~~g~~~~s~~~~~~t~---~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~ 156 (197)
T 3lpw_A 82 ENEYGIGLPAETAESVKA---SERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT--VK 156 (197)
T ss_dssp EETTEECCCEECSSCEES---CCCCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEE--ES
T ss_pred EcCccccCCCCCccceec---CCCCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeec--cc
Confidence 999998877544444433 46788899999999999999999998877776679999999998776 6666543 34
Q ss_pred ccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEec
Q psy12426 465 ITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCK 504 (616)
Q Consensus 465 ~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~ 504 (616)
...+++.+|.|++.|.|+|+|.|..|.|++|..+..++.+
T Consensus 157 ~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s~~v~~~ 196 (197)
T 3lpw_A 157 VTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVIAK 196 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEECC
T ss_pred ccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCcccEecC
Confidence 7789999999999999999999999999999888776653
No 47
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.90 E-value=8.7e-23 Score=183.85 Aligned_cols=188 Identities=20% Similarity=0.296 Sum_probs=150.6
Q ss_pred EEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc-----cccceEEeccccCCCe
Q psy12426 304 VTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD-----VSGTYTRAENLIEGHD 378 (616)
Q Consensus 304 l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~-----~~~~~~~i~~L~~~~~ 378 (616)
+.....|.+|.+ +.+..... ++.|+|.+|...++.++.+|.|+++..+...|..... .....+.+.+|.+++.
T Consensus 3 l~~~~~P~~P~~-~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 80 (209)
T 2vkw_A 3 LAQADTPSSPSI-DQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETT 80 (209)
T ss_dssp --CCCCCCCCEE-EEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCE
T ss_pred ccccCCCcCCcc-cEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCe
Confidence 344567777776 66666655 6899999987666777999999999887778866543 2245899999999999
Q ss_pred EEEEEEEEecCcCCCCccccCCEEccCCCC-CCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceE
Q psy12426 379 YNFRVKAVNKIGESLPLVCQSPITAKDPFG-RPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEK 457 (616)
Q Consensus 379 y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~-~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~ 457 (616)
|.|+|.|.|..|.+.++ ..+.+.+... +|.+|.++.+...+.+++.|+|.+| .+++++|.+|.|+|+...+.|..
T Consensus 81 Y~~~V~A~n~~G~~~~s---~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p-~~~~~~i~~Y~v~~~~~~~~~~~ 156 (209)
T 2vkw_A 81 YAVRLAALNGKGLGEIS---AASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQ-DDGGSPIRHYLVRYRALSSEWKP 156 (209)
T ss_dssp EEEEEEEEETTEECCCC---CCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECC-CCTTSCCCEEEEEEEETTSCCCC
T ss_pred EEEEEEEEcCCcccCCc---ccccccccCCCCCCCCcccccccccCCeEEEEEECc-ccCCCCCceEEEEEECCCCCCce
Confidence 99999999999988764 3444444334 6888888888888999999999987 45566899999999984447776
Q ss_pred eEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCC
Q psy12426 458 ACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKA 497 (616)
Q Consensus 458 ~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~ 497 (616)
..........++|.+|.|++.|.|+|+|.|..|.|++|..
T Consensus 157 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~ 196 (209)
T 2vkw_A 157 EIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHF 196 (209)
T ss_dssp CEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred eeecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchh
Confidence 6666777789999999999999999999999999998864
No 48
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.90 E-value=5.9e-23 Score=197.90 Aligned_cols=260 Identities=10% Similarity=0.030 Sum_probs=171.5
Q ss_pred CCCCCceEecCCCeEEEEEEEeeecCC-----eeeeeeCCeeeee-------------ccceEEEeecCCCCCceeEeee
Q psy12426 6 RRHLGDIKLSAGTTLKFDANIIGEPVP-----HVDWRAGGNPLNL-------------RPIWEKCAQTEGDTPKGKVLDL 67 (616)
Q Consensus 6 ~~~~~~~~v~~g~~v~l~C~~~g~P~p-----~v~W~~~~~~l~~-------------~G~Y~C~a~n~~~~~~~~v~~~ 67 (616)
.+.|.++.+..|++|+|.|.+.+.|.| .|+|+|++..... .++|.....
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~------------- 70 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAA------------- 70 (313)
T ss_dssp EECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSC-------------
T ss_pred EcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEee-------------
Confidence 456889999999999999999998877 4899999875431 111111100
Q ss_pred ccCCccceeeccccCCCCCceEecCcccCCeEEEEEEEEcCC-CCCCCCCCCCcceeecCCCc----------------e
Q psy12426 68 IEGNHPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKG-GPGEPSDPTAPHIARAKKGK----------------C 130 (616)
Q Consensus 68 ~~~~~p~w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~-g~~~~~~~~~~~~~~~~~p~----------------~ 130 (616)
.........+|.|.+++..|+|.|+|.+.+.. |..... .. ......|. .
T Consensus 71 ----------~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~--~~--l~v~~~P~~~~~~~~~~~~~~~~~~ 136 (313)
T 4fqp_A 71 ----------RLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVD--IW--LRVLAKPQNTAEVQKVQLTGEPVPM 136 (313)
T ss_dssp ----------CTTSCCCBCCEEECSCCGGGCEEEEEEEECSSSCEEEEE--EE--ECCBBCCEEEEEECCBCCCSSCEEE
T ss_pred ----------ccCCcccceEEEECcCChhhCEEEEEEEeeccCcceeee--ee--eeeccCCcceecccceEeecCceEE
Confidence 00002234679999999999999999987543 322111 00 00111111 0
Q ss_pred ee--ee-cCcccccEEEEeeccCcccccccCCCceEecccCCC----CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCC
Q psy12426 131 YH--LV-GTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGD----TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP 203 (616)
Q Consensus 131 ~~--~~-g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~ 203 (616)
+. .. |.|.+.+.|++ ++..+. . .........+ ...|.|.....+|.|.|+|.|.|..+......
T Consensus 137 ~~C~~~~~~P~~~i~W~~--~~~~~~----~--~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~- 207 (313)
T 4fqp_A 137 ARCVSTGGRPPAQITWHS--DLGGMP----N--TSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLL- 207 (313)
T ss_dssp EEEEEEEEBSCCEEEEEE--TTCCEE----E--EEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEE-
T ss_pred EEEEccCccCCcEEEeec--CCcccc----c--cceeeeecccccccceeeeecccccccCeeEEEEEEccCcCcccee-
Confidence 00 11 67888999998 532221 0 0111111111 12478888899999999999999877644221
Q ss_pred CCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc-eeEEEECCeeecccCcEEEEecCCceEEEecCCCCC
Q psy12426 204 TAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP-TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRG 282 (616)
Q Consensus 204 ~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~ 282 (616)
.+.+. ...+|.+.........+..|+.+.|.|.+.|.|.| .+.|++++..+.... .... ..|.|.++...
T Consensus 208 --~~~l~-V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~---~~~~---~~L~i~~v~~~ 278 (313)
T 4fqp_A 208 --TVNLT-VYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA---VAQG---AQLLIRPVDKP 278 (313)
T ss_dssp --EEECC-BCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---EEET---TEEEECCCSSC
T ss_pred --eeecc-cccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce---EEeC---CEEEECcCChh
Confidence 11111 23456665555566677788999999999999999 699999998775432 2222 28999999999
Q ss_pred CcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy12426 283 DSGIYTLAVKNSWGTDKGTAKVTVLDIP 310 (616)
Q Consensus 283 ~~g~y~c~a~n~~g~~~~~~~l~v~~~p 310 (616)
|+|.|+|.|.|..|....++.|.|...|
T Consensus 279 d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 279 INTTLICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp CEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred hCEEEEEEEEeCCCcEEEEEEEEEEeCC
Confidence 9999999999999999888889888654
No 49
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.90 E-value=7.4e-24 Score=203.82 Aligned_cols=277 Identities=14% Similarity=0.108 Sum_probs=172.3
Q ss_pred CccCCCCCCceEecCCCeEEEEEEEee-ecCCeeeeeeCCeeeee-----ccceEEEeecCCCCCceeEeeeccCCccce
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANIIG-EPVPHVDWRAGGNPLNL-----RPIWEKCAQTEGDTPKGKVLDLIEGNHPIW 75 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~~g-~P~p~v~W~~~~~~l~~-----~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w 75 (616)
|.+. +.++++.+|++|+|.|.+.+ .|.+.|+|+|++..... ...|.-... +...+++.
T Consensus 2 Pv~v---~p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~---~~~~~r~~---------- 65 (308)
T 4fom_A 2 PIIV---EPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQ---GEYQGRVL---------- 65 (308)
T ss_dssp CSBC---CCSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEEC---TTTTTTEE----------
T ss_pred CEEc---CCEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceec---CcccceEE----------
Confidence 5554 34688999999999999764 45567999998765432 000000000 00001111
Q ss_pred eeccccCCCCCceEecCcccCCeEEEEEEEEcCC-CCCCCCCCCC----cceeecCCCc--------eee-----eecCc
Q psy12426 76 EKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKG-GPGEPSDPTA----PHIARAKKGK--------CYH-----LVGTL 137 (616)
Q Consensus 76 ~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~-g~~~~~~~~~----~~~~~~~~p~--------~~~-----~~g~p 137 (616)
.........+|.|.++...|+|.|+|.|.|.. |......... ........|. .+. ..|.|
T Consensus 66 --~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P 143 (308)
T 4fom_A 66 --FKNYSLNDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKP 143 (308)
T ss_dssp --ESCCSSSBCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBS
T ss_pred --eeccCCCceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcC
Confidence 00112335689999999999999999999863 3322210000 0000001111 111 12778
Q ss_pred ccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCc
Q psy12426 138 LKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPY 217 (616)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~ 217 (616)
.+.+.|++ +++.+. . ...............|.|..+..+|.|.|+|.|.|..|....+. .+.+. ...+|.
T Consensus 144 ~~~i~W~~--~~~~~~---~-~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~---~~~l~-V~~~P~ 213 (308)
T 4fom_A 144 VAHIDWEG--DLGEME---S-TTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRY---SFILD-IQYAPE 213 (308)
T ss_dssp CCEEEECC--CSSBCC---E-EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEE---EEECC-CCEEEE
T ss_pred CceEEEEE--CCcccc---c-ccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEE---eEEEE-EecCCe
Confidence 89999998 533322 0 00000000001123688999999999999999999877644321 12111 234566
Q ss_pred eeccCCcceEEEcCCeEEEEEEEeeecCc-eeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 218 INRDQLSDIKVRAGSNFEFDINVIGEPIP-TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 218 ~~~~~~~~~~v~~g~~~~l~c~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
+.........+..|+.+.|.|.+.|.|.| .+.|++++..+..... ..+...+.|.++...|+|.|+|.|.|..|
T Consensus 214 ~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~-----~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G 288 (308)
T 4fom_A 214 VSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL-----ASDNTLHFVHPLTFNYSGVYICKVTNSLG 288 (308)
T ss_dssp ECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB-----CSTTEEECCSCCCSCCCSEEEEEEEETTE
T ss_pred eEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE-----EcCCeEEEECCCChhhCEEEEEEEEeCCC
Confidence 55455556677788999999999999988 6999999887654321 12334677899999999999999999999
Q ss_pred CceeeEEEEEecCCC
Q psy12426 297 TDKGTAKVTVLDIPS 311 (616)
Q Consensus 297 ~~~~~~~l~v~~~p~ 311 (616)
....++.|.|..+|.
T Consensus 289 ~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 289 QRSDQKVIYISDPPH 303 (308)
T ss_dssp EEEEEEECCEECCC-
T ss_pred cEEEEEEEEEEcCCC
Confidence 999999999988775
No 50
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.90 E-value=5.4e-23 Score=202.65 Aligned_cols=314 Identities=8% Similarity=-0.049 Sum_probs=193.8
Q ss_pred ceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccccCCCCCceEe
Q psy12426 11 DIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTEGDTPKGKV 90 (616)
Q Consensus 11 ~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~~~~~~l~i 90 (616)
.+.+.+|++|.|.|.+.|.|.|.|+|+|++..+...+.+....... .....++... ..........|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~-~~~~~r~~~~----------~~~~~~~~~~L~I 71 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGP-SKLNDRADSR----------RSLWDQGNFPLII 71 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECS-STTGGGEECC----------HHHHHTTCCCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCC-cccccceeee----------eccccCCeEEEEE
Confidence 4678999999999999999999999999997543211111110000 0000000000 0000112567999
Q ss_pred cCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCC--------ceee--eecCcccccEEEEeeccCcccccccCCC
Q psy12426 91 LDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKG--------KCYH--LVGTLLKDSIYEQLKRSGLFDQFHLCPI 160 (616)
Q Consensus 91 ~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p--------~~~~--~~g~p~~~~~~~~~~~~~~~~~~~~~~~ 160 (616)
.++...|+|.|+|.|.|..+.... .+..+...+. ..+. ..|.|.+.+.|++ +++.
T Consensus 72 ~~v~~~D~G~Y~C~~~n~~~~~~l----~V~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~--~~~~--------- 136 (363)
T 1wio_A 72 KNLKIEDSDTYICEVEDQKEEVQL----LVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRS--PRGK--------- 136 (363)
T ss_dssp CSCCGGGCEEEEEEETTEEEEEEE----EEEEEEESSCSSEESBSCEEEEEECCTTCCCCEEEEC--SSSC---------
T ss_pred CCCCHHHCEEEEEEEEECCCcEEE----EEEeCCCCCceEEecCCCEEEEEEcCCCCCCeEEEEc--CCCc---------
Confidence 999999999999999987552111 1111111111 1111 2277888999998 4211
Q ss_pred ceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE
Q psy12426 161 WEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV 240 (616)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~ 240 (616)
. ......|.|.++..+|.|.|+|.|.|..+..... ..+.+. ..|.. +....+.+|+.+.|.|.+
T Consensus 137 ~------~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~---~~l~v~---~~p~~----~~~~~~~~G~~v~l~C~~ 200 (363)
T 1wio_A 137 N------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFK---IDIVVL---AFQKA----SSIVYKKEGEQVEFSFPL 200 (363)
T ss_dssp E------EEESSEEEECSBCGGGCEECEEEEEETTEEEEEC---CEECEE---CCSCS----EEEEEEETBCCEEEECCC
T ss_pred c------cccceEEEEeeCChhcCCEEEEEEecCCCeEEEE---EEEEEe---cCCCC----CCceEEecCCEEEEEEEE
Confidence 1 1234589999999999999999999875442211 112221 22222 255778899999999988
Q ss_pred ee-----ecCceeEEEECCeeecc--------cCcEEEEe----------cCCceEEEecCCCCCCcEEEEEEEEcC--C
Q psy12426 241 IG-----EPIPTKEWLCNDITIIS--------KDRFKIVN----------DDKSTKLKVFDSKRGDSGIYTLAVKNS--W 295 (616)
Q Consensus 241 ~~-----~p~~~~~W~~~~~~~~~--------~~~~~~~~----------~~~~~~l~i~~l~~~~~g~y~c~a~n~--~ 295 (616)
.+ .|.+.+.|++++..+.. +.++.+.. .+....|.|.++...|.|.|+|.|.|. .
T Consensus 201 ~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~ 280 (363)
T 1wio_A 201 AFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKT 280 (363)
T ss_dssp CCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTT
T ss_pred ecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhc
Confidence 87 78899999999987654 44444432 222459999999999999999999999 8
Q ss_pred CCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccC
Q psy12426 296 GTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIE 375 (616)
Q Consensus 296 g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~ 375 (616)
|.....+.+.|...+ +..+.|.|...... .+.. .+.|...+... .....+.|..+..
T Consensus 281 g~~~~~~~l~V~~v~-------------g~~~~l~C~~~g~p--~p~~--~i~W~~~~~~~------~~~~~l~i~~v~~ 337 (363)
T 1wio_A 281 GKLHQEVNLVVMRAT-------------QLQKNLTCEVWGPT--SPKL--MLSLKLENKEA------KVSKREKAVWVLN 337 (363)
T ss_dssp CCEEEEEEEEEEEEC-------------CCSSSEEEEEESSC--CTTC--CEEEECSSSSC------SEEESSSEEEESS
T ss_pred CeEEEEEeEEEEEec-------------CCCeeEEEEEcccc--CCCc--cEEEEeCCCce------eeeeeeeeeeecc
Confidence 988888888776433 33344444432111 0110 11121111100 1123356678888
Q ss_pred CCeEEEEEEEEecC
Q psy12426 376 GHDYNFRVKAVNKI 389 (616)
Q Consensus 376 ~~~y~~~v~a~n~~ 389 (616)
.+.+.|+|.|.|..
T Consensus 338 ~d~G~Y~C~a~~~~ 351 (363)
T 1wio_A 338 PEAGMWQCLLSDSG 351 (363)
T ss_dssp CCSEEEEEEECSSS
T ss_pred ccceeEEEEEecCC
Confidence 89999999998643
No 51
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.89 E-value=1.4e-24 Score=236.94 Aligned_cols=374 Identities=10% Similarity=0.048 Sum_probs=42.5
Q ss_pred ccCCCCCCceEecCCCeEEEEEEEee--ecCCeeeeeeCCeee-------------------------ee-------ccc
Q psy12426 3 HIDRRHLGDIKLSAGTTLKFDANIIG--EPVPHVDWRAGGNPL-------------------------NL-------RPI 48 (616)
Q Consensus 3 ~i~~~~~~~~~v~~g~~v~l~C~~~g--~P~p~v~W~~~~~~l-------------------------~~-------~G~ 48 (616)
.+...++..+.+.+|+.+.|.|.+.| .|.+.|+|++++..+ .+ +|.
T Consensus 225 ~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 304 (772)
T 3v2a_R 225 DVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGL 304 (772)
T ss_dssp EEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSE
T ss_pred eeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeE
Confidence 34445556688999999999999998 456689999987741 11 999
Q ss_pred eEEEeecCCCCCce-----------------------------eEeeeccCCccc----eeeccccCC------CCCceE
Q psy12426 49 WEKCAQTEGDTPKG-----------------------------KVLDLIEGNHPI----WEKCAQTEG------DTPKGK 89 (616)
Q Consensus 49 Y~C~a~n~~~~~~~-----------------------------~v~~~~~~~~p~----w~~~~~~~~------~~~~l~ 89 (616)
|+|.|.|..+.... ..+.|...|.|. |.+++.... ....|.
T Consensus 305 Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~L~ 384 (772)
T 3v2a_R 305 YTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLT 384 (772)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCC-------------------------------------------------------
T ss_pred EEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEccceeEE
Confidence 99999998664100 011222224443 998877632 237889
Q ss_pred ecCcccCCeEEEEEEEEcCCCCCCCCCCCCcce-eec-------CCCc-------eee----eecCcccc-cEEEEeecc
Q psy12426 90 VLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI-ARA-------KKGK-------CYH----LVGTLLKD-SIYEQLKRS 149 (616)
Q Consensus 90 i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~-~~~-------~~p~-------~~~----~~g~p~~~-~~~~~~~~~ 149 (616)
|.++...|.|.|+|.|.|..|....+....... ..+ ..|. .+. ..|.|.+. +.|++ ++
T Consensus 385 i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~--~~ 462 (772)
T 3v2a_R 385 IMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYW--QL 462 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEE--cC
Confidence 999999999999999999988665432111110 000 0110 111 22777775 99988 31
Q ss_pred Cc---cc--------ccccCCCceEe-------------------cccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCC
Q psy12426 150 GL---FD--------QFHLCPIWEKC-------------------AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 199 (616)
Q Consensus 150 ~~---~~--------~~~~~~~~~~~-------------------~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 199 (616)
+. +. .......|... .........|.|.++ .|.|.|+|.|.|..|...
T Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~ 540 (772)
T 3v2a_R 463 EEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGE 540 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccc
Confidence 10 00 00000011100 000111246667766 689999999999998654
Q ss_pred CCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEE--------------
Q psy12426 200 PSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKI-------------- 265 (616)
Q Consensus 200 ~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~-------------- 265 (616)
.. ..+.+. .+|.+... + ...+.+|+.+.|.|.+.+.|.+.+.|++++..+........
T Consensus 541 ~~---~~l~V~---~~p~i~~~-p-~~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (772)
T 3v2a_R 541 RV---ISFHVT---RGPEITLQ-P-DMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKL 612 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ee---EEEEEE---CCceeecc-C-CcccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeec
Confidence 32 112222 24544322 1 24577899999999999999999999998876543221111
Q ss_pred ------EecCCceEEEecCCCCCCcEEEEEEEEcCCCCce--eeEEEEE--ecCCCCCCCCccceeecCCeEEEEEeCCC
Q psy12426 266 ------VNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK--GTAKVTV--LDIPSPPEGPLKPSNITKSSCNLEWRAPR 335 (616)
Q Consensus 266 ------~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~--~~~~l~v--~~~p~~p~~~~~~~~~~~~~~~l~W~~~~ 335 (616)
........|.|.++...|.|.|+|.|.|..|... ....+.+ ..+|..-..+.......+..+.|.|....
T Consensus 613 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g 692 (772)
T 3v2a_R 613 NATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASG 692 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCc
Confidence 1112234599999999999999999999655432 2334444 33443322211223345677888887532
Q ss_pred CCCCCceEEEEEEEEeCCCCCE---EEccccccceEEeccccCCCeEEEEEEEEecCcCCCC
Q psy12426 336 DDGGTDILHYVVEKMDMETGRW---VPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLP 394 (616)
Q Consensus 336 ~~~~~~i~~y~v~~~~~~~~~~---~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~ 394 (616)
. +... +.|...+.... ..........+.|.++...+.+.|+|.|.|..|....
T Consensus 693 ~----P~p~--v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 748 (772)
T 3v2a_R 693 N----PPPQ--IMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKV 748 (772)
T ss_dssp --------------------------------------------------------------
T ss_pred c----CCCe--EEEEECCeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeE
Confidence 2 1112 22221111000 0001122457889999999999999999999997654
No 52
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.89 E-value=4.2e-22 Score=192.07 Aligned_cols=255 Identities=12% Similarity=0.096 Sum_probs=175.0
Q ss_pred CCceEecCCCeEEEEEEE-eeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccccCCCCCc
Q psy12426 9 LGDIKLSAGTTLKFDANI-IGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTEGDTPK 87 (616)
Q Consensus 9 ~~~~~v~~g~~v~l~C~~-~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~~~~~~ 87 (616)
...+.|.+|+.+.|.|.. .|.|.|.|+|+|++..+...++|.-.. ......
T Consensus 8 ~~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~----------------------------~~~~~~ 59 (312)
T 2y23_A 8 EVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVES----------------------------KGNKTK 59 (312)
T ss_dssp CCEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEE----------------------------ETTEEE
T ss_pred ceeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEE----------------------------eCCEEE
Confidence 346789999999999985 578999999999999988666665542 112358
Q ss_pred eEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcc-----------------------eeec--CCCceee--ee-cCccc
Q psy12426 88 GKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPH-----------------------IARA--KKGKCYH--LV-GTLLK 139 (616)
Q Consensus 88 l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~-----------------------~~~~--~~p~~~~--~~-g~p~~ 139 (616)
|.|.++...|.|.|+|.|.|..|..... ..... .... .....+. .. |.|.+
T Consensus 60 L~I~~~~~~D~G~Y~C~~~n~~g~~~s~-~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~ 138 (312)
T 2y23_A 60 MTFKDLGMDDLGIYSCDVTDTDGIASSY-LIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNA 138 (312)
T ss_dssp EEESSCCGGGCEEEEEEESSSCCCCEEE-EECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSC
T ss_pred EEECcCCccCCEEEEEEEEeCCCcEEEE-EEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCC
Confidence 9999999999999999999988854321 00000 0000 0011111 22 67888
Q ss_pred ccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEec---------
Q psy12426 140 DSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIAR--------- 210 (616)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~--------- 210 (616)
.+.|++ ++..+. ....+............|.|.++..+|.|.|+|.|.+..+..... +...
T Consensus 139 ~v~W~~--~~~~i~---~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~-----~~~~~~~~~~~~~ 208 (312)
T 2y23_A 139 KVNYIF--NEKEIF---EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHST-----VVLVGDVFKKLQK 208 (312)
T ss_dssp EEEEEE--TTEEEC---SSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEE-----EEECTHHHHHHHH
T ss_pred EEEEEE--CCEECe---eCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEE-----EEEcchhhhhhcc
Confidence 999998 533322 222233222222344569999999999999999997643332111 1110
Q ss_pred ---------cccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc-eeEEEECCeeecccCcEEEEecCCceEEEecCCC
Q psy12426 211 ---------AKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP-TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSK 280 (616)
Q Consensus 211 ---------~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~ 280 (616)
....+|.+... ....+..|+.+.|.|.+.+.|.+ .+.|++++..+..+.++.+. +....|.|.++.
T Consensus 209 ~~~~~~~~~~~~~~p~~~~~--~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~ 284 (312)
T 2y23_A 209 EAEFQRQEWIRKQGPHFVEY--LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFS 284 (312)
T ss_dssp HHHHHHHHHHHHHSSEEEEE--EEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCS
T ss_pred cccccccchhhccCCceeec--ceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCC
Confidence 01123554321 23678899999999999999988 99999999998766666554 335699999999
Q ss_pred CCCcEEEEEEEEcCCCCceeeEEEEE
Q psy12426 281 RGDSGIYTLAVKNSWGTDKGTAKVTV 306 (616)
Q Consensus 281 ~~~~g~y~c~a~n~~g~~~~~~~l~v 306 (616)
..|.|.|+|.|.|..|....++.|.+
T Consensus 285 ~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 285 KKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp GGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred HHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 99999999999999999888877765
No 53
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.89 E-value=5.8e-23 Score=198.31 Aligned_cols=255 Identities=13% Similarity=0.046 Sum_probs=174.8
Q ss_pred CCceEecCCCeEEEEEEEeeec-CCeeeeeeCCeeeee----ccceEEEeecCCCCCceeEeeeccCCccceeeccccCC
Q psy12426 9 LGDIKLSAGTTLKFDANIIGEP-VPHVDWRAGGNPLNL----RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTEG 83 (616)
Q Consensus 9 ~~~~~v~~g~~v~l~C~~~g~P-~p~v~W~~~~~~l~~----~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~~ 83 (616)
...+.|.+|+.|.|.|.+.|.| .|.|+|+|+|..+.. ..++ ..
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~--------------------------------~~ 59 (315)
T 1itb_B 12 KIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRI--------------------------------HQ 59 (315)
T ss_dssp CCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSS--------------------------------EE
T ss_pred ceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcE--------------------------------ec
Confidence 4477899999999999999988 889999999975432 1111 11
Q ss_pred CCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeec------------------CCCceee--e------ecCc
Q psy12426 84 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA------------------KKGKCYH--L------VGTL 137 (616)
Q Consensus 84 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~------------------~~p~~~~--~------~g~p 137 (616)
....|.|.++...|.|.|+|.|.|..|..... .....+.. .....+. . .|.|
T Consensus 60 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~--~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p 137 (315)
T 1itb_B 60 HKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK--ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNE 137 (315)
T ss_dssp CSSBEECTTCCGGGCSCCEECCCSSSCCCCEE--CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTC
T ss_pred cCCeEEECCCChhhCEEEEEEEeCCceEEEEE--EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCC
Confidence 13589999999999999999999988765433 11111100 1111111 2 3678
Q ss_pred ccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEE-eCCCCCCCCCCCCCEEe--ccccC
Q psy12426 138 LKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAV-NKGGPGEPSDPTAPHIA--RAKKV 214 (616)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~-n~~g~~~~s~~~~~~~~--~~~~~ 214 (616)
.+.+.|++ ++..+. ...... ......|.|.++..+|.|.|+|.|. |..|..........+.. .....
T Consensus 138 ~~~i~W~k--~~~~l~--~~~~~~------~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~ 207 (315)
T 1itb_B 138 LPKLQWYK--DCKPLL--LDNIHF------SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPT 207 (315)
T ss_dssp CCCCEEEE--TTEECC--CCSSSE------EEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCC
T ss_pred CCEEEEEE--CCEECC--CccceE------eecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCC
Confidence 88999998 533322 111111 1223489999999999999999999 77776421111111111 11245
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEE------EEecC------CceEEEecCCCCC
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFK------IVNDD------KSTKLKVFDSKRG 282 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~------~~~~~------~~~~l~i~~l~~~ 282 (616)
+|.+.......+.+..|+.+.|.|.+.+.|.+.+.|++++..+....... +.... ....|.|.++...
T Consensus 208 ~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 287 (315)
T 1itb_B 208 RPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESR 287 (315)
T ss_dssp CCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGG
T ss_pred CCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHH
Confidence 67775443334678899999999999999999999999999887543211 11111 1348999999999
Q ss_pred C-cEEEEEEEEcCCCCceeeEEEEEe
Q psy12426 283 D-SGIYTLAVKNSWGTDKGTAKVTVL 307 (616)
Q Consensus 283 ~-~g~y~c~a~n~~g~~~~~~~l~v~ 307 (616)
| .|.|+|.|.|..|....++.|.+.
T Consensus 288 d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 288 FYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp GGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred HcCCceEEEEecCCCceeEEEEEEec
Confidence 9 999999999999999888888764
No 54
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.89 E-value=2.3e-21 Score=197.15 Aligned_cols=396 Identities=12% Similarity=-0.014 Sum_probs=227.9
Q ss_pred CCCceEecCCCeEEEEEEEeeecCCee-----eeeeCCeee--------e------eccceEEEeecCCCCCce--eEee
Q psy12426 8 HLGDIKLSAGTTLKFDANIIGEPVPHV-----DWRAGGNPL--------N------LRPIWEKCAQTEGDTPKG--KVLD 66 (616)
Q Consensus 8 ~~~~~~v~~g~~v~l~C~~~g~P~p~v-----~W~~~~~~l--------~------~~G~Y~C~a~n~~~~~~~--~v~~ 66 (616)
.|++..|.+|+.|.|.|.+.| |.|.+ .|+|++..+ . ++| |+|.|.|..+.... .+..
T Consensus 5 ~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~~~~~l~i~~v~~d~g-Y~C~a~~~~~~~~~~~~l~V 82 (450)
T 1z7z_I 5 SPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQ-PMCYSNCPDGQSTAKTFLTV 82 (450)
T ss_dssp ESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTTTEEEEEEEEECSCBC-CEEEEEETTEEEEEECEEEE
T ss_pred CCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecCCCceEEEEEecccCCe-eEEEEeCCCCcceeEEEEEE
Confidence 378999999999999999999 99999 999997632 1 167 99999865432221 1111
Q ss_pred eccCCccceeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCccc---ccEE
Q psy12426 67 LIEGNHPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLK---DSIY 143 (616)
Q Consensus 67 ~~~~~~p~w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~---~~~~ 143 (616)
.. .|...... . .-..+..|+...+.|.+. |.+.+ .+.|
T Consensus 83 ~~---~P~~~~~~-----~---~~~~v~~G~~v~L~C~~~----------------------------g~~~~~~~~v~W 123 (450)
T 1z7z_I 83 YW---TPERVELA-----P---LPSWQPVGKNLTLRCQVE----------------------------GGAPRANLTVVL 123 (450)
T ss_dssp EB---CCSEEEEC-----C---CCSEECTTSEEEEEEEEE----------------------------CCBCGGGEEEEE
T ss_pred Ee---CCCcceec-----C---CCceEeeCCeEEEEEEec----------------------------CCCCCcCcEEEE
Confidence 10 11111000 0 001256789999999998 65555 7899
Q ss_pred EEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCC-----CCCCEEeccc-cCCCc
Q psy12426 144 EQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSD-----PTAPHIARAK-KVSPY 217 (616)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~-----~~~~~~~~~~-~~~P~ 217 (616)
++ ++..+. . ...........|.|.++..+|.|.|+|.|.|..|...... ....+.+... ..+|.
T Consensus 124 ~k--~g~~l~---~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~ 193 (450)
T 1z7z_I 124 LR--GEKELK---R-----EPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQ 193 (450)
T ss_dssp EE--TTEEEE---E-----EECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCE
T ss_pred ee--CCEEee---c-----ccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCE
Confidence 98 522221 0 0001122234899999999999999999999987532100 0011111111 23344
Q ss_pred eeccCCcceEEEcCCeEEEEEEEeee-c--CceeEEEECCeeecccCcEEEEecCCceEEE-ecCCCCCCcE--EEEEEE
Q psy12426 218 INRDQLSDIKVRAGSNFEFDINVIGE-P--IPTKEWLCNDITIISKDRFKIVNDDKSTKLK-VFDSKRGDSG--IYTLAV 291 (616)
Q Consensus 218 ~~~~~~~~~~v~~g~~~~l~c~~~~~-p--~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~-i~~l~~~~~g--~y~c~a 291 (616)
+. ....+..|+.+.|.|.+.+. | .+.+.|++++..+.. ++... +....+. ..++...|.| .|+|.|
T Consensus 194 ~~----~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~--~~~~~--~~~~~~~~~~~v~~~d~G~~~Y~C~a 265 (450)
T 1z7z_I 194 LV----SPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVTYG--NDSFSAKASVSVTAEDEGTQRLTCAV 265 (450)
T ss_dssp EE----CCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC--EEEEE--TTEEEEEEEEECCGGGCEEEEEEEEE
T ss_pred ec----CceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc--eEEec--CCceeEEEEEEeEhhhCCcEEEEEEE
Confidence 32 12678999999999999999 7 789999999988754 22222 2221221 2277899999 999999
Q ss_pred EcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEec
Q psy12426 292 KNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAE 371 (616)
Q Consensus 292 ~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~ 371 (616)
.|..|.......+.+...|.+...........+..+.|.|... .. + .+.| + +... ........+.|.
T Consensus 266 ~n~~g~~~~~~~l~V~~~~~p~i~~~~~~v~~G~~v~l~C~~~---p~-p----~i~W-~--g~~~--~~~~~~~~L~i~ 332 (450)
T 1z7z_I 266 ILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH---PR-A----KVTL-N--GVPA--QPLGPRAQLLLK 332 (450)
T ss_dssp EETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEEC-----------------------------CCCCCEEEE
T ss_pred ccCCccEEEEEEEEEecCCCCeEecCCeeEeCCCcEEEEEecC---CC-C----EeEE-C--CEEc--CCCCceEEEEEe
Confidence 9998888888888888755421111122455678899999864 11 1 1222 1 1111 011233468889
Q ss_pred cccCCCeEEEEEEEEecCc-CCCCccccCCEEccCCC--CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEE
Q psy12426 372 NLIEGHDYNFRVKAVNKIG-ESLPLVCQSPITAKDPF--GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEK 448 (616)
Q Consensus 372 ~L~~~~~y~~~v~a~n~~g-~~~~~~~s~~~~~~~~~--~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~ 448 (616)
.+...+.+.|.|.|.|..+ .......+..+.+..+. .....|.+ ........+.|....-.. +.- .|.|
T Consensus 333 ~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~--~~~~~g~~~~l~C~~~g~----P~p--~i~W 404 (450)
T 1z7z_I 333 ATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGN--WTWPENSQQTPMCQAWGN----PLP--ELKC 404 (450)
T ss_dssp CCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSE--EEEETTCEECCCCCCEEE----SCC--EEEE
T ss_pred cCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCc--eeEcCCCeEEEEEecccC----CCC--cEEE
Confidence 9988889999999997655 21111011122221100 01111222 233345667776653111 111 2344
Q ss_pred eeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCC
Q psy12426 449 KPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPG 492 (616)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g 492 (616)
...+. . ..+. ...+ .+.....-.|++.|.|..|..
T Consensus 405 ~~~g~---~--~~~~-g~~~---~v~~~d~G~Y~C~a~N~~G~~ 439 (450)
T 1z7z_I 405 LKDGT---F--PLPI-GESV---TVTRDLEGTYLCRARSTQGEV 439 (450)
T ss_dssp EETTT---E--ECCT-TSCE---ECCGGGCEEEEEEEEETTEEE
T ss_pred EECCc---c--cCCC-CCeE---eEehhhCeEEEEEEEeCCCce
Confidence 44442 0 1111 1122 244556678899999998864
No 55
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.89 E-value=1.3e-21 Score=176.88 Aligned_cols=190 Identities=20% Similarity=0.311 Sum_probs=151.2
Q ss_pred CCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-CCEEEccc-------------cccceEEeccccCC
Q psy12426 311 SPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET-GRWVPMGD-------------VSGTYTRAENLIEG 376 (616)
Q Consensus 311 ~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~-~~~~~~~~-------------~~~~~~~i~~L~~~ 376 (616)
.+|.+ +.+..++.+++.|+|.++...+ ..+.+|.|+++..+. ..|..... .....+.+.+|.++
T Consensus 3 ~pP~~-~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 80 (214)
T 2ibg_A 3 YPPTP-PNVTRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 80 (214)
T ss_dssp CCCCC-CEEEEEETTEEEEEEEEECCSS-CCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred CCCCC-CEeeEecCCEEEEEEECCCCCC-CCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCC
Confidence 45555 5667788999999999877654 589999999988543 67876653 24567899999999
Q ss_pred CeEEEEEEEEecCcCCCCccccCCEEccC--CCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-
Q psy12426 377 HDYNFRVKAVNKIGESLPLVCQSPITAKD--PFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG- 453 (616)
Q Consensus 377 ~~y~~~v~a~n~~g~~~~~~~s~~~~~~~--~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~- 453 (616)
+.|.|+|.|.|..|.+..+..+..+.+.. +..+|.+|.++.+...+.+++.|+|.+|..+.++.+.+|.|+|+..+.
T Consensus 81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~ 160 (214)
T 2ibg_A 81 HTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSA 160 (214)
T ss_dssp CEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCC
T ss_pred CEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCC
Confidence 99999999999999887766555555432 233566788888888899999999998764456679999999998764
Q ss_pred -CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEE
Q psy12426 454 -PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 454 -~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~ 502 (616)
.|............++|.+|.|++.|.|+|+|.|..|.|++|......|
T Consensus 161 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 210 (214)
T 2ibg_A 161 GEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRT 210 (214)
T ss_dssp SCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEEC
T ss_pred cceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEe
Confidence 6777666555678999999999999999999999999999987655444
No 56
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.89 E-value=2.3e-23 Score=216.14 Aligned_cols=294 Identities=10% Similarity=-0.022 Sum_probs=171.0
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeee-CCeeeee---------------------cc-ceEEEeecCC
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRA-GGNPLNL---------------------RP-IWEKCAQTEG 57 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~-~~~~l~~---------------------~G-~Y~C~a~n~~ 57 (616)
||.+. ..+.++.+.+|+.+.|.|.+.|.|.|.|+|+| +|..+.. +| .|+|.|.|..
T Consensus 114 p~~~~-~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~ 192 (524)
T 2ec8_A 114 PAKLF-LVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEG 192 (524)
T ss_dssp SSCSB-CCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC---
T ss_pred CCccc-ccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECC
Confidence 45555 45778889999999999999998879999998 7765521 89 9999999875
Q ss_pred CCCc-----------------------e--------eEeeeccCCccc-----eeeccccC----------------CCC
Q psy12426 58 DTPK-----------------------G--------KVLDLIEGNHPI-----WEKCAQTE----------------GDT 85 (616)
Q Consensus 58 ~~~~-----------------------~--------~v~~~~~~~~p~-----w~~~~~~~----------------~~~ 85 (616)
+... . ..+.|...|.|. |.+.+... ...
T Consensus 193 ~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (524)
T 2ec8_A 193 KSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQ 272 (524)
T ss_dssp -CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEE
T ss_pred ceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceE
Confidence 4310 0 111221113332 99887661 123
Q ss_pred CceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCc---cee--ecCCCce--------ee----eecCcccc-cEEEEee
Q psy12426 86 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP---HIA--RAKKGKC--------YH----LVGTLLKD-SIYEQLK 147 (616)
Q Consensus 86 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~---~~~--~~~~p~~--------~~----~~g~p~~~-~~~~~~~ 147 (616)
..|.|.++...|.|.|.|.|.|..|.........+ ..+ ....+.. +. ..|.|.+. +.|++
T Consensus 273 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k-- 350 (524)
T 2ec8_A 273 ATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIY-- 350 (524)
T ss_dssp EEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEES--
T ss_pred EEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEE--
Confidence 67899999999999999999998886644311100 000 0000011 11 22778888 99998
Q ss_pred ccCcccccccCCCceEecccCC----CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCC
Q psy12426 148 RSGLFDQFHLCPIWEKCAQTEG----DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQL 223 (616)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~ 223 (616)
++..+. ....... ..... ....|.|.++..+|.|.|+|.|.|..|....+ ..+.+ ..+|.+.....
T Consensus 351 ~g~~~~---~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~---~~l~V---~~~P~i~~~~~ 420 (524)
T 2ec8_A 351 MNRTFT---DKWEDYP-KSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIA---FNVYV---NTKPEILTYDR 420 (524)
T ss_dssp SSCBCS---SSBCCEE-SCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEE---EEEEE---CEEEEEEEEEC
T ss_pred CCeecc---CCcccee-EEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEE---EEEEE---ecCCeEeeccc
Confidence 543332 1111111 11111 23589999999999999999999998873321 12222 24565532211
Q ss_pred cceEEEcCCeEEEEEEEeeecCceeEEEECCeeecc--------cCc---EEEEecCCceE-EEecCCCCCCcEEEEEEE
Q psy12426 224 SDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS--------KDR---FKIVNDDKSTK-LKVFDSKRGDSGIYTLAV 291 (616)
Q Consensus 224 ~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~--------~~~---~~~~~~~~~~~-l~i~~l~~~~~g~y~c~a 291 (616)
+..| .|.|.+.|.|.|.+.|++++..+.. +.+ ......+.... ..+......|.|.|+|.|
T Consensus 421 ----~~~g---~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a 493 (524)
T 2ec8_A 421 ----LVNG---MLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKA 493 (524)
T ss_dssp ----CSSS---CEEEEEEEESCCEEECCCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEE
T ss_pred ----CcCc---EEEEEEEeecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEE
Confidence 2345 8999999999999999999765421 111 11111121111 123444458999999999
Q ss_pred EcCCCCceeeEEEEEecCCCCCC
Q psy12426 292 KNSWGTDKGTAKVTVLDIPSPPE 314 (616)
Q Consensus 292 ~n~~g~~~~~~~l~v~~~p~~p~ 314 (616)
.|..|.....+.|.|.+.+....
T Consensus 494 ~N~~G~~~~~~~l~V~e~~~~~~ 516 (524)
T 2ec8_A 494 YNDVGKTSAYFNFAFKGNNKEQI 516 (524)
T ss_dssp ECSSCEEECCCCCCC--------
T ss_pred EcCCCceEEEEEEEEecCCHHHc
Confidence 99999998888888887665443
No 57
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.89 E-value=3.4e-22 Score=205.01 Aligned_cols=271 Identities=11% Similarity=0.011 Sum_probs=159.6
Q ss_pred ceEecCCCeEEEEEEEeeecCCeeeeeeCCeeee--------------------eccceEEEeecCCCC-----------
Q psy12426 11 DIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLN--------------------LRPIWEKCAQTEGDT----------- 59 (616)
Q Consensus 11 ~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~--------------------~~G~Y~C~a~n~~~~----------- 59 (616)
......|+.+.|.|.+.|+|.|.|+|++++..+. .+|.|+|.|.|..|.
T Consensus 148 p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~ 227 (527)
T 3qs9_E 148 PYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLN 227 (527)
T ss_dssp EEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESS
T ss_pred CcEEecCCceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEe
Confidence 3445678889999999999999999999876541 189999999998765
Q ss_pred --C----c------e--eEeeecc-CCccc----eeeccccCCC-----------------CCceEecCcccCCeEEEEE
Q psy12426 60 --P----K------G--KVLDLIE-GNHPI----WEKCAQTEGD-----------------TPKGKVLDLIEGNQYEFRV 103 (616)
Q Consensus 60 --~----~------~--~v~~~~~-~~~p~----w~~~~~~~~~-----------------~~~l~i~~l~~~~~~~y~c 103 (616)
| . + ..+.|.. .|.|. |.+.+..... ...|.|.++...|+|.|+|
T Consensus 228 ~~p~~~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 307 (527)
T 3qs9_E 228 QTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTC 307 (527)
T ss_dssp SCCCCSCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEE
T ss_pred ccCccCCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEE
Confidence 1 1 1 2223432 25544 9998775322 1348999999999999999
Q ss_pred EEEcCCCCCCCCCC-CCcceeecCC-----------Cceee--eecCcccccEEEEeeccCcccccccCCCceEecccCC
Q psy12426 104 LAVNKGGPGEPSDP-TAPHIARAKK-----------GKCYH--LVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEG 169 (616)
Q Consensus 104 ~a~n~~g~~~~~~~-~~~~~~~~~~-----------p~~~~--~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (616)
.|.|. ........ .....+.... ...+. ..|.|.+.+.|++ ++..+. .... ...
T Consensus 308 ~a~N~-~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k--~g~~l~---~~~~------~~~ 375 (527)
T 3qs9_E 308 SSSKH-PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF--SRKSFP---CEQK------GLD 375 (527)
T ss_dssp EETTE-EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEE--TTEEEE---CBCC------BCS
T ss_pred EEEeC-CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEE--CCEECc---CCcc------ccc
Confidence 99987 11100000 0000000000 01111 2388889999998 532222 1111 112
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeE
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKE 249 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~ 249 (616)
....|.|.++..+|.|.|+|.|.|..|....+ +.+. ...+|.+.... . ...|.|.+.|.|.|.+.
T Consensus 376 ~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~-----~~L~-V~~~P~i~~~~-------~--~~~l~C~a~g~P~p~i~ 440 (527)
T 3qs9_E 376 NGYSISKFCNHKHQPGEYIFHAENDDAQFTKM-----FTLN-IRRKPQVLAEA-------S--ASQASCFSDGYPLPSWT 440 (527)
T ss_dssp SSSEEEEECCCTTCCSCEEEEEEETTEEEEEE-----EEEC---CCCEEEECC-------C--CE---EEEECSSCCEEE
T ss_pred CCcEEEEecCCcccCEEEEEEEEeCCCcEEEE-----EEEE-EecCCeEEEeC-------C--CCEEEEEEEEEcCCeEE
Confidence 44589999999999999999999998864421 2221 23567664221 1 23579999999999999
Q ss_pred EEECCeeecccCc------E-----EEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy12426 250 WLCNDITIISKDR------F-----KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLD 308 (616)
Q Consensus 250 W~~~~~~~~~~~~------~-----~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~ 308 (616)
|++++........ . ............|.-....|.|.|+|.|.|..|.....+.|.+..
T Consensus 441 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~ 510 (527)
T 3qs9_E 441 WKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPG 510 (527)
T ss_dssp EECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC----
T ss_pred EEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEecCC
Confidence 9987654311000 0 001111112233333334699999999999999998887775543
No 58
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.88 E-value=4.6e-22 Score=182.33 Aligned_cols=180 Identities=19% Similarity=0.251 Sum_probs=143.3
Q ss_pred CCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCE-EEccccccceEEeccccCCCeEEEEEEEEe
Q psy12426 309 IPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRW-VPMGDVSGTYTRAENLIEGHDYNFRVKAVN 387 (616)
Q Consensus 309 ~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~-~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n 387 (616)
++.+|.+ +.+......++.|+|.++ ...+.+|.|+++..+...+ ..........+.+.+|.+++.|.|+|.|.|
T Consensus 5 p~~~P~~-l~~~~~~~~si~l~W~~p----~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 79 (234)
T 3f7q_A 5 DLGAPQN-PNAKAAGSRKIHFNWLPP----SGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYG 79 (234)
T ss_dssp CCCCCEE-EEEEECSSSCEEEEEECC----SSCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCcc-eEEEEcCCCEEEEEEECC----CCccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEe
Confidence 4566666 777888889999999976 2378999999986543321 112224567899999999999999999999
Q ss_pred cCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-C-----ceEeEee
Q psy12426 388 KIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-P-----WEKACIV 461 (616)
Q Consensus 388 ~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~-----~~~~~~~ 461 (616)
..|.+.. +..+.+.+....|.+|.++.+...+.+++.|+|.+|...++ .|.+|.|+|+..++ . |......
T Consensus 80 ~~G~g~~---s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~ 155 (234)
T 3f7q_A 80 AQGEGPY---SSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNG-EITAYEVCYGLVNDDNRPIGPMKKVLVD 155 (234)
T ss_dssp TTEECCC---CCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSS-CCCEEEEEEEEBCTTSCBSSCCEECCCS
T ss_pred CCCcCCC---CCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCC-ceeEEEEEEEECCCCCCccCcceEEEec
Confidence 9998776 45667777778899999999999999999999998765444 79999999987654 2 3333334
Q ss_pred cCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCC
Q psy12426 462 PANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKA 497 (616)
Q Consensus 462 ~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~ 497 (616)
......++|.+|.|++.|.|+|+|.|..|.|++|..
T Consensus 156 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 191 (234)
T 3f7q_A 156 NPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREA 191 (234)
T ss_dssp CTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEE
T ss_pred CCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCc
Confidence 455679999999999999999999999999998763
No 59
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.88 E-value=5.7e-22 Score=188.81 Aligned_cols=253 Identities=13% Similarity=0.092 Sum_probs=166.6
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|.. .+.++.+.+|+.++|.|.+.| .|+|+|++..+.. .
T Consensus 12 ~P~i~~-~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~~~------~---------------------------- 52 (290)
T 2o26_X 12 PPSIHP-AQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNEM------V---------------------------- 52 (290)
T ss_dssp CCEESS-CSSEEEEETTSCEEEEEECTT----EEEEEEECSSSCE------E----------------------------
T ss_pred CCEEeC-CCCeEEEcCCCcEEEEECCCC----cEEEecCCcceee------e----------------------------
Confidence 577874 488999999999999999988 8999999987610 0
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeec----CCCcee--------ee---ecCcc-cccEEE
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA----KKGKCY--------HL---VGTLL-KDSIYE 144 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~----~~p~~~--------~~---~g~p~-~~~~~~ 144 (616)
......|.|.++...|.|.|+|.|.| |.. .. ..+..... ..+..+ .+ +.+|. +.+.|+
T Consensus 53 -~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~~-~~--~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~p~~~~v~W~ 126 (290)
T 2o26_X 53 -ENKKNEWIQEKAEATRTGTYTCSNSN--GLT-SS--IYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLI 126 (290)
T ss_dssp -EECSSEEEETTCCGGGCEEEEEEESS--SCE-EE--EEEEEECSSCCBCCCCCEEEETTSCEEECCCBSCCSCEEEEEE
T ss_pred -cCCCceEEEeccCHHhCeEEEEEeeC--Ccc-EE--EEEEEeCCCcccccccceEEecCCeEEEeCcCCCCCCceEEEE
Confidence 00126899999999999999999998 431 11 00000000 111111 11 12366 789997
Q ss_pred EeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeE-EEEEEEEeCCCCCCCCCCCCCEEecc-ccCCCceeccC
Q psy12426 145 QLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQY-EFRVLAVNKGGPGEPSDPTAPHIARA-KKVSPYINRDQ 222 (616)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~-~y~c~a~n~~g~~~~s~~~~~~~~~~-~~~~P~~~~~~ 222 (616)
+ .+|.. ........ . .....|.|.++..+|.| .|+|.|.|..|..... ...+.+.. ...+|.+.. .
T Consensus 127 ~--~~g~~---l~~~~~~~--~--~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~--~~~l~V~~~~~~~P~i~~-~ 194 (290)
T 2o26_X 127 E--CDGKS---LPTDLTFV--P--NPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSD--KFTLKVREAIKAIPVVSV-P 194 (290)
T ss_dssp E--TTSCC---CCTTCEEE--E--ETTTEEEEESCCGGGTTCEEEEEEEETTEEEECC--CEEEEEECCCCSCCEEEC-S
T ss_pred e--CCCcC---CCCCCcee--e--CCCCCEEEecccHHHCCCEEEEEEEECCceEEeE--EEEEEEEeCCCCCCcccc-C
Confidence 6 43311 11111111 1 12247999999999999 9999999985442211 12233321 235677643 3
Q ss_pred CcceEEEcCCeEEEEEEEeeecCce-eEEEECCeee----cccCcEEEEe---cCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEPIPT-KEWLCNDITI----ISKDRFKIVN---DDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p~~~-~~W~~~~~~~----~~~~~~~~~~---~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
+....+..|+.+.|.|.+.+.|.+. +.|++++..+ .......+.. ......|.|.++...|.|.|+|.|.|.
T Consensus 195 ~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~ 274 (290)
T 2o26_X 195 ETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNT 274 (290)
T ss_dssp CSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECS
T ss_pred CCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCC
Confidence 4455888999999999999999996 9999998763 2222222221 122358999999999999999999999
Q ss_pred CCCceeeEEEEEecCC
Q psy12426 295 WGTDKGTAKVTVLDIP 310 (616)
Q Consensus 295 ~g~~~~~~~l~v~~~p 310 (616)
.|.....+.|.|..+|
T Consensus 275 ~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 275 FGSANVTTTLKVVEKG 290 (290)
T ss_dssp SCEEEEEEEECC----
T ss_pred CCcEEEEEEEEEEeCC
Confidence 9999888888877654
No 60
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.88 E-value=2.3e-24 Score=235.09 Aligned_cols=294 Identities=15% Similarity=0.191 Sum_probs=0.0
Q ss_pred CceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee-------------------ccceEEEeecCCCC-----------
Q psy12426 10 GDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL-------------------RPIWEKCAQTEGDT----------- 59 (616)
Q Consensus 10 ~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~-------------------~G~Y~C~a~n~~~~----------- 59 (616)
....+.+|+.+.|.|.+.|+|.|.|+|+|+|..+.. +|.|+|.|.|..|.
T Consensus 338 ~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v 417 (772)
T 3v2a_R 338 SLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVV 417 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEE
Confidence 467799999999999999999999999999976532 89999999998553
Q ss_pred ---Cce-----------------eEeeeccCCccc-----eeecccc---------------------------------
Q psy12426 60 ---PKG-----------------KVLDLIEGNHPI-----WEKCAQT--------------------------------- 81 (616)
Q Consensus 60 ---~~~-----------------~v~~~~~~~~p~-----w~~~~~~--------------------------------- 81 (616)
|.- ..+.|...|.|. |.+.+..
T Consensus 418 ~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 497 (772)
T 3v2a_R 418 YVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKI 497 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcE
Confidence 100 011222223332 8774211
Q ss_pred -------------CCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcce--eecCCC-------ceee----eec
Q psy12426 82 -------------EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI--ARAKKG-------KCYH----LVG 135 (616)
Q Consensus 82 -------------~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~--~~~~~p-------~~~~----~~g 135 (616)
......|.|.++ .|.|.|+|.|.|..|.........+.. .....| ..+. ..|
T Consensus 498 ~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~~~ 575 (772)
T 3v2a_R 498 EVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADR 575 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEECCceeeccCCcccccCCceEEEEeccC
Confidence 001135556655 689999999999999776552221110 000011 0111 227
Q ss_pred CcccccEEEEeeccCcccccccCCC------------ceEec----ccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCC
Q psy12426 136 TLLKDSIYEQLKRSGLFDQFHLCPI------------WEKCA----QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 199 (616)
Q Consensus 136 ~p~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~----~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 199 (616)
.|.+.+.|++ ++..... ..... |.... ........|.|.++..+|.|.|+|.|.|..|...
T Consensus 576 ~p~~~v~W~k--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 652 (772)
T 3v2a_R 576 STFENLTWYK--LGPQPLP-IHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKR 652 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCcEEEE--cCCcccc-cccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeE
Confidence 7888899998 4322110 00000 00000 1111234599999999999999999999665433
Q ss_pred CCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCC
Q psy12426 200 PSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDS 279 (616)
Q Consensus 200 ~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l 279 (616)
.+. ...+.+. ...+|.+. ..+.+..+..|+.+.|.|.+.|.|.+.+.|++++..+..+.++.+.. ....|.|.++
T Consensus 653 ~s~-~~~l~v~-~~~~P~~~-~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~--~~~~L~I~~v 727 (772)
T 3v2a_R 653 HCV-VRQLTVL-ERVAPTIT-GNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD--GNRNLTIRRV 727 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEE-EEeeccc-ccCCCEee-cCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcC--CCcEEEECcC
Confidence 211 1112222 23567664 33456788999999999999999999999999999887666555443 2358999999
Q ss_pred CCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCC
Q psy12426 280 KRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPP 313 (616)
Q Consensus 280 ~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p 313 (616)
...|.|.|+|.|.|..|....++.|.|..+|...
T Consensus 728 ~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~ 761 (772)
T 3v2a_R 728 RKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKT 761 (772)
T ss_dssp ----------------------------------
T ss_pred CHHHCEEEEEEEEeCCcceeEEEEEEEECCCCcc
Confidence 9999999999999999999999999998877644
No 61
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.88 E-value=4.6e-21 Score=171.96 Aligned_cols=185 Identities=22% Similarity=0.351 Sum_probs=144.2
Q ss_pred EecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCC-CCCEEEccc---cccceEEeccccCCCeEEE
Q psy12426 306 VLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDME-TGRWVPMGD---VSGTYTRAENLIEGHDYNF 381 (616)
Q Consensus 306 v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~-~~~~~~~~~---~~~~~~~i~~L~~~~~y~~ 381 (616)
+..+|.+|.+ +.+.. ...++.|+|.++. +++..+.+|.|+++... ...|..... .....+.+ +|.+++.|.|
T Consensus 2 v~~~P~~P~~-~~~~~-~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~ 77 (205)
T 1cfb_A 2 VQDVPNAPKL-TGITC-QADKAEIHWEQQG-DNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTF 77 (205)
T ss_dssp CCCCCCCCEE-EEEEE-CSSEEEEEEECCC-CTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEE
T ss_pred cccCCCCCCC-cEEEe-cCCEEEEEEECcc-cCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEE
Confidence 4567888877 77777 8899999999874 45678999999998654 355643321 33455666 9999999999
Q ss_pred EEEEEecCcCCCCccccCCEEccCCCCCC-CCCCCCEEEEecCCeEEEEecCCCC-CCCCcceeEEEEEeeCCC--CceE
Q psy12426 382 RVKAVNKIGESLPLVCQSPITAKDPFGRP-DRPGQPTVTDWGKDHVDLEWTPPKK-DGGSPISQYIIEKKPKYG--PWEK 457 (616)
Q Consensus 382 ~v~a~n~~g~~~~~~~s~~~~~~~~~~~p-~~p~~~~~~~~~~~~v~l~W~~p~~-~~~~~i~~Y~i~~~~~~~--~~~~ 457 (616)
+|.|.|..|.+.++..+..+. +....| .+|.++.+...+.+++.|+|++|.. +.++.+.+|.|+|+..+. .|..
T Consensus 78 ~V~A~n~~G~~~~s~~~~~~~--T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~ 155 (205)
T 1cfb_A 78 RVIAFNKIGASPPSAHSDSCT--TQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN 155 (205)
T ss_dssp EEEEEETTEECCCCCCCCCEE--ECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE
T ss_pred EEEEEECCccCCCCCCceeEE--cCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEE
Confidence 999999999988763233333 334444 5788999998899999999998762 344569999999998776 4777
Q ss_pred eEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCC
Q psy12426 458 ACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSK 496 (616)
Q Consensus 458 ~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~ 496 (616)
..........++|.+|.|++.|.|+|+|.|..|.|+++.
T Consensus 156 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss 194 (205)
T 1cfb_A 156 NNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAA 194 (205)
T ss_dssp EEECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCC
T ss_pred EEecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCC
Confidence 665555678999999999999999999999999999643
No 62
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.88 E-value=7.1e-22 Score=191.58 Aligned_cols=251 Identities=8% Similarity=-0.036 Sum_probs=169.1
Q ss_pred CCceEecCCCeEEEEEEEeee---------cCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 9 LGDIKLSAGTTLKFDANIIGE---------PVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 9 ~~~~~v~~g~~v~l~C~~~g~---------P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
..++.|.+|+.|.|.|.+.|. |.|.|+|+|++..+......
T Consensus 36 ~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~------------------------------ 85 (329)
T 3oq3_B 36 TMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR------------------------------ 85 (329)
T ss_dssp EEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT------------------------------
T ss_pred cceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce------------------------------
Confidence 356779999999999998884 66899999999887632221
Q ss_pred ccCCCCCceEecCcccCCeE-EEEEEEEcCCCCCCCCCCCCcceeecCCCc--------------eee----eecCc-cc
Q psy12426 80 QTEGDTPKGKVLDLIEGNQY-EFRVLAVNKGGPGEPSDPTAPHIARAKKGK--------------CYH----LVGTL-LK 139 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~-~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~--------------~~~----~~g~p-~~ 139 (616)
.....|.|.++...|+| .|+|.|.|..|..... ... .+...+|. .+. ..|.| .+
T Consensus 86 ---~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~--~~~-~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~ 159 (329)
T 3oq3_B 86 ---VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQG--IVR-SHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYN 159 (329)
T ss_dssp ---EETTEEEESSCCGGGGGCCEEEEEECTTSCEEEE--EEE-EEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCC
T ss_pred ---eecceEEEcCCChHhCCCcEEEEEEeCCCceeeE--EEE-EEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCc
Confidence 11468999999999999 9999999988753222 100 11111221 111 22778 88
Q ss_pred ccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeC--CCCCCCCC-CCCCEEeccccCCC
Q psy12426 140 DSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNK--GGPGEPSD-PTAPHIARAKKVSP 216 (616)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~--~g~~~~s~-~~~~~~~~~~~~~P 216 (616)
.+.|++ ++..+. ......... ...|.|.++..+|.|.|+|.|.|. .|...... ....+.+...+..+
T Consensus 160 ~i~W~k--~~~~l~--~~~~~~~~~------~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~ 229 (329)
T 3oq3_B 160 NITWYK--NNQELI--IDGTKYSQS------GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHR 229 (329)
T ss_dssp EEEEEE--TTEECC--CSSSSEEEE------TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCC
T ss_pred eEEEEE--CCccCC--CCCceEecC------CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCC
Confidence 999999 533321 111111111 358999999999999999999997 65433210 00112222111111
Q ss_pred ceeccCCcceEEEcCCeEEEEEEEeeec---Cc-eeEEEECCeee-cccCcEEEE--ecC--CceEEEecCCCCCCcE-E
Q psy12426 217 YINRDQLSDIKVRAGSNFEFDINVIGEP---IP-TKEWLCNDITI-ISKDRFKIV--NDD--KSTKLKVFDSKRGDSG-I 286 (616)
Q Consensus 217 ~~~~~~~~~~~v~~g~~~~l~c~~~~~p---~~-~~~W~~~~~~~-~~~~~~~~~--~~~--~~~~l~i~~l~~~~~g-~ 286 (616)
.... .+....+..|+.+.|.|.+.+.| .+ .+.|++++..+ ..+.+.... ..+ ....|.|.++...|.| .
T Consensus 230 ~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~ 308 (329)
T 3oq3_B 230 FKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNT 308 (329)
T ss_dssp EEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCE
T ss_pred Ccee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCc
Confidence 1112 45568899999999999999998 67 88999998874 333322221 111 3458999999999999 9
Q ss_pred EEEEEEcCCCCceeeEEEEE
Q psy12426 287 YTLAVKNSWGTDKGTAKVTV 306 (616)
Q Consensus 287 y~c~a~n~~g~~~~~~~l~v 306 (616)
|+|.|.|..|.....+.+.+
T Consensus 309 Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 309 YTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEEecCCceEEEEEEEe
Confidence 99999999998887777665
No 63
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.88 E-value=8.3e-22 Score=196.85 Aligned_cols=252 Identities=15% Similarity=0.113 Sum_probs=172.0
Q ss_pred CCceEecCCCeEEEEEEE-eeecCCeeeeeeCCe---eeee----ccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 9 LGDIKLSAGTTLKFDANI-IGEPVPHVDWRAGGN---PLNL----RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 9 ~~~~~v~~g~~v~l~C~~-~g~P~p~v~W~~~~~---~l~~----~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
+.+..+.+|+.+.|.|.+ .|.|.|.|+|+|++. +... ..+|.
T Consensus 107 ~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~------------------------------ 156 (395)
T 1bih_A 107 THEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRIT------------------------------ 156 (395)
T ss_dssp EEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEE------------------------------
T ss_pred CcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEE------------------------------
Confidence 456778899999999995 899999999999872 1110 11111
Q ss_pred cCCCCCceEecCcccCCeE---EEEEEEEcCCCCCCCCCCC------C----------cce-------eecCCCceee--
Q psy12426 81 TEGDTPKGKVLDLIEGNQY---EFRVLAVNKGGPGEPSDPT------A----------PHI-------ARAKKGKCYH-- 132 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~---~y~c~a~n~~g~~~~~~~~------~----------~~~-------~~~~~p~~~~-- 132 (616)
......|.|.++...|.| .|+|.|.|..|........ . ... +.......+.
T Consensus 157 -~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~ 235 (395)
T 1bih_A 157 -AGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCM 235 (395)
T ss_dssp -ECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEE
T ss_pred -EcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEE
Confidence 112457999999999999 9999999988875422000 0 000 0000111111
Q ss_pred eecCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccc
Q psy12426 133 LVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK 212 (616)
Q Consensus 133 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~ 212 (616)
..|.|.+.+.|++ ++..+. .................|.|.++..+|.|.|+|.|.|..|...... ..+.+
T Consensus 236 ~~g~p~~~i~W~~--~g~~~~---~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~--~~l~V--- 305 (395)
T 1bih_A 236 YGSNPMGYPNYFK--NGKDVN---GNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHS--LKLTV--- 305 (395)
T ss_dssp EECSSCCCCEEEE--TTEECC---CCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEE--EEEEE---
T ss_pred eccCCCCeEEEEE--CCEEcC---CCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEE--EEEEE---
Confidence 2278888999999 533222 1111111111122334799999999999999999999887643211 11222
Q ss_pred cCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEE
Q psy12426 213 KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 213 ~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
..+|.+.........+..|+.+.|.|.+.|.|.+.+.|++++..+..+ ++.+... .|.|.++...|.|.|+|.|.
T Consensus 306 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~~~----~L~i~~~~~~d~G~Y~C~a~ 380 (395)
T 1bih_A 306 VSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVTDS----GLVIKGVKNGDKGYYGCRAT 380 (395)
T ss_dssp EEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEEETT----EEEESSCCSTTCEEEEEEEE
T ss_pred EcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEEECC----EEEEeeCCcccCEEEEEEEE
Confidence 245666443333378899999999999999999999999999987644 5554422 99999999999999999999
Q ss_pred cCCCCceeeEEEEE
Q psy12426 293 NSWGTDKGTAKVTV 306 (616)
Q Consensus 293 n~~g~~~~~~~l~v 306 (616)
|..|.....+.|.|
T Consensus 381 N~~G~~~~~~~l~V 394 (395)
T 1bih_A 381 NEHGDKYFETLVQV 394 (395)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred ccCCCceEEEEEEE
Confidence 99999888877765
No 64
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.87 E-value=2.4e-21 Score=200.90 Aligned_cols=284 Identities=15% Similarity=0.095 Sum_probs=170.2
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCC--eeeeeeCCeeee-----------------------e-------ccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVP--HVDWRAGGNPLN-----------------------L-------RPI 48 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p--~v~W~~~~~~l~-----------------------~-------~G~ 48 (616)
||.+... +....+.+|+.+.|.|.+.|.|+| .|+|+|||+.+. + +|.
T Consensus 114 ~P~~~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 192 (523)
T 2rcj_C 114 NPTVTLF-PPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRS 192 (523)
T ss_pred CCeEEec-CCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCce
Confidence 3555433 445567789999999999998765 899999986541 1 899
Q ss_pred eEEEeecCCCCC----------------------------ce--eEeeeccCCc---cc---eeeccccCC---------
Q psy12426 49 WEKCAQTEGDTP----------------------------KG--KVLDLIEGNH---PI---WEKCAQTEG--------- 83 (616)
Q Consensus 49 Y~C~a~n~~~~~----------------------------~~--~v~~~~~~~~---p~---w~~~~~~~~--------- 83 (616)
|+|.|.|..+.. .+ ..+.|...|. |. |.+++....
T Consensus 193 Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~ 272 (523)
T 2rcj_C 193 YSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQ 272 (523)
T ss_pred EEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEec
Confidence 999999975430 00 1222322233 32 999876521
Q ss_pred CC------CceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCc---ceeecCCCc-----------eee--eecCcc---
Q psy12426 84 DT------PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP---HIARAKKGK-----------CYH--LVGTLL--- 138 (616)
Q Consensus 84 ~~------~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~---~~~~~~~p~-----------~~~--~~g~p~--- 138 (616)
.. ..|.|.++...| |.|.|.|.|..|.......... ..+....|. .+. ..|.+.
T Consensus 273 ~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~ 351 (523)
T 2rcj_C 273 SSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDP 351 (523)
T ss_pred CCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCC
Confidence 11 278999999999 9999999999997543311111 111112221 111 125432
Q ss_pred -cccEEEEeeccCcccccccCCCceEecccCC---CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEe-cccc
Q psy12426 139 -KDSIYEQLKRSGLFDQFHLCPIWEKCAQTEG---DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA-RAKK 213 (616)
Q Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~-~~~~ 213 (616)
+.++|++ ++..+. ............+ ....|.|.++..+|.|.|+|.|.|..+..... ..+.. ....
T Consensus 352 ~~~v~W~k--~g~~l~---~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~---~~~~~~~~~~ 423 (523)
T 2rcj_C 352 QVKFNWYV--DGVQVH---NAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIE---KTISKAKGQP 423 (523)
T ss_pred ceEEEEEE--CCeEcc---CCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCcee---EEEEcccCCC
Confidence 4899998 533322 1111000000001 11248889999999999999999886653321 11221 1134
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCc--eeEEEECCeeecccCcEEE--EecCC---ceEEEecCCCCCCcEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP--TKEWLCNDITIISKDRFKI--VNDDK---STKLKVFDSKRGDSGI 286 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~--~~~W~~~~~~~~~~~~~~~--~~~~~---~~~l~i~~l~~~~~g~ 286 (616)
.+|.+....+....+..| .+.|.|.+.+.+.+ .+.|+++|..+........ ..++. ...|.+......|.|.
T Consensus 424 ~~P~v~~~~~~~~~~~~~-~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~ 502 (523)
T 2rcj_C 424 REPQVYTLPPSREEMTKN-QVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNV 502 (523)
T ss_pred CCCEEEEeCCChHHccCC-ceEEEEEEEeeECCCCEEEEEECCEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCe
Confidence 566654333333334444 49999999998666 8999999988764332222 11221 1235555555577999
Q ss_pred EEEEEEcCC
Q psy12426 287 YTLAVKNSW 295 (616)
Q Consensus 287 y~c~a~n~~ 295 (616)
|+|.|.|..
T Consensus 503 Y~C~a~n~~ 511 (523)
T 2rcj_C 503 FSCSVMHEA 511 (523)
T ss_pred EEEEEEcCC
Confidence 999999864
No 65
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.87 E-value=1e-21 Score=195.70 Aligned_cols=251 Identities=11% Similarity=0.062 Sum_probs=170.3
Q ss_pred CccCCCCCCceEecCCCeEEEEEEEeeecC---CeeeeeeCCeeeee-----ccceEEEeecCCCCCceeEeeeccCCcc
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANIIGEPV---PHVDWRAGGNPLNL-----RPIWEKCAQTEGDTPKGKVLDLIEGNHP 73 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~---p~v~W~~~~~~l~~-----~G~Y~C~a~n~~~~~~~~v~~~~~~~~p 73 (616)
|.+. ..+.+..+.+|+.+.|.|.+.+.|. +.|+|+|++..+.. .++|.-
T Consensus 104 p~~~-~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---------------------- 160 (388)
T 2v5m_A 104 QYYE-ADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLV---------------------- 160 (388)
T ss_dssp CCCC-CBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEE----------------------
T ss_pred cccc-cCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEE----------------------
Confidence 4444 3367789999999999999988754 78999999987753 222211
Q ss_pred ceeeccccCCCCCceEecCcccCCe-EEEEEEEEcCCCCCCC-CCCCCcceee-------------cCCCce------ee
Q psy12426 74 IWEKCAQTEGDTPKGKVLDLIEGNQ-YEFRVLAVNKGGPGEP-SDPTAPHIAR-------------AKKGKC------YH 132 (616)
Q Consensus 74 ~w~~~~~~~~~~~~l~i~~l~~~~~-~~y~c~a~n~~g~~~~-~~~~~~~~~~-------------~~~p~~------~~ 132 (616)
.....|.|.++...|. |.|+|.|.|..+.... +.......+. ...|.. +.
T Consensus 161 ---------~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~ 231 (388)
T 2v5m_A 161 ---------LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTIS 231 (388)
T ss_dssp ---------CTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEE
T ss_pred ---------ccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEE
Confidence 1246899999999999 9999999997643221 1000000010 011111 11
Q ss_pred ----eecCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEE
Q psy12426 133 ----LVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI 208 (616)
Q Consensus 133 ----~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~ 208 (616)
..|.|.+.+.|++ ++.... .................|.|.++..+|.|.|+|.|.|..|..... ..+.
T Consensus 232 l~C~~~g~p~p~v~W~~--~~~~~~---~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~---~~l~ 303 (388)
T 2v5m_A 232 LLCPAQGFPAPSFRWYK--FIEGTT---RKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVE---TVLT 303 (388)
T ss_dssp ECCCCEEESCCEEEEEE--ECTTSS---CEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEE---EEEE
T ss_pred EEEECCCCCCCEEEEEe--cCCCCc---ccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEE---EEEE
Confidence 1277888999998 411110 000000000011123489999999999999999999998863221 1122
Q ss_pred eccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEE
Q psy12426 209 ARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYT 288 (616)
Q Consensus 209 ~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~ 288 (616)
+. .+|.+. ..+....+..|+.+.|.|.+.+.|.+.+.|++++..+..+ ...|.|.++...|.|.|+
T Consensus 304 V~---~~p~~~-~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~----------~~~L~i~~v~~~d~G~Y~ 369 (388)
T 2v5m_A 304 VT---APLSAK-IDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS----------ESVLRIESVKKEDKGMYQ 369 (388)
T ss_dssp EE---EEEEEE-EESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC----------SSEEEESSCCGGGCEEEE
T ss_pred Ee---CCCccc-cCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC----------CCEEEEecCChhhCEEEE
Confidence 21 334442 2345678899999999999999999999999999887532 248999999999999999
Q ss_pred EEEEcCCCCceeeEEEEE
Q psy12426 289 LAVKNSWGTDKGTAKVTV 306 (616)
Q Consensus 289 c~a~n~~g~~~~~~~l~v 306 (616)
|.|.|..|....++.|.|
T Consensus 370 C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 370 CFVRNDRESAEASAELKL 387 (388)
T ss_dssp EEEECSSCEEEEEEEEEE
T ss_pred EEEEcCCCcEEEEEEEEe
Confidence 999999999888887765
No 66
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.87 E-value=2.1e-21 Score=194.54 Aligned_cols=255 Identities=18% Similarity=0.215 Sum_probs=176.0
Q ss_pred CccCCCCCCceEecCCCeEEEEEEE-eeecCCeeeeeeCCeeeee-ccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANI-IGEPVPHVDWRAGGNPLNL-RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~-~g~P~p~v~W~~~~~~l~~-~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
|.+....+.+..+.+|+.+.|.|.+ .|.|.|.|+|+|++..... ...+.
T Consensus 116 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~----------------------------- 166 (404)
T 3p3y_A 116 PLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVS----------------------------- 166 (404)
T ss_dssp CCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEE-----------------------------
T ss_pred CccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEE-----------------------------
Confidence 4444444667899999999999998 8999999999999854432 22211
Q ss_pred ccCCCCCceEecCcccCC-eEEEEEEEEcCCCCCCCCC-CCCccee-----ecCCC-----------------ceee---
Q psy12426 80 QTEGDTPKGKVLDLIEGN-QYEFRVLAVNKGGPGEPSD-PTAPHIA-----RAKKG-----------------KCYH--- 132 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~-~~~y~c~a~n~~g~~~~~~-~~~~~~~-----~~~~p-----------------~~~~--- 132 (616)
......|.|.++...| .|.|+|.|.|..|...... ....... ....| ..+.
T Consensus 167 --~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C 244 (404)
T 3p3y_A 167 --QGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLEC 244 (404)
T ss_dssp --ECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEEC
T ss_pred --EcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEE
Confidence 1124579999999999 4999999999877542211 0111000 00011 0111
Q ss_pred -eecCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc
Q psy12426 133 -LVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA 211 (616)
Q Consensus 133 -~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~ 211 (616)
..|.|.+.+.|++ ++..+. .... . .......|.|.++..+|.|.|+|.|.|..|..... ..+.+
T Consensus 245 ~~~g~p~~~v~W~~--~~~~~~----~~~~-~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~---~~l~V-- 309 (404)
T 3p3y_A 245 IASGVPTPDIAWYK--KGGDLP----SDKA-K---FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT---ISVRV-- 309 (404)
T ss_dssp CBCCSSCCEEEEEE--TTBCCC----TTTE-E---EEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEE---EEEEE--
T ss_pred EECCCCCCcEEEEE--CCEECC----CCcc-c---ccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEE---EEEEE--
Confidence 2277888999999 533222 1111 1 11223589999999999999999999988863321 11222
Q ss_pred ccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccC---cEEEEecCCceEEEecCCCCCCcEEEE
Q psy12426 212 KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD---RFKIVNDDKSTKLKVFDSKRGDSGIYT 288 (616)
Q Consensus 212 ~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~---~~~~~~~~~~~~l~i~~l~~~~~g~y~ 288 (616)
..+|.+ ...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... .... .. ..|.|.++...|.|.|+
T Consensus 310 -~~~p~~-~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~-~~---~~L~i~~v~~~d~G~Y~ 383 (404)
T 3p3y_A 310 -KAAPYW-LDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREV-AG---DTIIFRDTQISSRAVYQ 383 (404)
T ss_dssp -EEEEEE-EECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEE-ET---TEEEESSCCSSCCCEEE
T ss_pred -eCCCee-eccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEe-cC---CEEEEeecCHHHCEEEE
Confidence 234555 344566889999999999999999999999999999886543 2222 22 28999999999999999
Q ss_pred EEEEcCCCCceeeEEEEEec
Q psy12426 289 LAVKNSWGTDKGTAKVTVLD 308 (616)
Q Consensus 289 c~a~n~~g~~~~~~~l~v~~ 308 (616)
|.|.|..|.....+.+.|.+
T Consensus 384 C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 384 CNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EEEEETTEEEEEEEEEEEC-
T ss_pred EEEEeCCCcEEEEEEEEEEe
Confidence 99999999998888887754
No 67
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.87 E-value=1.6e-21 Score=187.97 Aligned_cols=251 Identities=8% Similarity=-0.005 Sum_probs=153.2
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|... |. ..|.+|+.|+|.|.+.|. .+.+.|+|+|..+... . .
T Consensus 24 ~P~i~~~-p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~-~-------------------------------~ 68 (316)
T 3vh8_G 24 KPFLSAW-PS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI-F-------------------------------H 68 (316)
T ss_dssp CCEEEEE-SC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH-H-------------------------------H
T ss_pred CCEeecc-CC-CccCCCCCEEEEEEccCC-CceEEEEeCCCcccee-e-------------------------------c
Confidence 4666644 45 568899999999999988 6799999999865410 0 0
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCC---CCCCCCCCcceeec-CCCc-------------eee---eecCcccc
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGP---GEPSDPTAPHIARA-KKGK-------------CYH---LVGTLLKD 140 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~---~~~~~~~~~~~~~~-~~p~-------------~~~---~~g~p~~~ 140 (616)
.......|.|.++...|.|.|+|.|.|..+. +..+.......... ..|. .+. .+..+...
T Consensus 69 ~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 148 (316)
T 3vh8_G 69 GRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEH 148 (316)
T ss_dssp HCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESSCCSE
T ss_pred CCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCCCCcE
Confidence 0122568999999999999999999875432 22221111111000 0110 111 11455667
Q ss_pred cEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCC--CCEEeccccCCCce
Q psy12426 141 SIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPT--APHIARAKKVSPYI 218 (616)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~--~~~~~~~~~~~P~~ 218 (616)
+.|++ ++..+. ................|.|.+++.+|.|.|+|.|.|..|....+... ..+.+.....+|.+
T Consensus 149 ~~w~k--~g~~~~----~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i 222 (316)
T 3vh8_G 149 FFLHK--EGISKD----PSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSL 222 (316)
T ss_dssp EEEEE--TTCCSC----CEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEE
T ss_pred EEEEE--CCCccc----cceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeE
Confidence 88988 532221 00000001111234579999999999999999999998753222222 23444444456666
Q ss_pred eccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEec-CCceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 219 NRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVND-DKSTKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 219 ~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
.... . ..+.+|+.+.|.|.+. .+.+.+.|++++..+........... .....|.|.++. |.|.|+|.|.|..+.
T Consensus 223 ~~~~-~-~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 223 SAQP-G-PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp EEES-C-SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBT
T ss_pred EeCC-C-CeecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCc
Confidence 4332 2 2568899999999997 47789999999876543221111111 223589999999 999999999997653
No 68
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.87 E-value=1e-20 Score=191.65 Aligned_cols=340 Identities=10% Similarity=0.024 Sum_probs=197.3
Q ss_pred CCCCceEecCCCeEEEEEEEeeecCC----eeeeeeCC--eeeee------------ccceEEEeecCCCCCceeEeeec
Q psy12426 7 RHLGDIKLSAGTTLKFDANIIGEPVP----HVDWRAGG--NPLNL------------RPIWEKCAQTEGDTPKGKVLDLI 68 (616)
Q Consensus 7 ~~~~~~~v~~g~~v~l~C~~~g~P~p----~v~W~~~~--~~l~~------------~G~Y~C~a~n~~~~~~~~v~~~~ 68 (616)
+.|.++.+.+|++|.|.|.+.|.|.| .|.|+|++ ..+.. .++|.-..
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--------------- 70 (438)
T 1qgc_4 6 QSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSG--------------- 70 (438)
T ss_dssp EECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEE---------------
T ss_pred ecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEc---------------
Confidence 44889999999999999999999874 89999974 32220 11211110
Q ss_pred cCCccceeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCC-CCC------cceeecCCC-------ceee--
Q psy12426 69 EGNHPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSD-PTA------PHIARAKKG-------KCYH-- 132 (616)
Q Consensus 69 ~~~~p~w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~-~~~------~~~~~~~~p-------~~~~-- 132 (616)
......|.|.+++..|+|.|+|.|.|..|...... ... ...+....+ ..+.
T Consensus 71 -------------~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~ 137 (438)
T 1qgc_4 71 -------------SRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVV 137 (438)
T ss_dssp -------------ETTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEE
T ss_pred -------------cCCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEE
Confidence 11245799999999999999999999876432110 000 001111111 0111
Q ss_pred --eec-Cccc-ccEEEEeeccCcccccccCCCceEec-ccCCC-----CCeEEeecccCCCeEEEEEEEEeCCCCCCCCC
Q psy12426 133 --LVG-TLLK-DSIYEQLKRSGLFDQFHLCPIWEKCA-QTEGD-----TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSD 202 (616)
Q Consensus 133 --~~g-~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~ 202 (616)
..| .|.+ .+.|++ ++..+. ........ ....+ ...|.|.++..+|.|.|+|.|.|..|...
T Consensus 138 C~~~g~~p~~~~v~W~k--~g~~~~----~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~--- 208 (438)
T 1qgc_4 138 CFLNNFYPKDINVKWKI--DGSERQ----NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP--- 208 (438)
T ss_dssp EEEEEEBSSCEEEEEEE--TTEEEC----TTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC---
T ss_pred EEEccccCCCcEEEEEE--CCEEcC----CCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCc---
Confidence 114 5666 799998 532221 11011000 11111 23689999999999999999999876532
Q ss_pred CCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeec--CceeEEEEC--Ceeec-----------------ccC
Q psy12426 203 PTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEP--IPTKEWLCN--DITII-----------------SKD 261 (616)
Q Consensus 203 ~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p--~~~~~W~~~--~~~~~-----------------~~~ 261 (616)
..+.+.....++. ...+....+.+|+.+.|.|.+.+.| .+.+.|+++ +..+. ...
T Consensus 209 --~~~~~~~~~~~~~--~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 284 (438)
T 1qgc_4 209 --IVKSFNRNECEVM--LVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKG 284 (438)
T ss_dssp --EEEEEETTC-CCE--EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTT
T ss_pred --eecccccccceeE--EecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCC
Confidence 1122222111222 2234567899999999999999988 679999986 43321 134
Q ss_pred cEEEEec--CCceEEEecCCCCCCcEEEEEEEEcCCC-----CceeeEEEEEecCC-CCCCC---CccceeecCCeEEEE
Q psy12426 262 RFKIVND--DKSTKLKVFDSKRGDSGIYTLAVKNSWG-----TDKGTAKVTVLDIP-SPPEG---PLKPSNITKSSCNLE 330 (616)
Q Consensus 262 ~~~~~~~--~~~~~l~i~~l~~~~~g~y~c~a~n~~g-----~~~~~~~l~v~~~p-~~p~~---~~~~~~~~~~~~~l~ 330 (616)
++.+... .....|.|.+++..|.|.|+|.|.|..+ .......+.+...+ .+|.- +-......+..+.|.
T Consensus 285 r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~ 364 (438)
T 1qgc_4 285 RFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLG 364 (438)
T ss_dssp TEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEE
T ss_pred cEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEE
Confidence 5555443 3456899999999999999999998444 22234566665422 22210 001112346788999
Q ss_pred EeCCCCCCCCceEEEEEEEEeCCCCCE-E-----Eccc--cccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 331 WRAPRDDGGTDILHYVVEKMDMETGRW-V-----PMGD--VSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 331 W~~~~~~~~~~i~~y~v~~~~~~~~~~-~-----~~~~--~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
|...... ..++ .+.|...+...- . .... .....+.|......+ +.|+|.|.|..|..
T Consensus 365 C~~~g~~-P~~~---~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~ 429 (438)
T 1qgc_4 365 CLVKGYF-PEPV---TVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASST 429 (438)
T ss_dssp EEEESCB-SSCC---EEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTE
T ss_pred EEecccc-CCCc---EEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCc
Confidence 9863221 1111 233332221110 0 0000 011246666665445 78889999988863
No 69
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.87 E-value=5.5e-22 Score=216.26 Aligned_cols=237 Identities=17% Similarity=0.203 Sum_probs=177.9
Q ss_pred ccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeC--------------CCCCEEEcccc-----------ccceEEec
Q psy12426 317 LKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDM--------------ETGRWVPMGDV-----------SGTYTRAE 371 (616)
Q Consensus 317 ~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~--------------~~~~~~~~~~~-----------~~~~~~i~ 371 (616)
+.+..++.+++.|+|.+|...++..+.+|.|+++.. +...|...... ....+.+.
T Consensus 475 l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~ 554 (897)
T 2dtg_E 475 FSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMR 554 (897)
T ss_dssp CSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEEC
T ss_pred EEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccceEeC
Confidence 677888999999999988766667899999998764 12356543321 14679999
Q ss_pred cccCCCeEEEEEEE-EecCcCCC-CccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEe
Q psy12426 372 NLIEGHDYNFRVKA-VNKIGESL-PLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKK 449 (616)
Q Consensus 372 ~L~~~~~y~~~v~a-~n~~g~~~-~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~ 449 (616)
+|.|++.|.|+|.| .|..|.+. ++..+..+.+.+...+|++|.++.+...+.+++.|+|.+|..+++ .|.+|+|+|+
T Consensus 555 ~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG-~I~~Y~V~~~ 633 (897)
T 2dtg_E 555 GLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNG-NITHYLVFWE 633 (897)
T ss_dssp SCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSS-SCSEEECCEE
T ss_pred CCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCC-CeeEEEEEEE
Confidence 99999999999999 89888732 123366677788888999999999999999999999998865555 5999999987
Q ss_pred eCCC------------------------------------------------------------------CceEe-----
Q psy12426 450 PKYG------------------------------------------------------------------PWEKA----- 458 (616)
Q Consensus 450 ~~~~------------------------------------------------------------------~~~~~----- 458 (616)
..+. .|...
T Consensus 634 ~~~~~~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~~~~n~v 713 (897)
T 2dtg_E 634 RQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVV 713 (897)
T ss_dssp EECCCCSCTTCSSSCSCCCCCC----------------------------------------------------------
T ss_pred ECCCCccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEEccCceE
Confidence 5322 01100
Q ss_pred -E-------------------------eecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCee
Q psy12426 459 -C-------------------------IVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVI 512 (616)
Q Consensus 459 -~-------------------------~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~ 512 (616)
. ........++|.+|.|++.|.|+|+|.|..|.|++......+...+.+.
T Consensus 714 ~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~---- 789 (897)
T 2dtg_E 714 FVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPE---- 789 (897)
T ss_dssp ----------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCC----
T ss_pred EccCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCc----
Confidence 0 0112347899999999999999999999999887522233333322100
Q ss_pred ccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCCCCCCCCceeeeE
Q psy12426 513 DQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQPISNGGSAIKGYE 592 (616)
Q Consensus 513 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~ 592 (616)
..+|.+|..+++...+.++|.|+|++|... ||.|.+|+
T Consensus 790 -----------------------------------------~~~p~~P~~l~~~~~~~~sv~LsW~~P~~~-nG~I~~Y~ 827 (897)
T 2dtg_E 790 -----------------------------------------AKADDIVGPVTHEIFENNVVHLMWQEPKEP-NGLIVLYE 827 (897)
T ss_dssp -----------------------------------------CCCCCCCCCCCCCSSSSSCCCCCCCCCCSC-SSCEEEEC
T ss_pred -----------------------------------------cCCCCCCcceEEEeCCCCEEEEEECCCCCC-CCCEEEEE
Confidence 134678888888888999999999998654 88999999
Q ss_pred EEEeecCC
Q psy12426 593 VERRERTS 600 (616)
Q Consensus 593 i~~~~~~~ 600 (616)
|.|+..++
T Consensus 828 V~y~~~~~ 835 (897)
T 2dtg_E 828 VSYRRYGD 835 (897)
T ss_dssp CCCBSSSB
T ss_pred EEEEECCC
Confidence 99997765
No 70
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.87 E-value=9.1e-21 Score=180.35 Aligned_cols=212 Identities=18% Similarity=0.234 Sum_probs=150.5
Q ss_pred CCeEEEEEeCCC-CCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEE
Q psy12426 324 KSSCNLEWRAPR-DDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPIT 402 (616)
Q Consensus 324 ~~~~~l~W~~~~-~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~ 402 (616)
..++.|.|+++. ...+..+.+|.|+++.......... .....+.+|.+++.|.|+|.|.|..|.+.++ .+.
T Consensus 22 ~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~~~~----~~~~~~~~l~p~t~Y~~~V~A~n~~G~s~~s----~~~ 93 (290)
T 3l5i_A 22 YRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYT----VNATKLTVNLTNDRYLATLTVRNLVGKSDAA----VLT 93 (290)
T ss_dssp CEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCEEEE----ESSSEEEEEECSSCEEEEEEEEESSCBCCCE----EEE
T ss_pred CceEEEEEccCCchhcCCceEeEEEEEEeCCcCceeEe----cCCcEEEEEcCCceEEEEEEEEcCCCCCCCc----eEE
Confidence 478999999633 2245689999999987654432111 1234567899999999999999999988653 222
Q ss_pred ccCC-CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCC------ceEeEeecCCccEEEcCCCCC
Q psy12426 403 AKDP-FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGP------WEKACIVPANITATSVPDLKE 475 (616)
Q Consensus 403 ~~~~-~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~------~~~~~~~~~~~~~~~l~~L~p 475 (616)
+... ..+|.++.++.+.... +++.|+|.+|.. .+.+|.|+|+..+.. |.. ........+.+.+|.|
T Consensus 94 ~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~----~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~L~p 166 (290)
T 3l5i_A 94 IPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE----SVKKYILEWCVLSDKAPCITDWQQ--EDGTVHRTYLRGNLAE 166 (290)
T ss_dssp ECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS----CCCEEEEEEEEECSSSCCCCEEEE--EETTCSEEECCSCCCT
T ss_pred eecccccCCCccceeEEEeCC-CeEEEEEeCCCC----CCCcEEEEEEECCCCCCCCcCeEE--ccCCCcceEEecCcCC
Confidence 2221 1345555667766654 799999998643 689999999876541 333 2345577889999999
Q ss_pred CCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeec
Q psy12426 476 GEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDN 555 (616)
Q Consensus 476 ~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (616)
++.|.|+|+|+|..|.|..+. ..... ...
T Consensus 167 ~t~Y~~~V~A~n~~g~g~~~~----~~~~t-----------------------------------------------~~~ 195 (290)
T 3l5i_A 167 SKCYLITVTPVYADGPGSPES----IKAYL-----------------------------------------------KQA 195 (290)
T ss_dssp TCEEEEEEEEEETTEECCCEE----EEEES-----------------------------------------------SCC
T ss_pred ccEEEEEEEEEeCCcccccEE----EEeEc-----------------------------------------------ccc
Confidence 999999999999999887321 11111 113
Q ss_pred CCCCCCCCeEEeecCCcEEEEeeCCC-CCCCCceeeeEEEEeecCCC
Q psy12426 556 VPGKPSKPEATDVDKDHIKIKWQQPI-SNGGSAIKGYEVERRERTSG 601 (616)
Q Consensus 556 ~~~~P~~~~~~~~~~~~i~l~W~~p~-~~~~~~i~~Y~i~~~~~~~~ 601 (616)
+|..|..+.+...+.++|.|+|+++. .+.+|.|.+|+|.|+..++.
T Consensus 196 ~P~~~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~ 242 (290)
T 3l5i_A 196 PPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN 242 (290)
T ss_dssp CCSSCCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSC
T ss_pred CCCCCCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCC
Confidence 34444477788889999999999633 34589999999999977554
No 71
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.87 E-value=4.8e-21 Score=182.30 Aligned_cols=257 Identities=12% Similarity=0.009 Sum_probs=158.7
Q ss_pred CccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecccc
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQT 81 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~ 81 (616)
|.|... ..++.|.+|++++|.|.+.|. |+|+|++..+.. .+ ... ..
T Consensus 1 P~i~~~-~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~--~~-~~~--------------------------~~ 46 (289)
T 3mjg_X 1 LVVTPP-GPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ--EM-AKA--------------------------QD 46 (289)
T ss_dssp CCBCSS-CSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE--EE-EEC--------------------------TT
T ss_pred CeecCC-CCeEEEeCCCcEEEEEeccce----EEEECCCCCccc--ce-ecc--------------------------CC
Confidence 677655 667889999999999999875 999999987741 00 000 00
Q ss_pred CCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecC---CC----------------ceeee---ecCccc
Q psy12426 82 EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK---KG----------------KCYHL---VGTLLK 139 (616)
Q Consensus 82 ~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~---~p----------------~~~~~---~g~p~~ 139 (616)
......|.|.++...|.|.|+|.|.|..|...... ....+... .| ..+.+ +..|.+
T Consensus 47 ~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~--~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~p~~ 124 (289)
T 3mjg_X 47 GTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDER--KRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVTDPQL 124 (289)
T ss_dssp SCEEEEEEECSCCGGGCEEEEEECCC------CCC--EEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBSCTTS
T ss_pred CceeEEEEEccCChhhCEEEEEEEcccCCCCcCcE--EeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcCCCCc
Confidence 00125789999999999999999999887632210 00011111 00 01111 135567
Q ss_pred ccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCcee
Q psy12426 140 DSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYIN 219 (616)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~ 219 (616)
.+.|++ ...-.. ....+ .....+. ...|.|.|+|.|.|..+...... ..+.+... .+|.+.
T Consensus 125 ~v~w~~--~~~~~~---~~~~~-------~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~--~~l~v~~~-~~p~i~ 185 (289)
T 3mjg_X 125 VVTLHE--KKGDVA---LPVPY-------DHQRGFS----GIFEDRSYICKTTIGDREVDSDA--YYVYRLQV-SSINVS 185 (289)
T ss_dssp CEEEEE--SSCCSC---CCCCE-------ETTTEEE----ECCCSSEEEEEEEETTEEEECCC--EEEEECCC-CCCCCE
T ss_pred eEEEEe--CCCCCc---cceee-------cCCcCee----eeccCcEEEEEEEeCCceeeeee--EEEEecCC-CCCCcE
Confidence 888988 310000 00000 0111222 36788999999998766533221 12332222 455554
Q ss_pred ccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEe-----cCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 220 RDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVN-----DDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 220 ~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~-----~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
.. +....+..|+.+.|.|.+.+.|.+.+.|++++............. ......|.|.++...|.|.|+|.|.|.
T Consensus 186 ~~-~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 264 (289)
T 3mjg_X 186 VN-AVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTES 264 (289)
T ss_dssp EE-ESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEET
T ss_pred Ee-CCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecC
Confidence 33 344678999999999999999999999998776543221111111 113468999999999999999999999
Q ss_pred CCCceeeEEEEEecCCCCCC
Q psy12426 295 WGTDKGTAKVTVLDIPSPPE 314 (616)
Q Consensus 295 ~g~~~~~~~l~v~~~p~~p~ 314 (616)
.|....++.|.+...|....
T Consensus 265 ~G~~~~~~~l~v~~~~~~~~ 284 (289)
T 3mjg_X 265 VNDHQDEKAINITVVESGHH 284 (289)
T ss_dssp TTTEEEEEEEEEEEEC----
T ss_pred CCCceeEEEEEEEEEecCcc
Confidence 99999999999987765543
No 72
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.87 E-value=8.7e-20 Score=173.46 Aligned_cols=213 Identities=20% Similarity=0.252 Sum_probs=164.8
Q ss_pred EEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEec--CCCCCCCCccceeecCCeEEEEEeCCCCCCCCce
Q psy12426 265 IVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLD--IPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDI 342 (616)
Q Consensus 265 ~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~--~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i 342 (616)
+........+.|.+|.+...|.|++.|.|..|.+..+. ..+.. .+.+|.+ +.+.......+.|+|.++. ..+
T Consensus 67 ~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~-~~~~t~~~~~~P~~-l~~~~~~~~sv~l~W~~p~----~~~ 140 (290)
T 3r8q_A 67 INLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQ-GVVTTLENVSPPRR-ARVTDATETTITISWRTKT----ETI 140 (290)
T ss_dssp EEECTTCCEEEECSCCSSCEEEEEEEEEETTEECCCEE-EEEECCCCCCCCEE-EEEEEECSSCEEEEEECCS----CCC
T ss_pred EEcCCCccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcc-eeEecCCCCCCCce-eEEEEcCCCeEEEEEeCCC----Ccc
Confidence 33445567999999999999999999999888765443 23332 3445554 6777788999999999752 368
Q ss_pred EEEEEEEEeCCCCCE-EEccccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEe
Q psy12426 343 LHYVVEKMDMETGRW-VPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDW 421 (616)
Q Consensus 343 ~~y~v~~~~~~~~~~-~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~ 421 (616)
.+|.|+++..+...+ ..........+.+.+|.+++.|.|+|.|.|..|.+... .+... ..|.+|.++.+...
T Consensus 141 ~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~----~~~~~---t~p~~P~~l~~~~~ 213 (290)
T 3r8q_A 141 TGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPV----VIDAS---TAIDAPSNLRFLAT 213 (290)
T ss_dssp CEEEEEEEESSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCE----EEEEE---CCCCCCEEEEEEEE
T ss_pred cEEEEEEEECCCCcceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCE----EEEec---CCCCCCCccEEEee
Confidence 999999987655443 33334566789999999999999999999998886642 22332 34778889999989
Q ss_pred cCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCC
Q psy12426 422 GKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEP 494 (616)
Q Consensus 422 ~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~ 494 (616)
+.+++.|+|.+|.. .+.+|.|+|+..++ .|............++|.+|.|++.|.|+|+|.|..|.|++
T Consensus 214 ~~~sv~l~W~~p~~----~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p 283 (290)
T 3r8q_A 214 TPNSLLVSWQPPRA----RITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEP 283 (290)
T ss_dssp ETTEEEEEEECCSS----CCCEEEEEEECTTSCCEECSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred CCCEEEEEEeCCCC----cccEEEEEEEeCCCCcceeEeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCc
Confidence 99999999998642 58999999998776 44433344566889999999999999999999999998874
No 73
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.87 E-value=1.2e-19 Score=171.89 Aligned_cols=214 Identities=21% Similarity=0.295 Sum_probs=168.0
Q ss_pred EEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEE
Q psy12426 265 IVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILH 344 (616)
Q Consensus 265 ~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~ 344 (616)
.........+.|.+|.+...|.|++.|.|..|.+. ...+.+..+|.+|.+ +.+.....+.+.|+|.++. ..+.+
T Consensus 61 ~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~t~p~~P~~-l~~~~~~~~sv~l~W~~p~----~~i~~ 134 (283)
T 1tdq_A 61 FRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESD-ASSTQFTTEIDAPKN-LRVGSRTATSLDLEWDNSE----AEAQE 134 (283)
T ss_dssp EEECTTCSEEEECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCCEE-EEEEEECSSCEEEEEECCS----SCCSE
T ss_pred EEeCCCCCEEEecCCCCCCEEEEEEEEECCCCCCC-CeeEEEECCCCCCCc-eEEEecCCCeEEEEecCCC----CCccE
Confidence 33345567899999999999999999999877654 445556667777776 7778888999999999764 36899
Q ss_pred EEEEEEeCCCCCEEEccc-cc---cceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEE
Q psy12426 345 YVVEKMDMETGRWVPMGD-VS---GTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTD 420 (616)
Q Consensus 345 y~v~~~~~~~~~~~~~~~-~~---~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~ 420 (616)
|.|+++..+...+..... .. ...+.+.+|.+++.|.|+|.|.|..|.+.+. .+... ..|.+|.++.+..
T Consensus 135 Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~----~~~~~---t~~~~P~~l~~~~ 207 (283)
T 1tdq_A 135 YKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPA----TMNAR---TELDSPRDLMVTA 207 (283)
T ss_dssp EEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCE----EEEEE---CCCCCCEEEEEEE
T ss_pred EEEEEEeCCCCcceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcce----EEEec---CCCCCCCccEEeE
Confidence 999998876655533322 33 6789999999999999999999998876542 22222 3456788899999
Q ss_pred ecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCC
Q psy12426 421 WGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSK 496 (616)
Q Consensus 421 ~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~ 496 (616)
.+.+++.|+|.+|. +.+.+|.|+|+..++.+.. .........++|.+|.|++.|.|+|+|.|..|.|+++.
T Consensus 208 ~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~ 278 (283)
T 1tdq_A 208 SSETSISLIWTKAS----GPIDHYRITFTPSSGISSE-VTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLEST 278 (283)
T ss_dssp ECSSCEEEEEECCC----SCCSEEEEEEECSSSCCEE-EEEESSCSEEEECCCCTTCCEEEEEEEEETTEECCCEE
T ss_pred ecCCEEEEEEeCCC----CcccEEEEEEEcCCCCeeE-EEeCCCccEEEECCCCCCCEEEEEEEEEcCCCCCccee
Confidence 99999999999753 3588999999987654333 34456788999999999999999999999999887654
No 74
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.87 E-value=8.2e-21 Score=180.73 Aligned_cols=258 Identities=14% Similarity=0.070 Sum_probs=164.1
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|. ..+.++.+.+|+.++|.|.+.| .|+|++++..... -.
T Consensus 4 ~p~i~-~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~-----~~---------------------------- 45 (289)
T 3ejj_X 4 APVIE-PSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWT-----LD---------------------------- 45 (289)
T ss_dssp CCEEE-SCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSE-----EC----------------------------
T ss_pred CcEec-CCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEE-----Ee----------------------------
Confidence 45565 4478899999999999999887 4999988753220 00
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceee-----cCCCceee------------eecCcccc-cE
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIAR-----AKKGKCYH------------LVGTLLKD-SI 142 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~-----~~~p~~~~------------~~g~p~~~-~~ 142 (616)
.......|.|.++...|.|.|+|.|.|..|..... ..+.... ...+..+. ..+.+.+. +.
T Consensus 46 ~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~--~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~ 123 (289)
T 3ejj_X 46 PESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTT--IHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVS 123 (289)
T ss_dssp CCSSCCEEEESSCCGGGCEEEEEECCC-----CEE--EEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEE
T ss_pred ccCCccEEEEeeeccccCEEEEEEEeccCCcceeE--EEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEE
Confidence 02234689999999999999999999887754322 1110000 01111111 11555544 99
Q ss_pred EEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc-ccCCCceecc
Q psy12426 143 YEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA-KKVSPYINRD 221 (616)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~-~~~~P~~~~~ 221 (616)
|++ .++... ........ .....|.|.++..+|.|.|+|.|.|..+.. .+ ....+.+.. ...+|.+. .
T Consensus 124 W~~--~~~~~~--~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~-~~-~~~~l~V~~~~~~~p~i~-~ 191 (289)
T 3ejj_X 124 LMR--EGGRQV--LRKTVYFF-----SPWRGFIIRKAKVLDSNTYVCKTMVNGRES-TS-TGIWLKVNRVHPEPPQIK-L 191 (289)
T ss_dssp EEE--GGGEEC--CTTCCEEE-----ETTTEEEESSCCGGGCEEEEEEEEETTEEE-EC-CCEEEEEESSCCCCCEEE-E
T ss_pred EEe--cCCeec--CCCccEEE-----CCCCCEEEeecccccCEEEEEEEEeCCCcc-cc-ccEEEEEEECCCCCCeEE-e
Confidence 987 433211 11111111 123479999999999999999999543221 11 112233322 22466664 3
Q ss_pred CCcceEEEcCCeEEEEEEEee-ecCceeEEEECCeeecccCcEEEEec--CCceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 222 QLSDIKVRAGSNFEFDINVIG-EPIPTKEWLCNDITIISKDRFKIVND--DKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 222 ~~~~~~v~~g~~~~l~c~~~~-~p~~~~~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
.+....+..|+.+.|.|.+.+ .|.+.+.|++++..+........... .....|.|.++...|.|.|+|.|.|..|..
T Consensus 192 ~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 271 (289)
T 3ejj_X 192 EPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTR 271 (289)
T ss_dssp ESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEE
T ss_pred cCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCc
Confidence 345566789999999999998 78999999999988754322221111 113589999999999999999999999999
Q ss_pred eeeEEEEEecCC
Q psy12426 299 KGTAKVTVLDIP 310 (616)
Q Consensus 299 ~~~~~l~v~~~p 310 (616)
..++.|.+...+
T Consensus 272 ~~s~~L~~~~~~ 283 (289)
T 3ejj_X 272 TATMNFQVVESH 283 (289)
T ss_dssp EEEEEEECC---
T ss_pred cccEEEEEEecc
Confidence 988888776544
No 75
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.86 E-value=4.8e-21 Score=194.72 Aligned_cols=318 Identities=12% Similarity=0.049 Sum_probs=187.0
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCC---eeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceee
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVP---HVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEK 77 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p---~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~ 77 (616)
||.+....+.+..+.+|+.+.|.|.+.|.|+| .|+|+|+|..+.....+.
T Consensus 85 ~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~--------------------------- 137 (450)
T 1z7z_I 85 TPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG--------------------------- 137 (450)
T ss_dssp CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT---------------------------
T ss_pred CCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc---------------------------
Confidence 45555445777889999999999999999998 999999999887322100
Q ss_pred ccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC------CCCCccee--ecCCCce-----------ee----ee
Q psy12426 78 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS------DPTAPHIA--RAKKGKC-----------YH----LV 134 (616)
Q Consensus 78 ~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~------~~~~~~~~--~~~~p~~-----------~~----~~ 134 (616)
......|.|.++...|.|.|+|.|.|..|..... ........ ....|.. +. ..
T Consensus 138 ----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~ 213 (450)
T 1z7z_I 138 ----EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLD 213 (450)
T ss_dssp ----TTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEE
T ss_pred ----cccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEee
Confidence 1113478999999999999999999997753311 00110000 0112211 11 12
Q ss_pred cC-c--ccccEEEEeeccCcccccccCCCceEecccCCCCCeEE-eecccCCCeE--EEEEEEEeCCCCCCCCCCCCCEE
Q psy12426 135 GT-L--LKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGK-VLDLIEGNQY--EFRVLAVNKGGPGEPSDPTAPHI 208 (616)
Q Consensus 135 g~-p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-i~~l~~~~~~--~y~c~a~n~~g~~~~s~~~~~~~ 208 (616)
|. | .+.+.|++ ++..+. . . ... ......+. ..++..+|.| .|+|.|.|..|....+ ..+.
T Consensus 214 g~~P~~~~~~~W~~--~~~~~~---~--~---~~~-~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~---~~l~ 279 (450)
T 1z7z_I 214 GLFPVSEAQVHLAL--GDQRLN---P--T---VTY-GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETL---QTVT 279 (450)
T ss_dssp SCTTGGGCEEEEEE--TTEECC---C--E---EEE-ETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEE---EEEE
T ss_pred CCCCCCceEEEEeC--CCEeCC---c--e---EEe-cCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEE---EEEE
Confidence 66 6 67788887 532221 1 1 111 11111111 2267899988 9999999988764321 1233
Q ss_pred eccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEE
Q psy12426 209 ARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYT 288 (616)
Q Consensus 209 ~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~ 288 (616)
+... .+|.+.. ....+.+|+.+.|.|.+. |.+.+.| +|..+.. .+....|.|.++...|.|.|+
T Consensus 280 V~~~-~~p~i~~---~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~--------~~~~~~L~i~~~~~~d~G~Y~ 343 (450)
T 1z7z_I 280 IYSF-PAPNVIL---TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP--------LGPRAQLLLKATPEDNGRSFS 343 (450)
T ss_dssp EECC-CCCEEEE---SCSEEETTCEEEEEEEC----------------------------CCCCCEEEECCGGGTTCEEE
T ss_pred EecC-CCCeEec---CCeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCC--------CCceEEEEEecCcccCCceEE
Confidence 2221 2365532 245889999999999997 8889999 6665511 123348999999999999999
Q ss_pred EEEEcCCC-C---ceeeEEEEEecCCCCCCCC--ccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc
Q psy12426 289 LAVKNSWG-T---DKGTAKVTVLDIPSPPEGP--LKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD 362 (616)
Q Consensus 289 c~a~n~~g-~---~~~~~~l~v~~~p~~p~~~--~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~ 362 (616)
|.|.|..+ . ....+.+.+..+|.....+ .......+..+.|.|...+. +.. .+.|...+. ... .
T Consensus 344 C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~----P~p--~i~W~~~g~---~~~-~ 413 (450)
T 1z7z_I 344 CSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGN----PLP--ELKCLKDGT---FPL-P 413 (450)
T ss_dssp EEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEE----SCC--EEEEEETTT---EEC-C
T ss_pred EEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccC----CCC--cEEEEECCc---ccC-C
Confidence 99997555 3 2356677777666544331 23455668888998875322 212 233333222 011 1
Q ss_pred cccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 363 VSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 363 ~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
....+ .+...+.+.|+|.|.|..|...
T Consensus 414 -~g~~~---~v~~~d~G~Y~C~a~N~~G~~~ 440 (450)
T 1z7z_I 414 -IGESV---TVTRDLEGTYLCRARSTQGEVT 440 (450)
T ss_dssp -TTSCE---ECCGGGCEEEEEEEEETTEEEE
T ss_pred -CCCeE---eEehhhCeEEEEEEEeCCCcee
Confidence 11122 4666788999999999998753
No 76
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.86 E-value=6.4e-21 Score=171.86 Aligned_cols=187 Identities=21% Similarity=0.231 Sum_probs=144.5
Q ss_pred CCCCCCCCccceeecCCeEEEEEeCCCCC---CCCceEEEEEEEEeCCCCC--EEEccccccceEEeccccCCCeEEEEE
Q psy12426 309 IPSPPEGPLKPSNITKSSCNLEWRAPRDD---GGTDILHYVVEKMDMETGR--WVPMGDVSGTYTRAENLIEGHDYNFRV 383 (616)
Q Consensus 309 ~p~~p~~~~~~~~~~~~~~~l~W~~~~~~---~~~~i~~y~v~~~~~~~~~--~~~~~~~~~~~~~i~~L~~~~~y~~~v 383 (616)
++.+|.+ +.+...+.+++.|+|.+|... ....+.+|.|+++..+... +... ......+.+.+|.+++.|.|+|
T Consensus 4 P~~~P~~-l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V 81 (211)
T 3p4l_A 4 PMMPPVG-VQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA-NATTLSYLVTGLKPNTLYEFSV 81 (211)
T ss_dssp CCCCCEE-EEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEE-EESSSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCC-EEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEe-CCCceEEEecCcCCCCEEEEEE
Confidence 4456665 777788899999999976532 2457899999998754432 2222 3456689999999999999999
Q ss_pred EEEecCcCCCCccccCCEEccCCCCCCC-CCCCCEEEEe--cCCeEEEEecCCCCCCCCcceeEEEEEeeCCC----Cce
Q psy12426 384 KAVNKIGESLPLVCQSPITAKDPFGRPD-RPGQPTVTDW--GKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG----PWE 456 (616)
Q Consensus 384 ~a~n~~g~~~~~~~s~~~~~~~~~~~p~-~p~~~~~~~~--~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~----~~~ 456 (616)
.|.|..|.+.+ +..+.+.+....|. +|.++.+... +.+++.|+|.+|...++ .+.+|.|+|+..+. .|.
T Consensus 82 ~A~n~~g~~~~---S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~ 157 (211)
T 3p4l_A 82 MVTKGRRSSTW---SMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANG-KITGYIIYYSTDVNAEIHDWV 157 (211)
T ss_dssp EEEETTEECCC---CCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCS-CCCEEEEEEESCTTSCGGGSE
T ss_pred EEEcCCCCCcc---ceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCC-CEEEEEEEEEECCCCCCCceE
Confidence 99999998776 45566666667776 7888888877 47899999998765444 79999999997765 233
Q ss_pred EeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEE
Q psy12426 457 KACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 457 ~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~ 502 (616)
. ....+....++|.+|.|++.|.|+|+|.|..|.|++|.+..+.+
T Consensus 158 ~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~ 202 (211)
T 3p4l_A 158 I-EPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRT 202 (211)
T ss_dssp E-EEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred E-EEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccC
Confidence 2 34556788999999999999999999999999999998765544
No 77
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.86 E-value=8.5e-21 Score=180.58 Aligned_cols=212 Identities=21% Similarity=0.239 Sum_probs=158.0
Q ss_pred EecCCCCCCcEEEEEEEEcCCCCceeeEEEEEec---CCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEe
Q psy12426 275 KVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLD---IPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMD 351 (616)
Q Consensus 275 ~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~---~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~ 351 (616)
.+..+.+...|.|++.|.|..|.+..+....... +|.++.+ +.+... .+++.|+|.++.. .+.+|.|+++.
T Consensus 64 ~~~~l~p~t~Y~~~V~A~n~~G~s~~s~~~~~~~~~~~~~p~~~-~~~~~~-~~si~l~W~~p~~----~i~~Y~v~~~~ 137 (290)
T 3l5i_A 64 KLTVNLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMD-LKAFPK-DNMLWVEWTTPRE----SVKKYILEWCV 137 (290)
T ss_dssp EEEEEECSSCEEEEEEEEESSCBCCCEEEEECCTTCCCCCCCEE-EEEEEE-TTEEEEEEECCSS----CCCEEEEEEEE
T ss_pred EEEEEcCCceEEEEEEEEcCCCCCCCceEEeecccccCCCccce-eEEEeC-CCeEEEEEeCCCC----CCCcEEEEEEE
Confidence 3455677889999999999998775543322222 1222222 333333 4799999997643 68999999986
Q ss_pred CCCC-----CEEEccccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeE
Q psy12426 352 METG-----RWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHV 426 (616)
Q Consensus 352 ~~~~-----~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v 426 (616)
.... .|..........+.+.+|.+++.|.|+|.|.|..|.+.. ..+...+....|..|.++.+...+.+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~----~~~~~~t~~~~P~~~p~~~~~~~~~~sv 213 (290)
T 3l5i_A 138 LSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSP----ESIKAYLKQAPPSKGPTVRTKKVGKNEA 213 (290)
T ss_dssp ECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEECCC----EEEEEESSCCCCSSCCCEEEEEECSSCE
T ss_pred CCCCCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCccccc----EEEEeEccccCCCCCCeeeEeeccCCEE
Confidence 4432 466666566677888999999999999999999998763 2334445567777777888888999999
Q ss_pred EEEecCCC-CCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCC
Q psy12426 427 DLEWTPPK-KDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKAS 498 (616)
Q Consensus 427 ~l~W~~p~-~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~ 498 (616)
.|+|.++. ...++.|.+|.|+|+..++.|.. ..+......++|.+|.|++.|.|+|+|.|..| |+.|...
T Consensus 214 ~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~ 284 (290)
T 3l5i_A 214 VLEWDQLPVDVQNGFIRNYTIFYRTIIGNETA-VNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEF 284 (290)
T ss_dssp EEEECCCCHHHHSSCCCEEEEEEEETTSCCEE-EEEETTCSEEEECSCCTTCEEEEEEEEEETTE-EEECCCE
T ss_pred EEEEcCCChhccCCEEEEEEEEEEeCCCCeEE-EEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCce
Confidence 99999543 23455799999999988765543 34467788999999999999999999999999 7666543
No 78
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.86 E-value=6.4e-21 Score=178.65 Aligned_cols=231 Identities=12% Similarity=0.117 Sum_probs=157.5
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCC-eeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVP-HVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
.|.|... |.++.|.+|+.+.|.|.+.|.|.| .|+|+|+|..+..
T Consensus 1 kP~i~~~-p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~---------------------------------- 45 (262)
T 3rjd_A 1 KAVITLQ-PPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQT---------------------------------- 45 (262)
T ss_dssp CCEEEES-SCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSC----------------------------------
T ss_pred CCeEecC-CCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeec----------------------------------
Confidence 4777755 788899999999999999999998 9999999987751
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCC-cce-ee-------cCCCceee--e-ecCcccccEEEEee
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTA-PHI-AR-------AKKGKCYH--L-VGTLLKDSIYEQLK 147 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~-~~~-~~-------~~~p~~~~--~-~g~p~~~~~~~~~~ 147 (616)
....|.|.++...|.|.|+|.|.|..+......... ... .. ...+..+. . .+.|.+.+.|++
T Consensus 46 ----~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~-- 119 (262)
T 3rjd_A 46 ----STPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYR-- 119 (262)
T ss_dssp ----CSSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEE--
T ss_pred ----cCCeEEEecCCcccCeEEEEEEecCCccccEEEEEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEE--
Confidence 135678888888888888888876554321110000 000 00 00011111 1 156777899998
Q ss_pred ccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceE
Q psy12426 148 RSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIK 227 (616)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~ 227 (616)
++..+. .......|.|.++..+|.|.|+|.|.|..+.... ...+.+.....+|.+.... ...
T Consensus 120 ~g~~~~-------------~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~---~~~l~V~~~~~~p~~~~~~--~~~ 181 (262)
T 3rjd_A 120 NGKAFK-------------FFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSA---GISVTVKELFPAPVLNASV--TSP 181 (262)
T ss_dssp TTEEEE-------------EEEECCCEEESSCCGGGCEEEEEEEESSSEEEEE---CEEEEEECSSCCCEEEESS--CSS
T ss_pred CCcccc-------------ccCCCCeEEEEECChhhCEEEEEEEeCCCCcccc---ceEEEeccCCCCCeEeecC--cee
Confidence 421111 1112347999999999999999999998754221 1224443333456554332 456
Q ss_pred EEcCCeEEEEEEEeeecC-c----eeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 228 VRAGSNFEFDINVIGEPI-P----TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 228 v~~g~~~~l~c~~~~~p~-~----~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
+..|+.+.|.|.+.+.|. + .+.|++++..+... .....|.|.++...|.|.|+|.|.|..|..
T Consensus 182 ~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 182 LLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR--------NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp EETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE--------ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred ecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc--------CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 889999999999999876 4 37889998876421 223489999999999999999999999964
No 79
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.86 E-value=1.8e-21 Score=193.09 Aligned_cols=297 Identities=13% Similarity=0.088 Sum_probs=183.7
Q ss_pred eeeccccCC---------CCCceEecCc-ccCCeEEEEEEEEcCCCCCCCCCCCCcceeec----CCCceee--------
Q psy12426 75 WEKCAQTEG---------DTPKGKVLDL-IEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA----KKGKCYH-------- 132 (616)
Q Consensus 75 w~~~~~~~~---------~~~~l~i~~l-~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~----~~p~~~~-------- 132 (616)
|++++.... ..+.|.|.++ ...|+|.|+|.|.|..|............... ..+..+.
T Consensus 42 W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~ 121 (384)
T 3kld_A 42 WKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 121 (384)
T ss_dssp EEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEE
T ss_pred EEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeE
Confidence 988877632 1345666665 78899999999999988643221000000000 0111111
Q ss_pred ee-----cCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCE
Q psy12426 133 LV-----GTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPH 207 (616)
Q Consensus 133 ~~-----g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~ 207 (616)
+. +.+...|.|.+ ++... ..... . ........|.|.++...|.|.|+|.|.|..|..........+
T Consensus 122 l~C~~~~~~~~~~~~W~~--~~~~~---~~~~~-~---~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~ 192 (384)
T 3kld_A 122 LLCGPPPHSGELSYAWIF--NEYPS---YQDNR-R---FVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPL 192 (384)
T ss_dssp ECCCCCSEESCEEEEEEE--TTEEC---CCSSS-E---EECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEE
T ss_pred EecCCCCCCCCeEEEEEE--CCCCC---Eeecc-E---EEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEE
Confidence 11 33456788888 42111 01111 1 112334579999999999999999999987653211111111
Q ss_pred Eecc----ccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCe-eecccCcEEEEecCCceEEEecCCCCC
Q psy12426 208 IARA----KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDI-TIISKDRFKIVNDDKSTKLKVFDSKRG 282 (616)
Q Consensus 208 ~~~~----~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~-~~~~~~~~~~~~~~~~~~l~i~~l~~~ 282 (616)
.+.. ....|.+....+....+..|+.+.|.|.+.|.|.|.+.|++++. .+.... .. ......|.|.++...
T Consensus 193 ~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~--~~~~~~L~I~~v~~~ 268 (384)
T 3kld_A 193 ILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKA--RR--HKSNGILEIPNFQQE 268 (384)
T ss_dssp EEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTC--EE--CTTSCEEEECSCCGG
T ss_pred EEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccc--ee--cCCCcEEEECCCChh
Confidence 1111 12234444455667788999999999999999999999999544 333221 11 122348999999999
Q ss_pred CcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC----CCEE
Q psy12426 283 DSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET----GRWV 358 (616)
Q Consensus 283 ~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~----~~~~ 358 (616)
|.|.|+|.|.|..|.......+.+..+|.....+-......+..+.|.|..... +... +.|...+. ....
T Consensus 269 D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~----P~p~--i~W~k~g~~l~~~~~~ 342 (384)
T 3kld_A 269 DAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGR----PKPT--YRWLKNGDPLLTRDRI 342 (384)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEE----SCCE--EEEEETTEECCCBTTE
T ss_pred hCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCcc----CCCe--EEEEECCEECCCCccE
Confidence 999999999999998888888888776653332223444567788888875322 1122 22222111 0000
Q ss_pred EccccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 359 PMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 359 ~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
. .....+.|..+...+.+.|+|.|.|..|...
T Consensus 343 ~---~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~ 374 (384)
T 3kld_A 343 Q---IEQGTLNITIVNLSDAGMYQCVAENKHGVIF 374 (384)
T ss_dssp E---EETTEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred E---EeCCEEEEeecChhhCEEEEEEEEeCCceEE
Confidence 1 1234788999999999999999999999753
No 80
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.86 E-value=7e-21 Score=169.36 Aligned_cols=130 Identities=25% Similarity=0.391 Sum_probs=98.4
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.|.|..|....+ ..+.+.....+|.+. ..+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 64 ~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~---~~l~v~~~~~~p~~~-~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~ 139 (194)
T 2a38_A 64 KLTIPAVTKANSGRYSLKATNGSGQATST---AELLVKAETAPPNFV-QRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYR 139 (194)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEE---EEEEEECCCEEEEEE-ECCCCEEECTTEEEEEEEEEEEESCCEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEEcCCceEeEE---EEEEEccCCCCCEEE-eCCccEEEcCCCEEEEEEEEEEecCCeEEEEE
Confidence 56666666777777777776665542211 112222222345443 33456788999999999999999999999999
Q ss_pred CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEE
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 306 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v 306 (616)
++..+....++.+...+....|.|.++...|.|.|+|.|.|..|.....+.|.|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 140 DGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp TTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 999988888888877777778999999999999999999999998887777765
No 81
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.85 E-value=1.1e-19 Score=164.26 Aligned_cols=179 Identities=20% Similarity=0.250 Sum_probs=151.1
Q ss_pred cCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeeccc--CcEEEEecCCceEEEecCCCCCCcEEEEEE
Q psy12426 213 KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISK--DRFKIVNDDKSTKLKVFDSKRGDSGIYTLA 290 (616)
Q Consensus 213 ~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~--~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~ 290 (616)
..+|.|. .+.++.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+...+....|.|.++...|.|.|+|.
T Consensus 17 ~~~P~~~--~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 94 (215)
T 3mtr_A 17 MYAPKLQ--GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCT 94 (215)
T ss_dssp CEEEEEE--CCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEE
T ss_pred ecCCccc--CCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEE
Confidence 3456662 345688999999999999999999999999999988755 466666666678999999999999999999
Q ss_pred EEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc-----ccc
Q psy12426 291 VKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD-----VSG 365 (616)
Q Consensus 291 a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~-----~~~ 365 (616)
|.|..|.....+.+.+..+|.+|.. +.+ ......+.|.|..+...++.++..|.++++..+...|..... ...
T Consensus 95 a~n~~g~~~~~~~l~v~~~P~~p~~-~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~ 172 (215)
T 3mtr_A 95 AVNRIGQESLEFILVQADTPSSPSI-DQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASME 172 (215)
T ss_dssp EECSSCEEEEEEEEEECCCCCCCEE-EEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHH
T ss_pred EEECCCceEEEEEEEECCCCCCCcc-eEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccccccccc
Confidence 9999999988999999998888865 444 456788999999888778889999999999887777875532 223
Q ss_pred ceEEeccccCCCeEEEEEEEEecCcCCCCc
Q psy12426 366 TYTRAENLIEGHDYNFRVKAVNKIGESLPL 395 (616)
Q Consensus 366 ~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~ 395 (616)
..+.|.+|.+++.|.|+|.|.|..|.+.++
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S 202 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEIS 202 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCC
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcc
Confidence 789999999999999999999999998875
No 82
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.85 E-value=1.6e-19 Score=172.66 Aligned_cols=136 Identities=17% Similarity=0.165 Sum_probs=106.0
Q ss_pred CceEEEecCC-CCCCcEEEEEEEEcCCCCcee-eEEEEE--ecCCCCCCCCccceee--cCCeEEEEEeCCCCCCCCceE
Q psy12426 270 KSTKLKVFDS-KRGDSGIYTLAVKNSWGTDKG-TAKVTV--LDIPSPPEGPLKPSNI--TKSSCNLEWRAPRDDGGTDIL 343 (616)
Q Consensus 270 ~~~~l~i~~l-~~~~~g~y~c~a~n~~g~~~~-~~~l~v--~~~p~~p~~~~~~~~~--~~~~~~l~W~~~~~~~~~~i~ 343 (616)
....+.|.+| .+...|.|+|.|.|..|.... ...+.. ..+|.+|.. +.+... ..+++.|+|.+|...+ ..+.
T Consensus 156 ~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~-~~v~~~~~~~~sv~l~W~~p~~~~-~~i~ 233 (303)
T 1i1r_A 156 TPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHN-LSVINSEELSSILKLTWTNPSIKS-VIIL 233 (303)
T ss_dssp CTTEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEE-EEEECCSSSSSCEEEEEECCGGGG-TSCE
T ss_pred CceEEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcc-eEEEEecCCCCEEEEEECCCCCCC-cccE
Confidence 3458899999 899999999999999987642 222221 135666665 444433 5689999999877643 4799
Q ss_pred EEEEEEEeCCCCCEEEcc----ccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCC
Q psy12426 344 HYVVEKMDMETGRWVPMG----DVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPF 407 (616)
Q Consensus 344 ~y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~ 407 (616)
+|.|+|+..+...|.... ......+.+.+|.+++.|.|+|+|.|..|.|.++.++..+.+.+.+
T Consensus 234 ~Y~v~y~~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 234 KYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEEEEEeCCCCCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 999999988777888764 3345789999999999999999999999999999999888877654
No 83
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.85 E-value=2.3e-22 Score=196.32 Aligned_cols=264 Identities=14% Similarity=0.074 Sum_probs=174.5
Q ss_pred CccCCCCCCceEecCCCeEEEEEEEe-------eecCCeeeeeeCCeeeeeccc--eEEEeecCCCCCceeEeeeccCCc
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANII-------GEPVPHVDWRAGGNPLNLRPI--WEKCAQTEGDTPKGKVLDLIEGNH 72 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~~-------g~P~p~v~W~~~~~~l~~~G~--Y~C~a~n~~~~~~~~v~~~~~~~~ 72 (616)
|.+.. .|+++.|.+|+.|.|.|.+. |.|.|.|+|+|++..+...+. ++..
T Consensus 19 p~~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~-------------------- 77 (339)
T 3o4o_C 19 RFRGR-HYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMW-------------------- 77 (339)
T ss_dssp EEEEE-CSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEE--------------------
T ss_pred HhhCc-CceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEE--------------------
Confidence 44553 48899999999999999998 999999999999987543221 1111
Q ss_pred cceeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcc--------------eeecCCCceee------
Q psy12426 73 PIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPH--------------IARAKKGKCYH------ 132 (616)
Q Consensus 73 p~w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~--------------~~~~~~p~~~~------ 132 (616)
.....|.|.++...|.|.|+|.|.|..|.........+. .+.......+.
T Consensus 78 ----------~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 147 (339)
T 3o4o_C 78 ----------AQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSE 147 (339)
T ss_dssp ----------EETTEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTT
T ss_pred ----------eeCCeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcc
Confidence 114589999999999999999999988744332100000 00001111111
Q ss_pred -eecCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCC-CCCCCEEec
Q psy12426 133 -LVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS-DPTAPHIAR 210 (616)
Q Consensus 133 -~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s-~~~~~~~~~ 210 (616)
..|.|.+.+.|++ ++..+. ....... .......|.|.++..+|.|.|+|.|.|..|..... .....+.+.
T Consensus 148 ~~~g~p~~~v~W~k--~g~~~~--~~~~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~ 219 (339)
T 3o4o_C 148 FTRDKTDVKIQWYK--DSLLLD--KDNEKFL----SVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIK 219 (339)
T ss_dssp TCCSSSCCCBCCEE--SSCBCC--TTCSSEE----ECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEE
T ss_pred cccCCCCceEEEec--CCeeCC--CCCceeE----EcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEE
Confidence 1256788999998 533322 1111111 11233589999999999999999999987753211 111122222
Q ss_pred c--ccCCCceeccCCcceEEEcCCeEEEEEEE---eeec-CceeEEEECCeeecc---------cCcEEEEecCC---ce
Q psy12426 211 A--KKVSPYINRDQLSDIKVRAGSNFEFDINV---IGEP-IPTKEWLCNDITIIS---------KDRFKIVNDDK---ST 272 (616)
Q Consensus 211 ~--~~~~P~~~~~~~~~~~v~~g~~~~l~c~~---~~~p-~~~~~W~~~~~~~~~---------~~~~~~~~~~~---~~ 272 (616)
. ...+|.+. ..+....+..|+.+.|.|.+ .+.| .+.+.|++++..+.. ..++.+...+. ..
T Consensus 220 ~~~~~~~P~i~-~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 298 (339)
T 3o4o_C 220 KKKEETIPVII-SPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEV 298 (339)
T ss_dssp CCCCCCCCEEC-CCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEE
T ss_pred cCCCCCCCEEe-cCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEE
Confidence 2 12356664 33667788899999999999 8988 889999999876532 22222222222 12
Q ss_pred EEEecCCCCCCc-EEEEEEEEcCCCCceeeEEEE
Q psy12426 273 KLKVFDSKRGDS-GIYTLAVKNSWGTDKGTAKVT 305 (616)
Q Consensus 273 ~l~i~~l~~~~~-g~y~c~a~n~~g~~~~~~~l~ 305 (616)
.|.|.++...|. |.|+|.|.|..|.....+.+.
T Consensus 299 ~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~ 332 (339)
T 3o4o_C 299 PLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVK 332 (339)
T ss_dssp CCEECSSCCCSCCCCCEEEEEETTEEECCBCCCC
T ss_pred EEEEEEechhhcCccEEEEEEeccCceEEEEEhh
Confidence 799999999997 999999999999877655443
No 84
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.85 E-value=6.8e-22 Score=193.76 Aligned_cols=268 Identities=9% Similarity=-0.010 Sum_probs=140.2
Q ss_pred CCCCceEecCCCeEEEEEEEeeecC-----------CeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccce
Q psy12426 7 RHLGDIKLSAGTTLKFDANIIGEPV-----------PHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIW 75 (616)
Q Consensus 7 ~~~~~~~v~~g~~v~l~C~~~g~P~-----------p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w 75 (616)
..++++.|.+|+.|.|.|.+.|.|. |.|+|+|++....... ... ......++
T Consensus 12 ~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~----~~~--~~~~~~~~----------- 74 (349)
T 4dep_C 12 DTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEE----PIN--FRLPENRI----------- 74 (349)
T ss_dssp CCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEE----ECC--CCCGGGCE-----------
T ss_pred ceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccc----ccc--ccccCceE-----------
Confidence 4567889999999999999997664 9999999985321000 000 00000000
Q ss_pred eeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcc--------------eeec--CCCceeee------
Q psy12426 76 EKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPH--------------IARA--KKGKCYHL------ 133 (616)
Q Consensus 76 ~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~--------------~~~~--~~p~~~~~------ 133 (616)
......|.|.++...|+|.|+|.|.|..|....+....+. .... .....+..
T Consensus 75 ------~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~ 148 (349)
T 4dep_C 75 ------SKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGY 148 (349)
T ss_dssp ------EEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTS
T ss_pred ------eecCCEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCccc
Confidence 1124589999999999999999999987754422100000 0000 00111111
Q ss_pred -ecCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCC-CCCCCCCCCCCEEecc
Q psy12426 134 -VGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKG-GPGEPSDPTAPHIARA 211 (616)
Q Consensus 134 -~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~-g~~~~s~~~~~~~~~~ 211 (616)
.|.|.+.+.|++ ++..++ ..... ......|.|.++..+|.|.|+|.|.|.. |..........+.+..
T Consensus 149 ~~g~p~~~v~W~k--~~~~l~---~~~~~------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 149 FPSSVKPTITWYM--GCYKIQ---NFNNV------IPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVG 217 (349)
T ss_dssp SCTTSCCEEEEEE--TTEECC---SCSSE------EEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred ccCCCCceEEEee--CCEECC---Cccce------eecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEc
Confidence 257888999998 532221 11111 1122579999999999999999999986 3320011112222222
Q ss_pred cc---CCCceeccCCcc-eEEEcCCeEEEEEEEe----eecCceeEEEECCeeecc-cCcEEEEe------cCC---ceE
Q psy12426 212 KK---VSPYINRDQLSD-IKVRAGSNFEFDINVI----GEPIPTKEWLCNDITIIS-KDRFKIVN------DDK---STK 273 (616)
Q Consensus 212 ~~---~~P~~~~~~~~~-~~v~~g~~~~l~c~~~----~~p~~~~~W~~~~~~~~~-~~~~~~~~------~~~---~~~ 273 (616)
.. .+|.+....... ..+..|+.+.|.|.+. +.|.+.+.|++++..+.. ..++.+.. .+. ...
T Consensus 218 ~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (349)
T 4dep_C 218 SPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQI 297 (349)
T ss_dssp CGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEEC
T ss_pred cCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEE
Confidence 11 156653322222 2788999999999999 568899999999987754 22222110 011 235
Q ss_pred EEecCCCCCCc-EEEEEEEEcCCCCceeeEEEEEec
Q psy12426 274 LKVFDSKRGDS-GIYTLAVKNSWGTDKGTAKVTVLD 308 (616)
Q Consensus 274 l~i~~l~~~~~-g~y~c~a~n~~g~~~~~~~l~v~~ 308 (616)
|.|.++...|. |.|+|.|.|..|.....+.|.+..
T Consensus 298 L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 298 LSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp C-------------CEEEEECSSCEEEEECC-----
T ss_pred EEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 99999999999 999999999999988888887754
No 85
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.85 E-value=2.7e-20 Score=166.02 Aligned_cols=133 Identities=20% Similarity=0.325 Sum_probs=98.0
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.|.|..|..... ..+.+...+....|.+ ...+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 63 ~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~-~~l~V~~~p~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~ 140 (197)
T 2j8h_A 63 QLIIASVTDDDATVYQVRATNQGGSVSGT-ASLEVEVPAKIHLPKT-LEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK 140 (197)
T ss_dssp EEEECSCCGGGCSEEEEEEEETTEEEEEE-EEEEEEEEEEECCSSC-BTTBEEEEEETTCCCEEEEEEEEESCCEEEEEE
T ss_pred EEEECcCCHHhCEEEEEEEEECCCceeEE-EEEEEcCCCcCCCCcc-ccccCeEEEeCCCEEEEEEEEEecCCCcEEEEE
Confidence 56677777777777777777765542211 1111111111122222 222355778899999999999999999999999
Q ss_pred CCeeecccCcEEEEecCCceEEEecC-CCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFD-SKRGDSGIYTLAVKNSWGTDKGTAKVTVL 307 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~-l~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 307 (616)
++..+....++.+...+....|.|.+ +...|.|.|+|.|.|..|.....+.|.|.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 141 GQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp SSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 99998877888887777778999999 99999999999999999988888887765
No 86
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.85 E-value=1.2e-20 Score=182.84 Aligned_cols=242 Identities=13% Similarity=0.087 Sum_probs=146.1
Q ss_pred CCCCceEecCCCeEEEEEEEeee-cCCeeeeeeCCee-------------------------------eee-------cc
Q psy12426 7 RHLGDIKLSAGTTLKFDANIIGE-PVPHVDWRAGGNP-------------------------------LNL-------RP 47 (616)
Q Consensus 7 ~~~~~~~v~~g~~v~l~C~~~g~-P~p~v~W~~~~~~-------------------------------l~~-------~G 47 (616)
++|+++.+.+|+.|.|.|.+.|. |.|.|+|+|++.. |.+ +|
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G 87 (327)
T 2wng_A 8 QPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAG 87 (327)
T ss_dssp CCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCE
T ss_pred cCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCe
Confidence 56899999999999999999997 9999999998643 211 99
Q ss_pred ceEEEeecCCCCCc-------eeEeeeccCCccceeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCc
Q psy12426 48 IWEKCAQTEGDTPK-------GKVLDLIEGNHPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP 120 (616)
Q Consensus 48 ~Y~C~a~n~~~~~~-------~~v~~~~~~~~p~w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~ 120 (616)
.|+|.|.|..+... ..+. +.....++.+.. + -..+..|+...+.|.+.
T Consensus 88 ~Y~C~a~n~~~~~~~~~~~~~~~l~-V~~~p~~p~i~~-----~-----~~~~~~g~~~~l~C~~~-------------- 142 (327)
T 2wng_A 88 TYYCVKFRKGSPDTEFKSGAGTELS-VRAKPSAPVVSG-----P-----AARATPQHTVSFTCESH-------------- 142 (327)
T ss_dssp EEEEEEEESSTTCEEEEECCCEEEE-EEBCCCCCEEEC-----C-----SSCBCTTCEEEEEEEEE--------------
T ss_pred EEEEEeecCCCcceeEeecCcEEEE-EEecCCCceeec-----c-----ccccCCCCEEEEEEEEe--------------
Confidence 99999999754311 1111 111111111110 0 12356789999999998
Q ss_pred ceeecCCCceeeeecCccc--ccEEEEeeccCcccccccCCCceEecccCCC----CCeEEeecccCCCeEEEEEEEEeC
Q psy12426 121 HIARAKKGKCYHLVGTLLK--DSIYEQLKRSGLFDQFHLCPIWEKCAQTEGD----TPKGKVLDLIEGNQYEFRVLAVNK 194 (616)
Q Consensus 121 ~~~~~~~p~~~~~~g~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~l~~~~~~~y~c~a~n~ 194 (616)
|.|.+ .+.|++ ++..+. ............. ...|.|.....++.|.|+|.|.|.
T Consensus 143 --------------g~p~~~~~v~W~k--~g~~l~----~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~ 202 (327)
T 2wng_A 143 --------------GFSPRDITLKWFK--NGNELS----DFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHV 202 (327)
T ss_dssp --------------EEBSSCCEEEEEE--TTEECC----CEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECT
T ss_pred --------------CccCCCcEEEEEE--CCEEcc----ccccccccccCCCceEEEEEEEEechhcCcCceEEEEEecc
Confidence 55444 788988 532221 1100000000011 114566666677789999999998
Q ss_pred CCCCCCCCCCCCEEec-cccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc--eeEEEECCeeecccCcEEEEecC-C
Q psy12426 195 GGPGEPSDPTAPHIAR-AKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP--TKEWLCNDITIISKDRFKIVNDD-K 270 (616)
Q Consensus 195 ~g~~~~s~~~~~~~~~-~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~--~~~W~~~~~~~~~~~~~~~~~~~-~ 270 (616)
.|...... ....+. ....+|.+..... . +.+|+.+.|.|.+.+.+++ .+.|++++..+.......+...+ +
T Consensus 203 ~~~~~~~~--~~~~~~~~v~~~P~i~~~~~-~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g 277 (327)
T 2wng_A 203 TLQGDPLR--GTANLSETIRVPPTLEVTQQ-P--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDG 277 (327)
T ss_dssp TSCSCCEE--EEEEGGGTBCBCCEEEEEEE-C--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTS
T ss_pred ccCCCccc--ceEEeccccCCCCEEEEecC-C--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCC
Confidence 77632110 011111 1345676643222 1 6789999999999996444 89999999987543221122111 1
Q ss_pred c----eEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 271 S----TKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 271 ~----~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
. ..|.|.++...|.|.|+|.|.|..|..
T Consensus 278 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 278 TYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp CEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred cEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 1 468899999999999999999988765
No 87
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.84 E-value=4.4e-21 Score=192.66 Aligned_cols=215 Identities=18% Similarity=0.265 Sum_probs=154.2
Q ss_pred CCCcEEEEEEEEcCCCCceeeE-EEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeC--CCCCE
Q psy12426 281 RGDSGIYTLAVKNSWGTDKGTA-KVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDM--ETGRW 357 (616)
Q Consensus 281 ~~~~g~y~c~a~n~~g~~~~~~-~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~--~~~~~ 357 (616)
..+.|.|.|.+.|..+...... ......+|.+|.+ + ...++.+++.|+|.+|...++..+..|.|+++.. ....|
T Consensus 304 s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~n-l-~~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~ 381 (536)
T 3fl7_A 304 PSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHY-L-TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGEC 381 (536)
T ss_dssp CCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSC-E-EEECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCE
T ss_pred CCCCCccEEEEeccccccCCCccccccccCCCcccc-e-EEEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcc
Confidence 4567889999999887654322 2223457777776 5 3467889999999998887777899999999863 22233
Q ss_pred EEccc----------cccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEE
Q psy12426 358 VPMGD----------VSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVD 427 (616)
Q Consensus 358 ~~~~~----------~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~ 427 (616)
..+.. .....+.+.+|.+++.|.|+|.|.|..|.+.++..+..+.+.+ .+.+|..+.+...+.+++.
T Consensus 382 ~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T---~~~~Ps~~~~~~~s~tSV~ 458 (536)
T 3fl7_A 382 GPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSI---NQTEPPKVRLEGRSTTSLS 458 (536)
T ss_dssp EECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEEC---CSCCCCEEEEEECCC-CCE
T ss_pred cccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEee---cccCCCCCceeeccCCeEE
Confidence 22211 2467899999999999999999999998754322345555554 3445656666778899999
Q ss_pred EEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEE
Q psy12426 428 LEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 428 l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~ 502 (616)
|+|.+|... ++.|.+|.|+|+..++. ...........+++|.+|.|++.|.|+|+|.|..|.|++|....+.|
T Consensus 459 LsW~pP~~~-ng~I~~Y~V~y~~~~~~-~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T 531 (536)
T 3fl7_A 459 VSWSIPPPQ-QSRVWKYEVTYRKKGDS-NSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQT 531 (536)
T ss_dssp EEEECCTTT-TTTCSEEEEEEEEC--C-CCCEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEEC
T ss_pred EEEECCcCC-CCcccEEEEEEEECCCC-ceEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEe
Confidence 999988544 45799999999987653 22233445678999999999999999999999999999988765544
No 88
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.84 E-value=3.1e-20 Score=168.00 Aligned_cols=196 Identities=19% Similarity=0.168 Sum_probs=146.5
Q ss_pred ecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCE-EEccccccceEEeccc-cCCCeEEEEEE
Q psy12426 307 LDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRW-VPMGDVSGTYTRAENL-IEGHDYNFRVK 384 (616)
Q Consensus 307 ~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~-~~~~~~~~~~~~i~~L-~~~~~y~~~v~ 384 (616)
..+|.+|.+ +.+.......+.|+|.++...+. ...|.|+++......+ ..........+.+.+| .+++.|.|+|.
T Consensus 5 g~pP~~P~~-l~~~~~~~~sv~l~W~~p~~~~~--~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~ 81 (215)
T 1bqu_A 5 GLPPEKPKN-LSCIVNEGKKMRCEWDGGRETHL--ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVE 81 (215)
T ss_dssp CCCCCCCEE-EEEEEETTSCCEEEEECCSCCSS--CCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEE
T ss_pred CCCCCCCEe-eEeEECCCCcEEEEcCCCCCCCC--CceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEE
Confidence 356777776 67777777899999998776543 4799999976532211 1112344578999999 99999999999
Q ss_pred EEecCcCCCCccccCCEEcc-CCCCCCCCCCCCEEEEe--cCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEe
Q psy12426 385 AVNKIGESLPLVCQSPITAK-DPFGRPDRPGQPTVTDW--GKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACI 460 (616)
Q Consensus 385 a~n~~g~~~~~~~s~~~~~~-~~~~~p~~p~~~~~~~~--~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~ 460 (616)
|.|..|.+.. ....+. ....+|.+|.++.+... +.+++.|+|.+|...++ .+.+|+|+|+..++ .|.....
T Consensus 82 A~n~~G~~~s----~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~y~~~~~~~~~~~~~ 156 (215)
T 1bqu_A 82 AENALGKVTS----DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSV-IILKYNIQYRTKDASTWSQIPP 156 (215)
T ss_dssp EEETTEEEEC----CCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGT-SCEEEEEEEEETTCSSCEECCG
T ss_pred EEecccCccC----CcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCc-ceEEEEEEEccCCCCCceEecc
Confidence 9999998652 122221 12246788888888765 67899999998876544 69999999998865 7776532
Q ss_pred --ecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCC
Q psy12426 461 --VPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAP 510 (616)
Q Consensus 461 --~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p 510 (616)
.......++|.+|.|++.|.|+|+|.|..|.|.+|..+..+...+...+|
T Consensus 157 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~P 208 (215)
T 1bqu_A 157 EDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRP 208 (215)
T ss_dssp GGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCHH
T ss_pred ccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccccCC
Confidence 24567899999999999999999999999999988888876666554444
No 89
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.84 E-value=1.7e-18 Score=164.26 Aligned_cols=256 Identities=16% Similarity=0.194 Sum_probs=183.1
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCcccccccCCCceEecccCCCCC
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTP 172 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (616)
+.+|+...+.|.+. |.|.+.+.|++ ++..+. ....+.. .......
T Consensus 17 ~~~G~~v~l~C~~~----------------------------g~p~~~v~W~~--~~~~~~---~~~~~~~--~~~~~~~ 61 (284)
T 2rik_A 17 LALGESGTFKCHVT----------------------------GTAPIKITWAK--DNREIR---PGGNYKM--TLVENTA 61 (284)
T ss_dssp EETTCCEEEEEEEE----------------------------SSSCCEEEEEE--TTEECC---SSSSEEE--EEETTEE
T ss_pred ecCCCcEEEEEEEE----------------------------cCCCCEEEEEE--CCEECc---CCCcEEE--EEcCCEE
Confidence 45788999999988 55667899998 533222 2222221 1223456
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.|.|..|....+ ..+.+ ..+|.+.........+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 62 ~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~---~~l~V---~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~ 135 (284)
T 2rik_A 62 TLTVLKVTKGDAGQYTCYASNVAGKDSCS---AQLGV---QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK 135 (284)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEE---EEEEE---ECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEE
T ss_pred EEEEecCCcccCEEEEEEEEECCceEEEE---EEEEc---cCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEE
Confidence 89999999999999999999988763211 11222 3456665444556678999999999999999999999999
Q ss_pred CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEe
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWR 332 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~ 332 (616)
++..+....++.+........|.|.++...|.|.|+|.|.|..|.......+.+..+|.....+.......+..+.|.|.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~ 215 (284)
T 2rik_A 136 DETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECE 215 (284)
T ss_dssp TTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEE
T ss_pred CCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEE
Confidence 99998877777776666778999999999999999999999999888888999988876554443345566788999998
Q ss_pred CCCCCCCCceEEEEEEEE--e-CCCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 333 APRDDGGTDILHYVVEKM--D-METGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 333 ~~~~~~~~~i~~y~v~~~--~-~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
..... ...+.+... . ................+.|.++...+.+.|+|.|.|..|...
T Consensus 216 ~~g~p----~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 275 (284)
T 2rik_A 216 LQGTP----PFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYT 275 (284)
T ss_dssp CBSSS----CCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred EEecC----CCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCcee
Confidence 64322 222222221 0 111122222223345788999999999999999999998643
No 90
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.83 E-value=1.4e-20 Score=182.97 Aligned_cols=279 Identities=13% Similarity=0.064 Sum_probs=164.7
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeee----cCCeeeeeeCCeeeeeccceEEEeecC---CCCCceeEeeeccCCcc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGE----PVPHVDWRAGGNPLNLRPIWEKCAQTE---GDTPKGKVLDLIEGNHP 73 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~----P~p~v~W~~~~~~l~~~G~Y~C~a~n~---~~~~~~~v~~~~~~~~p 73 (616)
+|.+....+.++.+.+|++|.|.|.+.+. |.+.|.|+|++..... ..+....... .....+++..
T Consensus 13 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~-~i~~~~~~~~~~~~~~~~~r~~~------- 84 (331)
T 3u83_A 13 DPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQ-NVAIYNPSMGVSVLAPYRERVEF------- 84 (331)
T ss_dssp --------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEE-EEEEEETTTEEEECTTCTTTEEE-------
T ss_pred CCcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCc-eEEEEeccCCCCcCcccCCceEe-------
Confidence 35555667889999999999999998887 5667999996532210 0000000000 0000001110
Q ss_pred ceeeccccCCCCCceEecCcccCCeEEEEEE-EEcCCCCCCCCCCCC----cce--------eecCCC---ceee-----
Q psy12426 74 IWEKCAQTEGDTPKGKVLDLIEGNQYEFRVL-AVNKGGPGEPSDPTA----PHI--------ARAKKG---KCYH----- 132 (616)
Q Consensus 74 ~w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~-a~n~~g~~~~~~~~~----~~~--------~~~~~p---~~~~----- 132 (616)
........+|.|.++...|.|.|+|. +.|..|......... +.. +....- ..+.
T Consensus 85 -----~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~ 159 (331)
T 3u83_A 85 -----LRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTS 159 (331)
T ss_dssp -----SSCSSSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEE
T ss_pred -----cccCCCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEe
Confidence 00123456899999999999999998 445455322210000 000 000000 1121
Q ss_pred eecCcccccEEEEeeccCcccccccCCCceEecccCCC----CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEE
Q psy12426 133 LVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGD----TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI 208 (616)
Q Consensus 133 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~ 208 (616)
..|.|.+.+.|++ +. .............. ...|.|..+..+|.|.|+|.|.|..|....+ +.
T Consensus 160 ~~~~p~~~i~W~~--~~-------~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~-----~~ 225 (331)
T 3u83_A 160 ANGKPPSVVSWET--RL-------KGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKES-----LT 225 (331)
T ss_dssp EEEBSCCEEEEEE--SS-------CCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEE-----EE
T ss_pred cCCcCCceEEEEc--CC-------CCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceee-----EE
Confidence 1277888999988 31 10000010011111 1247788889999999999999987753311 22
Q ss_pred eccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCce-eEEEECCeeecccCcEEEEecCCceEEEec-CCCCCCcEE
Q psy12426 209 ARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPT-KEWLCNDITIISKDRFKIVNDDKSTKLKVF-DSKRGDSGI 286 (616)
Q Consensus 209 ~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~-~l~~~~~g~ 286 (616)
+. ...+|.+.........+..|+.+.|.|.+.+.|.+. +.|++++..+.... .. .. ..|.|. ++...|.|.
T Consensus 226 l~-V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~--~~-~~---~~L~i~~~v~~~d~G~ 298 (331)
T 3u83_A 226 LN-VQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV--EA-QN---RTLFFKGPINYSLAGT 298 (331)
T ss_dssp CC-EEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--EE-ET---TEEEECSCCCGGGCEE
T ss_pred EE-EecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc--ee-cC---cEEEEeCCCccccCeE
Confidence 11 123455544444556678899999999999999998 99999998775432 22 22 289999 899999999
Q ss_pred EEEEEEcCCCCceeeEEEEEecCCCCC
Q psy12426 287 YTLAVKNSWGTDKGTAKVTVLDIPSPP 313 (616)
Q Consensus 287 y~c~a~n~~g~~~~~~~l~v~~~p~~p 313 (616)
|+|.|.|..|.....+.|.|...+...
T Consensus 299 Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 325 (331)
T 3u83_A 299 YICEATNPIGTRSGQVEVNITEAAALE 325 (331)
T ss_dssp EEEEEEETTEEEEEEEEECCBC-----
T ss_pred EEEEEEeccccceEEEEEEEeccchhh
Confidence 999999999999888888887765543
No 91
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.83 E-value=3.3e-20 Score=176.86 Aligned_cols=259 Identities=10% Similarity=0.032 Sum_probs=162.9
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|... +.++.|.+|+.+.|.|.+.|. |+|++++.... .-..
T Consensus 4 ~P~i~~~-~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~-----~~~~--------------------------- 46 (292)
T 4dkd_C 4 IPVIEPS-VPELVVKPGATVTLRCVGNGS----VEWDGPPSPHW-----TLYS--------------------------- 46 (292)
T ss_dssp CCEEESC-CSSCEECTTCCEEEEEECSSC----CCBCCCCCSSC-----EECC---------------------------
T ss_pred CceecCC-CCeEEEcCCCcEEEEEcCCCc----eEEccCCCCce-----EEec---------------------------
Confidence 6888755 788899999999999999884 99997764211 0000
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceee-----cCCCceee------------eecCcc--ccc
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIAR-----AKKGKCYH------------LVGTLL--KDS 141 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~-----~~~p~~~~------------~~g~p~--~~~ 141 (616)
......|.|.++...|.|.|+|.|.|..|..... ..+.... ...+..+. ..+ +. +.+
T Consensus 47 -~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~--~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v 122 (292)
T 4dkd_C 47 -DGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAA--IHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGV 122 (292)
T ss_dssp -BTTEEEEEESSCCGGGCSCEEECCCC----CCEE--ECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSE
T ss_pred -cCceEEEEEcccccccCEEEEEEEccCCCCcceE--EEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeE
Confidence 1123589999999999999999999987765333 1111110 01111111 114 43 679
Q ss_pred EEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccc-cCCCceec
Q psy12426 142 IYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK-KVSPYINR 220 (616)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~-~~~P~~~~ 220 (616)
.|++ +++... ....... ......|.|.++...|.|.|+|.|.|..|..... ...+.+... ..+|.+.
T Consensus 123 ~W~~--~~~~~~---~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~--~~~l~V~~~~~~~p~i~- 190 (292)
T 4dkd_C 123 SLVR--VRGRPL---MRHTNYS----FSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSI--SIRLKVQKVIPGPPALT- 190 (292)
T ss_dssp EEEE--GGGCCC---CSSCCEE----CCSSSCCEETTCCGGGCSEEEEEECSTTSCEECC--CEEEEEECCCCSSCEEE-
T ss_pred EEEe--cCCCcc---ccCCccc----ccCCceEEECCCCHHHCeEEEEEEEeCCCceeEE--EEEEEEeCCCCCCCeEE-
Confidence 9998 533211 1111111 1122349999999999999999999876643211 222333322 2367664
Q ss_pred cCCcceEEEcCCeEEEEEEEeeecC-ceeEEEECCeeecccCcEEEEec--CCceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 221 DQLSDIKVRAGSNFEFDINVIGEPI-PTKEWLCNDITIISKDRFKIVND--DKSTKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 221 ~~~~~~~v~~g~~~~l~c~~~~~p~-~~~~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
..+....+..|+.+.|.|.+.+.|. +.+.|++++..+........... .....|.|.++...|.|.|+|.|.|..|.
T Consensus 191 ~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 270 (292)
T 4dkd_C 191 LVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGK 270 (292)
T ss_dssp EESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCE
T ss_pred ccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCC
Confidence 3344556679999999999998765 46888888876543332222211 12248999999999999999999999999
Q ss_pred ceeeEEEEEecCCCC
Q psy12426 298 DKGTAKVTVLDIPSP 312 (616)
Q Consensus 298 ~~~~~~l~v~~~p~~ 312 (616)
...++.|.|......
T Consensus 271 ~~~~~~l~V~~~~~~ 285 (292)
T 4dkd_C 271 HSTSMFFRVVESAGN 285 (292)
T ss_dssp EEEEEEECC------
T ss_pred ceeEEEEEEeeCCCc
Confidence 888888888765543
No 92
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.83 E-value=1.6e-19 Score=162.91 Aligned_cols=134 Identities=19% Similarity=0.267 Sum_probs=94.7
Q ss_pred eEEeecccC-CCeEEEEEEEEeCCCCCCCCCCCCCEEeccc----cCCCceeccCCcceEEEcCCeEEEEEEEeeecCce
Q psy12426 173 KGKVLDLIE-GNQYEFRVLAVNKGGPGEPSDPTAPHIARAK----KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPT 247 (616)
Q Consensus 173 ~l~i~~l~~-~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~----~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~ 247 (616)
.|.|.++.. .|.|.|+|.|.|..|...... ..+.+... ...|.+. ..+....+..|+.+.|.|.+.+.|.+.
T Consensus 65 ~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~--~~l~V~~~~~~~~~~p~~~-~~~~~~~~~~g~~v~l~C~~~g~p~p~ 141 (212)
T 2yd1_A 65 ILRIEPVRAGRDDAPYECVAENGVGDAVSAD--ATLTIYEGDKTPAGFPVIT-QGPGTRVIEVGHTVLMTCKAIGNPTPN 141 (212)
T ss_dssp EEEESSCCTTTTCSEEEEEEECSSSCEEEEE--EEEEEECTTCSCTTCCEEE-ECCCCEEEETTCCEEECCEEECSSCCE
T ss_pred EEEEEecCCCCcCceEEEEEEeCCCCeEEee--EEEEEecccCCCCCCCeeE-eCCCceEeecCCeEEEEEEeccCCCCe
Confidence 677778887 788888888887766521111 11222211 1125553 344667888999999999999999999
Q ss_pred eEEEECCeeeccc-CcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceee-EEEEEecCCCCC
Q psy12426 248 KEWLCNDITIISK-DRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT-AKVTVLDIPSPP 313 (616)
Q Consensus 248 ~~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~-~~l~v~~~p~~p 313 (616)
+.|++++..+... .++.+. .+ .|.|.++...|.|.|+|.|.|..|..... +.|.|...+..+
T Consensus 142 i~W~~~~~~~~~~~~~~~~~-~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~~ 205 (212)
T 2yd1_A 142 IYWIKNQTKVDMSNPRYSLK-DG---FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRVGT 205 (212)
T ss_dssp EEEEETTEECCTTSTTEEEE-TT---EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C-
T ss_pred EEEEECCeEcccCCCeEEcc-CC---eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccccc
Confidence 9999999988653 444333 33 89999999999999999999999987654 788887765443
No 93
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.82 E-value=3.9e-19 Score=160.38 Aligned_cols=134 Identities=19% Similarity=0.193 Sum_probs=90.3
Q ss_pred eEEeecc-cCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccc----cCCCceeccCCcceEEEcCCeEEEEEEEeeecCce
Q psy12426 173 KGKVLDL-IEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK----KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPT 247 (616)
Q Consensus 173 ~l~i~~l-~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~----~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~ 247 (616)
.|.|.++ ...|.|.|+|.|.|..|....+ ..+.+... ...|.+. ..+....+..|+.+.|.|.+.+.|.+.
T Consensus 64 ~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~---~~l~V~~~~~~~~~~p~~~-~~~~~~~~~~g~~v~l~C~~~g~p~p~ 139 (212)
T 2yd6_A 64 VLRIQPLRTPRDEAIYECVASNNVGEISVS---TRLTVLREDQIPRGFPTID-MGPQLKVVERTRTATMLCAASGNPDPE 139 (212)
T ss_dssp EEEECSCCTTTTCEEEEEEEEETTEEEEEE---EEEEEECGGGCCTTCCEEE-ECCCCEEEETTSCEEEEEEEECSSCCE
T ss_pred EEEEeccCCCCCCeEEEEEEEcCCCcEEEE---EEEEEeccCccCCCcceee-cCCcceeEecCCCEEEEEEecCCCCCe
Confidence 4566666 3666666666666665542111 11222111 1224442 334567788999999999999999999
Q ss_pred eEEEECCeeeccc---CcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eeeEEEEEecCC
Q psy12426 248 KEWLCNDITIISK---DRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAKVTVLDIP 310 (616)
Q Consensus 248 ~~W~~~~~~~~~~---~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~l~v~~~p 310 (616)
+.|++++..+... .++.....+....|.|.++...|.|.|+|.|.|..|.. ...+.+.+...+
T Consensus 140 v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 140 ITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp EEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 9999999987653 45555555566799999999999999999999999976 445666665443
No 94
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.82 E-value=4.8e-19 Score=157.89 Aligned_cols=187 Identities=21% Similarity=0.406 Sum_probs=134.1
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|.. .+.++.+.+|+.+.|.|.+.|.|.|.|.|+|++..+.....|....
T Consensus 7 ~P~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~--------------------------- 58 (197)
T 3lcy_A 7 APGIRK-EMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSS--------------------------- 58 (197)
T ss_dssp EEEEEE-CCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEE---------------------------
T ss_pred CCcccc-cCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEe---------------------------
Confidence 466764 4889999999999999999999999999999998776444433221
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCcccccccCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHLCPI 160 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~ 160 (616)
......|.|.++...|.|.|.|.|.|..|
T Consensus 59 -~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~-------------------------------------------------- 87 (197)
T 3lcy_A 59 -DGRTHTLTVMTEEQEDEGVYTCIATNEVG-------------------------------------------------- 87 (197)
T ss_dssp -SSSEEEEEEECCSGGGCEEEEEEEECSSC--------------------------------------------------
T ss_pred -CCCEEEEEEecCCccCCEEEEEEEECCCC--------------------------------------------------
Confidence 01122566666666666666666654332
Q ss_pred ceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCcee--ccCCcceEEEcCCeEEEEE
Q psy12426 161 WEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYIN--RDQLSDIKVRAGSNFEFDI 238 (616)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~--~~~~~~~~v~~g~~~~l~c 238 (616)
..... ..+.+. .+|.+. ........+..|+.+.|.|
T Consensus 88 ------------------------------------~~~~~---~~l~v~---~~p~~~~~~~~~~~~~~~~g~~~~l~C 125 (197)
T 3lcy_A 88 ------------------------------------EVETS---SKLLLQ---ATPQFHPGYPLKEKYYGAVGSTLRLHV 125 (197)
T ss_dssp ------------------------------------EEEEE---EEEEEE---EEEEECTTSCCCSEEEEETTSCEEEEE
T ss_pred ------------------------------------ceeEE---EEEEEE---cCCCCCCCccCCcceeecCCCeEEEEE
Confidence 21100 000000 001110 1112446678999999999
Q ss_pred EEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCC-CCcEEEEEEEEcCCCCceeeEEEEEec
Q psy12426 239 NVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKR-GDSGIYTLAVKNSWGTDKGTAKVTVLD 308 (616)
Q Consensus 239 ~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~-~~~g~y~c~a~n~~g~~~~~~~l~v~~ 308 (616)
.+.+.|.+.+.|++++..+....++.+...+....|.|.++.. .|.|.|+|.|.|..|.....+.+.+.+
T Consensus 126 ~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 126 MYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 9999999999999999999888888887777778999999995 799999999999999988888887764
No 95
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.82 E-value=7.2e-19 Score=154.87 Aligned_cols=172 Identities=23% Similarity=0.318 Sum_probs=130.4
Q ss_pred ecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEc-cccccceEEeccccCCCeEEEEEEE
Q psy12426 307 LDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPM-GDVSGTYTRAENLIEGHDYNFRVKA 385 (616)
Q Consensus 307 ~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~-~~~~~~~~~i~~L~~~~~y~~~v~a 385 (616)
...|.+|.+ +.+.....+++.|+|.++. ..+.+|.|+++..++ .+... .......+.+.+|.+++.|.|+|.|
T Consensus 4 ~t~p~~P~~-l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 77 (186)
T 1qr4_A 4 GTDLDNPKD-LEVSDPTETTLSLRWRRPV----AKFDRYRLTYVSPSG-KKNEMEIPVDSTSFILRGLDAGTEYTISLVA 77 (186)
T ss_dssp ----CCCEE-EEEESCCSSEEEEEEECCS----SCCSEEEEEEECTTC-CEEEEEECTTCSEEEEESCCSSCEEEEEEEE
T ss_pred cCCCcCCCc-eEEEecCCCEEEEEEeCCC----CCccEEEEEEEeCCC-CeeEEECCCCCCEEEECCCCCCCEEEEEEEE
Confidence 456777776 7778888999999999763 267899999985433 33222 2345678999999999999999999
Q ss_pred EecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCc
Q psy12426 386 VNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANI 465 (616)
Q Consensus 386 ~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~ 465 (616)
.|..|.+.+ ..+.+. ..|.+|.++.+...+.+++.|+|.+|. +.+.+|.|+|+..++.........+..
T Consensus 78 ~~~~~~s~~----~~~~~~---t~p~~P~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~~~~~~ 146 (186)
T 1qr4_A 78 EKGRHKSKP----TTIKGS---TVVGSPKGISFSDITENSATVSWTPPR----SRVDSYRVSYVPITGGTPNVVTVDGSK 146 (186)
T ss_dssp ESSSCBCCC----EEEEEE---CCCCCCSCEEEESCCSSCEEEEECCCS----SCCSEEEEEEEETTCCCCEEEEEETTC
T ss_pred EcCCccCCC----EEEEEE---CCCCCCCccEEEEeCCCEEEEEEECCC----CcccEEEEEEEeCCCCCceEEEcCCCc
Confidence 997665543 223333 347888899999999999999999764 258999999988765323334455678
Q ss_pred cEEEcCCCCCCCeEEEEEEEEcCCCCCCCC
Q psy12426 466 TATSVPDLKEGEEYEFRVIAVNKGGPGEPS 495 (616)
Q Consensus 466 ~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s 495 (616)
..++|.+|.|++.|.|+|+|.|..|.|++.
T Consensus 147 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 176 (186)
T 1qr4_A 147 TRTKLVKLVPGVDYNVNIISVKGFEESEPI 176 (186)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECCCE
T ss_pred CEEEEcCCCCCCEEEEEEEEEcCCCcCcCE
Confidence 899999999999999999999999987643
No 96
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.81 E-value=3e-19 Score=177.33 Aligned_cols=297 Identities=13% Similarity=0.034 Sum_probs=188.3
Q ss_pred eeeccccCC---------CCCceEecCccc-CCeEEEEEEEEcCCCCCCCCCCCCcceeec----CCCce--------ee
Q psy12426 75 WEKCAQTEG---------DTPKGKVLDLIE-GNQYEFRVLAVNKGGPGEPSDPTAPHIARA----KKGKC--------YH 132 (616)
Q Consensus 75 w~~~~~~~~---------~~~~l~i~~l~~-~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~----~~p~~--------~~ 132 (616)
|.+++.... ....|.|.++.. .|+|.|+|.|.|..|............... ..+.. +.
T Consensus 41 W~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~ 120 (382)
T 1cs6_A 41 WKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVM 120 (382)
T ss_dssp EEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEE
T ss_pred EEECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEE
Confidence 888776532 135688888886 999999999999888543211000000000 00111 11
Q ss_pred e-----ecCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCC--CCC
Q psy12426 133 L-----VGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSD--PTA 205 (616)
Q Consensus 133 ~-----~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~--~~~ 205 (616)
+ .+.|...+.|++ ++.... ....... ........|.|.+++.+|.|.|+|.|.|..|...... ...
T Consensus 121 l~C~~~~~~p~~~i~W~~--~~~~~~-~~~~~~~----~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~ 193 (382)
T 1cs6_A 121 FTCSPPPHYPALSYRWLL--NEFPNF-IPADGRR----FVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFS 193 (382)
T ss_dssp ECCCCCSEESCCEEEEEE--SSTTCB-CCCCSSE----EECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCE
T ss_pred EEeCCCCCCCCcEEEEEE--CCCccc-cccCceE----EEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccce
Confidence 1 145677899998 532211 0011111 1123345899999999999999999999875422110 011
Q ss_pred CEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCC
Q psy12426 206 PHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRG 282 (616)
Q Consensus 206 ~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~ 282 (616)
.+.+.. ...+|.+....+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ........|.|.++...
T Consensus 194 ~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~------~~~~~~~~L~i~~~~~~ 267 (382)
T 1cs6_A 194 QLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS------KWLSSEPLLHIQNVDFE 267 (382)
T ss_dssp EEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSC------CCSBSSSEEEECSCCGG
T ss_pred eeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCccccc------EEecCCcEEEEccCChh
Confidence 122111 122465555556678899999999999999999999999998876542 11223458999999999
Q ss_pred CcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC----CCEE
Q psy12426 283 DSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET----GRWV 358 (616)
Q Consensus 283 ~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~----~~~~ 358 (616)
|.|.|+|.|.|..|.......+.+..+|.....+.......+..+.|.|...... ... +.|...+. ....
T Consensus 268 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p----~p~--v~W~~~g~~~~~~~~~ 341 (382)
T 1cs6_A 268 DEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKP----RPA--VRWLRDGQPLASQNRI 341 (382)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEES----CCE--EEEEETTEECCCCSSE
T ss_pred hCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeec----CCE--EEEEECCEECCCCceE
Confidence 9999999999999988888888887766533322233445677889998753221 112 22322111 0000
Q ss_pred EccccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 359 PMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 359 ~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
. .....+.|.++...+.+.|+|.|.|..|...
T Consensus 342 ~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 373 (382)
T 1cs6_A 342 E---VSGGELRFSKLVLEDSGMYQCVAENKHGTVY 373 (382)
T ss_dssp E---EETTEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred E---EECCEEEECcCCcccCEEEEEEEEeCCCeEE
Confidence 0 1234789999999999999999999998753
No 97
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.81 E-value=1.1e-18 Score=155.18 Aligned_cols=121 Identities=17% Similarity=0.230 Sum_probs=90.5
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc-eeEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP-TKEWL 251 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~-~~~W~ 251 (616)
.|.|.+++..|.|.|+|.|.|..|...... ..+.+ ..+|.+. ..+....+..|+.+.|.|.+.+.|.+ .+.|+
T Consensus 69 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~--~~l~V---~~~p~~~-~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~ 142 (195)
T 2c5d_C 69 QLRITSLQLSDTGQYQCLVFLGHQTFVSQP--GYVGL---EGLPYFL-EEPEDRTVAANTPFNLSCQAQGPPEPVDLLWL 142 (195)
T ss_dssp EEEESSCCSTTCEEEEEEEEETTEEEECCC--EEEEE---CCSCEEE-ECCCCEEECTTCCEEEEEEEECSSCCCEEEEE
T ss_pred EEEEEeccccCCcEEEEEEEeCCCceeccc--EEEEE---ecCCeEE-cCCCcEEEcCCCEEEEEeECCCCCCCCEEEEE
Confidence 677888888888888888888765422111 11222 2446553 34556788999999999999999999 99999
Q ss_pred ECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCce-eeEEEEE
Q psy12426 252 CNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK-GTAKVTV 306 (616)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~-~~~~l~v 306 (616)
+++..+...... .....|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 143 ~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 143 QDAVPLATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp ESSCBSSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ECCEeccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 999887654432 344589999998 78999999999999874 6777777
No 98
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.80 E-value=1.5e-18 Score=154.91 Aligned_cols=172 Identities=25% Similarity=0.389 Sum_probs=131.8
Q ss_pred CCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEE--ccccccceEEeccccCCCeEEEEEEEE
Q psy12426 309 IPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVP--MGDVSGTYTRAENLIEGHDYNFRVKAV 386 (616)
Q Consensus 309 ~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L~~~~~y~~~v~a~ 386 (616)
.| +|.+ +.+.....+++.|+|.++. +..+.+|.|+++..+...+.. ........+.+.+|.+++.|.|+|.|.
T Consensus 23 ~P-~P~~-l~~~~~~~~sv~lsW~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 97 (203)
T 2gee_A 23 VP-QPTD-LSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTV 97 (203)
T ss_dssp CC-CCEE-EEEECCTTTCEEEEEECCS---SSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred Cc-CCCc-cEEEecCCCEEEEEecCCC---CCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEE
Confidence 44 4544 6777788999999999765 247899999998765443221 122456789999999999999999999
Q ss_pred ecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCc
Q psy12426 387 NKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANI 465 (616)
Q Consensus 387 n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~ 465 (616)
|..|.+.+. .+.+...+| +|.++.+...+.+++.|+|.+|. + +.+.+|.|+|+..++ ............
T Consensus 98 ~~~g~s~~~------~~~t~~~~p-~P~~l~~~~~~~~sv~l~W~~p~--~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~ 167 (203)
T 2gee_A 98 KNGGESTPT------TLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPP--S-IDLTNFLVRYSPVKNEEDVAELSISPSD 167 (203)
T ss_dssp SSSCBCCCE------EEEEECCCC-CCEEEEEEEEETTEEEEEEECCS--S-CCCSEEEEEEEETTCGGGCEEEEECTTC
T ss_pred eCCCccccE------eeeecCCCc-CCCceEEEEcCCCEEEEEEcCCC--C-CCccEEEEEEEECCCCCccEEEEcCCCc
Confidence 988876543 222222344 78899999999999999999874 2 369999999998654 222334556778
Q ss_pred cEEEcCCCCCCCeEEEEEEEEcCCCCCCCC
Q psy12426 466 TATSVPDLKEGEEYEFRVIAVNKGGPGEPS 495 (616)
Q Consensus 466 ~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s 495 (616)
..++|.+|.|++.|.|+|+|.|..|.|+++
T Consensus 168 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 197 (203)
T 2gee_A 168 NAVVLTNLLPGTEYVVSVSSVYEQHESTPL 197 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred CEEEECCCCCCCEEEEEEEEecCCCcCCCe
Confidence 999999999999999999999999998764
No 99
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.80 E-value=2.6e-18 Score=152.05 Aligned_cols=85 Identities=24% Similarity=0.328 Sum_probs=72.1
Q ss_pred CcceEEEcCCeEEEEEEEeeecCceeEEEE--CCeeec---ccCcEEEEecCCceEEEecCCC-CCCcEEEEEEEEcCCC
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEPIPTKEWLC--NDITII---SKDRFKIVNDDKSTKLKVFDSK-RGDSGIYTLAVKNSWG 296 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~--~~~~~~---~~~~~~~~~~~~~~~l~i~~l~-~~~~g~y~c~a~n~~g 296 (616)
+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+. ...++.+...+....|.|.++. ..|.|.|+|.|.|..|
T Consensus 99 ~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g 178 (190)
T 2wv3_A 99 KRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIG 178 (190)
T ss_dssp CSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSC
T ss_pred CCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCC
Confidence 345678899999999999999999999999 777654 4567777776667799999999 7999999999999999
Q ss_pred CceeeEEEEEe
Q psy12426 297 TDKGTAKVTVL 307 (616)
Q Consensus 297 ~~~~~~~l~v~ 307 (616)
....++.|.|.
T Consensus 179 ~~~~~~~l~V~ 189 (190)
T 2wv3_A 179 SASVSTVLRVR 189 (190)
T ss_dssp EEEEEEEEEEE
T ss_pred cceeEEEEEEE
Confidence 88888777764
No 100
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.80 E-value=3e-19 Score=158.47 Aligned_cols=85 Identities=22% Similarity=0.440 Sum_probs=70.3
Q ss_pred CcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eee
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGT 301 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~ 301 (616)
+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+ .|.|.++...|.|.|+|.|.|..|.. ...
T Consensus 107 ~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~ 183 (192)
T 2iep_A 107 PINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKL 183 (192)
T ss_dssp CCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCC
T ss_pred CcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEE
Confidence 34577889999999999999999999999999988777766654443 79999999999999999999998877 456
Q ss_pred EEEEEecCC
Q psy12426 302 AKVTVLDIP 310 (616)
Q Consensus 302 ~~l~v~~~p 310 (616)
+.|.|..+|
T Consensus 184 ~~l~V~~pp 192 (192)
T 2iep_A 184 VKLEVEVFA 192 (192)
T ss_dssp EEEEEEC--
T ss_pred EEEEEEeCC
Confidence 777776543
No 101
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.80 E-value=5e-19 Score=157.97 Aligned_cols=175 Identities=18% Similarity=0.287 Sum_probs=128.4
Q ss_pred CCCCccceeec--CCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-CCEEEcc-ccccceEEeccccCCCeEEEEEEEEec
Q psy12426 313 PEGPLKPSNIT--KSSCNLEWRAPRDDGGTDILHYVVEKMDMET-GRWVPMG-DVSGTYTRAENLIEGHDYNFRVKAVNK 388 (616)
Q Consensus 313 p~~~~~~~~~~--~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~-~~~~~~~-~~~~~~~~i~~L~~~~~y~~~v~a~n~ 388 (616)
|.+ +.+..+. .+++.|+|.+| .+..+.+|.|+++.... ..|.... ......+.+.+|.+++.|.|+|.|.|.
T Consensus 3 P~~-l~v~~v~~~~~si~l~W~~p---~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~ 78 (201)
T 2ha1_A 3 PVE-VFITETPSQPNSHPIQWNAP---QPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQ 78 (201)
T ss_dssp CCE-EECCSCSCCSSCEEEEEECC---SSTTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECT
T ss_pred cee-EEEEecCCCCCEEEEEEeCC---CCCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEec
Confidence 444 5566666 88999999987 34589999999987543 4455443 244678999999999999999999999
Q ss_pred CcCCCCccc-------cCCEEccCCCCCCCCC-----CCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-Cc
Q psy12426 389 IGESLPLVC-------QSPITAKDPFGRPDRP-----GQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PW 455 (616)
Q Consensus 389 ~g~~~~~~~-------s~~~~~~~~~~~p~~p-----~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~ 455 (616)
.|.+..+.. +......+....|.+| .++.+..++.+++.|+|.+|. +.+.+|.|+|+..+. .|
T Consensus 79 ~G~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~ 154 (201)
T 2ha1_A 79 YGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSAS----DTVSGFRVEYELSEEGDE 154 (201)
T ss_dssp TSCEEEEEEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCSC----TTEEEEEEEEEETTTCCC
T ss_pred ccccCceeEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCCC----CCccEEEEEEEECCCCCc
Confidence 998764210 0000001111112222 466888889999999999873 269999999997643 55
Q ss_pred eEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCC
Q psy12426 456 EKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPS 495 (616)
Q Consensus 456 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s 495 (616)
.....+.+....++|.+|.|++.|.|+|+|.|..|.|++.
T Consensus 155 ~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~ 194 (201)
T 2ha1_A 155 PQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLI 194 (201)
T ss_dssp CEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEE
T ss_pred eeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccE
Confidence 5555667778999999999999999999999999988754
No 102
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.80 E-value=1.2e-18 Score=155.61 Aligned_cols=88 Identities=19% Similarity=0.271 Sum_probs=71.5
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeee-cCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGE-PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
+|.|.... ...+.+|+.+.|.|.+.+. |.|.+.|++++..+..+.++. ...+...|.|.++...|.|.|+|.|.|
T Consensus 117 ~P~~~~~~--~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N 192 (207)
T 3rbs_A 117 GPHFVEYL--SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKD 192 (207)
T ss_dssp SSEEEEEE--EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCC--CSSEEEEEEETTCCGGGCEEEEEEEEE
T ss_pred CCceEecC--CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceE--cCCCEEEEEECCCCcccCEEEEEEEEc
Confidence 56664332 4778999999999999999 999999999999987655542 223345799999999999999999999
Q ss_pred CCCCceeeEEEEE
Q psy12426 294 SWGTDKGTAKVTV 306 (616)
Q Consensus 294 ~~g~~~~~~~l~v 306 (616)
..|....++.|+.
T Consensus 193 ~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 193 DRGKDKSRLKLVD 205 (207)
T ss_dssp TTEEEEEEEEECC
T ss_pred CCCEEEEEEEEec
Confidence 9998888777654
No 103
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.80 E-value=1.9e-18 Score=169.30 Aligned_cols=266 Identities=13% Similarity=0.114 Sum_probs=149.7
Q ss_pred CcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeec-CCeEEEEEeCCCC-C-CCCceEEEEEEEEeCCCCCEEE
Q psy12426 283 DSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNIT-KSSCNLEWRAPRD-D-GGTDILHYVVEKMDMETGRWVP 359 (616)
Q Consensus 283 ~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~-~~~~~l~W~~~~~-~-~~~~i~~y~v~~~~~~~~~~~~ 359 (616)
..|.+++.+.+..|....... ...|.+|.+ +.+.... ...+.|+|+++.. + .+..+..|.++++..+...|..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~---~v~~~pP~n-l~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~~ 83 (380)
T 3lb6_C 8 VGCLYTFLISTTFGCTSSSDT---EIKVNPPQD-FEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKT 83 (380)
T ss_dssp --------------------------CCCCCEE-EEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCEE
T ss_pred hhhhhhheeecccccccCCcc---cccCCcCCc-eEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcceE
Confidence 356667777776664422111 124677776 6666555 5889999998765 2 2346899999999877777887
Q ss_pred ccccccceEEeccccCCCeEEEEEEEEec----CcCCCCccccCCEEccCC-CCCCCCCCCCEEEEecCCeEEEEecCCC
Q psy12426 360 MGDVSGTYTRAENLIEGHDYNFRVKAVNK----IGESLPLVCQSPITAKDP-FGRPDRPGQPTVTDWGKDHVDLEWTPPK 434 (616)
Q Consensus 360 ~~~~~~~~~~i~~L~~~~~y~~~v~a~n~----~g~~~~~~~s~~~~~~~~-~~~p~~p~~~~~~~~~~~~v~l~W~~p~ 434 (616)
....... ....+..+..|+|+|+|.|. .|.|.++.++..+..... ..+|.+|.++.+...+.+.+.++|+++.
T Consensus 84 ~~~~~~~--~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~p~~ 161 (380)
T 3lb6_C 84 IITKNLH--YKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGI 161 (380)
T ss_dssp EEESSSE--EEEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEECC-
T ss_pred EEeccEE--EEEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEcCCC
Confidence 6554332 23344558899999999976 677776655655554444 3556788899998889999999999754
Q ss_pred CCCCCcceeEEEEEeeCCC-CceEe---EeecCCccEEEcC--CCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcC
Q psy12426 435 KDGGSPISQYIIEKKPKYG-PWEKA---CIVPANITATSVP--DLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFV 508 (616)
Q Consensus 435 ~~~~~~i~~Y~i~~~~~~~-~~~~~---~~~~~~~~~~~l~--~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~ 508 (616)
. . .....|.|+|+..+. .+... ....+....+.+. ++.+.+.|.|+|.|.|..|.+..+. ......
T Consensus 162 ~-~-~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~~----~~~~~~-- 233 (380)
T 3lb6_C 162 G-V-LLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSSY----FTFQLQ-- 233 (380)
T ss_dssp -------CCEEEEEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CCCEE----EEECGG--
T ss_pred C-C-CCCccEEEEEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeecccc----EEEcHH--
Confidence 3 2 246789999987654 33333 1122334456665 5688899999999999988765321 111110
Q ss_pred CCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCCCCCCCCce
Q psy12426 509 APVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQPISNGGSAI 588 (616)
Q Consensus 509 ~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p~~~~~~~i 588 (616)
....|+||.++++...+.+++.|+|++|.....+.+
T Consensus 234 --------------------------------------------~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~~~~~~~ 269 (380)
T 3lb6_C 234 --------------------------------------------NIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARC 269 (380)
T ss_dssp --------------------------------------------GSCCCCCCEEEEEC-------CEEEECCSSSCCSTT
T ss_pred --------------------------------------------HcccCCCCceEEEEEcCCCeEEEEECCCCCCCCcce
Confidence 013478888888877778899999999865434678
Q ss_pred eeeEEEEeecCCCCeEEcc
Q psy12426 589 KGYEVERRERTSGRWIKIT 607 (616)
Q Consensus 589 ~~Y~i~~~~~~~~~w~~~~ 607 (616)
.+|+|+|++. +..|....
T Consensus 270 l~Yev~y~~~-~~~w~~~~ 287 (380)
T 3lb6_C 270 FDYEIEIRED-DTTLVTAT 287 (380)
T ss_dssp EEEEECC---------CCE
T ss_pred EEEEEEEEeC-CCCceEec
Confidence 9999999974 56787543
No 104
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.80 E-value=1.6e-18 Score=172.94 Aligned_cols=265 Identities=14% Similarity=0.048 Sum_probs=144.0
Q ss_pred ceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEE----ecCCCCCCCCccceeecCCeEEEEEeCCCCCCC------C
Q psy12426 271 STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV----LDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGG------T 340 (616)
Q Consensus 271 ~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v----~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~------~ 340 (616)
...++..++.+...|.+++.|.| .+.+..+....+ .....+|. +.+.. ..+++.|+|. |...++ .
T Consensus 64 ~~~~t~~~l~~~~~Y~~rV~A~n-~~~S~~s~~~~~~~~~~~~~~pP~--v~~~~-~~~si~v~w~-P~~~~g~~~~~~~ 138 (414)
T 3se4_A 64 KCNFSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPE--VHLEA-EDKAIVIHIS-PGTKDSVMWALDG 138 (414)
T ss_dssp CEECCSSCCCTTSCEEEEEEEEE-TTEEEEEECCCBCHHHHCCCCCCE--EEEEE-CSSCEEEEEE-CSSSSCTTTGGGG
T ss_pred EEECCcccccCCCcEEEEEEEee-CCcCCCEecCceeecccceeCCCe--EEEEE-cCCEEEEEEE-cCCCCCceeeeec
Confidence 34566667889999999999999 443322211111 12233443 44443 4568999999 653322 3
Q ss_pred ceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEec--CcCCCCccccCCEEccCCCC-CCCCCCCCE
Q psy12426 341 DILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNK--IGESLPLVCQSPITAKDPFG-RPDRPGQPT 417 (616)
Q Consensus 341 ~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~--~g~~~~~~~s~~~~~~~~~~-~p~~p~~~~ 417 (616)
.+..|.|.|+..+....... ......+.|.+|.+++.|.|+|+|.|. .|.|..+ ....+.+... ++.+|.++.
T Consensus 139 ~~~~Y~v~y~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S---~~~~~~t~~~~~~~~P~~v~ 214 (414)
T 3se4_A 139 LSFTYSLVIWKNSSGVEERI-ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYS---PVHCIKTTVENELPPPENIE 214 (414)
T ss_dssp SSCEEEEEEEETTTCCEEEE-EEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEEC---CCEEEECCSCCSSCCCEEEE
T ss_pred CcEEEEEEEEECCCCceEEE-ecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccC---cccccccccccccCCCCccE
Confidence 57899999987665553332 234567999999999999999999994 5666554 3334444333 445677888
Q ss_pred EEEecCCeEEEEecCCCCCCCCcceeEEEEEeeC--------CC-CceEeEee-cCCccEEEcC-CCCCCCeEEEEEEEE
Q psy12426 418 VTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPK--------YG-PWEKACIV-PANITATSVP-DLKEGEEYEFRVIAV 486 (616)
Q Consensus 418 ~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~--------~~-~~~~~~~~-~~~~~~~~l~-~L~p~t~Y~~~v~a~ 486 (616)
+...+ .++.|.|.+|.. ..+|.|+|+.. +. .|...... ......+.|+ +|.+++.|.|||+|.
T Consensus 215 ~~~~~-~~~~l~W~pp~~-----~~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~ 288 (414)
T 3se4_A 215 VSVQN-QNYVLKWDYTYA-----NMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQAS 288 (414)
T ss_dssp EEEET-TEEEEEEECSSS-----SCEEEEEEEESGGGSCCCC--CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEE
T ss_pred EEEec-CCeEEEECCCCC-----CeEEEEEEEehhccccccccccCceECCCccCCCCCEEcCCcccccCccEEEEEEEe
Confidence 77665 679999997532 34899999863 12 56643211 1234566665 699999999999999
Q ss_pred cCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEE
Q psy12426 487 NKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEAT 566 (616)
Q Consensus 487 n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~ 566 (616)
|..|.|++|....+.+.. ..++.+|. +++.
T Consensus 289 n~~g~s~~s~~~~~~t~~-------------------------------------------------~~~~~pP~-l~~~ 318 (414)
T 3se4_A 289 DGNNTSFWSEEIKFDTEI-------------------------------------------------QAFLLPPV-FNIR 318 (414)
T ss_dssp CSSSEEEECCCEEEETTC-------------------------------------------------C------------
T ss_pred cCCCcccccccccccchh-------------------------------------------------ccccCCCe-EEEE
Confidence 999999888643322111 12456776 7666
Q ss_pred eecCCcEEEEeeCCCCCC-----CCceeeeEEEEeecCCC
Q psy12426 567 DVDKDHIKIKWQQPISNG-----GSAIKGYEVERRERTSG 601 (616)
Q Consensus 567 ~~~~~~i~l~W~~p~~~~-----~~~i~~Y~i~~~~~~~~ 601 (616)
. ..++|.|+|.+|.... ++.+.+|.|.|++.+..
T Consensus 319 ~-~~~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~~ 357 (414)
T 3se4_A 319 S-LSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSN 357 (414)
T ss_dssp ----------------------------------------
T ss_pred E-CCCeEEEEEECCCCccccchhhcCCeEEEEEEEECCCC
Confidence 4 4589999999987542 24789999999866543
No 105
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.79 E-value=1.3e-18 Score=156.99 Aligned_cols=135 Identities=21% Similarity=0.235 Sum_probs=95.8
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE-eeecCceeEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKEWL 251 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~-~~~p~~~~~W~ 251 (616)
.+.|.++...|.|.|+|.|.|..|...... +.+.....+|.+ ...+....+..|+.+.|.|.+ .+.|.+.+.|+
T Consensus 73 ~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~----~~l~V~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~ 147 (212)
T 2v9r_A 73 RIVHGRKSRPDEGVYVCVARNYLGEAVSHD----ASLEVAILRDDF-RQNPSDVMVAVGEPAVMECQPPRGHPEPTISWK 147 (212)
T ss_dssp SCCCCSSCCCSCEEEEEEEEETTEEEECCC----EEEEECEECSSC-SBCCCCEEEETTSCEEEECBCCCEESCCEEEEE
T ss_pred EEEecCCCcccCeEEEEEEECCCCceeecc----eEEEEEeccccc-eeCCCceEecCCCcEEEEEecCCCCCCCEEEEE
Confidence 345677889999999999999877532211 222222223333 334566789999999999998 89999999999
Q ss_pred ECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCcee-eEEEEEecCCCCCCC
Q psy12426 252 CNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG-TAKVTVLDIPSPPEG 315 (616)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~-~~~l~v~~~p~~p~~ 315 (616)
+++..+...........+ .|.|.++...|.|.|+|.|.|..|.... .+.|.|..+|.....
T Consensus 148 ~~~~~l~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~ 209 (212)
T 2v9r_A 148 KDGSPLDDKDERITIRGG---KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKA 209 (212)
T ss_dssp ETTEEECTTSTTEEEETT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-------
T ss_pred ECCccCCCCcceEEccCC---eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhhh
Confidence 999988754433222333 8999999999999999999999887654 478888887765443
No 106
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.79 E-value=4.3e-19 Score=166.25 Aligned_cols=223 Identities=16% Similarity=0.079 Sum_probs=146.5
Q ss_pred eEecCCCeEEEEEEEee-ecCC--eeeeeeCCeeeee---------------------cc--ceEEEeecCCCCCceeEe
Q psy12426 12 IKLSAGTTLKFDANIIG-EPVP--HVDWRAGGNPLNL---------------------RP--IWEKCAQTEGDTPKGKVL 65 (616)
Q Consensus 12 ~~v~~g~~v~l~C~~~g-~P~p--~v~W~~~~~~l~~---------------------~G--~Y~C~a~n~~~~~~~~v~ 65 (616)
..|.+|+.++|.|.+.| .|.| .|+|+|+|..+.. +| .|+|.|.|..+.....+.
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~ 92 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQT 92 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEE
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEE
Confidence 47899999999999998 8888 9999999976521 45 599999998655322111
Q ss_pred -eeccCCccceeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEE
Q psy12426 66 -DLIEGNHPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYE 144 (616)
Q Consensus 66 -~~~~~~~p~w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~ 144 (616)
.+.....|.. ...-..+.+|+...+.|.+. |.+.+.|
T Consensus 93 l~V~~~p~p~~-----------~~~~~~v~~G~~v~l~C~~~------------------------------p~~~i~W- 130 (265)
T 2oz4_A 93 VTIYSFPAPNV-----------ILTKPEVSEGTEVTVKCEAH------------------------------PRAKVTL- 130 (265)
T ss_dssp EEEECCCCCEE-----------EESCSEEETTCEEEEEEECC------------------------------TTSEEEE-
T ss_pred EEEeCCCCcee-----------ecCCceecCCCcEEEEEEcc------------------------------CCCEEEE-
Confidence 1111000111 01111245688888888864 2345777
Q ss_pred EeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCC-CCCCCCCCCCCEEeccccCCCcee-ccC
Q psy12426 145 QLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKG-GPGEPSDPTAPHIARAKKVSPYIN-RDQ 222 (616)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~-g~~~~s~~~~~~~~~~~~~~P~~~-~~~ 222 (616)
. . ..+ ...+....|.|..+..+|.|.|+|.|.|.. |..........+.+ ..+|.+. ...
T Consensus 131 ~--g-~~~-------------~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V---~~~p~~~~~~~ 191 (265)
T 2oz4_A 131 N--G-VPA-------------QPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRV---LYGPRLDERDC 191 (265)
T ss_dssp S--S-CSS-------------SCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEE---EEEEECCGGGS
T ss_pred C--C-EEc-------------cCCCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEE---EeCCccccccC
Confidence 3 2 111 011223467899999999999999998654 54321111111222 2334443 223
Q ss_pred CcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeE
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 302 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~ 302 (616)
+....+.+|+.+.|.|.+.|.|.+.+.|++++..+... + .+ ..+...|.|.|+|.|.|..|.....+
T Consensus 192 p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~--------g---~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~ 258 (265)
T 2oz4_A 192 PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPI--------G---ES--VTVTRDLEGTYLCRARSTQGEVTREV 258 (265)
T ss_dssp CSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCT--------T---SC--EECCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCC--------C---cE--EEeehhhCeEEEEEEECCCCcEEEEE
Confidence 45678999999999999999999999999998732221 1 11 23777999999999999999988888
Q ss_pred EEEEec
Q psy12426 303 KVTVLD 308 (616)
Q Consensus 303 ~l~v~~ 308 (616)
.|.|..
T Consensus 259 ~l~V~~ 264 (265)
T 2oz4_A 259 TVNVLS 264 (265)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 888764
No 107
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.79 E-value=3.7e-19 Score=169.15 Aligned_cols=227 Identities=14% Similarity=0.152 Sum_probs=139.7
Q ss_pred CCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEcc---ccccceEEe--ccccCCCeEEEEEEE
Q psy12426 311 SPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMG---DVSGTYTRA--ENLIEGHDYNFRVKA 385 (616)
Q Consensus 311 ~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~---~~~~~~~~i--~~L~~~~~y~~~v~a 385 (616)
.+|.+ +.+... ...+.|+|+++... ...+. |.|+++..+...|.... ......+.+ ..|.++..|.|||+|
T Consensus 5 ~~P~n-v~~~~~-n~~~iL~W~pp~~~-~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A 80 (306)
T 3s98_A 5 KSPQK-VEVDII-DDNFILRWNRSDES-VGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA 80 (306)
T ss_dssp ---CC-CEEEEE-TTEEEEECC---------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEE
T ss_pred CCCcE-eEEEEE-CCeEEEEEcCCCCC-CCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEE
Confidence 35665 666654 55688999987643 34565 99999987777887652 233444555 456899999999999
Q ss_pred EecCcCCCCccccCCEEccCCC-CCCCCCCCCEEEEecCCeEEEEecCCCCCC-----CCcceeEEEEEeeCCC--CceE
Q psy12426 386 VNKIGESLPLVCQSPITAKDPF-GRPDRPGQPTVTDWGKDHVDLEWTPPKKDG-----GSPISQYIIEKKPKYG--PWEK 457 (616)
Q Consensus 386 ~n~~g~~~~~~~s~~~~~~~~~-~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~-----~~~i~~Y~i~~~~~~~--~~~~ 457 (616)
.| .|.+.++. ...+.+.. ..+++|. +.+... .+++.|+|.+|...+ .+.+.+|+|.|++.++ .|..
T Consensus 81 ~n-~~~S~~s~---~~~f~~~~~~~~~pP~-v~~~~~-~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~ 154 (306)
T 3s98_A 81 EK-ENTSSWYE---VDSFTPFRKAQIGPPE-VHLEAE-DKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERI 154 (306)
T ss_dssp EC-SSCEEEEE---CCCBCHHHHCBCCCCE-EEEEEC-SSCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEEE
T ss_pred Ee-CCcCCCEe---eeeEechhhCccCCCe-EEEEEc-CCEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEEE
Confidence 99 77655432 22221111 2344553 666644 468999999554321 2468999999988776 3432
Q ss_pred eEeecCCccEEEcCCCCCCCeEEEEEEEEc--CCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeC
Q psy12426 458 ACIVPANITATSVPDLKEGEEYEFRVIAVN--KGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKN 535 (616)
Q Consensus 458 ~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n--~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~ 535 (616)
......++|.+|.|++.|.|+|+|.| ..|.|++|......+...
T Consensus 155 ----~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~------------------------------ 200 (306)
T 3s98_A 155 ----ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE------------------------------ 200 (306)
T ss_dssp ----EEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSC------------------------------
T ss_pred ----ecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCC------------------------------
Confidence 12357899999999999999999999 678999887654433221
Q ss_pred eeeeccccccceeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEe--------ecCCCCeEEc
Q psy12426 536 FVLDLNEGLKSMVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQPISNGGSAIKGYEVERR--------ERTSGRWIKI 606 (616)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~--------~~~~~~w~~~ 606 (616)
.++.+|.++.+.. ..+++.|+|++|..+ .+|.+.|. ..++++|.++
T Consensus 201 -------------------~p~~~P~~v~~~~-~~~s~~l~W~~p~~~-----~~~~v~~~~gy~~~~~~~~~~~W~~~ 254 (306)
T 3s98_A 201 -------------------NELPPPENIEVSV-QNQNYVLKWDYTYAN-----MTFQVQWLHAFLKRNPGNHLYKWKQI 254 (306)
T ss_dssp -------------------CSSCCCEEEEEEE-ETTEEEEEEECSSSS-----CEEEEEEEEGGGGSCC----CCCEEC
T ss_pred -------------------CcCCCCceEEEEE-ecCEEEEEeCCCCCc-----EEEEEEEehhhhhccccccccCceEC
Confidence 2245677777754 458899999987432 24444443 4557789965
No 108
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.79 E-value=3.8e-18 Score=152.84 Aligned_cols=152 Identities=24% Similarity=0.382 Sum_probs=120.8
Q ss_pred CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCC--CCceEe-EeecCCccEEEcCCCCCCCeEEEEE
Q psy12426 407 FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKY--GPWEKA-CIVPANITATSVPDLKEGEEYEFRV 483 (616)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~--~~~~~~-~~~~~~~~~~~l~~L~p~t~Y~~~v 483 (616)
..+|++|.++.+.. +.+++.|+|.+|. +++.+|.+|.|+|+... +.|... ...++....+.+ +|.|++.|.|+|
T Consensus 3 ~~~P~~P~~~~~~~-~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V 79 (205)
T 1cfb_A 3 QDVPNAPKLTGITC-QADKAEIHWEQQG-DNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRV 79 (205)
T ss_dssp CCCCCCCEEEEEEE-CSSEEEEEEECCC-CTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEE
T ss_pred ccCCCCCCCcEEEe-cCCEEEEEEECcc-cCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEE
Confidence 36789999999999 9999999999874 55668999999998764 367543 344566778888 999999999999
Q ss_pred EEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCC
Q psy12426 484 IAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKP 563 (616)
Q Consensus 484 ~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 563 (616)
+|.|..|.|++|.....+++... .++.+|.++
T Consensus 80 ~A~n~~G~~~~s~~~~~~~T~~~------------------------------------------------~P~~~P~~~ 111 (205)
T 1cfb_A 80 IAFNKIGASPPSAHSDSCTTQPD------------------------------------------------VPFKNPDNV 111 (205)
T ss_dssp EEEETTEECCCCCCCCCEEECCC------------------------------------------------CCSCCCSCC
T ss_pred EEEECCccCCCCCCceeEEcCCc------------------------------------------------CCCCCCeee
Confidence 99999999998854444443321 234678889
Q ss_pred eEEeecCCcEEEEeeCCC-CCCCCceeeeEEEEeecCCCC-eEEccCC
Q psy12426 564 EATDVDKDHIKIKWQQPI-SNGGSAIKGYEVERRERTSGR-WIKITPD 609 (616)
Q Consensus 564 ~~~~~~~~~i~l~W~~p~-~~~~~~i~~Y~i~~~~~~~~~-w~~~~~~ 609 (616)
++...+.++|.|+|++|. .+.||.|.+|+|.|+..+... |..+...
T Consensus 112 ~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~~~ 159 (205)
T 1cfb_A 112 VGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIF 159 (205)
T ss_dssp EEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEEC
T ss_pred EeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEEec
Confidence 999999999999999976 245899999999999887654 8876543
No 109
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.79 E-value=8.8e-19 Score=174.90 Aligned_cols=277 Identities=11% Similarity=-0.022 Sum_probs=157.9
Q ss_pred ceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcc---eeecCCC--------ceee--eecCcccccEEEEeeccCccc
Q psy12426 87 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPH---IARAKKG--------KCYH--LVGTLLKDSIYEQLKRSGLFD 153 (616)
Q Consensus 87 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~---~~~~~~p--------~~~~--~~g~p~~~~~~~~~~~~~~~~ 153 (616)
+|.|.++.+.|+|.|.|.|.|..|.........+. .+....| ..+. ..|.|.+.+.|++ +++..+
T Consensus 104 sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k--~~~~~~ 181 (423)
T 3qs7_E 104 SMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVL--CDSQGE 181 (423)
T ss_dssp EEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEE--C-----
T ss_pred EEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEE--CCCCCc
Confidence 58999999999999999999998865432100000 0000111 1111 2389999999999 533211
Q ss_pred ccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCe
Q psy12426 154 QFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSN 233 (616)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~ 233 (616)
.........+..... -+...|.|.|+|.|.|..|..... .+.+.. ..+|.+ .+.+..+.+|+.
T Consensus 182 ----~~~~~~~~~~~~~~~-----~l~~~d~G~Y~C~A~N~~G~~~~~----~~~l~V-~~~p~~---~~~~~~v~~G~~ 244 (423)
T 3qs7_E 182 ----SCKEESPAVVKKEEK-----VLHELFGTDIRCCARNELGRECTR----LFTIDL-NQTPQT---TLPQLFLKVGEP 244 (423)
T ss_dssp ------------CEEECCS-----EECCCCSSCEEEEEECSSCEEEEE----CEEEES-SSCCCS---STTEEEEETTSC
T ss_pred ----cccccccccccccce-----EEecccCeEEEEEEEcCCCCccee----eEEEEE-ecCCcc---CCCceEEeCCCe
Confidence 000000000000111 125789999999999998864321 122222 123332 234678999999
Q ss_pred EEEEEEEee-ecCceeEEEECCeeecccCcEEEE--ec----CCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEE
Q psy12426 234 FEFDINVIG-EPIPTKEWLCNDITIISKDRFKIV--ND----DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 306 (616)
Q Consensus 234 ~~l~c~~~~-~p~~~~~W~~~~~~~~~~~~~~~~--~~----~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v 306 (616)
+.|.|.+.+ .|.+.+.|++++..+.....+... .. .....|.|.++...|.|.|+|.|.|. ....+.|.|
T Consensus 245 v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V 321 (423)
T 3qs7_E 245 LWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTI 321 (423)
T ss_dssp EEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEE
T ss_pred EEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEE
Confidence 999999999 677999999999877544322111 11 11247999999999999999999987 666777888
Q ss_pred ecCCCCCCCC--ccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc---cccceEEeccccCCCeEEE
Q psy12426 307 LDIPSPPEGP--LKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD---VSGTYTRAENLIEGHDYNF 381 (616)
Q Consensus 307 ~~~p~~p~~~--~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~~~~~y~~ 381 (616)
..+|.....+ ..+....+..+.|.|...... .. .+.|...+. -..... .....+....+...+.+.|
T Consensus 322 ~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P----~p--~i~W~k~g~--~l~~~~~~~~~~~~~~~~~~~~~D~G~Y 393 (423)
T 3qs7_E 322 VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYP----QI--RCTWTFSRK--SFPCEQKGLDNGYSISKFCNHKHQPGEY 393 (423)
T ss_dssp ESSCEEEEC---CEECCCTTCCCCEEEEEEEES----CC--EEEEEETTE--EEECBCCBCSSSSEEEEECCCTTCCSCE
T ss_pred EeCCcceEcCCCccEEecCCCeEEEEEEEEEcC----CC--eEEEEECCE--ECCCccccccCCcEEEEEecccccCEEE
Confidence 7765422111 122234456777777753221 11 223322211 000000 0112222245556788999
Q ss_pred EEEEEecCcCCC
Q psy12426 382 RVKAVNKIGESL 393 (616)
Q Consensus 382 ~v~a~n~~g~~~ 393 (616)
+|.|.|..|...
T Consensus 394 tC~A~N~~G~~~ 405 (423)
T 3qs7_E 394 IFHAENDDAQFT 405 (423)
T ss_dssp EEEEEETTEEEE
T ss_pred EEEEEcCCceEE
Confidence 999999999753
No 110
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.79 E-value=5e-18 Score=169.47 Aligned_cols=328 Identities=15% Similarity=0.113 Sum_probs=134.4
Q ss_pred cccccEEEEeeccCcccccccCCCceEe---cccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEE--ecc
Q psy12426 137 LLKDSIYEQLKRSGLFDQFHLCPIWEKC---AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI--ARA 211 (616)
Q Consensus 137 p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~--~~~ 211 (616)
++. |.+++ + . .+.+.|... ..+......++..+|.+...|.+++.|.| .+.+..+.. ..+. ...
T Consensus 36 ~i~-Y~V~y--~----~--~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~A~n-~~~S~~s~~-~~~~~~~~~ 104 (414)
T 3se4_A 36 NVT-FSFDY--Q----K--TGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-ENTSSWYEV-DSFTPFRKA 104 (414)
T ss_dssp -CE-EEEEE--E----E--SSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEEEEE-TTEEEEEEC-CCBCHHHHC
T ss_pred CeE-EEEEE--E----E--CCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEEEee-CCcCCCEec-Cceeecccc
Confidence 444 88888 4 1 244568643 23344444555667899999999999999 444432211 1111 112
Q ss_pred ccCCCceeccCCcceEEEcCCeEEEEEEEeeec----------C--ceeEEEECCeeecccCcEEEEecCCceEEEecCC
Q psy12426 212 KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEP----------I--PTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDS 279 (616)
Q Consensus 212 ~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p----------~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l 279 (616)
...+|.+. +. .....+.+.+. ...+ . -.+.|.+++.. ....+. +....+.|.+|
T Consensus 105 ~~~pP~v~------~~-~~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~----~~~~~~--~~~~~~~i~~L 170 (414)
T 3se4_A 105 QIGPPEVH------LE-AEDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSG----VEERIE--NIYSRHKIYKL 170 (414)
T ss_dssp CCCCCEEE------EE-ECSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTC----CEEEEE--EECSEEEECCC
T ss_pred eeCCCeEE------EE-EcCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCC----ceEEEe--cCCcEEEEcCC
Confidence 23344321 11 22334555554 2111 0 13344444322 111122 22347999999
Q ss_pred CCCCcEEEEEEEEcC--CCCceeeEEEEEecC---C-CCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeC-
Q psy12426 280 KRGDSGIYTLAVKNS--WGTDKGTAKVTVLDI---P-SPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDM- 352 (616)
Q Consensus 280 ~~~~~g~y~c~a~n~--~g~~~~~~~l~v~~~---p-~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~- 352 (616)
.+...|.+++.|.|. .|.+..+....+... | .+|.+ +.+... ...+.|.|.++. ...+|.|+|+..
T Consensus 171 ~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~-v~~~~~-~~~~~l~W~pp~-----~~~~Y~v~y~~~~ 243 (414)
T 3se4_A 171 SPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPEN-IEVSVQ-NQNYVLKWDYTY-----ANMTFQVQWLHAF 243 (414)
T ss_dssp CTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEE-EEEEEE-TTEEEEEEECSS-----SSCEEEEEEEESG
T ss_pred CCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCc-cEEEEe-cCCeEEEECCCC-----CCeEEEEEEEehh
Confidence 999999999999994 454444333333222 2 23333 444444 467999999753 235999999863
Q ss_pred -------CCCCEEEcc---ccccceEEec-cccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCC-CCCCCCCCEEEE
Q psy12426 353 -------ETGRWVPMG---DVSGTYTRAE-NLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFG-RPDRPGQPTVTD 420 (616)
Q Consensus 353 -------~~~~~~~~~---~~~~~~~~i~-~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~-~p~~p~~~~~~~ 420 (616)
+...|.... ......+.+. +|.+++.|.++|.|.|..|.|.++ ....+.+... ++++|. +.+..
T Consensus 244 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s---~~~~~~t~~~~~~~pP~-l~~~~ 319 (414)
T 3se4_A 244 LKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWS---EEIKFDTEIQAFLLPPV-FNIRS 319 (414)
T ss_dssp GGSCCCC--CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEEC---CCEEEETTCC-------------
T ss_pred ccccccccccCceECCCccCCCCCEEcCCcccccCccEEEEEEEecCCCccccc---ccccccchhccccCCCe-EEEEE
Confidence 234565432 2334566665 699999999999999999988774 3444444444 456665 77764
Q ss_pred ecCCeEEEEecCCCCCCC-----CcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcC----CCC
Q psy12426 421 WGKDHVDLEWTPPKKDGG-----SPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVNK----GGP 491 (616)
Q Consensus 421 ~~~~~v~l~W~~p~~~~~-----~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~----~G~ 491 (616)
..+++.|.|.+|...++ +.+..|.|.|.+.++.-... .......++|.+|.|++.|.|+|+|.+. .|.
T Consensus 320 -~~~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~~~~~~--~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~ 396 (414)
T 3se4_A 320 -LSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERK--IIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKS 396 (414)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CCCeEEEEEECCCCccccchhhcCCeEEEEEEEECCCCceEE--EEecCCeEEeCCCCCCCeEEEEEEEEecccccCCC
Confidence 35799999998875543 24788999887765411111 1234678999999999999999999983 589
Q ss_pred CCCCCCCCCEEe
Q psy12426 492 GEPSKASAPVTC 503 (616)
Q Consensus 492 g~~s~~~~~~~~ 503 (616)
|++|....+.|.
T Consensus 397 g~~S~~~~~~T~ 408 (414)
T 3se4_A 397 SVFSDAVCEKTK 408 (414)
T ss_dssp ------------
T ss_pred CCCCCCEeEEeC
Confidence 999987666553
No 111
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.79 E-value=3.9e-18 Score=151.88 Aligned_cols=149 Identities=34% Similarity=0.606 Sum_probs=126.0
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
.+|++|.++.+...+.+++.|+|.+|..+++.++.+|.|+|+..+. .|.... .......+++.+|.|++.|.|+|+|.
T Consensus 4 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~~L~p~t~Y~~~V~a~ 82 (197)
T 3lpw_A 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA-TNCHKTSWKVDQLQEGCSYYFRVLAE 82 (197)
T ss_dssp CSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEE-EEECSSEEEECCCCTTCEEEEEEEEE
T ss_pred CCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEee-cCCCccEEEEcCCCCCCEEEEEEEEE
Confidence 5788999999999999999999998876777779999999998876 666543 33557899999999999999999999
Q ss_pred cCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEE
Q psy12426 487 NKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEAT 566 (616)
Q Consensus 487 n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~ 566 (616)
|..|.|.++......+.. .+|.+|.++.+.
T Consensus 83 ~~~g~~~~s~~~~~~t~~--------------------------------------------------~~p~~p~~~~~~ 112 (197)
T 3lpw_A 83 NEYGIGLPAETAESVKAS--------------------------------------------------ERPLPPGKITLM 112 (197)
T ss_dssp ETTEECCCEECSSCEESC--------------------------------------------------CCCCCCSCEEEE
T ss_pred cCccccCCCCCccceecC--------------------------------------------------CCCCCCcccEEE
Confidence 999999888766655543 347788888888
Q ss_pred eecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCCCeEEcc
Q psy12426 567 DVDKDHIKIKWQQPISNGGSAIKGYEVERRERTSGRWIKIT 607 (616)
Q Consensus 567 ~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~w~~~~ 607 (616)
..+.+++.|+|++|..+.++.+.+|.|.|+..++.+|..+.
T Consensus 113 ~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~ 153 (197)
T 3lpw_A 113 DVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA 153 (197)
T ss_dssp EECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE
T ss_pred eccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee
Confidence 89999999999998766556999999999998888888754
No 112
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.79 E-value=1.8e-18 Score=156.80 Aligned_cols=126 Identities=19% Similarity=0.264 Sum_probs=92.3
Q ss_pred EeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE-eeecCceeEEEEC
Q psy12426 175 KVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKEWLCN 253 (616)
Q Consensus 175 ~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~-~~~p~~~~~W~~~ 253 (616)
.|.+++..|.|.|+|.|.|..|...... +.+.....+|.+ ...+....+..|+.+.|.|.+ .+.|.+.+.|+++
T Consensus 72 ~i~~v~~~d~G~Y~C~~~n~~g~~~~~~----~~l~v~~~~~~~-~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~ 146 (217)
T 2vr9_A 72 TMQGKKEQDGGEYWCVAKNRVGQAVSRH----ASLQIAVLRDDF-RVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKD 146 (217)
T ss_dssp CCBSSSCBCCEEEEEEEEETTEEEECCC----EEEEECEECCSC-SBCCCCEEECTTSCEEECCBCCCEESCCEEEEEET
T ss_pred EeccCCcccCceEEEEEecCCCcccccc----ceEEEEEeCCCc-EECCCccEEcCCCeEEEEEECCCCCCCCeEEEEEC
Confidence 5777888899999999998877532211 222222233444 233456788999999999999 8999999999999
Q ss_pred Ceeecc--------cCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy12426 254 DITIIS--------KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLD 308 (616)
Q Consensus 254 ~~~~~~--------~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~ 308 (616)
+..+.. ..++.+...+ .|.|.++...|.|.|+|.|.|..|....+..+.+..
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 147 GVPLDDLKAMSFGASSRVRIVDGG---NLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp TEEECCCCCC---CCCSEEEETTT---EEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CcCCCcccccccccCCcEEecCCC---cEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 998763 2334433333 899999999999999999999999877666555543
No 113
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.78 E-value=6.8e-19 Score=173.23 Aligned_cols=221 Identities=10% Similarity=-0.040 Sum_probs=147.4
Q ss_pred eEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccccCCCCCceEec
Q psy12426 12 IKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTEGDTPKGKVL 91 (616)
Q Consensus 12 ~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~~~~~~l~i~ 91 (616)
..+.+|+.+.|.|.+.|.|.|.|+|+|+|..+.. ....|.|.
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~--------------------------------------~~~~L~i~ 147 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ--------------------------------------GGKTLSVS 147 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECSSSCEEE--------------------------------------ESSEEEEC
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccc--------------------------------------cceEEEEe
Confidence 3578999999999999999999999999876531 13578899
Q ss_pred CcccCCeEEEEEEEEcCCCCCCCCCCCCccee-ecCCCc----------eee--eec-----CcccccEEEEeeccCccc
Q psy12426 92 DLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA-RAKKGK----------CYH--LVG-----TLLKDSIYEQLKRSGLFD 153 (616)
Q Consensus 92 ~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~-~~~~p~----------~~~--~~g-----~p~~~~~~~~~~~~~~~~ 153 (616)
++...|.|.|.|.|.|..+..... ...... ....|. .+. +.| .|.+.+.|++ ++..+.
T Consensus 148 ~v~~~d~G~Y~C~a~~~~~~~~~~--~~l~v~~~p~~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~--~g~~~~ 223 (363)
T 1wio_A 148 QLELQDSGTWTCTVLQNQKKVEFK--IDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQA--ERASSS 223 (363)
T ss_dssp SBCGGGCEECEEEEEETTEEEEEC--CEECEECCSCSEEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEE--SSCCCC
T ss_pred eCChhcCCEEEEEEecCCCeEEEE--EEEEEecCCCCCCceEEecCCEEEEEEEEecccccCCCceeEEEec--CCCCcc
Confidence 999999999999999875544332 111110 111111 111 114 6788999998 533322
Q ss_pred ccc-----cCCCceEecc--------cCCCCCeEEeecccCCCeEEEEEEEEeC--CCCCCCCCCCCCEEeccccCCCce
Q psy12426 154 QFH-----LCPIWEKCAQ--------TEGDTPKGKVLDLIEGNQYEFRVLAVNK--GGPGEPSDPTAPHIARAKKVSPYI 218 (616)
Q Consensus 154 ~~~-----~~~~~~~~~~--------~~~~~~~l~i~~l~~~~~~~y~c~a~n~--~g~~~~s~~~~~~~~~~~~~~P~~ 218 (616)
... .......... .......|.|.++...|.|.|+|.|.|. .|..... +.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~-----~~l~-------- 290 (363)
T 1wio_A 224 KSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQE-----VNLV-------- 290 (363)
T ss_dssp CCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEE-----EEEE--------
T ss_pred ceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEE-----EeEE--------
Confidence 000 0111111100 1233458999999999999999999998 7742211 1111
Q ss_pred eccCCcceEEEcCCeEEEEEEEeeecCce--eEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 219 NRDQLSDIKVRAGSNFEFDINVIGEPIPT--KEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 219 ~~~~~~~~~v~~g~~~~l~c~~~~~p~~~--~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
+....|+.+.|.|.+.+.|.+. +.|++++..+..+ ..|.|.++...|.|.|+|.|.|. |
T Consensus 291 -------V~~v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~-----------~~l~i~~v~~~d~G~Y~C~a~~~-~ 351 (363)
T 1wio_A 291 -------VMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVS-----------KREKAVWVLNPEAGMWQCLLSDS-G 351 (363)
T ss_dssp -------EEEECCCSSSEEEEEESSCCTTCCEEEECSSSSCSEE-----------ESSSEEEESSCCSEEEEEEECSS-S
T ss_pred -------EEEecCCCeeEEEEEccccCCCccEEEEeCCCceeee-----------eeeeeeeeccccceeEEEEEecC-C
Confidence 1112388899999999999888 9999999776532 25677889999999999999964 5
Q ss_pred CceeeEEEEE
Q psy12426 297 TDKGTAKVTV 306 (616)
Q Consensus 297 ~~~~~~~l~v 306 (616)
....+..+.|
T Consensus 352 ~~~~~~~~~V 361 (363)
T 1wio_A 352 QVLLESNIKV 361 (363)
T ss_dssp SCCEEEEEEE
T ss_pred eEEEecceEe
Confidence 5555555554
No 114
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.78 E-value=3.9e-19 Score=157.71 Aligned_cols=123 Identities=11% Similarity=-0.102 Sum_probs=89.2
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 250 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W 250 (616)
...|.|.+++.+|.|.|+|.|.|..|..... ..+.+ ..||.+ ...+....+.+|+.+.|.|.+.|.|.|.+.|
T Consensus 68 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~---~~l~V---~~p~~~-~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W 140 (203)
T 4fa8_A 68 TFFLVVTAANISHDGNYLCRMKLGETEVTKQ---EHLSV---VKPLTL-SVHSERSQFPDFSVLTVTCTVNAFPHPHVQW 140 (203)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEE---EEEEE---EEEEEE-EEEEEECCSSCSCCEEEEEEEEEESCCEEEE
T ss_pred EEEEEEccCCHHHCeEEEEEEEcCCCcEEEE---EEEEe---cCCcee-eecceeEEEcCCCEEEEEEEcCCCCCCEEEE
Confidence 3479999999999999999999988764321 11222 123444 3445566778999999999999999999999
Q ss_pred EECCeeec----ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCcee
Q psy12426 251 LCNDITII----SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 300 (616)
Q Consensus 251 ~~~~~~~~----~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 300 (616)
++++..+. ...++.+..++.-..+.|.++...|.|.|+|.|.|..|....
T Consensus 141 ~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 141 LMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp CCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred EECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 98765442 234555555565556777899999999999999999998754
No 115
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.78 E-value=5.9e-18 Score=150.06 Aligned_cols=182 Identities=21% Similarity=0.335 Sum_probs=128.2
Q ss_pred CCccCCC-CCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRR-HLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~-~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
||.|... .+.++.+.+|+.+.|.|.+.|.|.|.|.|+|++..+...+.|.-.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~--------------------------- 54 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--------------------------- 54 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEE---------------------------
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEe---------------------------
Confidence 6777543 355789999999999999999999999999999887744444322
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCcccccccCC
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHLCP 159 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~ 159 (616)
.....|.|.++...|.|.|.|.+.|..|..... .
T Consensus 55 ---~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~---------------------------~---------------- 88 (192)
T 2va4_A 55 ---GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQ---------------------------A---------------- 88 (192)
T ss_dssp ---TTTTEEEECSCCGGGCEEEEEEEEETTEEEEEE---------------------------E----------------
T ss_pred ---CCeeEEEEecCChhcCcEEEEEEEccccccceE---------------------------E----------------
Confidence 113457777777777777777776433211000 0
Q ss_pred CceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEE
Q psy12426 160 IWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDIN 239 (616)
Q Consensus 160 ~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~ 239 (616)
.+.+. .+|.+.. .....+..|+.+.|.|.
T Consensus 89 -------------~l~V~------------------------------------~~p~~~~--~~~~~~~~g~~v~l~C~ 117 (192)
T 2va4_A 89 -------------FLQVF------------------------------------VQPHIIQ--LKNETTYENGQVTLVCD 117 (192)
T ss_dssp -------------EEEEE------------------------------------EEEEEEE--ECCEEECTTSEEEEEEE
T ss_pred -------------EEEEE------------------------------------ccCcccc--cCcceEEeCCeEEEEEE
Confidence 11110 1121111 12345667999999999
Q ss_pred EeeecCceeEEEEC--Ceeecc-----cCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEE
Q psy12426 240 VIGEPIPTKEWLCN--DITIIS-----KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 306 (616)
Q Consensus 240 ~~~~p~~~~~W~~~--~~~~~~-----~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v 306 (616)
+.+.|.+.+.|+++ +..+.. ..++.+........|.|.++...|.|.|+|.|.|..|....++.|.|
T Consensus 118 ~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 118 AEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 99999999999998 555432 34566665566679999999999999999999999998887777765
No 116
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.78 E-value=1e-17 Score=151.18 Aligned_cols=190 Identities=15% Similarity=0.161 Sum_probs=136.1
Q ss_pred CCCCCCCCccceee-cCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC------CCEEEccc---cccceEEeccccCCCe
Q psy12426 309 IPSPPEGPLKPSNI-TKSSCNLEWRAPRDDGGTDILHYVVEKMDMET------GRWVPMGD---VSGTYTRAENLIEGHD 378 (616)
Q Consensus 309 ~p~~p~~~~~~~~~-~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~------~~~~~~~~---~~~~~~~i~~L~~~~~ 378 (616)
+|.+|.+ +.+... ....+.++|.++.+. +. ...|.|.++.... ..+..+.. .....+.+.+|.+++.
T Consensus 4 pP~~P~~-l~c~~~~~~~~~~~~W~p~~~~-~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 80 (215)
T 1cd9_B 4 PPASPSN-LSCLMHLTTNSLVCQWEPGPET-HL-PTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQY 80 (215)
T ss_dssp CCCCCEE-EEEEEETTTTEEEEEEECCSCC-SS-CCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSC
T ss_pred CCCCCee-eeeecCCCcccEEEEecCCCCC-CC-ceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceE
Confidence 5566665 555555 578999999976553 33 3569999876432 12333321 2345677789999999
Q ss_pred EEEEEEEEecCcCCCCccccCCEEccC-CCCCCCCCCCCEEEEe------cCCeEEEEecCCCCCCCCcceeEEEEEe-e
Q psy12426 379 YNFRVKAVNKIGESLPLVCQSPITAKD-PFGRPDRPGQPTVTDW------GKDHVDLEWTPPKKDGGSPISQYIIEKK-P 450 (616)
Q Consensus 379 y~~~v~a~n~~g~~~~~~~s~~~~~~~-~~~~p~~p~~~~~~~~------~~~~v~l~W~~p~~~~~~~i~~Y~i~~~-~ 450 (616)
|.|+|.|.|..|.+. +..+.+.. ...+|++|.++.+... ..+++.|+|++|.. ++..+.+|+|+|+ .
T Consensus 81 Y~~~V~A~N~~G~~~----s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~~~l~Y~v~y~~~ 155 (215)
T 1cd9_B 81 MAIWVQAENMLGSSE----SPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEYMEQECELRYQPQ 155 (215)
T ss_dssp EEEEEEEEETTEEEE----CCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG-GTTSCEEEEEEEEES
T ss_pred EEEEEEEECCCCCcc----CccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCeEEEEEEEEEccC
Confidence 999999999998753 22233322 2246888888877665 57889999998764 3444579999999 5
Q ss_pred CCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccC
Q psy12426 451 KYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPR 506 (616)
Q Consensus 451 ~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~ 506 (616)
.++ .|............+.|.+|.|++.|.|+|+|.+..|.|.+|..+..+...+.
T Consensus 156 ~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~ 212 (215)
T 1cd9_B 156 LKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPT 212 (215)
T ss_dssp STTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCC
T ss_pred CCCCCcEEEecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecC
Confidence 555 78765444455788999999999999999999999999888888877766543
No 117
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.78 E-value=2.2e-17 Score=163.37 Aligned_cols=293 Identities=16% Similarity=0.078 Sum_probs=193.3
Q ss_pred CCeEEEEEEEE-eC---CCCCCCCCCCCCEEecccc-CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCee
Q psy12426 182 GNQYEFRVLAV-NK---GGPGEPSDPTAPHIARAKK-VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDIT 256 (616)
Q Consensus 182 ~~~~~y~c~a~-n~---~g~~~~s~~~~~~~~~~~~-~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~ 256 (616)
...+..++++. ++ .|....|+++......... ..+. -.|.+..+..|+++++.|..... .....
T Consensus 162 c~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~~~~~---ifP~~~vv~~GS~vt~~Ci~~~~---~~~~~----- 230 (483)
T 3e0g_A 162 CAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDSQTK---VFPQDKVILVGSDITFCCVSQEK---VLSAL----- 230 (483)
T ss_dssp SSCEEEEEEEEEECTTCCSEECCCCCCCCEEECCCCCSSCC---EESCSEEEETTCCEEEEECCSSC---EEEEE-----
T ss_pred CCccEEEEEEEecccccCCCCCCcCCCChhhccccCCCCcE---EeccCCEEeCCCCEEEEEEeCcc---cccee-----
Confidence 44667777776 33 4555566666544443211 1222 23677889999999999987632 11111
Q ss_pred ecccCcEEEEecCCceEEEecCCCCC--CcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCC
Q psy12426 257 IISKDRFKIVNDDKSTKLKVFDSKRG--DSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAP 334 (616)
Q Consensus 257 ~~~~~~~~~~~~~~~~~l~i~~l~~~--~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~ 334 (616)
+................++|.|+... ....|.|... .......+.+..+|.+|.+ +.+.......+.++|.++
T Consensus 231 l~~~~~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~----~~~~g~~l~vg~PP~~P~n-lsC~s~~~~sltCsW~pg 305 (483)
T 3e0g_A 231 IGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTTE----DNIFGTVIFAGYPPDTPQQ-LNCETHDLKEIICSWNPG 305 (483)
T ss_dssp SSSCCBCCEECSSSCEEEEECSCCCCCSSCEEEEEEES----SCEEEEEEEEECCCCCCEE-EEEEBSSTTEEEEEEECC
T ss_pred cCcccceeEEecCCEEEEEEeCCCCccCccceEEEecC----CcccceEEECcCCCCCCCc-cEEEecCCCEEEEEECCC
Confidence 22122222334555678899988763 3346888752 2345567888888888887 666666677999999976
Q ss_pred CCCC--CCceEEEEEEEEeCCCCCEEEccc-----cccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCC
Q psy12426 335 RDDG--GTDILHYVVEKMDMETGRWVPMGD-----VSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPF 407 (616)
Q Consensus 335 ~~~~--~~~i~~y~v~~~~~~~~~~~~~~~-----~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~ 407 (616)
.+.+ +.....|.|.++..+. ...+.. .....+.+..|.+.+.|.|+|.|.|..|.+.. ...+.+ ...
T Consensus 306 ~dt~l~G~~~t~YtL~y~~~g~--~~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S---~~~~~~-~~~ 379 (483)
T 3e0g_A 306 RVTALVGPRATSYTLVESFSGK--YVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQS---TILVNI-TEK 379 (483)
T ss_dssp SCCSCCGGGCCEEEEEETTTCC--EEEECCCSSCSCSCEEEEEECCTTCCCEEEEEEEECSSCEEEE---EEEECG-GGG
T ss_pred CcCCcCCCCCeeEEEEEEECCC--CccccCCcccCCCEEEEEEccCCCCcEEEEEEEEEeCCCCccc---ceEEEe-ccc
Confidence 6543 3347899999875422 122221 23457888999999999999999999997652 112211 234
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEeecC---CccEEEcCCCCCCCeEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACIVPA---NITATSVPDLKEGEEYEFR 482 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~~~~---~~~~~~l~~L~p~t~Y~~~ 482 (616)
..|.+|.++.+...+.+.+.|+|.+|...++ .+..|+|+|+..++ .|... ...+ ....+.|.+|.|++.|.||
T Consensus 380 VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~-~~L~YeVrYr~~~~~~~~~~v-sv~~~~~~~~s~~l~~L~PgT~Y~vr 457 (483)
T 3e0g_A 380 VYPHTPTSFKVKDINSTAVKLSWHLPGNFAK-INFLCEIEIKKSNSVQEQRNV-TIQGVENSSYLVALDKLNPYTLYTFR 457 (483)
T ss_dssp BCCCCCEEEEECCSSSSSCCEEEECCSCCTT-SBCCCEEEEECSSSCCCEEEC-CCBCCSSSBCCCCCCSCCSSSSCEEE
T ss_pred cCCCCCeeeEEEEecCCeEEEEECCCCCCCC-ceEEEEEEEEECCCCCceEEE-EEeccCCceeEEEEeccCCCcEEEEE
Confidence 5788999999887788999999998864433 47889999998876 24432 2221 2346789999999999999
Q ss_pred EEEEcCCCCCCCCCCCC
Q psy12426 483 VIAVNKGGPGEPSKASA 499 (616)
Q Consensus 483 v~a~n~~G~g~~s~~~~ 499 (616)
|+|. ..|.|.+|..+.
T Consensus 458 VRA~-~~g~g~WSeWS~ 473 (483)
T 3e0g_A 458 IRCS-TETFWKWSKWSN 473 (483)
T ss_dssp EECC-CSSCCCCCCCCC
T ss_pred EEEe-eCCCCCcCCCCC
Confidence 9999 667644444443
No 118
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.78 E-value=1.1e-18 Score=176.86 Aligned_cols=264 Identities=7% Similarity=-0.087 Sum_probs=152.8
Q ss_pred CCCCceEecCCCeEEEEEEEeeec--CCeeeeeeCC--eeeee-----------------ccceEEEeecCCCCCceeEe
Q psy12426 7 RHLGDIKLSAGTTLKFDANIIGEP--VPHVDWRAGG--NPLNL-----------------RPIWEKCAQTEGDTPKGKVL 65 (616)
Q Consensus 7 ~~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~~--~~l~~-----------------~G~Y~C~a~n~~~~~~~~v~ 65 (616)
..|..+.+.+|++|.|.|.+.|.+ .+.|.|+|+. ..+.. .|+|.-..
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~------------ 72 (444)
T 1igt_B 5 QESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISR------------ 72 (444)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEE------------
T ss_pred ecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEE------------
Confidence 347788999999999999998874 5789999863 32210 11211110
Q ss_pred eeccCCccceeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCC--C-CCCCCC-------cceeecCCC-------
Q psy12426 66 DLIEGNHPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPG--E-PSDPTA-------PHIARAKKG------- 128 (616)
Q Consensus 66 ~~~~~~~p~w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~--~-~~~~~~-------~~~~~~~~p------- 128 (616)
. ......+|.|.+++..|+|.|.|.|.|..+.. . ...... ...+....|
T Consensus 73 ------------~--~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g 138 (444)
T 1igt_B 73 ------------D--NAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTG 138 (444)
T ss_dssp ------------E--TTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCS
T ss_pred ------------e--CCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCC
Confidence 0 01224589999999999999999999875431 0 010000 001110011
Q ss_pred ceee----eecC-ccc-ccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCC
Q psy12426 129 KCYH----LVGT-LLK-DSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSD 202 (616)
Q Consensus 129 ~~~~----~~g~-p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~ 202 (616)
..+. ..|. |.+ .+.|++ ++.... ............-.....|.|.++..+| |.|+|.|.|..|.....
T Consensus 139 ~~v~L~C~~~g~~P~p~~v~W~~--~~~~~~--~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~- 212 (444)
T 1igt_B 139 SSVTLGCLVKGYFPEPVTLTWNS--GSLSSG--VHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD- 212 (444)
T ss_dssp SCEEEEEEEEEEBSSCCEEEEGG--GTBCTT--EEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEE-
T ss_pred CcEEEEEEEcceeCCCcEEEEec--CCCCCC--eEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceE-
Confidence 1111 1153 655 788887 422211 0000000000000011357888999888 99999999998753211
Q ss_pred CCCCEEe---------------ccccCCCceeccCCcceE-EEcCCeEEEEEEEeeec----CceeEEEECCeeecccCc
Q psy12426 203 PTAPHIA---------------RAKKVSPYINRDQLSDIK-VRAGSNFEFDINVIGEP----IPTKEWLCNDITIISKDR 262 (616)
Q Consensus 203 ~~~~~~~---------------~~~~~~P~~~~~~~~~~~-v~~g~~~~l~c~~~~~p----~~~~~W~~~~~~~~~~~~ 262 (616)
..+.. .....+|.+....+.... +..|+.+.|.|.+.+.+ .+.+.|++++..+.....
T Consensus 213 --~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~ 290 (444)
T 1igt_B 213 --KKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQT 290 (444)
T ss_dssp --EECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTC
T ss_pred --EEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCccc
Confidence 00000 011124544222222222 57899999999999984 369999999987653321
Q ss_pred E--EEEecC---CceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy12426 263 F--KIVNDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 304 (616)
Q Consensus 263 ~--~~~~~~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l 304 (616)
. ....++ ....|.|.++...|.|.|+|.|.|..|.......+
T Consensus 291 ~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v 337 (444)
T 1igt_B 291 QTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTI 337 (444)
T ss_dssp BCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEE
T ss_pred ccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEE
Confidence 1 111111 23489999999999999999999988876433433
No 119
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.78 E-value=2.3e-19 Score=181.67 Aligned_cols=263 Identities=12% Similarity=0.056 Sum_probs=150.3
Q ss_pred cCCCeEEEEEEEee-ecCC-eeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccccCCCCCceEecC
Q psy12426 15 SAGTTLKFDANIIG-EPVP-HVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTEGDTPKGKVLD 92 (616)
Q Consensus 15 ~~g~~v~l~C~~~g-~P~p-~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~~~~~~l~i~~ 92 (616)
.+|+.+.|.|.+.| .|.| .|+|+|+|..+.....+.-..... ..+.. .....|.|.+
T Consensus 129 ~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~---~~~~~------------------~~~~~L~i~~ 187 (438)
T 1qgc_4 129 LTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDS---KDSTY------------------SMSSTLTLTK 187 (438)
T ss_dssp HHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCT---TTCCE------------------EEEEEEEEEH
T ss_pred ccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccC---CCCcE------------------EEEEEEEEeC
Confidence 45889999999987 7777 899999998876321111100000 00000 0023688889
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCC----cceeecCCC------ceee----eecCc--ccccEEEEeecc-C-cccc
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTA----PHIARAKKG------KCYH----LVGTL--LKDSIYEQLKRS-G-LFDQ 154 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~----~~~~~~~~p------~~~~----~~g~p--~~~~~~~~~~~~-~-~~~~ 154 (616)
+...|.|.|.|.|.|..|......... ...+....+ ..+. +.|.| .+.+.|++ +. | .+..
T Consensus 188 ~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k--~~~g~~~~~ 265 (438)
T 1qgc_4 188 DEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVR--QTPEKRLEW 265 (438)
T ss_dssp HHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEE--EETTTEEEE
T ss_pred cccCCCCeEEEEEEecccCCceecccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEE--CCCCCCcEE
Confidence 999999999999999877642110000 000000001 1111 22666 56889988 41 1 1000
Q ss_pred c--------------ccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCC--CCCCCCCEEecc-ccCCCc
Q psy12426 155 F--------------HLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE--PSDPTAPHIARA-KKVSPY 217 (616)
Q Consensus 155 ~--------------~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~--~s~~~~~~~~~~-~~~~P~ 217 (616)
. ...++.............|.|.+++.+|.|.|+|.|.|..+... .......+.+.. ...+|.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~ 345 (438)
T 1qgc_4 266 VATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPS 345 (438)
T ss_dssp EEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCE
T ss_pred EEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCe
Confidence 0 00111211111123345899999999999999999998654211 100111233332 223455
Q ss_pred eeccCCcceEEEcCCeEEEEEEEeee-cCc-eeEEEECCeeecccCcEEEEecCC---ceEEEecCCCCCCcEEEEEEEE
Q psy12426 218 INRDQLSDIKVRAGSNFEFDINVIGE-PIP-TKEWLCNDITIISKDRFKIVNDDK---STKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 218 ~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
+....+. ..+..|+.+.|.|.+.+. |.+ .+.|++++..+.......+...+. .+.|.|.++...| |.|+|.|.
T Consensus 346 v~~~~~~-~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~ 423 (438)
T 1qgc_4 346 VYPLAPG-SAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVA 423 (438)
T ss_dssp EEEECCC-GGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEE
T ss_pred EEEcCcc-cccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEE
Confidence 4322222 235579999999999997 877 999999987764221111111211 1368888888778 99999999
Q ss_pred cCCCCceeeE
Q psy12426 293 NSWGTDKGTA 302 (616)
Q Consensus 293 n~~g~~~~~~ 302 (616)
|..|......
T Consensus 424 n~~g~~~~~~ 433 (438)
T 1qgc_4 424 HPASSTKVDK 433 (438)
T ss_dssp EGGGTEEEEE
T ss_pred eCCCCcceee
Confidence 9888765443
No 120
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.78 E-value=1.8e-17 Score=159.05 Aligned_cols=134 Identities=8% Similarity=0.005 Sum_probs=98.0
Q ss_pred ecCCCCCCcEEEEEEEEcCCCCcee-eEEEEEe--cCCCCCCCCccceee------cCCeEEEEEeCCCCCCCCceEEEE
Q psy12426 276 VFDSKRGDSGIYTLAVKNSWGTDKG-TAKVTVL--DIPSPPEGPLKPSNI------TKSSCNLEWRAPRDDGGTDILHYV 346 (616)
Q Consensus 276 i~~l~~~~~g~y~c~a~n~~g~~~~-~~~l~v~--~~p~~p~~~~~~~~~------~~~~~~l~W~~~~~~~~~~i~~y~ 346 (616)
..+|.+...|.++|.|.|..|.... ...+... .+|.+|.+ +.+... ..+.+.|+|++|... +..+..|.
T Consensus 166 ~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~-~~~~~~~~~~~~~~~~l~l~W~~p~~~-~~~~l~Y~ 243 (313)
T 2d9q_B 166 RKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPML-RTMDPSPEAAPPQAGCLQLSWEPWQPG-LHINQKCE 243 (313)
T ss_dssp GGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEE-EECCC-------CCSCEEEEEECCGGG-TTSCEEEE
T ss_pred ccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCce-eEEEEecccccCCCCeEEEEECCCCCC-CceeEEEE
Confidence 3459999999999999999987532 2222222 24667765 554443 457899999987643 33468999
Q ss_pred EEEE-eCCCCCEEEcc--ccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCC
Q psy12426 347 VEKM-DMETGRWVPMG--DVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPD 411 (616)
Q Consensus 347 v~~~-~~~~~~~~~~~--~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~ 411 (616)
|+|+ ..+...|.... ......+.+.+|.+++.|.|+|+|.|..|.|.++.++..+.+.+...+|.
T Consensus 244 v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P~ 311 (313)
T 2d9q_B 244 LRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAAA 311 (313)
T ss_dssp EEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC----
T ss_pred EEEccCCCCCCcEEcccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCCC
Confidence 9999 66667787653 23456799999999999999999999999999998899998887766553
No 121
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.77 E-value=3.1e-19 Score=194.63 Aligned_cols=229 Identities=17% Similarity=0.130 Sum_probs=167.6
Q ss_pred ceEEEecCCCCCCcEEEEEEE-EcCCCC----ceeeEEEEEecC---CCCCCCCccceeecCCeEEEEEeCCCCCCCCce
Q psy12426 271 STKLKVFDSKRGDSGIYTLAV-KNSWGT----DKGTAKVTVLDI---PSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDI 342 (616)
Q Consensus 271 ~~~l~i~~l~~~~~g~y~c~a-~n~~g~----~~~~~~l~v~~~---p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i 342 (616)
...+.|.+|.+...|.|++.| .|..|. +..+..+.+.+. |.+|.+ +.+...+.+++.|+|.+|...++ .+
T Consensus 548 ~~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~-l~~~~~s~tsI~LsW~pP~~~nG-~I 625 (897)
T 2dtg_E 548 HPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLD-PISVSNSSSQIILKWKPPSDPNG-NI 625 (897)
T ss_dssp CCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEE-EEEEECSSSCEEEEEECCCCSSS-SC
T ss_pred ccceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcc-eEEEeCCCCEEEEEEeCCCCCCC-Ce
Confidence 357899999999999999999 888776 344444455544 444444 56667778899999998865544 69
Q ss_pred EEEEEEEEeCCCC-----------------------------------------------------------------CE
Q psy12426 343 LHYVVEKMDMETG-----------------------------------------------------------------RW 357 (616)
Q Consensus 343 ~~y~v~~~~~~~~-----------------------------------------------------------------~~ 357 (616)
.+|.|+|+..... .|
T Consensus 626 ~~Y~V~~~~~~~~~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W 705 (897)
T 2dtg_E 626 THYLVFWERQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTF 705 (897)
T ss_dssp SEEECCEEEECCCCSCTTCSSSCSCCCCCC--------------------------------------------------
T ss_pred eEEEEEEEECCCCccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeE
Confidence 9999988653210 11
Q ss_pred EEc---------------------------------cccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEcc
Q psy12426 358 VPM---------------------------------GDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAK 404 (616)
Q Consensus 358 ~~~---------------------------------~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~ 404 (616)
... .......+.+.+|.+++.|.|+|.|.|..|.+.....+..+.+.
T Consensus 706 ~~~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~ 785 (897)
T 2dtg_E 706 EDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSAR 785 (897)
T ss_dssp ------------------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEE
T ss_pred EEccCceEEccCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEe
Confidence 100 00123678999999999999999999999987643224555555
Q ss_pred CCC--CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceE-eE--eecCCccEEEcCCCCCCCeE
Q psy12426 405 DPF--GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEK-AC--IVPANITATSVPDLKEGEEY 479 (616)
Q Consensus 405 ~~~--~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~-~~--~~~~~~~~~~l~~L~p~t~Y 479 (616)
+.. .+|.+|.++.+...+.+++.|+|.+|..+++ .|.+|.|+|+..++.+.. .. ........++|.+|.|+ +|
T Consensus 786 T~~~~~~p~~P~~l~~~~~~~~sv~LsW~~P~~~nG-~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~~~~~l~~L~pg-tY 863 (897)
T 2dtg_E 786 TMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNG-LIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NY 863 (897)
T ss_dssp CCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCSCSS-CEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EE
T ss_pred ccCccCCCCCCcceEEEeCCCCEEEEEECCCCCCCC-CEEEEEEEEEECCCcceEEEEeeeeecccCcEEECCCCCC-cE
Confidence 543 5678888998888889999999998876555 599999999887642221 11 11345678999999999 69
Q ss_pred EEEEEEEcCCCCCCCCCCCCCEEe
Q psy12426 480 EFRVIAVNKGGPGEPSKASAPVTC 503 (616)
Q Consensus 480 ~~~v~a~n~~G~g~~s~~~~~~~~ 503 (616)
.|+|+|.|..|.|++|.+..+.+.
T Consensus 864 ~~rV~A~n~~G~G~~S~~v~~~T~ 887 (897)
T 2dtg_E 864 SVRIRATSLAGNGSWTEPTYFYVT 887 (897)
T ss_dssp CCCCCEEETTBCCCCCCCCEECCC
T ss_pred EEEEEEEeCCcccCCCCCEEEEeC
Confidence 999999999999999987655443
No 122
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.77 E-value=1e-16 Score=163.70 Aligned_cols=301 Identities=12% Similarity=0.021 Sum_probs=160.5
Q ss_pred CCCCceEecCCCeEEEEEEEeeec--CCeeeeeeCC--eeeeeccceEEEeecC----CCCCceeEeeeccCCccceeec
Q psy12426 7 RHLGDIKLSAGTTLKFDANIIGEP--VPHVDWRAGG--NPLNLRPIWEKCAQTE----GDTPKGKVLDLIEGNHPIWEKC 78 (616)
Q Consensus 7 ~~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~~--~~l~~~G~Y~C~a~n~----~~~~~~~v~~~~~~~~p~w~~~ 78 (616)
+.|..+.+.+|++|+|.|.+.|.+ .+.|.|||+. +.+..- .|. ...+. .....+++...
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~R~~~~----------- 72 (475)
T 1iga_A 6 EQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWM-GWI-SAGTGNTKYSQKFRGRVTFT----------- 72 (475)
T ss_pred ccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEE-EEE-ecCCCceecCcccCCceEEE-----------
Confidence 458899999999999999998875 6789999963 222100 000 00000 00001111100
Q ss_pred cccCCCCCceEecCcccCCeEEEEEEEEcCCCCC------CCCCCCCc-------ceeecCCC------ceee----eec
Q psy12426 79 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPG------EPSDPTAP-------HIARAKKG------KCYH----LVG 135 (616)
Q Consensus 79 ~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~------~~~~~~~~-------~~~~~~~p------~~~~----~~g 135 (616)
........+|.|.++++.|+|.|.|.+.|..|.. .......+ ..+....+ ..+. ..|
T Consensus 73 ~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~g 152 (475)
T 1iga_A 73 RDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQG 152 (475)
T ss_pred EcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEee
Confidence 0001234589999999999999999999976521 01100000 00111111 1111 125
Q ss_pred C-cc-c-ccEEEEeeccCcccccccCCCceEecccCCC----CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEE
Q psy12426 136 T-LL-K-DSIYEQLKRSGLFDQFHLCPIWEKCAQTEGD----TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI 208 (616)
Q Consensus 136 ~-p~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~ 208 (616)
. |. + .+.|++ + +... ............++ ...|.|......|.|.|+|.|.|..+.... ..+.
T Consensus 153 ~~P~~p~~v~W~~--~-~~~~---~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~----~~v~ 222 (475)
T 1iga_A 153 FFPQEPLSVTWSE--S-GQGV---TARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQD----VTVP 222 (475)
T ss_pred ecCCCceEEEEcC--C-Cccc---ceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCcee----eeEe
Confidence 4 54 3 788876 4 2100 00000000000111 124778888889999999999998763211 1121
Q ss_pred ecc-----------------ccCCCceeccCCcceEEEcCCeEEEEEEEeeecC---ceeEEEECCeeecccCc--EEEE
Q psy12426 209 ARA-----------------KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI---PTKEWLCNDITIISKDR--FKIV 266 (616)
Q Consensus 209 ~~~-----------------~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~---~~~~W~~~~~~~~~~~~--~~~~ 266 (616)
... ...+|.+....+....+..|+.+.|.|.+.+.+. +.+.| ++..+..... ....
T Consensus 223 l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~ 300 (475)
T 1iga_A 223 CPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERD 300 (475)
T ss_pred cccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceEC
Confidence 100 0024444233333334679999999999998754 68999 4333321111 1111
Q ss_pred ecC---CceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccce------eecCCeEEEEEeCC
Q psy12426 267 NDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPS------NITKSSCNLEWRAP 334 (616)
Q Consensus 267 ~~~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~------~~~~~~~~l~W~~~ 334 (616)
..+ ....|.|.++...|.|.|+|.|.|..|.......+.+.....+|. +.+. ...+..+.|.|...
T Consensus 301 ~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~--v~~~~~~~~~v~~g~~~~L~C~~~ 375 (475)
T 1iga_A 301 LCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPE--VHLLPPPSEELALNELVTLTCLAR 375 (475)
T ss_pred CCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCe--EEEECCChHHhccCCceEEEEEEe
Confidence 011 234799999999999999999999888765444443322222222 1111 12345688888753
No 123
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.77 E-value=3.1e-18 Score=153.98 Aligned_cols=147 Identities=26% Similarity=0.389 Sum_probs=116.8
Q ss_pred CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeec---CCccEEEcCCCCCCCeEEEE
Q psy12426 407 FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVP---ANITATSVPDLKEGEEYEFR 482 (616)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~---~~~~~~~l~~L~p~t~Y~~~ 482 (616)
..+|++|.++.+...+. ++.|+|.+|..+++.++.+|.|+|+..+. .|....... +....+++.+|.|++.|.|+
T Consensus 6 ~~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 84 (209)
T 2vkw_A 6 ADTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR 84 (209)
T ss_dssp CCCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEE
T ss_pred cCCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEE
Confidence 46788999999988777 68999998876677679999999998876 776654321 33569999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCC
Q psy12426 483 VIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSK 562 (616)
Q Consensus 483 v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 562 (616)
|+|.|..|.|++|......+... .+|.+|..
T Consensus 85 V~A~n~~G~~~~s~~~~~~T~~~-------------------------------------------------~~P~~P~~ 115 (209)
T 2vkw_A 85 LAALNGKGLGEISAASEFKTQPV-------------------------------------------------REPSAPKL 115 (209)
T ss_dssp EEEEETTEECCCCCCEEEECCCS-------------------------------------------------CSCCCCEE
T ss_pred EEEEcCCcccCCcccccccccCC-------------------------------------------------CCCCCCcc
Confidence 99999999998886544322110 14667777
Q ss_pred CeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCCCeEE
Q psy12426 563 PEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRERTSGRWIK 605 (616)
Q Consensus 563 ~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~w~~ 605 (616)
+.+...+.++|.|+|++| .+.++.|.+|.|.|+. +.++|..
T Consensus 116 ~~~~~~~~~sv~l~W~~p-~~~~~~i~~Y~v~~~~-~~~~~~~ 156 (209)
T 2vkw_A 116 EGQMGEDGNSIKVNLIKQ-DDGGSPIRHYLVRYRA-LSSEWKP 156 (209)
T ss_dssp EEEECTTSSCEEEEEECC-CCTTSCCCEEEEEEEE-TTSCCCC
T ss_pred cccccccCCeEEEEEECc-ccCCCCCceEEEEEEC-CCCCCce
Confidence 777888999999999998 4558999999999998 6667764
No 124
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.77 E-value=5.1e-18 Score=156.57 Aligned_cols=142 Identities=15% Similarity=0.184 Sum_probs=87.3
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWL 251 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~ 251 (616)
.|.|.+++..|.|.|+|.|.|..|..... ..+.+.. ...+|.+....+....+..|+.+.|.|.+.+.|.+.+.|+
T Consensus 73 ~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~---~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~ 149 (241)
T 3grw_A 73 SLVMESVVPSDRGNYTCVVENKFGSIRQT---YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWL 149 (241)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEE---EEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEE
T ss_pred EEEEEeCCcccCEEEEEEEeecCCceEEE---EEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEE
Confidence 45555555555555555555544432111 1111111 1123333344456677889999999999999999999999
Q ss_pred E----CCeeecccCcEEEE--------ecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCc
Q psy12426 252 C----NDITIISKDRFKIV--------NDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPL 317 (616)
Q Consensus 252 ~----~~~~~~~~~~~~~~--------~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~ 317 (616)
+ ++..+......... .......|.|.++...|.|.|+|.|.|..|....++.|.|..+|.++...+
T Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~v 227 (241)
T 3grw_A 150 KHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEELV 227 (241)
T ss_dssp EECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-----------
T ss_pred EcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCccce
Confidence 9 77766543321111 111245899999999999999999999999999999999998888776543
No 125
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.77 E-value=1.8e-17 Score=145.50 Aligned_cols=119 Identities=16% Similarity=0.206 Sum_probs=81.8
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc-eeEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP-TKEWL 251 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~-~~~W~ 251 (616)
.|.|.+++..|.|.|+|.|.|..|...... ..+.+ ..+|.+. ..+....+..|+.+.|.|.+.+.|.+ .+.|+
T Consensus 61 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~--~~l~V---~~~p~~~-~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~ 134 (182)
T 1rhf_A 61 FLSLKSVERSDAGRYWCQVEDGGETEISQP--VWLTV---EGVPFFT-VEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWW 134 (182)
T ss_dssp EEEESSCCGGGCEEEEEEESSCTTCEECCC--EEEEE---ECSCEEE-ECCCCEEECTTCCEEEEEEEECSSSCCEEEEE
T ss_pred EEEEeecCcccCeEEEEEEEcCCCcEEEEE--EEEEE---ecCCeEE-ecCcceEecCCCEEEEEeEecCCCCCCEEEEE
Confidence 456666666667777777666544211111 11221 1345553 23455788999999999999999999 99999
Q ss_pred ECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCce-eeEEEEE
Q psy12426 252 CNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK-GTAKVTV 306 (616)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~-~~~~l~v 306 (616)
+++..+..... ....|.|.++ .|.|.|+|.|.|..|... .++.|.|
T Consensus 135 ~~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 135 RGTTKIGGPAP-------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp ETTEECSCSEE-------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCCeECCCCCC-------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 99988754321 3458999998 488999999999988774 3666654
No 126
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.76 E-value=8.1e-18 Score=154.10 Aligned_cols=140 Identities=17% Similarity=0.267 Sum_probs=91.5
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccc-cCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK-KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWL 251 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~-~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~ 251 (616)
.|.|.++...|.|.|+|.|.|..|..... ..+.+... ..+|.+....+....+..|+.+.|.|.+.+.|.+.+.|+
T Consensus 77 ~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~---~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~ 153 (231)
T 3ojm_B 77 SLIMESVVPSDKGNYTCVVENEYGSINHT---YHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWI 153 (231)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEE---EEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEE
T ss_pred eEEEecCCcccCEEEEEEEecccCccccc---EEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEE
Confidence 45555555566666666665554432111 11111111 123444344456788999999999999999999999999
Q ss_pred E----CCeeecccCc--EEEEe-----cCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCC
Q psy12426 252 C----NDITIISKDR--FKIVN-----DDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEG 315 (616)
Q Consensus 252 ~----~~~~~~~~~~--~~~~~-----~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~ 315 (616)
+ ++..+..+.. ..... ......|.|.++...|.|.|+|.|.|..|....++.+.+..+|.+|..
T Consensus 154 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~~ 228 (231)
T 3ojm_B 154 KHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPGR 228 (231)
T ss_dssp EECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-----
T ss_pred ECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCcc
Confidence 9 7766643322 11111 122357999999999999999999999999999999999998888764
No 127
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.76 E-value=5.3e-18 Score=149.94 Aligned_cols=81 Identities=23% Similarity=0.419 Sum_probs=68.8
Q ss_pred ceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy12426 225 DIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 304 (616)
Q Consensus 225 ~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l 304 (616)
...+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+... ...|.|.++...|.|.|+|.|.|..|....++.+
T Consensus 107 ~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 184 (189)
T 2v5t_A 107 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGS--NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFL 184 (189)
T ss_dssp EEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETT--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecC--CCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEE
Confidence 34566899999999999999999999999999877776665533 3489999999999999999999999988877777
Q ss_pred EEe
Q psy12426 305 TVL 307 (616)
Q Consensus 305 ~v~ 307 (616)
.|.
T Consensus 185 ~V~ 187 (189)
T 2v5t_A 185 QVF 187 (189)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 128
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.76 E-value=2.8e-17 Score=147.57 Aligned_cols=184 Identities=22% Similarity=0.220 Sum_probs=133.8
Q ss_pred cCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc---cccceE--EeccccCCCeEEEE
Q psy12426 308 DIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD---VSGTYT--RAENLIEGHDYNFR 382 (616)
Q Consensus 308 ~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~---~~~~~~--~i~~L~~~~~y~~~ 382 (616)
.+|.+|.+ +.+.......+.++|+++... +. ...|.|+++..+...|..+.. .....+ .+.+|.+.+.|.|+
T Consensus 2 ~pP~~P~n-l~c~~~~~~~~~c~W~p~~~~-~~-~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~ 78 (210)
T 3n06_B 2 LPPGKPEI-FKCRSPNKETFTCWWRPGTDG-GL-PTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMM 78 (210)
T ss_dssp CCCCCCEE-EEEEBSSSSCEEEEEECCSSS-CC-CSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEE
T ss_pred CCCCCCeE-eEEEeCCCCeEEEEECCCCCC-CC-CceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEE
Confidence 35667776 677777888999999976543 32 468999998876667877643 122334 44579999999999
Q ss_pred EEEEecCcCCCCccccCCEEccC-CCCCCCCCCCCEEEEec----CCeEEEEecCCCCCC---CCcceeEEEEEeeCCC-
Q psy12426 383 VKAVNKIGESLPLVCQSPITAKD-PFGRPDRPGQPTVTDWG----KDHVDLEWTPPKKDG---GSPISQYIIEKKPKYG- 453 (616)
Q Consensus 383 v~a~n~~g~~~~~~~s~~~~~~~-~~~~p~~p~~~~~~~~~----~~~v~l~W~~p~~~~---~~~i~~Y~i~~~~~~~- 453 (616)
|.|.|..|.+.. ..+.+.. ...+|++|.++.+.... .+++.|+|.+|.... +..+.+|+|+|+..++
T Consensus 79 V~A~N~~G~~~s----~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~ 154 (210)
T 3n06_B 79 VNATNQMGSSFS----DELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAA 154 (210)
T ss_dssp EEEEETTEEEEC----CCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCS
T ss_pred EEEEcCCCCeeC----CcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCC
Confidence 999999997642 2222221 23468888888887653 589999999876533 2246899999998766
Q ss_pred CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCC-CCCCCCCCC
Q psy12426 454 PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGP-GEPSKASAP 500 (616)
Q Consensus 454 ~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~-g~~s~~~~~ 500 (616)
.|.... ......+.|.+|.|++.|.|+|+|.+..|. |++|....+
T Consensus 155 ~~~~~~--~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~ 200 (210)
T 3n06_B 155 EWEIHF--AGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFI 200 (210)
T ss_dssp SCEEEE--EETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEE
T ss_pred CCEEEe--ccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeE
Confidence 776543 344679999999999999999999998775 666654433
No 129
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.75 E-value=3.5e-18 Score=165.07 Aligned_cols=249 Identities=11% Similarity=0.073 Sum_probs=145.9
Q ss_pred CCccCCCCCCceEecC-CCeEEEEEEEeee-c-CCeeeeeeCCeeee----------------------e-------ccc
Q psy12426 1 APHIDRRHLGDIKLSA-GTTLKFDANIIGE-P-VPHVDWRAGGNPLN----------------------L-------RPI 48 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~-g~~v~l~C~~~g~-P-~p~v~W~~~~~~l~----------------------~-------~G~ 48 (616)
||.+...++....+.. |+.+.|.|.+.|. | .+.|+|+|||..+. + +|.
T Consensus 7 ~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~ 86 (323)
T 2wqr_A 7 PPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRT 86 (323)
T ss_dssp CCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCC
T ss_pred CCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCc
Confidence 4666544333332333 2699999999986 4 47899999987642 0 699
Q ss_pred eEEEeecCCCCCceeEeeecc--CCccc-eeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeec
Q psy12426 49 WEKCAQTEGDTPKGKVLDLIE--GNHPI-WEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA 125 (616)
Q Consensus 49 Y~C~a~n~~~~~~~~v~~~~~--~~~p~-w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~ 125 (616)
|+|.|.|..+.....+..+.. ...|. +... .. ...+..|+...+.|.+.
T Consensus 87 Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~------p~---~~~v~~G~~v~L~C~~~------------------- 138 (323)
T 2wqr_A 87 YTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSR------PS---PFDLFIRKSPTITCLVV------------------- 138 (323)
T ss_dssp EEEEEEETTEEEEEEECCCCCSSGGGCEEEECC------CC---HHHHHTSSCCEEEEEEE-------------------
T ss_pred EEEEEEeCCCCcceeeecCCCCCCCCCEEEEcC------CC---HHHhccCCeEEEEEEEe-------------------
Confidence 999999975432222211100 00111 1110 00 01256788899999987
Q ss_pred CCCceeeeecC-ccc---ccEEEEeeccCcccccccCCCceEecccCC---CCCeEEeecccCCCeEEEEEEEEeCCCCC
Q psy12426 126 KKGKCYHLVGT-LLK---DSIYEQLKRSGLFDQFHLCPIWEKCAQTEG---DTPKGKVLDLIEGNQYEFRVLAVNKGGPG 198 (616)
Q Consensus 126 ~~p~~~~~~g~-p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~~~y~c~a~n~~g~~ 198 (616)
|. |.+ .+.|++ ++|... ............+ ....|.|.+++.+|.|.|+|.|.|..+..
T Consensus 139 ---------g~~P~p~~~~i~W~k--~~g~~~---~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~ 204 (323)
T 2wqr_A 139 ---------DLAPSKGTVQLTWSR--ASGKPV---NHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPR 204 (323)
T ss_dssp ---------EECCCSSCCEEEEEE--TTCCCC---CCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred ---------ccCCCCCceEEEEEE--CCCccc---ccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCC
Confidence 43 334 688988 543221 1111111000011 12369999999999999999999876422
Q ss_pred CCCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc-eeEEEECCeeecccCcEE---EEecCC
Q psy12426 199 EPSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-TKEWLCNDITIISKDRFK---IVNDDK 270 (616)
Q Consensus 199 ~~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~~~W~~~~~~~~~~~~~~---~~~~~~ 270 (616)
. ..+.+.. ...+|.+....+....+ .|+.+.|.|.+.+. |.+ .+.|++++..+....... ....++
T Consensus 205 ~-----~~~~v~~~~~~~~~P~v~~~~~~~~~~-~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g 278 (323)
T 2wqr_A 205 A-----LMRSTTKTSGPRAAPEVYAFATPEWPG-SRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGS 278 (323)
T ss_dssp C-----EEEEECCCCSCCBCCEEEEEECCCCTT-CTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSS
T ss_pred C-----eeeEEEccCCCCCCCEEEEeCCChHHh-cCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCC
Confidence 1 1122211 23456554222221112 39999999999985 433 799999999875432111 111111
Q ss_pred ----ceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 271 ----STKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 271 ----~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
...|.|..+...|.|.|+|.|.|..+.
T Consensus 279 ~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 279 GFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp SEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 247889998888999999999997665
No 130
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.75 E-value=4.5e-17 Score=146.87 Aligned_cols=93 Identities=23% Similarity=0.433 Sum_probs=79.5
Q ss_pred CceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEec-CCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 216 PYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVND-DKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 216 P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
|.+....+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+... +....|.|.++...|.|.|+|.|.|.
T Consensus 117 p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~ 196 (212)
T 2r15_A 117 ARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNK 196 (212)
T ss_dssp CEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcC
Confidence 44444455678899999999999999999999999999999987777777655 55679999999999999999999999
Q ss_pred CCCceeeEEEEEec
Q psy12426 295 WGTDKGTAKVTVLD 308 (616)
Q Consensus 295 ~g~~~~~~~l~v~~ 308 (616)
.|.....+.+.+..
T Consensus 197 ~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 197 YGSETSDFTVSVFI 210 (212)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCcEEEEEEEEEEc
Confidence 99888888887763
No 131
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.75 E-value=3.1e-17 Score=148.42 Aligned_cols=185 Identities=16% Similarity=0.162 Sum_probs=130.8
Q ss_pred CccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecccc
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQT 81 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~ 81 (616)
|+|.. .|+++.+.+|+.+.|.|.+.|.|.|.|+|+|++..+.
T Consensus 19 ~~i~~-~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~------------------------------------- 60 (218)
T 3k0w_A 19 SKITV-NPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIP------------------------------------- 60 (218)
T ss_dssp CCEEE-CCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECT-------------------------------------
T ss_pred CEEEE-CCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECC-------------------------------------
Confidence 45654 4889999999999999999999999999999998776
Q ss_pred CCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCcccccccCCCc
Q psy12426 82 EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHLCPIW 161 (616)
Q Consensus 82 ~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~ 161 (616)
......|.|.++...|.|.|+|.|.|..|.....
T Consensus 61 ~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~---------------------------------------------- 94 (218)
T 3k0w_A 61 NGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQ---------------------------------------------- 94 (218)
T ss_dssp TCCSSEEEETTCCGGGCEEEEEEEECTTCCEECC----------------------------------------------
T ss_pred CCCCCEEEEccCChhhCeEeEEEEEcCCCCceee----------------------------------------------
Confidence 2224678999999999999999998654411000
Q ss_pred eEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEe
Q psy12426 162 EKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVI 241 (616)
Q Consensus 162 ~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~ 241 (616)
...+.+...... ...... .....+|.+ ...+....+..|+.+.|.|.+.
T Consensus 95 ---------~~~l~V~~~~~~------------~~~~~~---------~~~~~~p~~-~~~~~~~~v~~G~~v~L~C~~~ 143 (218)
T 3k0w_A 95 ---------WSQLDVCDIPES------------FQRSVD---------GVSESKLQI-CVEPTSQKLMPGSTLVLQCVAV 143 (218)
T ss_dssp ---------CEEEEEECCCGG------------GCTTCC---------SBCCSSCEE-EECCCCEEECTTCCEEEECEEE
T ss_pred ---------EEEEEEEccCcc------------cccccc---------cccCCCceE-EECCCceeecCCCcEEEEEEec
Confidence 001222211100 000000 001122333 2334567889999999999999
Q ss_pred eecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCC-ceeeEEEEEecCC
Q psy12426 242 GEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGT-DKGTAKVTVLDIP 310 (616)
Q Consensus 242 ~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~-~~~~~~l~v~~~p 310 (616)
+.|.+.+.|++++..+.... ...|.|.++...|.|.|+|.|.|..|. .+..+.+.|...+
T Consensus 144 g~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~ 204 (218)
T 3k0w_A 144 GSPIPHYQWFKNELPLTHET---------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 204 (218)
T ss_dssp BSSCCEEEEEETTEECTTCC---------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC--
T ss_pred ccCCCeEEEEECCEECCCCC---------CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCc
Confidence 99999999999998875432 238999999999999999999998887 4667777776543
No 132
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.75 E-value=2.4e-17 Score=147.31 Aligned_cols=189 Identities=15% Similarity=0.197 Sum_probs=126.5
Q ss_pred CccCCCCCCceEecCCCeEEEEEE-EeeecC-CeeeeeeCCeeeee--ccceEEEeecCCCCCceeEeeeccCCccceee
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDAN-IIGEPV-PHVDWRAGGNPLNL--RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEK 77 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~-~~g~P~-p~v~W~~~~~~l~~--~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~ 77 (616)
|.+....+.++.+.+|+.+.|.|. +.|.|. +.|+|+|++..+.. .+...-
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~-------------------------- 61 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFV-------------------------- 61 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEE--------------------------
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEE--------------------------
Confidence 556667789999999999999999 999999 99999999976641 111000
Q ss_pred ccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCccccccc
Q psy12426 78 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHL 157 (616)
Q Consensus 78 ~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~ 157 (616)
......|.|.++...|.|.|+|.+.|..+.... .. .
T Consensus 62 ----~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~-----------------------------~~--~--------- 97 (201)
T 3s97_C 62 ----SQTNGNLYIANVEASDKGNYSCFVSSPSITKSV-----------------------------FS--K--------- 97 (201)
T ss_dssp ----CTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEE-----------------------------EC--C---------
T ss_pred ----EcCCCeEEECcCCcccCeEEEEEEEecCCCcch-----------------------------hh--c---------
Confidence 112345666666666666677666643221000 00 0
Q ss_pred CCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEE
Q psy12426 158 CPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFD 237 (616)
Q Consensus 158 ~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~ 237 (616)
.+.+.. .. . . .....+|.+.... ....+..|+.+.|.
T Consensus 98 ---------------~~~~~~-----------~~--~-~-------------~~~~~~p~~~~~~-~~~~~~~g~~~~l~ 134 (201)
T 3s97_C 98 ---------------FIPLIP-----------IP--E-R-------------TTKPYPADIVVQF-KDVYALMGQNVTLE 134 (201)
T ss_dssp ---------------CEEEEE-----------EC--C-S-------------SCCCEEEEEEEEC-CCEEEETTCCEEEE
T ss_pred ---------------ccceee-----------cc--c-c-------------ccCCCCCceEecC-CceEEecCCcEEEE
Confidence 000000 00 0 0 0001234443332 36788999999999
Q ss_pred EEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy12426 238 INVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 307 (616)
Q Consensus 238 c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 307 (616)
|.+.+.|.+.+.|++++..+.... .+.. ....|.|.++...|.|.|+|.|.|..|.....+.+.|.
T Consensus 135 C~~~g~p~p~v~W~~~~~~~~~~~--~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 135 CFALGNPVPDIRWRKVLEPMPSTA--EIST--SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEEEESCCEEEEEETTBCCCTTC--EEET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEccCCCCCceEEEeCCCcCCCce--eecC--CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 999999999999999998765442 2222 23489999999999999999999999988888887765
No 133
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.74 E-value=2.8e-17 Score=148.35 Aligned_cols=155 Identities=25% Similarity=0.387 Sum_probs=120.8
Q ss_pred CCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEe-----------ecCCccEEEcCCCCCC
Q psy12426 410 PDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACI-----------VPANITATSVPDLKEG 476 (616)
Q Consensus 410 p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~-----------~~~~~~~~~l~~L~p~ 476 (616)
+.+|.++++..++.+++.|+|.+|...+ +++.+|.|+|+..+. .|..... .......+++.+|.|+
T Consensus 2 ~~pP~~~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 80 (214)
T 2ibg_A 2 TYPPTPPNVTRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 80 (214)
T ss_dssp CCCCCCCEEEEEETTEEEEEEEEECCSS-CCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred CCCCCCCEeeEecCCEEEEEEECCCCCC-CCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCC
Confidence 4567788888899999999999876655 479999999998643 6765431 1134678999999999
Q ss_pred CeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecC
Q psy12426 477 EEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNV 556 (616)
Q Consensus 477 t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (616)
+.|.|+|+|+|..|.|..+..+..+++... .| ..+
T Consensus 81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~--~~-------------------------------------------~~~ 115 (214)
T 2ibg_A 81 HTYRFRILAVYSNNDNKESNTSAKFYLQPG--AA-------------------------------------------LDP 115 (214)
T ss_dssp CEEEEEEEEEETTSCEEECCCCCCEECCCS--TT-------------------------------------------SCC
T ss_pred CEEEEEEEEEecCCCCCCCCCcccEEeccC--cC-------------------------------------------CCC
Confidence 999999999999999988876665554321 01 023
Q ss_pred CCCCCCCeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEeecCC-CCeEEccCCc
Q psy12426 557 PGKPSKPEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRERTS-GRWIKITPDP 610 (616)
Q Consensus 557 ~~~P~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~w~~~~~~~ 610 (616)
+.+|.++.+...+.++|.|+|++|..+.++.|.+|.|.|+..+. ++|..+....
T Consensus 116 ~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~ 170 (214)
T 2ibg_A 116 MPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEG 170 (214)
T ss_dssp CCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEEC
T ss_pred CCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeeccC
Confidence 55677788888899999999999865568999999999998887 7898775543
No 134
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.74 E-value=4.6e-17 Score=143.85 Aligned_cols=124 Identities=15% Similarity=0.288 Sum_probs=79.9
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.++...|.|.|+|.|.|..|..... .+.+. ...+|.+. ..+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 59 ~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~----~~~l~-v~~~p~~~-~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~ 132 (189)
T 2v44_A 59 RLTIYNANIEDAGIYRCQATDAKGQTQEA----TVVLE-IYQKLTFR-EVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLY 132 (189)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTSCEEEE----EEEEE-EECCCEEE-SCCCSEEEETTSCEEECCEEECSSCCEEEEEE
T ss_pred EEEEccCCcccCeEEEEEEEeCCCCcEEE----EEEEE-EecCCcee-ecCCcEEEeCCCCEEEEEEECcCCCCcEEEEE
Confidence 44555555555555555555544432110 01111 11233332 23345678899999999999999999999999
Q ss_pred CCeeec--ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEE
Q psy12426 253 NDITII--SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVT 305 (616)
Q Consensus 253 ~~~~~~--~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~ 305 (616)
++..+. ...++.+...+ .|.|.++...|.|.|+|.|.|..|.......+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~ 184 (189)
T 2v44_A 133 HNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDII 184 (189)
T ss_dssp EC--CEECCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEE
T ss_pred CCcEEeccCCCCEEEecCC---cEEEEEcCcccCeEEEEEEEccccCceeeeeEE
Confidence 988765 24455554333 899999999999999999999887665444443
No 135
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.74 E-value=2.3e-17 Score=146.06 Aligned_cols=124 Identities=12% Similarity=0.169 Sum_probs=89.7
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.++..+|.|.|+|.|.|..|..... .+.+. ...+|.+ ...+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 63 ~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~----~~~l~-v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~ 136 (191)
T 1epf_A 63 TLTIYNANIDDAGIYKCVVTAEDGTQSEA----TVNVK-IFQKLMF-KNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKH 136 (191)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEEEE----EEEEE-EECCSEE-EECCSSEECCTTSCEEECCEEECSSCCEEEEEE
T ss_pred EEEEccCCcccCEEEEEEEEcCCCcceEE----EEEEE-eecCceE-ecCCCcEeecCCCeEEEEEEECCCCCCEEEEEE
Confidence 67888888888888888888876421111 12111 1234555 334456778899999999999999999999999
Q ss_pred CCeeeccc--CcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEE
Q psy12426 253 NDITIISK--DRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVT 305 (616)
Q Consensus 253 ~~~~~~~~--~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~ 305 (616)
++..+... .++.....+ .|.|.++...|.|.|+|.|.|..+.......+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~ 188 (191)
T 1epf_A 137 KGRDVILKKDVRFIVLSNN---YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQ 188 (191)
T ss_dssp TTEEGGGGCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEE
T ss_pred CCEEeeccCCceEEEecCC---eEEECCCChhhCEEEEEEEEEecceeEEEEEEE
Confidence 99987543 344443333 799999999999999999999876554444443
No 136
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.73 E-value=1.1e-16 Score=153.61 Aligned_cols=234 Identities=13% Similarity=0.109 Sum_probs=149.2
Q ss_pred CCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEe-cC
Q psy12426 311 SPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVN-KI 389 (616)
Q Consensus 311 ~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n-~~ 389 (616)
.+|.+ +.+.......+.|+|.+|.......+..|.+.+.......+ ....+.+.++.++..|.++|+|.+ ..
T Consensus 5 ~pP~n-l~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~~~~~~------~~~~~~~~~~~~~~~y~~~V~a~~~~~ 77 (314)
T 3bpo_C 5 PPVTN-LSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKI------APETRRSIEVPLNERICLQVGSQCSTN 77 (314)
T ss_dssp CCCEE-EEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC--CCCEE------ESSSEEEEECCCSSCEEEEEEECC---
T ss_pred CCCcc-eEEEeCCceEEEEEEcCCCCCCCCceEEEEEEecccCceEe------ccccEEEEEEcCCCcEEEEEEEEecCC
Confidence 45665 77777778899999998766534466788887744211111 123355677888999999999954 45
Q ss_pred cCCCCccccCCEEcc-CCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeE--eecCCc
Q psy12426 390 GESLPLVCQSPITAK-DPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKAC--IVPANI 465 (616)
Q Consensus 390 g~~~~~~~s~~~~~~-~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~--~~~~~~ 465 (616)
|.+..+.... ..+. ....+|.+|.++.+...+.+++.++|.++... + .+..|.|+|+..+. .+..+. ...+..
T Consensus 78 ~~g~~s~~~~-~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~-~-~~~~Y~l~y~~~~~~~~~~C~~~~~~~~~ 154 (314)
T 3bpo_C 78 ESEKPSILVE-KCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNT-S-PDTNYTLYYWHRSLEKIHQCENIFREGQY 154 (314)
T ss_dssp ------CCEE-EEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC-----CCCCEEEEEEESSCSSCEECCCEEEETTE
T ss_pred CCCCCCcCee-eeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCC-C-CCccEEEEEEeCCCCccccCcCeecCCCe
Confidence 5554432222 1222 22356678889998888899999999976543 3 37889999877653 444432 122345
Q ss_pred cEEEcCCCC----CCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeecc
Q psy12426 466 TATSVPDLK----EGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLN 541 (616)
Q Consensus 466 ~~~~l~~L~----p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 541 (616)
..+.+..+. ..+.|.|+|.|.|..|.+..+. ......
T Consensus 155 ~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~~----~~~~~~----------------------------------- 195 (314)
T 3bpo_C 155 FGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSF----NIVPLT----------------------------------- 195 (314)
T ss_dssp EEEEEECCC--------CCEEEEEEETTSCSCCEE----EEECSS-----------------------------------
T ss_pred EEEEECCCCccccceeEEEEEEEEEcCCCceeccc----EEEehh-----------------------------------
Confidence 677777766 3789999999999998875332 111100
Q ss_pred ccccceeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCCCeEEc
Q psy12426 542 EGLKSMVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRERTSGRWIKI 606 (616)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~w~~~ 606 (616)
....|++|.++++. ...+++.|+|++|.. .++.+.+|+|+|++.++.+|...
T Consensus 196 -----------~~v~P~pP~~l~~~-~~~~~l~lsW~~P~~-~~~~~l~Yev~y~~~~~~~w~~~ 247 (314)
T 3bpo_C 196 -----------SRVKPDPPHIKNLS-FHNDDLYVQWENPQN-FISRCLFYEVEVNNSQTETHNVF 247 (314)
T ss_dssp -----------SSEECCCCEEEEEE-EETTEEEEEEECCTT-CCGGGEEEEEEEEC--CCCEEEE
T ss_pred -----------heEeeCCCCEEEEE-EcCCcEEEEEeCCCc-cCCceEEEEEEEEECCCCcceEE
Confidence 01347899988886 788999999999864 25668999999999888889753
No 137
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.73 E-value=2.5e-15 Score=144.68 Aligned_cols=135 Identities=10% Similarity=0.080 Sum_probs=101.1
Q ss_pred eEEEecCCC-CCCcEEEEEEEEcCCCCcee-eEEEEE--ecCCCCCCCCccceeecC--CeEEEEEeCCCCC-CCCceEE
Q psy12426 272 TKLKVFDSK-RGDSGIYTLAVKNSWGTDKG-TAKVTV--LDIPSPPEGPLKPSNITK--SSCNLEWRAPRDD-GGTDILH 344 (616)
Q Consensus 272 ~~l~i~~l~-~~~~g~y~c~a~n~~g~~~~-~~~l~v--~~~p~~p~~~~~~~~~~~--~~~~l~W~~~~~~-~~~~i~~ 344 (616)
..+.|..+. ....|.|+|.|.|..|.... ...+.. ..+|.+|.+ +.+..... ..+.|+|.+|... .+..+..
T Consensus 155 ~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~-l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~ 233 (325)
T 1n26_A 155 FSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPAN-ITVTAVARNPRWLSVTWQDPHSWNSSFYRLR 233 (325)
T ss_dssp EEEEECCCTTCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEE-EEEEECTTCTTCEEEEEECCTTCCCSSSCEE
T ss_pred EEEEECCCcccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcc-eEEEEecCCCCEEEEEECCCCccCCCcEeEE
Confidence 356676665 56789999999999987532 222222 245667765 55555543 5899999987653 3456899
Q ss_pred EEEEEEeCCCCCEEEccc-cccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCC
Q psy12426 345 YVVEKMDMETGRWVPMGD-VSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPF 407 (616)
Q Consensus 345 y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~ 407 (616)
|.|+|+..+...|..... .....+.+.+|.+++.|.|+|+|.|..|.|.++.++..+...+..
T Consensus 234 Y~V~yr~~~~~~W~~~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~~~ 297 (325)
T 1n26_A 234 FELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPWT 297 (325)
T ss_dssp EEEEEEETTCSCCEEEECGGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECCCC
T ss_pred EEEEEEeCCCCCCEEEcccCCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceecCC
Confidence 999999887778876542 345688999999999999999999999999999999888776433
No 138
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.72 E-value=1.1e-16 Score=144.45 Aligned_cols=132 Identities=17% Similarity=0.207 Sum_probs=93.3
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEE-EeeecCceeEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDIN-VIGEPIPTKEW 250 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~-~~~~p~~~~~W 250 (616)
..|.|.+++..|.|.|+|.|.|..|....+ ....+.+. .+|.+. ..+....+..|+.+.|.|. +.+.|.+.+.|
T Consensus 65 ~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~-~~~~l~V~---~~p~~~-~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W 139 (212)
T 1f97_A 65 SGITFSSVTRKDNGEYTCMVSEEGGQNYGE-VSIHLTVL---VPPSKP-TISVPSSVTIGNRAVLTCSEHDGSPPSEYSW 139 (212)
T ss_dssp TEEEESCCCGGGCEEEEEEEEETTSSSEEE-EEEEEEEE---BCCCCC-EEECCSEEETTSCEEEEEECSCCBSCCEEEE
T ss_pred eeEEEcccCcccCeEEEEEEEccCCCcccE-EEEEEEEE---cCCCCc-ccCCccccCCCCeEEEEEEcccCcCCCEEEE
Confidence 489999999999999999999987722111 11222222 233332 1123457889999999999 78999999999
Q ss_pred EECCe-eecccCcE-------EEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc--eeeEEEEEec
Q psy12426 251 LCNDI-TIISKDRF-------KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD--KGTAKVTVLD 308 (616)
Q Consensus 251 ~~~~~-~~~~~~~~-------~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~--~~~~~l~v~~ 308 (616)
++++. .+...... ..........|.|.++...|.|.|+|.|.|..|.. +..+.+.+..
T Consensus 140 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 140 FKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp EETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred EeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 99998 76543221 12223344589999999999999999999999987 5566666654
No 139
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.72 E-value=1.1e-16 Score=142.09 Aligned_cols=120 Identities=11% Similarity=0.026 Sum_probs=80.8
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.|.|..|....+. ...+.+.....+|.+... +. ..+.+|+.++|.|.+.+. .+.+.|++
T Consensus 59 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~-~~~l~V~~~~~~p~~~~~-~~-~~v~~G~~v~L~C~~~~~-~~~~~w~k 134 (196)
T 3p2t_A 59 RFSIPSMTEDYAGRYRCYYRSPVGWSQPSD-PLELVMTGAYSKPTLSAL-PS-PLVTSGKSVTLLCQSRSP-MDTFLLCK 134 (196)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEBCCCC-CEEEEEECSSCCCEEEEE-SC-SEECTTCCEEEEEEEEEE-EEEEEEEE
T ss_pred EEEeccCCcccCceEEEEEeCCCcccCCCc-cEEEEecCCCCCCEEEeC-Cc-ceecCCCeEEEEEecCCC-CCEEEEEe
Confidence 567777778888888888887766322221 122333333345555322 22 267899999999999885 46899999
Q ss_pred CCeeecccCcE-EEEecCCceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 253 NDITIISKDRF-KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 253 ~~~~~~~~~~~-~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
++..+...... ..........|.|.+++..|.|.|+|.|.|..+
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 135 ERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp TTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred CCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 99876543322 111222345899999999999999999999765
No 140
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.72 E-value=6.7e-19 Score=177.72 Aligned_cols=268 Identities=6% Similarity=-0.067 Sum_probs=148.9
Q ss_pred CCCCCceEecCCCeEEEEEEEeeec--CCeeeeeeCC--eeeeeccceEEEeecCCC-------CCceeEeeeccCCccc
Q psy12426 6 RRHLGDIKLSAGTTLKFDANIIGEP--VPHVDWRAGG--NPLNLRPIWEKCAQTEGD-------TPKGKVLDLIEGNHPI 74 (616)
Q Consensus 6 ~~~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~~--~~l~~~G~Y~C~a~n~~~-------~~~~~v~~~~~~~~p~ 74 (616)
++.+..+.|.+|++|.|.|.+.|.+ .+.|.|+|++ ..+..- ...+..+ ...+++...
T Consensus 3 l~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~R~~~~------- 70 (434)
T 1igy_B 3 LQESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWI-----GYINPSSVYTNYNQRFKDKATLT------- 70 (434)
T ss_dssp EECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEE-----EECCSSSCCCCCCGGGTTTEECC-------
T ss_pred eECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEE-----EEEccCCCceecCccccccEEEE-------
Confidence 3457888999999999999999874 6789999974 322100 0000000 000111100
Q ss_pred eeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCc-------ceeecCCC-------ceee----eecC
Q psy12426 75 WEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP-------HIARAKKG-------KCYH----LVGT 136 (616)
Q Consensus 75 w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~-------~~~~~~~p-------~~~~----~~g~ 136 (616)
.........|.|.+++..|+|.|+|.|.|..+.........+ ..+....| ..+. ..|.
T Consensus 71 ----~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~ 146 (434)
T 1igy_B 71 ----RDRSSNTANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGY 146 (434)
T ss_dssp ----BCGGGCBBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEE
T ss_pred ----EECCCCEEEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeee
Confidence 000122458999999999999999999985432221100000 00110011 1111 1154
Q ss_pred -ccc-ccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc---
Q psy12426 137 -LLK-DSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA--- 211 (616)
Q Consensus 137 -p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~--- 211 (616)
|.+ .+.|++ ++.... ............-.....|.|.++..+| |.|+|.|.|..|..... ..+..
T Consensus 147 ~P~p~~v~W~k--~~~~~~--~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~-----~~~~~~~~ 216 (434)
T 1igy_B 147 FPEPVTVTWNS--GSLSSG--VHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVD-----KKIVPRDC 216 (434)
T ss_dssp BSSCCEEEETT--TTBCSS--EEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEE-----EECCCCCC
T ss_pred cCCCeEEEEee--CCcCCC--eEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccce-----eeccCCCC
Confidence 555 788887 422110 0000000000000001358889999888 99999999988763211 11100
Q ss_pred --------ccCCCceeccCCcceE-EEcCCeEEEEEEEeeec----CceeEEEECCeeecccCcEEEE--ecC---CceE
Q psy12426 212 --------KKVSPYINRDQLSDIK-VRAGSNFEFDINVIGEP----IPTKEWLCNDITIISKDRFKIV--NDD---KSTK 273 (616)
Q Consensus 212 --------~~~~P~~~~~~~~~~~-v~~g~~~~l~c~~~~~p----~~~~~W~~~~~~~~~~~~~~~~--~~~---~~~~ 273 (616)
....|.+....+.... +..|+.+.|.|.+.+.+ .+.+.|++++..+......... ..+ ....
T Consensus 217 ~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (434)
T 1igy_B 217 GCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSA 296 (434)
T ss_dssp CCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCC
T ss_pred CCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEE
Confidence 0111333222222221 77899999999999884 3589999998776432211110 111 1346
Q ss_pred EEecCCCCCCcEEEEEEEEcCCCCce
Q psy12426 274 LKVFDSKRGDSGIYTLAVKNSWGTDK 299 (616)
Q Consensus 274 l~i~~l~~~~~g~y~c~a~n~~g~~~ 299 (616)
|.|.++...|.|.|+|.|.|..|...
T Consensus 297 L~i~~~~~~d~G~Y~C~a~n~~~~~~ 322 (434)
T 1igy_B 297 LPIMHQDWLNGKEFKCRVNSAAFPAP 322 (434)
T ss_dssp EECCHHHHHHTCCCBCCBCCSSCSSC
T ss_pred EEECHHHccCCCcEEEEEECCCCCCc
Confidence 89999999999999999999888653
No 141
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.71 E-value=8.5e-17 Score=143.40 Aligned_cols=170 Identities=8% Similarity=-0.015 Sum_probs=115.1
Q ss_pred CccCCCCCCceEecCCCeEEEEEEEeeecCCe-eeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANIIGEPVPH-VDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~-v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
|.|... |.+..|.+|+.|.|.|.+.|.|.|. |+|+|+|..+..
T Consensus 8 p~i~~~-p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~----------------------------------- 51 (204)
T 3sgj_C 8 AVVFLE-PQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISS----------------------------------- 51 (204)
T ss_dssp CEEEEE-SCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESC-----------------------------------
T ss_pred CeEEEc-CCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEccc-----------------------------------
Confidence 555544 6668899999999999999999886 999999987651
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCcccccccCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHLCPI 160 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~ 160 (616)
....|.|.++...|+|.|+|.|.|... + ..+
T Consensus 52 ---~~~~L~i~~v~~~D~G~Y~C~a~n~~~----s-----------------------~~~------------------- 82 (204)
T 3sgj_C 52 ---QASSYFIDAATVDDSGEYRCQTQLSTL----S-----------------------DPV------------------- 82 (204)
T ss_dssp ---CSSEEEESSCCGGGCEEEEEEETTSBC----C-----------------------CCE-------------------
T ss_pred ---CccEEEEecccccCCEEEEEEeCCCcc----c-----------------------ccE-------------------
Confidence 125678888888888888888764100 0 000
Q ss_pred ceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE
Q psy12426 161 WEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV 240 (616)
Q Consensus 161 ~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~ 240 (616)
.+.+.. +|.+ ... ....+.+|+.+.|.|.+
T Consensus 83 ------------~l~V~~------------------------------------~p~~-~~~-~~~~v~~G~~v~L~C~~ 112 (204)
T 3sgj_C 83 ------------QLEVHI------------------------------------GWLL-LQA-PRWVFKEEDPIHLRCHS 112 (204)
T ss_dssp ------------EEEEEC------------------------------------SSEE-EEC-SCSEEETTCCEEEEEEE
T ss_pred ------------EEEEec------------------------------------CceE-ecC-CceeEeCCCcEEEEEEe
Confidence 111110 0111 000 11457789999999999
Q ss_pred eee-cCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcC-CCCceeeEEEEEecCCCCCC
Q psy12426 241 IGE-PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS-WGTDKGTAKVTVLDIPSPPE 314 (616)
Q Consensus 241 ~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~-~g~~~~~~~l~v~~~p~~p~ 314 (616)
.+. |.+.+.|++++..+... . ....|.|.++...|.|.|+|.|.|. .+..+..+.+.|..+|..|.
T Consensus 113 ~~~~p~~~v~W~k~g~~~~~~-----~---~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P~ 180 (204)
T 3sgj_C 113 WKNTALHKVTYLQNGKGRKYF-----H---HNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVST 180 (204)
T ss_dssp GGGCCCEEEEEEETTEEEEEE-----E---ECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC------
T ss_pred cCCCCCceEEEEECCcEeecc-----c---CCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCCCCc
Confidence 665 56899999999875321 1 1238999999999999999999994 44556777888887765554
No 142
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.71 E-value=7e-17 Score=147.74 Aligned_cols=139 Identities=19% Similarity=0.321 Sum_probs=110.9
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
.+|.+|.++.+...+.+++.|+|.+| + +.+.+|.|+|+..+. .+.. .........++|.+|.|++.|.|+|+|.
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p---~-g~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 78 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPP---S-GKPMGYRVKYWIQGDSESEA-HLLDSKVPSVELTNLYPYCDYEMKVCAY 78 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECC---S-SCCCEEEEEEEETTSCGGGC-EEEEESSSEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECC---C-CccceEEEEEEECCCCccce-EEEcCCccEEEECCCCCCCEEEEEEEEE
Confidence 56788999999999999999999986 2 368999999987765 2221 2233567899999999999999999999
Q ss_pred cCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEE
Q psy12426 487 NKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEAT 566 (616)
Q Consensus 487 n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~ 566 (616)
|..|.|++|......+. ...|.+|.++++.
T Consensus 79 n~~G~g~~s~~~~~~T~--------------------------------------------------~~~P~~P~~l~~~ 108 (234)
T 3f7q_A 79 GAQGEGPYSSLVSCRTH--------------------------------------------------QEVPSEPGRLAFN 108 (234)
T ss_dssp ETTEECCCCCCEEEECC--------------------------------------------------CCCCCCCCCCEEE
T ss_pred eCCCcCCCCCeEEEEcC--------------------------------------------------CCCCCCCCccEEE
Confidence 99999988764432221 2457778899999
Q ss_pred eecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCCC
Q psy12426 567 DVDKDHIKIKWQQPISNGGSAIKGYEVERRERTSGR 602 (616)
Q Consensus 567 ~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~ 602 (616)
..+.++|.|+|++|... +|.|.+|+|.|+..++.+
T Consensus 109 ~~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~ 143 (234)
T 3f7q_A 109 VVSSTVTQLSWAEPAET-NGEITAYEVCYGLVNDDN 143 (234)
T ss_dssp ECSSSCEEEECCCCSCC-SSCCCEEEEEEEEBCTTS
T ss_pred EecCCEEEEEEcCCCCC-CCceeEEEEEEEECCCCC
Confidence 99999999999998653 789999999999776543
No 143
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.71 E-value=5.9e-17 Score=145.77 Aligned_cols=142 Identities=18% Similarity=0.193 Sum_probs=108.1
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCC---CCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKD---GGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRV 483 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~---~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v 483 (616)
.+|.+|.++.+...+.+++.|+|.+|..+ ....+.+|.|+|+..+. .+.. .........++|.+|.|++.|.|+|
T Consensus 3 ~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V 81 (211)
T 3p4l_A 3 LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKY-KNANATTLSYLVTGLKPNTLYEFSV 81 (211)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCC-EEEEESSSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceE-EEeCCCceEEEecCcCCCCEEEEEE
Confidence 35678889999999999999999987532 24568999999998765 2222 2234557899999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCC-CCCCC
Q psy12426 484 IAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVP-GKPSK 562 (616)
Q Consensus 484 ~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~ 562 (616)
+|.|..|.|++|......+.. ..| .+|.+
T Consensus 82 ~A~n~~g~~~~S~~~~~~t~~--------------------------------------------------~~P~~~P~~ 111 (211)
T 3p4l_A 82 MVTKGRRSSTWSMTAHGTTFE--------------------------------------------------LVPTSPPKD 111 (211)
T ss_dssp EEEETTEECCCCCCEEEECCC--------------------------------------------------CCCCSCCEE
T ss_pred EEEcCCCCCccceeEeeeccc--------------------------------------------------CCCCCCCcc
Confidence 999999999887654332221 223 37777
Q ss_pred CeEEee--cCCcEEEEeeCCCCCCCCceeeeEEEEeecCCC
Q psy12426 563 PEATDV--DKDHIKIKWQQPISNGGSAIKGYEVERRERTSG 601 (616)
Q Consensus 563 ~~~~~~--~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~ 601 (616)
+++... +.++|.|+|++|.. .||.|.+|+|.|+..++.
T Consensus 112 ~~~~~~~~s~~sv~l~W~~p~~-~~g~i~~Y~v~~~~~~~~ 151 (211)
T 3p4l_A 112 VTVVSKEGKPKTIIVNWQPPSE-ANGKITGYIIYYSTDVNA 151 (211)
T ss_dssp EEEEEETTEEEEEEEEEECCTT-CCSCCCEEEEEEESCTTS
T ss_pred eEEEecCCCCCEEEEEECCCCC-CCCCEEEEEEEEEECCCC
Confidence 777766 47899999998864 478999999999976654
No 144
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.71 E-value=6.1e-17 Score=143.77 Aligned_cols=120 Identities=11% Similarity=-0.035 Sum_probs=71.3
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.|.|..|....+. ...+.+.....+|.+... + ...+.+|+.+.|.|.+.+.| +.+.|++
T Consensus 59 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~-~~~l~V~~~~~~p~i~~~-~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k 134 (196)
T 2d3v_A 59 RFSIPSMTEHHAGRYRCYYYSPAGWSEPSD-PLELVVTGFYNKPTLSAL-P-SPVVTSGENVTLQCGSRLRF-DRFILTE 134 (196)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEECBCCC-CEEEEEECSSCCCEEEC-------------CEEEEEESSCC-SEEEEEE
T ss_pred EEEeccCChhHCeEEEEEEeCCCCcCCcCc-cEEEEecCCCCCCeEEcc-C-CccccCCCcEEEEEEcCCCC-CEEEEEc
Confidence 567777777888888888877665433221 122333332335555322 2 24688999999999999998 8999999
Q ss_pred CCeeecccCcE-EEEe-cCCceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 253 NDITIISKDRF-KIVN-DDKSTKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 253 ~~~~~~~~~~~-~~~~-~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
++..+...... .... ......|.|.+++..|.|.|+|.|.|..+
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 135 EGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp C---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 99876432111 1111 12236899999999999999999999754
No 145
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.71 E-value=9.3e-17 Score=163.19 Aligned_cols=268 Identities=10% Similarity=0.006 Sum_probs=141.9
Q ss_pred CCCceEecCCCeEEEEEEEeeec--CCeeeeeeC--CeeeeeccceEEEe---ecCCCCCceeEeeeccCCccceeeccc
Q psy12426 8 HLGDIKLSAGTTLKFDANIIGEP--VPHVDWRAG--GNPLNLRPIWEKCA---QTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 8 ~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~--~~~l~~~G~Y~C~a---~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
.+..+.+.+|++|.|.|.+.|.| .+.|.|+|+ |+.+..- .|.-.. .+......+++... ..
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~-~~~~~~~~~~~~~~~~~~R~~~~-----------~~ 73 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWM-GWINPYNGNKEFSAKFQDRVTFT-----------AD 73 (457)
T ss_dssp ECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEE-EEEETTTTEEEECTTTTTTEEEE-----------EE
T ss_pred cCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEE-EEEecCCCceecCccccCceEEE-----------Ee
Confidence 46778999999999999999887 778999995 3222100 000000 00000001111100 00
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCC--------C--CCCCCCCcceeec---CCCc--------------eee-
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGP--------G--EPSDPTAPHIARA---KKGK--------------CYH- 132 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~--------~--~~~~~~~~~~~~~---~~p~--------------~~~- 132 (616)
.......|.|.+++..|+|.|+|.|.|..|. . .......+ .+.. ..|. .+.
T Consensus 74 ~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l-~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 152 (457)
T 1hzh_H 74 TSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTV-IVSSASTKGPSVFPLAPSSKSTSGGTAAL 152 (457)
T ss_dssp TTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEE-EECSCCCBCCEEEEECCCSCCCTTCCEEE
T ss_pred CCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEE-EecCCCCCCCeEEecCccccccCCCcEEE
Confidence 0122458999999999999999999998761 0 00000000 1110 1111 111
Q ss_pred ---eecC-cc-cccEEEEeeccCcccccccCCCceEecccCCC----CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCC
Q psy12426 133 ---LVGT-LL-KDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGD----TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP 203 (616)
Q Consensus 133 ---~~g~-p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~ 203 (616)
..|. |. +.+.|++ ++..+. ........ ..++ ...|.|.++..+| |.|+|.|.|..+.....
T Consensus 153 ~C~~~g~~P~~~~v~W~k--~~~~~~----~~~~~~~~-~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~-- 222 (457)
T 1hzh_H 153 GCLVKDYFPEPVTVSWNS--GALTSG----VHTFPAVL-QSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD-- 222 (457)
T ss_dssp EEEEESBBSCCCEEEETT--TTBCTT----EEEEEEEE-CTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEE--
T ss_pred EEEEeEEeCCCeEEEEEe--CCEecc----ceEcCceE-CCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCccee--
Confidence 1255 53 6788887 421110 00011110 1111 1268899999989 99999999976642110
Q ss_pred CCCEEecc--------------ccCCCceeccCCcce-EEEcCCeEEEEEEEeeecCc----eeEEEECCeeecccCcEE
Q psy12426 204 TAPHIARA--------------KKVSPYINRDQLSDI-KVRAGSNFEFDINVIGEPIP----TKEWLCNDITIISKDRFK 264 (616)
Q Consensus 204 ~~~~~~~~--------------~~~~P~~~~~~~~~~-~v~~g~~~~l~c~~~~~p~~----~~~W~~~~~~~~~~~~~~ 264 (616)
..+.... ...+|.+....+... .+..|+.+.|.|.+.+.+.+ .+.|++++..+.......
T Consensus 223 -~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~ 301 (457)
T 1hzh_H 223 -KKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKP 301 (457)
T ss_dssp -EECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEE
T ss_pred -EEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCcccccccccc
Confidence 0000000 012344322222222 25679999999999998653 999999998775332111
Q ss_pred -EEecCCceEEEec---CCCCCC---cEEEEEEEEcCCCCceee
Q psy12426 265 -IVNDDKSTKLKVF---DSKRGD---SGIYTLAVKNSWGTDKGT 301 (616)
Q Consensus 265 -~~~~~~~~~l~i~---~l~~~~---~g~y~c~a~n~~g~~~~~ 301 (616)
....++ .+.+. .+...| .|.|+|.|.|..+.....
T Consensus 302 ~~~~~~g--~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~ 343 (457)
T 1hzh_H 302 REEQYNS--TYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIE 343 (457)
T ss_dssp EEECTTS--CEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEE
T ss_pred ceecCCC--cEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcce
Confidence 111111 22222 234555 899999999875554333
No 146
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.70 E-value=1.4e-15 Score=145.89 Aligned_cols=222 Identities=10% Similarity=0.027 Sum_probs=142.5
Q ss_pred EEecCCCCCCcEEEEEEEEc---CCCCceeeEEEEEe----cCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEE
Q psy12426 274 LKVFDSKRGDSGIYTLAVKN---SWGTDKGTAKVTVL----DIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYV 346 (616)
Q Consensus 274 l~i~~l~~~~~g~y~c~a~n---~~g~~~~~~~l~v~----~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~ 346 (616)
..+..+.+.+.|.+++.|.+ ..|..+......+. .+|.+|.+ +.+.......+.++|.++... ..+..|.
T Consensus 55 ~~~~~~~~~~~y~~~V~a~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~-l~c~~~~~~~~~c~W~~~~~~--~~~~~Y~ 131 (314)
T 3bpo_C 55 RRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTE-LQCIWHNLSYMKCSWLPGRNT--SPDTNYT 131 (314)
T ss_dssp EEEEECCCSSCEEEEEEECC---------CCEEEEECCCCC-CCSSCEE-EEEEEETTTEEEEEEECCC-----CCCCEE
T ss_pred EEEEEEcCCCcEEEEEEEEecCCCCCCCCcCeeeeeecCCCCCCCCCEe-ceEEECCCCeEEEEECCCCCC--CCCccEE
Confidence 44566777888999999843 33433332222221 23344444 566666788999999977554 2478899
Q ss_pred EEEEeCCCCCEEEccc----cccceEEecccc----CCCeEEEEEEEEecCcCCCCccccCCEEcc-CCCCCCCCCCCCE
Q psy12426 347 VEKMDMETGRWVPMGD----VSGTYTRAENLI----EGHDYNFRVKAVNKIGESLPLVCQSPITAK-DPFGRPDRPGQPT 417 (616)
Q Consensus 347 v~~~~~~~~~~~~~~~----~~~~~~~i~~L~----~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~-~~~~~p~~p~~~~ 417 (616)
|.++..+...+..+.. .....+.+..+. ..+.|.|+|.|.|..|.+..+ ...+. .....|++|.+++
T Consensus 132 l~y~~~~~~~~~~C~~~~~~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~----~~~~~~~~~v~P~pP~~l~ 207 (314)
T 3bpo_C 132 LYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPS----FNIVPLTSRVKPDPPHIKN 207 (314)
T ss_dssp EEEEESSCSSCEECCCEEEETTEEEEEEECCC--------CCEEEEEEETTSCSCCE----EEEECSSSSEECCCCEEEE
T ss_pred EEEEeCCCCccccCcCeecCCCeEEEEECCCCccccceeEEEEEEEEEcCCCceecc----cEEEehhheEeeCCCCEEE
Confidence 9987655555555543 223556666655 367899999999998876532 12222 2335689999999
Q ss_pred EEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEe------------ecCCccEEEcCCCCCCCeEEEEEE
Q psy12426 418 VTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACI------------VPANITATSVPDLKEGEEYEFRVI 484 (616)
Q Consensus 418 ~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~------------~~~~~~~~~l~~L~p~t~Y~~~v~ 484 (616)
+. ...+++.|+|.+|...++ .+..|+|+|+..++ .|..... .......++|.+|.|++.|.|+|+
T Consensus 208 ~~-~~~~~l~lsW~~P~~~~~-~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVr 285 (314)
T 3bpo_C 208 LS-FHNDDLYVQWENPQNFIS-RCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIR 285 (314)
T ss_dssp EE-EETTEEEEEEECCTTCCG-GGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEE
T ss_pred EE-EcCCcEEEEEeCCCccCC-ceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEE
Confidence 87 778899999998864333 37899999998776 6754322 124567899999999999999999
Q ss_pred EEcCC----CCCCCCCCCCCEEec
Q psy12426 485 AVNKG----GPGEPSKASAPVTCK 504 (616)
Q Consensus 485 a~n~~----G~g~~s~~~~~~~~~ 504 (616)
|.+.. +.|.+|..+......
T Consensus 286 a~~~~~~~~~~g~WS~WS~~~~~~ 309 (314)
T 3bpo_C 286 VKTNKLCYEDDKLWSNWSQEMSIG 309 (314)
T ss_dssp EEECTTTSCCCCCCCCCCCCEEES
T ss_pred eeecccccCCCCeeCCCCCCeEec
Confidence 99863 355566666655543
No 147
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.70 E-value=5.9e-17 Score=157.88 Aligned_cols=271 Identities=12% Similarity=0.020 Sum_probs=141.8
Q ss_pred CCCCCceEecCCCeEEEEEEEeeec--CCeeeeeeC--CeeeeeccceEEEe----ecCCCCCceeEeeeccCCccceee
Q psy12426 6 RRHLGDIKLSAGTTLKFDANIIGEP--VPHVDWRAG--GNPLNLRPIWEKCA----QTEGDTPKGKVLDLIEGNHPIWEK 77 (616)
Q Consensus 6 ~~~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~--~~~l~~~G~Y~C~a----~n~~~~~~~~v~~~~~~~~p~w~~ 77 (616)
+..|..+.+.+|++|.|.|.+.|.+ .+.|.|+|+ ++.+..-. |. .. .+......+++..
T Consensus 4 l~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~-~~-~~~~~~~~~~~~~~~R~~~----------- 70 (344)
T 1za6_B 4 LVQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIG-YF-SPGNDDFKYNERFKGKATL----------- 70 (344)
T ss_dssp EEECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEE-EE-ETTTTEEEECTTTBTTEEE-----------
T ss_pred eeCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEE-EE-ecCCCceEECcccCCcEEE-----------
Confidence 3457788999999999999999874 678999997 44332100 00 00 0000000011110
Q ss_pred ccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCC-------cceeecCCC-------ceee----eecC-cc
Q psy12426 78 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTA-------PHIARAKKG-------KCYH----LVGT-LL 138 (616)
Q Consensus 78 ~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~-------~~~~~~~~p-------~~~~----~~g~-p~ 138 (616)
.........+|.|.+++..|+|.|+|.|.|..+......... ...+....| ..+. ..|. |.
T Consensus 71 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 150 (344)
T 1za6_B 71 TADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 150 (344)
T ss_dssp EEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSS
T ss_pred EEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECC
Confidence 000012345899999999999999999998543221110000 001111111 1112 1254 54
Q ss_pred -cccEEEEeeccCcccccccCCCceEecccCC---CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCC-CCCCE------
Q psy12426 139 -KDSIYEQLKRSGLFDQFHLCPIWEKCAQTEG---DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSD-PTAPH------ 207 (616)
Q Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~-~~~~~------ 207 (616)
+.+.|++ ++..+. .. .........+ ....|.|.++..+| |.|+|.|.|..|...... ....+
T Consensus 151 ~~~v~W~k--~g~~~~--~~--~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~ 223 (344)
T 1za6_B 151 PVTVSWNS--GALTSG--VH--TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHT 223 (344)
T ss_dssp CCCEEETT--TTBCTT--EE--ECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC-----
T ss_pred CeEEEEec--CCccCc--ee--ECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccc
Confidence 6899987 422111 00 0000000001 01268888888877 999999999877421100 00000
Q ss_pred --------E---eccccCCCceeccCCcceEEEcCCeEEEEEEEeee-c-CceeEEEECCeeecccCcEEE--EecCC--
Q psy12426 208 --------I---ARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-P-IPTKEWLCNDITIISKDRFKI--VNDDK-- 270 (616)
Q Consensus 208 --------~---~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p-~~~~~W~~~~~~~~~~~~~~~--~~~~~-- 270 (616)
. ......+|.+....+.... ..|..+.|.|.+.|. | .+.+.|++++..+........ ..++.
T Consensus 224 ~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~ 302 (344)
T 1za6_B 224 CPPCGGGSSGGGSGGQPREPQVYTLPPSRDE-LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFF 302 (344)
T ss_dssp ---------------CCBCCEEEEECCCGGG-GGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEE
T ss_pred cCCCCCCccccccCCCCcCCEEEEeCCChHh-ccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEE
Confidence 0 0112345655433222222 246679999999996 3 358999999987653322111 11121
Q ss_pred -ceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 271 -STKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 271 -~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
...|.|......|.|.|+|.|.|....
T Consensus 303 ~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 303 LYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp EEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred EEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 123555555555699999999986543
No 148
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.70 E-value=1.3e-16 Score=143.78 Aligned_cols=136 Identities=14% Similarity=0.026 Sum_probs=83.2
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecC--ceeEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI--PTKEW 250 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~--~~~~W 250 (616)
.|.|.+++.+|.|.|+|.|.|..+. ..+. ...+.+.. ..+|.+....+..+.+..|+.+.|.|.+.+.|. +.+.|
T Consensus 65 ~l~I~~v~~~D~G~Y~C~a~n~~~~-~~s~-~~~l~v~~-~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W 141 (213)
T 2x1w_L 65 GFTIPSYMISYAGMVFCEAKINDES-YQSI-MYIVVVVG-YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNW 141 (213)
T ss_dssp EEEEEGGGTTTCSEEEEEEC----C-EECC-CEEEEECB-CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEE
T ss_pred cEEEccCChhcCceEEEEEEECCee-EEEE-EEEEEEeC-CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEE
Confidence 3556666666666666666553221 1110 01121111 122333344445568999999999999998654 47999
Q ss_pred EECCeeecccCc-EEEEe-------cCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCC
Q psy12426 251 LCNDITIISKDR-FKIVN-------DDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPS 311 (616)
Q Consensus 251 ~~~~~~~~~~~~-~~~~~-------~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~ 311 (616)
++++..+..... ..... ......|.|.+++..|+|.|+|.|.|..|.....+.|.|..+|.
T Consensus 142 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 142 EYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp ECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred EecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 998876432111 10100 11134799999999999999999999999998899999987653
No 149
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.70 E-value=1.6e-16 Score=143.04 Aligned_cols=116 Identities=10% Similarity=0.023 Sum_probs=76.4
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.|.|..|....+. ...+.+.....+|.+... + ...+.+|+.++|.|.+.+.+.+.+.|+|
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~-~~~l~V~~~~~~P~i~~~-p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k 141 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHYRFRYSD-TLELVVTGLYGKPFLSAD-R-GLVLMPGENISLTCSSAHIPFDRFSLAK 141 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEEECC-CEEEEEECSSCCCEEEES-S-CSEECTTCCCEEEEECSSSCCSEEEEEE
T ss_pred EEEEcccccccCEEEEEEEEcCCCceeecC-CEEEEEcCcccCCEEEeC-C-CCccCCCCCEEEEEeCCCCCCCEEEEEE
Confidence 455666666666666666666544222111 112222222344555322 2 3467899999999977788888999999
Q ss_pred CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCC
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSW 295 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 295 (616)
++..+... . ........|.|.+++..|+|.|+|.|.|..
T Consensus 142 ~g~~~~~~--~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 142 EGELSLPQ--H--QSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp TTCSSCCS--E--EECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCCccccc--c--cCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 99876431 1 123445699999999999999999999864
No 150
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.70 E-value=2.9e-17 Score=166.32 Aligned_cols=241 Identities=12% Similarity=0.049 Sum_probs=141.2
Q ss_pred ecCCCeEEEEEEEeee-cCC-eeeeeeCCeeeee--------ccceEEEeecCCCCCceeEeeeccCCccceeeccccCC
Q psy12426 14 LSAGTTLKFDANIIGE-PVP-HVDWRAGGNPLNL--------RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTEG 83 (616)
Q Consensus 14 v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~l~~--------~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~~ 83 (616)
+.+|+.+.|.|.+.|. |.| .|+|+|++..+.. .|.|.+.
T Consensus 135 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 183 (444)
T 1igt_B 135 DTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLS------------------------------- 183 (444)
T ss_dssp CCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEE-------------------------------
T ss_pred CCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEE-------------------------------
Confidence 4799999999999885 877 9999999876321 2444433
Q ss_pred CCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCC---------------------CcceeecCCCc-----------ee
Q psy12426 84 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPT---------------------APHIARAKKGK-----------CY 131 (616)
Q Consensus 84 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~---------------------~~~~~~~~~p~-----------~~ 131 (616)
..|.|.++...| |.|.|.|.|..|........ ....+...+|. .+
T Consensus 184 --s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L 260 (444)
T 1igt_B 184 --SSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIV 260 (444)
T ss_dssp --EEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEE
T ss_pred --EEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEE
Confidence 367888888888 99999999988753110000 01111111221 11
Q ss_pred e--eecCc----ccccEEEEeeccCcccccccCCCceEe-cccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCC
Q psy12426 132 H--LVGTL----LKDSIYEQLKRSGLFDQFHLCPIWEKC-AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPT 204 (616)
Q Consensus 132 ~--~~g~p----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~ 204 (616)
. ..|.+ ...++|++ +++.+... ........ .........|.|.++..+|.|.|+|.|.|..|.....
T Consensus 261 ~C~~~g~~~~p~~~~v~W~k--~~~~~~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~--- 334 (444)
T 1igt_B 261 TCVVVDVSEDDPDVQISWFV--NNVEVHTA-QTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIE--- 334 (444)
T ss_dssp EEEEEEECTTCCCCEEEEEE--TTEECSST-TCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEE---
T ss_pred EEEEeecccCCCCeEEEEEE--CCccccCc-ccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceE---
Confidence 1 22552 35899998 54332200 00000000 0000123479999999999999999999988764211
Q ss_pred CCEEe-ccccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc-eeEEEECCeeecccCcEEE--EecCC---ceEEEe
Q psy12426 205 APHIA-RAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-TKEWLCNDITIISKDRFKI--VNDDK---STKLKV 276 (616)
Q Consensus 205 ~~~~~-~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~~~W~~~~~~~~~~~~~~~--~~~~~---~~~l~i 276 (616)
..+.. .....+|.+....+....+ .+..+.|.|.+.|. |.+ .+.|++++..+........ ..++. .+.|.|
T Consensus 335 ~~v~~~~~~~~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i 413 (444)
T 1igt_B 335 RTISKPKGSVRAPQVYVLPPPEEEM-TKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRV 413 (444)
T ss_dssp EEEECCCCCCBCCEEEEECCCGGGT-TSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEE
T ss_pred EEEeccCCCCCCCEEEEeCCChHHc-cCCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEE
Confidence 11211 1234567664332222222 34459999999984 555 8999999988743211111 11121 124556
Q ss_pred cCCCCCCcEEEEEEEEcCC
Q psy12426 277 FDSKRGDSGIYTLAVKNSW 295 (616)
Q Consensus 277 ~~l~~~~~g~y~c~a~n~~ 295 (616)
......|.|.|+|.|.|..
T Consensus 414 ~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 414 EKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp EHHHHHTCCCEEEEEECTT
T ss_pred ChHHhcCCCeEEEEEECCC
Confidence 5555567899999999864
No 151
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.69 E-value=3.4e-16 Score=136.10 Aligned_cols=165 Identities=8% Similarity=0.004 Sum_probs=114.0
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCe-eeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPH-VDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~-v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
+|.|... |..+.+.+|+.|.|.|.+.|.|.|. ++|+|+|..+..
T Consensus 7 ~p~i~~~-p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~---------------------------------- 51 (175)
T 1fnl_A 7 KAVVFLE-PQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS---------------------------------- 51 (175)
T ss_dssp CCEEEEE-SCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES----------------------------------
T ss_pred CCEEEEc-CCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC----------------------------------
Confidence 3566644 7778899999999999999999887 889999987651
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCcccccccCC
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHLCP 159 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~ 159 (616)
....|.|.++...|.|.|+|.|.|..+ + ..+
T Consensus 52 ----~~~~L~i~~~~~~d~G~Y~C~~~n~~~----s-----------------------~~~------------------ 82 (175)
T 1fnl_A 52 ----QASSYFIDAATVNDSGEYRCQTNLSTL----S-----------------------DPV------------------ 82 (175)
T ss_dssp ----SCSEEEESSCCGGGCEEEEEECSSSCC----C-----------------------CCE------------------
T ss_pred ----CceEEEEeCCCcccCEEEEEEeeCCcc----c-----------------------ccE------------------
Confidence 134677888888888888888764111 0 000
Q ss_pred CceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEE
Q psy12426 160 IWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDIN 239 (616)
Q Consensus 160 ~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~ 239 (616)
.+.+. .+|.+ .. .....+.+|+.+.|.|.
T Consensus 83 -------------~l~V~------------------------------------~~~~~-~~-~~~~~~~~g~~~~l~C~ 111 (175)
T 1fnl_A 83 -------------QLEVH------------------------------------IGWLL-LQ-APRWVFKEEDPIHLRCH 111 (175)
T ss_dssp -------------EEEEE------------------------------------CSSEE-EE-CSCSEEETTCCEEEEEE
T ss_pred -------------EEEEe------------------------------------CCCce-ee-CCCceecCCCCEEEEEE
Confidence 11111 00000 00 01245778999999999
Q ss_pred EeeecCc-eeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCC-ceeeEEEEEec
Q psy12426 240 VIGEPIP-TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGT-DKGTAKVTVLD 308 (616)
Q Consensus 240 ~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~-~~~~~~l~v~~ 308 (616)
+.+.+.+ .+.|++++..+... .....|.|.++...|.|.|+|.|.|..|. .+..+.|.|..
T Consensus 112 ~~~~~~~~~~~W~k~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 112 SWKNTALHKVTYLQNGKDRKYF--------HHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp ECTTCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred cCCCCCceEEEEEECCeEccCC--------CCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 9887664 99999999876321 11248999999999999999999997553 34556666543
No 152
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.69 E-value=4.4e-16 Score=141.81 Aligned_cols=129 Identities=10% Similarity=0.058 Sum_probs=86.3
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCceeE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIPTKE 249 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~~~~ 249 (616)
...|.|.+++..|.|.|+|.|.|..|.... .+.+...... ........+..|..+.|.|.+.+. |.|.+.
T Consensus 82 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~-----~v~~~~~~~~----~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~ 152 (226)
T 4f80_A 82 KAALRIHNVTASDSGKYLCYFQDGDFYEKA-----LVELKVAALG----SDLHVDVKGYKDGGIHLECRSTGWYPQPQIQ 152 (226)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEE-----EEEEEEEBCC----CCCEEEEEEEETTEEEEEEEEEEEBSCCEEE
T ss_pred eEEEEEeeCchHHCeeEEEEEECCCcEEEE-----EEEEeeccce----ecccceeeeccCCceeeEEEeccCCCCCEEE
Confidence 447999999999999999999998775432 1222221111 122345678899999999999985 999999
Q ss_pred EEECCeeecccC-cEEEEe-cCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEec
Q psy12426 250 WLCNDITIISKD-RFKIVN-DDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLD 308 (616)
Q Consensus 250 W~~~~~~~~~~~-~~~~~~-~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~ 308 (616)
|++++..+.... ...... .+....+.+..+...|.|.|+|.|.|..|.....+.+.+.+
T Consensus 153 W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 153 WSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp EECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred EEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 999765443322 222222 22223444556788899999999999999988888887754
No 153
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.68 E-value=4.2e-16 Score=138.64 Aligned_cols=120 Identities=10% Similarity=0.010 Sum_probs=77.7
Q ss_pred eEEeecccCCCeEEEEEEEEeCC-CCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKG-GPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWL 251 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~-g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~ 251 (616)
.|.|.++...|.|.|+|.|.|.. |....+. ...+.+......|.+... ....+.+|+.+.|.|.+.+. .+.+.|+
T Consensus 59 ~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~-~~~l~V~~~~~~p~i~~~--~~~~v~~G~~v~L~C~~~~~-~~~v~W~ 134 (198)
T 1ugn_A 59 QFPIPSITWEHTGRYRCYYGSDTAGRSESSD-PLELVVTGAYIKPTLSAQ--PSPVVNSGGNVTLQCDSQVA-FDGFILC 134 (198)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTTEECCCCC-CEEEEEECSSCCCEEEEE--SCSEEETTCCEEEEEECSSC-CSEEEEE
T ss_pred EEEECCCCHHHCeEEEEEEECCCCCcccCCc-cEEEEEcccccCCccccC--CccccCCCCcEEEEEecCCC-CcEEEEE
Confidence 67777888888888888888776 4322221 122333332334554322 23578899999999999988 7899999
Q ss_pred ECCeeecccC-cEEEE-ecCCceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 252 CNDITIISKD-RFKIV-NDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 252 ~~~~~~~~~~-~~~~~-~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
+++..+.... ++... ..+....|.|.++...|.|.|+|.|.|..+
T Consensus 135 k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 135 KEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred ECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 9998764322 11111 122356999999999999999999999765
No 154
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.68 E-value=2.2e-16 Score=137.44 Aligned_cols=168 Identities=11% Similarity=0.047 Sum_probs=115.4
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCC-eeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVP-HVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
+|.|... |..+.+.+|+.+.|.|.+.|.|.| .|+|+|++..+..
T Consensus 4 ~P~i~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~---------------------------------- 48 (176)
T 1f2q_A 4 KPKVSLN-PPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE---------------------------------- 48 (176)
T ss_dssp CCCCEEE-SSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC----------------------------------
T ss_pred CCEEEcC-CCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC----------------------------------
Confidence 4666644 777889999999999999999886 6999999976651
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCcccccccCC
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHLCP 159 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~ 159 (616)
....|.|.++...|.|.|+|.+.|..+ + ..+
T Consensus 49 ----~~~~L~i~~v~~~d~G~Y~C~~~~~~~----s-----------------------~~~------------------ 79 (176)
T 1f2q_A 49 ----TNSSLNIVNAKFEDSGEYKCQHQQVNE----S-----------------------EPV------------------ 79 (176)
T ss_dssp ----CSSEEEECSCCGGGCEEEEEECTTSSC----C-----------------------CCE------------------
T ss_pred ----CceEEEEeccceecCEEEEEEcCCccc----c-----------------------ccE------------------
Confidence 135777888888888888888754221 0 001
Q ss_pred CceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEE
Q psy12426 160 IWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDIN 239 (616)
Q Consensus 160 ~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~ 239 (616)
.+.+. .++.+ .. .....+..|+.+.|.|.
T Consensus 80 -------------~l~V~------------------------------------~~~~~-~~-~~~~~~~~g~~~~l~C~ 108 (176)
T 1f2q_A 80 -------------YLEVF------------------------------------SDWLL-LQ-ASAEVVMEGQPLFLRCH 108 (176)
T ss_dssp -------------EEEEE------------------------------------CSSEE-EE-ESCSEEETTSCEEEEEE
T ss_pred -------------EEEEe------------------------------------Cccee-ec-CCcceeeCCCCEEEEEE
Confidence 11111 00000 00 11235779999999999
Q ss_pred Ee-eecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCC-CceeeEEEEEecCCC
Q psy12426 240 VI-GEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG-TDKGTAKVTVLDIPS 311 (616)
Q Consensus 240 ~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g-~~~~~~~l~v~~~p~ 311 (616)
+. +.|.+.+.|++++..+... .....|.|.++...|.|.|+|.|.|..+ ..+..+.+.|..+|.
T Consensus 109 ~~~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 109 GWRNWDVYKVIYYKDGEALKYW--------YENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EGGGCCEEEEEEEETTEECCSC--------CCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred ecCCCCceEEEEEECCEEEeee--------cCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 94 6677799999999876321 2234899999999999999999999644 345567788877664
No 155
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.68 E-value=2.7e-17 Score=165.98 Aligned_cols=251 Identities=12% Similarity=0.032 Sum_probs=147.2
Q ss_pred CccCCCCCCceEecCCCeEEEEEEEeee-cCC-eeeeeeCCeeee--------eccceEEEeecCCCCCceeEeeeccCC
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANIIGE-PVP-HVDWRAGGNPLN--------LRPIWEKCAQTEGDTPKGKVLDLIEGN 71 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~l~--------~~G~Y~C~a~n~~~~~~~~v~~~~~~~ 71 (616)
|.|....+.. .+.+|+.+.|.|.+.|. |.| .|+|+|++..+. ..|.|.+.
T Consensus 120 P~i~~~~~~~-~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~------------------- 179 (434)
T 1igy_B 120 PSVYPLAPGS-AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLS------------------- 179 (434)
T ss_dssp CCEEEECCCC-CCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEE-------------------
T ss_pred CeEEEcCCcc-ccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEE-------------------
Confidence 4444332322 35799999999999986 777 999999997532 13445443
Q ss_pred ccceeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCc---------------ceeecCCCc-------
Q psy12426 72 HPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAP---------------HIARAKKGK------- 129 (616)
Q Consensus 72 ~p~w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~---------------~~~~~~~p~------- 129 (616)
..|.|..+...| |.|.|.|.|..|.......... ..+...+|.
T Consensus 180 --------------s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~ 244 (434)
T 1igy_B 180 --------------SSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLI 244 (434)
T ss_dssp --------------EEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHST
T ss_pred --------------EEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhccc
Confidence 357888888888 9999999998886421100000 111111221
Q ss_pred ----eee--eecCc----ccccEEEEeeccCcccccccCCCceEe---cccCCCCCeEEeecccCCCeEEEEEEEEeCCC
Q psy12426 130 ----CYH--LVGTL----LKDSIYEQLKRSGLFDQFHLCPIWEKC---AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGG 196 (616)
Q Consensus 130 ----~~~--~~g~p----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g 196 (616)
.+. ..|.+ ...+.|++ +++.+. ........ .........|.|.++..+|.|.|+|.|.|..|
T Consensus 245 G~~~~L~C~~~g~~p~P~~~~i~W~k--~~~~~~---~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 319 (434)
T 1igy_B 245 TVTPKVTCVVVDISKDDPEVQFSWFV--DNVEVH---TAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAF 319 (434)
T ss_dssp TSCCEEEEEECCCCSSCCCCCBCBBS--SSCCBC---CCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSC
T ss_pred CCCcEEEEEEeccccCCCCeEEEEEe--CCcccC---CcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCC
Confidence 111 22552 34799998 543322 10000000 00111234689999999999999999999888
Q ss_pred CCCCCCCCCCEEe-ccccCCCceeccCCcceEEEcCCeEEEEEEEeeecC--ceeEEEECCeeecccCcEEE--EecCC-
Q psy12426 197 PGEPSDPTAPHIA-RAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI--PTKEWLCNDITIISKDRFKI--VNDDK- 270 (616)
Q Consensus 197 ~~~~s~~~~~~~~-~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~--~~~~W~~~~~~~~~~~~~~~--~~~~~- 270 (616)
...... .+.. .....+|.+....+... ...|+.+.|.|.+.|.++ +.+.|++++..+........ ..++.
T Consensus 320 ~~~~~~---~v~~~~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~ 395 (434)
T 1igy_B 320 PAPIEK---TISKTKGKPRAPQVYTIPPPKE-QMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSY 395 (434)
T ss_dssp SSCCCC---CCCCCCSCCBCCCCEEECCCSS-SSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCE
T ss_pred CCceeE---EEeccCCCCcCCEEEEECCCHH-HhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcE
Confidence 643221 1211 12234566543322221 235678999999998643 38999999987743211111 11111
Q ss_pred --ceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 271 --STKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 271 --~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
.+.|.|......|.|.|+|.|.|...
T Consensus 396 ~~~s~l~i~~~~~~~~g~YtC~a~n~~l 423 (434)
T 1igy_B 396 FVYSKLNVQKSNWEAGNTFTCSVLHEGL 423 (434)
T ss_dssp EEEEEEEEEHHHHHTTCCEEEEEEETTS
T ss_pred EEEEEEEECchhccCCCEEEEEEEcCCC
Confidence 12466666666679999999999654
No 156
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.68 E-value=3.5e-16 Score=137.52 Aligned_cols=137 Identities=21% Similarity=0.362 Sum_probs=106.6
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEc
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVN 487 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n 487 (616)
.+|++|.++++..++.+++.|+|.+|.. .+.+|.|+|+..++.+. ..........++|.+|.|++.|.|+|+|.|
T Consensus 5 t~p~~P~~l~~~~~~~~sv~l~W~~p~~----~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~ 79 (186)
T 1qr4_A 5 TDLDNPKDLEVSDPTETTLSLRWRRPVA----KFDRYRLTYVSPSGKKN-EMEIPVDSTSFILRGLDAGTEYTISLVAEK 79 (186)
T ss_dssp ---CCCEEEEEESCCSSEEEEEEECCSS----CCSEEEEEEECTTCCEE-EEEECTTCSEEEEESCCSSCEEEEEEEEES
T ss_pred CCCcCCCceEEEecCCCEEEEEEeCCCC----CccEEEEEEEeCCCCee-EEECCCCCCEEEECCCCCCCEEEEEEEEEc
Confidence 5788999999999999999999997632 58899999986554333 344566788999999999999999999999
Q ss_pred CCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEEe
Q psy12426 488 KGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEATD 567 (616)
Q Consensus 488 ~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 567 (616)
..|.|.+.. .. ..+.+.+|.++++..
T Consensus 80 ~~~~s~~~~----~~--------------------------------------------------~~t~p~~P~~l~~~~ 105 (186)
T 1qr4_A 80 GRHKSKPTT----IK--------------------------------------------------GSTVVGSPKGISFSD 105 (186)
T ss_dssp SSCBCCCEE----EE--------------------------------------------------EECCCCCCSCEEEES
T ss_pred CCccCCCEE----EE--------------------------------------------------EECCCCCCCccEEEE
Confidence 766654311 11 124578899999999
Q ss_pred ecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCCCeEEcc
Q psy12426 568 VDKDHIKIKWQQPISNGGSAIKGYEVERRERTSGRWIKIT 607 (616)
Q Consensus 568 ~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~w~~~~ 607 (616)
.+.++|.|+|.+|. +.|.+|+|.|+..+++.|..+.
T Consensus 106 ~~~~sv~l~W~~p~----~~i~~Y~v~~~~~~~~~~~~~~ 141 (186)
T 1qr4_A 106 ITENSATVSWTPPR----SRVDSYRVSYVPITGGTPNVVT 141 (186)
T ss_dssp CCSSCEEEEECCCS----SCCSEEEEEEEETTCCCCEEEE
T ss_pred eCCCEEEEEEECCC----CcccEEEEEEEeCCCCCceEEE
Confidence 99999999999883 7799999999988766655443
No 157
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.68 E-value=7.5e-16 Score=147.42 Aligned_cols=252 Identities=16% Similarity=0.127 Sum_probs=154.9
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCcccccccCCCceEecccCCCCC
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTP 172 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (616)
+.+|+...+.|.+. |.|.+.+.|++ ++..+ ............+...
T Consensus 18 v~~G~~v~l~C~~~----------------------------g~p~~~i~W~k--~g~~i----~~~~~~~~~~~~~~~~ 63 (304)
T 2yd9_A 18 GVSGGVASFVCQAT----------------------------GDPKPRVTWNK--KGKKV----NSQRFETIEFDESAGA 63 (304)
T ss_dssp EETTSCEEEEEEEE----------------------------CSSCCEEEEC-------------CTTEEEEEETTTTEE
T ss_pred ecCCCeEEEEEEEE----------------------------EeCCCeEEEEE--CCEEC----CCCceEEEEecCCCce
Confidence 45788899999987 66667899998 53222 1222222212223336
Q ss_pred eEEeecccC-CCeEEEEEEEEeCCCCCCCCCCCCCEEeccccC----CCceeccCCcceEEEcCCeEEEEEEEeeecCce
Q psy12426 173 KGKVLDLIE-GNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKV----SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPT 247 (616)
Q Consensus 173 ~l~i~~l~~-~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~----~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~ 247 (616)
.|.|.++.. .|.|.|+|.|.|..|.... ...+.+..... .|.+. ..+....+..|+.+.|.|.+.+.|.+.
T Consensus 64 ~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~---~~~l~V~~~~~~p~~~p~i~-~~~~~~~v~~g~~v~l~C~~~g~p~~~ 139 (304)
T 2yd9_A 64 VLRIQPLRTPRDENVYECVAQNSVGEITV---HAKLTVLREDQLPSGFPNID-MGPQLKVVERTRTATMLCAASGNPDPE 139 (304)
T ss_dssp EEEECSCCTTTTCSEEEEEEECSSCEECC---EEEEEEECGGGCCTTCCEEE-ECCCCEEEETTSCEEECCEEECSSCCE
T ss_pred EEEEecccccCCCeEEEEEEECCCCeEEE---EEEEEEeccccCCCCCCeee-cCCccEEEeCCCeEEEEEECccCCCCe
Confidence 899999997 9999999999998886321 12233322211 25553 345667889999999999999999999
Q ss_pred eEEEECCeeecccC---cEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceee-EEEEEecCCCCCC---CCccce
Q psy12426 248 KEWLCNDITIISKD---RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT-AKVTVLDIPSPPE---GPLKPS 320 (616)
Q Consensus 248 ~~W~~~~~~~~~~~---~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~-~~l~v~~~p~~p~---~~~~~~ 320 (616)
+.|++++..+.... ++.... ...|.|.++...|.|.|+|.|.|..|..... ..+.+.....+|. .+....
T Consensus 140 v~W~k~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~ 216 (304)
T 2yd9_A 140 ITWFKDFLPVDPSASNGRIKQLR---SGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHE 216 (304)
T ss_dssp EEEEETTEECCGGGGTTSEEECT---TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBC
T ss_pred EEEEECCEECcCCCCcceEEeCC---CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceE
Confidence 99999998876432 332222 2389999999999999999999988865433 4555543222211 111223
Q ss_pred eecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCC-EEEccccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 321 NITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGR-WVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 321 ~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~-~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
...+..+.|.|...... ... +.|...+... ...........+.+.++. +.+.|+|.|.|..|...
T Consensus 217 v~~G~~v~l~C~~~g~p----~p~--v~W~~~~~~l~~~~~~~~~~~~L~i~~~~--d~G~Y~C~a~N~~G~~~ 282 (304)
T 2yd9_A 217 IMPGGNVNITCVAVGSP----MPY--VKWMQGAEDLTPEDDMPVGRNVLELTDVK--DSANYTCVAMSSLGVIE 282 (304)
T ss_dssp CCTTCCEEEEEEEEEES----CCE--EEEEETTEECSCSSSCCBSEEEEEECSCC--SCEEEEEEEEETTEEEE
T ss_pred EcCCCeEEEEEEEeeeC----CCE--EEEEECCEECCCcccccCCcEEEEEcccc--cCEEEEEEEEeCCCcEE
Confidence 34567888999753221 112 2332221100 000001223346666664 57899999999998753
No 158
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.68 E-value=6.6e-16 Score=143.18 Aligned_cols=127 Identities=9% Similarity=0.027 Sum_probs=90.9
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCC--CCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCcee
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSD--PTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTK 248 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~--~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~ 248 (616)
...|.|.+++.+|.|.|+|.|.|..+...... ....+.+.....+|.+....+..+.+.+|+.+.|.|.+.+.|.|.+
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v 168 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANV 168 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEE
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCee
Confidence 45799999999999999999998776532211 0122333333334555455556677888999999999999999999
Q ss_pred EEEECCeeecccCcE----------------------EEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 249 EWLCNDITIISKDRF----------------------KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 249 ~W~~~~~~~~~~~~~----------------------~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
.|++++..+...... .... .....|.|.++...|.|.|+|.|.|..|..
T Consensus 169 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 239 (250)
T 2fbo_J 169 TWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASF-SGARNLVIRAAKITDAGRVWCELATGQGEL 239 (250)
T ss_dssp EEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEE-ETTTEEEECSCCGGGCEEEEEEEESSSSGG
T ss_pred EEEeCCCcccccccCcceeEeccCCCCccccCceEeccccc-CCccEEEEecCCcccCEEEEEEecCCcccc
Confidence 999998766432110 0000 022489999999999999999999966643
No 159
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.68 E-value=1.7e-16 Score=154.64 Aligned_cols=127 Identities=17% Similarity=0.202 Sum_probs=92.9
Q ss_pred eEEeecccCCCeE-EEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEE
Q psy12426 173 KGKVLDLIEGNQY-EFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWL 251 (616)
Q Consensus 173 ~l~i~~l~~~~~~-~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~ 251 (616)
.|.|.++...|.| .|+|.|.|..|..... ..+.+ ..+|.+ ....+..|+.+.|.|.+.|.|.|.+.|+
T Consensus 213 ~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~-~~l~V-----~~~P~i-----~~~~~~~g~~v~l~C~~~g~P~p~i~W~ 281 (347)
T 2ifg_A 213 GLTLANVTSDLNRKNVTCWAENDVGRAEVS-VQVNV-----SFPASV-----QLHTAVEMHHWCIPFSVDGQPAPSLRWL 281 (347)
T ss_dssp EEEEESCCSTTTTCCEEECCEETTEECCEE-ECCCC-----BEEEEE-----EECCCEESSSEEEEEEEEEESCCEEEEE
T ss_pred eEEEeeCChHHCCCeEEEEEEcCCCCEEEE-EEEEE-----cCCCee-----eeccCccCceEEEEEEeeecCCCcEEEE
Confidence 5777888888888 8888888877664321 11111 123332 1122357899999999999999999999
Q ss_pred ECCeeecccCcEEEEecC-------CceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy12426 252 CNDITIISKDRFKIVNDD-------KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIP 310 (616)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~-------~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p 310 (616)
+++..+............ ....|.|.++...|.|.|+|.|.|..|....++.+.|..+|
T Consensus 282 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 282 FNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp ETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred eCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 999988755544433211 24579999999999999999999999998888888877654
No 160
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.68 E-value=2.3e-16 Score=143.36 Aligned_cols=154 Identities=18% Similarity=0.182 Sum_probs=97.3
Q ss_pred CCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEE
Q psy12426 339 GTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTV 418 (616)
Q Consensus 339 ~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~ 418 (616)
+..+.+|.+++.......+........+.+.+.+|.+++.|.|+|.|.|..|.+.++. ...+.+....|..|..+..
T Consensus 19 ~~~Vt~Y~~~~~~~~~~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~---~~~~~t~~~~~~~~~~~~~ 95 (232)
T 4go6_B 19 NVMVTHYFLPPDDAVPSDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSE---ISAFKTCLPGFPGAPCAIK 95 (232)
T ss_dssp EEEECEEECCCC------------------CEEECCTTCEEEEEEEEEETTEEEEECC---CEEEECCCTTSCCCCEEEE
T ss_pred CEEEEEEEEEeeCCCCCcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCcccccc---ceeeeecCCCCCCCCeeeE
Confidence 4457788887765433333333334566799999999999999999999999987743 3344333333333444555
Q ss_pred EEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-C-------------ceEeEeecCCccEE-------EcCCCCCCC
Q psy12426 419 TDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-P-------------WEKACIVPANITAT-------SVPDLKEGE 477 (616)
Q Consensus 419 ~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~-------------~~~~~~~~~~~~~~-------~l~~L~p~t 477 (616)
...+.+++.|+|.+|..+++ +|.+|.|+|+..+. . |............+ .+.+|.+++
T Consensus 96 ~~~~~~sv~l~W~~P~~~~G-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t 174 (232)
T 4go6_B 96 ISKSPDGAHLTWEPPSVTSG-KIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKP 174 (232)
T ss_dssp EEEETTEEEEEEECCSCCSS-CCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSE
T ss_pred EecCCCEEEEEEeCCCCCCC-ceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccCC
Confidence 56788999999999877666 79999999987654 1 12211112222222 345789999
Q ss_pred eEEEEEEEEcCCCCCCCCC
Q psy12426 478 EYEFRVIAVNKGGPGEPSK 496 (616)
Q Consensus 478 ~Y~~~v~a~n~~G~g~~s~ 496 (616)
.|.|||+|.|..|.|++|.
T Consensus 175 ~Y~frV~A~N~~G~Gp~S~ 193 (232)
T 4go6_B 175 AIIFRIAARNEKGYGPATQ 193 (232)
T ss_dssp EEEEEEEEECSSCBCCCEE
T ss_pred ceEEEEEEECCCcCCCCcc
Confidence 9999999999999998775
No 161
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.8e-16 Score=143.16 Aligned_cols=162 Identities=16% Similarity=0.133 Sum_probs=113.2
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeec--cceEEEeecCCCCCceeEeeeccCCccceeec
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLR--PIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKC 78 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~--G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~ 78 (616)
||.|. .|.++.+.+|+.+.|.|.+.|.|.|.|+|+|+|..|... ..|....
T Consensus 19 ~P~~~--~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~------------------------- 71 (215)
T 3mtr_A 19 APKLQ--GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYN------------------------- 71 (215)
T ss_dssp EEEEE--CCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEE-------------------------
T ss_pred CCccc--CCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEec-------------------------
Confidence 46663 477899999999999999999999999999999988743 2333221
Q ss_pred cccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCCCcce-eecCCCceee-----------ee------cCcccc
Q psy12426 79 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHI-ARAKKGKCYH-----------LV------GTLLKD 140 (616)
Q Consensus 79 ~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~-~~~~~p~~~~-----------~~------g~p~~~ 140 (616)
......|.|.++...|.|.|.|.|.|..|..... ..... .....|..+. +. |.|+..
T Consensus 72 ---~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~ 146 (215)
T 3mtr_A 72 ---TPSASYLEVTPDSENDFGNYNCTAVNRIGQESLE--FILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILK 146 (215)
T ss_dssp ---ETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEE--EEEEECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEE
T ss_pred ---CCCeeEEEEecCChhhCeEEEEEEEECCCceEEE--EEEEECCCCCCCcceEEEEecceEEEEEecCCccCCCceEE
Confidence 1124689999999999999999999999976433 11111 1112222211 11 457777
Q ss_pred cEEEEeeccCcccccccCCCceEecc---cCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCC
Q psy12426 141 SIYEQLKRSGLFDQFHLCPIWEKCAQ---TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSD 202 (616)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~ 202 (616)
|.+++ . . .....|..... .......|.|.+|.+++.|.|+|.|.|..|.+..+.
T Consensus 147 y~v~~--~----~--~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~ 203 (215)
T 3mtr_A 147 YKAEW--R----A--VGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISA 203 (215)
T ss_dssp EEEEE--E----E--TTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCC
T ss_pred EEEEE--E----E--CCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCccc
Confidence 88877 3 1 23345654321 111226899999999999999999999999988764
No 162
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.68 E-value=2e-15 Score=139.56 Aligned_cols=135 Identities=10% Similarity=0.045 Sum_probs=92.7
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccc------------cCCCceeccCCcceEEEcCCeEEEEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK------------KVSPYINRDQLSDIKVRAGSNFEFDI 238 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~------------~~~P~~~~~~~~~~~v~~g~~~~l~c 238 (616)
...|.|.+++++|.|.|+|.|.|..+....+. ...+.+... ..+|.+ ...+..+.+.+|+.+.|.|
T Consensus 80 ~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~G~~v~L~C 157 (247)
T 2ghw_B 80 TLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQ-GTLVTVSSGGGGSGGGGSGGGGSETTL-TQSPATLSLSPGERATLSC 157 (247)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEEEECC-CEEEEECSCC------------CCCCE-EEECSEEEECTTSCEEEEE
T ss_pred EEEEEECcCCHHHCEEEEEeeeccCCccccCC-ceEEEEecccccccccccCCCCcceEE-EccCCEEEecCCCcEEEEE
Confidence 34799999999999999999999733211111 112333322 123333 3345567789999999999
Q ss_pred EEeeecCceeEEEE--CCeeec------------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eeeEE
Q psy12426 239 NVIGEPIPTKEWLC--NDITII------------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAK 303 (616)
Q Consensus 239 ~~~~~p~~~~~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~ 303 (616)
.+.+.+.+.+.|++ ++..+. ...++.+...+....|.|.+++..|+|.|+|.|.|..+.. .....
T Consensus 158 ~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~ 237 (247)
T 2ghw_B 158 RASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTK 237 (247)
T ss_dssp EESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEE
T ss_pred EeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEE
Confidence 99999999999999 554321 1345666555566789999999999999999999854332 23445
Q ss_pred EEEe
Q psy12426 304 VTVL 307 (616)
Q Consensus 304 l~v~ 307 (616)
|.|.
T Consensus 238 l~V~ 241 (247)
T 2ghw_B 238 VEVK 241 (247)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5554
No 163
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.67 E-value=2.6e-16 Score=142.51 Aligned_cols=131 Identities=11% Similarity=0.092 Sum_probs=91.5
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 250 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W 250 (616)
...|.|.+++.+|.|.|.|.+.+..+...... .... ...++...........+..+..+.+.|.+.+.|.|.+.|
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W 152 (218)
T 4frw_A 78 DGSVLLRNAVQADEGEYECRVSTFPAGSFQAR----LRLR-VLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTW 152 (218)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEEETTEEEEEE----EEEE-EEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEE
T ss_pred eEEEEEeeccHHHCCceeEEEEeccCceeeeE----EEEE-EeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEE
Confidence 44799999999999999999988766433211 1111 112222223334456677889999999999999999999
Q ss_pred EECCeeecccCcEEEEec-CCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEE
Q psy12426 251 LCNDITIISKDRFKIVND-DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 306 (616)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~-~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v 306 (616)
++++..+........... ...+.|.|.++...|.|.|+|.|.|..|.......+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 153 DTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred EECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 999877654332221110 11347999999999999999999999998766665554
No 164
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.67 E-value=1.3e-15 Score=155.50 Aligned_cols=240 Identities=9% Similarity=-0.001 Sum_probs=141.8
Q ss_pred cCCCeEEEEEEEeee-cC-C-eeeeeeCCeeeee----------ccceEEEeecCCCCCceeEeeeccCCccceeecccc
Q psy12426 15 SAGTTLKFDANIIGE-PV-P-HVDWRAGGNPLNL----------RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQT 81 (616)
Q Consensus 15 ~~g~~v~l~C~~~g~-P~-p-~v~W~~~~~~l~~----------~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~ 81 (616)
.+|+.+.|.|.+.|. |. | .|+|+|++..... .|.|..
T Consensus 139 ~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~------------------------------ 188 (475)
T 1iga_A 139 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTT------------------------------ 188 (475)
T ss_pred CCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEE------------------------------
Confidence 689999999999997 66 5 9999998853211 122211
Q ss_pred CCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCCC----------------------CcceeecCCCc--------ee
Q psy12426 82 EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPT----------------------APHIARAKKGK--------CY 131 (616)
Q Consensus 82 ~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~~----------------------~~~~~~~~~p~--------~~ 131 (616)
...|.|..+...|.|.|.|.|.|..|........ ....+....|. .+
T Consensus 189 ---~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v 265 (475)
T 1iga_A 189 ---SSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEA 265 (475)
T ss_pred ---EEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCce
Confidence 1257777888888999999999987632111000 01111111121 11
Q ss_pred e----eecCcc---cccEEEEeeccCcccccccCCCceEecccCC---CCCeEEeecccCCCeEEEEEEEEeCCCCCCCC
Q psy12426 132 H----LVGTLL---KDSIYEQLKRSGLFDQFHLCPIWEKCAQTEG---DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 201 (616)
Q Consensus 132 ~----~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s 201 (616)
. ..|.+. ..+.| . . +... ............+ ....|.|.++...|.|.|+|.|.|..|.....
T Consensus 266 ~L~C~~~g~~p~~~~~i~W-~--~-~~~~---~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~ 338 (475)
T 1iga_A 266 NLTCTLTGLRDASGVTFTW-T--P-SSGK---SAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLT 338 (475)
T ss_pred EEEEEEEcccCCCceEEEE-C--C-CCcC---CccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceE
Confidence 1 115433 46777 4 3 2111 0000000000001 22368999999999999999999988764211
Q ss_pred CCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeee-c-CceeEEEECCeeecccCcEE----EE---ecC---
Q psy12426 202 DPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-P-IPTKEWLCNDITIISKDRFK----IV---NDD--- 269 (616)
Q Consensus 202 ~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p-~~~~~W~~~~~~~~~~~~~~----~~---~~~--- 269 (616)
..+.......+|.+....+....+..|+.+.|.|.+.+. | .+.+.|+++|..+....... .. .++
T Consensus 339 ---~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~ 415 (475)
T 1iga_A 339 ---ATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFA 415 (475)
T ss_pred ---EEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEE
Confidence 112222234667665444443346789999999999986 3 35999999998876543111 11 111
Q ss_pred CceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 270 KSTKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 270 ~~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
..+.|.|......+.|.|+|.|.|....
T Consensus 416 ~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 416 VTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred EEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 1235677777777899999999996543
No 165
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.67 E-value=1.6e-16 Score=141.95 Aligned_cols=127 Identities=10% Similarity=0.046 Sum_probs=80.4
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.|.|..|.... ...+.+......|.+. ...+..|+.+.|.|.+.|.|.+.+.|++
T Consensus 68 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~---~~~l~V~~~~~~p~~~-----~~~~~~g~~v~l~C~~~g~P~p~v~W~~ 139 (202)
T 3bp6_B 68 LFHIPSVQVRDSGQYRCLVICGAAWDYK---YLTVKVKASYMRIDTR-----ILEVPGTGEVQLTCQARGYPLAEVSWQN 139 (202)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEE---EEEEEEEBCCCCEEEE-----EEECTTTCCEEEEEEEEEBSCCEEEETT
T ss_pred EEEECCCCHHHCcEEEEEEEeCCCcceE---EEEEEecCCCCcccEE-----EEecCCCCeEEEEEEccccCCceEEEEe
Confidence 5666666666666666666665543211 1112222222223221 1234579999999999999999999999
Q ss_pred CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecC
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDI 309 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~ 309 (616)
++..+.. .......+....+.+.++...|.|.|+|.|.|..|.....+.+.+...
T Consensus 140 ~~~~~~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 140 VSVPANT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp CCSCCEE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred CCCCccC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 8765421 112222233356677888899999999999999999888887776543
No 166
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.67 E-value=1.1e-15 Score=152.80 Aligned_cols=262 Identities=16% Similarity=0.160 Sum_probs=163.9
Q ss_pred cCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCC-----CceEEEEEEEEe
Q psy12426 277 FDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGG-----TDILHYVVEKMD 351 (616)
Q Consensus 277 ~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~-----~~i~~y~v~~~~ 351 (616)
..+...+.+.|.+.|.|..|.. ..+.+.-...|.+|.+ +.+.... +.+.|+|.+|..... .....|.|+|+.
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~v~p~pP~~-l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~ 153 (419)
T 2gys_A 77 QSFVVTDVDYFSFQPDRPLGTR-LTVTLTQHVQPPEPRD-LQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKR 153 (419)
T ss_dssp SCCCTTCEEEEEEEESSCCCEE-EEEEGGGSBCCCCCEE-EEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEE
T ss_pred cceeeecccEEEEeCCcccccc-ceEcHHHcccCCCCCc-eEEEecC-CeEEEEECCCccccccchhccCceEEEEEEcc
Confidence 3444456777778776655531 1222222346778876 6666655 699999998765321 246889999988
Q ss_pred CCCCCEEEccc--cccceEEec--cccCCCeEEEEEEEEecC---cCCCCccccCCEEccCCCCCCCCCCCCEEEEecCC
Q psy12426 352 METGRWVPMGD--VSGTYTRAE--NLIEGHDYNFRVKAVNKI---GESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKD 424 (616)
Q Consensus 352 ~~~~~~~~~~~--~~~~~~~i~--~L~~~~~y~~~v~a~n~~---g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~ 424 (616)
.+ ..|..... .....+.+. +|.+++.|.++|+|.+.. +.|.+++++..+.+.+....|.+|.++.+...+.+
T Consensus 154 ~~-~~w~~~~~~~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~~~~ 232 (419)
T 2gys_A 154 LQ-DSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAA 232 (419)
T ss_dssp TT-SCSTTCEEEEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEEECSSS
T ss_pred CC-CChhheeeecccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEEECCce
Confidence 75 55543322 123444555 899999999999999965 45788888999998888777888999998888889
Q ss_pred eEEEEecCCCCCCCCcceeEEEEEeeCCC------C-ceEeE---eecC------CccEEEcCCCCCCCeEEEEEEEEcC
Q psy12426 425 HVDLEWTPPKKDGGSPISQYIIEKKPKYG------P-WEKAC---IVPA------NITATSVPDLKEGEEYEFRVIAVNK 488 (616)
Q Consensus 425 ~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~------~-~~~~~---~~~~------~~~~~~l~~L~p~t~Y~~~v~a~n~ 488 (616)
.+.+.|+++... .. ...|.|+|+.... . +.... ...+ ....+.+.+|.+.+.|.|+|.|.++
T Consensus 233 ~l~c~W~~~~~~-~~-~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~ 310 (419)
T 2gys_A 233 VLSCSWEVRKEV-AS-SVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRA 310 (419)
T ss_dssp EEEEEEEEEHHH-HT-TCCEEEEEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCC
T ss_pred EEEeEEECCCCC-CC-ceeEEEEEEecCccccccCcccccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEEEccC
Confidence 999999964211 11 2459999986531 1 22221 1101 1236778899999999999999754
Q ss_pred CCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEEee
Q psy12426 489 GGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEATDV 568 (616)
Q Consensus 489 ~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ 568 (616)
.|. ... ... ..++|| .+.+..
T Consensus 311 ~~~--~~~-~~~------------------------------------------------------v~p~PP-~l~v~~- 331 (419)
T 2gys_A 311 EKH--IKS-SVN------------------------------------------------------IQMAPP-SLQVTK- 331 (419)
T ss_dssp CEE--EEG-GGS------------------------------------------------------BCCCCC-EEEEC--
T ss_pred Ccc--ccc-eEE------------------------------------------------------EEECCC-CeEEEE-
Confidence 331 100 000 124555 244333
Q ss_pred cCCcEEEEeeCCCCCCCCceeeeEEEEeecCCCCeE
Q psy12426 569 DKDHIKIKWQQPISNGGSAIKGYEVERRERTSGRWI 604 (616)
Q Consensus 569 ~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~w~ 604 (616)
+.+++.|+|++|.......+.+|+|.|+..+ ..|.
T Consensus 332 ~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~-~~w~ 366 (419)
T 2gys_A 332 DGDSYSLRWETMKMRYEHIDHTFEIQYRKDT-ATWK 366 (419)
T ss_dssp --CCCEEEEEC--------CEEEEEEEECSS-SCST
T ss_pred eCCeEEEEECCCcccccccceEEEEEEEcCC-CCcc
Confidence 4789999999985321236789999999775 4464
No 167
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.67 E-value=3.1e-16 Score=137.55 Aligned_cols=65 Identities=11% Similarity=0.002 Sum_probs=49.9
Q ss_pred EEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 227 KVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 227 ~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
.+..|+.+.|.|.+.+.+ +.+.|++++..+....... .....|.|.++...|.|.|+|.|.|..+
T Consensus 104 ~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 104 AVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPER----WYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp SSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCCE----EEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred eecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecCC----CceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 456899999999987654 6999999998765422211 1223788999999999999999999754
No 168
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.67 E-value=1.2e-16 Score=143.74 Aligned_cols=122 Identities=15% Similarity=0.193 Sum_probs=86.4
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE-eeecCceeEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKEW 250 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~-~~~p~~~~~W 250 (616)
..|.|.+++..|.|.|+|.|.|..|....+ ....+.+. .+|.+.. ......+..|+.+.|.|.+ .+.|.+.+.|
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~-~~~~l~V~---~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W 142 (209)
T 1nbq_A 68 TGITFKSVTREDTGTYTCMVSEEGGNSYGE-VKVKLIVL---VPPSKPT-VNIPSSATIGNRAVLTCSEQDGSPPSEYTW 142 (209)
T ss_dssp TEEECSCCCTTSCSEEEEEEEETTSSCEEC-CEEECCEE---BCCCCCC-CCCBSEEETTSCEEECCCCCSCBSCCEEEE
T ss_pred cEEEEeeCCHHHCcEEEEEEecCCCCccce-EEEEEEEe---cCCcCCC-cccccceecCCEEEEEEeCCCCCCCceeEE
Confidence 478899999999999999999886632211 11111221 2333321 1234568899999999997 8999999999
Q ss_pred EECCeeecccCcE-------EEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 251 LCNDITIISKDRF-------KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 251 ~~~~~~~~~~~~~-------~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
++++..+...... ..........|.|.++...|.|.|+|.|.|..|..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 143 FKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp EETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred EECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 9999877644321 11112234589999999999999999999999887
No 169
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.66 E-value=1.6e-15 Score=133.52 Aligned_cols=115 Identities=10% Similarity=-0.018 Sum_probs=78.8
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.|.|..|....+. ...+.+.....+|.+... + ...+.+|+.++|.|.+.+ +.+.+.|+|
T Consensus 58 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~-~~~l~V~~~~~~p~i~~~-p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k 133 (188)
T 1oll_A 58 KFYIPDMNSRMAGQYSCIYRVGELWSEPSN-LLDLVVTEMYDTPTLSVH-P-GPEVISGEKVTFYCRLDT-ATSMFLLLK 133 (188)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEECCCCC-CEEEEEESCSCCCEEEEE-S-CSEEETTCEEEEEEECSS-SCSEEEEEE
T ss_pred EEEeCcCCcccCeEEEEEecCCCCCCCCCC-ceEEEecccCCCCeEEEC-C-CCccccCCEEEEEEEcCC-CCCEEEEEE
Confidence 567777888888888888877654333221 122333322335655422 2 356889999999999866 456899999
Q ss_pred CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCC
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSW 295 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 295 (616)
++..+.. ..........|.|.+++..|.|.|+|.|.|..
T Consensus 134 ~g~~~~~----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 134 EGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp ESSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred CCccccc----cccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 9876543 12233455689999999999999999999854
No 170
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.66 E-value=9.1e-15 Score=128.30 Aligned_cols=84 Identities=17% Similarity=0.287 Sum_probs=70.2
Q ss_pred cceEEEcCCeEEEEEEEeeec-CceeEEEE---CCeeec-c--cCcEEEEecCCceEEEecCCC-CCCcEEEEEEEEcCC
Q psy12426 224 SDIKVRAGSNFEFDINVIGEP-IPTKEWLC---NDITII-S--KDRFKIVNDDKSTKLKVFDSK-RGDSGIYTLAVKNSW 295 (616)
Q Consensus 224 ~~~~v~~g~~~~l~c~~~~~p-~~~~~W~~---~~~~~~-~--~~~~~~~~~~~~~~l~i~~l~-~~~~g~y~c~a~n~~ 295 (616)
....+..|+.+.|.|.+.+.| .+.+.|++ ++..+. . ..++.+...+....|.|.++. ..|.|.|+|.|.|..
T Consensus 91 ~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~ 170 (184)
T 3b5h_A 91 SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSK 170 (184)
T ss_dssp SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETT
T ss_pred CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCC
Confidence 456788999999999999999 79999999 444433 2 266777777777899999999 999999999999999
Q ss_pred CCceeeEEEEEe
Q psy12426 296 GTDKGTAKVTVL 307 (616)
Q Consensus 296 g~~~~~~~l~v~ 307 (616)
|.....+.|.|.
T Consensus 171 g~~~~~~~l~V~ 182 (184)
T 3b5h_A 171 GSDQAIITLRVR 182 (184)
T ss_dssp EEEEEEEEEEEC
T ss_pred CcceEEEEEEEe
Confidence 998888877775
No 171
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.66 E-value=2.6e-14 Score=146.74 Aligned_cols=276 Identities=10% Similarity=0.031 Sum_probs=148.4
Q ss_pred CCCCCCceEecCCCeEEEEEEEeeecC----CeeeeeeC--CeeeeeccceEEE--eecCCCCCceeEeeeccCCcccee
Q psy12426 5 DRRHLGDIKLSAGTTLKFDANIIGEPV----PHVDWRAG--GNPLNLRPIWEKC--AQTEGDTPKGKVLDLIEGNHPIWE 76 (616)
Q Consensus 5 ~~~~~~~~~v~~g~~v~l~C~~~g~P~----p~v~W~~~--~~~l~~~G~Y~C~--a~n~~~~~~~~v~~~~~~~~p~w~ 76 (616)
.+..|..+.+.+|++|+|.|.+.+.+. +.|.|||+ |+.+..- .|.-. ..+......+++...
T Consensus 3 ~l~qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l-~~~~~~~~~~~~~~~~~R~~~~--------- 72 (512)
T 1zvo_C 3 QLQESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWI-GGVYYTGSIYYNPSLRGRVTIS--------- 72 (512)
T ss_pred EEECCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEE-EEEecCCCEEECCccCCceEEE---------
Confidence 344588999999999999999987654 67999996 3322110 00000 000000001111110
Q ss_pred eccccCCCCCceEecCcccCCeEEEEEEEEcCCC-----------C---CCCC--C----CCCcceeecCCC--------
Q psy12426 77 KCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGG-----------P---GEPS--D----PTAPHIARAKKG-------- 128 (616)
Q Consensus 77 ~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g-----------~---~~~~--~----~~~~~~~~~~~p-------- 128 (616)
........+|.|.++++.|+|.|.|.+.+..+ . +... . ......+....|
T Consensus 73 --~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~ 150 (512)
T 1zvo_C 73 --VDTSRNQFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDN 150 (512)
T ss_pred --ecCCCCEEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCC
Confidence 00012246899999999999999999998642 0 0000 0 000011111111
Q ss_pred ceeee----ecC-ccc-ccEEEEeeccCcccccccCCCceEecccCC---CCCeEEeecccCCCeEEEEEEEEeCCCCCC
Q psy12426 129 KCYHL----VGT-LLK-DSIYEQLKRSGLFDQFHLCPIWEKCAQTEG---DTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 199 (616)
Q Consensus 129 ~~~~~----~g~-p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 199 (616)
..+.+ .|. |.+ .+.|++ .... . ............+ ....|.|.....+ .|.|+|.|.|..|...
T Consensus 151 ~~v~L~C~~~g~~P~p~~v~W~~--~~~~-~---~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~ 223 (512)
T 1zvo_C 151 SPVVLACLITGYHPTSVTVTWYM--GTQS-Q---PQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSK 223 (512)
T ss_pred CeEEEEEEEEeeecCceEEEEEc--Cccc-C---ceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCce
Confidence 11221 154 544 788887 4211 0 0000000000011 0124778777766 8999999999887643
Q ss_pred CCC--------CCCCEEecc-------------------------------------------------ccCCCceeccC
Q psy12426 200 PSD--------PTAPHIARA-------------------------------------------------KKVSPYINRDQ 222 (616)
Q Consensus 200 ~s~--------~~~~~~~~~-------------------------------------------------~~~~P~~~~~~ 222 (616)
... ....+.+.. ...+|.+....
T Consensus 224 ~~~~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~ 303 (512)
T 1zvo_C 224 KEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLT 303 (512)
T ss_pred EEEecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEEC
Confidence 211 000111110 11234443333
Q ss_pred CcceEEEcCCeEEEEEEEeeecC--ceeEEEECCeeecccCc---EEEEecCC---ceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEPI--PTKEWLCNDITIISKDR---FKIVNDDK---STKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p~--~~~~W~~~~~~~~~~~~---~~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
+....+..|+.+.|.|.+.+..+ ..+.|++++..+..... .....++. .+.|.|......|.|.|+|.|.|.
T Consensus 304 p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~ 383 (512)
T 1zvo_C 304 PAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHP 383 (512)
T ss_pred CChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeC
Confidence 33344668999999999998633 48999999987542111 11111111 246889888888999999999998
Q ss_pred CCCce
Q psy12426 295 WGTDK 299 (616)
Q Consensus 295 ~g~~~ 299 (616)
.+...
T Consensus 384 ~~~~~ 388 (512)
T 1zvo_C 384 SLPPQ 388 (512)
T ss_pred CCCCC
Confidence 76543
No 172
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.66 E-value=3.1e-15 Score=141.27 Aligned_cols=245 Identities=14% Similarity=0.116 Sum_probs=147.2
Q ss_pred EcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEe-
Q psy12426 229 RAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL- 307 (616)
Q Consensus 229 ~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~- 307 (616)
..|++++|.|.+...+ .+.|.+++..... . ...+|.|.++...|.|.|+|.+ .|.....+.+.+.
T Consensus 19 ~~G~~v~l~C~~~~~~--~i~W~~~~~~~~~------~---~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~v~~ 84 (306)
T 3d85_D 19 APGEMVVLTCDTPEED--GITWTLDQSSEVL------G---SGKTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLLLHK 84 (306)
T ss_dssp CCCEEEEEECSSSCCS--SCEEEETTCCCCC------E---ESSEEEEEECSGGGCEEEEEEE---TTEEEEEEEEEEEE
T ss_pred ccCCcEEEECCCCCCC--cCEEEECCccccC------C---CCCEEEEEecCcCCCceEEEee---CCcccceEEEEEEe
Confidence 3799999999988433 7999999875321 1 1238999999999999999999 3555445555443
Q ss_pred ------------cCCCCCCCC-ccceeecC-CeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc--cccceE---
Q psy12426 308 ------------DIPSPPEGP-LKPSNITK-SSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD--VSGTYT--- 368 (616)
Q Consensus 308 ------------~~p~~p~~~-~~~~~~~~-~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~~~~~--- 368 (616)
.++.+|..+ +....... ..+++.|.+... +. ....|...+. .....|..+.. .....+
T Consensus 85 ~~~~~~~t~i~~~~~~pp~~~~lsC~~~~~~~~~~C~W~pg~~-~~-l~~~~~~~r~-~~~~~~~~C~~~~~~~~~c~v~ 161 (306)
T 3d85_D 85 KEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTIS-TD-LTFSVKSSRG-SSDPQGVTCGAATLSAERVRGD 161 (306)
T ss_dssp EETTEECCCSSCCCC---CCCCCEEEBSSSSSEEEEEEEESCC-SS-EEEEEEEEEC-SSSCEEEEECCCEEEEEEEC--
T ss_pred ccCCcceeeeecccCCCCCCCcceEEcCCcccCcEEEecCCCC-Cc-eeEEEEEEec-CCCCcceECCCCCCCccceeec
Confidence 223344432 33332222 389999996433 22 2334444322 11223443322 001111
Q ss_pred ----------EeccccCC----CeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEec-CCeEEEEecCC
Q psy12426 369 ----------RAENLIEG----HDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWG-KDHVDLEWTPP 433 (616)
Q Consensus 369 ----------~i~~L~~~----~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~-~~~v~l~W~~p 433 (616)
.+..+.+. ..|.|+|.|.|..|..... ..+. ......|++|.++.+.... ...+.|+|++|
T Consensus 162 ~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~---~~f~-~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P 237 (306)
T 3d85_D 162 NKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYT---SSFF-IRDIIKPDPPKNLQLKPLKNSRQVEVSWEYP 237 (306)
T ss_dssp CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEE---EEEC-HHHHBCCCCCEEEEEEEC----CEEEEEECC
T ss_pred CccccceeeeeeccccccccccEEEEEEEEEEccCCccccc---eEEE-ehhcEecCCCceEEEEEecCCCcEEEEEcCC
Confidence 12233333 4899999999998864321 1111 1123578899999988753 47899999987
Q ss_pred CCCC---CCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCC
Q psy12426 434 KKDG---GSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASA 499 (616)
Q Consensus 434 ~~~~---~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~ 499 (616)
..-+ +--...|+|+|+..+. .|..... ...+++.|. +++.|.|+|+|.+..|.|.+|..+.
T Consensus 238 ~~~~~p~~~~~L~Y~vryr~~~~~~~~~~~~--~~~ts~~l~---~~~~Y~vqVRa~~~~~~G~WSeWS~ 302 (306)
T 3d85_D 238 DTWSTPHSYFSLTFCVQVQGKSKREKKDRVF--TDKTSATVI---CRKNASISVRAQDRYYSSSWSEWAS 302 (306)
T ss_dssp TTSCSCTTTSCEEEEEEEECC------CEEE--ESSSEEEEC---CCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred CCCcCCCceeeEEEEEEEEECCCCccEEEee--ccccEEEEe---CCCeEEEEEEeccCCCCCCCCCCCC
Confidence 5321 1123689999998775 5544332 344567764 5999999999999999999988654
No 173
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.66 E-value=1e-15 Score=136.46 Aligned_cols=139 Identities=21% Similarity=0.363 Sum_probs=108.2
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
..| +|.++.+..++.+++.|+|.+|. +..+.+|.|+|+..+. .+............++|.+|.|++.|.|+|+|.
T Consensus 22 ~~P-~P~~l~~~~~~~~sv~lsW~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 97 (203)
T 2gee_A 22 EVP-QPTDLSFVDITDSSIGLRWTPLN---SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTV 97 (203)
T ss_dssp CCC-CCEEEEEECCTTTCEEEEEECCS---SSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred cCc-CCCccEEEecCCCEEEEEecCCC---CCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEE
Confidence 556 78899999999999999999865 2368999999998776 344444556778899999999999999999999
Q ss_pred cCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEE
Q psy12426 487 NKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEAT 566 (616)
Q Consensus 487 n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~ 566 (616)
|..|.|.++. ..+. ..+| +|.++++.
T Consensus 98 ~~~g~s~~~~---~~t~--------------------------------------------------~~~p-~P~~l~~~ 123 (203)
T 2gee_A 98 KNGGESTPTT---LTQQ--------------------------------------------------TAVP-PPTDLRFT 123 (203)
T ss_dssp SSSCBCCCEE---EEEE--------------------------------------------------CCCC-CCEEEEEE
T ss_pred eCCCccccEe---eeec--------------------------------------------------CCCc-CCCceEEE
Confidence 9988775432 1111 1223 77788888
Q ss_pred eecCCcEEEEeeCCCCCCCCceeeeEEEEeecCC-CCeEEcc
Q psy12426 567 DVDKDHIKIKWQQPISNGGSAIKGYEVERRERTS-GRWIKIT 607 (616)
Q Consensus 567 ~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~w~~~~ 607 (616)
..+.+++.|+|++|. ++.|.+|+|.|+..++ ..|..+.
T Consensus 124 ~~~~~sv~l~W~~p~---~~~i~~Y~v~~~~~~~~~~~~~~~ 162 (203)
T 2gee_A 124 NIGPDTMRVTWAPPP---SIDLTNFLVRYSPVKNEEDVAELS 162 (203)
T ss_dssp EEETTEEEEEEECCS---SCCCSEEEEEEEETTCGGGCEEEE
T ss_pred EcCCCEEEEEEcCCC---CCCccEEEEEEEECCCCCccEEEE
Confidence 999999999999984 4789999999998654 3455443
No 174
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.66 E-value=2e-15 Score=135.49 Aligned_cols=131 Identities=12% Similarity=0.169 Sum_probs=95.7
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.+.+..+.... ....+.+......|.+..... . +..|+.+.|.|.+.+.| +.+.|++
T Consensus 72 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~--~~~~l~V~~~~~~p~i~~~~~-~--~~~g~~v~l~C~~~~~p-p~i~W~~ 145 (208)
T 3r4d_A 72 SLLFQMITMKDMGVYTLDMTDENYRRTQ--ATVRFHVHQPVTQPFLQVTNT-T--VKELDSVTLTCLSNDIG-ANIQWLF 145 (208)
T ss_dssp CEEECSCCGGGCEEEEEEEECSSCEEEE--EEEEEEEECCCCCCEEEESCS-S--CCTTCCEEEEEECSCTT-CEEEEEE
T ss_pred eEEEccccccCCeEEEEEEEcccCceeE--EEEEEEeccCCCCCEEecCCc-e--EeeCCCEEEEEECCCCC-CceEEEE
Confidence 6999999999999999999997542211 112233333334455533222 2 78999999999999976 7999999
Q ss_pred CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eeeEEEEEecCCC
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAKVTVLDIPS 311 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~l~v~~~p~ 311 (616)
++..+..+.++.+...+ ..|.|.++...|.|.|+|.|.|..|.. +..+.+.+..+|.
T Consensus 146 ~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 146 NSQSLQLTERMTLSQNN--SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp TTEECCCCSSEEEETTT--TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC----
T ss_pred CCEeCCCCCCeEEcCCC--CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 99998877777665443 489999999999999999999999875 4456666655543
No 175
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.65 E-value=1.3e-14 Score=137.93 Aligned_cols=252 Identities=17% Similarity=0.189 Sum_probs=160.2
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCcccccccCCCceEecccCCCCC
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTP 172 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (616)
+.+|+...+.|.+. |.|. .+.|++ .+|..- ........ ...+...
T Consensus 16 v~~G~~v~l~C~~~----------------------------~~p~-~v~W~~--~~g~~~--~~~~~~~~--~~~~~~~ 60 (291)
T 2wim_A 16 LSVGESKFFTCTAI----------------------------GEPE-SIDWYN--PQGEKI--ISTQRVVV--QKEGVRS 60 (291)
T ss_dssp EETTCCEEEEEEEE----------------------------SCCS-EEECBC--TTCCBC--CCBTTEEE--EEETTEE
T ss_pred ecCCCcEEEEEEEe----------------------------CCCC-ceEEEC--CCCcCc--cCCCcEEE--ecCCCEE
Confidence 56788999999987 4443 578877 433211 11121211 1123345
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.++..+|.|.|+|.|.|..|..... .+.+.. ..+|.+ ...+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 61 ~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~----~~~l~v-~~~~~~-~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~ 134 (291)
T 2wim_A 61 RLTIYNANIEDAGIYRCQATDAKGQTQEA----TVVLEI-YQKLTF-REVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLY 134 (291)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSSCEEEE----EEEEEE-ECCCBC-CSCCCSEEEETTSCEEECCCCBCSSCCEEEEEC
T ss_pred EEEEccCCcccCEEEEEEEecccCceEEE----EEEEEe-cCCcce-EeCCCChhhcCCCCEEEEEEEccCCCCEEEEEE
Confidence 89999999999999999999987753211 122111 234444 333456788999999999999999999999999
Q ss_pred CCeeecc--cCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc--eeeEEEEEecCCCCCCCCc--cceeecCCe
Q psy12426 253 NDITIIS--KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD--KGTAKVTVLDIPSPPEGPL--KPSNITKSS 326 (616)
Q Consensus 253 ~~~~~~~--~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~--~~~~~l~v~~~p~~p~~~~--~~~~~~~~~ 326 (616)
++..+.. ..++.+... ..|.|.++...|.|.|+|.+.|..+.. .....+.+..+|.....+. ......+..
T Consensus 135 ~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~ 211 (291)
T 2wim_A 135 HNEEVTTISDNRFAMLAN---NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEE 211 (291)
T ss_dssp C----CBCCCSSEEECTT---SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCE
T ss_pred CCccccccCCceEEEccC---CCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCe
Confidence 9887653 344444333 379999999999999999999987553 3445566666665432211 223345778
Q ss_pred EEEEEeCCCCCCCCceEEEEEEEE--eCC-CCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCCC
Q psy12426 327 CNLEWRAPRDDGGTDILHYVVEKM--DME-TGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLP 394 (616)
Q Consensus 327 ~~l~W~~~~~~~~~~i~~y~v~~~--~~~-~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~ 394 (616)
+.|.|..... +...+.+.+. ... ..... . ......+.|.++...+.+.|+|.|.|..|....
T Consensus 212 ~~l~C~~~g~----p~p~v~W~~~g~~~~~~~~~~-~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 276 (291)
T 2wim_A 212 MTFSCRASGS----PEPAISWFRNGKLIEENEKYI-L-KGSNTELTVRNIINSDGGPYVCRATNKAGEDEK 276 (291)
T ss_dssp EEEECBCCCB----SCCEEEEEETTEECCCTTTEE-E-CSTTCEEEEESCCSTTCEEEEEEEEETTEEEEE
T ss_pred EEEEEEeecC----CCCeEEEEECCEECcCCccEE-E-cCCccEEEEeeCCcccCEEEEEEEEECCCceee
Confidence 9999986432 2222222221 011 11111 1 123457899999999999999999999997543
No 176
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=1.1e-15 Score=141.96 Aligned_cols=138 Identities=12% Similarity=-0.028 Sum_probs=91.8
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCC-------CCCCCCCEEecccc------------CCCceeccCCcceEEEcC
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGE-------PSDPTAPHIARAKK------------VSPYINRDQLSDIKVRAG 231 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~-------~s~~~~~~~~~~~~------------~~P~~~~~~~~~~~v~~g 231 (616)
...|.|.+++++|.|.|.|.|.|..|... .+ ....+.+.... .++.+ ...+..+.+.+|
T Consensus 77 ~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~G 154 (257)
T 1f3r_B 77 QVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWG-PGTMVTVSSGGGGSGGGGSGGGGSDIKL-TQSPSLLSASVG 154 (257)
T ss_dssp EEEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEEC-CCEEEEECSSCCSSCCSSSCCCCCEECS-CEETSEECCCTT
T ss_pred EEEEEECCCCcccCEEEEEEEcccccCccccccccccC-CceEEEEEeCCccccccccCCCccceEE-EccCCEEEEcCC
Confidence 34799999999999999999999865210 01 11123332211 01122 233456678899
Q ss_pred CeEEEEEEEeeecCceeEEEE--CCeeec------------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 232 SNFEFDINVIGEPIPTKEWLC--NDITII------------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 232 ~~~~l~c~~~~~p~~~~~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
+.+.|.|.+.+.+.+.+.|++ ++..+. ...++.+...+....|.|.+++..|+|.|.|.|.|....
T Consensus 155 ~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 234 (257)
T 1f3r_B 155 DRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYT 234 (257)
T ss_dssp CCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEE
T ss_pred CCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCe
Confidence 999999999999989999999 554321 124565554455678999999999999999999996411
Q ss_pred ceeeEEEEEecCC
Q psy12426 298 DKGTAKVTVLDIP 310 (616)
Q Consensus 298 ~~~~~~l~v~~~p 310 (616)
......|.|...+
T Consensus 235 ~g~gt~l~V~~~~ 247 (257)
T 1f3r_B 235 FGAGTKLELKAAE 247 (257)
T ss_dssp ECCCCEECCSSSC
T ss_pred ECCCEEEEEeCCC
Confidence 1223345554433
No 177
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.65 E-value=1.4e-15 Score=133.53 Aligned_cols=118 Identities=13% Similarity=0.056 Sum_probs=91.7
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 250 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W 250 (616)
...|.|.+++.+|.|.|+|.+.|..|.. .+.+.... .+....+..|+.+.|.|.+.+.|.+.+.|
T Consensus 67 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~-------~l~V~~~~--------~~~~~~v~~g~~~~l~C~~~~~p~~~v~W 131 (184)
T 2ny1_B 67 NFPLIIKNLKIEDSDTYICEVEDQKEEV-------QLLVFGLT--------ANSDTHLLQGQSLTLTLESPPGSSPSVQC 131 (184)
T ss_dssp BCCEEECSCCGGGCEEEEEEETTEEEEE-------EEEEEEEE--------ESSCSEEETTCCEEEEEECCTTCCCEEEE
T ss_pred eEEEEEecCCHHHCEEEEEEEEcCCCcE-------EEEEEEec--------CCCCceeecCCCEEEEEEcCCCCCCEEEE
Confidence 4479999999999999999998875521 13322111 12345778999999999999999999999
Q ss_pred EECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCC
Q psy12426 251 LCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPP 313 (616)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p 313 (616)
++++..+. .. ...|.|.++...|.|.|+|.|.|..+.....+.+.|...|.++
T Consensus 132 ~~~~~~~~-------~~---~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~ 184 (184)
T 2ny1_B 132 RSPRGKNI-------QG---GKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS 184 (184)
T ss_dssp ECTTSCEE-------EE---SSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC--
T ss_pred EeCCCccc-------cC---ceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCCC
Confidence 99875441 11 2389999999999999999999988888889999998877643
No 178
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.65 E-value=2.4e-15 Score=139.53 Aligned_cols=141 Identities=11% Similarity=0.007 Sum_probs=93.4
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc------------ccCCCceeccCCcceEEEcCCeEEEEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA------------KKVSPYINRDQLSDIKVRAGSNFEFDI 238 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~------------~~~~P~~~~~~~~~~~v~~g~~~~l~c 238 (616)
...|.|.+++++|.|.|.|.|.|..+..... ...+.+.. ...+|.+ ...+....+.+|+++.|.|
T Consensus 79 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~--~~~l~V~~~~~~~~~~~~~~~~~~~~v-~~~p~~~~v~~G~~v~L~C 155 (253)
T 3uzq_A 79 TAYLHLSSLTSGDTAVYYCSRGWEGFAYWGQ--GTLVTVSAGGGGSGGGGSGGGGSELVM-TQTPASLAVSLGQRATISC 155 (253)
T ss_dssp EEEEEECSCCGGGCEEEEEEECSSSCCEECC--CEEEEECSSSCCCCC---------CCE-EEECSEEEECTTSCEEEEE
T ss_pred eEEEEeCCCCcccCEEEEEEEeeCCccEECC--CcEEEEecCCccccccccCCCcccceE-ECcCCeEEEeCCCCEEEEE
Confidence 3469999999999999999999854432111 11233321 1123444 3445668899999999999
Q ss_pred EEeeecCc----eeEEEEC--Ceeec------------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-e
Q psy12426 239 NVIGEPIP----TKEWLCN--DITII------------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-K 299 (616)
Q Consensus 239 ~~~~~p~~----~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~ 299 (616)
.+.+.+.+ .+.|+++ +..+. ...++.....+....|.|.+++..|+|.|.|.|.|..+.. .
T Consensus 156 ~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg 235 (253)
T 3uzq_A 156 RASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFG 235 (253)
T ss_dssp EESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBC
T ss_pred EecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEEC
Confidence 99998876 9999984 22111 1245665555666789999999999999999999865433 3
Q ss_pred eeEEEEEecCCCCCC
Q psy12426 300 GTAKVTVLDIPSPPE 314 (616)
Q Consensus 300 ~~~~l~v~~~p~~p~ 314 (616)
....|.|...+.+|.
T Consensus 236 ~gt~l~v~~~~~~~~ 250 (253)
T 3uzq_A 236 GGTKLEIKRPLEHHH 250 (253)
T ss_dssp CCEEEEECCC-----
T ss_pred CCEEEEEcCCCCCcc
Confidence 455667766554443
No 179
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.65 E-value=6.4e-16 Score=148.94 Aligned_cols=250 Identities=10% Similarity=0.041 Sum_probs=161.1
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecC-cccccEEEEeeccCcccccccCCCceEecccCCCC
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGT-LLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDT 171 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (616)
+.+|+.-.+.|.+. +. |.+.+.|++ ++..+. ..... ......
T Consensus 18 v~~G~~v~l~C~~~----------------------------~~~p~~~v~W~~--~~~~~~---~~~~~----~~~~~~ 60 (317)
T 2y25_A 18 VTGECNVLLKCKVA----------------------------NIKKETHIVWYK--DEREIS---VDEKH----DFKDGI 60 (317)
T ss_dssp EETTTEEEEEEEEE----------------------------SCCTTCEEEEEE--TTEEEC---CSCC---------CC
T ss_pred ECCCCeEEEEEEEc----------------------------CCCCCCEEEEEE--CCeEcC---CCCcE----EEECCe
Confidence 56899999999987 44 557799998 532221 11111 122344
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEee---------
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIG--------- 242 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~--------- 242 (616)
..|.|.+++..|.|.|+|.|.|..|..... +.+.. ...|.+. ..+....+..|+.+.|.|.+.+
T Consensus 61 ~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~-----~~l~v-~~~~~~~-~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~ 133 (317)
T 2y25_A 61 CTLLITEFSKKDAGIYEVILKDDRGKDKSR-----LKLVD-EAFKELM-MEVCKKIALSATDLKIQSTAEGIQLYSFVTY 133 (317)
T ss_dssp EEEEETTCCSTTCSCEEEEEESSSCEEEEE-----ECCST-HHHHHHH-HHHHHHHHTCBCCCEEEECSSEEEEEEEBSS
T ss_pred EEEEEccCCcccCeEEEEEEECCCCcEEEE-----EEEEE-ecCcccc-ccCCceecccCCCeEEEeeccccEEEEEecc
Confidence 689999999999999999999988753321 11111 0111111 1112233445666667776666
Q ss_pred -ecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEec-------------
Q psy12426 243 -EPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLD------------- 308 (616)
Q Consensus 243 -~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~------------- 308 (616)
.|.+.+.|++++..+..+.++.+...+....|.|.++...|.|.|+|.|.|..|....+..+.+..
T Consensus 134 ~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~ 213 (317)
T 2y25_A 134 YVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQ 213 (317)
T ss_dssp CCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCC
Confidence 688999999999998877888887777777899999999999999999999888877777665431
Q ss_pred ----CCCCCC----CCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCC-----CCCEEEccc-cccceEEecccc
Q psy12426 309 ----IPSPPE----GPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDME-----TGRWVPMGD-VSGTYTRAENLI 374 (616)
Q Consensus 309 ----~p~~p~----~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~-----~~~~~~~~~-~~~~~~~i~~L~ 374 (616)
....|. .+-......+..+.|.|...... ... +.|...+ ......... .....+.|.++.
T Consensus 214 ~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p----~p~--i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~ 287 (317)
T 2y25_A 214 AAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDP----PPE--VSWLKNEKALASDDHCNLKFEAGRTAYFTINGVS 287 (317)
T ss_dssp HHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSS----CCE--EEEEESSSEECCCSSEEECCBTTTEEEEEEBSCC
T ss_pred cccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCC----CCE--EEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCC
Confidence 001110 01123445677888888754222 122 2232211 112222222 233579999999
Q ss_pred CCCeEEEEEEEEecCcCC
Q psy12426 375 EGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 375 ~~~~y~~~v~a~n~~g~~ 392 (616)
..+.+.|+|.|.|..|..
T Consensus 288 ~~d~G~Y~C~a~N~~g~~ 305 (317)
T 2y25_A 288 TADSGKYGLVVKNKYGSE 305 (317)
T ss_dssp STTCEEEEEEEEETTEEE
T ss_pred HHHCEEEEEEEEeCCCeE
Confidence 999999999999999875
No 180
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.64 E-value=7.9e-16 Score=154.63 Aligned_cols=169 Identities=19% Similarity=0.203 Sum_probs=120.2
Q ss_pred CCeEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--
Q psy12426 376 GHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-- 453 (616)
Q Consensus 376 ~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-- 453 (616)
...+.+.|.+.|.++........... ..+|++|.++. ..++.+++.|+|.+|...++.++.+|.|+|+..+.
T Consensus 305 ~~~Gs~~C~C~ng~~ra~~d~~~~~c-----t~pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~ 378 (536)
T 3fl7_A 305 SPEGATSCECEEGFFRAPQDPASMPC-----TRPPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPES 378 (536)
T ss_dssp CCTTCSSCEECTTCBCCTTCCTTSCC-----BCCCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-C
T ss_pred CCCCccEEEEeccccccCCCcccccc-----ccCCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCC
Confidence 33456678888888876543222222 14788998885 46889999999999877777679999999987421
Q ss_pred -CceEe--------EeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeee
Q psy12426 454 -PWEKA--------CIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQE 524 (616)
Q Consensus 454 -~~~~~--------~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 524 (616)
.|... .........++|.+|.|++.|.|+|+|.|..|.+.++..+..++.
T Consensus 379 ~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v--------------------- 437 (536)
T 3fl7_A 379 GECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASV--------------------- 437 (536)
T ss_dssp CCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEE---------------------
T ss_pred CcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEE---------------------
Confidence 22111 122235789999999999999999999999987543222222221
Q ss_pred ecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCC
Q psy12426 525 YNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRERTSG 601 (616)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~ 601 (616)
.+.+.+|..+.....+.++|.|+|++|. ..||.|.+|+|.|+..+..
T Consensus 438 -----------------------------~T~~~~Ps~~~~~~~s~tSV~LsW~pP~-~~ng~I~~Y~V~y~~~~~~ 484 (536)
T 3fl7_A 438 -----------------------------SINQTEPPKVRLEGRSTTSLSVSWSIPP-PQQSRVWKYEVTYRKKGDS 484 (536)
T ss_dssp -----------------------------ECCSCCCCEEEEEECCC-CCEEEEECCT-TTTTTCSEEEEEEEEC--C
T ss_pred -----------------------------eecccCCCCCceeeccCCeEEEEEECCc-CCCCcccEEEEEEEECCCC
Confidence 2456778877778889999999999885 4489999999999987654
No 181
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.64 E-value=1.7e-15 Score=143.93 Aligned_cols=252 Identities=13% Similarity=0.088 Sum_probs=160.0
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCc-ccccEEEEeeccCcccccccCCCceEecccCCCC
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTL-LKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDT 171 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (616)
+..|+...+.|.+. |.+ .+.+.|++ .+|..- ................
T Consensus 14 v~~G~~v~l~C~~~----------------------------~~~~~~~i~W~~--~~g~~~--~~~~~~~~~~~~~~~~ 61 (291)
T 1qz1_A 14 ISVGESKFFLCQVA----------------------------GDAKDKDISWFS--PNGEKL--SPNQQRISVVWNDDDS 61 (291)
T ss_dssp EETTCCEEEEEEES----------------------------SCCSCCEEEEEC--TTSCBC--CSSCSSEEEEEEETTE
T ss_pred EeCCCeEEEEEEeC----------------------------CCCCCcEeEEEC--CCCeEC--ccCCceEEEEEcCCCe
Confidence 45788889999876 443 46789987 544211 1111111111112345
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWL 251 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~ 251 (616)
..|.|.+++.+|.|.|+|.|.|..|..... .+.+.. ..+|.+ ...+....+.+|+.+.|.|.+.+.|.+.+.|+
T Consensus 62 ~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~----~~~l~v-~~~~~~-~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~ 135 (291)
T 1qz1_A 62 STLTIYNANIDDAGIYKCVVTAEDGTQSEA----TVNVKI-FQKLMF-KNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWK 135 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSCEEEE----EEEEEE-ECCSEE-EECCSSEEEETTSCEEECCEEECSSCCEEEEE
T ss_pred EEEEEecCCCCCCEEEEEEEEcCCCCeeEE----EEEEEe-eccccc-cCCCCcccccCCCeEEEEEEeccCCCCEEEEE
Confidence 589999999999999999999987642111 122211 234555 34456778999999999999999999999999
Q ss_pred ECCeeeccc--CcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc--eeeEEEEEecCCCCCCCC--ccceeecCC
Q psy12426 252 CNDITIISK--DRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD--KGTAKVTVLDIPSPPEGP--LKPSNITKS 325 (616)
Q Consensus 252 ~~~~~~~~~--~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~--~~~~~l~v~~~p~~p~~~--~~~~~~~~~ 325 (616)
+++..+... .++..... ..|.|.++...|.|.|+|.|.|..+.. .....+.+..+|.....+ .......+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~ 212 (291)
T 1qz1_A 136 HKGRDVILKKDVRFIVLSN---NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQ 212 (291)
T ss_dssp ETTSCSSTTCCTTEEECTT---SCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCC
T ss_pred ECCEEcccCCCceEEEccC---CcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCc
Confidence 999876533 33333322 379999999999999999999865433 344555565554322211 122334567
Q ss_pred eEEEEEeCCCCCCCCceEEEEEEEEeCCC----CC----EEEccccccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 326 SCNLEWRAPRDDGGTDILHYVVEKMDMET----GR----WVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 326 ~~~l~W~~~~~~~~~~i~~y~v~~~~~~~----~~----~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
.+.|.|...... ... +.|...+. .. .... ......+.|.++...+.+.|+|.|.|..|..
T Consensus 213 ~v~l~C~~~g~p----~p~--i~W~~~g~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 280 (291)
T 1qz1_A 213 SVTLVCDADGFP----EPT--MSWTKDGEPIENEEEDDEKHIF-SDDSSELTIRNVDKNDEAEYVCIAENKAGEQ 280 (291)
T ss_dssp CEEEEEEEEEES----CCE--EEEEETTEECCCC--CCSSEEE-CTTSCEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred eEEEEEEEEEeC----CCc--EEEEECCEECcCCCCCCcceEE-cCCCcEEEEEecChhcCEEEEEEEEeCCCce
Confidence 888998753221 112 22222111 00 0111 1224578999999999999999999999864
No 182
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.64 E-value=9.7e-15 Score=135.36 Aligned_cols=133 Identities=13% Similarity=0.086 Sum_probs=91.7
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCC--CCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc--
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS--DPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP-- 246 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s--~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~-- 246 (616)
...|.|.+++++|.|.|+|.|.|..|..... .....+.+. .+|.+ ...+..+.+.+|++++|.|.+.+.+.+
T Consensus 78 ~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~---~~~~v-~~~p~~~~v~~G~~v~L~C~~~~~~~~~~ 153 (256)
T 1nqb_A 78 TAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS---SDIEL-TQTPLSLPVSLGDQASISCRSSQSIVHSN 153 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC---CCCCE-EEECSEEEECTTCCEEEEEEESSCCBCTT
T ss_pred EEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeec---ccccE-EecCcEEEEecCCcEEEEeEecCcccccc
Confidence 3479999999999999999999986631111 011112222 23443 334566788999999999999998875
Q ss_pred ---eeEEEE--CCeeec------------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eeeEEEEEe
Q psy12426 247 ---TKEWLC--NDITII------------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAKVTVL 307 (616)
Q Consensus 247 ---~~~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~l~v~ 307 (616)
.+.|++ ++..+. ...++..........|.|.+++..|+|.|+|.|.|..+.. .....|.|.
T Consensus 154 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 154 GNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp SCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred cceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEE
Confidence 999999 554331 1345665555566789999999999999999999854322 233445554
No 183
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.64 E-value=8.6e-15 Score=136.13 Aligned_cols=141 Identities=8% Similarity=0.025 Sum_probs=91.1
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCC-CCCCCCEEeccc-----------cCCCceeccCCcceEEEcCCeEEEEEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEP-SDPTAPHIARAK-----------KVSPYINRDQLSDIKVRAGSNFEFDIN 239 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~-s~~~~~~~~~~~-----------~~~P~~~~~~~~~~~v~~g~~~~l~c~ 239 (616)
..|.|.+++++|.|.|.|.|.|..+.... ......+.+... ..+|.+ ...+....+.+|++++|.|.
T Consensus 86 ~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~G~~v~L~C~ 164 (257)
T 3gkz_A 86 VYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVL-TQSPAIMSASPGEKVTLTCS 164 (257)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCE-ECSCSEEEECTTCCEEEEEE
T ss_pred EEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEE-EcCCceEEEeCCCcEEEEEE
Confidence 37999999999999999999986322110 001111222221 112333 44456688999999999999
Q ss_pred EeeecCc-eeEEEEC--Ceeec------------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eeeEE
Q psy12426 240 VIGEPIP-TKEWLCN--DITII------------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAK 303 (616)
Q Consensus 240 ~~~~p~~-~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~ 303 (616)
+.+.+.+ .+.|++. +..+. ...++.....+....|.|.+++..|+|.|.|.|.+..... .....
T Consensus 165 ~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~ 244 (257)
T 3gkz_A 165 ASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTK 244 (257)
T ss_dssp ESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEE
T ss_pred EccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEE
Confidence 9998887 9999983 22211 0245555555566789999999999999999998754332 23344
Q ss_pred EEEecCCCCC
Q psy12426 304 VTVLDIPSPP 313 (616)
Q Consensus 304 l~v~~~p~~p 313 (616)
|.+...+..|
T Consensus 245 l~v~~~~~~~ 254 (257)
T 3gkz_A 245 LEIKRAPHHH 254 (257)
T ss_dssp EEECCC----
T ss_pred EEEEeCCCCC
Confidence 5565544433
No 184
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.64 E-value=3.2e-15 Score=132.93 Aligned_cols=131 Identities=15% Similarity=0.031 Sum_probs=77.5
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecC---ceeE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI---PTKE 249 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~---~~~~ 249 (616)
.|.|.+++..|.|.|+|.|.|..|.... ...+.+...+..|.+ . +. ..+.+|+.+.|.|.+.+.++ +.+.
T Consensus 55 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~---~~~l~V~~~p~~~~~--~-~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~ 127 (202)
T 1vca_A 55 TLTMNPVSFGNEHSYLCTATCESRKLEK---GIQVEIYSFPKDPEI--H-LS-GPLEAGKPITVKCSVADVYPFDRLEID 127 (202)
T ss_dssp EEEESSCCGGGCSEEEEEEEETTEEEEE---EEEEEEEBCCSCCEE--E-ES-SCEETTSCEEEEEEEEEEBSGGGEEEE
T ss_pred EEEECcCCHHHCEEEEEEEEECCceEee---EEEEEEEeCCCCCEe--C-Cc-eEEcCCCCEEEEEEECCcCCCCCeEEE
Confidence 4566666666666677766665543111 111222211122222 1 11 45789999999999998744 3799
Q ss_pred EEECCeeecccCcEEEE----ecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-------eeeEEEEEecCC
Q psy12426 250 WLCNDITIISKDRFKIV----NDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-------KGTAKVTVLDIP 310 (616)
Q Consensus 250 W~~~~~~~~~~~~~~~~----~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-------~~~~~l~v~~~p 310 (616)
|++++..+......... .......|.|.....++.|.|+|.|.|..|.. ..+..|.|..+|
T Consensus 128 W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P 199 (202)
T 1vca_A 128 LLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP 199 (202)
T ss_dssp EEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC
T ss_pred EEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCC
Confidence 99999876532100000 00112356788888788999999999987752 345556666554
No 185
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.63 E-value=2.5e-14 Score=133.47 Aligned_cols=233 Identities=9% Similarity=0.016 Sum_probs=155.5
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCccc-ccEEEEeeccCcccccccCCCceEecccCCCC
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLK-DSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDT 171 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (616)
+.+|+...+.|.+. +.|.+ .+.|++ ++.. +....
T Consensus 13 v~~G~~v~l~C~~~----------------------------~~~~~~~~~W~~--~g~~---------------~~~~~ 47 (262)
T 3rjd_A 13 VFQEETVTLHCEVL----------------------------HLPGSSSTQWFL--NGTA---------------TQTST 47 (262)
T ss_dssp EETTCCEEEEEECS----------------------------SCCCTTCEEEEE--TTEE---------------CSCCS
T ss_pred eeCCCeEEEEEECC----------------------------CCCCCceEEEEE--CCEE---------------eeccC
Confidence 45788888999864 44444 799998 4211 11234
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE-eeecCceeEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKEW 250 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~-~~~p~~~~~W 250 (616)
..|.|.++..+|.|.|+|.|.|..+... ..+.+. .+|.. ..+....+.+|+.+.|.|.+ .+.|.+.+.|
T Consensus 48 ~~l~i~~~~~~d~G~Y~C~~~~~~~s~~-----~~l~v~---~~~~~--~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W 117 (262)
T 3rjd_A 48 PSYRITSASVNDSGEYRCQRGLSGRSDP-----IQLEIH---RGWLL--LQVSSRVFTEGEPLALRCHAWKDKLVYNVLY 117 (262)
T ss_dssp SEEEESSCCGGGCEEEEEEESSSCCCCC-----EEEEEE---CSSEE--EEESCSEEETTSCEEEEEEEGGGCCCEEEEE
T ss_pred CeEEEecCCcccCeEEEEEEecCCcccc-----EEEEEe---ccceE--ecCCCeEEecCCeEEEEEEccCCCCCceEEE
Confidence 5899999999999999999987544321 123222 22222 22345678899999999999 6778889999
Q ss_pred EECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCC--ccceeecCCeEE
Q psy12426 251 LCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGP--LKPSNITKSSCN 328 (616)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~--~~~~~~~~~~~~ 328 (616)
++++..+... .....|.|.++...|.|.|+|.+.|..+.......+.+...+.+|.-. .......+..+.
T Consensus 118 ~~~g~~~~~~--------~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~ 189 (262)
T 3rjd_A 118 YRNGKAFKFF--------HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVT 189 (262)
T ss_dssp EETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEE
T ss_pred EECCcccccc--------CCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceeecCCCeEE
Confidence 9998876421 112379999999999999999999988777777888887654333210 112345678899
Q ss_pred EEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 329 LEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 329 l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
|.|....... .+...+.+.|...+. .. ........+.|.++...+.+.|.|.|.|..|..
T Consensus 190 l~C~~~~~p~-~p~~~~~~~w~~~~~-~~--~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 190 LSCETKLLLQ-RPGLQLYFSFYMGSK-TL--RGRNTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp EEEECCCCCC------EEEEEEETTE-EE--EEEESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred EEeEcccCCC-CCCccEEEEEEeCCc-Ee--cccCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 9998643321 022223333333221 11 111334578899999999999999999999863
No 186
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.63 E-value=6.1e-16 Score=139.60 Aligned_cols=148 Identities=16% Similarity=0.191 Sum_probs=113.0
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCC-CCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDL-KEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L-~p~t~Y~~~v~a~ 486 (616)
.+|++|.++.+...+.+++.|+|.+|...+ . ..+|.|+|+..++.+..+.........++|.+| .+++.|.|+|.|.
T Consensus 6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~-~-~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A~ 83 (215)
T 1bqu_A 6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETH-L-ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAE 83 (215)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECCSCCS-S-CCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEE
T ss_pred CCCCCCEeeEeEECCCCcEEEEcCCCCCCC-C-CceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEEEE
Confidence 578899999998888899999999876543 3 478999998765432223334556789999999 9999999999999
Q ss_pred cCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCCeEE
Q psy12426 487 NKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKPEAT 566 (616)
Q Consensus 487 n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~ 566 (616)
|..|.+. +.... +.... ...|.+|.++.+.
T Consensus 84 n~~G~~~-s~~~~-~~~~~------------------------------------------------~~~p~pP~~~~~~ 113 (215)
T 1bqu_A 84 NALGKVT-SDHIN-FDPVY------------------------------------------------KVKPNPPHNLSVI 113 (215)
T ss_dssp ETTEEEE-CCCEE-ECGGG------------------------------------------------SEECCCCEEEEEE
T ss_pred ecccCcc-CCcEE-ecccc------------------------------------------------cCcCCCCCceEEE
Confidence 9999876 22111 11100 1346788888776
Q ss_pred ee--cCCcEEEEeeCCCCCCCCceeeeEEEEeecCCCCeEEccC
Q psy12426 567 DV--DKDHIKIKWQQPISNGGSAIKGYEVERRERTSGRWIKITP 608 (616)
Q Consensus 567 ~~--~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~w~~~~~ 608 (616)
.. +.+++.|+|++|... ++.|.+|+|+|+..++..|..+..
T Consensus 114 ~~~~~~~sv~l~W~~p~~~-~~~i~~Y~v~y~~~~~~~~~~~~~ 156 (215)
T 1bqu_A 114 NSEELSSILKLTWTNPSIK-SVIILKYNIQYRTKDASTWSQIPP 156 (215)
T ss_dssp CC--CCSCEEEEEECCGGG-GTSCEEEEEEEEETTCSSCEECCG
T ss_pred EecCCCceEEEEEeCCCCC-CcceEEEEEEEccCCCCCceEecc
Confidence 54 779999999988654 688999999999988889998753
No 187
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.63 E-value=4e-16 Score=158.51 Aligned_cols=238 Identities=13% Similarity=0.063 Sum_probs=132.8
Q ss_pred EecCCCeEEEEEEEeee-cC-CeeeeeeCCeeeee---------ccceEEEeecCCCCCceeEeeeccCCccceeecccc
Q psy12426 13 KLSAGTTLKFDANIIGE-PV-PHVDWRAGGNPLNL---------RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQT 81 (616)
Q Consensus 13 ~v~~g~~v~l~C~~~g~-P~-p~v~W~~~~~~l~~---------~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~ 81 (616)
.+.+|+.+.|.|.+.|. |. |.|+|+|++..+.. .|.|..
T Consensus 143 ~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~------------------------------ 192 (457)
T 1hzh_H 143 KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL------------------------------ 192 (457)
T ss_dssp CCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEE------------------------------
T ss_pred cccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEE------------------------------
Confidence 36799999999999887 65 79999999975421 222211
Q ss_pred CCCCCceEecCcccCCeEEEEEEEEcCCCCCCCCCC--------------------CCcceeecCCCc-----------e
Q psy12426 82 EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDP--------------------TAPHIARAKKGK-----------C 130 (616)
Q Consensus 82 ~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~~~--------------------~~~~~~~~~~p~-----------~ 130 (616)
...|.|.++...| |.|.|.|.|..+....... .....+....|. .
T Consensus 193 ---~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~ 268 (457)
T 1hzh_H 193 ---SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPE 268 (457)
T ss_dssp ---EEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCC
T ss_pred ---EEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceE
Confidence 1368889998888 9999999997765211000 001111111111 1
Q ss_pred ee--eecCccc----ccEEEEeeccCcccccccCCCceEecccCCCCCeEEeec---ccCCC---eEEEEEEEEeCCCCC
Q psy12426 131 YH--LVGTLLK----DSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLD---LIEGN---QYEFRVLAVNKGGPG 198 (616)
Q Consensus 131 ~~--~~g~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~---l~~~~---~~~y~c~a~n~~g~~ 198 (616)
+. ..|.+.+ .+.|++ ++..+. ......... .....|.|.. +...| .|.|+|.|.|..+..
T Consensus 269 L~C~~~g~~p~p~~~~i~W~k--~~~~~~----~~~~~~~~~--~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 269 VTCVVVDVSHEDPEVKFNWYV--DGVEVH----NAKTKPREE--QYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 340 (457)
T ss_dssp EEEEEECCCTTCCCCEEEEEE--TTEEEC----CCEEEEEEE--CTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSS
T ss_pred EEEEEEcccCCCCceEEEEEe--CCcccc----cccccccee--cCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCC
Confidence 11 2265443 799998 532221 110001111 1122344332 23444 899999999865432
Q ss_pred CCCCCCCCEEe-ccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc--eeEEEECCeeecccCcEEE--EecCC---
Q psy12426 199 EPSDPTAPHIA-RAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP--TKEWLCNDITIISKDRFKI--VNDDK--- 270 (616)
Q Consensus 199 ~~s~~~~~~~~-~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~--~~~W~~~~~~~~~~~~~~~--~~~~~--- 270 (616)
... ..+.. .....+|.+....+....+..|+ +.|.|.+.|.+++ .+.|+++|..+........ ..++.
T Consensus 341 ~~~---~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~ 416 (457)
T 1hzh_H 341 PIE---KTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFL 416 (457)
T ss_dssp CEE---EEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEE
T ss_pred cce---EEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEE
Confidence 211 11111 02345666653333322333444 9999999997554 8999999988753322111 11111
Q ss_pred ceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 271 STKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 271 ~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
...|.|......+.|.|+|.|.|..-
T Consensus 417 ~s~l~i~~~~~~~~g~YtC~a~n~~l 442 (457)
T 1hzh_H 417 YSKLTVDKSRWQQGNVFSCSVMHEAL 442 (457)
T ss_dssp EEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEEEEEChHHccCCCeEEEEEEECCC
Confidence 12345555544678999999999643
No 188
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.63 E-value=3.5e-14 Score=136.50 Aligned_cols=259 Identities=8% Similarity=-0.046 Sum_probs=153.2
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCcccccEEEEeeccCcccccccCCCceEecccCCCCC
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTP 172 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (616)
+.+|+.-.+.|.+. |. .+.|.|++ ++..+. .. ........
T Consensus 35 v~~G~~v~L~C~~~----------------------------~~-~~~~~W~k--~g~~~~--------~~-~~~~~~~~ 74 (316)
T 3vh8_G 35 VPRGGHVTLRCHYR----------------------------HR-FNNFMLYK--EDRIHI--------PI-FHGRIFQE 74 (316)
T ss_dssp EETTSCEEEEEEBT----------------------------TB-CCSEEEEE--SSCSSS--------CH-HHHCCBSS
T ss_pred cCCCCCEEEEEEcc----------------------------CC-CceEEEEe--CCCccc--------ee-ecCCcceE
Confidence 45888899999875 33 35689998 532211 00 11123455
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCC--CCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPT--APHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 250 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~--~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W 250 (616)
.|.|.+++..|.|.|+|.|.|..+....+... ..+.+.....+|.+... +.. .+.+|+.+.|.|.+. .+.+.+.|
T Consensus 75 ~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~-~~~-~v~~G~~v~L~C~~~-~~~~~~~w 151 (316)
T 3vh8_G 75 SFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAH-PGP-LVKSGERVILQCWSD-IMFEHFFL 151 (316)
T ss_dssp CEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEE-SCS-EEETTCCEEEEEEES-SCCSEEEE
T ss_pred EEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEec-CCC-ccCCCCeEEEEEcCC-CCCcEEEE
Confidence 89999999999999999998765432222222 22333333445665432 233 388999999999995 45678999
Q ss_pred EECCeeecccCcE-EEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-----eeeEEEEEecCCCCCCCCc--cceee
Q psy12426 251 LCNDITIISKDRF-KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-----KGTAKVTVLDIPSPPEGPL--KPSNI 322 (616)
Q Consensus 251 ~~~~~~~~~~~~~-~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-----~~~~~l~v~~~p~~p~~~~--~~~~~ 322 (616)
++++..+...... ..........|.|.++...|.|.|+|.|.|..|.. +....+.+...+.+|.-.. .....
T Consensus 152 ~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~ 231 (316)
T 3vh8_G 152 HKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQ 231 (316)
T ss_dssp EETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCC
T ss_pred EECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeec
Confidence 9998876432211 11112234589999999999999999999987742 4456667765444332100 01224
Q ss_pred cCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEE-E----c-cccccceEEeccccCCCeEEEEEEEEecCcCCCCcc
Q psy12426 323 TKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWV-P----M-GDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLV 396 (616)
Q Consensus 323 ~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~-~----~-~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~ 396 (616)
.+..+.|.|.... +...|. |...+..... . . .......+.|.++. +.+.|+|.|.|..+...++.
T Consensus 232 ~G~~v~L~C~~~~-----~~~~~~--W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~ 302 (316)
T 3vh8_G 232 AGESVTLSCSSRS-----SYDMYH--LSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSD 302 (316)
T ss_dssp TTSCCEEEEEESS-----CCSEEE--EEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECC
T ss_pred CCCcEEEEEECCC-----CCcEEE--EEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccC
Confidence 5778999998632 112233 3222221111 1 0 11123568888888 78999999999877544444
Q ss_pred ccCCEEc
Q psy12426 397 CQSPITA 403 (616)
Q Consensus 397 ~s~~~~~ 403 (616)
.+..+.+
T Consensus 303 ~S~~~~l 309 (316)
T 3vh8_G 303 PSDPLLV 309 (316)
T ss_dssp CCCCEEC
T ss_pred CCCcEEE
Confidence 4555544
No 189
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.63 E-value=5.7e-15 Score=141.90 Aligned_cols=241 Identities=12% Similarity=0.039 Sum_probs=152.2
Q ss_pred cCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccc--
Q psy12426 135 GTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK-- 212 (616)
Q Consensus 135 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~-- 212 (616)
|.|.+.+.|++ ++..+. ........ ..+....|.|.++...|.|.|+|.|.|..|... + ..+.+...
T Consensus 28 ~~p~~~v~W~k--~~~~i~---~~~~~~~~--~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s---~~l~v~~~~~ 96 (312)
T 2y23_A 28 MTPKSEFSWSK--DYVSTE---DSPRLEVE--SKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-S---YLIDEEELKR 96 (312)
T ss_dssp CCTTCCEEEEE--TTEECT---TCTTEEEE--EETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-E---EEECHHHHHH
T ss_pred CCCCcEEEEEE--CCEECC---CCCCEEEE--EeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-E---EEEEEeeeee
Confidence 45667899999 532222 22222221 134446899999999999999999999887432 1 11221110
Q ss_pred -------cCCCceeccCCcceEEEcCCeEEEEEEEe-eecCceeEEEECCeeecccCcEEEEec--CCceEEEecCCCCC
Q psy12426 213 -------KVSPYINRDQLSDIKVRAGSNFEFDINVI-GEPIPTKEWLCNDITIISKDRFKIVND--DKSTKLKVFDSKRG 282 (616)
Q Consensus 213 -------~~~P~~~~~~~~~~~v~~g~~~~l~c~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~l~~~ 282 (616)
..+|.+.........+..|+.+.|.|.+. +.|.+.+.|++++..+....++.+... .....|.|.++...
T Consensus 97 ~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~ 176 (312)
T 2y23_A 97 LLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDE 176 (312)
T ss_dssp HHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGG
T ss_pred eecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcc
Confidence 01555543333477889999999999999 889999999999999987777766653 44567999999999
Q ss_pred CcEEEEEEEEcCCCCceeeEEEEE-------------------ecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceE
Q psy12426 283 DSGIYTLAVKNSWGTDKGTAKVTV-------------------LDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDIL 343 (616)
Q Consensus 283 ~~g~y~c~a~n~~g~~~~~~~l~v-------------------~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~ 343 (616)
|.|.|+|.+.+..+.......+.. ...|.... ++......+..+.|.|..........+.
T Consensus 177 d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~v~~G~~~~l~C~~~~~p~~~~v~ 255 (312)
T 2y23_A 177 DEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE-YLSWEVTGECNVLLKCKVANIKKETHIV 255 (312)
T ss_dssp GCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEE-EEEEEEETTTEEEEEEEEESCCSSCEEE
T ss_pred cCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceee-cceEEEeCCCEEEEEEEEcCCCCCCEEE
Confidence 999999999875443332222210 00111100 1223445678899999864332111222
Q ss_pred EEEEEEEeCCCCCEEEcc----ccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 344 HYVVEKMDMETGRWVPMG----DVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 344 ~y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
|...+. ...... ......+.|.++...+.+.|+|.|.|..|...
T Consensus 256 -----W~~~g~-~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~ 303 (312)
T 2y23_A 256 -----WYKDER-EISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDK 303 (312)
T ss_dssp -----EEETTE-EEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEE
T ss_pred -----EeeCCE-ECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCcee
Confidence 221110 000000 12235789999999999999999999998753
No 190
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.63 E-value=2.9e-15 Score=133.48 Aligned_cols=145 Identities=21% Similarity=0.417 Sum_probs=101.4
Q ss_pred CCCCCEEEEec--CCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEc
Q psy12426 412 RPGQPTVTDWG--KDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACIVPANITATSVPDLKEGEEYEFRVIAVN 487 (616)
Q Consensus 412 ~p~~~~~~~~~--~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n 487 (616)
+|.++.+..++ .+++.|+|.+| .+..+.+|.|+|+..+. .|... .+.++...++|.+|.|++.|.|+|+|.|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p---~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~a~n 77 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAP---QPSHISKYILRWRPKNSVGRWKEA-TIPGHLNSYTIKGLKPGVVYEGQLISIQ 77 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECC---SSTTCCEEEEEEEETTCSSCCEEE-EECTTCCEEEECSCCTTEEEEEEEEEEC
T ss_pred CceeEEEEecCCCCCEEEEEEeCC---CCCCceEEEEEEEECCCCCceEEE-ecCCCccEEEecCCCCCCEEEEEEEEEe
Confidence 57788887777 89999999987 24479999999997654 55543 4566788999999999999999999999
Q ss_pred CCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCC-----CCCC
Q psy12426 488 KGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPG-----KPSK 562 (616)
Q Consensus 488 ~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~P~~ 562 (616)
..|.|+++. ..+.+... .+|... .+....+. .|.+
T Consensus 78 ~~G~~~~~~-~~~~t~~~--~~~~~~-------------------------------------~~~~~~~~~~p~~~~~~ 117 (201)
T 2ha1_A 78 QYGHQEVTR-FDFTTTST--STPVTS-------------------------------------NTVTGETTPFSPLVATS 117 (201)
T ss_dssp TTSCEEEEE-EEEEECCC--CCTTCS-------------------------------------CCCCCSCCCCCCSCSCC
T ss_pred cccccCcee-EEEecCCC--CCCccc-------------------------------------ccccCCCCCCCCccCCc
Confidence 999987531 11111110 000000 00001111 2256
Q ss_pred CeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCCCeE
Q psy12426 563 PEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRERTSGRWI 604 (616)
Q Consensus 563 ~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~w~ 604 (616)
+++...+.++|.|+|.+| ++.|.+|+|.|+..+.+.|.
T Consensus 118 l~~~~~~~~sv~l~W~~p----~~~i~~Y~v~~~~~~~~~~~ 155 (201)
T 2ha1_A 118 ESVTEITASSFVVSWVSA----SDTVSGFRVEYELSEEGDEP 155 (201)
T ss_dssp SSCCCCCSCCEEEECCCS----CTTEEEEEEEEEETTTCCCC
T ss_pred eEEEecCCCeEEEEEeCC----CCCccEEEEEEEECCCCCce
Confidence 678888999999999988 47899999999976555543
No 191
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.63 E-value=4.8e-15 Score=128.23 Aligned_cols=73 Identities=11% Similarity=0.188 Sum_probs=56.0
Q ss_pred eEEEcCCeEEEEEEEe-eecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCC-ceeeEE
Q psy12426 226 IKVRAGSNFEFDINVI-GEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGT-DKGTAK 303 (616)
Q Consensus 226 ~~v~~g~~~~l~c~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~-~~~~~~ 303 (616)
..+.+|+.+.|.|.+. +.|.+.+.|++++..+... .....|.|.++...|.|.|+|.|.|..|. .+..+.
T Consensus 95 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~ 166 (170)
T 3ry4_A 95 LEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS--------HLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVT 166 (170)
T ss_dssp SEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE--------SSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred ceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc--------CCCCeEEEEeccccCCEEEEEEEEeCcCccccccEE
Confidence 3567899999999994 5566899999998875421 22348999999999999999999998875 344444
Q ss_pred EEE
Q psy12426 304 VTV 306 (616)
Q Consensus 304 l~v 306 (616)
+.|
T Consensus 167 l~V 169 (170)
T 3ry4_A 167 ITV 169 (170)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 192
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.62 E-value=9.5e-15 Score=133.48 Aligned_cols=134 Identities=10% Similarity=-0.028 Sum_probs=84.5
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.+.|..+.+..+.. ..+.+......|.+... + ...+.+|++++|.|.+.+. .+.+.|+|
T Consensus 61 ~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~-~~L~V~~~~~~P~i~~~-p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k 136 (242)
T 1p6f_A 61 KFYIPDMNSRMAGQYSCIYRVGELWSEPSNL-LDLVVTEMYDTPTLSVH-P-GPEVISGEKVTFYCRLDTA-TSMFLLLK 136 (242)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEECCCCCC-EEEEEECCSCCCEEEEE-S-CSEEETTCEEEEEEECTTS-CSEEEEEE
T ss_pred EEEecCCCcccCeEEEEEEecCCccccCCcc-eEEEeecccCCCceEcc-C-CCccCCCCcEEEEEecCCC-CCEEEEEE
Confidence 4666677777777777777665443322221 12333322334555322 2 3468899999999998764 46899999
Q ss_pred CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCC---CCceeeEEEEEecCCCCCC
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSW---GTDKGTAKVTVLDIPSPPE 314 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~---g~~~~~~~l~v~~~p~~p~ 314 (616)
++..+.. ..........|.|.+++..|.|.|+|.+.|.. ...+....|.|...+..|.
T Consensus 137 ~g~~~~~----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P~ 197 (242)
T 1p6f_A 137 EGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTS 197 (242)
T ss_dssp CSSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC------
T ss_pred CCCccCc----cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCCCc
Confidence 9876543 12234455689999999999999999999864 2345667788877655444
No 193
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.62 E-value=2.2e-15 Score=135.87 Aligned_cols=129 Identities=7% Similarity=0.016 Sum_probs=82.9
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccc-cCCCceeccCCcceEEEcCCeEEEEEEEeeec-C-ce
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK-KVSPYINRDQLSDIKVRAGSNFEFDINVIGEP-I-PT 247 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~-~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p-~-~~ 247 (616)
...|.|.+++++|.|.|+|.|.|..|..........+.+... ..+|.+.... ....+..|+.+.|.|.+.+.+ . +.
T Consensus 69 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~~~~~~~g~~v~l~C~~~g~~p~~~~ 147 (213)
T 3mj8_L 69 MATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFP-PSSEELKTNQATLVCMINGFYPADVA 147 (213)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEEC-CCHHHHTTTEEEEEEEEEEEBSSCCE
T ss_pred EEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccC-CCcccccCCcEEEEEEeeceeCCCeE
Confidence 347899999999999999999988762000011122333322 2456554322 222233799999999999863 3 49
Q ss_pred eEEEECCeeecccCcE--EEEecC---CceEEEecCCCCCCcEEEEEEEEcCCCCcee
Q psy12426 248 KEWLCNDITIISKDRF--KIVNDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 300 (616)
Q Consensus 248 ~~W~~~~~~~~~~~~~--~~~~~~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 300 (616)
+.|++++..+..+... .....+ ....|.|.++...|.|.|+|.|.|..+....
T Consensus 148 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 205 (213)
T 3mj8_L 148 VTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEK 205 (213)
T ss_dssp EEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEE
T ss_pred EEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEe
Confidence 9999999987542110 000111 0136899999999999999999998754443
No 194
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.62 E-value=2e-14 Score=135.48 Aligned_cols=135 Identities=10% Similarity=0.083 Sum_probs=91.5
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCC--CCCCCEEecccc------------CCCceeccCCcceEEEcCCeEEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS--DPTAPHIARAKK------------VSPYINRDQLSDIKVRAGSNFEF 236 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s--~~~~~~~~~~~~------------~~P~~~~~~~~~~~v~~g~~~~l 236 (616)
...|.|.+++++|.|.|.|.+.|..|..... .....+.+...+ .+|.+ ...+..+.+.+|++++|
T Consensus 104 ~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~G~~v~L 182 (282)
T 1qok_A 104 TAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVL-TQSPAIMSASPGEKVTI 182 (282)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCE-EEECSEEEECTTCCEEE
T ss_pred eEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEE-ecCCCEEEEcCCCcEEE
Confidence 3479999999999999999999987621100 011123332221 12333 33455678999999999
Q ss_pred EEEEeeecCceeEEEE--CCeeec------------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eee
Q psy12426 237 DINVIGEPIPTKEWLC--NDITII------------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGT 301 (616)
Q Consensus 237 ~c~~~~~p~~~~~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~ 301 (616)
.|.+.+.+ +.+.|+| ++..+. ...++.+...+....|.|.+++..|+|.|.|.|.|..+.. ...
T Consensus 183 ~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~g 261 (282)
T 1qok_A 183 TCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAG 261 (282)
T ss_dssp EEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCC
T ss_pred EEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCC
Confidence 99999999 8999999 554331 1356665555566789999999999999999998853322 234
Q ss_pred EEEEEe
Q psy12426 302 AKVTVL 307 (616)
Q Consensus 302 ~~l~v~ 307 (616)
..|.|.
T Consensus 262 t~l~V~ 267 (282)
T 1qok_A 262 TKLELK 267 (282)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 455554
No 195
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.62 E-value=2.1e-15 Score=135.94 Aligned_cols=125 Identities=8% Similarity=-0.067 Sum_probs=85.1
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEee-ecCc-eeE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPIP-TKE 249 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~~-~~~ 249 (616)
..|.|.+++.+|.|.|+|.|.|..|..... ...+.+.....+|.+....+... +..|+.+.|.|.+.+ .|.+ .+.
T Consensus 71 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~--~~~l~V~~~~~~p~v~~~~~~~~-~~~g~~~~l~C~~~g~~p~~~~v~ 147 (213)
T 3d9a_L 71 FTLSINSVETEDFGMYFCQQSNSWPYTFGG--GTKLEIKRADAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVK 147 (213)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCEECC--CEEEEECCCCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECCCChhhCEEEEEeeecCCcceeCC--CEEEEEecCCCCceeEeECCChh-hcCCCcEEEEEEEeeecCCceEEE
Confidence 379999999999999999999876642211 11244443344666643332222 236889999999988 5554 899
Q ss_pred EEECCeeecccCcEEE--EecC-C----ceEEEecCCCCCCcEEEEEEEEcCCCCce
Q psy12426 250 WLCNDITIISKDRFKI--VNDD-K----STKLKVFDSKRGDSGIYTLAVKNSWGTDK 299 (616)
Q Consensus 250 W~~~~~~~~~~~~~~~--~~~~-~----~~~l~i~~l~~~~~g~y~c~a~n~~g~~~ 299 (616)
|++++..+........ .... + ...|.|.++...|.|.|+|.|.|......
T Consensus 148 W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3d9a_L 148 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 204 (213)
T ss_dssp EEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSC
T ss_pred EEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCc
Confidence 9999998765411111 1111 1 23899999999999999999999765543
No 196
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.61 E-value=2.5e-14 Score=132.87 Aligned_cols=124 Identities=11% Similarity=0.044 Sum_probs=86.2
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCC----------CCCCCCCCCCCEEeccccC------------CCceeccCCcceEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKG----------GPGEPSDPTAPHIARAKKV------------SPYINRDQLSDIKV 228 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~----------g~~~~s~~~~~~~~~~~~~------------~P~~~~~~~~~~~v 228 (616)
...|.|.+++++|.|.|.|.|.|.. +..... ....+.+..... +|.+ ...+..+.+
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v 161 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWG-KGTTVIVSSGGGGSGGGGSGGGGSEIVL-TQAPGTLSL 161 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEEC-CCEEEEECSCC----------CCCCCCE-EEECSEEEE
T ss_pred EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEEC-CceEEeecCCcccccccccCCCcceeEE-EecCCeEEE
Confidence 3479999999999999999998861 111111 111233322111 2333 444667889
Q ss_pred EcCCeEEEEEEEeeecC-ceeEEEEC--Ceeec------------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 229 RAGSNFEFDINVIGEPI-PTKEWLCN--DITII------------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 229 ~~g~~~~l~c~~~~~p~-~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|++++|.|.+.+.+. +.+.|++. +..+. ...++.+...+....|.|.+++..|+|.|.|.|.|
T Consensus 162 ~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 241 (256)
T 3juy_B 162 SPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYG 241 (256)
T ss_dssp CTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECC
T ss_pred eCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEee
Confidence 99999999999999886 89999983 22211 23566666566667899999999999999999988
Q ss_pred CCC
Q psy12426 294 SWG 296 (616)
Q Consensus 294 ~~g 296 (616)
..+
T Consensus 242 ~~~ 244 (256)
T 3juy_B 242 ASS 244 (256)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 197
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.61 E-value=1.9e-14 Score=132.06 Aligned_cols=124 Identities=15% Similarity=0.108 Sum_probs=82.6
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCC--CCCCCEEeccccC---C------CceeccCCcceEEEcCCeEEEEEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS--DPTAPHIARAKKV---S------PYINRDQLSDIKVRAGSNFEFDIN 239 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s--~~~~~~~~~~~~~---~------P~~~~~~~~~~~v~~g~~~~l~c~ 239 (616)
...|.|.+++++|.|.|+|.|.|..|..... .....+.+..... + +.+ ...+..+.+.+|+.+.|.|.
T Consensus 72 ~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v-~~~p~~~~v~~G~~v~L~C~ 150 (238)
T 2p1y_A 72 NFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQV-RQSPQSLTVWEGETAILNCS 150 (238)
T ss_dssp BCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCC-EEECSEEEEETTSCEEEEEE
T ss_pred eEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeE-EccCceEEEeCCCeEEEEEE
Confidence 3479999999999999999999986531110 0011122221110 0 122 23355678999999999999
Q ss_pred EeeecCceeEEEECCe-----ee---------cccCcEEEE--ecCCceEEEecCCCCCCcEEEEEEEEcCC
Q psy12426 240 VIGEPIPTKEWLCNDI-----TI---------ISKDRFKIV--NDDKSTKLKVFDSKRGDSGIYTLAVKNSW 295 (616)
Q Consensus 240 ~~~~p~~~~~W~~~~~-----~~---------~~~~~~~~~--~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 295 (616)
+.+.|.+.+.|++++. .+ ....++.+. .......|.|.+++..|+|.|+|.|.|..
T Consensus 151 ~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 151 YENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9999999999999641 11 123455554 23445789999999999999999999974
No 198
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.61 E-value=1.2e-14 Score=117.01 Aligned_cols=105 Identities=23% Similarity=0.422 Sum_probs=87.1
Q ss_pred cCCEEccCCCCCCCCCCCCEEE-EecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEeecCCccEEEcCCCC
Q psy12426 398 QSPITAKDPFGRPDRPGQPTVT-DWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACIVPANITATSVPDLK 474 (616)
Q Consensus 398 s~~~~~~~~~~~p~~p~~~~~~-~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~~~~~~~~~~l~~L~ 474 (616)
+..+.+.+....|++|.++.+. .++.+++.|+|.+|..+++.+|.+|.|+|+..+. .|..... +....+++.+|.
T Consensus 6 S~~~~~~t~~~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~v~~L~ 83 (120)
T 2crm_A 6 SGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS--GATREHLCDRLN 83 (120)
T ss_dssp CSCCSCCSCCCCCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC--SSCSEEEECSCC
T ss_pred cCCEEEEeCCCCCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEe--ccccEEEECCCC
Confidence 4455566677889999999887 7889999999998877767789999999998764 6776533 457899999999
Q ss_pred CCCeEEEEEEEEcCCCCCCCCCCCCCEEec
Q psy12426 475 EGEEYEFRVIAVNKGGPGEPSKASAPVTCK 504 (616)
Q Consensus 475 p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~ 504 (616)
|++.|.|||+|+|..|.|++|......|..
T Consensus 84 p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 84 PGCFYRLRVYCISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp TTSCEEEEEEEEETTEECCCCCCCCCCCCC
T ss_pred CCCEEEEEEEEEcCCccCCCcccEEEEcCC
Confidence 999999999999999999999877665543
No 199
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.61 E-value=2.9e-14 Score=139.58 Aligned_cols=201 Identities=11% Similarity=-0.027 Sum_probs=106.0
Q ss_pred cCCCCCCcEEEEEEEEcC----CCCc--e-eeEEEEEec----CCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEE
Q psy12426 277 FDSKRGDSGIYTLAVKNS----WGTD--K-GTAKVTVLD----IPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHY 345 (616)
Q Consensus 277 ~~l~~~~~g~y~c~a~n~----~g~~--~-~~~~l~v~~----~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y 345 (616)
..+.....|.|++.|.|. .|.+ + .+...+... +|.+|.+ +.+.......+.++|+++... .....|
T Consensus 93 ~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~n-l~C~~~~~~~l~csW~p~~~~--~~~~~Y 169 (380)
T 3lb6_C 93 DGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQD-MDCVYYNWQYLLCSWKPGIGV--LLDTNY 169 (380)
T ss_dssp EECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEE-EEEEEETTTEEEEEEECC--------CCE
T ss_pred EeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcE-eEEEECCCcEEEEEEcCCCCC--CCCccE
Confidence 344557899999999953 3433 2 232333222 2334444 666677888999999975432 346789
Q ss_pred EEEEEeCCCCCEEEccc-----cccceEEec--cccCCCeEEEEEEEEecCcCCCCccccCCEEccCC-CCCCCCCCCCE
Q psy12426 346 VVEKMDMETGRWVPMGD-----VSGTYTRAE--NLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDP-FGRPDRPGQPT 417 (616)
Q Consensus 346 ~v~~~~~~~~~~~~~~~-----~~~~~~~i~--~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~-~~~p~~p~~~~ 417 (616)
.+.++..+...+..+.. .....+.+. ++...+.|.++|.|.|..|.+... .+.+... ..+|++|.++.
T Consensus 170 ~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~----~~~~~~~~~v~p~pP~~l~ 245 (380)
T 3lb6_C 170 NLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSS----YFTFQLQNIVKPLPPVYLT 245 (380)
T ss_dssp EEEEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CCCE----EEEECGGGSCCCCCCEEEE
T ss_pred EEEEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeeccc----cEEEcHHHcccCCCCceEE
Confidence 99998755444444321 122245555 567788999999999988865432 1223222 24688888988
Q ss_pred EEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCC-CCCCCeEEEEEEEEcC
Q psy12426 418 VTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPD-LKEGEEYEFRVIAVNK 488 (616)
Q Consensus 418 ~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~-L~p~t~Y~~~v~a~n~ 488 (616)
+...+.+++.|+|.+|....+..+.+|+|+|+..+..|...... ..+.|.+ |.|++.|.|+|+|...
T Consensus 246 v~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~w~~~~~~----~~~~l~~~L~p~t~Y~~qVRa~~~ 313 (380)
T 3lb6_C 246 FTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTATVE----NETYTLKTTNETRQLCFVVRSKVN 313 (380)
T ss_dssp EC-------CEEEECCSSSCCSTTEEEEECC--------CCEES----SSCC------------CCEEEEEC
T ss_pred EEEcCCCeEEEEECCCCCCCCcceEEEEEEEEeCCCCceEeccc----ceEEEeCccCCCcEEEEEEEEEEc
Confidence 88777889999999886544446889999999865466543321 2467888 9999999999999943
No 200
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.60 E-value=2.4e-15 Score=146.03 Aligned_cols=255 Identities=17% Similarity=0.143 Sum_probs=115.5
Q ss_pred CcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecC-cccccEEEEeeccCcccccccCCCceEecccCCC
Q psy12426 92 DLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGT-LLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGD 170 (616)
Q Consensus 92 ~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (616)
.+.+|+...+.|.+. |. |.+.+.|++ ++..+. .... ....
T Consensus 19 ~v~~G~~v~l~C~~~----------------------------~~~p~~~v~W~k--~g~~~~---~~~~------~~~~ 59 (334)
T 1ry7_B 19 VFGSGDAVELSCPPP----------------------------GGGPMGPTVWVK--DGTGLV---PSER------VLVG 59 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEecCCcEEEEeeCC----------------------------CCCCCcceEEEE--CCeeCC---Cccc------EEec
Confidence 355788888888876 33 456799998 532221 1111 1113
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecccc-------------------CCCceecc---CCcceEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKK-------------------VSPYINRD---QLSDIKV 228 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~-------------------~~P~~~~~---~~~~~~v 228 (616)
...|.|.+++..|.|.|+|.|.|. |.... .. .+.+.... .+|.+... ......+
T Consensus 60 ~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~-~~--~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v 135 (334)
T 1ry7_B 60 PQRLQVLNASHEDSGAYSCRQRLT-QRVLC-HF--SVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAV 135 (334)
T ss_dssp ---------------------------------------------------------------CCCCSCCTTCCCCEEEE
T ss_pred cceEEEeecccccCEEEEEEEEeC-CeEEE-EE--EEEEeccCccccccccccccccccccCCCCEEeccccccceeEEe
Confidence 458999999999999999999998 54221 11 12222111 24444311 1234678
Q ss_pred EcCCeEEEEEEEeeecCceeEEEECCeeecccCcE-EEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy12426 229 RAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRF-KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 307 (616)
Q Consensus 229 ~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 307 (616)
..|+.+.|.|.+.+.|.+.+.|++++..+....++ ..........|.|.++...|.|.|+|.|.|..|.......+.+.
T Consensus 136 ~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 215 (334)
T 1ry7_B 136 PAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVL 215 (334)
T ss_dssp ETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEe
Confidence 89999999999999999999999999887654432 11223345689999999999999999999999888888888887
Q ss_pred cCCC-CCCC----CccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEe--CCC------CCEEEcc--------ccccc
Q psy12426 308 DIPS-PPEG----PLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMD--MET------GRWVPMG--------DVSGT 366 (616)
Q Consensus 308 ~~p~-~p~~----~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~--~~~------~~~~~~~--------~~~~~ 366 (616)
..+. +|.- +.......+..+.|.|..... +...+.+.+.. .+. ....... .....
T Consensus 216 ~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~----p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (334)
T 1ry7_B 216 ERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSD----AQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELE 291 (334)
T ss_dssp CCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCS----SCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCC
T ss_pred cCCCCCCceEecCCCceEEeCCCCEEEEEEEecC----CCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccccccc
Confidence 6432 2211 112344567789999986332 22233332210 100 0000000 01123
Q ss_pred eEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 367 YTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 367 ~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
.+.|.++...+.+.|+|.|.|..|...
T Consensus 292 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 318 (334)
T 1ry7_B 292 VLSLHNVTFEDAGEYTCLAGNSIGFSH 318 (334)
T ss_dssp CEEECSCCTTSCSEEEEEEEESSCCEE
T ss_pred EEEEccCCHHHCEEEEEEEeCCCCeEE
Confidence 699999999999999999999998754
No 201
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.60 E-value=2.4e-14 Score=132.98 Aligned_cols=137 Identities=12% Similarity=0.034 Sum_probs=92.2
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCC--CCCCCCCCCCEEeccc------------c-CCCceeccCCcceEEEcCCeEEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGG--PGEPSDPTAPHIARAK------------K-VSPYINRDQLSDIKVRAGSNFEF 236 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g--~~~~s~~~~~~~~~~~------------~-~~P~~~~~~~~~~~v~~g~~~~l 236 (616)
..|.|.+++++|.|.|.|.|.|..+ ...... ...+.+... . .+|.+ ...+..+.+.+|++++|
T Consensus 81 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~-~~~L~V~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~G~~v~L 158 (256)
T 3umt_A 81 AYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQ-GTTVTVSSGGGGSGGGGSGGGGSTDIQL-TQSPSSLSASLGERVSI 158 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCSTTCCSCEECC-CEEEEECC---------------CCCCE-EEECSEEEECTTCCEEE
T ss_pred EEEEECCCCcccCEEEEEEEccCCCccccEECC-CEEEEEcCCCccccCcccCCCCccccEE-EcCCCeEEEECCCCEEE
Confidence 3699999999999999999988722 111111 112332211 0 14444 34456688999999999
Q ss_pred EEEEeeecCceeEEEEC--Ceeec------------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eee
Q psy12426 237 DINVIGEPIPTKEWLCN--DITII------------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGT 301 (616)
Q Consensus 237 ~c~~~~~p~~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~ 301 (616)
.|.+.+.+.+.+.|++. +..+. ...++.....+....|.|.+++..|+|.|.|.+.|..+.. ...
T Consensus 159 ~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~g 238 (256)
T 3umt_A 159 TCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGG 238 (256)
T ss_dssp EEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCC
T ss_pred EEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCC
Confidence 99999999889999984 22211 1356666666667789999999999999999999854432 334
Q ss_pred EEEEEecCC
Q psy12426 302 AKVTVLDIP 310 (616)
Q Consensus 302 ~~l~v~~~p 310 (616)
..|.|...+
T Consensus 239 t~L~V~~~~ 247 (256)
T 3umt_A 239 TKLEIKRAA 247 (256)
T ss_dssp EEEEEC---
T ss_pred EEEEEECCC
Confidence 556665443
No 202
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.60 E-value=2.1e-14 Score=127.80 Aligned_cols=116 Identities=9% Similarity=0.014 Sum_probs=76.8
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCC---CCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGP---GEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKE 249 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~---~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~ 249 (616)
.|.|.+++..|.|.|+|.|.|..+. +..+ ....+.+.....+|.+.... . ..+.+|+.++|.|.+.+ +.+.+.
T Consensus 64 ~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s-~~~~l~V~~~~~~p~i~~~p-~-~~v~~G~~v~L~C~~~~-~~~~~~ 139 (201)
T 1nkr_A 64 NFSISRMTQDLAGTYRCYGSVTHSPYQVSAPS-DPLDIVIIGLYEKPSLSAQP-G-PTVLAGENVTLSCSSRS-SYDMYH 139 (201)
T ss_dssp EEEESSCCGGGCEEEEEEEEBTTBTTCCCCCC-CCEEEEEECSSCCCEEEEES-C-SEECTTCEEEEEEEESS-CCSEEE
T ss_pred EEEeccCCcccCeEEEEeEecCCCCccccCCC-CCEEEEeeccCCCCceecCC-C-CccCCCCeEEEEEeCCC-CCceEE
Confidence 5778888888888888888765321 1111 11223443334456664332 2 46889999999999886 567899
Q ss_pred EEECCeeecccCcEEEEecC-CceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 250 WLCNDITIISKDRFKIVNDD-KSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 250 W~~~~~~~~~~~~~~~~~~~-~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
|+|++..+...........+ ....|.|.+++ |.|.|+|.|.+.
T Consensus 140 w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 140 LSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred EEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 99999766432211111111 24589999998 999999999875
No 203
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.60 E-value=1.1e-14 Score=132.24 Aligned_cols=135 Identities=12% Similarity=0.142 Sum_probs=92.1
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE-eeecCceeE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKE 249 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~-~~~p~~~~~ 249 (616)
...|.|.+++.+|.|.|+|.+.+.. ... ....+.+......|.+.... ...+..|+.+.|.|.+ .+.|.+.+.
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~~-~~~---~~~~l~V~~~~~~p~i~~~~--~~~v~~G~~~~l~C~~~~g~P~~~v~ 144 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQD-FDS---AAVSLQVAAPYSKPSMTLEP--NKDLRPGNMVTITCSSYQGYPEAEVF 144 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEECC-CCC---CCCCCCCCBCCCCCEEECCC-------CCSEEEEEEEEEEEBSCCEEE
T ss_pred eEEEEECCcccccCEEEEEEEEeCC-Cce---EEEEEEEEcCCCCCcEEeCC--CceecCCceEEEEEecccccCCCeEE
Confidence 4579999999999999999999853 221 12223333333456554322 3467789999999999 788999999
Q ss_pred EEEC-CeeecccCcEEEEec--CCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCC
Q psy12426 250 WLCN-DITIISKDRFKIVND--DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPS 311 (616)
Q Consensus 250 W~~~-~~~~~~~~~~~~~~~--~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~ 311 (616)
|+++ +..+........... +....|.|.++...|.|.|+|.|.|..|.....+.+.+..+|-
T Consensus 145 W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 145 WKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPL 209 (222)
T ss_dssp EECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC---
T ss_pred EEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCcc
Confidence 9994 444433222222222 2234578999999999999999999999999999999887664
No 204
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.60 E-value=9.8e-16 Score=120.50 Aligned_cols=97 Identities=36% Similarity=0.621 Sum_probs=83.1
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
.+|.+|..+.+..++.+++.|+|.+|..+++.+|.+|.|+|+..++ .|............+++.+|.|++.|.|||+|+
T Consensus 9 ~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 88 (112)
T 1bpv_A 9 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAK 88 (112)
T ss_dssp CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEE
T ss_pred CCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecccCccCEEEECCCCCCCEEEEEEEEE
Confidence 5788888899999999999999998888888889999999998765 787765445567899999999999999999999
Q ss_pred cCCCC-CCCCCCCCCEEec
Q psy12426 487 NKGGP-GEPSKASAPVTCK 504 (616)
Q Consensus 487 n~~G~-g~~s~~~~~~~~~ 504 (616)
|..|. |++|..+..+++.
T Consensus 89 N~~G~~s~~S~~~~~~t~~ 107 (112)
T 1bpv_A 89 NAAGAISPPSEPSDAITCR 107 (112)
T ss_dssp CTTSCEEEEEEEEEEECSC
T ss_pred ECCCCCCCCCCCCCCEEeC
Confidence 99997 9988766655544
No 205
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=3.7e-15 Score=121.04 Aligned_cols=115 Identities=20% Similarity=0.297 Sum_probs=93.6
Q ss_pred EEEEEecCcCCCCccccCCEEccCCCCCCC-CCCCCEEEEecCCeEEEEecCCCCC-CCCcceeEEEEEeeCCC-CceEe
Q psy12426 382 RVKAVNKIGESLPLVCQSPITAKDPFGRPD-RPGQPTVTDWGKDHVDLEWTPPKKD-GGSPISQYIIEKKPKYG-PWEKA 458 (616)
Q Consensus 382 ~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~~-~~~~i~~Y~i~~~~~~~-~~~~~ 458 (616)
+|.|.|..|.+.. +..+.+.+....|. +|.++++...+.+++.|+|.+|..+ .++.|.+|.|+|+..+. .|...
T Consensus 3 ~V~A~n~~G~g~~---s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~ 79 (124)
T 2ed9_A 3 SGSSGNRYGPGVS---TDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET 79 (124)
T ss_dssp SCCCCCCCCCCCC---CCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE
T ss_pred eEEEEeCCccCCC---CCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE
Confidence 5778899998876 45556666667777 6779999999999999999988652 45579999999998776 55432
Q ss_pred EeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCE
Q psy12426 459 CIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPV 501 (616)
Q Consensus 459 ~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~ 501 (616)
.......++|.+|.|++.|.|+|+|.|..|.|++|....+.
T Consensus 80 --~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~ 120 (124)
T 2ed9_A 80 --LEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAE 120 (124)
T ss_dssp --ECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEE
T ss_pred --ecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEE
Confidence 55678899999999999999999999999999988765543
No 206
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.60 E-value=7.1e-15 Score=132.44 Aligned_cols=120 Identities=13% Similarity=0.023 Sum_probs=80.6
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEee-ecCceeEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPIPTKEW 250 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~~~~~W 250 (616)
..|.|.+++++|.|.|+|.|.|..+..........+.+.....+|.+.... ....+..|+.+.|.|.+.+ .|.+.+.|
T Consensus 71 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~-~~~~~~~g~~v~l~C~~~g~~P~~~v~W 149 (213)
T 3nl4_L 71 FTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFP-PSADLVATGTVTIVCVANKYFPDVTVTW 149 (213)
T ss_dssp EEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEEC-CCHHHHTTSEEEEEEEEEEEBSCCEEEE
T ss_pred EEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeC-CchhhccCCcEeEEEEEecccCCcEEEE
Confidence 378999999999999999998876531111111223333345566654322 2223456899999999998 89899999
Q ss_pred EECCeeecccCcEEEE--e-cCC----ceEEEecCCCCCCcEEEEEEEE
Q psy12426 251 LCNDITIISKDRFKIV--N-DDK----STKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 251 ~~~~~~~~~~~~~~~~--~-~~~----~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
++++..+..+...... . .+. ...|.|..+..+|.|.|+|.|.
T Consensus 150 ~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 150 EVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred EeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 9999887532101100 0 011 1468899999999999999998
No 207
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.60 E-value=6.6e-15 Score=132.28 Aligned_cols=124 Identities=9% Similarity=-0.025 Sum_probs=82.0
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc-eeE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-TKE 249 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~~~ 249 (616)
..|.|.+++++|.|.|+|.|.|..+..... ...+.+.....+|.+....+... +..|+.+.|.|.+.+. |.+ .+.
T Consensus 70 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~--~~~l~V~~~~~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~ 146 (210)
T 1lk3_L 70 FTLTIDPVEADDTAIYFCQQSWNGPLTFGA--GTKLELKRADAAPTVSIFPPSTE-QLATGGASVVCLMNNFYPRDISVK 146 (210)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCEECC--CEEEEECCCCBCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECCCCHHHCeEEEEEEEcCCCceeCC--CEEEEEcCCCcCCeEEEECCchh-hccCCcEEEEEEEEeEeCCceEEE
Confidence 378999999999999999998876532111 11234333334566643332222 2378999999999975 443 899
Q ss_pred EEECCeeeccc-Cc-EEEEecCC-----ceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 250 WLCNDITIISK-DR-FKIVNDDK-----STKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 250 W~~~~~~~~~~-~~-~~~~~~~~-----~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
|++++..+... .. .......+ ...|.|.++...|.|.|+|.|.|.....
T Consensus 147 W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 147 WKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp EEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred EEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 99999987544 11 11111111 1378999999999999999999975544
No 208
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.60 E-value=1.2e-15 Score=137.65 Aligned_cols=129 Identities=18% Similarity=0.149 Sum_probs=92.3
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE-eeecCcee
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTK 248 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~-~~~p~~~~ 248 (616)
....|.|.+++.+|.|.|+|.|.|..|..... ..+.+. .+|.+.. .+....+..|+.+.|.|.+ .+.|.+.+
T Consensus 82 ~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~---~~l~V~---~~p~~~~-~~~~~~~~~g~~v~l~C~~~~g~p~~~v 154 (214)
T 3jz7_A 82 GDASINVTNLQLSDIGTYQCKVKKAPGVANKK---FLLTVL---VKPSGTR-CFVDGSEEIGNDFKLKCEPKEGSLPLQF 154 (214)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEE---EEEEEE---CCCBSCE-EEEESCCBTTCCEEEEEECSBCCSSCEE
T ss_pred CcccEEEccCChhhCeEEEEEEEeCCCccccE---EEEEEE---cCCCCce-eeeecceecCCcEEEEecCCCCCCCCEE
Confidence 44589999999999999999999987753211 122222 2333321 1122336789999999999 89999999
Q ss_pred EEEECCe--eecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecC
Q psy12426 249 EWLCNDI--TIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDI 309 (616)
Q Consensus 249 ~W~~~~~--~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~ 309 (616)
.|++++. .+...... ......|.|.++...|.|.|+|.|.|..|.....+.|.|..+
T Consensus 155 ~W~~~~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 155 EWQKLSDSQTMPTPWLA----EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp EEEECSTTCCCCGGGGG----GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred EEEECCCCCccCcccee----ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 9999543 33222111 112339999999999999999999999999888888877743
No 209
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.59 E-value=3.9e-14 Score=134.33 Aligned_cols=211 Identities=12% Similarity=0.035 Sum_probs=135.7
Q ss_pred CCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCce-
Q psy12426 169 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPT- 247 (616)
Q Consensus 169 ~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~- 247 (616)
.....|.|.+++..|.|.|+|.|.|..|.... ...+.+. .+|......+....+..|+.+.|.|.+.+.+.+.
T Consensus 48 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~---~~~l~V~---~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~ 121 (289)
T 3ejj_X 48 SPGSTLTTRNATFKNTGTYRCTELEDPMAGST---TIHLYVK---DPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDS 121 (289)
T ss_dssp SSCCEEEESSCCGGGCEEEEEECCC-----CE---EEEEEEC---CSSCSEEESCSEEEEETTSCEEECEEESCGGGGGS
T ss_pred CCccEEEEeeeccccCEEEEEEEeccCCccee---EEEEEEe---CCCcceecccceEEEecCCceEeEEEccCCCcceE
Confidence 44568999999999999999999988775321 1222222 2232223344778899999999999999987775
Q ss_pred eEEEE-CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEE-cCCCCceeeEEEEEecCCC-CCC---CCcccee
Q psy12426 248 KEWLC-NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK-NSWGTDKGTAKVTVLDIPS-PPE---GPLKPSN 321 (616)
Q Consensus 248 ~~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~-n~~g~~~~~~~l~v~~~p~-~p~---~~~~~~~ 321 (616)
+.|++ ++..+....++.+...+ .|.|.++...|.|.|+|.+. +..+.....+.+.+...+. +|. .+.....
T Consensus 122 v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~ 198 (289)
T 3ejj_X 122 VSLMREGGRQVLRKTVYFFSPWR---GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVR 198 (289)
T ss_dssp EEEEEGGGEECCTTCCEEEETTT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEEC
T ss_pred EEEEecCCeecCCCccEEECCCC---CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEE
Confidence 99986 66666666666665444 79999999999999999999 5555556677787774322 221 1111222
Q ss_pred ecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC----CCEEEccc---cccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 322 ITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET----GRWVPMGD---VSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 322 ~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~----~~~~~~~~---~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
..+..+.|.|..... .+... +.|...+. ........ .....+.|.++...+.+.|+|.|.|..|...
T Consensus 199 ~~g~~~~l~C~~~~~---~p~~~--i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 272 (289)
T 3ejj_X 199 IRGEAAQIVCSATNA---EVGFN--VILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRT 272 (289)
T ss_dssp CSSSCEEEEEEEEES---SSCCE--EEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEE
T ss_pred EeCCcEEEEEEeCCC---CCceE--EEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCcc
Confidence 357788888875321 12222 22222111 00000001 2245789999999999999999999998754
No 210
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.59 E-value=6.2e-15 Score=129.25 Aligned_cols=61 Identities=11% Similarity=0.160 Sum_probs=51.1
Q ss_pred EEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 228 VRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 228 v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
+..|+.+.|.|.+ |.+.+.|++++..+..... ....|.|.++...|+|.|+|.|.|..|..
T Consensus 119 ~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 119 SRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA-------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSSSCEEEEECSS---SCSCEEEEETTEECCCSSC-------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred cCCCCeEEEEeeC---CCCeEEEEECCEECcccCC-------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 4489999999988 8899999999998763322 33489999999999999999999987754
No 211
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.59 E-value=7.5e-15 Score=116.31 Aligned_cols=100 Identities=31% Similarity=0.495 Sum_probs=85.6
Q ss_pred CCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEE
Q psy12426 406 PFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVI 484 (616)
Q Consensus 406 ~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~ 484 (616)
+..+|++|.++++..++.+++.|+|.+|..+++.+|.+|.|+|+..+. .|............+++.+|.|++.|.|||+
T Consensus 5 p~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~ 84 (111)
T 1x5y_A 5 SSGPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVV 84 (111)
T ss_dssp CCSCCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEE
T ss_pred CCCCCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEE
Confidence 346889999999999999999999998887777779999999988765 7877654445678999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCEEecc
Q psy12426 485 AVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 485 a~n~~G~g~~s~~~~~~~~~~ 505 (616)
|+|..|.|++|..+..+++..
T Consensus 85 A~n~~G~s~~S~~~~~v~~~~ 105 (111)
T 1x5y_A 85 GVNIAGRSEPATLLQPVTIRE 105 (111)
T ss_dssp EEETTEECCCCCCSSCBCCCC
T ss_pred EEcCCcCCCCccCCCCEEecC
Confidence 999999999998876666543
No 212
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.59 E-value=2.7e-14 Score=134.13 Aligned_cols=137 Identities=13% Similarity=0.058 Sum_probs=88.4
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecccc----------CCCceeccCCcceEEEcCCeEEEEEEEe
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKK----------VSPYINRDQLSDIKVRAGSNFEFDINVI 241 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~----------~~P~~~~~~~~~~~v~~g~~~~l~c~~~ 241 (616)
..|.|.+++++|.|.|+|.|.|..+...... ..+.+.... ..|.+....+....+.+|+++.|.|.+.
T Consensus 82 ~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~--~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~ 159 (276)
T 3auv_A 82 FTLTISSLQPEDFATYYCQQHYTTPPTFGCG--TKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAAS 159 (276)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCCCCCC--EEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEE
T ss_pred EEEEEccCChhhCEEEEEEEecCCcccccCC--EEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEec
Confidence 3799999999999999999998755322111 123332221 1233333334567899999999999999
Q ss_pred eec--CceeEEEECC--eee-----------------cccCcEEEEec--CCceEEEecCCCCCCcEEEEEEEEcCC---
Q psy12426 242 GEP--IPTKEWLCND--ITI-----------------ISKDRFKIVND--DKSTKLKVFDSKRGDSGIYTLAVKNSW--- 295 (616)
Q Consensus 242 ~~p--~~~~~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~~l~~~~~g~y~c~a~n~~--- 295 (616)
+.+ .+.+.|++++ ..+ ....++.+... .....|.|.+++..|+|.|.|.|.|..
T Consensus 160 g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~ 239 (276)
T 3auv_A 160 GFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPY 239 (276)
T ss_dssp SSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTC
T ss_pred CccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCc
Confidence 876 5899999963 111 01245555543 345689999999999999999999973
Q ss_pred CC--ceeeEEEEEecCC
Q psy12426 296 GT--DKGTAKVTVLDIP 310 (616)
Q Consensus 296 g~--~~~~~~l~v~~~p 310 (616)
+. ......|.|...+
T Consensus 240 ~~~~fg~gt~l~V~~~~ 256 (276)
T 3auv_A 240 AMDYWGQGTLVTVSSAS 256 (276)
T ss_dssp SCCCBCCCEEEEEC---
T ss_pred CceEECCCEEEEEcccc
Confidence 21 1234556665433
No 213
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=1.5e-14 Score=116.09 Aligned_cols=107 Identities=21% Similarity=0.291 Sum_probs=87.2
Q ss_pred cCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEeecCCccEEEcCCCCC
Q psy12426 398 QSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACIVPANITATSVPDLKE 475 (616)
Q Consensus 398 s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~~~~~~~~~~l~~L~p 475 (616)
+..+.+.+....|.+|.++.+..++.+++.|.|.+|. +++.+|.+|.|+|+..+. .|...... ....+++.+|.|
T Consensus 6 S~~~~~~t~~~~P~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~v~~L~p 82 (118)
T 1x3d_A 6 SGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPS-DNGSKIQNFVLEWDEGKGNGEFCQCYMG--SQKQFKITKLSP 82 (118)
T ss_dssp CCCCCCCCCCSCCCCCCCCEEEEEETTEEEEECCCCC-CCSSCEEEEEEEECTTTSSSCCEEEEEE--SCSEEEEESCCT
T ss_pred CcCEEEEcCCCCCcCCCCcEEeccCCCEEEEEECCCC-CCCCcceEEEEEEecCCCCCCeEEeecc--CCcEEEeCCCCC
Confidence 4556666777889999999999999999999999876 456689999999987754 67665433 457899999999
Q ss_pred CCeEEEEEEEEcCCCCCCCCCCCCCEEeccCc
Q psy12426 476 GEEYEFRVIAVNKGGPGEPSKASAPVTCKPRF 507 (616)
Q Consensus 476 ~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~ 507 (616)
++.|.|||+|.|..|.|++|......|....+
T Consensus 83 ~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P 114 (118)
T 1x3d_A 83 AMGCKFRLSARNDYGTSGFSEEVLYYTSGCSG 114 (118)
T ss_dssp TCEEEEECCEEESSCBCCCCCCEEEECSCCCC
T ss_pred CCEEEEEEEEEECCCCCCCccCEEEEcCCCCC
Confidence 99999999999999999999876655444333
No 214
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.58 E-value=5.2e-14 Score=130.60 Aligned_cols=125 Identities=11% Similarity=0.103 Sum_probs=83.7
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCC-CCCCCEEecc-----------------ccCCCceeccCCcceEEEcCC
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS-DPTAPHIARA-----------------KKVSPYINRDQLSDIKVRAGS 232 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s-~~~~~~~~~~-----------------~~~~P~~~~~~~~~~~v~~g~ 232 (616)
...|.|.+++++|.|.|.|.|.|..+..... .....+.+.. ...+|.+ ...+....+.+|+
T Consensus 75 ~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~p~~~~v~~G~ 153 (256)
T 3tf7_C 75 SFHLRKASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAV-TQSPRNKVTVTGE 153 (256)
T ss_dssp EEEEEESSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCE-EESCSEEEEETTC
T ss_pred EEEEEECCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEE-EecCCEEEEeCCC
Confidence 3479999999999999999999876521110 0111233332 1234444 4456677888999
Q ss_pred eEEEEEEEeeecCceeEEEECC--eee---c------------ccCcEEEEe-cCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 233 NFEFDINVIGEPIPTKEWLCND--ITI---I------------SKDRFKIVN-DDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 233 ~~~l~c~~~~~p~~~~~W~~~~--~~~---~------------~~~~~~~~~-~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
.++|.|.+.+. .+.+.|++.. ..+ . ...++.+.. ......|.|.+++.+|+|.|+|.|.|.
T Consensus 154 ~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 232 (256)
T 3tf7_C 154 NVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDA 232 (256)
T ss_dssp CEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEE
T ss_pred cEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCC
Confidence 99999999887 7799999832 111 0 012333332 234568999999999999999999997
Q ss_pred CCC
Q psy12426 295 WGT 297 (616)
Q Consensus 295 ~g~ 297 (616)
.|.
T Consensus 233 ~g~ 235 (256)
T 3tf7_C 233 PGQ 235 (256)
T ss_dssp TTE
T ss_pred CCc
Confidence 664
No 215
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.58 E-value=2e-14 Score=136.46 Aligned_cols=214 Identities=12% Similarity=0.035 Sum_probs=135.7
Q ss_pred EEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEe----cCCCCCCCCccceeecCCeEEEEEeCCCCCC-----CCceEE
Q psy12426 274 LKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL----DIPSPPEGPLKPSNITKSSCNLEWRAPRDDG-----GTDILH 344 (616)
Q Consensus 274 l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~----~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~-----~~~i~~ 344 (616)
|....+.+...|.+++.|.| .|.+..+....+. ..+.+|. +.+.. ..+++.|.|.++...+ ...+..
T Consensus 63 lt~~~l~~~~~Y~~rV~A~n-~~~S~~s~~~~f~~~~~~~~~pP~--v~~~~-~~~si~v~w~P~~~~~~~~~~~g~~l~ 138 (306)
T 3s98_A 63 FSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPE--VHLEA-EDKAIVIHISPGTKDSVMWALDGLSFT 138 (306)
T ss_dssp CCC---CTTSCEEEEEEEEC-SSCEEEEECCCBCHHHHCBCCCCE--EEEEE-CSSCEEEEEECC---CCCC-----CCE
T ss_pred ccccccCCCCcEEEEEEEEe-CCcCCCEeeeeEechhhCccCCCe--EEEEE-cCCEEEEEEECCCCCCcceeccCCcEE
Confidence 33345678889999999999 6654433222221 2344443 55443 4468999999654321 246899
Q ss_pred EEEEEEeCCCCC-EEEccccccceEEeccccCCCeEEEEEEEEe--cCcCCCCccccCCEEccCCCCC-CCCCCCCEEEE
Q psy12426 345 YVVEKMDMETGR-WVPMGDVSGTYTRAENLIEGHDYNFRVKAVN--KIGESLPLVCQSPITAKDPFGR-PDRPGQPTVTD 420 (616)
Q Consensus 345 y~v~~~~~~~~~-~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n--~~g~~~~~~~s~~~~~~~~~~~-p~~p~~~~~~~ 420 (616)
|.|.|++.+... |... .....+.|.+|.+++.|.|+|+|.| ..|.|..+ ..+.+.+.... +.+|.++.+..
T Consensus 139 Y~v~y~~~~~~~~~~~~--~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S---~~~~~~T~~~~p~~~P~~v~~~~ 213 (306)
T 3s98_A 139 YSLVIWKNSSGVEERIE--NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYS---PVHCIKTTVENELPPPENIEVSV 213 (306)
T ss_dssp EEEEEEETTTCCCEEEE--EECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCC---CCEEEECCSCCSSCCCEEEEEEE
T ss_pred EEEEEEECCCCCeEEEe--cccceEEEccCCCCCeEEEEEEEEEccCCCCCCCC---CcEeeEecCCCcCCCCceEEEEE
Confidence 999988754433 4422 3356899999999999999999999 56777664 44555444444 35677888765
Q ss_pred ecCCeEEEEecCCCCCCCCcceeEEEEEee--------CCC-CceEeE-eecCCccEEEcCC-CCCCCeEEEEEEEEcCC
Q psy12426 421 WGKDHVDLEWTPPKKDGGSPISQYIIEKKP--------KYG-PWEKAC-IVPANITATSVPD-LKEGEEYEFRVIAVNKG 489 (616)
Q Consensus 421 ~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~--------~~~-~~~~~~-~~~~~~~~~~l~~-L~p~t~Y~~~v~a~n~~ 489 (616)
. .+++.|+|.+|.. + ..|.++|.. .++ .|.... -.....+.+.+.+ |.++..|.|||+|.|..
T Consensus 214 ~-~~s~~l~W~~p~~-~----~~~~v~~~~gy~~~~~~~~~~~W~~~~~c~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~ 287 (306)
T 3s98_A 214 Q-NQNYVLKWDYTYA-N----MTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGN 287 (306)
T ss_dssp E-TTEEEEEEECSSS-S----CEEEEEEEEGGGGSCC----CCCEECGGGTTBSSSEEEEEGGGSCSSEEEEEEEEECSS
T ss_pred e-cCEEEEEeCCCCC-c----EEEEEEEehhhhhccccccccCceECCCceeCCCccccCchhhcccCCEEEEEEEccCC
Confidence 5 5789999997642 2 246555542 223 787431 1123456777777 34555999999999999
Q ss_pred CCCCCCCCCCCEE
Q psy12426 490 GPGEPSKASAPVT 502 (616)
Q Consensus 490 G~g~~s~~~~~~~ 502 (616)
|.|.+|....+.+
T Consensus 288 ~~s~~s~~~~~~~ 300 (306)
T 3s98_A 288 NTSFWSEEIKFDT 300 (306)
T ss_dssp CBCCCCCCEEEEC
T ss_pred CccccccccccCc
Confidence 9999987655433
No 216
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=3.7e-15 Score=122.12 Aligned_cols=116 Identities=22% Similarity=0.312 Sum_probs=92.5
Q ss_pred EEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCC--ceEeEe
Q psy12426 383 VKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGP--WEKACI 460 (616)
Q Consensus 383 v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~--~~~~~~ 460 (616)
|.|.|..|.+..+.. .+.+.+....|++|.++++...+.+++.|+|.+|...++ .|.+|.|+|+..+.. ......
T Consensus 3 V~A~n~~G~g~~S~~--~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~ 79 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHP--PILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNG-IILAYQITHRLNTTTANTATVEV 79 (130)
T ss_dssp CCCCCCCCCCCCCCC--CSCCCCSCCCCCCCCCCEEEEECSSEEEEECCCCSCCCS-CCCEEEEEEEESSCCCSCCCEEE
T ss_pred eEEEecccCCCCCCC--cEEEEcCCCCCCCCCceEEEecCCCEEEEEEcCCCCCCC-ceEEEEEEEEECCCCCceEEEEE
Confidence 567899999877532 355566678899999999999999999999998865444 599999999987652 111235
Q ss_pred ecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCE
Q psy12426 461 VPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPV 501 (616)
Q Consensus 461 ~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~ 501 (616)
.......++|.+|.|++.|.|+|+|.|..|.|++|....+.
T Consensus 80 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~ 120 (130)
T 1wfo_A 80 LAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVT 120 (130)
T ss_dssp ECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEEC
T ss_pred eCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEe
Confidence 56778899999999999999999999999999988754433
No 217
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=114.79 Aligned_cols=99 Identities=25% Similarity=0.335 Sum_probs=85.9
Q ss_pred CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEE
Q psy12426 407 FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIA 485 (616)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a 485 (616)
..+|++|.++++..++.+++.|.|.+|..+++.+|.+|.|+|+..+. .|............+++.+|.|++.|.|||+|
T Consensus 5 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A 84 (110)
T 2yuw_A 5 SSGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKA 84 (110)
T ss_dssp CCCSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEE
T ss_pred CCCCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEeccccCccCEEEECCCCCCCEEEEEEEE
Confidence 36788898999999999999999998887777789999999998776 78766544456889999999999999999999
Q ss_pred EcCCCCCCCCCCCCCEEecc
Q psy12426 486 VNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 486 ~n~~G~g~~s~~~~~~~~~~ 505 (616)
+|..|.|++|..+..+++.+
T Consensus 85 ~n~~G~s~~S~~~~~v~~~~ 104 (110)
T 2yuw_A 85 VNAAGASEPKYYSQPILVKE 104 (110)
T ss_dssp EETTEECCCEECSSCEECCC
T ss_pred EcCCcCCCCcCCCCCEEecC
Confidence 99999999998887777654
No 218
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.58 E-value=4.6e-14 Score=140.96 Aligned_cols=129 Identities=17% Similarity=0.137 Sum_probs=93.9
Q ss_pred EEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEe----cCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEE
Q psy12426 273 KLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL----DIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVE 348 (616)
Q Consensus 273 ~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~----~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~ 348 (616)
.+.+..+.....|.|+|.|.|..|.... .+.+. .+|.+|.+ +.+.....+.+.|+|.+|... +..+..|.|+
T Consensus 348 ~ct~~l~~~~t~Y~f~V~A~N~~G~~~S--~~~~~~~~~v~P~PP~n-l~v~~~s~~sl~LsW~pP~~~-~g~~l~YeV~ 423 (488)
T 2q7n_A 348 RLGVQMHPGQEIHNFTLTGRNPLGQAQS--AVVINVTERVAPHDPTS-LKVKDINSTVVTFSWYLPGNF-TKINLLCQIE 423 (488)
T ss_dssp EEEEECCSSCCCCEEEEEEEETTEEEEE--EEECCGGGTBCCCCCEE-EEEEECSTTCEEEEEEEEEEC-SSSEEEEEEE
T ss_pred EEEEcCCCCccEEEEEEEEEeCCCCccc--eEEEEecCCCCCCCCeE-EEEEecCCCEEEEEEeCCCCC-CCcceEEEEE
Confidence 4555444335889999999999988443 33332 35677765 666667788999999988654 3478999999
Q ss_pred EEeCCCCCEEE-cccc--ccceE--EeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCC
Q psy12426 349 KMDMETGRWVP-MGDV--SGTYT--RAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDP 406 (616)
Q Consensus 349 ~~~~~~~~~~~-~~~~--~~~~~--~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~ 406 (616)
|+..+...|.. .... ....+ .+.+|.+++.|.|+|+|.+ .|.|.++.+|..+.+.+.
T Consensus 424 Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~ 485 (488)
T 2q7n_A 424 ICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTT 485 (488)
T ss_dssp EBCTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCC
T ss_pred EEECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEECC
Confidence 99876666742 2111 13345 8999999999999999999 888877777877776654
No 219
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.58 E-value=1.3e-14 Score=131.68 Aligned_cols=132 Identities=11% Similarity=0.089 Sum_probs=83.8
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEW 250 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W 250 (616)
...|.|.+++.+|.|.|+|.|.| .|... . ...+.+......|.. .....+..|+.+.|.|.+.|.|.+.+.|
T Consensus 79 ~~~L~I~~v~~~D~G~Y~C~~~~-~~~~~-~--~~~l~V~~~~~~~~~----~~~~~~~~g~~v~L~C~~~g~P~p~i~W 150 (222)
T 3sbw_C 79 NAALQITDVKLQDAGVYRCMISY-GGADY-K--RITVKVNAPYNKINQ----RILVVDPVTSEHELTCQAEGYPKAEVIW 150 (222)
T ss_dssp EEEEEESSCCGGGCEEEEEEEES-SSEEE-E--EEEEEEEBCCCCCEE----EEEEEETTTTEEEEEEEEEEBSCCEEEE
T ss_pred EEEEEEcCcccccCeEEEEEEEe-CCCce-e--EEEEEEECCCCCCCc----eeeeeecCCCcEEEEEEecCCCCCeEEE
Confidence 34788899999999999999887 33211 1 112222222222221 1112567899999999999999999999
Q ss_pred EEC-CeeecccCcEEEEe--cCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy12426 251 LCN-DITIISKDRFKIVN--DDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIP 310 (616)
Q Consensus 251 ~~~-~~~~~~~~~~~~~~--~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p 310 (616)
+++ +..+.......... .+......+..+...|.|.|+|.|.|..|.....+.+.+...|
T Consensus 151 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 151 TSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELP 213 (222)
T ss_dssp EETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC-
T ss_pred EECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCc
Confidence 998 55544322221111 1111122222445678999999999999999888888887654
No 220
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.58 E-value=1.4e-14 Score=133.26 Aligned_cols=120 Identities=11% Similarity=0.072 Sum_probs=81.5
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccC--CCceeccCCcceEEEcCCeEEEEEEEeeecC--ce
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKV--SPYINRDQLSDIKVRAGSNFEFDINVIGEPI--PT 247 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~--~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~--~~ 247 (616)
..|.|.++++.|.|.|+|.|.|..+...... ..+.+..... +|.+....+....+.+|+.+.|.|.+.+.|. +.
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~ 152 (240)
T 1moe_A 75 FTLIIDPVEADDVATYYCQQTNEDPYTFGGG--TKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTY 152 (240)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCCBCCC--EEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSC
T ss_pred EEEEEcCCChhhCEEEEEEEccCCceeecCC--EEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCE
Confidence 3688999999999999999988755311111 1233322211 2333233456678999999999999998874 59
Q ss_pred eEEEEC--Ceeec-----------------ccCcEEEEec--CCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 248 KEWLCN--DITII-----------------SKDRFKIVND--DKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 248 ~~W~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
+.|+++ +..+. ...++.+... .....|.|.+++.+|+|.|.|.|.+
T Consensus 153 v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 153 MHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 999995 22110 1235555432 4457899999999999999999985
No 221
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.58 E-value=5.2e-14 Score=113.43 Aligned_cols=102 Identities=30% Similarity=0.578 Sum_probs=86.8
Q ss_pred ccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCC--CCceEeEe-ecCCccEEEcCCCCCCCeE
Q psy12426 403 AKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKY--GPWEKACI-VPANITATSVPDLKEGEEY 479 (616)
Q Consensus 403 ~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~--~~~~~~~~-~~~~~~~~~l~~L~p~t~Y 479 (616)
......+|.+|.++.+..++.+++.|.|.+ ..+++.+|.+|.|+|+..+ ..|..... .......++|.+|.|++.|
T Consensus 11 ~~~~~~~P~~P~~~~~~~~~~~sv~l~W~p-~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y 89 (121)
T 1x4z_A 11 DHGRLSPPEAPDRPTISTASETSVYVTWIP-RGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISY 89 (121)
T ss_dssp CSSSCCCCCCCCCCEEEECCSSEEEEECCC-CCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEE
T ss_pred ccCcCCCCccCCCCEEEEccCCEEEEEEEC-CCCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEE
Confidence 334557899999999999999999999994 5567778999999999876 37876643 3667889999999999999
Q ss_pred EEEEEEEcCCCCCCCCCCCCCEEecc
Q psy12426 480 EFRVIAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 480 ~~~v~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
.|||+|+|..|.|++|..+..+++..
T Consensus 90 ~frV~A~n~~G~s~~S~~~~~v~~~~ 115 (121)
T 1x4z_A 90 KFRVRALNMLGESEPSAPSRPYVVSG 115 (121)
T ss_dssp EEEEEEEETTEECCCCCCCCCEECCS
T ss_pred EEEEEEEcCCCcCCCcCCCCCEEcCC
Confidence 99999999999999999988777654
No 222
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=8.8e-15 Score=115.69 Aligned_cols=103 Identities=29% Similarity=0.372 Sum_probs=84.3
Q ss_pred CCCCCCCCCCCEE-EEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEE
Q psy12426 406 PFGRPDRPGQPTV-TDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRV 483 (616)
Q Consensus 406 ~~~~p~~p~~~~~-~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v 483 (616)
...+|++|.++.+ ..+..+++.|+|.+|..+++.+|.+|.|+|+..+. .|..... +....++|.+|.|++.|.|||
T Consensus 5 ~~~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~v~~L~p~t~Y~frV 82 (110)
T 2crz_A 5 SSGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ--GSEVECTVSSLLPGKTYSFRL 82 (110)
T ss_dssp CCCCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEE--ESCSEEEEESCCTTCEEEECC
T ss_pred cCCCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEe--CCcEEEEECCcCCCCEEEEEE
Confidence 3468899999998 56788999999998877778889999999997665 7876643 457899999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCEEeccCcCCC
Q psy12426 484 IAVNKGGPGEPSKASAPVTCKPRFVAP 510 (616)
Q Consensus 484 ~a~n~~G~g~~s~~~~~~~~~~~~~~p 510 (616)
+|+|..|.|++|......+...++.+|
T Consensus 83 ~A~n~~G~g~~S~~~~~~T~~~~P~~P 109 (110)
T 2crz_A 83 RAANKMGFGPFSEKCDITTAPGSGPSS 109 (110)
T ss_dssp EEECSSCBCCCCCCEEEECCCSCCCCC
T ss_pred EEEcCCccCCCCCccccccCCCCCCCC
Confidence 999999999999877665554444443
No 223
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.57 E-value=1.3e-14 Score=113.40 Aligned_cols=96 Identities=25% Similarity=0.403 Sum_probs=85.4
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.| ...+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+..+.++.+...+....|.|.++...|.|.|+|.|.|
T Consensus 12 ~pP~f-~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 12 SPPCF-LRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEE-EECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEE-EeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 45777 45567899999999999999999999999999999999888888888778888999999999999999999999
Q ss_pred CCCCceeeEEEEEecCC
Q psy12426 294 SWGTDKGTAKVTVLDIP 310 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~p 310 (616)
..|....++.|.|..+|
T Consensus 91 ~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCEEEEEEEEEEEcCC
Confidence 99999889999988765
No 224
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.57 E-value=4.6e-14 Score=129.90 Aligned_cols=133 Identities=12% Similarity=0.047 Sum_probs=84.8
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCC---CCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGP---GEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKE 249 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~---~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~ 249 (616)
.|.|.+++..|.|.|+|.|.+..+. +..+. ...+.+......|.+.... . ..+.+|++++|.|.+.+.+ +.+.
T Consensus 63 ~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~-~~~L~V~~~~~~P~l~~~p-~-~~V~~G~~vtL~C~~~~~~-~~~~ 138 (257)
T 1b6u_A 63 NFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSD-PLDIVITGLYEKPSLSAQP-G-PTVLAGESVTLSCSSRSSY-DMYH 138 (257)
T ss_dssp EEEECSCCTTTCEEEEEEEECSSCTTSCCCCCC-CEEEEEECSSCCCEEECSS-C-TTCBTTCEEEEEEECSSCC-SEEE
T ss_pred EEEeecCCcccCEEEEEeEeccCCCccccccCC-CEEEecccCCCCcceEccC-C-CccCCCCEEEEEEeCCCCC-cEEE
Confidence 6778888888888888888765332 12221 1223443334456654332 2 3578999999999988764 6899
Q ss_pred EEECCeeecccCcEEEE-ecCCceEEEecCCCCCCcEEEEEEEEcCCC-----CceeeEEEEEecCCC
Q psy12426 250 WLCNDITIISKDRFKIV-NDDKSTKLKVFDSKRGDSGIYTLAVKNSWG-----TDKGTAKVTVLDIPS 311 (616)
Q Consensus 250 W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g-----~~~~~~~l~v~~~p~ 311 (616)
|+|++..+......... .......|.|.+++ |.|.|+|.|.+..+ ..+....|.|...|.
T Consensus 139 w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 139 LSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp EEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred EEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 99999876433221111 11235689999998 99999999997532 223445566665543
No 225
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.56 E-value=2.2e-14 Score=134.44 Aligned_cols=130 Identities=14% Similarity=0.172 Sum_probs=90.6
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE---eeecCc
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV---IGEPIP 246 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~---~~~p~~ 246 (616)
....|.|.+++.+|.|.|+|.|.|..+....+ ..+.+..... .+....+..|+.+.|.|.+ .+.|.+
T Consensus 82 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~---~~~~l~V~~~-------~p~~~~v~~G~~v~L~C~~~~~~~~p~~ 151 (268)
T 3mj6_A 82 NDGSLLLQDVQKADEGIYTCEIRLKNESMVMK---KPVELWVLPE-------EPRDLRVRVGDTTQMRCSIQSTEEKRVT 151 (268)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTCCCEEE---EEEEEEEECC-------CCSEEEEETTCCEEECCBCEESSSSCCC
T ss_pred CEEEEEECCCCHhHCEEEEEEEEecCCcceEE---EEEEEEEecc-------CCCccccccCCcEEEEEEecCCCCCCcc
Confidence 34589999999999999999999875543211 1122222112 2346788999999999999 566889
Q ss_pred eeEEEECCeee-ccc---------------------CcEEEEe--cCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeE
Q psy12426 247 TKEWLCNDITI-ISK---------------------DRFKIVN--DDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 302 (616)
Q Consensus 247 ~~~W~~~~~~~-~~~---------------------~~~~~~~--~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~ 302 (616)
.+.|++++... ... .+..+.. ......|.|.++...|.|.|+|.|.|..|.....+
T Consensus 152 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 231 (268)
T 3mj6_A 152 KVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTI 231 (268)
T ss_dssp EEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEE
Confidence 99999943211 100 1111111 12345899999999999999999999888888888
Q ss_pred EEEEecC
Q psy12426 303 KVTVLDI 309 (616)
Q Consensus 303 ~l~v~~~ 309 (616)
.|.+...
T Consensus 232 ~l~V~~~ 238 (268)
T 3mj6_A 232 VLHVVQD 238 (268)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 8888543
No 226
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.56 E-value=2.2e-14 Score=138.80 Aligned_cols=231 Identities=10% Similarity=0.041 Sum_probs=146.1
Q ss_pred cccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeE-EEEEEEEeCCCCCCCCCCCCCEEeccccCC
Q psy12426 137 LLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQY-EFRVLAVNKGGPGEPSDPTAPHIARAKKVS 215 (616)
Q Consensus 137 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~-~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~ 215 (616)
|.+.+.|++ ++..+. ..... .....|.|.+++..|.| .|+|.|.|..|..... ........+
T Consensus 66 p~~~v~W~k--~~~~~~---~~~~~-------~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~-----~~~~v~~~~ 128 (329)
T 3oq3_B 66 KDNVVNWEK--IGKTRR---PLNRR-------VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQG-----IVRSHIRKP 128 (329)
T ss_dssp TTCEEEEEE--CSSSCE---ECSTT-------EETTEEEESSCCGGGGGCCEEEEEECTTSCEEEE-----EEEEEECCC
T ss_pred CCCeeEEEE--CCCCcc---ccCce-------eecceEEEcCCChHhCCCcEEEEEEeCCCceeeE-----EEEEEEcCC
Confidence 446799999 533222 11111 22458999999999999 9999999988752211 111112233
Q ss_pred CceeccCCcceEEEcCCeEEEEEEEeeec-CceeEEEECCeeecc-cCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 216 PYINRDQLSDIKVRAGSNFEFDINVIGEP-IPTKEWLCNDITIIS-KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 216 P~~~~~~~~~~~v~~g~~~~l~c~~~~~p-~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
|.+. .......+.+|+.+.|.|.+.+.| .+.+.|++++..+.. ..++... . ..|.|.++...|.|.|+|.|.|
T Consensus 129 p~~~-~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-~---~~L~I~~v~~~D~G~Y~C~a~n 203 (329)
T 3oq3_B 129 PSCI-PETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-G---QNLIIHNPELEDSGRYDCYVHY 203 (329)
T ss_dssp CSCE-EEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-T---TEEEECSCCGGGCEEEEEEEEE
T ss_pred CcEe-ccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-C---CEEEEeecChhhCEEEEEEEEe
Confidence 4432 212223356799999999999999 899999999998753 3444444 2 4899999999999999999998
Q ss_pred C--CCCceee----EEEEEecCCCCCC---CCccceeecCCeEEEEEeCCCCCC-CCceEEEEEEEEeCCCC------CE
Q psy12426 294 S--WGTDKGT----AKVTVLDIPSPPE---GPLKPSNITKSSCNLEWRAPRDDG-GTDILHYVVEKMDMETG------RW 357 (616)
Q Consensus 294 ~--~g~~~~~----~~l~v~~~p~~p~---~~~~~~~~~~~~~~l~W~~~~~~~-~~~i~~y~v~~~~~~~~------~~ 357 (616)
. .|..... +.+.+..+|.... .+-......+..+.|.|....... ..++ .+.|...+.. ..
T Consensus 204 ~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i---~v~W~~~g~~i~~~~~~~ 280 (329)
T 3oq3_B 204 DDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDV---LIDWENPSGWIIGLDFGV 280 (329)
T ss_dssp CCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCC---EEEEECTTSCBCCBCSSE
T ss_pred cccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCc---EEEEEECCeeeeccCCce
Confidence 7 6654433 6677766653211 112234456778888888643321 0121 2333322111 00
Q ss_pred EEc----cccccceEEeccccCCCeE-EEEEEEEecCcCC
Q psy12426 358 VPM----GDVSGTYTRAENLIEGHDY-NFRVKAVNKIGES 392 (616)
Q Consensus 358 ~~~----~~~~~~~~~i~~L~~~~~y-~~~v~a~n~~g~~ 392 (616)
... .......+.|.++...+.+ .|+|.|.|..|..
T Consensus 281 ~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~ 320 (329)
T 3oq3_B 281 YSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDK 320 (329)
T ss_dssp EEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEE
T ss_pred eeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCce
Confidence 000 0013456889999998889 9999999998864
No 227
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.56 E-value=4.5e-14 Score=130.69 Aligned_cols=71 Identities=14% Similarity=0.156 Sum_probs=54.4
Q ss_pred CcceEEEcCCeEEEEEEEeeec--CceeEEEEC--Ceeec-----------------ccCcEEEEec--CCceEEEecCC
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEP--IPTKEWLCN--DITII-----------------SKDRFKIVND--DKSTKLKVFDS 279 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p--~~~~~W~~~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~l 279 (616)
+....+.+|+.+.|.|.+.+.+ .+.+.|+++ +..+. ...++.+... ....+|.|.++
T Consensus 138 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 217 (250)
T 3esu_F 138 SGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSL 217 (250)
T ss_dssp CCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCC
Confidence 4557789999999999998876 789999997 33221 1145555432 44568999999
Q ss_pred CCCCcEEEEEEEEc
Q psy12426 280 KRGDSGIYTLAVKN 293 (616)
Q Consensus 280 ~~~~~g~y~c~a~n 293 (616)
+.+|+|.|.|.+.+
T Consensus 218 ~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 218 TSVDSAVYFCARSG 231 (250)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred CcccCEEEEEEEec
Confidence 99999999999997
No 228
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.56 E-value=7.2e-15 Score=141.39 Aligned_cols=210 Identities=12% Similarity=0.044 Sum_probs=131.9
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceec--cCCcceEEEcCCeEEEEEEE------eee
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINR--DQLSDIKVRAGSNFEFDINV------IGE 243 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~--~~~~~~~v~~g~~~~l~c~~------~~~ 243 (616)
..|.|.+++..|.|.|+|.|.|..|..... +.+.....+|.+.. .......+..|+.+.|.|.+ .+.
T Consensus 62 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~-----~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~ 136 (315)
T 1itb_B 62 EKLWFVPAKVEDSGHYYCVVRNSSYCLRIK-----ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENN 136 (315)
T ss_dssp SBEECTTCCGGGCSCCEECCCSSSCCCCEE-----CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTT
T ss_pred CeEEECCCChhhCEEEEEEEeCCceEEEEE-----EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCC
Confidence 489999999999999999999887653321 11112233444321 11234578899999999998 889
Q ss_pred cCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEE-cCCCCc---eeeEEEEEecC--CCCCC---
Q psy12426 244 PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK-NSWGTD---KGTAKVTVLDI--PSPPE--- 314 (616)
Q Consensus 244 p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~-n~~g~~---~~~~~l~v~~~--p~~p~--- 314 (616)
|.+.+.|++++..+...........+ .|.|.++...|.|.|+|.|. |..|.. .....+.+... +.+|.
T Consensus 137 p~~~i~W~k~~~~l~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~ 213 (315)
T 1itb_B 137 ELPKLQWYKDCKPLLLDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 213 (315)
T ss_dssp CCCCCEEEETTEECCCCSSSEEEETT---EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECS
T ss_pred CCCEEEEEECCEECCCccceEeecCc---eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEec
Confidence 99999999999988643322222222 89999999999999999999 777765 23333333321 12221
Q ss_pred CCc-cceeecCCeEEEEEeCCCCCCCCceEEEEEEEE--eCCC-C-----CEEEccc-------cccceEEeccccCCC-
Q psy12426 315 GPL-KPSNITKSSCNLEWRAPRDDGGTDILHYVVEKM--DMET-G-----RWVPMGD-------VSGTYTRAENLIEGH- 377 (616)
Q Consensus 315 ~~~-~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~--~~~~-~-----~~~~~~~-------~~~~~~~i~~L~~~~- 377 (616)
.+- .+....+..+.|.|...... .+ .+.+.+. .... . ....... .....+.|.++...+
T Consensus 214 ~~~~~~~~~~g~~v~l~C~~~g~P--~p--~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 289 (315)
T 1itb_B 214 PANETMEVDLGSQIQLICNVTGQL--SD--IAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFY 289 (315)
T ss_dssp CCSEEEECCSSSCEEEEEEEEECT--TS--EEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGG
T ss_pred CCCCcEEEeCCCcEEEEEEEecCC--CC--eeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHc
Confidence 111 12344677889999864322 11 1222211 0000 0 0111110 112378899999988
Q ss_pred eEEEEEEEEecCcCCC
Q psy12426 378 DYNFRVKAVNKIGESL 393 (616)
Q Consensus 378 ~y~~~v~a~n~~g~~~ 393 (616)
.+.|+|.|.|..|...
T Consensus 290 ~G~Y~C~a~N~~G~~~ 305 (315)
T 1itb_B 290 KHPFTCFAKNTHGIDA 305 (315)
T ss_dssp TSCEEEEEECTTCCEE
T ss_pred CCceEEEEecCCCcee
Confidence 8999999999999754
No 229
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2.5e-14 Score=117.93 Aligned_cols=103 Identities=21% Similarity=0.320 Sum_probs=81.3
Q ss_pred cCCEEccCCCCCCC-CCCCCEEEEecCCeEEEEecCCC-CCCCCcceeEEEEEeeCCC-C--ceEeEeecCCccEEEcCC
Q psy12426 398 QSPITAKDPFGRPD-RPGQPTVTDWGKDHVDLEWTPPK-KDGGSPISQYIIEKKPKYG-P--WEKACIVPANITATSVPD 472 (616)
Q Consensus 398 s~~~~~~~~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~-~~~~~~i~~Y~i~~~~~~~-~--~~~~~~~~~~~~~~~l~~ 472 (616)
+..+.+.+....|. +|.++++...+.+++.|+|.+|. ...++.|.+|.|+|+..+. . +............++|.+
T Consensus 6 S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 85 (134)
T 2edx_A 6 SGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVG 85 (134)
T ss_dssp CCCCCCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSEEEEES
T ss_pred cCCEEEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccEEEeCC
Confidence 45566667777777 77799999889999999999873 2344469999999988765 2 233333356788999999
Q ss_pred CCCCCeEEEEEEEEcCCCCCCCCCCCCC
Q psy12426 473 LKEGEEYEFRVIAVNKGGPGEPSKASAP 500 (616)
Q Consensus 473 L~p~t~Y~~~v~a~n~~G~g~~s~~~~~ 500 (616)
|.|++.|.|+|+|.|..|.|++|.....
T Consensus 86 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~ 113 (134)
T 2edx_A 86 LEKWTEYRVWVRAHTDVGPGPESSPVLV 113 (134)
T ss_dssp CCTTCEEEEEEEEEETTBCCCCCCCEEE
T ss_pred CCCCCEEEEEEEEEcCCCcCCCCCCEEe
Confidence 9999999999999999999998875443
No 230
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.55 E-value=1.3e-14 Score=132.52 Aligned_cols=118 Identities=16% Similarity=0.147 Sum_probs=79.4
Q ss_pred eEEeecccCCCeEEEEEEEEeCC-CCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeE-EEEEEE-eeecCceeE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKG-GPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNF-EFDINV-IGEPIPTKE 249 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~-g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~-~l~c~~-~~~p~~~~~ 249 (616)
.|.|.+++.+|.|.|+|.|.+.. |... ....+.+...+..|.+. ..+....+..|+.+ .|.|.+ .+.|.+.+.
T Consensus 78 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~---~~~~l~V~~~p~~~~~~-~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~ 153 (231)
T 2pet_A 78 RLVLAEAQVGDERDYVCVVRAGAAGTAE---ATARLNVFAKPEATEVS-PNKGTLSVMEDSAQEIATCNSRNGNPAPKIT 153 (231)
T ss_dssp CEEESSCCGGGCEEEEEEEECGGGCEEE---EEEEEEEEBCCCCCEEE-ECCSSCCTTCCSEEEEEEEEEEEEBSCCEEE
T ss_pred eEEEcccCcccCceEEEEEEecCCCceE---EEEEEEEEecCCCcEEe-cCCcceeecCCCceEEEEEEeECcccCCEEE
Confidence 38888888889999999988875 3221 11223333333345542 23344556688887 999999 899999999
Q ss_pred EEECCeeecccC----cEEEEec----CC-----ceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 250 WLCNDITIISKD----RFKIVND----DK-----STKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 250 W~~~~~~~~~~~----~~~~~~~----~~-----~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
|++++..+.... ++.+... .. ...|.|......|.|.|+|.|.|.
T Consensus 154 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 154 WYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred EEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 999999876554 4443321 11 146777755555699999999994
No 231
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.55 E-value=5e-14 Score=125.55 Aligned_cols=128 Identities=11% Similarity=0.063 Sum_probs=84.4
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCC--CCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEe-eecCce
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS--DPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVI-GEPIPT 247 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s--~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~-~~p~~~ 247 (616)
...|.|.+++..|.|.|+|.|.|..|..... .....+.+......|.+.. .....|+.+.|.|.+. +.|.|.
T Consensus 64 ~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~-----~~~~~g~~~~l~C~~~~g~P~p~ 138 (201)
T 1dr9_A 64 NLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISD-----FEIPTSNIRRIICSTSGGFPEPH 138 (201)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEE-----EECSSTTEEEEEEEEEEESSCEE
T ss_pred CcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEe-----ccCCCCCeEEEEEecCCccCCCE
Confidence 3489999999999999999999987653310 1122233333333344321 1124588899999995 999999
Q ss_pred eEEEECCeeecccCcEEEEecC-Cc-eEEEecCCCCCCcEEEEEEEEcCCCCceeeEE
Q psy12426 248 KEWLCNDITIISKDRFKIVNDD-KS-TKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAK 303 (616)
Q Consensus 248 ~~W~~~~~~~~~~~~~~~~~~~-~~-~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~ 303 (616)
+.|++++..+............ .. ....+..+...|.|.|+|.|.|..|.....+.
T Consensus 139 i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 139 LSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp EEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred EEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 9999999887644322222211 22 22233455668999999999998887765544
No 232
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.55 E-value=2.7e-14 Score=111.82 Aligned_cols=94 Identities=23% Similarity=0.280 Sum_probs=77.2
Q ss_pred CCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEE
Q psy12426 406 PFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIA 485 (616)
Q Consensus 406 ~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a 485 (616)
...+|++|.++++..++.+++.|+|.+|.. ++.+|.+|.|+|+..++.|.... .+....++|.+|.|++.|.|||+|
T Consensus 4 ~~~~P~~P~~~~~~~~s~~sv~l~W~~p~~-~g~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~v~~L~p~t~Y~frV~A 80 (106)
T 1x4x_A 4 GSSGPDQCKPPQVTCRSATCAQVNWEVPLS-NGTDVTEYRLEWGGVEGSMQICY--CGPGLSYEIKGLSPATTYYCRVQA 80 (106)
T ss_dssp SCCSCCCCCCCCCEEEETTEEEEECCCCSC-SSSCCCEEEEEEESSTTSCCEEE--EESCSEEEEESCCSSCEEEEEEEE
T ss_pred CCCCcCCCCCCEEEEcCCCEEEEEEcCCCC-CCCcceEEEEEEEcCCCceEEEE--eCCcceEEEcCCCCCCEEEEEEEE
Confidence 457889999999999999999999998765 56679999999987765554332 244679999999999999999999
Q ss_pred EcCCCCCCCCCCCCCEE
Q psy12426 486 VNKGGPGEPSKASAPVT 502 (616)
Q Consensus 486 ~n~~G~g~~s~~~~~~~ 502 (616)
.|..|.|++|......|
T Consensus 81 ~n~~G~g~~S~~v~~~T 97 (106)
T 1x4x_A 81 LSVVGAGPFSEVVACVT 97 (106)
T ss_dssp ECSSCCCCBCCCEEEEC
T ss_pred EcCCcCCCCcCCEEEEC
Confidence 99999999887554433
No 233
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.55 E-value=1.2e-14 Score=142.05 Aligned_cols=212 Identities=11% Similarity=-0.051 Sum_probs=114.4
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCcee--ccCCcceEEEcCCeEEEEEEE-----eee
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYIN--RDQLSDIKVRAGSNFEFDINV-----IGE 243 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~--~~~~~~~~v~~g~~~~l~c~~-----~~~ 243 (616)
...|.|.+++.+|.|.|+|.|.|..|....+ ..+.+.. .++.+. ...+....+..|+.+.|.|.+ .+.
T Consensus 78 ~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~---~~l~V~~--~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~ 152 (349)
T 4dep_C 78 KDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA---FPLEVVQ--KDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSS 152 (349)
T ss_dssp TTEEEESSCCGGGCEEEEEEEECSSCEEEEE---EEEEEEC--CCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTT
T ss_pred CCEEEEccCChhhCEEEEEEEecCCceEEEE---EEEEEec--CCcccCcccccCcceeeecCccEEEEcCCCcccccCC
Confidence 3489999999999999999999987653321 1122222 111111 122345678899999999985 778
Q ss_pred cCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCC-CCc---eeeEEEEEecCCC---CCCC-
Q psy12426 244 PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSW-GTD---KGTAKVTVLDIPS---PPEG- 315 (616)
Q Consensus 244 p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~-g~~---~~~~~l~v~~~p~---~p~~- 315 (616)
|.+.+.|++++..+....++... + ..|.|.++...|.|.|+|.|.|.. |.. .....+.+...+. +|.-
T Consensus 153 p~~~v~W~k~~~~l~~~~~~~~~--~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~ 228 (349)
T 4dep_C 153 VKPTITWYMGCYKIQNFNNVIPE--G--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIH 228 (349)
T ss_dssp SCCEEEEEETTEECCSCSSEEEE--T--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC
T ss_pred CCceEEEeeCCEECCCccceeec--C--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEe
Confidence 99999999999987554443322 2 389999999999999999999976 443 4556666655321 1110
Q ss_pred -Cc--c-ceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEE-----------Ecc----ccccceEEeccccCC
Q psy12426 316 -PL--K-PSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWV-----------PMG----DVSGTYTRAENLIEG 376 (616)
Q Consensus 316 -~~--~-~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~-----------~~~----~~~~~~~~i~~L~~~ 376 (616)
+. . +....+..+.|.|.......+.+...+ .|...+...-. ... ......+.|.++...
T Consensus 229 ~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v--~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 306 (349)
T 4dep_C 229 SPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEV--WWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSE 306 (349)
T ss_dssp ----------------CCCEEEEECCCTTCCCEE--EEESSCC--------CCCCEEEECCTTCCEEEEECC--------
T ss_pred cCCCceeEEEecCCcEEEEEEEEEccCCCCCCEE--EEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHH
Confidence 01 0 022344556666664321111122222 22111110000 000 011234788888888
Q ss_pred Ce-EEEEEEEEecCcCCC
Q psy12426 377 HD-YNFRVKAVNKIGESL 393 (616)
Q Consensus 377 ~~-y~~~v~a~n~~g~~~ 393 (616)
+. +.|+|.|.|..|...
T Consensus 307 d~~G~Y~C~a~N~~G~~~ 324 (349)
T 4dep_C 307 DLKRSYVCHARSAKGEVA 324 (349)
T ss_dssp -----CEEEEECSSCEEE
T ss_pred HcCCcEEEEEEcCCCcEE
Confidence 88 999999999998754
No 234
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.55 E-value=1e-14 Score=112.67 Aligned_cols=94 Identities=24% Similarity=0.347 Sum_probs=79.0
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeE-eecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKAC-IVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
.+|++|.++.+.. ..+++.|+|.+|.. ++++|++|.|+|+..++.|.... ......+.|++.+|.+++.|.|||.|+
T Consensus 6 ep~~pP~~l~v~~-~~~sv~L~W~pP~~-~~~~I~gY~vey~~~~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~ 83 (108)
T 1v5j_A 6 SGLSPPRGLVAVR-TPRGVLLHWDPPEL-VPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAF 83 (108)
T ss_dssp CCCCCCEEEEEEE-CSSSEEEEEECCSC-CSSCCCBEEEEEEETTCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEEE
T ss_pred CCCCCCcceEEEE-eCCEEEEEECCCCC-CCCCCcEEEEEEEeCCCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 5678888898875 56789999998875 66789999999998555798654 346678999999999999999999999
Q ss_pred cCCCCCCCCCCCCCEEe
Q psy12426 487 NKGGPGEPSKASAPVTC 503 (616)
Q Consensus 487 n~~G~g~~s~~~~~~~~ 503 (616)
|..|.|++|......|.
T Consensus 84 n~~G~s~pS~~~~v~T~ 100 (108)
T 1v5j_A 84 AGSFVSDPSNTANVSTS 100 (108)
T ss_dssp ETTEEEEECSCCCCCCS
T ss_pred cCCCCcCCCCCEEEEeC
Confidence 99999999987776554
No 235
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.55 E-value=1.7e-15 Score=131.45 Aligned_cols=111 Identities=11% Similarity=-0.002 Sum_probs=74.0
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.|.|..|....+ ....+.+......|.+ ...+..+.|.|.+.+.|.+.+.|++
T Consensus 62 sL~I~~v~~~D~G~Y~C~~~n~~g~~~~~-~~~~l~V~~~~~~p~i---------~~~~~~v~L~C~~~g~p~p~i~W~~ 131 (176)
T 1hng_A 62 DLKIKNLTRDDSGTYNVTVYSTNGTRILN-KALDLRILEMVSKPMI---------YWECSNATLTCEVLEGTDVELKLYQ 131 (176)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTCCEEEE-EEEEEEEECCCCCCEE---------EEETTTTEEEEECSSCSSCEEEEEE
T ss_pred cEEEcccccccCEEEEEEEEeCCCCEEEE-EEEEEEEeCCCCCCEE---------EecCCcEEEEEEecCCCCcEEEEEE
Confidence 47777888888888888887776653101 0111222222222332 1234468999999999999999999
Q ss_pred CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 304 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l 304 (616)
++..+..+.+ +.|.++...|.|.|+|.|.|..|.......+
T Consensus 132 ~g~~l~~~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 172 (176)
T 1hng_A 132 GKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVV 172 (176)
T ss_dssp TTEEEEEESS-----------SEEEEECSCCSSCEEEEEEETTEEEEEEECC
T ss_pred CCEECCCCCc-----------EEEEEEEccCCeEEEEEEEecCCCceecccc
Confidence 9988765443 2334666889999999999998877665544
No 236
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.55 E-value=8.1e-14 Score=132.18 Aligned_cols=204 Identities=10% Similarity=-0.034 Sum_probs=133.6
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecC-ceeEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI-PTKEW 250 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~-~~~~W 250 (616)
..|.|.++...|.|.|+|.|.| |. .. ...+.+. .+|.+. ..+....+.+|+.+.|.|.+.+ |. +.+.|
T Consensus 57 ~~L~i~~~~~~d~G~Y~C~~~n--g~--~~--~~~l~V~---~~~~~~-~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W 125 (290)
T 2o26_X 57 NEWIQEKAEATRTGTYTCSNSN--GL--TS--SIYVFVR---DPAKLF-LVGLPLFGKEDSDALVRCPLTD-PQVSQYSL 125 (290)
T ss_dssp SEEEETTCCGGGCEEEEEEESS--SC--EE--EEEEEEE---CSSCCB-CCCCCEEEETTSCEEECCCBSC-CSCEEEEE
T ss_pred ceEEEeccCHHhCeEEEEEeeC--Cc--cE--EEEEEEe---CCCccc-ccccceEEecCCeEEEeCcCCC-CCCceEEE
Confidence 6899999999999999999998 43 11 1122222 233332 3455678889999999999996 77 89999
Q ss_pred -EECCeeecccCcEEEEecCCceEEEecCCCCCCcE-EEEEEEEcCCCCc-eeeEEEEEec----CCCCCCCCccceeec
Q psy12426 251 -LCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSG-IYTLAVKNSWGTD-KGTAKVTVLD----IPSPPEGPLKPSNIT 323 (616)
Q Consensus 251 -~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g-~y~c~a~n~~g~~-~~~~~l~v~~----~p~~p~~~~~~~~~~ 323 (616)
.+++..+..+.++.....+ .|.|.++...|.| .|+|.|.|..+.. ...+.+.+.. +|.....+.......
T Consensus 126 ~~~~g~~l~~~~~~~~~~~~---~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~ 202 (290)
T 2o26_X 126 IECDGKSLPTDLTFVPNPKA---GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKK 202 (290)
T ss_dssp EETTSCCCCTTCEEEEETTT---EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCT
T ss_pred EeCCCcCCCCCCceeeCCCC---CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEec
Confidence 5688777666666555443 8999999999999 9999999985543 3356677653 232211112233456
Q ss_pred CCeEEEEEeCCCCCCCCceEEEEEEEEeCCC---CCE-----EEc--cccccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 324 KSSCNLEWRAPRDDGGTDILHYVVEKMDMET---GRW-----VPM--GDVSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 324 ~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~---~~~-----~~~--~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
+..+.|.|...... .+. .+.+.+..... ... ... .......+.|.++...+.+.|.|.|.|..|..
T Consensus 203 G~~v~l~C~~~g~p--~p~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~ 278 (290)
T 2o26_X 203 GDTFTVVCTIKDVS--TSV-NSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSA 278 (290)
T ss_dssp TCCEEEEEEEEESS--TTC-EEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEE
T ss_pred CCcEEEEEEEecCC--cce-eEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcE
Confidence 77899999864322 111 12222211110 000 000 01234578999999999999999999999865
No 237
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.55 E-value=1.1e-14 Score=112.33 Aligned_cols=86 Identities=21% Similarity=0.388 Sum_probs=71.1
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee--ccceEEEeecCCCCCceeEeeeccCCccceeec
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL--RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKC 78 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~--~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~ 78 (616)
||+|. ..|+++.+.+|+.+.|.|.+.|.|.|.|+|+|||+.|.. .++|....
T Consensus 5 PP~i~-~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~------------------------- 58 (100)
T 3knb_A 5 PPKIE-ALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN------------------------- 58 (100)
T ss_dssp EEEEC-CCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEE-------------------------
T ss_pred CCEEE-eCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeec-------------------------
Confidence 68887 458999999999999999999999999999999999874 34554432
Q ss_pred cccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 79 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 79 ~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
......|.|.++...|.|.|.|.|.|..|....+
T Consensus 59 ---~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~ 92 (100)
T 3knb_A 59 ---TDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSAT 92 (100)
T ss_dssp ---CSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ---ccceEEEEEcCCCccCCEEEEEEEEECCCEEEEE
Confidence 1224579999999999999999999999965433
No 238
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.55 E-value=3.4e-14 Score=114.85 Aligned_cols=106 Identities=26% Similarity=0.432 Sum_probs=86.3
Q ss_pred CCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeC---CC-CceEeEee--cCCccEEEcCC
Q psy12426 399 SPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPK---YG-PWEKACIV--PANITATSVPD 472 (616)
Q Consensus 399 ~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~---~~-~~~~~~~~--~~~~~~~~l~~ 472 (616)
..+.......+|++|.++.+..++.+++.|+|.+| .+++.+|.+|.|+|+.. .. .|...... ......+++.+
T Consensus 7 ~~~~~~~~~~~P~~P~~l~~~~~~~~sv~l~W~p~-~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~ 85 (124)
T 1wis_A 7 GTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPG-YDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPD 85 (124)
T ss_dssp CCCCSCCCCCCCCCCEEEEEESCCSSCEEEEEECC-CCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECS
T ss_pred ccccccCCCCCCccCCCCEEEEecCCEEEEEEECC-CCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCC
Confidence 34444455678999999999999999999999865 46677899999999873 33 78765433 56688999999
Q ss_pred CCCCCeEEEEEEEEcCCCCCCCCCCCCCEEecc
Q psy12426 473 LKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 473 L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
|.|++.|.|||+|+|..|.|++|..+..+++..
T Consensus 86 L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~ 118 (124)
T 1wis_A 86 LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQ 118 (124)
T ss_dssp CCTTSEECCCCEEECSSCBCCCCCCCCCEECCC
T ss_pred CCCCCEEEEEEEEEECCccCCCcCCccceEcCC
Confidence 999999999999999999999999877666543
No 239
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.55 E-value=9e-14 Score=125.28 Aligned_cols=124 Identities=13% Similarity=0.067 Sum_probs=82.9
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCC-CCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeee----cC
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGE-PSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE----PI 245 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~-~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~----p~ 245 (616)
...|.|.+++..|.|.|.|.+.+..+... .......+.+......|.+.. +. .+.+|+.+.|.|.+.+. |.
T Consensus 81 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~--~~--~~~~G~~v~L~C~~~~~~~~~p~ 156 (214)
T 2zg1_A 81 NCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF--LE--PLESGRPTRLSCSLPGSCEAGPP 156 (214)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC----C--CCCTTCCEEEEEECTTCCSCSSC
T ss_pred eEEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec--Cc--cccCCCeEEEEEEeccCCCCCCC
Confidence 34799999999999999999998753211 111223344444444566532 12 25689999999999874 88
Q ss_pred ceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy12426 246 PTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 304 (616)
Q Consensus 246 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l 304 (616)
+.+.|++++..+.... ......|.|..+..+|.|.|+|.|.|..+.......+
T Consensus 157 p~v~W~~~~~~~~~~~------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v 209 (214)
T 2zg1_A 157 LTFSWTGNALSPLDPE------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTV 209 (214)
T ss_dssp CEEEEESSTTSSSCSS------CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEE
T ss_pred ceEEEeCCCCccCCCC------ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEE
Confidence 9999999986543211 1234589999999999999999999976554444433
No 240
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=8.3e-14 Score=111.89 Aligned_cols=104 Identities=17% Similarity=0.207 Sum_probs=81.3
Q ss_pred cCCEEccCCCCCCC-CCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEeecCCccEEEcCCCC
Q psy12426 398 QSPITAKDPFGRPD-RPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACIVPANITATSVPDLK 474 (616)
Q Consensus 398 s~~~~~~~~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~~~~~~~~~~l~~L~ 474 (616)
+..+.+.+....|. +|.++++..++.+++.|+|.+|.. +.|.+|.|+|+..++ .+.......+....++|.+|.
T Consensus 6 S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~---g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~ 82 (119)
T 2ee2_A 6 SGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLE---KIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLL 82 (119)
T ss_dssp SSCCCCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCSC---TTCCEEEEEEEESSSCGGGCEEEEEETTCSEEEECSCC
T ss_pred CCCEEEECCCcCCCCCCCcEEEEEccCCEEEEEecCCCC---CccceEEEEEEECCCcccCcEEEEcCCCEeEEEECCCC
Confidence 34555666666666 566999999999999999998765 469999999987764 222333445667899999999
Q ss_pred CCCeEEEEEEEEcCCCCCCCCCCCCCEEec
Q psy12426 475 EGEEYEFRVIAVNKGGPGEPSKASAPVTCK 504 (616)
Q Consensus 475 p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~ 504 (616)
|++.|.|+|+|+|..|.|++|....+.|..
T Consensus 83 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 112 (119)
T 2ee2_A 83 PDTQYFIEVGACNSAGCGPPSDMIEAFTKK 112 (119)
T ss_dssp TTCEEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred CCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 999999999999999999998876544433
No 241
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.54 E-value=1.2e-13 Score=128.57 Aligned_cols=124 Identities=13% Similarity=0.079 Sum_probs=82.9
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccC--------------CCceeccCCcceEEEcCCeEE
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKV--------------SPYINRDQLSDIKVRAGSNFE 235 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~--------------~P~~~~~~~~~~~v~~g~~~~ 235 (616)
....|.|.+++++|.|.|.|.+.|..+..........+.+..... .|.+ ...+..+.+.+|+++.
T Consensus 77 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v-~~~p~~~~v~~G~~v~ 155 (259)
T 3omz_A 77 KNLRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKV-TQAQSSVSMPVRKAVT 155 (259)
T ss_dssp CCCEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEE-ECCCCCEEEETTCCEE
T ss_pred CeEEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeee-EEeCCEEEEcCCCCEE
Confidence 445899999999999999999998765211111111233322111 2333 4455678899999999
Q ss_pred EEEEEeee-cCceeEEEECCe--eec------------ccCcEEEE--ecCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 236 FDINVIGE-PIPTKEWLCNDI--TII------------SKDRFKIV--NDDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 236 l~c~~~~~-p~~~~~W~~~~~--~~~------------~~~~~~~~--~~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
|.|.+.+. +.+.+.|++... .+. ...++.+. .......|.|.+++..|+|.|.|.+.+.
T Consensus 156 L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 156 LNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp ECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred EEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 99998875 788999998431 110 12344443 2233467999999999999999999853
No 242
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.54 E-value=1.1e-13 Score=122.39 Aligned_cols=178 Identities=15% Similarity=0.098 Sum_probs=123.2
Q ss_pred CCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEc-cccccceEEeccccCCCeEEEEEEEEecCcC
Q psy12426 313 PEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPM-GDVSGTYTRAENLIEGHDYNFRVKAVNKIGE 391 (616)
Q Consensus 313 p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~-~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~ 391 (616)
|.+ +.+.... ....|.|.++...++ .+ .|.|++..- ..|... .....+.+.|.+|.++..|.++|+|.++.|.
T Consensus 5 P~n-v~~~s~n-~~~iL~W~pp~~~~~-~v-~Y~V~y~~~--~~w~~~c~~~~~~~c~lt~l~~~~~Y~~rV~A~~~~~~ 78 (201)
T 3lqm_A 5 PEN-VRMNSVN-FKNILQWESPAFAKG-QL-TFTAQYLSY--RIFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFADEH 78 (201)
T ss_dssp CEE-EEEEEET-TEEEEEEECCCCSSS-CC-EEEEEEEET--TEEEEEEEEESSSEEECTTSCSSSCEEEEEEEEETTEE
T ss_pred Ccc-cEEEEEC-CceEEEECCCCCCCC-Ce-EEEEEEEEC--CCcccCcCccCCCEEECCCCccCCCEEEEEEEecCCCc
Confidence 444 5554444 457899998766544 44 599999875 356532 2345678999999999999999999999887
Q ss_pred CCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCC---------cceeEEEEEeeCCCCceEeEeec
Q psy12426 392 SLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGS---------PISQYIIEKKPKYGPWEKACIVP 462 (616)
Q Consensus 392 ~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~---------~i~~Y~i~~~~~~~~~~~~~~~~ 462 (616)
+.++.. .+ .......+++| .+.+ ....+++.|.|.+|...+++ .+..|+|.|.+.++.-.. ...
T Consensus 79 S~~s~~--~f-~~~~~t~~~PP-~v~~-~~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~--~~~ 151 (201)
T 3lqm_A 79 SDWVQI--TF-SPVDDTIIGPP-GMQV-EVLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKF--QIT 151 (201)
T ss_dssp CCCEEE--EE-CHHHHSBCCCC-EEEE-EEETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCE--EEC
T ss_pred Ccceee--ee-eecccCeeCCC-EEEE-EEeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEE--EEE
Confidence 776531 11 11112345555 5666 44578999999988643322 378999998876652222 223
Q ss_pred CCccEEEcCCCCCCCeEEEEEEEEcC--CCCCCCCCCCCCEEe
Q psy12426 463 ANITATSVPDLKEGEEYEFRVIAVNK--GGPGEPSKASAPVTC 503 (616)
Q Consensus 463 ~~~~~~~l~~L~p~t~Y~~~v~a~n~--~G~g~~s~~~~~~~~ 503 (616)
.....++|.+|.|++.|.|+|+|.+. .|.|.+|....+.+.
T Consensus 152 ~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~ 194 (201)
T 3lqm_A 152 PQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTT 194 (201)
T ss_dssp CSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECC
T ss_pred ecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeC
Confidence 45678999999999999999999986 678888876555443
No 243
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.54 E-value=6.9e-15 Score=114.96 Aligned_cols=86 Identities=20% Similarity=0.295 Sum_probs=72.1
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||+|. ..|+++.|.+|+.+.|.|.+.|+|.|.|+|+|||..|....+|.....
T Consensus 13 pP~f~-~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~-------------------------- 65 (107)
T 3knb_B 13 PPCFL-RFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPAD-------------------------- 65 (107)
T ss_dssp EEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEE--------------------------
T ss_pred CCEEE-eCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeec--------------------------
Confidence 57776 458999999999999999999999999999999999986666644321
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
.....|.|.++...|.|.|.|.|.|..|....+
T Consensus 66 --~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 98 (107)
T 3knb_B 66 --GAEHGLLLTAALPTDAGVYVCRARNAAGEAYAA 98 (107)
T ss_dssp --TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred --CceEEEEEecCChhhCEEEEEEEEECCCEEEEE
Confidence 124579999999999999999999999965443
No 244
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.54 E-value=2.9e-14 Score=112.55 Aligned_cols=96 Identities=26% Similarity=0.466 Sum_probs=78.4
Q ss_pred CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEeecCCccEEEcCCCCCCCeEEEEEE
Q psy12426 407 FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACIVPANITATSVPDLKEGEEYEFRVI 484 (616)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~ 484 (616)
..+|.+|..+.+..++.+++.|.|.+|..+++.+|.+|.|+|+..+. .|.... .+....+++.+|.|++.|.|||+
T Consensus 5 ~~~P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~v~~L~p~t~Y~frV~ 82 (109)
T 1x5x_A 5 SSGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKY--DGEDLAYTVKNLRRSTKYKFKVI 82 (109)
T ss_dssp CCCCCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEE--EESCSEEEEESCCSSCEEEEEEE
T ss_pred CCCCcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeE--eCCccEEEECCCCCCCEEEEEEE
Confidence 35778888888999999999999998877767689999999988765 455433 23467999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCEEec
Q psy12426 485 AVNKGGPGEPSKASAPVTCK 504 (616)
Q Consensus 485 a~n~~G~g~~s~~~~~~~~~ 504 (616)
|+|..|.|++|......|..
T Consensus 83 A~n~~G~s~~S~~~~~~T~~ 102 (109)
T 1x5x_A 83 AYNSEGKSNPSEVVEFTTCP 102 (109)
T ss_dssp EECSSCEEEECCCEEEECCC
T ss_pred EEeCCCCcCCccCEEeEeCC
Confidence 99999999988765544443
No 245
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.54 E-value=2.2e-14 Score=129.72 Aligned_cols=127 Identities=9% Similarity=-0.006 Sum_probs=79.3
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCC---CCCCCCCCCEEecccc-CCCceeccCCcceEEEcCCeEEEEEEEee-ecC
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGP---GEPSDPTAPHIARAKK-VSPYINRDQLSDIKVRAGSNFEFDINVIG-EPI 245 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~---~~~s~~~~~~~~~~~~-~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~ 245 (616)
...|.|.+++.+|.|.|+|.|.|..|. ...+. ...+.+.... .+|.+....+ ...+..|+.+.|.|.+.+ .|.
T Consensus 74 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~-~~~l~V~~~~~~~P~~~~~~~-~~~~~~~~~v~L~C~~~g~~p~ 151 (218)
T 3s96_B 74 DRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGG-GTKVTVLGQPKSTPTLTVFPP-SSEELKENKATLVCLISNFSPS 151 (218)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEEEETTEEEEEECC-CEEEEEESCCCBCCEEEEECC-CHHHHHTTEEEEEEEEEEEBSS
T ss_pred eEEEEEccCCcccCEEEEEEEecCCCCceeEEEcC-cEEEEEecCCCCCceEEeeCC-CcccccCCcEEEEEEECcccCC
Confidence 347999999999999999999998761 11111 1123333222 4565543222 222345689999999998 466
Q ss_pred c-eeEEEECCeeecccCcEE--EEecCC---ceEEEecCCCCCCcEEEEEEEEcCCCCce
Q psy12426 246 P-TKEWLCNDITIISKDRFK--IVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDK 299 (616)
Q Consensus 246 ~-~~~W~~~~~~~~~~~~~~--~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~~~ 299 (616)
+ .+.|++++..+..+.... ....+. ...|.|......|.|.|+|.|.|..+...
T Consensus 152 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~ 211 (218)
T 3s96_B 152 GVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVE 211 (218)
T ss_dssp CCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEE
T ss_pred CeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccc
Confidence 6 899999999876421111 111111 12477777777789999999999866443
No 246
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.53 E-value=2.5e-14 Score=128.88 Aligned_cols=125 Identities=8% Similarity=-0.053 Sum_probs=81.0
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecC--cee
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI--PTK 248 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~--~~~ 248 (616)
...|.|.+++.+|.|.|+|.|.|..+..... ...+.+.....+|.+.... ....+..|+.+.|.|.+.+.++ +.+
T Consensus 70 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~--~~~l~V~~~~~~p~v~~~~-~~~~~~~~~~v~l~C~~~g~~p~~~~v 146 (213)
T 3r06_A 70 DSSFTISSLESEDIGSYYCQQYYNYPWTFGP--GTKLEIKRADAKPTVSIFP-PSSEQLGTGSATLVCFVNNFYPKDINV 146 (213)
T ss_dssp EEEEEESSCCGGGCSEEEEEECSSSSCEECC--CEEEEECCCCBCCEEEEEC-CCHHHHTTTEEEEEEEEEEEBSSCEEE
T ss_pred EEEEEECCCCcccCEEEEEecccCCceEEcC--CceEEEeccCCCceeeeeC-CCceecCCCCcEEEEEEeeecCCceEE
Confidence 3478999999999999999998875432111 1223333335566664322 2223346778999999998764 389
Q ss_pred EEEECCeeecccC--cEEEEec--CC---ceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 249 EWLCNDITIISKD--RFKIVND--DK---STKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 249 ~W~~~~~~~~~~~--~~~~~~~--~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
.|++++..+..+. ....... +. ...|.|......|.|.|+|.|.|.....
T Consensus 147 ~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 147 KWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp EEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred EEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 9999998876431 1111111 11 1357777777778999999999975443
No 247
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.53 E-value=2.9e-14 Score=114.59 Aligned_cols=100 Identities=17% Similarity=0.265 Sum_probs=83.3
Q ss_pred cCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCC
Q psy12426 398 QSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEG 476 (616)
Q Consensus 398 s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~ 476 (616)
+..+.+.+....|++|.++++..++.+++.|+|.+|...++ .|.+|.|+|+..+. .+............++|.+|.|+
T Consensus 6 S~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 84 (119)
T 1wfn_A 6 SGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNG-ILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTAL 84 (119)
T ss_dssp SCCCSCCSSCCSCCCCSCCEEESCCSSEEEEECCCCTTCCS-CCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTT
T ss_pred CCCEEEECCCCCCCCCCceEEEECCCCEEEEEEcCCCCCCC-cEEEEEEEEEECCCCCceEEEEeCCCceEEEEcCCCCC
Confidence 45666777778999999999999999999999998875545 59999999998765 33333445567889999999999
Q ss_pred CeEEEEEEEEcCCCCCCCCCCC
Q psy12426 477 EEYEFRVIAVNKGGPGEPSKAS 498 (616)
Q Consensus 477 t~Y~~~v~a~n~~G~g~~s~~~ 498 (616)
+.|.|+|+|.|..|.|++|...
T Consensus 85 t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 85 TTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp CEEEEEEEEECSSCEEEEEEEE
T ss_pred CEEEEEEEEEcCCccCCCCCCE
Confidence 9999999999999999988764
No 248
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.53 E-value=1.7e-13 Score=126.62 Aligned_cols=129 Identities=12% Similarity=-0.009 Sum_probs=77.8
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEee-ecCc-e
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPIP-T 247 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~~-~ 247 (616)
....|.|.+++.+|.|.|+|.+.+..+.... ...+.+ ..+|.+..... ..+..|..+.|.|.+.+ .|.+ .
T Consensus 80 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~---~~~L~V---~~~P~v~~~~~--~~~~~~~~~~L~C~~~g~~P~pi~ 151 (248)
T 3pv7_A 80 GDASLRLPGIQLEEAGEYRCEVVVTPLKAQG---TVQLEV---VASPASRLLLD--QVGMKENEDKYMCESSGFYPEAIN 151 (248)
T ss_dssp TBCCEEESSCCGGGCEEEEEEEEETTEEEEE---EEEEEE---EBCCEEEEECC----------CEEEEEEEEEBSSCCE
T ss_pred CcEEEEeCCCCHHHCeEEEEEEEeCCcccee---EEEEEE---ecCCceEEecC--CccccCCCcEEEEEEccEECCCeE
Confidence 4457999999999999999999997664221 111222 23566543222 23446777889999999 7888 9
Q ss_pred eEEEECCeeecccC------c-EEEEecC-C----ceEEEecCCCCCCcEEEEEEEEcCCCCcee--eEEEEE
Q psy12426 248 KEWLCNDITIISKD------R-FKIVNDD-K----STKLKVFDSKRGDSGIYTLAVKNSWGTDKG--TAKVTV 306 (616)
Q Consensus 248 ~~W~~~~~~~~~~~------~-~~~~~~~-~----~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~--~~~l~v 306 (616)
+.|++++..+.... . ....... . ...|.|......|.|.|+|.|.|..+.... .+.|.|
T Consensus 152 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 152 ITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp EEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred EEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 99999986432110 0 0111111 1 246888888888999999999998876544 444444
No 249
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.53 E-value=3.6e-14 Score=128.35 Aligned_cols=127 Identities=15% Similarity=0.068 Sum_probs=79.2
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCC--CCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEee-ecCc-
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPG--EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPIP- 246 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~--~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~~- 246 (616)
..|.|.+++.+|.|.|+|.|.|..+.. .... ...+.+.. ...+|.+....+. ..+..|+.+.|.|.+.+ .|.+
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~-~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~ 156 (219)
T 1c1e_H 79 AYLQINNLKNEDMATYFCARGTTIVRAMDYWGQ-GTSLTVSSAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPV 156 (219)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTTTEEEEECC-CEEEEECCCCCBCCEEEEECCC-SSSCCSSEEEEEEEEEEEBSSCC
T ss_pred EEEEECCCCcccCEEEEEEEeccCcccceeecC-ceEEEEecCCCCCCeEEEecCc-cccccCCeEEEEEEcccccCCCe
Confidence 479999999999999999999976321 1111 11233332 2234555322222 23468999999999998 8888
Q ss_pred eeEEEECCeeecccCcEEEEecCC---ceEEEecCCCCCCcEEEEEEEEcCCCCceee
Q psy12426 247 TKEWLCNDITIISKDRFKIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 301 (616)
Q Consensus 247 ~~~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~ 301 (616)
.+.|++++..+...........+. ...|.|..... |.|.|+|.|.|..|.....
T Consensus 157 ~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~ 213 (219)
T 1c1e_H 157 TVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVD 213 (219)
T ss_dssp EEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEE
T ss_pred EEEEEeCCcccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEE
Confidence 999999987642110000111111 13678844443 5699999999977665433
No 250
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.53 E-value=1.5e-14 Score=112.97 Aligned_cols=94 Identities=24% Similarity=0.381 Sum_probs=77.3
Q ss_pred CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEe---EeecCCccEEEcCCCCCCCeEEEE
Q psy12426 407 FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKA---CIVPANITATSVPDLKEGEEYEFR 482 (616)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~---~~~~~~~~~~~l~~L~p~t~Y~~~ 482 (616)
...|++|.++.+...+.+ +.|+|.+|..+++.+|.+|.|+|+..+. .|... ....+....++|.+|.|++.|.|+
T Consensus 4 ~~~P~~P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~r 82 (105)
T 2haz_A 4 MDTPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR 82 (105)
T ss_dssp CCCCCCCEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEE
T ss_pred CCCCcCCCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEE
Confidence 467888888888888877 9999999877777779999999998876 57532 122235689999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCE
Q psy12426 483 VIAVNKGGPGEPSKASAPV 501 (616)
Q Consensus 483 v~a~n~~G~g~~s~~~~~~ 501 (616)
|+|+|..|.|++|....+.
T Consensus 83 V~A~n~~G~g~~S~~~~~~ 101 (105)
T 2haz_A 83 LAALNGKGLGEISAASEFK 101 (105)
T ss_dssp EEEEETTEECCCCCCEEEE
T ss_pred EEEEcCCccCCCcCCEeeE
Confidence 9999999999999866543
No 251
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.53 E-value=3.4e-14 Score=131.86 Aligned_cols=124 Identities=8% Similarity=-0.050 Sum_probs=81.2
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeec-C-ceeE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEP-I-PTKE 249 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p-~-~~~~ 249 (616)
..|.|.+++..|.|.|+|.|.|..+...... ..+.+.....+|.+....+... ...|+.+.|.|.+.+.+ . +.+.
T Consensus 113 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~--~~l~V~~~~~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~ 189 (254)
T 2c1o_A 113 FTLKISRVEAEDLGIYYCVQGSHFPPTFGAG--TKLELKRADAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVK 189 (254)
T ss_dssp EEEEESSCCGGGCSEEEEEECSSSSCEEBCC--EEEEECCCCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECcCCcccCEEEEEEEEcCcceEecCC--EEEEECCCCCCCeeEeecCChh-hccCCcEEEEEEEecccCCCcEEE
Confidence 3789999999999999999988754311111 1233333334566543222222 23577999999999854 3 4699
Q ss_pred EEECCeeecccCc--EEEEecCC-----ceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 250 WLCNDITIISKDR--FKIVNDDK-----STKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 250 W~~~~~~~~~~~~--~~~~~~~~-----~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
|++++..+..... .......+ ...|.|.++...|.|.|+|.|.|.....
T Consensus 190 W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 190 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp EEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred EEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 9999988764411 11111111 3479999999999999999999976544
No 252
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.52 E-value=5.6e-14 Score=127.69 Aligned_cols=130 Identities=9% Similarity=-0.036 Sum_probs=81.0
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE-eeecCcee
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTK 248 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~-~~~p~~~~ 248 (616)
...+|.|.+++.+|.|.|+|.|.|..|..... ........+|.+... +.......+..+.+.|.+ .+.|.+.+
T Consensus 81 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~c~~~~~~P~~~~ 154 (225)
T 4fmk_A 81 RDATLAFRGLRVEDEGNYTCEFATFPNGTRRG-----VTWLRVIAQPENHAE-AQEVTIGPQSVAVARCVSTGGRPPARI 154 (225)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEEETTEEEEE-----EEEEEEEBCCEEEEE-ECCBCCSSSCEEEEEEEEEEEBSCCEE
T ss_pred CcEEEEEccCCHHHCcceEEEEEeCCCcceee-----eeeeeeecCCceeec-ccceeecceeeeeeeeeecCCCCCCEE
Confidence 34478999999999999999998876643221 111111223332211 222334455666666655 56688899
Q ss_pred EEEECCeeecccCcEEEEecCC---ceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEE
Q psy12426 249 EWLCNDITIISKDRFKIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVT 305 (616)
Q Consensus 249 ~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~ 305 (616)
.|.+++..+...........+. .+.|.|.++...|.|.|+|.|.|..|.......++
T Consensus 155 ~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~ 214 (225)
T 4fmk_A 155 TWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVT 214 (225)
T ss_dssp EEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred EEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEE
Confidence 9999876654322222211221 23699999999999999999999888765554444
No 253
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.52 E-value=1.7e-13 Score=125.93 Aligned_cols=119 Identities=10% Similarity=-0.009 Sum_probs=73.4
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecccc----------CCCceeccCCcceEEEcCCeEEEEEEEee
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKK----------VSPYINRDQLSDIKVRAGSNFEFDINVIG 242 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~----------~~P~~~~~~~~~~~v~~g~~~~l~c~~~~ 242 (616)
.|.|.+++++|.|.|.|.|.|..+..... ...+.+.... .++.+ ...+....+.+|+++.|.|.+.+
T Consensus 72 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~--~~~L~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~G~~v~L~C~~~g 148 (242)
T 2znx_A 72 TLSINSVETEDFGMYFCQQSNSXPYTFGG--GTKLEITGGGGSGGGGSGGGGSDIQ-LQESGPSLVKPSQTLSLTCSVTG 148 (242)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECC--CEEEEEC---------------CCE-EEEECCSEECTTSCEEEEEEEES
T ss_pred EEEECCCChHHCEEEEEeEecCCceEECC--CEEEEEcCCCCCCccccccccccee-eecCCcceecCCCeEEEEEEEEc
Confidence 57777777777777777777654321101 0112222111 11112 12222345889999999999998
Q ss_pred ec--CceeEEEECC--eeec----------------ccCcEEEEe--cCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 243 EP--IPTKEWLCND--ITII----------------SKDRFKIVN--DDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 243 ~p--~~~~~W~~~~--~~~~----------------~~~~~~~~~--~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
.+ .+.+.|++++ ..+. ...++.+.. ......|.|.+++..|+|.|.|.|.|.
T Consensus 149 ~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 149 DSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp SCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred cccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 76 4789999842 2210 134555543 234568999999999999999999873
No 254
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.52 E-value=1.7e-12 Score=129.56 Aligned_cols=212 Identities=13% Similarity=0.075 Sum_probs=128.6
Q ss_pred ecCCCCCCcEEEEEEEEcCCCC---c---eeeEEEEEecCCCCCCCC--ccceeecCCeEEEEEeCCCCCCCCceEEEEE
Q psy12426 276 VFDSKRGDSGIYTLAVKNSWGT---D---KGTAKVTVLDIPSPPEGP--LKPSNITKSSCNLEWRAPRDDGGTDILHYVV 347 (616)
Q Consensus 276 i~~l~~~~~g~y~c~a~n~~g~---~---~~~~~l~v~~~p~~p~~~--~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v 347 (616)
+.+|.+...|.+++.|.+..|. + ..+..+.+...+..|..+ +.+.......+.+.|+++....+ ...|.|
T Consensus 175 ~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~~~~~l~c~W~~~~~~~~--~~~y~l 252 (419)
T 2gys_A 175 PEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVAS--SVSFGL 252 (419)
T ss_dssp TTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEEECSSSEEEEEEEEEHHHHT--TCCEEE
T ss_pred hhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEEECCceEEEeEEECCCCCCC--ceeEEE
Confidence 3489999999999999986432 2 223445554444433333 45555667789999996422111 245888
Q ss_pred EEEeCCC-----CC-EEEccc--c---------ccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEccCCCCCC
Q psy12426 348 EKMDMET-----GR-WVPMGD--V---------SGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITAKDPFGRP 410 (616)
Q Consensus 348 ~~~~~~~-----~~-~~~~~~--~---------~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p 410 (616)
.|+.... .. +..+.. . ....+.+.+|.+.+.|.++|.|.++.+.-.. ...+ .|
T Consensus 253 ~y~~~~~~g~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~~~~~~~---~~~v-------~p 322 (419)
T 2gys_A 253 FYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKS---SVNI-------QM 322 (419)
T ss_dssp EEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCCCEEEEG---GGSB-------CC
T ss_pred EEEecCccccccCcccccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEEEccCCccccc---eEEE-------EE
Confidence 8865421 11 222211 0 1225667788889999999988754432110 1111 34
Q ss_pred CCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEe--EeecCCccEEEcCCCCCCCeEEEEEEEEcC
Q psy12426 411 DRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKA--CIVPANITATSVPDLKEGEEYEFRVIAVNK 488 (616)
Q Consensus 411 ~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~ 488 (616)
.+| .+.+.. ..+.+.|+|.+|.......+..|+|.|+..+..|... .... ..+.+.|.+|.|++.|.|+|+|.+.
T Consensus 323 ~PP-~l~v~~-~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~w~~~~~~~~~-~~~~~~l~~L~p~t~Y~~qVRa~~~ 399 (419)
T 2gys_A 323 APP-SLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQ-NAHSMALPALEPSTRYWARVRVRTS 399 (419)
T ss_dssp CCC-EEEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEEEE-SCSEEECCCCCSSCCCEEEEEEEEC
T ss_pred CCC-CeEEEE-eCCeEEEEECCCcccccccceEEEEEEEcCCCCcceeeccccc-cccEEEeccCCCCCeEEEEEEEEEc
Confidence 555 355444 4789999999885322224779999999877666521 1222 5679999999999999999999998
Q ss_pred CC--CCCCCCCCCCEE
Q psy12426 489 GG--PGEPSKASAPVT 502 (616)
Q Consensus 489 ~G--~g~~s~~~~~~~ 502 (616)
.| .|.+|..+..+.
T Consensus 400 ~g~~~G~wS~WS~~~~ 415 (419)
T 2gys_A 400 RTGYNGIWSEWSEARS 415 (419)
T ss_dssp CTTCCBCCCCCCCCEE
T ss_pred CCCCCCccCCCCCCeE
Confidence 74 566777666544
No 255
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.52 E-value=7.4e-14 Score=124.21 Aligned_cols=71 Identities=17% Similarity=0.130 Sum_probs=54.7
Q ss_pred EcCCeEEEEEEEeeecCceeEEEECCeeecccC--cEEEEecCCceEEEecCC-CCCCcEEEEEEEEcCCCCc-eeeEEE
Q psy12426 229 RAGSNFEFDINVIGEPIPTKEWLCNDITIISKD--RFKIVNDDKSTKLKVFDS-KRGDSGIYTLAVKNSWGTD-KGTAKV 304 (616)
Q Consensus 229 ~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~l-~~~~~g~y~c~a~n~~g~~-~~~~~l 304 (616)
.+|+.+.|.|. +.|.+.+.|++++..+.... +...... ..|.|.++ ...|+|.|+|.|.|..|.. +....+
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~---~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l 200 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDE---DHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYL 200 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEET---TEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEE
T ss_pred ecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCC---CEEEEeeCCccccCEEEEEEeccCCCCceeEEEEE
Confidence 38999999998 78999999999998875431 2222222 38999999 9999999999999998853 333333
No 256
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.51 E-value=2.4e-13 Score=126.19 Aligned_cols=72 Identities=18% Similarity=0.268 Sum_probs=54.3
Q ss_pred cceEEEcCCeEEEEEEEeeec--CceeEEEEC--Ceee-----------------cccCcEEEEec--CCceEEEecCCC
Q psy12426 224 SDIKVRAGSNFEFDINVIGEP--IPTKEWLCN--DITI-----------------ISKDRFKIVND--DKSTKLKVFDSK 280 (616)
Q Consensus 224 ~~~~v~~g~~~~l~c~~~~~p--~~~~~W~~~--~~~~-----------------~~~~~~~~~~~--~~~~~l~i~~l~ 280 (616)
....+.+|+++.|.|.+.+.+ .+.+.|+++ +..+ ....++.+... .....|.|.+++
T Consensus 142 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 221 (256)
T 3ux9_B 142 GGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLR 221 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCC
Confidence 345688999999999999876 789999986 3221 01135555543 345679999999
Q ss_pred CCCcEEEEEEEEcCC
Q psy12426 281 RGDSGIYTLAVKNSW 295 (616)
Q Consensus 281 ~~~~g~y~c~a~n~~ 295 (616)
.+|+|.|+|.|.|..
T Consensus 222 ~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 222 AEDTAVYYCARYIDF 236 (256)
T ss_dssp GGGCEEEEEEEEETT
T ss_pred hhhCEEEEEEEEcCC
Confidence 999999999999853
No 257
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.51 E-value=4.5e-14 Score=129.55 Aligned_cols=127 Identities=7% Similarity=-0.041 Sum_probs=83.9
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeec--Ccee
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEP--IPTK 248 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p--~~~~ 248 (616)
...|.|.+++.+|.|.|+|.+.|..+..... ...+.+.....+|.+....+ ...+..|+.+.|.|.+.+.+ .+.+
T Consensus 93 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~--~~~l~V~~~~~~p~v~~~~~-~~~~~~g~~v~l~C~~~~~~p~~~~v 169 (237)
T 3sob_L 93 DFTLTISSLQPEDFATYYCQQSYTTPPTFGQ--GTKVEIKRTVAAPSVFIFPP-SDEQLKSGTASVVCLLNNFYPREAKV 169 (237)
T ss_dssp EEEEEESSCCGGGCEEEEEEECSSSSCEECC--CEEEEEECCCBCCEEEEECC-CHHHHHHTEEEEEEEEEEEBSSCCEE
T ss_pred EEEEEECCCChhhCeEEEEeeccCCceEEcC--cEEEEEecCCCCCceEEeCC-ChhhccCCceEEEEEEcccCCCceEE
Confidence 3479999999999999999998876531111 11244434455666643222 22233588899999999854 4799
Q ss_pred EEEECCeeecccC-c-EEEEec-CC----ceEEEecCCCCCCcEEEEEEEEcCCCCcee
Q psy12426 249 EWLCNDITIISKD-R-FKIVND-DK----STKLKVFDSKRGDSGIYTLAVKNSWGTDKG 300 (616)
Q Consensus 249 ~W~~~~~~~~~~~-~-~~~~~~-~~----~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 300 (616)
.|++++..+..+. . ...... ++ ...|.|.....+|.|.|+|.|.|.......
T Consensus 170 ~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 228 (237)
T 3sob_L 170 QWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 228 (237)
T ss_dssp EEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred EEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCce
Confidence 9999998876421 0 001111 11 246888888888999999999997654443
No 258
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.51 E-value=7.7e-15 Score=132.07 Aligned_cols=124 Identities=12% Similarity=0.004 Sum_probs=79.7
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCC-CCCCCCCCEEeccc-cCCCceeccCCcceEEEcCCeEEEEEEEeee-cC-ce
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPG-EPSDPTAPHIARAK-KVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PI-PT 247 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~-~~s~~~~~~~~~~~-~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~-~~ 247 (616)
..|.|.+++.+|.|.|+|.|.|..+.. .... ...+.+... ..+|.+....+ ...+..|+.+.|.|.+.+. |. +.
T Consensus 69 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~-~~~l~V~~~~~~~p~v~~~~~-~~~~~~g~~v~L~C~~~g~~p~~~~ 146 (212)
T 1nfd_E 69 ATLTISGAQPEDEAAYYCLSSYGDNNDLVFGS-GTQLTVLRGPKSSPKVTVFPP-SPEELRTNKATLVCLVNDFYPGSAT 146 (212)
T ss_dssp EEEEETTCCGGGCSEEEEEEEETTTTEEEECC-CEEEEEECCCCBCCEEECCCC-CHHHHHTTEECCCEEEEEEBSSCCE
T ss_pred EEEEECcCCcccCEEEEEEEEcccCcccccCC-ceEEEEccCCCCCCEEEeeCC-chHhccCCceEEEEEEEeeECCccE
Confidence 378899999999999999998732211 1111 112333221 24565543222 2223578999999999988 44 79
Q ss_pred eEEEECCeeecccCcEE-EEecCC----ceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 248 KEWLCNDITIISKDRFK-IVNDDK----STKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 248 ~~W~~~~~~~~~~~~~~-~~~~~~----~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
+.|++++..+....... ....++ ...|.|.++...|.|.|+|.|.|..+.
T Consensus 147 v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 147 VTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp EEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred EEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 99999998876442211 000010 135888899989999999999997665
No 259
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.51 E-value=5e-13 Score=126.37 Aligned_cols=138 Identities=12% Similarity=0.083 Sum_probs=89.8
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCC-CCCC--CCCCCCCEEeccc-------------cCCCceeccCCcceEEEcCCeE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKG-GPGE--PSDPTAPHIARAK-------------KVSPYINRDQLSDIKVRAGSNF 234 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~-g~~~--~s~~~~~~~~~~~-------------~~~P~~~~~~~~~~~v~~g~~~ 234 (616)
...|.|.+++++|.|.|.|.+.|.. |... ... ...+.+... ..++.+ ...+..+.+.+|+++
T Consensus 100 ~~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~-~~~L~V~~~~~~~~~~~~~~~~~~~~~v-~~~p~~~~v~~G~~v 177 (291)
T 2gki_A 100 TAYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQ-GTSVTVSSRGGGGSGGGGSGGGGSDLVM-SQSPSSLAVSAGEKV 177 (291)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECGGGTTCEEEECC-CEEEEECC----------------CCCE-ECSCSEEEEETTSCE
T ss_pred EEEEEECcCCHHHCEEEEEEEeccccccccceeCC-CcEEEEecCCccccccccCCCCCccceE-EcCCCEEEEcCCCcE
Confidence 3479999999999999999999874 2110 010 112332220 012223 334556789999999
Q ss_pred EEEEEEeeecCc------eeEEEECC--ee---ec---------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 235 EFDINVIGEPIP------TKEWLCND--IT---II---------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 235 ~l~c~~~~~p~~------~~~W~~~~--~~---~~---------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
+|.|.+.+.+.+ .+.|+++. .. +. ...++.+...+....|.|.+++.+|+|.|.|.|.|.
T Consensus 178 ~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 257 (291)
T 2gki_A 178 TMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYY 257 (291)
T ss_dssp EEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred EEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 999999988776 89999963 21 11 134666555555678999999999999999999985
Q ss_pred CCCc-eeeEEEEEecCC
Q psy12426 295 WGTD-KGTAKVTVLDIP 310 (616)
Q Consensus 295 ~g~~-~~~~~l~v~~~p 310 (616)
.... .....|.+...+
T Consensus 258 ~~~~fg~gt~l~v~~~~ 274 (291)
T 2gki_A 258 HMYTFGSGTKLEIKHHH 274 (291)
T ss_dssp TEEEECCCEEEEEECC-
T ss_pred CceEEcCCEEEEEEeeE
Confidence 3321 223344554443
No 260
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.51 E-value=8.1e-14 Score=112.27 Aligned_cols=102 Identities=20% Similarity=0.195 Sum_probs=84.3
Q ss_pred CEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCC-CCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCC
Q psy12426 400 PITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPK-KDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGE 477 (616)
Q Consensus 400 ~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~-~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t 477 (616)
.+.+.+...+|++|.++++...+.+++.|.|.+|. ..++ .|.+|.|+|+..+. .|............++|.+|.|++
T Consensus 8 ~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 86 (120)
T 1x5f_A 8 EHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHG-DNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPAT 86 (120)
T ss_dssp SCCCCCCCCCCCCCEEEEEEEECSSCEEEEEECCSSCSSC-CSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTC
T ss_pred CEEecCCCCCCCCCCCcEEEecCCCEEEEEECCCCCCCCC-cEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCC
Confidence 34455667889999999999999999999999887 4444 79999999998865 566555556678899999999999
Q ss_pred eEEEEEEEEcCCCCCCCCCCCCCEE
Q psy12426 478 EYEFRVIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 478 ~Y~~~v~a~n~~G~g~~s~~~~~~~ 502 (616)
.|.|+|+|+|..|.|++|....+.|
T Consensus 87 ~Y~~~V~A~n~~G~g~~S~~~~~~T 111 (120)
T 1x5f_A 87 VYIFRVMAQNKHGSGESSAPLRVET 111 (120)
T ss_dssp EEEEEEEEECSSCEEEECCCEEEEC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEe
Confidence 9999999999999999887655433
No 261
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.51 E-value=9.1e-14 Score=126.23 Aligned_cols=137 Identities=17% Similarity=0.083 Sum_probs=81.5
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc-e
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-T 247 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~ 247 (616)
...|.|.+++.+|.|.|.|.+.+..+... .. ...+.+.. ...+|.+....+. ..+..|+.+.|.|.+.+. |.+ .
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~-~~-~~~L~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~ 154 (227)
T 1mju_H 78 TAYMQLSSLTSDDSAVYYCANKLGWFPYW-GQ-GTLVTVSAAKTTAPSVYPLAPV-CGDTSGSSVTLGCLVKGYFPEPVT 154 (227)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEEE-CC-CEEEEECSSCCBCCEEEEECCC-C------CEEEEEEEEEEBSSCCE
T ss_pred eEEEEECCCCcccCEEEEEEECCCCceEE-cC-cEEEEEcCCCCCCCEEEEecCC-ccccCCCcEEEEEEeecEeCCCeE
Confidence 34899999999999999999998632111 11 11233332 2244555432222 245679999999999986 766 9
Q ss_pred eEEEECCeeecc--cCcEEEEecC---CceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCC
Q psy12426 248 KEWLCNDITIIS--KDRFKIVNDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPP 313 (616)
Q Consensus 248 ~~W~~~~~~~~~--~~~~~~~~~~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p 313 (616)
+.|++++..+.. .... . ..+ ..+.|.|.....++ |.|+|.|.|..+.......+.+..+|..|
T Consensus 155 v~W~~~g~~~~~~~~~~~-~-~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~ 222 (227)
T 1mju_H 155 LTWNSGSLSSGVHTFPAV-L-QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKP 222 (227)
T ss_dssp EEEGGGTBCTTEEECCCE-E-ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC----
T ss_pred EEEecCCCcCCcEECCce-e-cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCC
Confidence 999999875421 1111 1 111 12478899988877 99999999976655555555555554433
No 262
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.51 E-value=4.6e-14 Score=126.85 Aligned_cols=127 Identities=9% Similarity=-0.030 Sum_probs=83.3
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeeec--Cce
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEP--IPT 247 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p--~~~ 247 (616)
...|.|.+++++|.|.|+|.|.|..|..... ....+.+.. ...+|.+....+ ...+..|+.+.|.|.+.+.+ .+.
T Consensus 67 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~-~~~~l~V~~~~~~~P~v~~~~~-~~~~~~g~~v~l~C~~~g~~p~~~~ 144 (211)
T 3tv3_L 67 TASLTVSGLQTDDEAVYYCGSLVGNWDVIFG-GGTKLTVLGQPKAAPSVTLFPP-SSEELQANKATLVCLISDFYPGAVT 144 (211)
T ss_dssp EEEEEEESCCGGGCEEEEEEEEETTTEEEEC-CCEEEEECCSCCBCCEEEEECC-CHHHHHTTCEEEEEEEEEEBSSCCE
T ss_pred EEEEEECCCChhHCEEEEEEEecCCCceeEC-CCceEEEeCCCCcCCeeEecCC-chhhhcCCCeEEEEEeeeecCCCeE
Confidence 3479999999999999999999987621111 111233332 224666543222 22233799999999999863 478
Q ss_pred eEEEECCeeecccCcE--EEEecCC----ceEEEecCCCCCCcEEEEEEEEcCCCCce
Q psy12426 248 KEWLCNDITIISKDRF--KIVNDDK----STKLKVFDSKRGDSGIYTLAVKNSWGTDK 299 (616)
Q Consensus 248 ~~W~~~~~~~~~~~~~--~~~~~~~----~~~l~i~~l~~~~~g~y~c~a~n~~g~~~ 299 (616)
+.|++++..+..+... .....+. ...|.|..+...|.|.|+|.|.|..+...
T Consensus 145 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~ 202 (211)
T 3tv3_L 145 VAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 202 (211)
T ss_dssp EEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEE
T ss_pred EEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEE
Confidence 9999999987542111 0111111 14688888888899999999999765443
No 263
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=7.8e-14 Score=111.95 Aligned_cols=108 Identities=23% Similarity=0.398 Sum_probs=86.7
Q ss_pred CCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCC
Q psy12426 399 SPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGE 477 (616)
Q Consensus 399 ~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t 477 (616)
....+.+....|++|.++++..++.+++.|+|.+|..+ + .|.+|.|+|+..+. .|............++|.+|.|++
T Consensus 7 ~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~-g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 84 (118)
T 2yrz_A 7 GSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCE-R-PLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNH 84 (118)
T ss_dssp SCCTTSSSCSCCCCCCCCEECCCBTTEEEEECCCCCCS-S-CEEEEEEEEEBSSSCCEEEEEESCTTCCEEEEESCCTTC
T ss_pred CcceeecCCCCCCCCCceEEEeCCCCEEEEEeCCCCCC-C-CccEEEEEEEECCCCceEEEEcCCCCcCEEEeCCCCCCC
Confidence 34556667789999999999999999999999987654 3 79999999998766 666655555678899999999999
Q ss_pred eEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCC
Q psy12426 478 EYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAP 510 (616)
Q Consensus 478 ~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p 510 (616)
.|.|+|+|+|..|.|++|.. .+++.+...+|
T Consensus 85 ~Y~~~V~A~n~~G~g~~S~~--~~~~~t~~~~p 115 (118)
T 2yrz_A 85 SYVFRVRAQSQEGWGREREG--VITIESQVSGP 115 (118)
T ss_dssp EEEEEEEEEESSCEEEEEEE--EEECCCSCCCC
T ss_pred EEEEEEEEEcCCcCCCCcCC--ceEeCCCCCCC
Confidence 99999999999999998863 34444433333
No 264
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.51 E-value=2.2e-13 Score=110.18 Aligned_cols=104 Identities=17% Similarity=0.196 Sum_probs=82.6
Q ss_pred cCcCCCCccccCCEEccCCCC------CCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEee
Q psy12426 388 KIGESLPLVCQSPITAKDPFG------RPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIV 461 (616)
Q Consensus 388 ~~g~~~~~~~s~~~~~~~~~~------~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~ 461 (616)
..|.+.+ +..+.+.+... +|++|.++++...+ +++.|+|.+|...+ +.|.+|.|+|+.....+ ....+
T Consensus 3 ~~G~g~~---S~~~~~~T~~~~~~~~~~P~~P~~l~~~~~~-~sv~l~W~~P~~~~-g~i~~Y~v~y~~~~~~~-~~~~~ 76 (126)
T 1x5i_A 3 SGSSGPA---TDWLSAETFESDLDETRVPEVPSSLHVRPLV-TSIVVSWTPPENQN-IVVRGYAIGYGIGSPHA-QTIKV 76 (126)
T ss_dssp SCCCCCC---CCCCCSCCCCTTSBCSSCCCSCSEEEEEEET-TEEEEEEECCSCTT-BCCCEEEEEECSSCGGG-EEEEC
T ss_pred CCccCCC---CCCEEeECccccCccCCCCCCCCeeEEEecC-CEEEEEEcCCCCCC-CCEeEEEEEEEcCCCCc-eEEEe
Confidence 4566666 44556666666 89999999999887 99999999887554 46999999998532233 33345
Q ss_pred cCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCC
Q psy12426 462 PANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKA 497 (616)
Q Consensus 462 ~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~ 497 (616)
......++|.+|.|++.|.|+|+|+|..|.|+++..
T Consensus 77 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~ 112 (126)
T 1x5i_A 77 DYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYE 112 (126)
T ss_dssp CTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCC
T ss_pred CCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceee
Confidence 677889999999999999999999999999998863
No 265
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=3.9e-13 Score=107.05 Aligned_cols=102 Identities=31% Similarity=0.506 Sum_probs=90.7
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.| ...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+........|.|.++...|.|.|+|.|.|
T Consensus 6 ~pp~i-~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 6 SGPQI-IQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCEE-SCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCEE-EeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 45666 45567889999999999999999999999999999998877788887766678999999999999999999999
Q ss_pred CCCCceeeEEEEEecCCCCCCCC
Q psy12426 294 SWGTDKGTAKVTVLDIPSPPEGP 316 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~p~~p~~~ 316 (616)
..|.....+.|.|...|.+|..+
T Consensus 85 ~~g~~~~~~~l~V~~~p~~P~~p 107 (114)
T 2cqv_A 85 KLGSRQAQVNLTVVDKPDPPAGT 107 (114)
T ss_dssp SSCEEECCEEEEEECSCSCCCCC
T ss_pred CCCcEEEEEEEEEECCCCCCCCC
Confidence 99998899999999999888775
No 266
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.50 E-value=1e-13 Score=111.88 Aligned_cols=96 Identities=33% Similarity=0.601 Sum_probs=82.0
Q ss_pred CCCCCCCCC--EEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEe-EeecCCccEEEcCCCCCCCeEEEEEE
Q psy12426 408 GRPDRPGQP--TVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKA-CIVPANITATSVPDLKEGEEYEFRVI 484 (616)
Q Consensus 408 ~~p~~p~~~--~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~-~~~~~~~~~~~l~~L~p~t~Y~~~v~ 484 (616)
.+|.+|.++ .+...+.+++.|+|.+| .+++.+|.+|.|+|+..++.|... .........++|.+|.|++.|.|||+
T Consensus 16 ~~P~~P~~~~~~~~~~~~~sv~l~W~~p-~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~ 94 (121)
T 1wf5_A 16 QLPHAPEHPVATLSTVERRAINLTWTKP-FDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLC 94 (121)
T ss_dssp CCCCCCSSCEEEECSSSTTEEEEECCCC-CCCSSCEEEEEEEEECTTCCCEEEESSCCTTCCEEEEESCCTTCEEEEEEE
T ss_pred eCCccCCCcceeeEeccCCEEEEEEcCC-CCCCCcceEEEEEEEcCCCCceEeEcccCCCccEEEECCcCCCCEEEEEEE
Confidence 578899999 78788899999999987 556678999999999877688776 44566788999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCEEec
Q psy12426 485 AVNKGGPGEPSKASAPVTCK 504 (616)
Q Consensus 485 a~n~~G~g~~s~~~~~~~~~ 504 (616)
|.|..|.|++|..+..+++.
T Consensus 95 A~n~~G~s~~S~~~~~~~t~ 114 (121)
T 1wf5_A 95 AVNDVGKGQFSKDTERVSLP 114 (121)
T ss_dssp EEESSCEEEECCCCSCEECC
T ss_pred EEcCCccCCCcCCcceeEcC
Confidence 99999999999887655544
No 267
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.50 E-value=1.9e-12 Score=115.02 Aligned_cols=179 Identities=12% Similarity=0.062 Sum_probs=112.2
Q ss_pred ccceee-cCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-----------CCEEEcc--ccccceEEeccccCCCeEEEE
Q psy12426 317 LKPSNI-TKSSCNLEWRAPRDDGGTDILHYVVEKMDMET-----------GRWVPMG--DVSGTYTRAENLIEGHDYNFR 382 (616)
Q Consensus 317 ~~~~~~-~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~-----------~~~~~~~--~~~~~~~~i~~L~~~~~y~~~ 382 (616)
+.+... ....+..+|.+.... ......|.+.+..... .....+. ......+.+..+...+.|.|+
T Consensus 7 lsC~~~~~~~~~~C~W~~g~~~-~l~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~~~Y~~~ 85 (206)
T 3v6o_A 7 ISCETDGYLTKMTCRWSTSTIQ-SLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLLSGYTMW 85 (206)
T ss_dssp CEEEECTTSSCEEEEECCCC---------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTTSCEEEE
T ss_pred EEEEECCCCcEEEEEecCCCcC-CcccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhcccEEEE
Confidence 444444 357899999964332 2111267887764321 0001111 123346778888888999999
Q ss_pred EEEEecCcCCCCccccCCEEc-cCCCCCCCCCCCCEEEEe-cCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEe
Q psy12426 383 VKAVNKIGESLPLVCQSPITA-KDPFGRPDRPGQPTVTDW-GKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKA 458 (616)
Q Consensus 383 v~a~n~~g~~~~~~~s~~~~~-~~~~~~p~~p~~~~~~~~-~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~ 458 (616)
|.|.|..|.... ..+.+ ......|++|.++.+... ..+.+.|+|.+|.... .+..|+|+|+..+. .|...
T Consensus 86 V~a~N~~G~~~s----~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~--~~l~yev~y~~~~~~~~w~~~ 159 (206)
T 3v6o_A 86 IRINHSLGSLDS----PPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPE--NNLQFQIRYGLSGKEVQWKMY 159 (206)
T ss_dssp EEEC---CCEEC----CCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC----------CEEEEEEEEESSSSCCCEEE
T ss_pred EEEEcCCccccC----CcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCC--CcEEEEEEEEECCCCCceEEE
Confidence 999999987542 22222 223357899999998765 6889999999875432 35789999998763 78776
Q ss_pred EeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEE
Q psy12426 459 CIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 459 ~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~ 502 (616)
.........+.|.+|.|++.|.|+|+|.+..|.|.+|..+..+.
T Consensus 160 ~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSeWS~~~~ 203 (206)
T 3v6o_A 160 EVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNWSNPAY 203 (206)
T ss_dssp EECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCCCCCCEE
T ss_pred ecccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCCCCcceE
Confidence 54333345799999999999999999999888888888776544
No 268
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.50 E-value=1.8e-13 Score=111.31 Aligned_cols=95 Identities=36% Similarity=0.525 Sum_probs=78.0
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCC---CCceEeEeecCCccEEEcCCCCCCCeEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKY---GPWEKACIVPANITATSVPDLKEGEEYEFRVI 484 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~---~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~ 484 (616)
.+|++|.++.+..++.+++.|+|.+| .+++.+|.+|.|+|+... +.|.......+.... .+.+|.|++.|.|||+
T Consensus 15 ~~P~~P~~~~~~~~~~~sv~l~W~p~-~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~-~i~~L~p~t~Y~frV~ 92 (127)
T 1uey_A 15 DVPNPPFDLELTDQLDKSVQLSWTPG-DDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTT-AQLNLSPYVNYSFRVM 92 (127)
T ss_dssp CSCCCCEEEEEECCSSSCEEEEEECC-CCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCE-EEECCCTTCEECCEEE
T ss_pred cCCcCCCCcEEEEccCCEEEEEEECC-CCCCCCceEEEEEEEECCCCCCccEEEeeeCCCceE-EEecCCCCCEEEEEEE
Confidence 68899999999999999999999965 556778999999998764 268776655555555 4779999999999999
Q ss_pred EEcCCCCCCCCCCCCCEEec
Q psy12426 485 AVNKGGPGEPSKASAPVTCK 504 (616)
Q Consensus 485 a~n~~G~g~~s~~~~~~~~~ 504 (616)
|.|..|.|++|..+..+++.
T Consensus 93 A~n~~G~s~~S~~~~~~~T~ 112 (127)
T 1uey_A 93 AVNSIGKSLPSEASEQYLTK 112 (127)
T ss_dssp EEESSCBCCCCSCCCCEECC
T ss_pred EEeCCccCCccccccceEcC
Confidence 99999999999886555543
No 269
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.50 E-value=3.4e-14 Score=134.98 Aligned_cols=208 Identities=11% Similarity=0.010 Sum_probs=131.7
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecC--ce
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI--PT 247 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~--~~ 247 (616)
....|.|.+++..|.|.|+|.|.|..|.... ...+.+. .+|......+....+.+|+.+.|.|.+.+ |. +.
T Consensus 49 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~---~~~l~V~---~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~ 121 (292)
T 4dkd_C 49 SSSILSTNNATFQNTGTYRCTEPGDPLGGSA---AIHLYVK---DPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAG 121 (292)
T ss_dssp TEEEEEESSCCGGGCSCEEECCCC----CCE---EECCEEC---CSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSS
T ss_pred ceEEEEEcccccccCEEEEEEEccCCCCcce---EEEEEEc---CccccccccCCeEEEcCCCcEEEeeeCCC-CCccee
Confidence 3458999999999999999999988765421 1122222 23332233456788999999999999998 44 68
Q ss_pred eEEEEC-CeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eeeEEEEEecCCC-CCC---CCcccee
Q psy12426 248 KEWLCN-DITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAKVTVLDIPS-PPE---GPLKPSN 321 (616)
Q Consensus 248 ~~W~~~-~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~l~v~~~p~-~p~---~~~~~~~ 321 (616)
+.|+++ +..+....++.....+ .|.|.++...|.|.|+|.+.|..|.. ...+.+.+...+. +|. .+.....
T Consensus 122 v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~ 198 (292)
T 4dkd_C 122 VSLVRVRGRPLMRHTNYSFSPWH---GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVR 198 (292)
T ss_dssp EEEEEGGGCCCCSSCCEECCSSS---CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCC
T ss_pred EEEEecCCCccccCCcccccCCc---eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeE
Confidence 999997 4445444454443333 49999999999999999999887755 4477777775322 221 1111122
Q ss_pred ecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCC----EEE--ccc-cccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 322 ITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGR----WVP--MGD-VSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 322 ~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~----~~~--~~~-~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
..+..+.|.|...... + .+.+.|...+... -.. ... .....+.|.++...+.+.|+|.|.|..|..
T Consensus 199 ~~g~~v~l~C~~~~~~---~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 271 (292)
T 4dkd_C 199 IRGEAAQIVCSASSVD---V--NFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKH 271 (292)
T ss_dssp CSSSCEEEEEEEEESS---S--CCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEE
T ss_pred ecCCCEEEEEEecCCC---C--ceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCc
Confidence 3577888888753211 1 1223332221110 000 000 123478899999999999999999999874
No 270
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.50 E-value=2.3e-12 Score=132.17 Aligned_cols=118 Identities=12% Similarity=0.022 Sum_probs=75.7
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc-c--cCCCceeccCCcceEEEcCCeEE-EEEEEeeecC--c
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA-K--KVSPYINRDQLSDIKVRAGSNFE-FDINVIGEPI--P 246 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~-~--~~~P~~~~~~~~~~~v~~g~~~~-l~c~~~~~p~--~ 246 (616)
.|.|......|.|.|+|.|.|..+... . ..+.... . ..+|.+....+.. .|+.+. |.|.+.|.++ .
T Consensus 362 ~L~i~~~~~~d~g~y~C~a~n~~~~~~-~---~~~~~~~~~~~~~~p~v~~~~~~~----~~~~~~~L~C~~~g~~P~~i 433 (512)
T 1zvo_C 362 RLTLPRSLWNAGTSVTCTLNHPSLPPQ-R---LMALREPAAQAPVKLSLNLLASSD----PPEAASWLLCEVSGFSPPNI 433 (512)
T ss_pred EEEEchHHhcCCCeEEEEEEeCCCCCC-c---eeEEeecCCCCCCCCEEEEEccCc----CCCCceEEEEEEeeeCCCCc
Confidence 588888888999999999999876532 1 1122111 1 2456553332222 688899 9999998644 3
Q ss_pred eeEEEECCeeecccCcE--EEE-ecCCc-----eEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 247 TKEWLCNDITIISKDRF--KIV-NDDKS-----TKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 247 ~~~W~~~~~~~~~~~~~--~~~-~~~~~-----~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
.+.|+++|..+...... ... ..+.. +.|.|......+.|.|+|.|.|.....
T Consensus 434 ~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~ 493 (512)
T 1zvo_C 434 LLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRT 493 (512)
T ss_pred EEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCC
Confidence 68999999987654211 111 11211 346666666667999999999975543
No 271
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.50 E-value=2.5e-13 Score=123.10 Aligned_cols=129 Identities=15% Similarity=0.058 Sum_probs=84.1
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCC---CCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeee-cC
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPG---EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PI 245 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~---~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~ 245 (616)
...|.|.+++++|.|.|.|.+.|..|.. .... ...+.+.. ...+|.+....+.. .+..|+.+.|.|.+.+. |.
T Consensus 80 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~-~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~ 157 (222)
T 1q9r_B 80 ILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQ-GTLVTVSAAKTTPPSVYPLAPGS-AAQTNSMVTLGCLVKGYFPE 157 (222)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCC-CEEEEECSSCCBCCEEEEECCCS-CCCCSSEEEEEEEEEEEBSS
T ss_pred eEEEEECcCCcccCeEEEEEEeccCCcccceEeCC-ceEEEeccCCCCCCeEEEccccc-cccCCCcEEEEEEEccEECC
Confidence 3479999999999999999999876421 1111 11233332 22455554322222 24579999999999986 88
Q ss_pred c-eeEEEECCeeecccCcEEEEecC---CceEEEecCCCCCCcEEEEEEEEcCCCCceeeE
Q psy12426 246 P-TKEWLCNDITIISKDRFKIVNDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 302 (616)
Q Consensus 246 ~-~~~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~ 302 (616)
+ .+.|++++..+...........+ ..+.|.|.++...| |.|+|.|.|..|......
T Consensus 158 p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~ 217 (222)
T 1q9r_B 158 PVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 217 (222)
T ss_dssp CCEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CCEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEE
Confidence 8 99999998765321111111111 12368899999889 999999999887654433
No 272
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.49 E-value=1.7e-13 Score=123.55 Aligned_cols=126 Identities=9% Similarity=0.014 Sum_probs=82.7
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc-eeE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-TKE 249 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~~~ 249 (616)
..|.|.+++.+|.|.|+|.|.|..+...... ...+.+.....+|.+....+... ...|+.+.|.|.+.+. |.+ .+.
T Consensus 72 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~-~~~l~V~~~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~P~~~~v~ 149 (216)
T 2xzc_L 72 ATLGITGLQTGDEADYYCGTWDSSLNPVFGG-GTKLEIKRTVAAPSVFIFPPSDE-QLKSGTASVVCLLNNFYPREAKVQ 149 (216)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSCEEEBC-CEEEEECCCCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECCCCcccCEEEEEEEEeCCCcceECC-CEEEEEcCCCCCCceEEeCCChh-hccCCcEEEEEEEEeEcCCceEEE
Confidence 3799999999999999999999876111111 11234433335666643222222 2358899999999984 554 899
Q ss_pred EEECCeeecccCcEE--EEecC-C----ceEEEecCCCCCCcEEEEEEEEcCCCCce
Q psy12426 250 WLCNDITIISKDRFK--IVNDD-K----STKLKVFDSKRGDSGIYTLAVKNSWGTDK 299 (616)
Q Consensus 250 W~~~~~~~~~~~~~~--~~~~~-~----~~~l~i~~l~~~~~g~y~c~a~n~~g~~~ 299 (616)
|++++..+..+.... ..... + .+.|.|..+...|.|.|+|.|.|......
T Consensus 150 W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 150 WKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp EEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred EEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 999998875441111 11111 1 13788999999999999999999765433
No 273
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.49 E-value=7.9e-14 Score=126.50 Aligned_cols=179 Identities=19% Similarity=0.238 Sum_probs=114.4
Q ss_pred cCCCCCCCCccceeecCCeEEEEEeCCCCCCCCc-eEEEEEEEEeCCC----CCEEEccc-----cccceEEeccccCCC
Q psy12426 308 DIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTD-ILHYVVEKMDMET----GRWVPMGD-----VSGTYTRAENLIEGH 377 (616)
Q Consensus 308 ~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~-i~~y~v~~~~~~~----~~~~~~~~-----~~~~~~~i~~L~~~~ 377 (616)
.+|..|.+ +.+.......+.+.|++ ...++.. ...|.+.|+.... ..|..+.. .....+...+|..++
T Consensus 28 ~pP~~P~~-l~C~~~~~~~~~c~W~p-~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~ 105 (236)
T 1axi_B 28 NSSGEPKF-TKCRSPERETFSCHWTD-EVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAI 105 (236)
T ss_dssp ----CCCE-EEEEBSSSSCEEEEECC-C--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSS
T ss_pred CCCCCCcC-CeEEeCCCCEEEEEecC-CCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccc
Confidence 35666665 55555677899999995 3333323 2467777754332 23666543 123456667889999
Q ss_pred eEEEEEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEE--EEecC----CeEEEEecCCCCC---CCCcceeEEEEE
Q psy12426 378 DYNFRVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTV--TDWGK----DHVDLEWTPPKKD---GGSPISQYIIEK 448 (616)
Q Consensus 378 ~y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~--~~~~~----~~v~l~W~~p~~~---~~~~i~~Y~i~~ 448 (616)
.|.|+|.| | .+.+.. ..+.+ .....|++|.++.+ ...+. ..+.|+|.+|... ++..+..|+|+|
T Consensus 106 ~Y~~~V~a-N-~~~s~~----~~~~~-~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry 178 (236)
T 1axi_B 106 PYCIKLTS-N-GGTVDE----KCFSV-DEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQY 178 (236)
T ss_dssp EEEEEEEE-T-TEEEEE----EEEEG-GGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEE
T ss_pred eEEEEEEE-C-CccCCC----eEeec-ccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEE
Confidence 99999999 8 332221 12222 22357888988853 33333 3499999988642 332578999999
Q ss_pred eeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCC--CCCCCCC
Q psy12426 449 KPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGG--PGEPSKA 497 (616)
Q Consensus 449 ~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G--~g~~s~~ 497 (616)
+..++ .|..... .....++|.+|.|++.|.|+|||.+..| .|++|..
T Consensus 179 ~~~~~~~w~~~~~--~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~ 228 (236)
T 1axi_B 179 KEVNETKWKMMDP--ILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEV 228 (236)
T ss_dssp EETTCSSCEECCC--BSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCC
T ss_pred EECCCCceEEEec--cCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCC
Confidence 98876 7775432 2357999999999999999999999888 6666654
No 274
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.3e-13 Score=108.68 Aligned_cols=95 Identities=18% Similarity=0.221 Sum_probs=77.1
Q ss_pred CCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCC-C---CceEeEeecCCccEEEcCCCCCCCeEE
Q psy12426 405 DPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKY-G---PWEKACIVPANITATSVPDLKEGEEYE 480 (616)
Q Consensus 405 ~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~-~---~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 480 (616)
+...+|++|.++++..++.+++.|+|.+|...+ +.|.+|.|+|+..+ . .|... ......++|.+|.|++.|.
T Consensus 3 T~~~~P~~p~~l~~~~~~~~sv~l~W~~p~~~~-g~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~ 78 (109)
T 2e7h_A 3 SGSSGPPAVSDIRVTRSSPSSLSLAWAVPRAPS-GAVLDYEVKYHEKGAEGPSSVRFL---KTSENRAELRGLKRGASYL 78 (109)
T ss_dssp SSCCSSCCCCCCEEEEEETTEEEEECCCCCCSS-SCCCEEEEEEEETTCCSTTTSEEE---EESSSEEEEESCCTTSCEE
T ss_pred CCCCCCCCCCccEEEecCCCEEEEEeCCCCCCC-CcEeEEEEEEEECCCCCCceeEEE---ccCCCEEEECCCCCCCeEE
Confidence 345788899999999999999999999886444 46999999998876 2 23322 2345699999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCEEe
Q psy12426 481 FRVIAVNKGGPGEPSKASAPVTC 503 (616)
Q Consensus 481 ~~v~a~n~~G~g~~s~~~~~~~~ 503 (616)
|+|+|.|..|.|++|....+.|.
T Consensus 79 ~~V~A~n~~G~g~~S~~~~~~T~ 101 (109)
T 2e7h_A 79 VQVRARSEAGYGPFGQEHHSQTQ 101 (109)
T ss_dssp EEEEEECSSCBCCCCSCEECCCC
T ss_pred EEEEEEeCCccCCCCCCEEEEcC
Confidence 99999999999999986655443
No 275
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.49 E-value=6.3e-14 Score=112.76 Aligned_cols=106 Identities=25% Similarity=0.343 Sum_probs=78.1
Q ss_pred CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeE---eecCCccEEEcCCCCCCCeEEEE
Q psy12426 407 FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKAC---IVPANITATSVPDLKEGEEYEFR 482 (616)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~---~~~~~~~~~~l~~L~p~t~Y~~~ 482 (616)
...|++|.++.+...+.+ +.|+|.+|..+++.+|.+|.|+|+..+. .|.... ........++|.+|.|++.|.|+
T Consensus 5 ~~~P~~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~r 83 (122)
T 2e3v_A 5 SSGPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR 83 (122)
T ss_dssp -CCCCCCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEE
T ss_pred CcCCcCCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEE
Confidence 367888888888888877 9999999877777779999999998876 774321 22345789999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCEEec-cCcCCCeec
Q psy12426 483 VIAVNKGGPGEPSKASAPVTCK-PRFVAPVID 513 (616)
Q Consensus 483 v~a~n~~G~g~~s~~~~~~~~~-~~~~~p~~~ 513 (616)
|+|+|..|.|++|....+.+.. ..+.+|.+.
T Consensus 84 V~A~n~~G~g~~S~~~~~~t~~~~~P~~P~~~ 115 (122)
T 2e3v_A 84 LAALNGKGLGEISAASEFKTQPVREPSAPKLE 115 (122)
T ss_dssp EEEEETTEECCCCCCEEEECCCCCCCC-----
T ss_pred EEEEeCCccCCCcccccccccCCCCCCCCeec
Confidence 9999999999999876653322 134555543
No 276
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.49 E-value=2.8e-13 Score=104.42 Aligned_cols=94 Identities=33% Similarity=0.618 Sum_probs=81.6
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeeccc--CcEEEEecCCceEEEecCCCCCCcEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISK--DRFKIVNDDKSTKLKVFDSKRGDSGIYTLAV 291 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~--~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a 291 (616)
.||.| ...+.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+...+....|.|.+++..|+|.|+|.|
T Consensus 4 ~PP~i-~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 3knb_A 4 IPPKI-EALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEEEE-CCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEE-EeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEE
Confidence 35666 45567889999999999999999999999999999998654 4677777777889999999999999999999
Q ss_pred EcCCCCceeeEEEEEec
Q psy12426 292 KNSWGTDKGTAKVTVLD 308 (616)
Q Consensus 292 ~n~~g~~~~~~~l~v~~ 308 (616)
.|..|....++.|.|..
T Consensus 83 ~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 83 GNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EECCCEEEEEEEEEEEE
Confidence 99999988888888764
No 277
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.49 E-value=2.4e-13 Score=125.44 Aligned_cols=119 Identities=11% Similarity=0.037 Sum_probs=74.7
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecccc----------CCCceeccCCcceEEEcCCeEEEEEEEee
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKK----------VSPYINRDQLSDIKVRAGSNFEFDINVIG 242 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~----------~~P~~~~~~~~~~~v~~g~~~~l~c~~~~ 242 (616)
.|.|.+++++|.|.|.|.|.|..+...... ..+.+.... .++.. ...+....+.+|++++|.|.+.+
T Consensus 77 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~G~~v~L~C~~~~ 153 (247)
T 1svz_A 77 TLKISRVEAEDLGIYYCFQGSHFPPTFGGG--TKLEIKGGGGSGGGGSGGGGSEVQ-LQQSGPELKKPGETVKISCKATN 153 (247)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCC--EEEEEC---------------CCE-EEECCCEEECTTCCEEEEEEEES
T ss_pred EEEECCCCHHHCEEEEEEEccCCccEECCC--EEEEEECCccccccccccccCceE-EeCCCceeecCCCcEEEEEEEcC
Confidence 677777777888888887776543211010 112222211 01222 22223346899999999999998
Q ss_pred ec--CceeEEEECC--eeec-----------------ccCcEEEEe--cCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 243 EP--IPTKEWLCND--ITII-----------------SKDRFKIVN--DDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 243 ~p--~~~~~W~~~~--~~~~-----------------~~~~~~~~~--~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
.+ .+.+.|++++ ..+. ...++.+.. ......|.|.+++..|+|.|.|.|.|.
T Consensus 154 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 154 YAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp SCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred cccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 75 5689999963 2110 134555543 344569999999999999999999984
No 278
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.5e-13 Score=109.18 Aligned_cols=99 Identities=23% Similarity=0.289 Sum_probs=82.4
Q ss_pred ccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEE
Q psy12426 403 AKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEF 481 (616)
Q Consensus 403 ~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~ 481 (616)
+.+...+|++|.++++..++.+++.|+|.+|.. .++.|.+|.|+|+..+. .|............++|.+|.|++.|.|
T Consensus 11 ~~~~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~-~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 89 (119)
T 2ed7_A 11 IPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAE-AKGNIQTFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTF 89 (119)
T ss_dssp CCCSSSSCCCCSCCEEEEECSSCEEEECCCCSC-CSSCEEEEEEEEEESSCCCCEEEECCCTTCCEEEECSCCSSSEEEE
T ss_pred CCCCCCCCcCCcceEEEecCCCEEEEEEeCCCC-CCCcEEEEEEEEEeCCCCcceeeEeecCCceEEEeCCCCCCCEEEE
Confidence 334567899999999999999999999998765 44579999999998776 5555555556688999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCCCEE
Q psy12426 482 RVIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 482 ~v~a~n~~G~g~~s~~~~~~~ 502 (616)
+|+|+|..|.|++|......|
T Consensus 90 ~V~A~n~~G~g~~S~~~~~~T 110 (119)
T 2ed7_A 90 RVVAYNEWGPGESSQPIKVAT 110 (119)
T ss_dssp CCEEEESSCBCSCCCCEEEEC
T ss_pred EEEEEcCCccCCCcCCEEEEe
Confidence 999999999999887665544
No 279
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.49 E-value=9.3e-14 Score=109.84 Aligned_cols=94 Identities=29% Similarity=0.455 Sum_probs=73.1
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCC-C-CceEeEeec-----------CCccEEEcCCCC
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKY-G-PWEKACIVP-----------ANITATSVPDLK 474 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~-~-~~~~~~~~~-----------~~~~~~~l~~L~ 474 (616)
.+|++|. +..++.+++.|+|.+|..++ .+|++|.|+|+..+ + .|....... +....+++.+|.
T Consensus 4 ~pP~~P~---v~~~~~~sv~L~W~~P~~~G-~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~ 79 (115)
T 2ic2_A 4 YPPTPPN---VTRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLK 79 (115)
T ss_dssp CCCCCCE---EEECC---EEEEEEEECCSS-CCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCC
T ss_pred CCCCcCE---eEEEeCCEEEEEEcCCCCCC-CCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCC
Confidence 4566664 77789999999999876655 78999999999873 3 787664321 335689999999
Q ss_pred CCCeEEEEEEEEcCCCCCCCCCCCCCEEecc
Q psy12426 475 EGEEYEFRVIAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 475 p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
|++.|.|||+|+|..|.|.+|..+..+.+.+
T Consensus 80 p~t~Y~FRV~A~N~~G~~~pS~~S~~~~~~~ 110 (115)
T 2ic2_A 80 PQHTYRFRILAVYSNNDNKESNTSAKFYLQP 110 (115)
T ss_dssp SSEEEEEEEEEEETTSCEEECCCCCCEEECC
T ss_pred CCCEEEEEEEEEeCCCCCCCCCCCCCEEeCC
Confidence 9999999999999999999999888777654
No 280
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.49 E-value=3.8e-14 Score=135.76 Aligned_cols=215 Identities=10% Similarity=-0.030 Sum_probs=126.8
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE-eeecCcee
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTK 248 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~-~~~p~~~~ 248 (616)
....|.|.+++.+|.|.|+|.|.|..+...... +.+.....++......+.......|+.+.|.|.+ .+.|.+.+
T Consensus 72 ~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i 147 (308)
T 4fom_A 72 NDATITLHNIGFSDSGKYICKAVTFPLGNAQSS----TTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHI 147 (308)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEETTTEEEEEE----EEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEE
T ss_pred CceEEEEccCCHHHCEEEEEEEeeCCCcceeee----eEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceE
Confidence 446799999999999999999998643221111 1111111122111333444555678899999975 58899999
Q ss_pred EEEECCeeecccCcEEEE-ecCCceEEEecCCCCCCcEEEEEEEEcCCCCceee--EEEEEecCCCCCCCCcc-ceeecC
Q psy12426 249 EWLCNDITIISKDRFKIV-NDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT--AKVTVLDIPSPPEGPLK-PSNITK 324 (616)
Q Consensus 249 ~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~--~~l~v~~~p~~p~~~~~-~~~~~~ 324 (616)
.|++++..+......... .......|.|.++...|.|.|+|.|.|..|..... ..|.+..+|.....+.. .....+
T Consensus 148 ~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g 227 (308)
T 4fom_A 148 DWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGR 227 (308)
T ss_dssp EECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTC
T ss_pred EEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeecc
Confidence 999998876432111000 00112379999999999999999999987765444 34444444432221111 223345
Q ss_pred CeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 325 SSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 325 ~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
..+.|.|...... ... .+.|...+...-..........+.|.++...+.+.|+|.|.|..|...
T Consensus 228 ~~v~l~C~~~g~P---~p~--~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~ 291 (308)
T 4fom_A 228 KGVNLKCNADANP---PPF--KSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRS 291 (308)
T ss_dssp CSCEEECCEEEES---CEE--EEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEE
T ss_pred ccEEEEEEEecCC---CCc--EEEEEECCeECCCcEEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEE
Confidence 6788888742211 111 233322211100001112334456778888899999999999999753
No 281
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.49 E-value=3.7e-13 Score=107.61 Aligned_cols=104 Identities=22% Similarity=0.279 Sum_probs=82.7
Q ss_pred cCCEEccCC--CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCC
Q psy12426 398 QSPITAKDP--FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLK 474 (616)
Q Consensus 398 s~~~~~~~~--~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~ 474 (616)
+..+.+.+. ..+|++|.++++..++.+++.|+|.+|...++ .|.+|.|+|+..+. .|... ......++|.+|.
T Consensus 4 S~~~~~~T~~~~~~P~~P~~l~~~~~~~~si~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~---~~~~~~~~i~~L~ 79 (116)
T 1x5g_A 4 GSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNG-EIQNYKLYYMEKGTDKEQDV---DVSSHSYTINGLK 79 (116)
T ss_dssp CCCCCCSSCCCSSCCCCCSSCEEEEEETTEEEEECCCCSCCSS-CCSEEEEEEEETTCCCCCCE---EECSSEEEECSCC
T ss_pred ccCeEEEcCCCCCCCcCCCccEEEecCCCEEEEEEeCCCCCCC-cccEEEEEEEECCCCccEEE---ecCCceEEEcCCC
Confidence 344455552 36888999999999999999999998765444 69999999998775 55322 2347899999999
Q ss_pred CCCeEEEEEEEEcCCCCCCCCCCCCCEEecc
Q psy12426 475 EGEEYEFRVIAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 475 p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
|++.|.|+|+|+|..|.|++|....+.|...
T Consensus 80 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 80 KYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp TTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred CCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 9999999999999999999998776655543
No 282
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.49 E-value=2.3e-13 Score=125.53 Aligned_cols=128 Identities=13% Similarity=0.032 Sum_probs=82.5
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCC-CCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGE-PSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP 246 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~-~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~ 246 (616)
...|.|.+++++|.|.|.|.|.+..+... .......+.+.. ...+|.+....+....+..|+.+.|.|.+.+.+++
T Consensus 76 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~ 155 (246)
T 4dzb_B 76 LSTLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD 155 (246)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSS
T ss_pred EEEEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCC
Confidence 34799999999999999999987644111 000111233332 22456554444444445569999999999997765
Q ss_pred --eeEEEECCeeecccCcEEEEe-------cCCc----eEEEecCCCCCC-cEEEEEEEEcCCCCc
Q psy12426 247 --TKEWLCNDITIISKDRFKIVN-------DDKS----TKLKVFDSKRGD-SGIYTLAVKNSWGTD 298 (616)
Q Consensus 247 --~~~W~~~~~~~~~~~~~~~~~-------~~~~----~~l~i~~l~~~~-~g~y~c~a~n~~g~~ 298 (616)
.+.|++++..+....+..... .++. ..|.|......| .|.|+|.|.|.....
T Consensus 156 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~ 221 (246)
T 4dzb_B 156 HVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 221 (246)
T ss_dssp CEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred ceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCC
Confidence 899999998876432211100 0111 247788777777 999999999965443
No 283
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.49 E-value=1.9e-12 Score=125.02 Aligned_cols=215 Identities=11% Similarity=0.054 Sum_probs=118.7
Q ss_pred CCCCeEEeecccCCCeEEEEEEEEeCCCCCCC--CCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc
Q psy12426 169 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP--SDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP 246 (616)
Q Consensus 169 ~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~--s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~ 246 (616)
.....|.|.+++.+|.|.|+|.|.|..+.... ......+.+...+.+|.+. .+ ...+..|+.+.|.|.+.+.|.+
T Consensus 71 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~--~~-~~~~~~g~~~~l~C~~~g~p~~ 147 (327)
T 2wng_A 71 NMDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVS--GP-AARATPQHTVSFTCESHGFSPR 147 (327)
T ss_dssp CCBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEE--CC-SSCBCTTCEEEEEEEEEEEBSS
T ss_pred CceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceee--cc-ccccCCCCEEEEEEEEeCccCC
Confidence 44568999999999999999999997653110 0011234444444555543 12 3557889999999999999876
Q ss_pred --eeEEEECCeeecccCcEEEEec-CC----ceEEEecCCCCCCcEEEEEEEEcCCCCc-eeeEEEEEe-cCCCCCCCCc
Q psy12426 247 --TKEWLCNDITIISKDRFKIVND-DK----STKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAKVTVL-DIPSPPEGPL 317 (616)
Q Consensus 247 --~~~W~~~~~~~~~~~~~~~~~~-~~----~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~l~v~-~~p~~p~~~~ 317 (616)
.+.|++++..+........... +. ...|.|.....++.|.|+|.|.|..+.. .......+. ....+|. +
T Consensus 148 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~--i 225 (327)
T 2wng_A 148 DITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPT--L 225 (327)
T ss_dssp CCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCE--E
T ss_pred CcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCE--E
Confidence 8999999988764432211111 11 1257777777667899999999987763 222222221 1112222 1
Q ss_pred cce---eecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCC-------CEEEcccc---ccceEEeccccCCCeEEEEEE
Q psy12426 318 KPS---NITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETG-------RWVPMGDV---SGTYTRAENLIEGHDYNFRVK 384 (616)
Q Consensus 318 ~~~---~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~-------~~~~~~~~---~~~~~~i~~L~~~~~y~~~v~ 384 (616)
.+. ...+..+.|.|...... . +.. .+.|...+.. ........ ....+.|......+.+.|.|.
T Consensus 226 ~~~~~~~~~G~~v~l~C~~~g~~-p-~~~--~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~ 301 (327)
T 2wng_A 226 EVTQQPVRAENQVNVTCQVRKFY-P-QRL--QLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQ 301 (327)
T ss_dssp EEEEECCSSTTCCEEEEEEEEEB-S-SCE--EEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEE
T ss_pred EEecCCcCCCCcEEEEEEEcccc-C-CCc--EEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEE
Confidence 111 12456677888753211 0 111 1222221110 01111111 013466777777788999999
Q ss_pred EEecCcCC
Q psy12426 385 AVNKIGES 392 (616)
Q Consensus 385 a~n~~g~~ 392 (616)
|.|..|..
T Consensus 302 a~N~~~~~ 309 (327)
T 2wng_A 302 VEHDGQPA 309 (327)
T ss_dssp EEETTCCC
T ss_pred EEeCCCCC
Confidence 99988764
No 284
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.49 E-value=3.2e-14 Score=116.88 Aligned_cols=107 Identities=19% Similarity=0.330 Sum_probs=85.8
Q ss_pred cCCEEccCCCCCCC-CCCCCEEEEecCCeEEEEecCCCCC-CCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCC
Q psy12426 398 QSPITAKDPFGRPD-RPGQPTVTDWGKDHVDLEWTPPKKD-GGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLK 474 (616)
Q Consensus 398 s~~~~~~~~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~~-~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~ 474 (616)
+..+.+.+....|. +|.++++...+.+++.|+|.+|..+ .++.|.+|.|+|+..+. .|............++|.+|.
T Consensus 6 S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~ 85 (132)
T 1x5h_A 6 SGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLD 85 (132)
T ss_dssp CCCCCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCCEEEEECCC
T ss_pred CCCEEEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEEEeCCCccEEEeCCCC
Confidence 45566667777777 6779999989999999999988652 45579999999998765 343333456778899999999
Q ss_pred CCCeEEEEEEEEcCCCCCCCCCCCCCEEec
Q psy12426 475 EGEEYEFRVIAVNKGGPGEPSKASAPVTCK 504 (616)
Q Consensus 475 p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~ 504 (616)
|++.|.|+|+|.|..|.|++|....+.|..
T Consensus 86 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 86 RGTEYNFRVAALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp SSCEEEEECEEEETTEEEEECCCEEEECCS
T ss_pred CCCEEEEEEEEEcCCccCCCCcCEEeEcCc
Confidence 999999999999999999998876655544
No 285
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=8e-13 Score=105.92 Aligned_cols=114 Identities=21% Similarity=0.301 Sum_probs=92.7
Q ss_pred CCCCCCCCCCCEEeccccCCCceecc--CCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceE
Q psy12426 196 GPGEPSDPTAPHIARAKKVSPYINRD--QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTK 273 (616)
Q Consensus 196 g~~~~s~~~~~~~~~~~~~~P~~~~~--~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 273 (616)
|.+..+.....+.+.....+|.|... .+..+.+..|+.+.|.|.+.|.|.+.+.|++++..+. ..++.+...+....
T Consensus 2 G~s~p~~~~~~v~~~~v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~ 80 (118)
T 2e7c_A 2 SSGSSGTLAQPVTIREIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTV 80 (118)
T ss_dssp CCCCCCCCCCCCCCCCCSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEE
T ss_pred CcCCccccCCCEEEEeeccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEE
Confidence 44555555555555555667777432 4577899999999999999999999999999999886 45666666666678
Q ss_pred EEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCC
Q psy12426 274 LKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIP 310 (616)
Q Consensus 274 l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p 310 (616)
|.|.++...|.|.|+|.|.|..|.....+.+.|..+|
T Consensus 81 L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 81 FFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEESSCCTTTCEEEEEEEECSSCEECCEEEEEEECCC
T ss_pred EEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEEcCC
Confidence 9999999999999999999999988888999988776
No 286
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.48 E-value=7.1e-14 Score=135.92 Aligned_cols=244 Identities=9% Similarity=-0.047 Sum_probs=144.0
Q ss_pred cCcccccEEEEeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccC
Q psy12426 135 GTLLKDSIYEQLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKV 214 (616)
Q Consensus 135 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~ 214 (616)
+.|.+.+.|++ ++..+. .......+ .......|.|.+++..|.|.|+|.|.|..|....+ ..+.+.. .
T Consensus 51 ~~p~~~v~W~k--~~~~~~--~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~---~~l~V~~--~ 118 (339)
T 3o4o_C 51 VSPRINLTWHK--NDSART--VPGEEETR---MWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMS---IELRVFE--N 118 (339)
T ss_dssp TSSCCBCCCEE--SSCCSC--CSCCSSSC---EEEETTEEEESSBCTTCCEEEECCEEETTEEEEEE---EEEEEEC--S
T ss_pred CCCCceEEEEE--CCCCcc--cCcccccc---EEeeCCeEEECCCCcccCEEEEEEEECCcceEEEE---EEEEEEc--C
Confidence 44566799998 533211 11110001 11123489999999999999999999987743211 1122221 1
Q ss_pred CCceeccCCcceEEEcCCeEEEEEE-----EeeecCceeEEEECCeeeccc-CcEEEEecCCceEEEecCCCCCCcEEEE
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDIN-----VIGEPIPTKEWLCNDITIISK-DRFKIVNDDKSTKLKVFDSKRGDSGIYT 288 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~-----~~~~p~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~l~~~~~g~y~ 288 (616)
++...........+..|+.+.|.|. +.+.|.+.+.|++++..+... .++.+.. ....|.|.++...|.|.|+
T Consensus 119 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~ 196 (339)
T 3o4o_C 119 TDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVR--GTTHLLVHDVALEDAGYYR 196 (339)
T ss_dssp CGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECT--TSSEEEESSCCGGGCEEEE
T ss_pred CCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcC--CcceEEEcccCHhhCeEEE
Confidence 1111011123357889999999999 788999999999999887654 3444332 2248999999999999999
Q ss_pred EEEEcCCCC----ceeeEEEEEecCCC--CCC---CCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCC----
Q psy12426 289 LAVKNSWGT----DKGTAKVTVLDIPS--PPE---GPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETG---- 355 (616)
Q Consensus 289 c~a~n~~g~----~~~~~~l~v~~~p~--~p~---~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~---- 355 (616)
|.|.|..|. ....+.+.+...+. +|. .+-......+..+.|.|......+...... +.|...+..
T Consensus 197 C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~--v~W~~~g~~~~~~ 274 (339)
T 3o4o_C 197 CVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTM--LWWTANDTHIESA 274 (339)
T ss_dssp EEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCE--EEEESSSSCSSSS
T ss_pred EEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCce--EEEEECCeecccc
Confidence 999998774 35566677765431 111 111122334566777776511111110121 222211110
Q ss_pred ----CEEE-----ccccc----cceEEeccccCCCe-EEEEEEEEecCcCCCC
Q psy12426 356 ----RWVP-----MGDVS----GTYTRAENLIEGHD-YNFRVKAVNKIGESLP 394 (616)
Q Consensus 356 ----~~~~-----~~~~~----~~~~~i~~L~~~~~-y~~~v~a~n~~g~~~~ 394 (616)
.... ..... ...+.|.++...+. +.|+|.|.|..|....
T Consensus 275 ~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~ 327 (339)
T 3o4o_C 275 YPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTL 327 (339)
T ss_dssp SCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECC
T ss_pred cccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEE
Confidence 0111 11111 12688899999886 9999999999997543
No 287
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.48 E-value=9.7e-14 Score=109.32 Aligned_cols=96 Identities=19% Similarity=0.223 Sum_probs=78.3
Q ss_pred CCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEE
Q psy12426 405 DPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRV 483 (616)
Q Consensus 405 ~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v 483 (616)
+....|++|.++++..++.+++.|+|.+|...++ .|.+|.|+|+..+. .|... ........++|.+|.|++.|.|+|
T Consensus 3 T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Y~~~V 80 (108)
T 2djs_A 3 SGSSGPSTVPIMHQVSATMRSITLSWPQPEQPNG-IILDYEIRYYEKEHNEFNSS-MARSQTNTARIDGLRPGMVYVVQV 80 (108)
T ss_dssp SCCCCCCCCSCCEEEEECSSEEEEECCCCSCCSS-CEEEEEEEEEETTSCSTTCE-EEEESSSEEEEESCCTTCEEEEEE
T ss_pred cCCCCCCCCcceEEEecCCCEEEEEECCCCCCCC-eEEEEEEEEEECCCCCccee-EEecCccEEEEcCCCCCCEEEEEE
Confidence 4457889999999999999999999998865444 59999999988765 33222 233567899999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCEE
Q psy12426 484 IAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 484 ~a~n~~G~g~~s~~~~~~~ 502 (616)
+|+|..|.|++|....+.|
T Consensus 81 ~A~n~~G~g~~S~~~~~~T 99 (108)
T 2djs_A 81 RARTVAGYGKFSGKMCFQT 99 (108)
T ss_dssp EEEESSCEEEECCCEEEEC
T ss_pred EEEeCCEECCCCCCEEEEe
Confidence 9999999999988665444
No 288
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.48 E-value=6.3e-14 Score=109.32 Aligned_cols=87 Identities=25% Similarity=0.310 Sum_probs=73.1
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
.+|++|..+.+. .+.+++.|.|.+ ..+++.+|.+|.|+|+..+. .|.....+++....++|.+|.|++.|+|||.|.
T Consensus 7 ~~P~pP~~~~~~-~~~~sv~L~W~p-~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~ 84 (114)
T 2kbg_A 7 REPSPPSIHGQP-SSGKSFKLSITK-QDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAA 84 (114)
T ss_dssp CCCCSCCEECCB-CSTTCEEEEECC-CCCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEE
T ss_pred CCccCCcccccc-cCCCEEEEEEEC-CCCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEE
Confidence 567777555433 688999999995 56788999999999999865 676666667778899999999999999999999
Q ss_pred cCCCCCCCCC
Q psy12426 487 NKGGPGEPSK 496 (616)
Q Consensus 487 n~~G~g~~s~ 496 (616)
|..|.|++|.
T Consensus 85 N~~G~s~pS~ 94 (114)
T 2kbg_A 85 NRLGYSEPTV 94 (114)
T ss_dssp CTTSCEEEEE
T ss_pred eCCcCcCCcC
Confidence 9999999775
No 289
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.48 E-value=1.3e-13 Score=108.91 Aligned_cols=96 Identities=19% Similarity=0.238 Sum_probs=74.8
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCC---CCc-ceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDG---GSP-ISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFR 482 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~---~~~-i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 482 (616)
.+|++|..+.+..++.++++|.|.+|..++ +.. |.+|.|+...... .|..... +..+.+++.+|.|++.|.||
T Consensus 14 ~pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~--~~~t~~~v~gL~p~t~Y~fr 91 (120)
T 1wfu_A 14 VPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYT--GYATRHVVEGLEPRTLYKFR 91 (120)
T ss_dssp CCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEE--ESCSEEEEESCCTTCEEEEE
T ss_pred CCCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEec--CCccEEEECCCCCCCEEEEE
Confidence 456666666777888999999999887665 455 8999999443333 7776543 33568999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCEEecc
Q psy12426 483 VIAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 483 v~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
|+|+|..|.|++|......|...
T Consensus 92 V~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 92 LKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCCCccEeeEcCCC
Confidence 99999999999998766555444
No 290
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.48 E-value=1.8e-13 Score=123.09 Aligned_cols=123 Identities=8% Similarity=-0.013 Sum_probs=80.2
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccc-cCCCceeccCCcceEEEcCCeEEEEEEEeeecCc--ee
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAK-KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP--TK 248 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~-~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~--~~ 248 (616)
..|.|.+++.+|.|.|+|.|.|..+..... ...+.+... ..+|.+....+.. .+..|+.+.|.|.+.+.+++ .+
T Consensus 73 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~--~~~l~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v 149 (212)
T 1q0x_L 73 AALTITGAQTEDEAIYFCALWSNNKLVFGG--GTKLTVLGQPKSSPTVTLFPPSS-EELSTAKATLVCTITDFYPGVVTV 149 (212)
T ss_dssp EEEEESSCCGGGCEEEEEEEECSSCEEECC--CEEEEECCSCCBCCEEEEECCCH-HHHTTTEEEEEEEEEEEBSSCCEE
T ss_pred EEEEECCCCccCCEEEEEEEecCchhhcCC--CeEEEEecCCCCCCeeEEeCCCH-HHccCCcEEEEEEEEEEeCCCeEE
Confidence 378999999999999999999876531111 112333222 2456654322221 23468899999999986543 89
Q ss_pred EEEECCeeecccCcEE--EEecCC----ceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 249 EWLCNDITIISKDRFK--IVNDDK----STKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 249 ~W~~~~~~~~~~~~~~--~~~~~~----~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
.|++++..+..+.... ....++ ...|.|......|.|.|+|.|.|....
T Consensus 150 ~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 150 DWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHS 204 (212)
T ss_dssp EEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEE
T ss_pred EEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcc
Confidence 9999998876442110 111111 236888888888999999999996543
No 291
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.47 E-value=2e-12 Score=116.96 Aligned_cols=128 Identities=13% Similarity=0.079 Sum_probs=81.3
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCC----CCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeee-c
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPG----EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-P 244 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~----~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p 244 (616)
...|.|.+++++|.|.|.|.+.+..|.. .... ...+.+.. ...+|.+....+.. .+..|+.+.|.|.+.+. |
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~-~~~L~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P 155 (223)
T 1dee_B 78 TLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQ-GTLVTVSSGSASAPTLFPLVSCE-NSNPSSTVAVGCLAQDFLP 155 (223)
T ss_dssp EEEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECC-CEEEEECSSCCBCCEEEEEECTT-CCCSSSEEEEEEEEEEEBS
T ss_pred EEEEEECCCCHHHCEEEEEEEeccccCcccceeecC-cEEEEEccCCCCCCEEEEecCCc-ccCCCCcEEEEEEEEEEeC
Confidence 3479999999999999999999875410 0111 11233332 23455553222121 24688999999999987 7
Q ss_pred Cc-eeEEEE-CCeeecccCcE-EEEecC---CceEEEecCCCC--CCcEEEEEEEEcCCCCcee
Q psy12426 245 IP-TKEWLC-NDITIISKDRF-KIVNDD---KSTKLKVFDSKR--GDSGIYTLAVKNSWGTDKG 300 (616)
Q Consensus 245 ~~-~~~W~~-~~~~~~~~~~~-~~~~~~---~~~~l~i~~l~~--~~~g~y~c~a~n~~g~~~~ 300 (616)
.+ .+.|++ ++..+...... .....+ ..+.|.|..... .|.|.|+|.|.|..+....
T Consensus 156 ~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~ 219 (223)
T 1dee_B 156 DSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEK 219 (223)
T ss_dssp SCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEE
T ss_pred CCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcc
Confidence 66 999999 88776430000 000111 023678877765 7889999999998876544
No 292
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.47 E-value=1.3e-13 Score=111.49 Aligned_cols=108 Identities=19% Similarity=0.275 Sum_probs=82.7
Q ss_pred cCCEEccCCCCCCC-CCCCCEEEEecCCeEEEEecCCCCC-CCCcceeEEEEEeeCCC-CceE---e-EeecCCccEEEc
Q psy12426 398 QSPITAKDPFGRPD-RPGQPTVTDWGKDHVDLEWTPPKKD-GGSPISQYIIEKKPKYG-PWEK---A-CIVPANITATSV 470 (616)
Q Consensus 398 s~~~~~~~~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~~-~~~~i~~Y~i~~~~~~~-~~~~---~-~~~~~~~~~~~l 470 (616)
+..+.+.+....|. +|.++++...+.+++.|+|.+|..+ .++.|.+|.|+|+..+. .|.. . ....++...++|
T Consensus 3 S~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 82 (122)
T 1va9_A 3 SGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTL 82 (122)
T ss_dssp CCCCSSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEE
T ss_pred CCCEEEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEe
Confidence 34445556667776 7889999999999999999988652 45579999999998775 3321 1 122345689999
Q ss_pred CCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEecc
Q psy12426 471 PDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 471 ~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
.+|.|++.|.|+|+|+|..|.|++|......|...
T Consensus 83 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 83 DNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp ESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred CCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 99999999999999999999999888765554443
No 293
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.47 E-value=1.2e-12 Score=118.33 Aligned_cols=120 Identities=13% Similarity=0.046 Sum_probs=80.2
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEec-cccCCCceeccCCcceEEEcCCeEEEEEEEee-ecC--c
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIAR-AKKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPI--P 246 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~-~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~--~ 246 (616)
...|.|.+++.+|.|.|.|.+.+.......... ..+.+. ....+|.+....+... ..|+.+.|.|.+.+ .|. +
T Consensus 80 ~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~-~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~ 156 (221)
T 3m8o_H 80 TAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQG-TLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPL 156 (221)
T ss_dssp EEEEEECSCCGGGCEEEEEEEESCTTCCCBBCC-EEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSE
T ss_pred EEEEEECCCCHHHCEEEEEEEECCChhheECCC-EEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCE
Confidence 347999999999999999999986311111111 123333 2334555532222222 68999999999998 665 4
Q ss_pred eeEEEECCeeecc----------cCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 247 TKEWLCNDITIIS----------KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 247 ~~~W~~~~~~~~~----------~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
.+.|++++..+.. +..+.+. +.|.|......|.|.|+|.|.+..+..
T Consensus 157 ~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~-----s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 157 SVTWSESGQGVTARNFPPSQDASGDLYTTS-----SQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp EEEESCCSTTCEEEECCCEECSSSSCEEEE-----EEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred EEEEEECCEECceEEcCceeeCCCCcEEEE-----EEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 8999999876521 2222221 268899999899999999999976543
No 294
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.47 E-value=1.9e-12 Score=121.51 Aligned_cols=137 Identities=13% Similarity=0.059 Sum_probs=88.6
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCC-------CCCCCCCCCCCEEecc------------ccCCCceeccCCcceEEEcC
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKG-------GPGEPSDPTAPHIARA------------KKVSPYINRDQLSDIKVRAG 231 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~-------g~~~~s~~~~~~~~~~------------~~~~P~~~~~~~~~~~v~~g 231 (616)
...|.|.+++++|+|.|.|.+.|.. +...... ...+.+.. ...+|.+ ...+. ..+.+|
T Consensus 78 ~~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~-~~~L~V~~~~~~~~~~~~~~~~~~~~v-~~~p~-~~v~~G 154 (280)
T 3fku_X 78 TAYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQ-GTLVTVSSGGGGSGGGGSGGGGIQPGL-TQPPS-VSKGLR 154 (280)
T ss_dssp EEEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECC-CCEEEECC--------------CCCSB-BCCSE-EEECTT
T ss_pred EEEEEECCCChhhCEEEEEEEecCCccccccccccEECC-CEEEEEcCCCCccCCCCCCceEeeeEE-EeCCc-EEEecC
Confidence 3479999999999999999998861 1111111 11233322 0123333 33344 889999
Q ss_pred CeEEEEEEEee-ec-CceeEEEEC--Ceeec------------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCC
Q psy12426 232 SNFEFDINVIG-EP-IPTKEWLCN--DITII------------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSW 295 (616)
Q Consensus 232 ~~~~l~c~~~~-~p-~~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~ 295 (616)
++++|.|.+.+ .+ .+.+.|++. +..+. ...++.+...+....|.|.+++.+|+|.|.|.+.|..
T Consensus 155 ~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 155 QTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp CCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred CCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 99999999998 43 478999873 22211 1356666666667789999999999999999999875
Q ss_pred CC---ceeeEEEEEecCC
Q psy12426 296 GT---DKGTAKVTVLDIP 310 (616)
Q Consensus 296 g~---~~~~~~l~v~~~p 310 (616)
+. ......|.|...|
T Consensus 235 ~~~~~~g~~t~l~V~~~~ 252 (280)
T 3fku_X 235 LSAVVFGGGTKLTVLGQP 252 (280)
T ss_dssp TTEEEEBCCCEEEEC---
T ss_pred CCceEECCCEEEEECCCC
Confidence 22 2233456665443
No 295
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.47 E-value=4e-13 Score=118.43 Aligned_cols=113 Identities=12% Similarity=-0.003 Sum_probs=74.8
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCC-eEEEEEEEeee-cCcee
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGS-NFEFDINVIGE-PIPTK 248 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~-~~~l~c~~~~~-p~~~~ 248 (616)
...|.|.+++..|.|.|+|.|.+..|.... ...+.+......|.+.... .....|. .+.|.|.+.+. |.+.+
T Consensus 69 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~---~~~L~V~~~~~~p~i~~~~---~~~~~g~~~v~L~C~~~g~~p~p~i 142 (193)
T 2if7_A 69 SYSLQLSNLKMEDTGSYRAQISTKTSAKLS---SYTLRILRQLRNIQVTNHS---QLFQNMTCELHLTCSVEDADDNVSF 142 (193)
T ss_dssp TCCEEECSCCGGGCEEEEEEEECSSCEEEE---EEEEEEECCCEEEEEEECC---C---CSSEEEEEEEEEESCCTTCEE
T ss_pred CeEEEECCCCcccCceEEEEEEecCCCeEE---EEEEEEEccCCCCeEecCc---eeecCCCceEEEEEEEecCCCceEE
Confidence 348999999999999999999988765221 1223332222224432211 1233455 89999999985 58899
Q ss_pred EEEECCeeecccCcEEEEecCCceEEEecCCCCC-CcEEEEEEEEcCCCCcee
Q psy12426 249 EWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRG-DSGIYTLAVKNSWGTDKG 300 (616)
Q Consensus 249 ~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~-~~g~y~c~a~n~~g~~~~ 300 (616)
.|++++..+..+. .|.|...... |.|.|+|.|.|..|..+.
T Consensus 143 ~W~~~g~~l~~~~-----------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~ 184 (193)
T 2if7_A 143 RWEALGNTLSSQP-----------NLTVSWDPRISSEQDYTCIAENAVSNLSF 184 (193)
T ss_dssp EEEETTEEEESSS-----------EEEEEECTTTCSCCEEEEEEEETTEEEEE
T ss_pred EEEeCCEEcCCCC-----------eEEEEeccCcCCCCcEEEEEECCCCcccc
Confidence 9999987654322 4555433343 899999999998887643
No 296
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.47 E-value=1.8e-13 Score=126.69 Aligned_cols=124 Identities=8% Similarity=-0.033 Sum_probs=79.9
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc-eeE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-TKE 249 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~~~ 249 (616)
..|.|.+++.+|.|.|+|.|.|..+... +. ...+.+.....+|.+....+.. .+..|+.+.|.|.+.+. |.+ .+.
T Consensus 109 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~-~~-~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~ 185 (252)
T 3bkj_L 109 FTLRISRVEAEDLGVYYCFQASLVPLTF-GA-GTKLELKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVK 185 (252)
T ss_dssp EEEEESSCCGGGCEEEEEEECSBSSCEE-CC-CEEEEECCCCBCCEEEEECCCH-HHHHHTEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECCCCcccCEEEEEEEEcCCccEE-CC-CEEEEEeCCCcCcEEEEeCCCh-hhcCCCcEEEEEEEeeEeCCCcEEE
Confidence 3789999999999999999988654211 11 1123333333456654322221 12368899999999985 443 799
Q ss_pred EEECCeeecccCcEE--EEe-cCC----ceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 250 WLCNDITIISKDRFK--IVN-DDK----STKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 250 W~~~~~~~~~~~~~~--~~~-~~~----~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
|++++..+....... ... .++ ...|.|..+...|.|.|+|.|.|.....
T Consensus 186 W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 186 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp EEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred EEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 999998875431111 111 111 1368899998889999999999965443
No 297
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.46 E-value=8e-14 Score=111.36 Aligned_cols=103 Identities=21% Similarity=0.274 Sum_probs=82.5
Q ss_pred cCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCC
Q psy12426 398 QSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEG 476 (616)
Q Consensus 398 s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~ 476 (616)
+..+.+.+....|++|.++++...+.+++.|+|.+|.. + .|.+|.|+|+..+. .|.... ......++|.+|.|+
T Consensus 6 S~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~--~-~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~ 80 (115)
T 1x5z_A 6 SGDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRS--D-TIANYELVYKDGEHGEEQRIT--IEPGTSYRLQGLKPN 80 (115)
T ss_dssp CCCCCCCCCSCCCCCCEEEEEECSSSSEEEEEEECCSC--C-CCCEEEECBEESSSCCCBCCE--ECSSSEEEEECCCTT
T ss_pred CCCEEEECCCCCCCCCccCEeeeCCCCEEEEEEcCCCC--C-CccEEEEEEEeCCCCCceEEe--cCCCcEEEECCCCCC
Confidence 45566667778899999999999999999999998754 2 69999999988765 443222 234689999999999
Q ss_pred CeEEEEEEEEcCCCCCCCCCCCCCEEecc
Q psy12426 477 EEYEFRVIAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 477 t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
+.|.|+|+|.|..|.|++|....+.|...
T Consensus 81 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 81 SLYYFRLAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp CEEEECEEEECSSCEEEECCCEEEECCCC
T ss_pred CeEEEEEEEECCCcccCCCcCEEEecCCC
Confidence 99999999999999999888666544443
No 298
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=2.2e-13 Score=109.44 Aligned_cols=94 Identities=32% Similarity=0.527 Sum_probs=81.0
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
.+|++|.++.+..++.+++.|+|.+|..+++.+|.+|.|+|+..+. .|..... ......+++.+|.|++.|.|||+|.
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~-~~~~~~~~v~~L~p~t~Y~frV~A~ 94 (120)
T 2yux_A 16 DRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE-HYHRTSATITELVIGNEYYFRVFSE 94 (120)
T ss_dssp CCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES-SCCSSCCEECCCCSSEEEEEEECCC
T ss_pred cCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee-cCCcCEEEECCCCCCCEEEEEEEEe
Confidence 6889999999999999999999999877777789999999998765 7876532 4557889999999999999999999
Q ss_pred cCCCCCCCCCCCCCEE
Q psy12426 487 NKGGPGEPSKASAPVT 502 (616)
Q Consensus 487 n~~G~g~~s~~~~~~~ 502 (616)
|..|.|++|..+...+
T Consensus 95 n~~G~s~~S~~s~~~~ 110 (120)
T 2yux_A 95 NMCGLSEDATMTKESA 110 (120)
T ss_dssp SSSCSCSSCEECSSCE
T ss_pred eCCcCCCCccCcCCce
Confidence 9999999998665443
No 299
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.46 E-value=1.8e-13 Score=122.87 Aligned_cols=123 Identities=15% Similarity=0.071 Sum_probs=80.2
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc-ee
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-TK 248 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~~ 248 (616)
..|.|.+++++|.|.|+|.|.|....+. ...+.+.. ...+|.+....+. ..+..|+.+.|.|.+.+. |.+ .+
T Consensus 78 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~----~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v 152 (210)
T 3d9a_H 78 YYLDLNSVTTEDTATYYCANWDGDYWGQ----GTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTV 152 (210)
T ss_dssp EEEEECSCCGGGCEEEEEEETTSSCBCC----CEEEEECCCCCBCCEEEEECCT-TSCCCSSEEEEEEEEEEEBSSCCEE
T ss_pred EEEEECCCCcccCEEEEEEEecCccccc----ceEEEeccCCCCCCEEEEecCC-cccccCCcEEEEEEEeeEecCCcEE
Confidence 3799999999999999999988531111 11233332 2345655422222 235689999999999987 887 99
Q ss_pred EEEECCeeecccCcEEEEecC---CceEEEecCCCCCCcEEEEEEEEcCCCCcee
Q psy12426 249 EWLCNDITIISKDRFKIVNDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 300 (616)
Q Consensus 249 ~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 300 (616)
.|++++..+.......+...+ ....|.|.....++ |.|+|.|.|..|....
T Consensus 153 ~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 153 TWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp EEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred EEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 999988753211000011111 12368888888766 9999999998776543
No 300
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.46 E-value=5.4e-13 Score=120.48 Aligned_cols=126 Identities=8% Similarity=-0.039 Sum_probs=81.8
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCC-CCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeee-cC--
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPG-EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PI-- 245 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~-~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~-- 245 (616)
...|.|.+++++|.|.|.|.+.+..+.. .... ...+.+.. ...+|.+.... ...+..|+.+.|.|.+.+. |.
T Consensus 78 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~-~~~L~V~~~~~~~P~v~~~~--~~~~~~g~~v~L~C~~~g~~P~~~ 154 (220)
T 2fbj_H 78 SLYLQMSKVRSEDTALYYCARLHYYGYNAYWGQ-GTLVTVSAESARNPTIYPLT--LPPALSSDPVIIGCLIHDYFPSGT 154 (220)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTTEEEEECC-CEEEEECSSCCBCCEEEEEC--CCSSSCCSSEEEEEEEEEEBSCCC
T ss_pred EEEEEECCCChhhCEEEEEEEeccccccceecC-CEEEEecCCCCCCCEEEEee--cccccCCCcEEEEEEEEeEECCCc
Confidence 3479999999999999999999875421 0111 11233332 22455553222 2234689999999999987 66
Q ss_pred ceeEEEECCeeecc-cCcEEEEecCC---ceEEEecCCCCCCcEEEEEEEEcCCCCce
Q psy12426 246 PTKEWLCNDITIIS-KDRFKIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDK 299 (616)
Q Consensus 246 ~~~~W~~~~~~~~~-~~~~~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~~~ 299 (616)
+.+.|++++..+.. ........++. .+.|.|......|.|.|+|.|.|..|...
T Consensus 155 ~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 155 MNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 79999999876421 01111111111 12588888888899999999999887654
No 301
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.46 E-value=6e-13 Score=122.18 Aligned_cols=128 Identities=11% Similarity=0.026 Sum_probs=81.8
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEee-ecCc
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPIP 246 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~~ 246 (616)
...|.|.+++.+|.|.|+|.+.+..+..........+.+.. ...+|.+....+....+..|+.+.|.|.+.+ .|.+
T Consensus 74 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 153 (240)
T 3q5y_A 74 HSEMNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDH 153 (240)
T ss_dssp CEEEEECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEEEECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCC
Confidence 44899999999999999999984322111111111233332 2355655443444444556899999999998 5555
Q ss_pred -eeEEEECCeeecccCcE----EEEecCC---ceEEEecCCCCCC-cEEEEEEEEcCCCCc
Q psy12426 247 -TKEWLCNDITIISKDRF----KIVNDDK---STKLKVFDSKRGD-SGIYTLAVKNSWGTD 298 (616)
Q Consensus 247 -~~~W~~~~~~~~~~~~~----~~~~~~~---~~~l~i~~l~~~~-~g~y~c~a~n~~g~~ 298 (616)
.+.|++++..+....+. ....++. .+.|.|......| .|.|+|.|.|.....
T Consensus 154 ~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~ 214 (240)
T 3q5y_A 154 VELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSE 214 (240)
T ss_dssp EEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred eEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 78999999987643221 1111111 1248888888777 679999999865433
No 302
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.46 E-value=1.1e-13 Score=109.82 Aligned_cols=99 Identities=26% Similarity=0.297 Sum_probs=78.5
Q ss_pred ccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEE
Q psy12426 403 AKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFR 482 (616)
Q Consensus 403 ~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 482 (616)
+.+...+|++|.++++...+.+++.|.|.+|...++ .|.+|.|+|+..+...............++|.+|.|++.|.|+
T Consensus 4 ~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 82 (111)
T 1x5l_A 4 GSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQPNG-IILEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQ 82 (111)
T ss_dssp CCCSCCCCCCCCCEECSCBCSSCEEEEECCCSCCCS-CCCEEEEEEEESSSCCSSCEEEEESSSEEEECSCCTTCEEEEC
T ss_pred EEcCCCCCCCCceEEEEEcCCCEEEEEECCCCCCCC-EEEEEEEEEEECCCCceeEEEecCCCCEEEEcCCCCCCEEEEE
Confidence 455668899999999888899999999998865444 6999999998876411112233455789999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCEE
Q psy12426 483 VIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 483 v~a~n~~G~g~~s~~~~~~~ 502 (616)
|+|.|..|.|++|....+.+
T Consensus 83 V~A~n~~G~g~~S~~~~~~T 102 (111)
T 1x5l_A 83 VRARTSAGCGRFSQAMEVET 102 (111)
T ss_dssp EEEEETTEECCCCCCEEEEC
T ss_pred EEEEeCCcCCCCcccEEEEc
Confidence 99999999999988655433
No 303
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.46 E-value=6.9e-13 Score=123.40 Aligned_cols=70 Identities=13% Similarity=0.165 Sum_probs=52.9
Q ss_pred ceEEEcCCeEEEEEEEeeecC--ceeEEEECC--ee---ec--------------ccCcEEEEe--cCCceEEEecCCCC
Q psy12426 225 DIKVRAGSNFEFDINVIGEPI--PTKEWLCND--IT---II--------------SKDRFKIVN--DDKSTKLKVFDSKR 281 (616)
Q Consensus 225 ~~~v~~g~~~~l~c~~~~~p~--~~~~W~~~~--~~---~~--------------~~~~~~~~~--~~~~~~l~i~~l~~ 281 (616)
...+.+|++++|.|.+.+.+. +.+.|+++. .. +. ...++.+.. ......|.|.+++.
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 226 (264)
T 2gjj_A 147 PEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTS 226 (264)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCc
Confidence 346889999999999998864 789999863 21 11 023444432 33457899999999
Q ss_pred CCcEEEEEEEEcC
Q psy12426 282 GDSGIYTLAVKNS 294 (616)
Q Consensus 282 ~~~g~y~c~a~n~ 294 (616)
.|+|.|.|.+.|.
T Consensus 227 ~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 227 EDSADYYCVRSGN 239 (264)
T ss_dssp GGCEEEEEEEECS
T ss_pred ccCEEEEEEEecC
Confidence 9999999999985
No 304
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=4.3e-13 Score=106.70 Aligned_cols=91 Identities=23% Similarity=0.337 Sum_probs=75.0
Q ss_pred cCCC-CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEE
Q psy12426 404 KDPF-GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFR 482 (616)
Q Consensus 404 ~~~~-~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 482 (616)
.+.. ..|++|.++++...+ +++.|+|.+|..+++ .|.+|.|+|+... .+............++|.+|.|++.|.|+
T Consensus 11 ~t~e~~~P~~P~~l~~~~~~-~sv~l~W~~P~~~ng-~i~gY~i~y~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 87 (116)
T 2edb_A 11 DLDESQVPDQPSSLHVRPQT-NCIIMSWTPPLNPNI-VVRGYIIGYGVGS-PYAETVRVDSKQRYYSIERLESSSHYVIS 87 (116)
T ss_dssp SCBCSSCCCCCSCEEEEECS-SCEEEEECCCSCTTB-CCCEEEEEEEESS-TTSEEEEEETTCCEEEECSCCSSSBEEEE
T ss_pred cCCCCCCCCCCCCeEEEECC-CEEEEEEcCCCCCCC-ceeEEEEEEEeCC-CCeEEEEeCCCeeEEEeCCCCCCCEEEEE
Confidence 3444 678999999999988 999999998876654 6999999998643 34444455677889999999999999999
Q ss_pred EEEEcCCCCCCCCCC
Q psy12426 483 VIAVNKGGPGEPSKA 497 (616)
Q Consensus 483 v~a~n~~G~g~~s~~ 497 (616)
|+|+|..|.|+++..
T Consensus 88 V~A~n~~G~g~~~~~ 102 (116)
T 2edb_A 88 LKAFNNAGEGVPLYE 102 (116)
T ss_dssp EEEEETTEECSCEEE
T ss_pred EEEEeCCccCCCCcc
Confidence 999999999987653
No 305
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=1.1e-13 Score=111.82 Aligned_cols=110 Identities=17% Similarity=0.258 Sum_probs=82.7
Q ss_pred cCCEEccCCCCCCC-CCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC----CceEeEeecCCccEEEcCC
Q psy12426 398 QSPITAKDPFGRPD-RPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG----PWEKACIVPANITATSVPD 472 (616)
Q Consensus 398 s~~~~~~~~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~----~~~~~~~~~~~~~~~~l~~ 472 (616)
+..+.+.+....|. +|.++++..++.+++.|+|.+|... ++.|.+|.|+|+..+. .|... .......++|.+
T Consensus 6 S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~~~i~~ 82 (121)
T 2dlh_A 6 SGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEP-NGQIQGYRVYYTMDPTQHVNNWMKH--NVADSQITTIGN 82 (121)
T ss_dssp CSSSCSCCCCCCCCSCCEEEEECCCSSSBCCEEEECCSCC-CSCEEEEEEECCSCTTSCTTTSCCC--CCSSCSEECCBS
T ss_pred CCCEEEECCCcCCCCCCcccEEEecCCCEEEEEECCCCCC-CCcEeEEEEEEEeCCCCCccccEEE--ecCCceEEEecC
Confidence 44555566666664 8889998888999999999988544 4469999999987654 23221 234578999999
Q ss_pred CCCCCeEEEEEEEEcCCCCCCCCCCCCCEEeccCcCCC
Q psy12426 473 LKEGEEYEFRVIAVNKGGPGEPSKASAPVTCKPRFVAP 510 (616)
Q Consensus 473 L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p 510 (616)
|.|++.|.|+|+|.|..|.|++|....+.|....+.+|
T Consensus 83 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~P 120 (121)
T 2dlh_A 83 LVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGPSS 120 (121)
T ss_dssp CCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCCSCCC
T ss_pred CCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCCCCCC
Confidence 99999999999999999999998766555544444433
No 306
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.45 E-value=1.3e-12 Score=125.37 Aligned_cols=211 Identities=10% Similarity=0.042 Sum_probs=127.2
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEe-eecCcee
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVI-GEPIPTK 248 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~-~~p~~~~ 248 (616)
...+|.|.+++.+|.|.|+|.+.+..+..... .+.+. ...+|.+.. ......+..++.+.+.|.+. +.|.+.+
T Consensus 77 ~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~----~~~l~-v~~~P~~~~-~~~~~~~~~~~~~~~~C~~~~~~P~~~i 150 (313)
T 4fqp_A 77 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSV----DIWLR-VLAKPQNTA-EVQKVQLTGEPVPMARCVSTGGRPPAQI 150 (313)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEECSSSCEEEE----EEEEC-CBBCCEEEE-EECCBCCCSSCEEEEEEEEEEEBSCCEE
T ss_pred cceEEEECcCChhhCEEEEEEEeeccCcceee----eeeee-eccCCccee-cccceEeecCceEEEEEEccCccCCcEE
Confidence 34579999999999999999986543321111 12221 233454432 23344566788888999875 7789999
Q ss_pred EEEECCeeecccCcEEEEecCC---ceEEEecCCCCCCcEEEEEEEEcCCCCceeeE--EEEEecCCCCCCCCc-cceee
Q psy12426 249 EWLCNDITIISKDRFKIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA--KVTVLDIPSPPEGPL-KPSNI 322 (616)
Q Consensus 249 ~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~--~l~v~~~p~~p~~~~-~~~~~ 322 (616)
.|++++..+...........+. .+.|.|......|.|.|+|.|.|..+...... .+.+..+|.....+. .....
T Consensus 151 ~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~ 230 (313)
T 4fqp_A 151 TWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYL 230 (313)
T ss_dssp EEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEET
T ss_pred EeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeec
Confidence 9999988765433222222221 23688999999999999999999777654433 344444443211111 12233
Q ss_pred cCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 323 TKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 323 ~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
.+..+.|.|...+.. .+ ..+ .|...+.. ...........+.|.++...+.+.|+|.|.|..|..
T Consensus 231 ~g~~v~l~C~~~g~P--~p-~~v--~W~~~~~~-l~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 294 (313)
T 4fqp_A 231 GQNEATLTCDARSNP--EP-TGY--NWSTTMGP-LPPFAVAQGAQLLIRPVDKPINTTLICNVTNALGAR 294 (313)
T ss_dssp TCCCEEEEEEEEEES--CC-CEE--EEEETTBS-CCTTEEEETTEEEECCCSSCCEEEEEEEEECSSCEE
T ss_pred CCCeEEEEEEecCCC--CC-cEE--EEEECCEE-CCCceEEeCCEEEECcCChhhCEEEEEEEEeCCCcE
Confidence 456788888753221 11 122 22222111 000001223578999999999999999999999864
No 307
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.44 E-value=2.8e-13 Score=121.10 Aligned_cols=120 Identities=15% Similarity=0.067 Sum_probs=71.5
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEe-ccccCCCceeccCCcceEEEcCCeEEEEEEEeee-cC-ceeE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA-RAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PI-PTKE 249 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~-~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~-~~~~ 249 (616)
.|.|.+++.+|.|.|+|.|.|..|..... ..+.. .....+|.+........ ...|+.+.|.|.+.+. |. +.+.
T Consensus 69 ~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~---~~v~~~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~ 144 (207)
T 2vol_A 69 ELPIMHQDWLNGKEFKCRVNSAAFPAPIE---KTISKTKGRPKAPQVYTLPPPKE-QMAKDKVSLTCMITDFFPEDITVE 144 (207)
T ss_dssp EEECCHHHHHTTCCEEEEEECTTCSSCEE---EEECCCCCCCBCCEEEEECCCTG-GGSSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEehhHcCCCCEEEEEEEccCCCCceE---EEeccCCCCCcCCeEEEeCCCHH-HhcCCceEEEEEEeeEECCCCEEE
Confidence 57788888888888888888876642110 01111 02234565542222211 1258899999999985 44 3899
Q ss_pred EEECCeeecccCcE--EEEecCC---ceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 250 WLCNDITIISKDRF--KIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 250 W~~~~~~~~~~~~~--~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
|++++..+...... ....++. .+.|.|......+.|.|+|.|.|...
T Consensus 145 W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 145 WESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp EEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred EEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 99999976432211 1111111 12345555545578999999999654
No 308
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.44 E-value=6e-14 Score=128.28 Aligned_cols=121 Identities=7% Similarity=-0.038 Sum_probs=68.8
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc--eeEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP--TKEW 250 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~--~~~W 250 (616)
.|.|.+++.+|.|.|+|.|.|..+...... ..+.+.....+|.+....+... +..|+.+.|.|.+.+.+++ .+.|
T Consensus 94 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~--~~l~V~~~~~~p~v~~~~~~~~-~~~g~~v~L~C~~~g~~p~~~~v~W 170 (233)
T 3bqu_C 94 VFTIENMLSEDVADYYCLQSDNLPYTFGGG--TNLEIKRADAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVKW 170 (233)
T ss_dssp EEC-----CCCCSEEEEEECSSSSCCBCCC--CBC---CCCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCEEEEE
T ss_pred EEEECCCCHHHCEEEEEEEecCCceeecCC--EEEEEeCCCCCCEEEEeCCCHH-hhcCCceEEEEEEccccCCceEEEE
Confidence 689999999999999999988765322111 1233333334566543222221 2368999999999986443 7999
Q ss_pred EECCeeecccCcEE--EEec-CC----ceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 251 LCNDITIISKDRFK--IVND-DK----STKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 251 ~~~~~~~~~~~~~~--~~~~-~~----~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
++++..+..+.... .... ++ ...|.|......|.|.|+|.|.|...
T Consensus 171 ~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 171 KIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred EECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 99998765431111 1111 11 23688888888899999999999643
No 309
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.44 E-value=8.7e-13 Score=123.24 Aligned_cols=122 Identities=15% Similarity=0.108 Sum_probs=75.6
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecccc----CCCc-------------eeccCCcceEEEcCCeEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKK----VSPY-------------INRDQLSDIKVRAGSNFE 235 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~----~~P~-------------~~~~~~~~~~v~~g~~~~ 235 (616)
.|.|.+++++|.|.|.|.+.|..+........+.+...... .+|. +....+....+.+|++++
T Consensus 91 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~ 170 (268)
T 1x9q_A 91 TLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMK 170 (268)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEE
T ss_pred EEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEE
Confidence 68888888888888888887764321111111112211110 1121 112223467889999999
Q ss_pred EEEEEeeecC--ceeEEEECC--eee-------------------cccCcEEEEec--CCceEEEecCCCCCCcEEEEEE
Q psy12426 236 FDINVIGEPI--PTKEWLCND--ITI-------------------ISKDRFKIVND--DKSTKLKVFDSKRGDSGIYTLA 290 (616)
Q Consensus 236 l~c~~~~~p~--~~~~W~~~~--~~~-------------------~~~~~~~~~~~--~~~~~l~i~~l~~~~~g~y~c~ 290 (616)
|.|.+.+.+. +.+.|++.. ..+ ....++.+... .....|.|.+++.+|+|.|.|.
T Consensus 171 L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 250 (268)
T 1x9q_A 171 LSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCT 250 (268)
T ss_dssp EEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEE
Confidence 9999998763 789999852 211 01245555432 2346899999999999999999
Q ss_pred EEcC
Q psy12426 291 VKNS 294 (616)
Q Consensus 291 a~n~ 294 (616)
+.+.
T Consensus 251 a~~~ 254 (268)
T 1x9q_A 251 GASY 254 (268)
T ss_dssp EEET
T ss_pred EccC
Confidence 9874
No 310
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=99.44 E-value=2e-12 Score=100.15 Aligned_cols=88 Identities=18% Similarity=0.257 Sum_probs=73.8
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
..|++|.++++..++.+++.|+|.+|... ++.+.+|.|+|+..+. .+.....++.+..+++|.+|.|++.|.|+|+|.
T Consensus 6 t~~~~P~~l~v~~~t~~Sv~lsW~~p~~~-~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 6 SVSSVPTKLEVVDATPTSLKISWDAYYSS-WQNVKYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAY 84 (103)
T ss_dssp CCCCCCCSCEEEEEETTEEEEECTTTTTT-SCCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEE
T ss_pred ccCCCCceeEEEecCCCEEEEEccCCCCC-CCccceEEEEEEECCCCCccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 56889999999999999999999987654 4469999999998754 344445566778999999999999999999999
Q ss_pred cC--CCCCCCCCC
Q psy12426 487 NK--GGPGEPSKA 497 (616)
Q Consensus 487 n~--~G~g~~s~~ 497 (616)
|. .|.|+ |.+
T Consensus 85 ~~~~~G~~~-S~p 96 (103)
T 3t04_D 85 DTFFPGYEP-NSP 96 (103)
T ss_dssp SCCCTTCCC-SCC
T ss_pred eCCCCCCCC-CCC
Confidence 99 88887 543
No 311
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.44 E-value=5.4e-13 Score=120.67 Aligned_cols=122 Identities=13% Similarity=0.060 Sum_probs=80.7
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCC-CCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc-e
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPG-EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-T 247 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~-~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~ 247 (616)
..|.|.+++.+|.|.|.|.+.|..+.. .... ...+.+.. ...+|.+....+. ..+..|+.+.|.|.+.+. |.+ .
T Consensus 81 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~-~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~ 158 (220)
T 1pz5_B 81 VYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQ-GTSVTVSSATTTAPSVYPLVPG-CSDTSGSSVTLGCLVKGYFPEPVT 158 (220)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSSEEEECC-CEEEEECSSCCBCCEEEEECCC-SCCSCSSSEEEEEEEEEEBSSCCE
T ss_pred EEEEEccCCHHHCEEEEEEEecCCcccceECC-CEEEEEccCCCCCCeEEEcccc-cccCCCCcEEEEEEEEEEeCCCeE
Confidence 379999999999999999999875321 1111 11233332 2245655322222 235689999999999998 888 9
Q ss_pred eEEEECCeee----cc----cCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceee
Q psy12426 248 KEWLCNDITI----IS----KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 301 (616)
Q Consensus 248 ~~W~~~~~~~----~~----~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~ 301 (616)
+.|++++... .. ...+.. ...|.|.+...++ |.|+|.|.|..|....+
T Consensus 159 v~W~~~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 214 (220)
T 1pz5_B 159 VKWNYGALSSGVRTVSSVLQSGFYSL-----SSLVTVPSSTWPS-QTVICNVAHPASKVDLI 214 (220)
T ss_dssp EEEGGGTCCTTEEECCCEEETTEEEE-----EEEEEECGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred EEEecCCcccceEEcCCcccCCeEEE-----EEEEEEcchhcCC-ceEEEEEEECCccEeee
Confidence 9999987631 00 011111 2478888888766 99999999988865444
No 312
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.44 E-value=1.2e-13 Score=124.62 Aligned_cols=121 Identities=17% Similarity=0.114 Sum_probs=70.4
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEe-ccccCCCceeccCCcceEEEcCCeEEEEEEEee-ecCc-eeE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA-RAKKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPIP-TKE 249 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~-~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~~-~~~ 249 (616)
.|.|.+++.+|.|.|+|.|.|..+..... ..+.. .....+|.+....+.... ..|+.+.|.|.+.| .|.+ .+.
T Consensus 77 ~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~---~~v~~~~~~~~~P~v~~~~~~~~~-~~g~~~~L~C~~~g~~P~~~~v~ 152 (218)
T 2rgs_A 77 TLPIQHQDWMSGKEFKCKVNNKDLPSPIE---RTISKIKGLVRAPQVYILPPPAEQ-LSRKDVSLTCLVVGFNPGDISVE 152 (218)
T ss_dssp EEECCHHHHHTTCCEEEEEEETTCSSCEE---EEECCCCCCCBCCEEEEECCCGGG-TTSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEcHHHcCCCCeEEEEEECCcCCCcce---EEEeecCCCCCCCEEEEECCChHH-hcCCceEEEEEEEeeeCCCcEEE
Confidence 57778888888888888888875532100 00110 122345655432222211 25899999999998 5665 999
Q ss_pred EEECCeeecccCcEEEE-ecCCc----eEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 250 WLCNDITIISKDRFKIV-NDDKS----TKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 250 W~~~~~~~~~~~~~~~~-~~~~~----~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
|++++..+......... ..++. ..|.|......|.|.|+|.|.|....
T Consensus 153 W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 153 WTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred EEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 99999887432211111 11111 12344433334589999999997543
No 313
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.44 E-value=5.7e-13 Score=107.24 Aligned_cols=95 Identities=23% Similarity=0.290 Sum_probs=75.9
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCC-CC-----Cc--ceeEEEEEeeCCC--CceEeEeecCCccEEEcCCCCCCC
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKD-GG-----SP--ISQYIIEKKPKYG--PWEKACIVPANITATSVPDLKEGE 477 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~-~~-----~~--i~~Y~i~~~~~~~--~~~~~~~~~~~~~~~~l~~L~p~t 477 (616)
..|+....+++..++.+++.|+|.+|..+ ++ +. +..|.|.|+..+. .+.. ...+....++|.+|.|++
T Consensus 16 ~~~s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~--~~~g~~ts~~v~~L~P~T 93 (137)
T 1wk0_A 16 ALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKS--VYVGEETNITLNDLKPAM 93 (137)
T ss_dssp HHTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEE--EEEESCSEEEECSCCTTC
T ss_pred hccCCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEE--EEecCccEEEEcCCCCCC
Confidence 34666778889999999999999988764 33 22 6899999977654 3333 334668899999999999
Q ss_pred eEEEEEEEEcCCCCCCCCCCCCCEEec
Q psy12426 478 EYEFRVIAVNKGGPGEPSKASAPVTCK 504 (616)
Q Consensus 478 ~Y~~~v~a~n~~G~g~~s~~~~~~~~~ 504 (616)
.|.|||+|+|..|.|++|....+.|..
T Consensus 94 ~Y~~rV~A~n~~G~G~~S~~~~f~T~~ 120 (137)
T 1wk0_A 94 DYHAKVQAEYNSIKGTPSEAEIFTTLS 120 (137)
T ss_dssp EECEEEEEEETTEECCCCCCCCEECCC
T ss_pred EEEEEEEEEeCCCcCCCCCCEEEECCC
Confidence 999999999999999999988775543
No 314
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.43 E-value=3.9e-13 Score=105.79 Aligned_cols=95 Identities=25% Similarity=0.322 Sum_probs=76.6
Q ss_pred CCCCCCCCCCEEEE--ecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEE
Q psy12426 407 FGRPDRPGQPTVTD--WGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRV 483 (616)
Q Consensus 407 ~~~p~~p~~~~~~~--~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v 483 (616)
...|++|.++++.. .+.+++.|+|.+|.. .++.|.+|.|+|+..+. .|.... .....++|.+|.|++.|.|+|
T Consensus 5 ~~~P~~P~~l~~~~~~~~~~sv~l~W~~p~~-~~g~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~l~~L~p~t~Y~~~V 80 (108)
T 2dm4_A 5 SSGPDAPRNLQLSLPREAEGVIVGHWAPPIH-THGLIREYIVEYSRSGSKMWASQR---AASNFTEIKNLLVNTLYTVRV 80 (108)
T ss_dssp CCCTTSCEEEEEECCTTCSSCEEEEEECCSC-CSSCEEEEEEEEEETTCSCCEEEE---ESSSEEEECSCCSSCEEEEEE
T ss_pred CCCCcCCcCeEEEEeccCCCEEEEEEcCCCC-CCCcEEEEEEEEEECCCCCeEEec---CCccEEEeCCCCCCCEEEEEE
Confidence 35788898988766 578999999998864 45579999999998776 676542 235699999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCEEecc
Q psy12426 484 IAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 484 ~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
+|+|..|.|++|......|...
T Consensus 81 ~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2dm4_A 81 AAVTSRGIGNWSDSKSITTIKG 102 (108)
T ss_dssp EEEESSCEEEECCCEEEECCSC
T ss_pred EEECCCceeCCCCCEEEECCCC
Confidence 9999999999988665544433
No 315
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.43 E-value=1.1e-12 Score=115.98 Aligned_cols=171 Identities=20% Similarity=0.248 Sum_probs=119.0
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccC--cEEEEecCCceEEEecCCCCCCcEEEEEEEE
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD--RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
+|.|. ..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ++.+...+....|.|.++...|.|.|+|.+.
T Consensus 5 ~P~~~-~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 5 APTFT-QPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeEE-ccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 45553 34567889999999999999999999999999998876543 5555555667799999999999999999999
Q ss_pred cCCCCceeeEEEEEecCCCCCC---CCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCC-----CCCEEEccccc
Q psy12426 293 NSWGTDKGTAKVTVLDIPSPPE---GPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDME-----TGRWVPMGDVS 364 (616)
Q Consensus 293 n~~g~~~~~~~l~v~~~p~~p~---~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~-----~~~~~~~~~~~ 364 (616)
|..|.......+.+...+.+|. .+.......+..+.|.|...... ... +.|...+ ...........
T Consensus 84 n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p----~~~--v~W~~~~~~~~~~~~~~~~~~~~ 157 (194)
T 2a38_A 84 NGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIP----TPV--VKFYRDGAEIQSSLDFQISQEGD 157 (194)
T ss_dssp ETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEES----CCE--EEEEETTEECCCSSSEEEEEETT
T ss_pred cCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEec----CCe--EEEEECCEECCCCCcEEEEEcCC
Confidence 9988877777787775333322 11123344566788888753221 111 2222211 11122112223
Q ss_pred cceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 365 GTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 365 ~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
...+.|.++...+.+.|+|.|.|..|..
T Consensus 158 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 185 (194)
T 2a38_A 158 LYSLLIAEAYPEDSGTYSVNATNSVGRA 185 (194)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEETTEEE
T ss_pred EEEEEECCCChhcCeEEEEEEEeCCCce
Confidence 3468888999999999999999998864
No 316
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.43 E-value=8.3e-13 Score=105.74 Aligned_cols=98 Identities=34% Similarity=0.508 Sum_probs=81.8
Q ss_pred CCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEeecCCccEEEcCCCCCCCeEEEEE
Q psy12426 406 PFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACIVPANITATSVPDLKEGEEYEFRV 483 (616)
Q Consensus 406 ~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v 483 (616)
....|.+|.++.+...+.+++.|.|.+|. +++.++.+|.|+|+..+. .|..... ......+++.+|.|++.|.|||
T Consensus 12 ~~~~P~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~frV 89 (117)
T 1uem_A 12 LSDLPGPPSKPQVTDVTKNSVTLSWQPGT-PGTLPASAYIIEAFSQSVSNSWQTVAN-HVKTTLYTVRGLRPNTIYLFMV 89 (117)
T ss_dssp SCCSCBCCCCCEEEEECSSCEEEECCCCB-CSSSCCCEEEEEEEETTTEEEEEEEEE-EECSSEEEECSCCTTCEEEEEE
T ss_pred CCCCccCCCCCEEEEecCCEEEEEEeCCC-CCCcCceEEEEEEEECCCCCceeEccc-ccCcCEEEECCCCCCCEEEEEE
Confidence 35788999999999999999999999876 566679999999988753 6665432 3357799999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCEEecc
Q psy12426 484 IAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 484 ~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
+|+|..|.|++|..+..+++.+
T Consensus 90 ~A~n~~G~s~~S~~~~~v~t~~ 111 (117)
T 1uem_A 90 RAINPQGLSDPSPMSDPVRTQD 111 (117)
T ss_dssp EEEETTEEEEECCCCCCEECCC
T ss_pred EEECCCccCCCcCCCccEEccC
Confidence 9999999999999888666554
No 317
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=3.3e-13 Score=109.09 Aligned_cols=104 Identities=23% Similarity=0.254 Sum_probs=79.2
Q ss_pred cCCEEccCCCCCCC-CCCCCEEE-EecCCeEEEEecCCC-CCCCCcceeEEEEEeeCCC----CceEeEeecCCccEEEc
Q psy12426 398 QSPITAKDPFGRPD-RPGQPTVT-DWGKDHVDLEWTPPK-KDGGSPISQYIIEKKPKYG----PWEKACIVPANITATSV 470 (616)
Q Consensus 398 s~~~~~~~~~~~p~-~p~~~~~~-~~~~~~v~l~W~~p~-~~~~~~i~~Y~i~~~~~~~----~~~~~~~~~~~~~~~~l 470 (616)
+..+.+.+....|. +|.++++. ..+.+++.|+|.+|. ...++.|.+|+|+|+..+. .|.. ........++|
T Consensus 6 S~~v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~~~l 83 (124)
T 2dbj_A 6 SGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLE--EVGQNGSRARI 83 (124)
T ss_dssp CCCCCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEE--EEESTTSCEEE
T ss_pred CCCEEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEE--EeCCCcceEEe
Confidence 45566677777776 77788887 578999999999884 2334479999999974322 3322 23456789999
Q ss_pred CCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEe
Q psy12426 471 PDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTC 503 (616)
Q Consensus 471 ~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~ 503 (616)
.+|.|++.|.|+|+|+|..|.|++|......+.
T Consensus 84 ~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~ 116 (124)
T 2dbj_A 84 SVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIP 116 (124)
T ss_dssp ECCCSSSEEEECEEEEESSCBCCCCCCEEEECC
T ss_pred cCCCCCCEEEEEEEEECCCccCCCCCCEEEEcC
Confidence 999999999999999999999999886555443
No 318
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.43 E-value=7.2e-13 Score=120.17 Aligned_cols=124 Identities=13% Similarity=0.022 Sum_probs=78.5
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCC----C--CCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeee
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGP----G--EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE 243 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~----~--~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~ 243 (616)
...|.|.+++.+|.|.|.|.+.|..|. . .... ...+.+.. ...+|.+....+.. .+..|+.+.|.|.+.+.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~-~~~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~ 155 (225)
T 1op3_H 78 FVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGP-GTVVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDY 155 (225)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECC-CEEEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEE
T ss_pred EEEEEECCCChhhCEEEEEEEecCCCccccccceeecC-CEEEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeE
Confidence 347999999999999999999987651 0 0111 11233332 22345553322222 24679999999999987
Q ss_pred -cCc-eeEEEECCeeeccc-CcEEEEecCC---ceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 244 -PIP-TKEWLCNDITIISK-DRFKIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 244 -p~~-~~~W~~~~~~~~~~-~~~~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
|.+ .+.|++++..+... .......++. ...|.|.+....| |.|+|.|.|..+.
T Consensus 156 ~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 214 (225)
T 1op3_H 156 FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 214 (225)
T ss_dssp BSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGT
T ss_pred ECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCC
Confidence 766 99999988653211 0001111111 2368898888888 9999999995443
No 319
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.43 E-value=1.2e-12 Score=126.71 Aligned_cols=207 Identities=10% Similarity=0.022 Sum_probs=129.7
Q ss_pred CCCCeEEeecccCCCeEEEEEE-EEeCCCCCCCCCCCCCEEeccccCCCcee-ccCCcceEEEcC---CeEEEEEE-Eee
Q psy12426 169 GDTPKGKVLDLIEGNQYEFRVL-AVNKGGPGEPSDPTAPHIARAKKVSPYIN-RDQLSDIKVRAG---SNFEFDIN-VIG 242 (616)
Q Consensus 169 ~~~~~l~i~~l~~~~~~~y~c~-a~n~~g~~~~s~~~~~~~~~~~~~~P~~~-~~~~~~~~v~~g---~~~~l~c~-~~~ 242 (616)
.....|.|.+++..|.|.|+|. +.+..|..... ..+.+ ..+|.+. ......+.+..| +.+.|.|. +.+
T Consensus 89 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~---~~l~V---~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~ 162 (331)
T 3u83_A 89 FTDGTIRLSRLELEDEGVYICEFATFPTGNRESQ---LNLTV---MAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANG 162 (331)
T ss_dssp SSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEE---EEEEE---EBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEE
T ss_pred CCCceEEEcccCcccCcEEEEEEEecCCCccEEE---EEEEE---ecCCcceeecCCCceeecCCCccceEEEEEEecCC
Confidence 3456799999999999999998 45544432111 11222 2344442 234566778888 77999997 889
Q ss_pred ecCceeEEEECCeeec-------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCC
Q psy12426 243 EPIPTKEWLCNDITII-------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEG 315 (616)
Q Consensus 243 ~p~~~~~W~~~~~~~~-------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~ 315 (616)
.|.+.+.|++++.... ....+.+ ...|.|..+...|.|.|+|.|.|..|.....+.+.+..+|.....
T Consensus 163 ~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~ 237 (331)
T 3u83_A 163 KPPSVVSWETRLKGEAEYQEIRNPNGTVTV-----ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIE 237 (331)
T ss_dssp BSCCEEEEEESSCCEEEEEEEECTTSCEEE-----EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEE
T ss_pred cCCceEEEEcCCCCccccceeECCCCcEEE-----EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEe
Confidence 9999999999633211 1111111 136889999999999999999999888777777777655532211
Q ss_pred Cc-cceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEec-cccCCCeEEEEEEEEecCcCC
Q psy12426 316 PL-KPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAE-NLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 316 ~~-~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~-~L~~~~~y~~~v~a~n~~g~~ 392 (616)
+. ......+..+.|.|....... + . .+.|...+... ..........+.|. ++...+.+.|+|.|.|..|..
T Consensus 238 ~~~~~~~~~g~~~~l~C~~~g~p~--p-~--~i~W~~~~~~~-~~~~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~ 310 (331)
T 3u83_A 238 GFDGNWYLQRMDVKLTCKADANPP--A-T--EYHWTTLNGSL-PKGVEAQNRTLFFKGPINYSLAGTYICEATNPIGTR 310 (331)
T ss_dssp CCCSCCBTTCCCEEEEEEEEEESC--C-C--EEEEEETTBSC-CTTEEEETTEEEECSCCCGGGCEEEEEEEEETTEEE
T ss_pred cCCCceEeCCCeEEEEEeCcCCCC--C-C--EEEEEECCCcc-cccceecCcEEEEeCCCccccCeEEEEEEEeccccc
Confidence 11 112234677888887532211 1 1 12222211110 00001123568888 899999999999999999875
No 320
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.43 E-value=6.4e-13 Score=105.59 Aligned_cols=96 Identities=20% Similarity=0.240 Sum_probs=75.8
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCC-CCCCcceeEEEEEeeCCCC---ceEeEeecCCccEEEcCCCCCCCeEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKK-DGGSPISQYIIEKKPKYGP---WEKACIVPANITATSVPDLKEGEEYEFRV 483 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~-~~~~~i~~Y~i~~~~~~~~---~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v 483 (616)
.+|.+|.++.+..++.+++.|+|.+|.. ..++.|.+|.|+|+..+.. +.....+.+....++|.+|.|++.|.|+|
T Consensus 7 ~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 86 (114)
T 1x4y_A 7 GPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKM 86 (114)
T ss_dssp SCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEEEE
Confidence 4567788889999999999999998862 4556799999999876542 22223444566889999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCEEe
Q psy12426 484 IAVNKGGPGEPSKASAPVTC 503 (616)
Q Consensus 484 ~a~n~~G~g~~s~~~~~~~~ 503 (616)
+|+|..|.|++|....+.|.
T Consensus 87 ~A~n~~G~g~~S~~v~~~T~ 106 (114)
T 1x4y_A 87 QCFNEGGESEFSNVMICETK 106 (114)
T ss_dssp EEECTTCCCCCCCCEEEECC
T ss_pred EEEcCCccCCCcCCEEEEeC
Confidence 99999999999886554443
No 321
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.42 E-value=7.9e-12 Score=113.75 Aligned_cols=133 Identities=11% Similarity=0.063 Sum_probs=79.5
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCC--CC--CCCCCCCCEEecc-ccCCCceeccCCcceEEEcC-CeEEEEEEEeee-
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGG--PG--EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAG-SNFEFDINVIGE- 243 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g--~~--~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g-~~~~l~c~~~~~- 243 (616)
...|.|.+++++|.|.|.|.+.+..+ .. .... ...+.+.. ...+|.+....+.. .+..| +.+.|.|.+.+.
T Consensus 77 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~-~~~L~V~~~~~~~P~v~~~~p~~-~~~~g~~~v~L~C~~~g~~ 154 (232)
T 1dn0_B 77 QFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQ-GTLVTVSSGSASAPTLFPLVSCE-NSPSDTSSVAVGCLAQDFL 154 (232)
T ss_dssp EEEEEECSCCGGGCEEEEEEECSSTTSCSCCSEECC-CEEEEECSSCCBCCEEEEEECC-------CCSEEEEEEEEEEB
T ss_pred EEEEEECCCCcccCEEEEEEEecCCcCCchhhhccc-ceEEEEccCCCCCCceEEecccc-ccCCCCCcEEEEEEEEEEe
Confidence 34799999999999999999984222 11 0111 11233332 23446553222222 24467 899999999986
Q ss_pred cCc-eeEEEE-CCeeecccCcE-EEEecCC---ceEEEecCCCC--CCcEEEEEEEEcCCCCceeeEEEE
Q psy12426 244 PIP-TKEWLC-NDITIISKDRF-KIVNDDK---STKLKVFDSKR--GDSGIYTLAVKNSWGTDKGTAKVT 305 (616)
Q Consensus 244 p~~-~~~W~~-~~~~~~~~~~~-~~~~~~~---~~~l~i~~l~~--~~~g~y~c~a~n~~g~~~~~~~l~ 305 (616)
|.+ .+.|++ ++..+...... .....+. .+.|.|..... .|.|.|+|.|.|..+.......+.
T Consensus 155 P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~ 224 (232)
T 1dn0_B 155 PDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLP 224 (232)
T ss_dssp SSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECC
T ss_pred CCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecC
Confidence 776 999999 88776430000 0001111 23688888876 789999999999888765554443
No 322
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.42 E-value=3.6e-13 Score=115.86 Aligned_cols=107 Identities=8% Similarity=-0.029 Sum_probs=73.8
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWL 251 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~ 251 (616)
.+|.|.+++..|+|.|+|.|.|..|. ....+.+......|.+.... . ...|.|.+.+.|.+.+.|+
T Consensus 60 ~sL~I~~v~~~DsG~Y~C~~~n~~~~-----~~~~L~V~~~~~~p~i~~~~--------~-~~~L~C~~~~~p~p~i~W~ 125 (171)
T 1ccz_A 60 GSLTIYNLTSSDEDEYEMESPNITDT-----MKFFLYVLEMVSKPMIYWEC--------S-NATLTCEVLEGTDVELKLY 125 (171)
T ss_dssp CCEEECSCCGGGCEEEEEECTTCCSC-----EEEEEEEECCCCCCEEEEET--------T-TTEEEEECSSCSSCEEEEE
T ss_pred CeEEECCCChhhCceEEEEEeCCCCc-----EEEEEEEECcCCCCEEEEec--------C-CcEEEEEeCCCCCcEEEEE
Confidence 47999999999999999999887661 11223333333344442211 1 1379999999999999999
Q ss_pred ECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEE
Q psy12426 252 CNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAK 303 (616)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~ 303 (616)
+++..+...... .+.+.+ .++.|.|+|.|.|..|.....+.
T Consensus 126 ~~~~~l~~~~~~---------~l~~~~--~~~~g~Y~C~a~N~~~~~~~~~~ 166 (171)
T 1ccz_A 126 QGKEHLRSLRQK---------TMSYQW--TNLRAPFKCKAVNRVSQESEMEV 166 (171)
T ss_dssp ETTEEEEEESSS---------EEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred ECCEECcCCcce---------EEEEec--cCCCceEEEEEEcccCcccceeE
Confidence 999877533222 333433 56889999999999887655443
No 323
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.42 E-value=2e-12 Score=119.47 Aligned_cols=129 Identities=16% Similarity=0.091 Sum_probs=81.9
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCC--CCCCCCCCCEEec-cccCCCceeccCCcceEEEcCCeEEEEEEEee-ecCc
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGP--GEPSDPTAPHIAR-AKKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPIP 246 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~--~~~s~~~~~~~~~-~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~~ 246 (616)
...|.|.+++.+|+|.|.|.+.+.... .... ....+.+. ....+|.+.... ....+..|+.+.|.|.+.+ .|.+
T Consensus 78 ~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~-~~~~l~V~~~~~~~P~i~~~~-~~~~~~~g~~v~L~C~~~g~~P~~ 155 (253)
T 3liz_H 78 TLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWG-QGTLVTVSAAKTTPPSVYPLA-PGSAAQTNSMVTLGCLVKGYFPEP 155 (253)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCBTTTBCCEEC-CCEEEEECSSCCBCCEEEEEC-C------CCEEEEEEEEEEEBSSC
T ss_pred EEEEEECCCChhhCEEEEEEEecCCcceeeEEC-CCEEEEEeccCCCCCeEEEec-CCcccCCCCcEEEEEEEeeEeCCC
Confidence 347999999999999999999875211 0011 11123333 334556553222 2234557999999999998 6666
Q ss_pred -eeEEEECCeeec--------ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy12426 247 -TKEWLCNDITII--------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 307 (616)
Q Consensus 247 -~~~W~~~~~~~~--------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 307 (616)
.+.|++++..+. ....+.+. +.|.|......| |.|+|.+.|..+.......+.+.
T Consensus 156 ~~v~W~~~~~~~~~~~~~~~~~~g~~~~~-----s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 156 VTVTWNSGSLSSGVHTFPAVLQSDLYTLS-----SSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp CEEEEGGGTBCTTEEECCCEEETTEEEEE-----EEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred eEEEEEeCCeecceEeCCccccCCeEEEE-----EEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 899999886321 11222221 378899999889 99999999987766655555444
No 324
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.42 E-value=5.5e-13 Score=108.27 Aligned_cols=105 Identities=20% Similarity=0.183 Sum_probs=81.5
Q ss_pred CCEEccCCCCCC-CCCCCCEEEEecCCeEEEEecCCCC-CCCCcceeEEEEEeeCCC-C---ce----EeEeecCCccEE
Q psy12426 399 SPITAKDPFGRP-DRPGQPTVTDWGKDHVDLEWTPPKK-DGGSPISQYIIEKKPKYG-P---WE----KACIVPANITAT 468 (616)
Q Consensus 399 ~~~~~~~~~~~p-~~p~~~~~~~~~~~~v~l~W~~p~~-~~~~~i~~Y~i~~~~~~~-~---~~----~~~~~~~~~~~~ 468 (616)
..+.+.+....| .+|.++++..++.+++.|+|.+|.. ..++.|.+|.|+|+..+. . |. ...........+
T Consensus 3 ~~v~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (125)
T 1uen_A 3 SGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHG 82 (125)
T ss_dssp CCCCCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEE
T ss_pred ccEEEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccEE
Confidence 345556666667 6888999999999999999998742 234469999999987764 2 21 233445678899
Q ss_pred EcCCCCCCCeEEEEEEEEcCCCCCCCCCCCCCEEe
Q psy12426 469 SVPDLKEGEEYEFRVIAVNKGGPGEPSKASAPVTC 503 (616)
Q Consensus 469 ~l~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~~~ 503 (616)
+|.+|.|++.|.|+|+|+|..|.|++|....+.|.
T Consensus 83 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 117 (125)
T 1uen_A 83 MLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP 117 (125)
T ss_dssp EEESCCSSCEEEEEEEEEESSCEEEECCCEEEECC
T ss_pred EeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECC
Confidence 99999999999999999999999998876554443
No 325
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.41 E-value=3.8e-12 Score=114.32 Aligned_cols=169 Identities=18% Similarity=0.265 Sum_probs=120.4
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeec-ccCcEEEEec-CCceEEEecCCCC-CCcEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITII-SKDRFKIVND-DKSTKLKVFDSKR-GDSGIYTLA 290 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~-~~~~~~~~~~-~~~~~l~i~~l~~-~~~g~y~c~ 290 (616)
.+|.|. ..+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+... ++...|.|.++.. .|.|.|+|.
T Consensus 5 ~pP~~~-~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 5 HPPEII-RKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp CCCEEE-ECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCEEE-cCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 467664 44677889999999999999999999999999999886 4556665443 4447999999999 999999999
Q ss_pred EEcCCCC-ceeeEEEEEecCCCCCCC-------CccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCC------CCC
Q psy12426 291 VKNSWGT-DKGTAKVTVLDIPSPPEG-------PLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDME------TGR 356 (616)
Q Consensus 291 a~n~~g~-~~~~~~l~v~~~p~~p~~-------~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~------~~~ 356 (616)
+.|..|. ......+.+...+..+.. +.......+..+.|.|...... ... +.|...+ ...
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p----~p~--i~W~~~~~~~~~~~~~ 157 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNP----TPN--IYWIKNQTKVDMSNPR 157 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSS----CCE--EEEEETTEECCTTSTT
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCC----CCe--EEEEECCeEcccCCCe
Confidence 9999888 677888888766433221 1112334577888999863321 122 2232211 111
Q ss_pred EEEccccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 357 WVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 357 ~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
.. .....+.|.++...+.+.|+|.|.|..|...
T Consensus 158 ~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 190 (212)
T 2yd1_A 158 YS----LKDGFLQIENSREEDQGKYECVAENSMGTEH 190 (212)
T ss_dssp EE----EETTEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred EE----ccCCeEEEccCChhhCEEEEEEeecCCCcee
Confidence 11 1134789999999999999999999998753
No 326
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.41 E-value=1e-12 Score=119.46 Aligned_cols=126 Identities=15% Similarity=0.072 Sum_probs=79.2
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCC-----C--CCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeee
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGP-----G--EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE 243 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~-----~--~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~ 243 (616)
..|.|.+++.+|.|.|.|.+.|..|. . .... ...+.+.. ...+|.+....+. ..+..|+.+.|.|.+.+.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~-~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~~~l~C~~~g~ 157 (228)
T 3bae_H 80 VFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQ-GTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGY 157 (228)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECC-CEEEEECSCCCBCCEEEEECC------CCSEEEEEEEEEEE
T ss_pred EEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCC-cEEEEecCCCCCCCEEEEeccc-ccccCCCCEEEEEEEccE
Confidence 47999999999999999999987641 0 0111 11233332 2245655433322 235789999999999987
Q ss_pred -cCc-eeEEEECCeeecccCcEEEEecC---CceEEEecCCCCCCcEEEEEEEEcCCCCcee
Q psy12426 244 -PIP-TKEWLCNDITIISKDRFKIVNDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 300 (616)
Q Consensus 244 -p~~-~~~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 300 (616)
|.+ .+.|++++..+.......+...+ ....|.|.....++ |.|+|.|.|..|....
T Consensus 158 ~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~ 218 (228)
T 3bae_H 158 FPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKV 218 (228)
T ss_dssp BSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred eCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCE
Confidence 777 99999988653211111111111 12368888888766 9999999998776543
No 327
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=1.2e-12 Score=102.68 Aligned_cols=93 Identities=30% Similarity=0.411 Sum_probs=75.5
Q ss_pred CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEeecCCccEEEcCCCCCCCeEEEEEE
Q psy12426 407 FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACIVPANITATSVPDLKEGEEYEFRVI 484 (616)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~ 484 (616)
...|++|.++.+..++.+++.|+|.++ .+..+.+|.|+|+..+. .|.... ......++|.+|.|++.|.|+|+
T Consensus 5 ~~~P~~P~~~~~~~~~~~sv~l~W~~~---~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~ 79 (106)
T 2dju_A 5 SSGPKPPIDLVVTETTATSVTLTWDSG---NSEPVTYYGIQYRAAGTEGPFQEVD--GVATTRYSIGGLSPFSEYAFRVL 79 (106)
T ss_dssp CCSCCCCEEEEEEEEETTEEEEEEECC---CSSCCSEEEEEEEETTCCSCCCCBC--CCCSSEEEEESCCTTCEEEEEEE
T ss_pred CcCCcCCCCcEEEeccCCEEEEEEcCC---CCCCceEEEEEEEECCCCCCeEEcc--CCCccEEEEeCCCCCcEEEEEEE
Confidence 367889999999999999999999976 24569999999988765 454432 24577899999999999999999
Q ss_pred EEcCCCCCCCCCCCCCEEec
Q psy12426 485 AVNKGGPGEPSKASAPVTCK 504 (616)
Q Consensus 485 a~n~~G~g~~s~~~~~~~~~ 504 (616)
|+|..|.|++|......|..
T Consensus 80 A~n~~G~~~~S~~~~~~T~~ 99 (106)
T 2dju_A 80 AVNSIGRGPPSEAVRARTGE 99 (106)
T ss_dssp EECSSCBCCCCCCEEEECCC
T ss_pred EEeCCccCCCcccEEeEcCC
Confidence 99999999988766544443
No 328
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.41 E-value=1.1e-12 Score=103.48 Aligned_cols=97 Identities=16% Similarity=0.119 Sum_probs=75.5
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCC---cceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGS---PISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRV 483 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~---~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v 483 (616)
.+|.+|.++++..++.++|.|+|.+|...++. .+.+|.|+|+.... .+. ..........++|.+|+|+|.|.|+|
T Consensus 7 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~-~~~~~~~~~~~~i~gL~P~T~Y~f~V 85 (113)
T 1x5j_A 7 GPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK-YKNANATTLSYLVTGLKPNTLYEFSV 85 (113)
T ss_dssp CCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC-CEECCBCSSEEEEESCCTTCEECCEE
T ss_pred CCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeE-EEEEecCcCEEEeCCCCCCcEEEEEE
Confidence 57888999999999999999999987654331 24499999987432 222 22234557899999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCEEecc
Q psy12426 484 IAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 484 ~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
+|+|..|.|++|......|...
T Consensus 86 ~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 86 MVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp EEECSSCBCCCCCCCCEECCCS
T ss_pred EEecCCccCCCcccEEeeccCC
Confidence 9999999999998776655443
No 329
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.41 E-value=2.7e-12 Score=118.25 Aligned_cols=128 Identities=13% Similarity=-0.001 Sum_probs=78.8
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCC--CC-CCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEeee-
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGP--GE-PSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE- 243 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~--~~-~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~- 243 (616)
...|.|.+++.+|.|.|.|.+.|..|. .. .......+.+.. ...+|.+....+....+..|+.+.|.|.+.+.
T Consensus 73 ~~sL~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~ 152 (245)
T 3nfj_J 73 QFILSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFF 152 (245)
T ss_dssp EEEEEESSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEB
T ss_pred EEEEEECCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCc
Confidence 347999999999999999999984431 00 000111233322 23356554333333334458999999999985
Q ss_pred cCc-eeEEEECCeeecccCcEEE---E-----ecCC---ceEEEecCCCCCC-cEEEEEEEEcCCCCc
Q psy12426 244 PIP-TKEWLCNDITIISKDRFKI---V-----NDDK---STKLKVFDSKRGD-SGIYTLAVKNSWGTD 298 (616)
Q Consensus 244 p~~-~~~W~~~~~~~~~~~~~~~---~-----~~~~---~~~l~i~~l~~~~-~g~y~c~a~n~~g~~ 298 (616)
|.+ .+.|++++..+........ . .++. ...|.|......| .+.|+|.+.+.....
T Consensus 153 p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 153 PDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp SSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred CCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 333 7899999998754321110 0 0111 1367777776666 669999999865443
No 330
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.41 E-value=6.1e-12 Score=111.48 Aligned_cols=174 Identities=18% Similarity=0.277 Sum_probs=123.6
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.+ ...+.++.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.+.|
T Consensus 6 ~~P~~-~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 6 EAPGI-RKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp EEEEE-EECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCcc-cccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 34555 34456789999999999999999999999999999999888888888877778999999999999999999999
Q ss_pred CCCCceeeEEEEEecCCCCCCC---CccceeecCCeEEEEEeCCCCCCCCceEEEEEEEE--eC-CCCCEEEccccccce
Q psy12426 294 SWGTDKGTAKVTVLDIPSPPEG---PLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKM--DM-ETGRWVPMGDVSGTY 367 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~p~~p~~---~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~--~~-~~~~~~~~~~~~~~~ 367 (616)
..|.......+.+...|..... +.......+..+.|.|...... ...+.+... .. ...............
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p----~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 160 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRP----VPAMTWFHGQKLLQNSENITIENTEHYTH 160 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEES----CCEEEEEETTEECCCCSSEEEEECSSEEE
T ss_pred CCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeee----CCeeEEeECCEECCCCCceEEEEcCCEEE
Confidence 9888877788877665543221 1223445677888998853221 112222211 11 111111111222356
Q ss_pred EEeccccC-CCeEEEEEEEEecCcCC
Q psy12426 368 TRAENLIE-GHDYNFRVKAVNKIGES 392 (616)
Q Consensus 368 ~~i~~L~~-~~~y~~~v~a~n~~g~~ 392 (616)
+.|.++.. .+.+.|+|.|.|..|..
T Consensus 161 L~i~~~~~~~d~G~Y~C~a~n~~g~~ 186 (197)
T 3lcy_A 161 LVMKNVQRKTHAGKYKVQLSNVFGTV 186 (197)
T ss_dssp EEESSCCHHHHCEEEEEEEECSSCEE
T ss_pred EEEccccchhhCceEEEEEEcCcCce
Confidence 88888874 67899999999998864
No 331
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.40 E-value=5.4e-13 Score=122.02 Aligned_cols=124 Identities=9% Similarity=-0.003 Sum_probs=80.9
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCC--CCCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeeecC--c
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGP--GEPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPI--P 246 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~--~~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~--~ 246 (616)
..|.|.+++.+|.|.|+|.|.|..+. ....... +.+.. ...+|.+....+.. .+..|+.+.|.|.+.+.++ +
T Consensus 91 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~--l~V~~~~~~~p~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~ 167 (234)
T 2j6e_L 91 ASLAISGLRSEDEADYYCATWDDSLSAVIFGGGTK--LTVLGQPKAAPSVTLFPPSS-EELQANKATLVCLISDFFPGAV 167 (234)
T ss_dssp EEEEEESCCSTTCSEEEEEEEETTTTEEEECCCBC--CCBCCCCCCCCCCCEECCCH-HHHTTSCCCEEECCCBCSSCCC
T ss_pred EEEEECCCCHHHCEEEEEEEEcCCcceeEecCCEE--EEEecCCCCCCcccccCCCh-hHhcCCceEEEEEEEEEcCCce
Confidence 37999999999999999999998761 1111111 22211 12455553222221 2235889999999998644 3
Q ss_pred eeEEEECCeeecccCcEE-EE--ecC---CceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 247 TKEWLCNDITIISKDRFK-IV--NDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 247 ~~~W~~~~~~~~~~~~~~-~~--~~~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
.+.|++++..+..+.... .. .++ ....|.|..+...|.|.|+|.|.|..+..
T Consensus 168 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 225 (234)
T 2j6e_L 168 TVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV 225 (234)
T ss_dssp EEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCC
T ss_pred EEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCce
Confidence 899999998875432110 00 111 12478899999999999999999976553
No 332
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.40 E-value=1.4e-11 Score=110.64 Aligned_cols=173 Identities=18% Similarity=0.170 Sum_probs=119.3
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEe-cCCceEEEecCCC-CCCcEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVN-DDKSTKLKVFDSK-RGDSGIYTLAV 291 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~-~~~~~~l~i~~l~-~~~~g~y~c~a 291 (616)
.+|.|. ..+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+.......... .+....|.|.++. ..|.|.|+|.|
T Consensus 5 ~~P~~~-~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 5 TPPRFT-RTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp EEEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCeEE-eCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 456664 44567889999999999999999999999999999886554333332 2345689999994 99999999999
Q ss_pred EcCCCCceeeEEEEEecCCCC----CC---CCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC--------CC
Q psy12426 292 KNSWGTDKGTAKVTVLDIPSP----PE---GPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET--------GR 356 (616)
Q Consensus 292 ~n~~g~~~~~~~l~v~~~p~~----p~---~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~--------~~ 356 (616)
.|..|.....+.+.+...+.. |. .+.......+..+.|.|..... +... +.|...+. ..
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~----p~p~--v~W~~~g~~l~~~~~~~~ 157 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGN----PDPE--ITWFKDFLPVDTSNNNGR 157 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECS----SCCE--EEEEETTEEC------CC
T ss_pred EcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCC----CCCe--EEEEECCccccCcCCCce
Confidence 999988877888888764322 11 1111233456789999986432 1122 22322111 11
Q ss_pred EEEccccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 357 WVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 357 ~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
...........+.|.++...+.+.|+|.|.|..|...
T Consensus 158 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 194 (212)
T 2yd6_A 158 IKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRY 194 (212)
T ss_dssp EEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred EEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccc
Confidence 1111112346789999999999999999999999754
No 333
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.40 E-value=6.9e-13 Score=104.25 Aligned_cols=89 Identities=22% Similarity=0.308 Sum_probs=74.0
Q ss_pred CCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEE
Q psy12426 405 DPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRV 483 (616)
Q Consensus 405 ~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v 483 (616)
+....|.+|. +.+...+.+++.|+|.+|.. .++.|.+|.|+|+..+. .|... ........++|.+|.|++.|.|+|
T Consensus 3 T~~~~P~~p~-~~v~~~~~~sv~l~W~~p~~-~~g~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V 79 (107)
T 2dn7_A 3 SGSSGPGRPT-MMISTTAMNTALLQWHPPKE-LPGELLGYRLQYCRADEARPNTI-DFGKDDQHFTVTGLHKGTTYIFRL 79 (107)
T ss_dssp TCCCCCCCCE-EEEEECSTTEEEEEEECCSS-CSSCCCEEEEEEEETTCSSCEEE-EEETTCCEEEEECCCTTCEEEEEE
T ss_pred CCCCCCCCCc-EeEEecCCCEEEEEECCCCC-CCCceeEEEEEEEECCCCCCEEE-EeCCCccEEEeCCCCCCCEEEEEE
Confidence 3456788777 77777799999999998764 44469999999998776 66654 445667899999999999999999
Q ss_pred EEEcCCCCCCCCC
Q psy12426 484 IAVNKGGPGEPSK 496 (616)
Q Consensus 484 ~a~n~~G~g~~s~ 496 (616)
+|+|..|.|+++.
T Consensus 80 ~A~n~~G~g~~s~ 92 (107)
T 2dn7_A 80 AAKNRAGLGEEFE 92 (107)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEcCCcccCCee
Confidence 9999999999887
No 334
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.40 E-value=8.3e-13 Score=119.52 Aligned_cols=135 Identities=13% Similarity=0.012 Sum_probs=85.8
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCC-CCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeE-EEEEEEe-eecCc
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKG-GPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNF-EFDINVI-GEPIP 246 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~-g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~-~l~c~~~-~~p~~ 246 (616)
....|.|.+++.+|.|.|+|.+.+.. |... .... +.+ ..+|.+........ ..|+.+ .|.|.+. +.|.+
T Consensus 76 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~-~~~~--L~V---~~~P~~~~~~~~~~--~~g~~~~~l~C~~~~g~P~p 147 (221)
T 3eow_R 76 RDASLRMFGLRVEDEGSYTCLFVTFPQGSRS-VDIW--LRV---LAKPQNTAEVQKVQ--LTGEPVPMARCVSTGGRPPA 147 (221)
T ss_dssp CCCEEECCCSSCCCCSCBEEEEEESSSCSCE-EECC--CCC---CCCCEEEEEEECCC--CCSSSCCEEEEEEESCSSCC
T ss_pred CCceEEEccCChHHCeEEEEEEEeCCCCceE-EEEE--EEE---EECCCceeecCCcc--cCCceEEEEEEECCCccCCC
Confidence 34589999999999999999999875 3321 1111 111 23566542222222 567788 5999988 88999
Q ss_pred eeEEEECCeeecccCcEEEEec---CCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCC
Q psy12426 247 TKEWLCNDITIISKDRFKIVND---DKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPE 314 (616)
Q Consensus 247 ~~~W~~~~~~~~~~~~~~~~~~---~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~ 314 (616)
.+.|++++.............. ...+.|.|.++...|.|.|+|.|.|..+..... +.+...|..|.
T Consensus 148 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~--~~v~~~~~~~~ 216 (221)
T 3eow_R 148 QITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQL--LTVSLTVYYPH 216 (221)
T ss_dssp CEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEE--EEECCCCCC--
T ss_pred eeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeE--EEEEEEEEccc
Confidence 9999987543221111100111 123579999999999999999999987665444 44445554443
No 335
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=99.40 E-value=1.3e-12 Score=100.12 Aligned_cols=86 Identities=19% Similarity=0.185 Sum_probs=71.9
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
..+++|.++++..++.+++.|+|.+|. +.+.+|.|.|+..++ .+.....++++...++|.+|.|++.|.|+|+|.
T Consensus 3 t~~~~P~~l~v~~~t~~Si~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 3 SVSSVPTKLEVVAATPTSLLISWDASS----SSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAY 78 (97)
T ss_dssp --CCSSSSCEEEEEETTEEEEECCCCC----SSCCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCCceEEEecCCCEEEEEEeCCC----CCCCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 467899999999999999999999763 269999999998765 334445567778999999999999999999999
Q ss_pred cCCCCCCCCCC
Q psy12426 487 NKGGPGEPSKA 497 (616)
Q Consensus 487 n~~G~g~~s~~ 497 (616)
|..|.|+.+..
T Consensus 79 ~~~G~gp~ss~ 89 (97)
T 3qht_C 79 YSYYDLYYSYS 89 (97)
T ss_dssp EEETTEEEECS
T ss_pred eCCccCCCCCC
Confidence 99999976654
No 336
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.40 E-value=5.2e-12 Score=115.86 Aligned_cols=133 Identities=11% Similarity=-0.006 Sum_probs=81.3
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCC-----CCCCCCCCEEeccccC----CCceeccCCcceEEEcCCeEEEEEEEe
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPG-----EPSDPTAPHIARAKKV----SPYINRDQLSDIKVRAGSNFEFDINVI 241 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~-----~~s~~~~~~~~~~~~~----~P~~~~~~~~~~~v~~g~~~~l~c~~~ 241 (616)
...|.|.+++.+|.|.|.|.+.+..+.. .... ...+.+..... +|......+....+..|+.+.|.|.+.
T Consensus 79 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~-~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~ 157 (242)
T 1hxm_B 79 TSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGP-GTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLE 157 (242)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECC-CEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEE
T ss_pred EEEEEECCCCcccCEEEEEeeecCCccccccceeEcC-cEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEe
Confidence 3479999999999999999998863110 0111 11233332111 333222223333355699999999999
Q ss_pred ee-cC-ceeEEEECCe-eecccCc-EEEEecCC---ceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEE
Q psy12426 242 GE-PI-PTKEWLCNDI-TIISKDR-FKIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 306 (616)
Q Consensus 242 ~~-p~-~~~~W~~~~~-~~~~~~~-~~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v 306 (616)
+. |. +.+.|++++. .+..... .....++. ...|.|..... + |.|+|.|.|..+.......+.+
T Consensus 158 g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 158 KFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred eEECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 87 54 7999999987 4432210 01111111 13688877664 4 9999999998887766665554
No 337
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.39 E-value=1.1e-12 Score=104.46 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=72.1
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|. ..++++.+.+|+.+.|.|.+.|+|.|.|+|+|++..+...++|....
T Consensus 7 pp~i~-~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~--------------------------- 58 (114)
T 2cqv_A 7 GPQII-QFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVEN--------------------------- 58 (114)
T ss_dssp CCEES-CCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEE---------------------------
T ss_pred CCEEE-eCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEE---------------------------
Confidence 57777 46899999999999999999999999999999999988666665442
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
......|.|.++...|.|.|.|.|.|..|.....
T Consensus 59 -~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~ 92 (114)
T 2cqv_A 59 -SENGSKLTILAARQEHCGCYTLLVENKLGSRQAQ 92 (114)
T ss_dssp -CSSEEEEEETTCCTTTCEEEEEEEECSSCEEECC
T ss_pred -cCCEEEEEECCCChhcCEEEEEEEEECCCcEEEE
Confidence 1124579999999999999999999999865544
No 338
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=1e-12 Score=102.97 Aligned_cols=92 Identities=22% Similarity=0.305 Sum_probs=75.7
Q ss_pred CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEE
Q psy12426 407 FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIA 485 (616)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a 485 (616)
...|++|.++++..++.+++.|+|.+|...++ .|.+|.|+|+..+. .|.... . ....++|.+|.|++.|.|+|+|
T Consensus 5 ~~~P~~P~~l~~~~~~~~si~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~-~--~~~~~~i~~L~p~t~Y~~~V~A 80 (106)
T 2ed8_A 5 SSGPGPVENLQAVSTSPTSILITWEPPAYANG-PVQGYRLFCTEVSTGKEQNIE-V--DGLSYKLEGLKKFTEYSLRFLA 80 (106)
T ss_dssp CCCCCCCEEEEEECSSTTEEEEEEECCSSCSS-CCCEEEEEEEETTTCCEEEEE-E--CSSCEEEESCCTTCEEEEEEEE
T ss_pred CCCCcCCceeEEEecCCCEEEEEECCCCCCCC-CeeEEEEEEEECCCCceEEEe-C--CccEEEECCCCCCCEEEEEEEE
Confidence 46788999999999999999999998865444 69999999998776 554432 2 3689999999999999999999
Q ss_pred EcCCCCCCCCCCCCCEE
Q psy12426 486 VNKGGPGEPSKASAPVT 502 (616)
Q Consensus 486 ~n~~G~g~~s~~~~~~~ 502 (616)
.|..|.|++|....+.|
T Consensus 81 ~n~~G~g~~S~~~~~~T 97 (106)
T 2ed8_A 81 YNRYGPGVSTDDITVVT 97 (106)
T ss_dssp ECSSCEEEECCCEEEEC
T ss_pred EeCCccCCCcCCEEEEc
Confidence 99999999887654444
No 339
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=99.38 E-value=3.5e-12 Score=115.31 Aligned_cols=168 Identities=16% Similarity=0.130 Sum_probs=113.1
Q ss_pred CCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEcc--------ccccceEEe--ccccCCCeEEE
Q psy12426 312 PPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMG--------DVSGTYTRA--ENLIEGHDYNF 381 (616)
Q Consensus 312 ~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~--------~~~~~~~~i--~~L~~~~~y~~ 381 (616)
.|.+ +.+.......+.++|+++... +.....|.+.++..+ ..|..+. ......+.+ .++..+..|.|
T Consensus 23 ~P~n-l~C~~~~~~~l~C~W~~~~~~-~~~~~~y~l~y~~~~-~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~ 99 (227)
T 1eer_B 23 GPEE-LLCFTERLEDLVCFWEEAASA-GVGPGQYSFSYQLED-EPWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLEL 99 (227)
T ss_dssp STTS-CEEEBSSSSCCEEEEEESCCS-SCCTTSEEEEEEETT-SCCEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEE
T ss_pred CCcC-CeEECCCCCEEEEEecCCCCC-CCCCccEEEEEEcCC-CCceeccceeccCCCCCceEEEEeCCCcceeeEEEEE
Confidence 3555 666666778899999976543 224567888887653 2243332 112223333 46677889999
Q ss_pred EEEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEec-CCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeE
Q psy12426 382 RVKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWG-KDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKAC 459 (616)
Q Consensus 382 ~v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~-~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~ 459 (616)
+|.|.|..+ .. ...+.+ .....|++|.++++...+ ...+.|+|.+|.......+..|+|+|+..++ .|....
T Consensus 100 ~V~a~~~~~--~~---~~~~~~-~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~ 173 (227)
T 1eer_B 100 RVTAASGAP--RY---HRVIHI-NEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV 173 (227)
T ss_dssp EEEETTSCE--EE---EEEECG-GGSEECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE
T ss_pred EEEecCCCc--cE---EEEEEe-eeeEccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE
Confidence 999865332 11 111111 122468899999988764 7899999998764322237899999998765 576533
Q ss_pred eecCCccEEEcCCCCCCCeEEEEEEEEcC
Q psy12426 460 IVPANITATSVPDLKEGEEYEFRVIAVNK 488 (616)
Q Consensus 460 ~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~ 488 (616)
........+.|.+|.|++.|.|+|+|...
T Consensus 174 ~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~ 202 (227)
T 1eer_B 174 EILEGRTECVLSNLRGRTRYTFAVRARMA 202 (227)
T ss_dssp EECTTCCEEEECCCCSSCEEEEEEEEEEC
T ss_pred EEecCceEEEEcccCCCCeEEEEEEEeEC
Confidence 44455789999999999999999999964
No 340
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.38 E-value=1.4e-12 Score=100.73 Aligned_cols=88 Identities=18% Similarity=0.336 Sum_probs=70.3
Q ss_pred CCCCCCCEEEEecCCeEEEEecCCCC-CCCCcceeEEEEEeeCCC----CceEeEeecCCccEEEcCCCCCCCeEEEEEE
Q psy12426 410 PDRPGQPTVTDWGKDHVDLEWTPPKK-DGGSPISQYIIEKKPKYG----PWEKACIVPANITATSVPDLKEGEEYEFRVI 484 (616)
Q Consensus 410 p~~p~~~~~~~~~~~~v~l~W~~p~~-~~~~~i~~Y~i~~~~~~~----~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~ 484 (616)
..+|.++.+..++.+++.|+|.+|.. ..++.|.+|.|.|+..++ .|... .+.+....+.|.+|.|++.|.|+|+
T Consensus 5 ~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~-~v~~~~~~~~l~~L~p~t~Y~v~V~ 83 (102)
T 3n1f_C 5 ITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRD-VVEGSKQWHMIGHLQPETSYDIKMQ 83 (102)
T ss_dssp CSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEE-EEETTCSEEEECSCCTTCEEEEEEE
T ss_pred CCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEE-EEcCCceEEECCCCCCCCEEEEEEE
Confidence 35677888889999999999998753 345579999999998764 35443 4445677899999999999999999
Q ss_pred EEcCCCCCCCCCCC
Q psy12426 485 AVNKGGPGEPSKAS 498 (616)
Q Consensus 485 a~n~~G~g~~s~~~ 498 (616)
|.|..|.|++|...
T Consensus 84 A~n~~G~G~~S~~~ 97 (102)
T 3n1f_C 84 CFNEGGESEFSNVM 97 (102)
T ss_dssp EEETTEECCCCCCE
T ss_pred EECCCcCCCCCCCE
Confidence 99999999998753
No 341
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.38 E-value=4.8e-12 Score=118.25 Aligned_cols=127 Identities=12% Similarity=0.037 Sum_probs=80.6
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc-
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP- 246 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~- 246 (616)
...|.|.+++.+|.|.|.|.+.|..+....... ..+.+.. ...+|.+....+....+..|+.+.|.|.+.+.+.+
T Consensus 99 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~-~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~ 177 (268)
T 3pl6_D 99 VSTLKIQRTERGDSAVYLCATSALGDTQYFGPG-TRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 177 (268)
T ss_dssp SEEEEECSCCGGGCEEEEEEEESSSSSCEECCC-EEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEEEECCCCcccCEEEEEEEecCCCceeeCCc-EEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCC
Confidence 458999999999999999999974322111111 1233322 23356554433444445568999999999997665
Q ss_pred -eeEEEECCeeecccCcEEE---E-----ecCC---ceEEEecCCCCCC-cEEEEEEEEcCCCCc
Q psy12426 247 -TKEWLCNDITIISKDRFKI---V-----NDDK---STKLKVFDSKRGD-SGIYTLAVKNSWGTD 298 (616)
Q Consensus 247 -~~~W~~~~~~~~~~~~~~~---~-----~~~~---~~~l~i~~l~~~~-~g~y~c~a~n~~g~~ 298 (616)
.+.|++++..+..+.+... . .++. ...|.|......| .|.|+|.+.|.....
T Consensus 178 ~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~ 242 (268)
T 3pl6_D 178 VELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 242 (268)
T ss_dssp EEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred eEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCC
Confidence 8999999988754321110 0 0110 1356777776666 999999999865433
No 342
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.38 E-value=3.7e-12 Score=114.04 Aligned_cols=147 Identities=16% Similarity=0.144 Sum_probs=105.2
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEee-cCC--ccEEEcCCCCCCCeEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIV-PAN--ITATSVPDLKEGEEYEFRV 483 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~-~~~--~~~~~l~~L~p~t~Y~~~v 483 (616)
.+|++|.++.+...+..++.++|.++. +++. ...|.|+|+..+. .|..+... ... ...+.+.+|.+.+.|.|+|
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~-~~~~-~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V 79 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGT-DGGL-PTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMV 79 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCS-SSCC-CSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEE
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCC-CCCC-CceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEE
Confidence 478899999998889999999999755 4443 4689999997665 66665321 112 2344556799999999999
Q ss_pred EEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCCC
Q psy12426 484 IAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSKP 563 (616)
Q Consensus 484 ~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 563 (616)
.|.|..|.+.... . ..... ....|++|.++
T Consensus 80 ~A~N~~G~~~s~~-~---~~~~~----------------------------------------------~~v~p~pP~~l 109 (210)
T 3n06_B 80 NATNQMGSSFSDE-L---YVDVT----------------------------------------------YIVQPDPPLEL 109 (210)
T ss_dssp EEEETTEEEECCC-E---EECGG----------------------------------------------GCBCCCCCEEE
T ss_pred EEEcCCCCeeCCc-E---EEchh----------------------------------------------heEecCCCceE
Confidence 9999999874221 1 11110 01347788888
Q ss_pred eEEeec----CCcEEEEeeCCCCCC--CC-ceeeeEEEEeecCCCCeEEc
Q psy12426 564 EATDVD----KDHIKIKWQQPISNG--GS-AIKGYEVERRERTSGRWIKI 606 (616)
Q Consensus 564 ~~~~~~----~~~i~l~W~~p~~~~--~~-~i~~Y~i~~~~~~~~~w~~~ 606 (616)
.+.... .+++.|+|++|.... +| .+.+|+|.|+..++.+|...
T Consensus 110 ~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~ 159 (210)
T 3n06_B 110 AVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH 159 (210)
T ss_dssp EEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEE
T ss_pred EEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEE
Confidence 776543 589999999976432 24 47999999999888889764
No 343
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.38 E-value=2e-11 Score=107.88 Aligned_cols=170 Identities=14% Similarity=0.104 Sum_probs=114.1
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEe-eecCceeEEEECCeeeccc--CcEEEEecCC-------ceEEEecCCCCCCc
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVI-GEPIPTKEWLCNDITIISK--DRFKIVNDDK-------STKLKVFDSKRGDS 284 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~-~~p~~~~~W~~~~~~~~~~--~~~~~~~~~~-------~~~l~i~~l~~~~~ 284 (616)
+|.| ...+.+..+.+|+.+.|.|.+. +.|.+.+.|++++..+... .++.+..... ...|.|.++...|.
T Consensus 2 ~~~~-~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 2 ESPF-VGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCSE-EECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCee-ccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 4555 3446788999999999999999 9999999999999988755 2344443332 46899999999999
Q ss_pred EEEEEEEEcCCCCce-eeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEcccc
Q psy12426 285 GIYTLAVKNSWGTDK-GTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDV 363 (616)
Q Consensus 285 g~y~c~a~n~~g~~~-~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~ 363 (616)
|.|+|.+.|..|... ..+.+.+..+|.....+.......+..+.|.|...... .+ ..+ .|...+...-......
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p-~~v--~W~~~~~~~~~~~~~~ 155 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPP--EP-VDL--LWLQDAVPLATAPGHG 155 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSS--CC-CEE--EEEESSCBSSSSTTSS
T ss_pred cEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCC--CC-CEE--EEEECCEeccCCCCcC
Confidence 999999999877543 34778887766433222233445677899999863322 11 122 2222211100000002
Q ss_pred ccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 364 SGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 364 ~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
....+.|.++. +.+.|+|.|.|..|..
T Consensus 156 ~~~~L~i~~~~--d~G~Y~C~a~N~~g~~ 182 (195)
T 2c5d_C 156 PQRSLHVPGLN--KTSSFSCEAHNAKGVT 182 (195)
T ss_dssp CCEEEEECCCS--SCEEEEEEEEETTEEE
T ss_pred CCCeEEEcccc--cCceEEEEEEcCCCce
Confidence 45678888887 4689999999998864
No 344
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=99.38 E-value=1.5e-12 Score=100.27 Aligned_cols=84 Identities=23% Similarity=0.320 Sum_probs=70.0
Q ss_pred CCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEc
Q psy12426 409 RPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVN 487 (616)
Q Consensus 409 ~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n 487 (616)
+|++|.++.+..++.+++.|+|.+|.. .|.+|.|+|+..+. .+.....+.....+++|.+|.|++.|.|+|+|.|
T Consensus 1 ~p~~P~~l~~~~~~~~sv~lsW~pP~~----~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 1 MLQPPFNIKVTNITLTTAVVTWQPPIL----PIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLEPNTTYEIRIVARN 76 (100)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCSS----CCSEEEEEEEESSCTTTCEEEEECTTEEEEEECSCCTTCEEEEEEEEEE
T ss_pred CCccCCccEEEEecCCEEEEEEcCCcc----cCCEEEEEEEECCCCCCceEEEECCcceEEEECCCCCCCEEEEEEEEEe
Confidence 477899999999999999999998753 59999999987663 2222334567789999999999999999999999
Q ss_pred CCCCCCCCC
Q psy12426 488 KGGPGEPSK 496 (616)
Q Consensus 488 ~~G~g~~s~ 496 (616)
..|.|+++.
T Consensus 77 ~~g~s~p~~ 85 (100)
T 3b83_A 77 GQQYSPPVS 85 (100)
T ss_dssp TTEECCCEE
T ss_pred CCCCCCCEE
Confidence 999988765
No 345
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.38 E-value=4.1e-12 Score=99.12 Aligned_cols=92 Identities=16% Similarity=0.195 Sum_probs=72.7
Q ss_pred CCCCCCCCCCCCEEEEecCCeEEEEe--cCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEE
Q psy12426 405 DPFGRPDRPGQPTVTDWGKDHVDLEW--TPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFR 482 (616)
Q Consensus 405 ~~~~~p~~p~~~~~~~~~~~~v~l~W--~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 482 (616)
+...+|++|.++++..++.+++.|+| .+|...++ . .+|.|+|+..... ...... ...++|.+|.|++.|.|+
T Consensus 5 T~~~~P~~p~~l~~~~~~~~sv~l~W~~~~P~~~ng-~-~~Y~v~y~~~~~~-~~~~~~---~~~~~i~~L~p~t~Y~f~ 78 (107)
T 1x5a_A 5 SSGAESLSGLSLKLVKKEPRQLELTWAGSRPRNPGG-N-LSYELHVLNQDEE-WHQMVL---EPRVLLTKLQPDTTYIVR 78 (107)
T ss_dssp TTTCCCCCSCCCCEEEEETTEEEEECCCCCSSCCSS-C-CEEEEEEECSSCE-EEEEES---SSEEEEESCCSSCEEEEE
T ss_pred CCCCCCCCCCceEEEecCCCEEEEEECCCCCCCCCC-c-eEEEEEEEeCCCC-ceEEEe---cceEEECCCCCCCEEEEE
Confidence 45678999999999999999999999 87766555 4 8899999876221 111122 223999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCEE
Q psy12426 483 VIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 483 v~a~n~~G~g~~s~~~~~~~ 502 (616)
|+|.|..|.|++|....+.|
T Consensus 79 V~A~~~~G~g~~S~~~~~~T 98 (107)
T 1x5a_A 79 VRTLTPLGPGPFSPDHEFRT 98 (107)
T ss_dssp EEEECSSSCCCCCCCEEEEC
T ss_pred EEEECCCccCCCCCCEEEEE
Confidence 99999999999998765444
No 346
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=3e-12 Score=101.89 Aligned_cols=93 Identities=26% Similarity=0.367 Sum_probs=75.4
Q ss_pred CCCCCCCCCEEEEe--cCCeEEEEecCCCCCCCCcceeEEEEEeeCCC----CceEeEeecCCccEEEcCCCCCCCeEEE
Q psy12426 408 GRPDRPGQPTVTDW--GKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG----PWEKACIVPANITATSVPDLKEGEEYEF 481 (616)
Q Consensus 408 ~~p~~p~~~~~~~~--~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~----~~~~~~~~~~~~~~~~l~~L~p~t~Y~~ 481 (616)
.+|.+|.++++... +.+++.|+|.+|...++ .|.+|.|+|+..+. .|... ........++|.+|.|++.|.|
T Consensus 7 ~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g-~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~ 84 (114)
T 2ede_A 7 GPTSAPKDLTVITREGKPRAVIVSWQPPLEANG-KITAYILFYTLDKNIPIDDWIME-TISGDRLTHQIMDLNLDTMYYF 84 (114)
T ss_dssp CCCSCCEEEEEEECSSCSSCEEEEEECCSSCSS-CCSEEEEEEESCSSSCTTTSEEE-EEETTCCEEEECSCCSSCEEEE
T ss_pred CCCCCCcceEEEEccCCCCEEEEEECCCCCCCC-ceeEEEEEEEeCCCCCccceEEE-EECCCceEEEEcCCCCCCEEEE
Confidence 35578889999887 78999999998865544 69999999987543 45433 4456788999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCCCEE
Q psy12426 482 RVIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 482 ~v~a~n~~G~g~~s~~~~~~~ 502 (616)
+|+|.|..|.|++|....+.|
T Consensus 85 ~V~A~n~~G~g~~S~~~~~~T 105 (114)
T 2ede_A 85 RIQARNSKGVGPLSDPILFRT 105 (114)
T ss_dssp EEEEECSSCBCCCCCCEEEEC
T ss_pred EEEEEeCCcCcCCcccEEEEe
Confidence 999999999999987655433
No 347
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.38 E-value=1.5e-11 Score=115.55 Aligned_cols=127 Identities=11% Similarity=0.020 Sum_probs=79.0
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCC----CCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEeee
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGE----PSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE 243 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~----~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~ 243 (616)
...|.|.+++.+|.|.|.|.+.|..|... ... ...+.+.. ...+|.+....+....+..|+.+.|.|.+.+.
T Consensus 99 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~-~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~ 177 (279)
T 2wbj_D 99 LSTLTVTSAHPEDSSFYICSARDLTSGANNEQFFGP-GTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF 177 (279)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTCBTSCCEEECC-CEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEE
T ss_pred EEEEEEccCCccCCEEEEEEEcccccCCccceeeCC-CEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeE
Confidence 34799999999999999999999543110 011 11233322 12456554333333334468899999999987
Q ss_pred -cC-ceeEEEECCeeecccCcEE---EE----ecCC----ceEEEecCCCCC-CcEEEEEEEEcCCCCc
Q psy12426 244 -PI-PTKEWLCNDITIISKDRFK---IV----NDDK----STKLKVFDSKRG-DSGIYTLAVKNSWGTD 298 (616)
Q Consensus 244 -p~-~~~~W~~~~~~~~~~~~~~---~~----~~~~----~~~l~i~~l~~~-~~g~y~c~a~n~~g~~ 298 (616)
|. +.+.|++++..+....... .. ..+. .+.|.|...... +.+.|+|.|.|.....
T Consensus 178 ~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 178 YPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp BSSCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred cCCCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 43 6999999998875432111 00 0111 135777777665 4678999999965443
No 348
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=2.1e-12 Score=103.60 Aligned_cols=93 Identities=14% Similarity=0.195 Sum_probs=72.6
Q ss_pred CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCC---cceeEEEEEeeCCC---CceEeEeecCCccEEEcCCCCCCCeEE
Q psy12426 407 FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGS---PISQYIIEKKPKYG---PWEKACIVPANITATSVPDLKEGEEYE 480 (616)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~---~i~~Y~i~~~~~~~---~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 480 (616)
..+|.+|.++++..++.++|.|+|.+|...++. .+.+|+|+|+..+. .|.. +......++|.+|+|++.|.
T Consensus 16 ~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~---~~~~~~~~~v~gL~P~T~Y~ 92 (123)
T 2edd_A 16 STPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKS---EDTTSLSYTATGLKPNTMYE 92 (123)
T ss_dssp CCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCC---EEESSSEEEEESCCTTCEEE
T ss_pred CCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEE---EeCCceEEEecCCCCCCEEE
Confidence 467888999999999999999999976544331 23499999988643 3332 22347899999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCEE
Q psy12426 481 FRVIAVNKGGPGEPSKASAPVT 502 (616)
Q Consensus 481 ~~v~a~n~~G~g~~s~~~~~~~ 502 (616)
|+|+|+|..|.|++|......|
T Consensus 93 f~V~A~n~~g~g~~S~~v~~~T 114 (123)
T 2edd_A 93 FSVMVTKNRRSSTWSMTAHATT 114 (123)
T ss_dssp EEEEECCSSSCCCCCCCEEEEC
T ss_pred EEEEEeCCCcccCCCCCEEEEc
Confidence 9999999999999988654443
No 349
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.37 E-value=4.9e-13 Score=100.48 Aligned_cols=79 Identities=10% Similarity=0.050 Sum_probs=62.9
Q ss_pred CCccCCCCCCceE--ecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeec
Q psy12426 1 APHIDRRHLGDIK--LSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKC 78 (616)
Q Consensus 1 ~P~i~~~~~~~~~--v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~ 78 (616)
||.|. .+++++. +.+|++|.|.|.+.| |.|.|+|+|||+.|..+..|.....+
T Consensus 4 P~~i~-~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~----------------------- 58 (91)
T 2lvc_A 4 PVHIV-DPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEG----------------------- 58 (91)
T ss_dssp CCCCC-BCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEET-----------------------
T ss_pred CcEEe-ccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecC-----------------------
Confidence 45554 6677655 468999999999876 88999999999999877777665322
Q ss_pred cccCCCCCceEecCcccCCeEEEEEEEEcCC
Q psy12426 79 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKG 109 (616)
Q Consensus 79 ~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~ 109 (616)
...+|.|.++.+.|+|.|.|.|.|..
T Consensus 59 -----~~~~L~I~~v~~~D~G~Y~C~a~n~~ 84 (91)
T 2lvc_A 59 -----PHRRLVLPATQPSDGGEFQCVAGDEC 84 (91)
T ss_dssp -----TEEEEEESSCCGGGCSEEEEECSSCE
T ss_pred -----CeEEEEeCCCChhhcEEEEEEEcceE
Confidence 24579999999999999999997643
No 350
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.37 E-value=4.9e-12 Score=116.46 Aligned_cols=125 Identities=11% Similarity=-0.011 Sum_probs=79.0
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCC--CCCCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEeee-c
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGP--GEPSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-P 244 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~--~~~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p 244 (616)
...|.|.+++.+|.|.|.|.+.+.... ...+ ....+.+.. ...+|.+....+....+..|+.+.|.|.+.+. |
T Consensus 75 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~-~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p 153 (245)
T 4ei6_B 75 YFTLKIQPTALEDSAVYFCASSFWGAYAEQFFG-PGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 153 (245)
T ss_dssp CEEEEECSCCGGGCEEEEEEEECSSTTCCCEEC-CCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBS
T ss_pred eEEEEECCCCHhHCEEEEEEEccCCCcceEEEc-CCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeC
Confidence 448999999999999999999864211 1111 111233322 22456554333444445568999999999985 4
Q ss_pred Cc-eeEEEECCeeecccCcEEEEe-------cCCc----eEEEecCCCCCC-cEEEEEEEEcCCC
Q psy12426 245 IP-TKEWLCNDITIISKDRFKIVN-------DDKS----TKLKVFDSKRGD-SGIYTLAVKNSWG 296 (616)
Q Consensus 245 ~~-~~~W~~~~~~~~~~~~~~~~~-------~~~~----~~l~i~~l~~~~-~g~y~c~a~n~~g 296 (616)
.+ .+.|++++..+....+..... .++. ..|.|......| .|.|+|.|.|...
T Consensus 154 ~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 154 DHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp SCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCC
Confidence 44 899999998876432211100 0111 247777777777 8999999998543
No 351
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.37 E-value=6.1e-12 Score=113.10 Aligned_cols=125 Identities=13% Similarity=-0.020 Sum_probs=75.2
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCC-CCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc-e
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPG-EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-T 247 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~-~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~ 247 (616)
..|.|.+++.+|.|.|.|.+.|..+.. .... ...+.+.. ...+|.+....+.. .+..|+.+.|.|.+.+. |.+ .
T Consensus 78 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~-~~~L~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~ 155 (215)
T 1c5d_H 78 VFLKMNSLQTEDTAIYFCTREDGWNYFDYWGP-GTMVTVSSAQTTAPSVYPLAPGC-GDTTSSTVTLGCLVKGYFPEPVT 155 (215)
T ss_dssp EEEEESSCCGGGCEEEEEEECCSSSCSCCBCC-CEEEEECSSCCBCCCEEEECCCS-SCCCCSSEEEEEEEEEEBSSCCE
T ss_pred EEEEECCCCcccCEEEEEEEecCCcccceEcC-CEEEEecCCCCCCCeEEeccCCh-hhccCCcEEEEEEEeeeEcCCcE
Confidence 479999999999999999998865321 1111 12233332 23456554322222 24679999999999987 777 9
Q ss_pred eEEEECCeeecccCcEEEEecCCceEE--EecCCCCCCcEEEEEEEEcCCCCcee
Q psy12426 248 KEWLCNDITIISKDRFKIVNDDKSTKL--KVFDSKRGDSGIYTLAVKNSWGTDKG 300 (616)
Q Consensus 248 ~~W~~~~~~~~~~~~~~~~~~~~~~~l--~i~~l~~~~~g~y~c~a~n~~g~~~~ 300 (616)
+.|++++..+........... +...+ .+......+ |.|+|.|.|..|....
T Consensus 156 v~W~~~g~~~~~~~~~~~~~~-g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~ 208 (215)
T 1c5d_H 156 VTWNSGALSSDVHTFPAVLQS-GLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKV 208 (215)
T ss_dssp EEEGGGTTCCSCCBCCCEEET-TEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEE
T ss_pred EEEccCCccCceEecCcccCC-CCEEEEEEEecccCCC-CeEEEEEEeCCCCccE
Confidence 999998865421111111111 11111 122333345 9999999998776543
No 352
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.37 E-value=2.6e-11 Score=120.11 Aligned_cols=148 Identities=18% Similarity=0.212 Sum_probs=107.0
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCC--CCcceeEEEEEeeCCCCceEeEee---cCCccEEEcCCCCCCCeEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDG--GSPISQYIIEKKPKYGPWEKACIV---PANITATSVPDLKEGEEYEFR 482 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~--~~~i~~Y~i~~~~~~~~~~~~~~~---~~~~~~~~l~~L~p~t~Y~~~ 482 (616)
.+|++|.++.........+.++|.++...+ |...+.|.|+|+..+. ....... .+....+.+.+|.+.+.|.|+
T Consensus 280 ~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~-~~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~ 358 (483)
T 3e0g_A 280 YPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGK-YVRLKRAEAPTNESYQLLFQMLPNQEIYNFT 358 (483)
T ss_dssp CCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCC-EEEECCCSSCSCSCEEEEEECCTTCCCEEEE
T ss_pred CCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCC-CccccCCcccCCCEEEEEEccCCCCcEEEEE
Confidence 467888888888777789999999765432 3347889999986542 1222111 223567899999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCCCCCC
Q psy12426 483 VIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPGKPSK 562 (616)
Q Consensus 483 v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 562 (616)
|.|.|..|.+. +. ..... .....|+||.+
T Consensus 359 V~A~N~lG~~~-S~----~~~~~----------------------------------------------~~~VkP~PP~n 387 (483)
T 3e0g_A 359 LNAHNPLGRSQ-ST----ILVNI----------------------------------------------TEKVYPHTPTS 387 (483)
T ss_dssp EEEECSSCEEE-EE----EEECG----------------------------------------------GGGBCCCCCEE
T ss_pred EEEEeCCCCcc-cc----eEEEe----------------------------------------------ccccCCCCCee
Confidence 99999999876 22 11110 00145788888
Q ss_pred CeEEeecCCcEEEEeeCCCCCCCCceeeeEEEEeecCCC-CeEEccC
Q psy12426 563 PEATDVDKDHIKIKWQQPISNGGSAIKGYEVERRERTSG-RWIKITP 608 (616)
Q Consensus 563 ~~~~~~~~~~i~l~W~~p~~~~~~~i~~Y~i~~~~~~~~-~w~~~~~ 608 (616)
+++...+.+++.|+|++|.. .++.+..|+|+|+..+.. +|..+..
T Consensus 388 l~v~~~~stsl~LsW~~P~~-~~~~~L~YeVrYr~~~~~~~~~~vsv 433 (483)
T 3e0g_A 388 FKVKDINSTAVKLSWHLPGN-FAKINFLCEIEIKKSNSVQEQRNVTI 433 (483)
T ss_dssp EEECCSSSSSCCEEEECCSC-CTTSBCCCEEEEECSSSCCCEEECCC
T ss_pred eEEEEecCCeEEEEECCCCC-CCCceEEEEEEEEECCCCCceEEEEE
Confidence 88887788999999999853 367889999999988765 5776543
No 353
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.36 E-value=3.9e-11 Score=105.55 Aligned_cols=166 Identities=14% Similarity=0.175 Sum_probs=114.5
Q ss_pred CCceeccCCcceEEEc-CCeEEEEEEEeeecC--ceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEE
Q psy12426 215 SPYINRDQLSDIKVRA-GSNFEFDINVIGEPI--PTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAV 291 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~-g~~~~l~c~~~~~p~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a 291 (616)
+|.+.. +....+.. |+.+.|.|.+.+.|. +.+.|++++..+....... ....|.|.++...|.|.|+|.+
T Consensus 3 ~P~i~~--~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 3 EPRIVT--SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp CCEEEE--CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEE
T ss_pred CCcccc--cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEE
Confidence 455532 34455666 999999999999987 8999999999876543322 3458999999999999999999
Q ss_pred EcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeC--------CCCCEEEcccc
Q psy12426 292 KNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDM--------ETGRWVPMGDV 363 (616)
Q Consensus 292 ~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~--------~~~~~~~~~~~ 363 (616)
.|. |.....+.+.+..+|.....+.......+..+.|.|...... ...+.+..... ...........
T Consensus 76 ~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p----~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~ 150 (190)
T 2wv3_A 76 HFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYP----HPEWMWRKKENGVFEEISNSSGRFFIINKE 150 (190)
T ss_dssp EET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSS----CCEEEEEEEETTEEEECCCTTSCEEEEECS
T ss_pred EeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccC----CCceEEEEcCCCceeeeecCCCeEEEecCC
Confidence 999 888888888888776543222233456678899999863322 12222222111 11112221222
Q ss_pred ccceEEecccc-CCCeEEEEEEEEecCcCC
Q psy12426 364 SGTYTRAENLI-EGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 364 ~~~~~~i~~L~-~~~~y~~~v~a~n~~g~~ 392 (616)
....+.|.++. ..+.+.|.|.|.|..|..
T Consensus 151 ~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~ 180 (190)
T 2wv3_A 151 NYTELNIVNLQITEDPGEYECNATNSIGSA 180 (190)
T ss_dssp SEEEEEECSCCTTTSCEEEEEEEECSSCEE
T ss_pred CeeEEEEEeccccCCCEEEEEEEEecCCcc
Confidence 33478999999 799999999999998864
No 354
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.36 E-value=1.6e-11 Score=108.81 Aligned_cols=172 Identities=19% Similarity=0.200 Sum_probs=119.4
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeeccc-CcEEEEe-cCCceEEEecCCCCCCcEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISK-DRFKIVN-DDKSTKLKVFDSKRGDSGIYTLAV 291 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~-~~~~~~l~i~~l~~~~~g~y~c~a 291 (616)
.+|.|. ..+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++.+.. .+....|.|.++...|.|.|+|.+
T Consensus 3 ~~P~~~-~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 3 MAPHFK-EELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp CCCEEE-ECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCCEEE-EcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 456663 4457789999999999999999999999999999887643 4555443 455569999999999999999999
Q ss_pred EcCCCCceeeEEEEEecCCCCCCCC-----ccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCC-----CCCEEEcc
Q psy12426 292 KNSWGTDKGTAKVTVLDIPSPPEGP-----LKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDME-----TGRWVPMG 361 (616)
Q Consensus 292 ~n~~g~~~~~~~l~v~~~p~~p~~~-----~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~-----~~~~~~~~ 361 (616)
.|..|.......+.+..+|.....+ -......+..+.|.|...... .. .+.|...+ ........
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p----~p--~i~W~~~~~~~~~~~~~~~~~ 155 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKP----DP--VITWQKGQDLIDNNGHYQVIV 155 (197)
T ss_dssp EETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEES----CC--EEEEEESSCEECSSSSCEEEE
T ss_pred EECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecC----CC--cEEEEECCEEeecCCCEEEEE
Confidence 9998887778888876654322111 113344577788888753221 11 22222211 11111111
Q ss_pred ccccceEEecc-ccCCCeEEEEEEEEecCcCC
Q psy12426 362 DVSGTYTRAEN-LIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 362 ~~~~~~~~i~~-L~~~~~y~~~v~a~n~~g~~ 392 (616)
......+.|.+ +...+.+.|+|.|.|..|..
T Consensus 156 ~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~ 187 (197)
T 2j8h_A 156 TRSFTSLVFPNGVERKDAGFYVVCAKNRFGID 187 (197)
T ss_dssp CSSEEEEECTTCCCGGGCEEEEEEEEETTEEE
T ss_pred cCCceEEEEeCCCCcccCEeEEEEEEeCCCcE
Confidence 22345788888 99999999999999998864
No 355
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.36 E-value=7.9e-13 Score=118.14 Aligned_cols=117 Identities=18% Similarity=0.114 Sum_probs=63.5
Q ss_pred eecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEe-ccccCCCceeccCCcceEEEcCCeEEEEEEEeee-cC-ceeEEEE
Q psy12426 176 VLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA-RAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PI-PTKEWLC 252 (616)
Q Consensus 176 i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~-~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~-~~~~W~~ 252 (616)
|......|.|.|+|.|.|..+..... ..+.. .....+|.+....+....+ .|..+.|.|.+.|. |. +.+.|++
T Consensus 72 i~~~d~~d~g~Y~C~a~n~~~~~~~~---~~v~~~~~~~~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k 147 (207)
T 1l6x_A 72 VLHQDWLNGKEYKCKVSNKALPAPIE---KTISKAKGQPREPQVYTLPPSRDEL-TKNQVSLTCLVKGFYPSDIAVEWES 147 (207)
T ss_dssp CCHHHHHTTCCEEEEEECTTSSSCEE---EEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEHHHccCCceEEEEEEcCcCCcceE---EEeccCCCCCcCCEEEEECCChHHh-cCCcEEEEEEEeCeECCCeEEEEEE
Confidence 33333445788888888776542111 01110 0223455543322222112 45679999999985 44 4899999
Q ss_pred CCeeecccCcEEE--EecCC---ceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 253 NDITIISKDRFKI--VNDDK---STKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 253 ~~~~~~~~~~~~~--~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
++..+........ ..++. ...|.|......+.|.|+|.|.|...
T Consensus 148 ~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 148 NGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp TTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 9988753221111 11121 11334444444568999999999654
No 356
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.36 E-value=4.5e-11 Score=105.02 Aligned_cols=162 Identities=15% Similarity=0.229 Sum_probs=118.1
Q ss_pred CcceEEEcCCeEEEEEEEeeecCceeEEEE-CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-ee
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEPIPTKEWLC-NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KG 300 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~ 300 (616)
+.+..+.+|+.+.|.|.+.+.|. .+.|++ ++..+....++.+...+....|.|.++...|.|.|+|.+.|..|.. ..
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~ 87 (189)
T 2v44_A 9 LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEA 87 (189)
T ss_dssp CSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEE
T ss_pred CCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEE
Confidence 46678999999999999999887 899999 7777777788888777777899999999999999999999988876 56
Q ss_pred eEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeC-----CCCCEEEccccccceEEeccccC
Q psy12426 301 TAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDM-----ETGRWVPMGDVSGTYTRAENLIE 375 (616)
Q Consensus 301 ~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~-----~~~~~~~~~~~~~~~~~i~~L~~ 375 (616)
...+.+..+|.....+.......+..+.|.|...... ...+.+.+... ....... .....+.|.++..
T Consensus 88 ~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p----~p~v~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~ 160 (189)
T 2v44_A 88 TVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSP----APAVSWLYHNEEVTTISDNRFAM---LANNNLQILNINK 160 (189)
T ss_dssp EEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSS----CCEEEEEEEC--CEECCCTTEEE---CTTSCEEETTCCG
T ss_pred EEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCC----CCcEEEEECCcEEeccCCCCEEE---ecCCcEEEEEcCc
Confidence 7777887766543332233455677899999864322 12222222111 0111111 1234799999999
Q ss_pred CCeEEEEEEEEecCcCC
Q psy12426 376 GHDYNFRVKAVNKIGES 392 (616)
Q Consensus 376 ~~~y~~~v~a~n~~g~~ 392 (616)
.+.+.|+|.|.|..|..
T Consensus 161 ~d~G~Y~C~a~n~~~~~ 177 (189)
T 2v44_A 161 SDEGIYRCEGRVEARGE 177 (189)
T ss_dssp GGCEEEEEEEEETTTTE
T ss_pred ccCeEEEEEEEccccCc
Confidence 99999999999987653
No 357
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.36 E-value=1.9e-12 Score=116.54 Aligned_cols=129 Identities=11% Similarity=-0.025 Sum_probs=73.2
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCC--CCCCCCCCEEec-cccCCCceeccCCcceEEEcCCeEEEEEEEeeecCc
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPG--EPSDPTAPHIAR-AKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIP 246 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~--~~s~~~~~~~~~-~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~ 246 (616)
....|.|.+++++|.|.|.|.+.|..+.. ... ....+.+. ....+|.+....+.. .+..|+.+.|.|.+.+.+++
T Consensus 73 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~-~~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~l~C~~~~~~p~ 150 (215)
T 3nl4_H 73 TTVDLKITSPTTEDTATYFCVRKYGSEWGGDLWG-PGTLVTVSSGQPKAPSVFPLAPCC-GDTPSSTVTLGCLVKGYLPE 150 (215)
T ss_dssp SEEEEEESSCCGGGCEEEEEEEECSSSSCEEEEC-CCEEEEECSSCCBCCEEEEECCCT-TCCC--CEEEEEEEEEEBSS
T ss_pred CEEEEEECCCCcccCEEEEEEEecCCCccceEEc-CCEEEEEeCCCcCCCEEEEecCCc-cccCCCcEEEEEEEeeeeCC
Confidence 34479999999999999999999875420 011 11123333 223456553222222 34579999999999997543
Q ss_pred --eeEEEECCeeecccCcEEEEecCCceEEEe---cCCCCCCcEEEEEEEEcCCCCceeeEE
Q psy12426 247 --TKEWLCNDITIISKDRFKIVNDDKSTKLKV---FDSKRGDSGIYTLAVKNSWGTDKGTAK 303 (616)
Q Consensus 247 --~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i---~~l~~~~~g~y~c~a~n~~g~~~~~~~ 303 (616)
.+.|++++..+...........++ .+.+ ..+...| |.|+|.|.|..|.......
T Consensus 151 ~~~v~W~~~g~~~~~~~~~~~~~~~g--~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~ 209 (215)
T 3nl4_H 151 PVTVTWNSGTLTNGVRTFPSVRQSSG--LYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKT 209 (215)
T ss_dssp CCEEEEGGGTBCTTEEECCCEECTTS--CEEEEEEEEECC----CCEEEEEEGGGTEEEEEE
T ss_pred CeEEEEeeCCEECCeEecCceECCCC--CEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEe
Confidence 577999886443211111111111 2222 4455556 9999999998776554443
No 358
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.35 E-value=1.3e-12 Score=98.93 Aligned_cols=79 Identities=22% Similarity=0.294 Sum_probs=64.7
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||+|. .+++++.|.+|+.+.|.|.+.+ |.|.|+|+|||..|..+++|.....
T Consensus 5 ~~~~~-~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~-------------------------- 56 (93)
T 1waa_A 5 LIEVE-KPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIED-------------------------- 56 (93)
T ss_dssp CCCEE-ECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEE--------------------------
T ss_pred CcEee-ccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEE--------------------------
Confidence 45565 5699999999999999999987 4578999999999987777755421
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKG 109 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~ 109 (616)
+....|.|.++...|+|.|.|.|.|..
T Consensus 57 --g~~~~L~I~~v~~~D~G~Y~C~a~n~~ 83 (93)
T 1waa_A 57 --GKKHILILHNCQLGMTGEVSFQAANTK 83 (93)
T ss_dssp --TTEEEEEECSCCGGGCEEEEEEETTEE
T ss_pred --CCEEEEEECCCChhhCEEEEEEECCCc
Confidence 123579999999999999999998753
No 359
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=3.6e-12 Score=101.29 Aligned_cols=98 Identities=20% Similarity=0.285 Sum_probs=74.5
Q ss_pred cCCEEccCCCCCCC-CCCCCEEEEecCCeEEEEecCCCC-CCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCC
Q psy12426 398 QSPITAKDPFGRPD-RPGQPTVTDWGKDHVDLEWTPPKK-DGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLK 474 (616)
Q Consensus 398 s~~~~~~~~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~-~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~ 474 (616)
+..+.+.+...+|. +|.++++.. +.+++.|+|++|.. ..++.|.+|+|+|+..+. .+. .. ......+.+. |.
T Consensus 6 S~~v~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~-~~--~~~~~~~~~~-L~ 80 (117)
T 1wj3_A 6 SGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQ-VL--NTNKTSAELV-LP 80 (117)
T ss_dssp CCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCE-EE--EESSSEEEEE-CC
T ss_pred CCCEEEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCe-EE--eCCCcEEEEE-CC
Confidence 45566677777777 567788766 88999999998742 344579999999988765 332 22 2234577888 99
Q ss_pred CCCeEEEEEEEEcCCCCCCCCCCCCC
Q psy12426 475 EGEEYEFRVIAVNKGGPGEPSKASAP 500 (616)
Q Consensus 475 p~t~Y~~~v~a~n~~G~g~~s~~~~~ 500 (616)
+++.|.|+|+|+|..|.|++|....+
T Consensus 81 ~~t~Y~~~V~A~n~~G~Gp~S~~v~~ 106 (117)
T 1wj3_A 81 IKEDYIIEVKATTDGGDGTSSEQIRI 106 (117)
T ss_dssp CSSCEEEEEEEEESSCCCCBCCCEEE
T ss_pred CCCEEEEEEEEECCCccCCCCCCEEE
Confidence 99999999999999999999875543
No 360
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.35 E-value=3.3e-11 Score=106.37 Aligned_cols=176 Identities=17% Similarity=0.202 Sum_probs=121.3
Q ss_pred CCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEe-----CCCCCEEEcc---ccccceEEecc-ccCCCeEEEE
Q psy12426 312 PPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMD-----METGRWVPMG---DVSGTYTRAEN-LIEGHDYNFR 382 (616)
Q Consensus 312 ~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~-----~~~~~~~~~~---~~~~~~~~i~~-L~~~~~y~~~ 382 (616)
+|.+ +.+...... ..|.|+++.. ......|.++|.. .+...|.... ....+.+.|.. +..+..|.+|
T Consensus 9 ~P~n-v~~~s~n~~-~iL~W~p~~~--~~~~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~~R 84 (206)
T 4doh_B 9 APQQ-LSVLSTNMK-HLLMWSPVIA--PGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLR 84 (206)
T ss_dssp CCCC-CEEEEETTE-EEEECCCCCC--SSSCCEEEEEEEEHHHHHHSTTCCEEEEEEEEESSSEEECTTTCCSSSCEEEE
T ss_pred CCCe-eEEEEeCCE-EEEEECCCCC--CCCCEEEEEEEEEeccccCCCccceecccccCCCCCEEcCCccccCCCCEEEE
Confidence 3555 666665554 7999997642 2234789999984 3556787643 34567788884 6678899999
Q ss_pred EEEEecCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEee
Q psy12426 383 VKAVNKIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIV 461 (616)
Q Consensus 383 v~a~n~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~ 461 (616)
|+|.+..+.+.++......... ...+++| .+.+. ....+|.|.|.+| ..+..|.|.|.+.++ .-......
T Consensus 85 VrA~~~~~~S~w~~~~~f~~~~--~t~i~PP-~v~v~-~~~~~i~V~~~~p-----~~~l~Y~v~y~~~~~~~~~~~~~~ 155 (206)
T 4doh_B 85 VRATLGSQTSAWSILKHPFNRQ--STILTRP-GMEIT-KDGFHLVIELEDL-----GPQFEFLVAYWRREPGAEEHVKMV 155 (206)
T ss_dssp EEEEETTEECCCEECSSCBCGG--GCBCCCC-CEEEE-EETTEEEEEECCC-----CTTCEEEEEEEESSSSCCCEEEEE
T ss_pred EEEEcCCCccCccccccccchh--hcccCCC-eEEEE-eCCCEEEEEecCC-----CCcEEEEEEEEEcCCCceeEEeEE
Confidence 9999988887765433222111 2334444 46666 5788999999976 247789999988765 22222333
Q ss_pred cCCccEEEcCCCCCCCeEEEEEEEEcC--CCCCCCCCCCCC
Q psy12426 462 PANITATSVPDLKEGEEYEFRVIAVNK--GGPGEPSKASAP 500 (616)
Q Consensus 462 ~~~~~~~~l~~L~p~t~Y~~~v~a~n~--~G~g~~s~~~~~ 500 (616)
......++|.+|.|++.|.|+|+|... .|.|.+|....+
T Consensus 156 ~~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C~ 196 (206)
T 4doh_B 156 RSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECV 196 (206)
T ss_dssp CCSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEEE
T ss_pred ccCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEeE
Confidence 344678999999999999999999985 377888875443
No 361
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=2.4e-12 Score=101.22 Aligned_cols=92 Identities=26% Similarity=0.311 Sum_probs=71.1
Q ss_pred CCCCCCC-CCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEE
Q psy12426 408 GRPDRPG-QPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIA 485 (616)
Q Consensus 408 ~~p~~p~-~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a 485 (616)
.+|.+|. ++....++.+++.|.|.+|..++ .+|.+|.|+|+..+. .|..... +....++|.+|.|++.|.|||+|
T Consensus 8 ~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~v~~L~p~t~Y~frV~A 84 (110)
T 2db8_A 8 PVPATPILQLEECCTHNNSATLSWKQPPLST-VPADGYILELDDGNGGQFREVYV--GKETMCTVDGLHFNSTYNARVKA 84 (110)
T ss_dssp CCCCCCBCCCCCCSCSSSEEEECCBCCTTCC-SCCSEEEEEECCSSSSCCEEEEE--ESCSCEEEECCCSSSCCEEEEEE
T ss_pred CCCCCccccceeeccCCCEEEEEECCCCCCC-CCccEEEEEEEeCCCCceEEEEe--CCcCEEEECCCCCCCEEEEEEEE
Confidence 3455553 44444567899999999876554 679999999988664 7776542 35678999999999999999999
Q ss_pred EcCCCCCCCCCCCCCEE
Q psy12426 486 VNKGGPGEPSKASAPVT 502 (616)
Q Consensus 486 ~n~~G~g~~s~~~~~~~ 502 (616)
+|..|.|++|......|
T Consensus 85 ~n~~G~s~~S~~~~~~T 101 (110)
T 2db8_A 85 FNKTGVSPYSKTLVLQT 101 (110)
T ss_dssp ECSSCBCCCCSCEECCC
T ss_pred EeCCcCCCCCCCEEEEc
Confidence 99999999987654433
No 362
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.35 E-value=5.5e-12 Score=113.43 Aligned_cols=147 Identities=12% Similarity=0.095 Sum_probs=102.8
Q ss_pred CCCCCCCCCEEEEe-cCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--C-----ceEeEe-ecCCccEEEcCCCCCCCe
Q psy12426 408 GRPDRPGQPTVTDW-GKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--P-----WEKACI-VPANITATSVPDLKEGEE 478 (616)
Q Consensus 408 ~~p~~p~~~~~~~~-~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~-----~~~~~~-~~~~~~~~~l~~L~p~t~ 478 (616)
.+|++|.++.+... ..+++.++|+++.. ++. ...|.|+|+..+. . +..+.. .......+.+.+|.+++.
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~-~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 80 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPE-THL-PTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQY 80 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSC-CSS-CCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSC
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCCC-CCC-ceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceE
Confidence 57888989988777 68899999997643 444 4569999987653 1 222221 122346788899999999
Q ss_pred EEEEEEEEcCCCCCCCCCCCCCEEeccCcCCCeeccccccceeeeeecceeEEEeeCeeeeccccccceeeeeeeecCCC
Q psy12426 479 YEFRVIAVNKGGPGEPSKASAPVTCKPRFVAPVIDQYALQDMTAQEYNPFITLLFKNFVLDLNEGLKSMVKLSYIDNVPG 558 (616)
Q Consensus 479 Y~~~v~a~n~~G~g~~s~~~~~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (616)
|.|+|.|.|..|.+. +.. ...... ....|+
T Consensus 81 Y~~~V~A~N~~G~~~-s~~---~~~~~~----------------------------------------------~~v~p~ 110 (215)
T 1cd9_B 81 MAIWVQAENMLGSSE-SPK---LCLDPM----------------------------------------------DVVKLE 110 (215)
T ss_dssp EEEEEEEEETTEEEE-CCC---EEECGG----------------------------------------------GGBCCC
T ss_pred EEEEEEEECCCCCcc-Ccc---EEEchH----------------------------------------------HceEeC
Confidence 999999999999763 211 111110 013477
Q ss_pred CCCCCeEEee------cCCcEEEEeeCCCCCCCCceeeeEEEEe-ecCCCCeEEcc
Q psy12426 559 KPSKPEATDV------DKDHIKIKWQQPISNGGSAIKGYEVERR-ERTSGRWIKIT 607 (616)
Q Consensus 559 ~P~~~~~~~~------~~~~i~l~W~~p~~~~~~~i~~Y~i~~~-~~~~~~w~~~~ 607 (616)
+|.++.+... +.+++.|+|++|... +..+.+|+|.|+ ..++.+|..+.
T Consensus 111 pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~-~~~~l~Y~v~y~~~~~~~~w~~~~ 165 (215)
T 1cd9_B 111 PPMLQALDIGPDVVSHQPGCLWLSWKPWKPS-EYMEQECELRYQPQLKGANWTLVF 165 (215)
T ss_dssp CCEEEECCC-------CCSCEEEEEECCGGG-TTSCEEEEEEEEESSTTCCCEEEE
T ss_pred CCcEEEEEEeccccCCCCCeEEEEEeCCCCC-CeEEEEEEEEEccCCCCCCcEEEe
Confidence 8888776655 678899999998643 344589999999 77888998753
No 363
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.34 E-value=1.8e-12 Score=101.02 Aligned_cols=85 Identities=19% Similarity=0.314 Sum_probs=70.2
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|. ..+.++.+.+|+.+.|.|.+.|.|.|.|+|+|++..+.....|.....
T Consensus 8 ~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~-------------------------- 60 (103)
T 3qp3_A 8 APRIT-LRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNT-------------------------- 60 (103)
T ss_dssp EEEEE-ECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEE--------------------------
T ss_pred CCEEE-eCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEEC--------------------------
Confidence 46666 348899999999999999999999999999999999886666654421
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 114 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~ 114 (616)
.....|.|.++...|.|.|.|.|.|..|....
T Consensus 61 --~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~ 92 (103)
T 3qp3_A 61 --SGVLTLEILDCHTDDSGTYRAVCTNYKGEASD 92 (103)
T ss_dssp --TTEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred --CCEEEEEEcCCCcccCEEEEEEEEeCCCcEEE
Confidence 12357999999999999999999999886543
No 364
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.34 E-value=2.3e-12 Score=99.59 Aligned_cols=86 Identities=19% Similarity=0.300 Sum_probs=68.8
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|.. .+.++.+.+|+.+.|.|.+.|.|.|.|+|+|+|..+.....+.-...
T Consensus 5 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~-------------------------- 57 (99)
T 1g1c_A 5 APKIFE-RIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWP-------------------------- 57 (99)
T ss_dssp EEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEE--------------------------
T ss_pred CCceEe-cCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEc--------------------------
Confidence 466764 48899999999999999999999999999999998875444432210
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 114 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~ 114 (616)
......|.|.++...|.|.|.|.|.|..|....
T Consensus 58 -~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~ 90 (99)
T 1g1c_A 58 -EDNVCELVIRDVTGEDSASIMVKAINIAGETSS 90 (99)
T ss_dssp -ETTEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred -CCCEEEEEECCCCcCCCEEEEEEEEECCCcEEE
Confidence 112357999999999999999999999886543
No 365
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.34 E-value=1.4e-11 Score=116.57 Aligned_cols=206 Identities=5% Similarity=-0.066 Sum_probs=116.5
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCc--ceEEEcCCeEEEEEEEeeecCceeE
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLS--DIKVRAGSNFEFDINVIGEPIPTKE 249 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~--~~~v~~g~~~~l~c~~~~~p~~~~~ 249 (616)
..|.|.+++..|.|.|+|.|.|..|..........+.+.. +..|.+ ...+. .+.+.+|+.+.|.|.+. .|.+.+.
T Consensus 51 ~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~-p~~~~~-~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~ 127 (289)
T 3mjg_X 51 SVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPD-PTVGFL-PNDAEELFIFLTEITEITIPCRVT-DPQLVVT 127 (289)
T ss_dssp EEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCC-TTCCBC-CCCHHHHEEEESSCCCEEECCCBS-CTTSCEE
T ss_pred EEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEEC-CCcCcc-cCCCCcceEEeecCCeEEEEeEcC-CCCceEE
Confidence 5899999999999999999999887522221122222221 122222 11111 16788999999999998 7788899
Q ss_pred EEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eeeEEEEEecCCCCCC---CCccceeecCC
Q psy12426 250 WLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAKVTVLDIPSPPE---GPLKPSNITKS 325 (616)
Q Consensus 250 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~l~v~~~p~~p~---~~~~~~~~~~~ 325 (616)
|++++........ .. ... .+. ...|.|.|+|.|.|..+.. .....+.+... .+|. .+.......+.
T Consensus 128 w~~~~~~~~~~~~--~~--~~~-~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~-~~p~i~~~~~~~~v~~G~ 197 (289)
T 3mjg_X 128 LHEKKGDVALPVP--YD--HQR-GFS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV-SSINVSVNAVQTVVRQGE 197 (289)
T ss_dssp EEESSCCSCCCCC--EE--TTT-EEE----ECCCSSEEEEEEEETTEEEECCCEEEEECCC-CCCCCEEEESCSEEETTS
T ss_pred EEeCCCCCcccee--ec--CCc-Cee----eeccCcEEEEEEEeCCceeeeeeEEEEecCC-CCCCcEEeCCcceeEcCC
Confidence 9987522111111 11 111 121 2468999999999866543 33345555542 2221 11113345678
Q ss_pred eEEEEEeCCCCCCCCceEEEEEEEEe--CCC-CC-EEEcc----ccccceEEeccccCCCeEEEEEEEEecCcCCCC
Q psy12426 326 SCNLEWRAPRDDGGTDILHYVVEKMD--MET-GR-WVPMG----DVSGTYTRAENLIEGHDYNFRVKAVNKIGESLP 394 (616)
Q Consensus 326 ~~~l~W~~~~~~~~~~i~~y~v~~~~--~~~-~~-~~~~~----~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~ 394 (616)
.+.|.|..... +...+.+.+.. .+. .. ..... ......+.|.++...+.+.|+|.|.|..|....
T Consensus 198 ~v~L~C~~~g~----p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 270 (289)
T 3mjg_X 198 NITLMCIVIGN----EVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQD 270 (289)
T ss_dssp CEEEEEEEESC----SSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEE
T ss_pred CEEEEEEECCC----CCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCcee
Confidence 89999986332 22223332111 111 11 11110 123467899999999999999999999997543
No 366
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.34 E-value=1.3e-12 Score=96.48 Aligned_cols=72 Identities=19% Similarity=0.269 Sum_probs=60.6
Q ss_pred CCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccccCCCCCc
Q psy12426 8 HLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTEGDTPK 87 (616)
Q Consensus 8 ~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~~~~~~ 87 (616)
++.++.+.+|+++.|.|.+.| |.|.|+|+|||.+|..++.|.... ......
T Consensus 2 ~lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~----------------------------~~~~~~ 52 (84)
T 2lu7_A 2 HMTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQ----------------------------AGARQV 52 (84)
T ss_dssp -CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEE----------------------------CSSCEE
T ss_pred CCeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEee----------------------------cCCeEE
Confidence 478899999999999999976 999999999999998777776553 223457
Q ss_pred eEecCcccCCeEEEEEEEEcC
Q psy12426 88 GKVLDLIEGNQYEFRVLAVNK 108 (616)
Q Consensus 88 l~i~~l~~~~~~~y~c~a~n~ 108 (616)
|.|.++...|.|.|.|.|.|.
T Consensus 53 L~I~~~~~~D~G~Y~C~a~n~ 73 (84)
T 2lu7_A 53 LRVQGARSGDAGEYLCDAPQD 73 (84)
T ss_dssp EEESSCSSTTCEEEEEECTTT
T ss_pred EEecCCCCcccEEEEEEECCE
Confidence 999999999999999998553
No 367
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.34 E-value=3.9e-12 Score=117.18 Aligned_cols=122 Identities=16% Similarity=0.072 Sum_probs=64.5
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCC---------C--CCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGP---------G--EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDI 238 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~---------~--~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c 238 (616)
...|.|.+++.+|.|.|.|.+.+..|. . .... ...+.+.. ...+|.+....+.. .+..|+.+.|.|
T Consensus 78 ~~sL~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~-~t~L~V~~~~~~~P~v~~~~p~~-~~~~g~~v~L~C 155 (257)
T 3bn9_D 78 TLYLQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQ-GTMVTVSSASTKGPSVFPLAPSS-KSTSGGTAALGC 155 (257)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECC-CEEEEECSSCCBCCEECCCCC------------CCC
T ss_pred EEEEEECCCChhhCEEEEEEEecCCCcccccccccceeeeeCC-cEEEEecCCCCcCCcEEEecCcc-cccCCCcEEEEE
Confidence 347999999999999999999987651 0 0111 11233332 23456654333222 356799999999
Q ss_pred EEeee-cCc-eeEEEECCeeecccCcEEEEecCC----ceEEEecCCCCCCcEEEEEEEEcCC
Q psy12426 239 NVIGE-PIP-TKEWLCNDITIISKDRFKIVNDDK----STKLKVFDSKRGDSGIYTLAVKNSW 295 (616)
Q Consensus 239 ~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~l~~~~~g~y~c~a~n~~ 295 (616)
.+.+. |.+ .+.|++++..+.......+...++ ...|.|.+....+ |.|+|.|.|..
T Consensus 156 ~~~g~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~ 217 (257)
T 3bn9_D 156 LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKP 217 (257)
T ss_dssp EEEEEBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGG
T ss_pred EEeeEECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecC
Confidence 99986 776 999999987532110000111111 1357777777767 99999999954
No 368
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.34 E-value=4.7e-12 Score=118.14 Aligned_cols=226 Identities=11% Similarity=0.022 Sum_probs=139.1
Q ss_pred cccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeec-Cccc--ccEEEEeeccCcccccccCCCceEecccCC
Q psy12426 93 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVG-TLLK--DSIYEQLKRSGLFDQFHLCPIWEKCAQTEG 169 (616)
Q Consensus 93 l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g-~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (616)
+.+|+...+.|.+. | .|.+ .+.|++ ++..+. . .. . .
T Consensus 15 v~~G~~v~l~C~~~----------------------------g~~p~p~~~v~W~k--~~~~l~-----~---~~-~--~ 53 (265)
T 2oz4_A 15 LEVDTQGTVVCSLD----------------------------GLFPVSEAQVHLAL--GDQRLN-----P---TV-T--Y 53 (265)
T ss_dssp EETTEEEEEEEEEE----------------------------SCSCGGGCEEEEEE--TTEECC-----C---EE-E--E
T ss_pred EecCCCEEEEEEcc----------------------------CCCCCcceEEEEEe--CCEECC-----c---eE-e--e
Confidence 56789999999987 4 4555 799998 522211 0 11 1 1
Q ss_pred CCCeEEeecc---cCCCeE--EEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeec
Q psy12426 170 DTPKGKVLDL---IEGNQY--EFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEP 244 (616)
Q Consensus 170 ~~~~l~i~~l---~~~~~~--~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p 244 (616)
....+.+..+ ...|.| .|+|.|.|..|....+ ..+.+... .+|.+. +....+.+|+.+.|.|.+. |
T Consensus 54 ~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~---~~l~V~~~-p~p~~~---~~~~~v~~G~~v~l~C~~~--p 124 (265)
T 2oz4_A 54 GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETL---QTVTIYSF-PAPNVI---LTKPEVSEGTEVTVKCEAH--P 124 (265)
T ss_dssp CSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEE---EEEEEECC-CCCEEE---ESCSEEETTCEEEEEEECC--T
T ss_pred CCCeEEEEeecccccccCCcceEEEEEecCCCCcEEE---EEEEEeCC-CCceee---cCCceecCCCcEEEEEEcc--C
Confidence 1225555555 556666 5999999988763311 12222221 124443 3456688999999999998 8
Q ss_pred CceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc-CCCCce---eeEEEEEecCCCCCCC--Ccc
Q psy12426 245 IPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN-SWGTDK---GTAKVTVLDIPSPPEG--PLK 318 (616)
Q Consensus 245 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n-~~g~~~---~~~~l~v~~~p~~p~~--~~~ 318 (616)
.+.+.| ++..+... +....|.|..+...|.|.|+|.|.| ..|... ....+.+..+|..... +-.
T Consensus 125 ~~~i~W--~g~~~~~~--------~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~ 194 (265)
T 2oz4_A 125 RAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGN 194 (265)
T ss_dssp TSEEEE--SSCSSSCC--------SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSE
T ss_pred CCEEEE--CCEEccCC--------CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCc
Confidence 899999 77665221 2234688899999999999999985 446654 5667777776654332 112
Q ss_pred ceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 319 PSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 319 ~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
.....+..+.|.|..... +.. .+.|...+. . ..... .+ ..+...+.+.|+|.|.|..|..
T Consensus 195 ~~v~~g~~~~l~C~~~g~----P~p--~i~W~~~~~---~-~~~~g--~~--~~v~~~d~G~Y~C~a~N~~G~~ 254 (265)
T 2oz4_A 195 WTWPENSQQTPMCQAWGN----PLP--ELKCLKDGT---F-PLPIG--ES--VTVTRDLEGTYLCRARSTQGEV 254 (265)
T ss_dssp EEEETTCEECCCCCCEEE----SCC--EEEEEETTT---E-ECCTT--SC--EECCGGGCEEEEEEEEETTEEE
T ss_pred cEEcCCCeEEEEeECccC----CCC--eEEEEECCc---c-cCCCC--cE--EEeehhhCeEEEEEEECCCCcE
Confidence 344567888888875222 112 233333222 1 11111 11 2356678899999999988864
No 369
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=3.3e-12 Score=99.08 Aligned_cols=86 Identities=17% Similarity=0.255 Sum_probs=72.1
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEc
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVN 487 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n 487 (616)
.++.+|.++++..++.+++.|+|.+|. +.|.+|+|+|+..++.+.....+.++..+++|.+|.|++.|.|+|.|+|
T Consensus 6 ~p~~pP~~l~~~~vt~tsi~vsW~pp~----~~i~~Y~I~y~~~~~~~~~~~~v~~~~t~~~l~~L~p~T~Y~v~V~A~~ 81 (108)
T 2ee3_A 6 SGLAPPRHLGFSDVSHDAARVFWEGAP----RPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLY 81 (108)
T ss_dssp CCCCCSSCEEEESCCSSCEEEEESCCS----SCCSEEEEEEEETTTCCBCCEEEETTCCEEEECSCCSSCEEEEEEEEEC
T ss_pred cCCCCCceEEEEEccCCeEEEEeeCCC----CCccEEEEEEEeCCCCceeEEEcCCCcCEEEcCCCCCCCEEEEEEEEEe
Confidence 456789999999999999999999763 3699999999887653333345567788999999999999999999999
Q ss_pred CCCCCCCCCC
Q psy12426 488 KGGPGEPSKA 497 (616)
Q Consensus 488 ~~G~g~~s~~ 497 (616)
..|.|+++..
T Consensus 82 ~~g~s~p~~~ 91 (108)
T 2ee3_A 82 PGGGSSTLTG 91 (108)
T ss_dssp TTSCEEEEEE
T ss_pred CCCcCCCccC
Confidence 9999987653
No 370
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.34 E-value=1.1e-11 Score=109.28 Aligned_cols=169 Identities=18% Similarity=0.258 Sum_probs=117.3
Q ss_pred CCceecc-CCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 215 SPYINRD-QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 215 ~P~~~~~-~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
||.+... .+.++.+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+... ...|.|.++...|.|.|+|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGS--NTELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETT--TTEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCC--eeEEEEecCChhcCcEEEEEEEc
Confidence 4555422 23457788999999999999999999999999999887777765433 34899999999999999999999
Q ss_pred CCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC------------CCEEEcc
Q psy12426 294 SWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET------------GRWVPMG 361 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~------------~~~~~~~ 361 (616)
..|.......+.+..+|..... .......+..+.|.|..... +... +.|..... .......
T Consensus 80 ~~~~~~~~~~l~V~~~p~~~~~-~~~~~~~g~~v~l~C~~~~~----p~~~--v~W~~~~~~~~~~~~~~~~~~~~~~~~ 152 (192)
T 2va4_A 80 KAGEDEKQAFLQVFVQPHIIQL-KNETTYENGQVTLVCDAEGE----PIPE--ITWKRAVDGFTFTEGDKSLDGRIEVKG 152 (192)
T ss_dssp TTEEEEEEEEEEEEEEEEEEEE-CCEEECTTSEEEEEEEEEEE----SCCE--EEEEETTTTEEECTTCBCTTSCEEEEE
T ss_pred cccccceEEEEEEEccCccccc-CcceEEeCCeEEEEEEecCC----CCCc--EEEEeCCCCceeeccccccCCcEEEee
Confidence 8888777777777665543221 11233447788899975322 1112 23322211 1111111
Q ss_pred ccccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 362 DVSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 362 ~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
......+.|.++...+.+.|+|.|.|..|..
T Consensus 153 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 183 (192)
T 2va4_A 153 QHGSSSLHIKDVKLSDSGRYDCEAASRIGGH 183 (192)
T ss_dssp ETTEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred ccCceEEEEecCCcccCEEEEEEEEecCCce
Confidence 1224578899999999999999999998863
No 371
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=7.5e-12 Score=96.33 Aligned_cols=92 Identities=25% Similarity=0.336 Sum_probs=79.8
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
+|.| ...+.++.+.+|+.+.|.|.+ .|.+.+.|++++..+..+.++.+...+....|.|.++..+|.|.|+|.|.|.
T Consensus 7 p~~~-~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 7 GLKI-LTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCC-SBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred CCEE-eccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 4455 455678899999999999999 8889999999999998888998888888889999999999999999999997
Q ss_pred CCCceeeEEEEEecCCC
Q psy12426 295 WGTDKGTAKVTVLDIPS 311 (616)
Q Consensus 295 ~g~~~~~~~l~v~~~p~ 311 (616)
....++.|.|..+|.
T Consensus 84 --~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 84 --NVTLPAKVHVISGPS 98 (100)
T ss_dssp --CCCEEEEEEEECCSC
T ss_pred --CeeEEEEEEEeCCCC
Confidence 556778888887764
No 372
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.34 E-value=1.2e-11 Score=96.35 Aligned_cols=94 Identities=23% Similarity=0.391 Sum_probs=82.1
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
+|.|. ..+.+..+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|.
T Consensus 8 ~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 86 (103)
T 3qp3_A 8 APRIT-LRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNY 86 (103)
T ss_dssp EEEEE-ECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEEE-eCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeC
Confidence 45553 34577889999999999999999999999999999988888888877777789999999999999999999999
Q ss_pred CCCceeeEEEEEecC
Q psy12426 295 WGTDKGTAKVTVLDI 309 (616)
Q Consensus 295 ~g~~~~~~~l~v~~~ 309 (616)
.|.....+.|.|...
T Consensus 87 ~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 87 KGEASDYATLDVTGG 101 (103)
T ss_dssp TEEEEEEEEEEEECC
T ss_pred CCcEEEEEEEEEECC
Confidence 999888888887653
No 373
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.33 E-value=9.5e-12 Score=115.12 Aligned_cols=123 Identities=14% Similarity=0.032 Sum_probs=76.7
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCCC-CCCCCCCCEEecc-ccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc-e
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGPG-EPSDPTAPHIARA-KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP-T 247 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~~-~~s~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~-~ 247 (616)
..|.|.+++.+|.|.|.|.+.|..+.. .... ...+.+.. ...+|.+....+.. .+..|+.+.|.|.+.+. |.+ .
T Consensus 85 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~-~~~L~V~~~~~~~P~v~~~~p~~-~v~~g~~v~L~C~~~g~~P~~i~ 162 (261)
T 2xqy_G 85 VYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQ-GTTLTVSSAKTTAPSVYPLAPVC-GDTTGSSVTLGCLVKGYFPEPVT 162 (261)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSSEEEECC-CEEEEECSSCCBCCEEEEECCCC-C--CCSEEEEEEEEEEEBSSCCE
T ss_pred EEEEEcCCCcccCeEEEEEEecCCCcceEECC-CEEEEEccCCCCCCeEEEeCCCc-cccCCCcEEEEEEEEeEeCCCCE
Confidence 479999999999999999999864211 1111 11233332 22455554322222 35679999999999985 666 9
Q ss_pred eEEEECCeeecccCcEEEEecC---CceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 248 KEWLCNDITIISKDRFKIVNDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 248 ~~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
+.|++++..+.......+...+ ....|.|......+ |.|+|.|.|....
T Consensus 163 v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 163 LTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 214 (261)
T ss_dssp EEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred EEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCC
Confidence 9999988754211000011111 12478898888878 9999999995433
No 374
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.33 E-value=1.8e-11 Score=105.95 Aligned_cols=111 Identities=12% Similarity=0.061 Sum_probs=70.0
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLC 252 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~ 252 (616)
.|.|.+++..|.|.|+|.|.|..|..... ....+.+......|.+. ..+..+.|.|.+.+.|.+.+.|++
T Consensus 67 sL~I~~v~~~DsG~Y~c~~~n~~g~~~~~-~~~~L~V~~~~~~P~i~---------~~~~~v~L~C~~~~~p~~~~~W~~ 136 (182)
T 1hnf_A 67 TLKIKHLKTDDQDIYKVSIYDTKGKNVLE-KIFDLKIQERVSKPKIS---------WTCINTTLTCEVMNGTDPELNLYQ 136 (182)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTSCEEEE-EEEEEEEECCCCCCEEE---------EETTTTEEEEECSSCSSCEEEEEE
T ss_pred CEEECCCChhhCEEEEEEEEeCCCceeEE-EEEEEEEcCcCCCCEEE---------EccCcEEEEeEccCCCCCEEEEEE
Confidence 67777777777777777777766542210 00112222222334332 123368899999999999999999
Q ss_pred CCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy12426 253 NDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 304 (616)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l 304 (616)
++..+ ... . ..+.+.. ...|.|.|+|.|.|..|.......+
T Consensus 137 ~g~~l-~~~-------~--~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 137 DGKHL-KLS-------Q--RVITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp SSCEE-EEE-------S--SCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred CCEEC-CCC-------C--cEEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 99877 211 1 1233322 4679999999999998877655544
No 375
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.33 E-value=1.6e-12 Score=118.55 Aligned_cols=120 Identities=14% Similarity=0.042 Sum_probs=69.6
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEe-ccccCCCceeccCCcceEEEcCCeEEEEEEEeee-cC-ceeE
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIA-RAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PI-PTKE 249 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~-~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~-~~~~ 249 (616)
.|.|.+++.+|.|.|+|.|.|..|..... ..+.. .....+|.+....+... ...|+.+.|.|.+.|. |. ..+.
T Consensus 83 ~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~---~~v~~~~~~~~~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~ 158 (239)
T 1i1c_A 83 ELPIVERDWLNGKTFKCKVNSGAFPAPIE---KSISKPEGTPRGPQVYTMAPPKE-EMTQSQVSITCMVKGFYPPDIYTE 158 (239)
T ss_dssp EEECCHHHHHTTCCEEEEEECSSSSSCEE---EEECCCSSCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEEhhHccCCCeEEEEEecccCCCCcE---EEEecCCCCCcCCEEEEECCChH-HhcCCcEEEEEEEeeeECCCeEEE
Confidence 57788888888888888888876643211 01110 12234565543222211 1247889999999985 44 4899
Q ss_pred EEECCeeecccCcEE--EEecCCc---eEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 250 WLCNDITIISKDRFK--IVNDDKS---TKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 250 W~~~~~~~~~~~~~~--~~~~~~~---~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
|+++|..+....... ...++.- +.|.|......+.|.|+|.|.|...
T Consensus 159 W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 159 WKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp EEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEECCEECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 999998874322111 1111211 1233433333468999999999653
No 376
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.33 E-value=6.3e-12 Score=110.85 Aligned_cols=168 Identities=19% Similarity=0.265 Sum_probs=115.8
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecc-cCcEEEEecCCceEEEecCCCCCCcEEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS-KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
.+|.| ...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+...+ ..|.|.++...|.|.|+|.+.
T Consensus 6 ~~P~i-~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 6 KAPVI-TTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG--QLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp EEEEE-SSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGG--TEEEESSCCGGGCEEEEEEEE
T ss_pred CCcee-ecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCc--cEEEEcCCCcccCeEEEEEEE
Confidence 44555 3445678899999999999999999999999999988764 4566555443 379999999999999999999
Q ss_pred cCCCCc-eeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC----CCEEEccccccce
Q psy12426 293 NSWGTD-KGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET----GRWVPMGDVSGTY 367 (616)
Q Consensus 293 n~~g~~-~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~----~~~~~~~~~~~~~ 367 (616)
|..|.. .....+.+..+|.....+.......+..+.|.|..... +... +.|...+. ...... .....
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~----p~~~--v~W~~~~~~~~~~~~~~~--~~~~~ 154 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGN----PKPS--VSWIKGDSALRENSRIAV--LESGS 154 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEE----SCCE--EEEEETTEECCCCSSEEE--CTTSC
T ss_pred cCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEecc----CCce--EEEEeCCEEccCCCcEEE--ecCCc
Confidence 988773 45566666655543322223445567788888875322 1112 22222111 110111 12346
Q ss_pred EEeccccCCCeEEEEEEEEecCcCC
Q psy12426 368 TRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 368 ~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
+.|.++...+.+.|+|.|.|..|..
T Consensus 155 L~i~~~~~~d~G~Y~C~a~n~~g~~ 179 (192)
T 2iep_A 155 LRIHNVQKEDAGQYRCVAKNSLGTA 179 (192)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEE
T ss_pred EEEecCChhhCEEEEEEEEcCCCcE
Confidence 8999999999999999999998865
No 377
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.33 E-value=4.9e-12 Score=114.99 Aligned_cols=119 Identities=13% Similarity=0.052 Sum_probs=68.8
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEeee-c-Cce
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-P-IPT 247 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p-~~~ 247 (616)
.|.|.+++.+|.|.|+|.|.|..+... ..+.+.. ...+|.+....+....+ .+..+.|.|.+.+. | .+.
T Consensus 78 ~L~I~~~~~~D~g~Y~C~~~~~~~~~~-----~~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~ 151 (231)
T 2w59_A 78 AVPVSTQDWLSGERFTCTVQHEELPLP-----LSKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIE 151 (231)
T ss_dssp EEECCHHHHHTTCCEEEEEECTTCSSC-----EEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCE
T ss_pred EEEecchhccCCCEEEEEEEcCCCCCc-----eEEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcE
Confidence 466666666677777777776553211 1111111 11344443222111111 24579999999996 4 369
Q ss_pred eEEEECCeeecccCcEE---EE---------ec-CC---ceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 248 KEWLCNDITIISKDRFK---IV---------ND-DK---STKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 248 ~~W~~~~~~~~~~~~~~---~~---------~~-~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
+.|+++|..+..+.... .. .+ +. .+.|.|......|.|.|+|.|.|....
T Consensus 152 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 152 IRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp EEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred EEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 99999999876543111 11 11 11 135677777667799999999997544
No 378
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.32 E-value=6.4e-12 Score=129.30 Aligned_cols=96 Identities=36% Similarity=0.693 Sum_probs=86.5
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
.+|++|..+.+..++.++++|+|.+|..++|++|++|.|+++..++ .|..+... ..+.+++.+|.||+.|.|||+|.
T Consensus 8 ~~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~~--~~t~~~V~~L~~g~~Y~FRV~A~ 85 (573)
T 3uto_A 8 PEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKS--RYTYTTIEGLRAGKQYEFRIIAE 85 (573)
T ss_dssp CCCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEEE--SSSEEEECCCCTTCEEEEEEEEE
T ss_pred CCCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeccc--cCCEEEeCCCCCCCcEeEEEEEE
Confidence 4688899999999999999999999999999999999999999888 89987654 36789999999999999999999
Q ss_pred cCCCCCCCCCCCCCEEecc
Q psy12426 487 NKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 487 n~~G~g~~s~~~~~~~~~~ 505 (616)
|..|.|++|.++..++...
T Consensus 86 N~~G~s~PS~~s~~v~~~~ 104 (573)
T 3uto_A 86 NKHGQSKPCEPTAPVLIPG 104 (573)
T ss_dssp ETTEECCCCCCCCCEECC-
T ss_pred cCceEcCCcCCCCCEEcCC
Confidence 9999999999988877643
No 379
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=5.7e-12 Score=100.89 Aligned_cols=86 Identities=17% Similarity=0.204 Sum_probs=68.9
Q ss_pred CCccCCC--CCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeec
Q psy12426 1 APHIDRR--HLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKC 78 (616)
Q Consensus 1 ~P~i~~~--~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~ 78 (616)
||+|... .+..+.+.+|+.+.|.|.+.|+|.|.|+|+|+|..+. .+.+....
T Consensus 21 ~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~------------------------- 74 (118)
T 2e7c_A 21 PPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRT------------------------- 74 (118)
T ss_dssp EEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEE-------------------------
T ss_pred CCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEE-------------------------
Confidence 4666432 4678999999999999999999999999999999887 55554432
Q ss_pred cccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 79 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 79 ~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
......|.|.++...|.|.|.|.|.|..|.....
T Consensus 75 ---~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~ 108 (118)
T 2e7c_A 75 ---SDFDTVFFVRQAARSDSGEYELSVQIENMKDTAT 108 (118)
T ss_dssp ---CSSEEEEEESSCCTTTCEEEEEEEECSSCEECCE
T ss_pred ---CCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEE
Confidence 1123569999999999999999999999965443
No 380
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.32 E-value=3.8e-12 Score=110.41 Aligned_cols=106 Identities=8% Similarity=-0.003 Sum_probs=71.8
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEE-eeecCceeE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINV-IGEPIPTKE 249 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~-~~~p~~~~~ 249 (616)
...|.|.+++..|.|.|+|.+.+.. . ......+.+......|.+. ..+..+.|.|.+ .+ |.+.+.
T Consensus 68 ~~sL~I~~v~~~D~G~Y~C~v~~~~-~---~~~~~~L~V~~~~~~P~i~---------~~~~~v~L~C~~~~g-p~p~i~ 133 (180)
T 2dru_A 68 NGALRIYNVSKEDRGDYYMRMLHET-E---DQWKITMEVYEMVSKPMIY---------WECSNATLTCEVLEG-TDVELK 133 (180)
T ss_dssp TCCEEECSCCGGGCEEEEEEEESSS-E---EEEEEEEEEECCCCCCEEE---------EEGGGTEEEEECSSC-TTCEEE
T ss_pred CccEEEcCCCHHHCeEEEEEEEcCC-e---EEEEEEEEEECCCCCCEEE---------ecCCCEEEEEEeCCC-CCCEEE
Confidence 3479999999999999999997754 1 1111123333222334332 234669999999 55 999999
Q ss_pred EEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceee
Q psy12426 250 WLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 301 (616)
Q Consensus 250 W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~ 301 (616)
|++++..+.. . ....+.+.. ..|.|.|+|.|.|..+.....
T Consensus 134 W~~~~~~l~~-------~--~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~ 174 (180)
T 2dru_A 134 LYQGKEHLRS-------L--RQKTMSYQW--TNLRAPFKCKAVNRVSQESEM 174 (180)
T ss_dssp EEETTEEEEE-------E--SSSEEEEEC--SCCSSCEEEEEEETTEEEEEE
T ss_pred EEECCeECcC-------C--CCCEEEEEE--hhcCccEEEEEecCcCccccc
Confidence 9999987641 1 122555533 679999999999988765443
No 381
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.32 E-value=1.8e-12 Score=114.74 Aligned_cols=163 Identities=13% Similarity=-0.015 Sum_probs=106.5
Q ss_pred ceEEEcCCeEEEEEE---EeeecCceeEEEECCeeec-----------------ccCcEEEEecCCceEEEecCCCCCCc
Q psy12426 225 DIKVRAGSNFEFDIN---VIGEPIPTKEWLCNDITII-----------------SKDRFKIVNDDKSTKLKVFDSKRGDS 284 (616)
Q Consensus 225 ~~~v~~g~~~~l~c~---~~~~p~~~~~W~~~~~~~~-----------------~~~~~~~~~~~~~~~l~i~~l~~~~~ 284 (616)
.+.+..|+++.|.|. +.+.|.+.+.|+|++..+. ...++.+....+...|.|.+++..|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 467889999999995 5678999999999764211 11234455556677899999999999
Q ss_pred EEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC---------C
Q psy12426 285 GIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET---------G 355 (616)
Q Consensus 285 g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~---------~ 355 (616)
|.|+|.|.|..|.....+.|.|..+|.....+.......+..+.|.|...+. +.- .+.|...++ .
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~----P~P--~v~W~~~~~~~~~~~~~~~ 155 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAF----PHP--HVQWLMPEGVEPAPTAANG 155 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEE----SCC--EEEECCC------------
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCC----CCC--EEEEEECCeeecCcccccc
Confidence 9999999999998888888888765543222112223346678888875322 111 233321111 1
Q ss_pred CEEEccccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 356 RWVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 356 ~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
......+.....+.+.++...+.+.|+|.|.|..|...
T Consensus 156 r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 156 GVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAH 193 (203)
T ss_dssp CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEE
T ss_pred eEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEE
Confidence 11111112222345568888899999999999999754
No 382
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.32 E-value=6.5e-12 Score=117.49 Aligned_cols=129 Identities=12% Similarity=0.063 Sum_probs=79.5
Q ss_pred CCCeEEeecccCCCeEEEEEEEEeCCCCCCC-CCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEee-ec
Q psy12426 170 DTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP-SDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EP 244 (616)
Q Consensus 170 ~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~-s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p 244 (616)
....|.|.+++.+|.|.|.|.+.+..+.... ......+.+.. ...+|.+....+....+..|+.+.|.|.+.+ .|
T Consensus 99 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P 178 (270)
T 3qib_D 99 SPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 178 (270)
T ss_dssp SCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBS
T ss_pred cEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeC
Confidence 3448999999999999999999874321110 00111233322 2225554333333333445899999999998 56
Q ss_pred Cc-eeEEEECCeeecccCcEEE---E-----ecCC---ceEEEecCCCCCC-cEEEEEEEEcCCCCc
Q psy12426 245 IP-TKEWLCNDITIISKDRFKI---V-----NDDK---STKLKVFDSKRGD-SGIYTLAVKNSWGTD 298 (616)
Q Consensus 245 ~~-~~~W~~~~~~~~~~~~~~~---~-----~~~~---~~~l~i~~l~~~~-~g~y~c~a~n~~g~~ 298 (616)
.+ .+.|++++..+..+..... . .++. ...|.|......| .|.|+|.+.|.....
T Consensus 179 ~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 179 DHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp SCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBCT
T ss_pred CCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCCC
Confidence 56 8999999988754321110 0 0111 1356777776666 899999999865443
No 383
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.32 E-value=4.2e-12 Score=98.35 Aligned_cols=85 Identities=14% Similarity=0.264 Sum_probs=67.5
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|.. .|.++.+.+|+.+.|.|.+.|.|.|.|.|+|+|..+.....+.-...+
T Consensus 5 ~P~~~~-~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~------------------------- 58 (100)
T 2kdg_A 5 PPRFIQ-VPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSE------------------------- 58 (100)
T ss_dssp EEECCC-CCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEET-------------------------
T ss_pred CCeEEe-CCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcC-------------------------
Confidence 577764 488999999999999999999999999999999988753332222111
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 113 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 113 (616)
.....|.|.++...|.|.|.|.|.|..|...
T Consensus 59 --~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 89 (100)
T 2kdg_A 59 --KGLHSLIFEVVRASDAGAYACVAKNRAGEAT 89 (100)
T ss_dssp --TTEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred --CCeEEEEECCCCcccCEEEEEEEEcCCCeEE
Confidence 1124799999999999999999999988643
No 384
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.31 E-value=1.1e-11 Score=97.29 Aligned_cols=96 Identities=25% Similarity=0.403 Sum_probs=82.3
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.| ...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|
T Consensus 12 ~~P~~-~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 12 SPPCF-LRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEE-EECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCee-EcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 45666 34457789999999999999999999999999999998877888777777777999999999999999999999
Q ss_pred CCCCceeeEEEEEecCC
Q psy12426 294 SWGTDKGTAKVTVLDIP 310 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~p 310 (616)
..|.....+.|.|..+|
T Consensus 91 ~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCcEEEEEEEEEEcCC
Confidence 99988888888887654
No 385
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.31 E-value=3.7e-12 Score=97.40 Aligned_cols=79 Identities=11% Similarity=0.164 Sum_probs=66.1
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|. ..+.++.+.+|+.+.|.|.+.|.| |.|.|+|+|..+...++|.-.
T Consensus 9 pp~~~-~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~---------------------------- 58 (95)
T 2ckn_A 9 PWGVP-VEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT---------------------------- 58 (95)
T ss_dssp SCCBT-TBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC----------------------------
T ss_pred CCEEE-cCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe----------------------------
Confidence 46666 458899999999999999999998 899999999988755554221
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 113 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 113 (616)
...|.|.++...|.|.|.|.|.|..|...
T Consensus 59 ----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~ 87 (95)
T 2ckn_A 59 ----GEEVEVRDSIPADSGLYACVTSSPSGSDT 87 (95)
T ss_dssp ----SSEEEESSCCGGGSEEEEEEEEETTEEEE
T ss_pred ----CCEEEECCCChHHCEEEEEEeccCCCcEE
Confidence 46899999999999999999999888643
No 386
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=1.5e-11 Score=97.02 Aligned_cols=100 Identities=27% Similarity=0.434 Sum_probs=83.8
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecc-cCcEEEEec-CCceEEEecCCCCCCcEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS-KDRFKIVND-DKSTKLKVFDSKRGDSGIYTLAV 291 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~l~~~~~g~y~c~a 291 (616)
.+|.| ...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+... .....|.|.++...|.|.|+|.|
T Consensus 7 ~~P~~-~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 7 GAPFF-EMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp CCCCB-SSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCEE-EecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 45666 3445778899999999999999999999999999988765 456666554 34458999999999999999999
Q ss_pred EcCCCCceeeEEEEEecCCCCCC
Q psy12426 292 KNSWGTDKGTAKVTVLDIPSPPE 314 (616)
Q Consensus 292 ~n~~g~~~~~~~l~v~~~p~~p~ 314 (616)
.|..|.....+.|.|..+|.+|.
T Consensus 86 ~N~~g~~~~~~~l~V~~~~~~P~ 108 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAVNSGPS 108 (110)
T ss_dssp ECTTCCEEECCCEEEECCSCCSS
T ss_pred EECCCeEEEEEEEEEECCCCCCC
Confidence 99999998889999998887765
No 387
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=2.8e-12 Score=98.74 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=65.8
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|. .+++++.+.+|+.+.|.|.+ .|.|.|+|+|||..|..+++|....
T Consensus 7 p~~~~-~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~--------------------------- 56 (100)
T 2yuz_A 7 GLKIL-TPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQ--------------------------- 56 (100)
T ss_dssp CCCCS-BCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEE---------------------------
T ss_pred CCEEe-ccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEE---------------------------
Confidence 45665 56999999999999999999 8999999999999998778877653
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNK 108 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~ 108 (616)
......|.|.++.+.|.|.|.|.|.|.
T Consensus 57 -~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 57 -KGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp -CSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred -eCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 112357999999999999999999987
No 388
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.31 E-value=3.9e-12 Score=96.91 Aligned_cols=82 Identities=23% Similarity=0.320 Sum_probs=66.3
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCC--eeeeeccceEEEeecCCCCCceeEeeeccCCccceeec
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGG--NPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKC 78 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~ 78 (616)
||+|. .+++++.+.+|+.+.|.|.+.|.|.|.|+|+|++ ..+... +.-..
T Consensus 2 ~P~i~-~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~------------------------- 53 (93)
T 1wit_A 2 KPKIL-TASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE--LLVDA------------------------- 53 (93)
T ss_dssp CCEEC-CCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT--SEEEE-------------------------
T ss_pred CCeEE-cCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc--EEEEe-------------------------
Confidence 68886 4588999999999999999999999999999999 766522 11110
Q ss_pred cccCCCCCceEecCcccCCeEEEEEEEEcCCCCCC
Q psy12426 79 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 113 (616)
Q Consensus 79 ~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 113 (616)
......|.|.++...|.|.|.|.|.|..|...
T Consensus 54 ---~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~ 85 (93)
T 1wit_A 54 ---KSSTTSIFFPSAKRADSGNYKLKVKNELGEDE 85 (93)
T ss_dssp ---ETTEEEEECTTBCGGGCEEEEEEEEETTEEEE
T ss_pred ---cCCEEEEEECCCChhcCEEEEEEEEcCCCeEE
Confidence 11235799999999999999999999998554
No 389
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.30 E-value=2.4e-11 Score=93.82 Aligned_cols=94 Identities=27% Similarity=0.375 Sum_probs=78.2
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEE-ecCCceEEEecCCCCCCcEEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIV-NDDKSTKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
.+|.|. ..+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+. ..+....|.|.++...|.|.|+|.|.
T Consensus 4 ~~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 4 EAPKIF-ERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp EEEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCceE-ecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEE
Confidence 345553 3456788999999999999999999999999999998776665543 34556789999999999999999999
Q ss_pred cCCCCceeeEEEEEec
Q psy12426 293 NSWGTDKGTAKVTVLD 308 (616)
Q Consensus 293 n~~g~~~~~~~l~v~~ 308 (616)
|..|.....+.|.|..
T Consensus 83 N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 83 NIAGETSSHAFLLVQA 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCcEEEEEEEEEec
Confidence 9999888888887754
No 390
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.30 E-value=6.2e-11 Score=103.40 Aligned_cols=163 Identities=17% Similarity=0.142 Sum_probs=112.4
Q ss_pred cCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCC--ceEEEecCCCCCCcEEEEEEEEcCCCC-
Q psy12426 221 DQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDK--STKLKVFDSKRGDSGIYTLAVKNSWGT- 297 (616)
Q Consensus 221 ~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~l~i~~l~~~~~g~y~c~a~n~~g~- 297 (616)
..+.++.+..|+.+.|.|.+.+.|.+.+.|++++..+....+..+...+. ...|.|.++...|.|.|+|.+.|..|.
T Consensus 7 ~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 86 (182)
T 1rhf_A 7 GAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETE 86 (182)
T ss_dssp CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCE
T ss_pred eCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcE
Confidence 34567889999999999999999999999999999887665555443332 368999999999999999999998775
Q ss_pred ceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCC
Q psy12426 298 DKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGH 377 (616)
Q Consensus 298 ~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~ 377 (616)
......+.+..+|.....+.......+..+.|.|...... .+ ..+. |...+... .........+.|.++. +
T Consensus 87 ~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p-~~v~--W~~~~~~~--~~~~~~~~~L~i~~~~--d 157 (182)
T 1rhf_A 87 ISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPP--EP-VTIV--WWRGTTKI--GGPAPSPSVLNVTGVT--Q 157 (182)
T ss_dssp ECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSS--SC-CEEE--EEETTEEC--SCSEESSEEEEECCCS--S
T ss_pred EEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCC--CC-CEEE--EEcCCeEC--CCCCCCceEEEEeccc--c
Confidence 3567788887766533322234455677899999864321 11 1222 22211100 0001145678888874 5
Q ss_pred eEEEEEEEEecCcCC
Q psy12426 378 DYNFRVKAVNKIGES 392 (616)
Q Consensus 378 ~y~~~v~a~n~~g~~ 392 (616)
.+.|+|.|.|..|..
T Consensus 158 ~G~Y~C~a~N~~g~~ 172 (182)
T 1rhf_A 158 STMFSCEAHNLKGLA 172 (182)
T ss_dssp CEEEEEEEEETTEEE
T ss_pred CeEEEEEEECCCCCc
Confidence 689999999998864
No 391
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=99.30 E-value=5.1e-12 Score=100.74 Aligned_cols=86 Identities=20% Similarity=0.249 Sum_probs=71.1
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
.+|++|.++.+..++.+++.|+|.+|.. .+.+|+|.|+..++ .+.....+++....++|.+|.|++.|.|+|+|+
T Consensus 27 tp~~~P~~l~v~~~t~~Si~lsW~~p~~----~i~~Y~V~y~~~~~~~~~~~~~v~~~~t~~~l~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 27 SVSDVPTKLEVVAATPTSLLISWDAPAV----TVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAV 102 (121)
T ss_dssp --CCSCEEEEEEEECSSCEEEEEECCSS----CCCEEEEEEEETTTCSCBEEEEEETTCCEEEECCCCTTCEEEEEEEEE
T ss_pred CCCCCCCccEEEecCCCEEEEEEcCCCC----CCcEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 4678899999999999999999998743 48999999988765 333444556778999999999999999999999
Q ss_pred cCCCCCCCCCC
Q psy12426 487 NKGGPGEPSKA 497 (616)
Q Consensus 487 n~~G~g~~s~~ 497 (616)
|..|.|++|..
T Consensus 103 ~~~G~g~~Ss~ 113 (121)
T 2ocf_D 103 TGLRLMLAGSK 113 (121)
T ss_dssp CCHHHHHHSCC
T ss_pred eCCCccCCCCC
Confidence 99999887653
No 392
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.30 E-value=6.4e-12 Score=99.79 Aligned_cols=82 Identities=22% Similarity=0.357 Sum_probs=67.7
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEc
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVN 487 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n 487 (616)
..|++|.++++..++.+++.|+|.+|.. .+.+|.|+|+..++.... ..+.++...++|.+|.|++.|.|+|+|+|
T Consensus 6 t~p~~P~~l~~~~~t~~sv~lsW~~p~~----~i~~Y~v~y~~~~~~~~~-~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~ 80 (115)
T 2cuh_A 6 SGPDGPTQLRALNLTEGFAVLHWKPPQN----PVDTYDIQVTAPGAPPLQ-AETPGSAVDYPLHDLVLHTNYTATVRGLR 80 (115)
T ss_dssp CCCSSCEEEECCCCSSSCEEEEEECCSS----CCSEEEEEEECSSSCCEE-EEEETTCSEEEECSCCSSSEEEEEEEEEE
T ss_pred cCCCCCcceEEEeccCCeEEEEEECCCC----CccEEEEEEEcCCCCcEE-EEECCCccEEEEeCCCCCCEEEEEEEEEe
Confidence 5688899999999999999999997642 588999999876543332 34567788999999999999999999999
Q ss_pred CCCCCCC
Q psy12426 488 KGGPGEP 494 (616)
Q Consensus 488 ~~G~g~~ 494 (616)
..|.+.+
T Consensus 81 ~~~~s~~ 87 (115)
T 2cuh_A 81 GPNLTSP 87 (115)
T ss_dssp TTEECCC
T ss_pred CCCcCCC
Confidence 8887654
No 393
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.30 E-value=2.7e-11 Score=93.53 Aligned_cols=92 Identities=32% Similarity=0.507 Sum_probs=80.4
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
+|.+ ...+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|.
T Consensus 6 ~P~i-~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 6 KPVI-VTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEE-EECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEE-EecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 4555 344567889999999999999999999999999999988888888887777779999999999999999999999
Q ss_pred CCCceeeEEEEEe
Q psy12426 295 WGTDKGTAKVTVL 307 (616)
Q Consensus 295 ~g~~~~~~~l~v~ 307 (616)
.|.....+.+.|.
T Consensus 85 ~g~~~~~~~l~V~ 97 (99)
T 3puc_A 85 AGSVSSSCKLTIK 97 (99)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEeEEEEEEEE
Confidence 9988888877765
No 394
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.30 E-value=5.4e-11 Score=105.77 Aligned_cols=165 Identities=12% Similarity=0.111 Sum_probs=108.3
Q ss_pred cceEEEcCCeEEEEEEEee-ecCceeEEEECCeeecccCcEEEEecC--CceEEEecCCCCCCcEEEEEEEEcCCCCcee
Q psy12426 224 SDIKVRAGSNFEFDINVIG-EPIPTKEWLCNDITIISKDRFKIVNDD--KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKG 300 (616)
Q Consensus 224 ~~~~v~~g~~~~l~c~~~~-~p~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~ 300 (616)
.+..+.+|+.+.|.|.+.+ .|.+.+.|++++..+..+.++.+.... +...|.|.++...|+|.|+|.|.| |....
T Consensus 10 ~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~ 87 (207)
T 3rbs_A 10 LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATN 87 (207)
T ss_dssp EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEE
T ss_pred CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEE
Confidence 3578899999999999964 799999999999999887777776554 456899999999999999999999 54443
Q ss_pred eEEEEEe---------------------cCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEE
Q psy12426 301 TAKVTVL---------------------DIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVP 359 (616)
Q Consensus 301 ~~~l~v~---------------------~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~ 359 (616)
...+.+. .+|..... +......+..+.|.|..........+.+|.- ......... .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~-g~~l~~~~~-~ 164 (207)
T 3rbs_A 88 HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-LSWEVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEK-H 164 (207)
T ss_dssp EEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEE-EEEEEETTTEEEEEEEEESCCTTCEEEEEET-TEEECCCCC-C
T ss_pred EEEEEEEccchhhhcccccccccccccCCCCceEec-CCcEEcCCCcEEEEEEEeCCCCCCEEEEEEC-CEECCCCCc-e
Confidence 3333211 01211111 2234456778999998543211112222210 000000000 0
Q ss_pred ccccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 360 MGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 360 ~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
........+.|.++...+.+.|+|.|.|..|...
T Consensus 165 ~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 198 (207)
T 3rbs_A 165 DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDK 198 (207)
T ss_dssp CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEE
T ss_pred EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEE
Confidence 1112334689999999999999999999999753
No 395
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.30 E-value=5.6e-12 Score=97.45 Aligned_cols=84 Identities=18% Similarity=0.237 Sum_probs=69.4
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|. ..+.++.+.+|+.+.|.|.+.|.|.|.|.|+|+|..+...+.|.....
T Consensus 6 ~P~i~-~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~-------------------------- 58 (99)
T 3puc_A 6 KPVIV-TGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSED-------------------------- 58 (99)
T ss_dssp EEEEE-ECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEE--------------------------
T ss_pred CCEEE-ecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEe--------------------------
Confidence 46666 348899999999999999999999999999999998876666654421
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 113 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 113 (616)
.....|.|.++...|.|.|.|.|.|..|...
T Consensus 59 --~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 89 (99)
T 3puc_A 59 --KGGFFLEIHKTDTSDSGLYTCTVKNSAGSVS 89 (99)
T ss_dssp --TTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred --CCEEEEEECCCCcccCEEEEEEEEeCCCcEe
Confidence 1234799999999999999999999888653
No 396
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=99.29 E-value=1.7e-11 Score=94.54 Aligned_cols=81 Identities=19% Similarity=0.276 Sum_probs=67.8
Q ss_pred CCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEc
Q psy12426 409 RPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVN 487 (616)
Q Consensus 409 ~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n 487 (616)
.|++|.++++..++.+++.|+|.+|. . ++.+.+|.|+|+..++ .+.....++.....++|.+|.|++.|.|+|+|.|
T Consensus 4 ~~~~P~~l~v~~~t~~Sv~l~W~~p~-~-~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 4 VSSVPTKLEVVAATPTSLLISWDAPM-S-SSSVYYYRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp EEBSSCEEEEEEEETTEEEEEECCCC-T-TSCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCcceEEeecCCCEEEEEecCCC-C-CCceeeEEEEEEECCCCCccEEEEcCCCccEEEECCCCCCCEEEEEEEEEe
Confidence 46789999999999999999999875 3 3469999999998765 2323334566788999999999999999999999
Q ss_pred CCCC
Q psy12426 488 KGGP 491 (616)
Q Consensus 488 ~~G~ 491 (616)
..|.
T Consensus 82 ~~~~ 85 (101)
T 3k2m_C 82 EDSA 85 (101)
T ss_dssp ECTT
T ss_pred CCcc
Confidence 9988
No 397
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=99.29 E-value=9.3e-12 Score=96.60 Aligned_cols=83 Identities=24% Similarity=0.355 Sum_probs=69.3
Q ss_pred CCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC--CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 409 RPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG--PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 409 ~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~--~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
.|++|.++.+..++.+++.|+|.+|. +.+.+|.|+|+..+. .+.. ..+.+...+++|.+|.|++.|.|+|+|.
T Consensus 2 ~p~~P~~l~v~~~t~~sv~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~-~~v~~~~~~~~l~~L~p~t~Y~~~V~A~ 76 (104)
T 2rb8_A 2 RLDAPSQIEVKDVTDTTALITWMPPS----QPVDGFELTYGIKDVPGDRTT-IDLTEDENQYSIGNLKPDTEYEVSLISR 76 (104)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCS----SCCSEEEEEEEETTCTTCCEE-EEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCccEEEEecCCeEEEEEcCCC----CccceEEEEEEECcCCCceEE-EEcCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 47889999999999999999999764 358999999977542 4443 3456778899999999999999999999
Q ss_pred cCCCCCCCCC
Q psy12426 487 NKGGPGEPSK 496 (616)
Q Consensus 487 n~~G~g~~s~ 496 (616)
|..|.|.++.
T Consensus 77 ~~~g~s~p~~ 86 (104)
T 2rb8_A 77 RGDMSSNPAK 86 (104)
T ss_dssp ETTEECCCEE
T ss_pred eCCccCCCEE
Confidence 9999987543
No 398
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.29 E-value=1.3e-11 Score=114.11 Aligned_cols=122 Identities=11% Similarity=-0.001 Sum_probs=74.2
Q ss_pred EEeecccCCCeEEEEEEEEeCCCC---CCCCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEee-ecCc
Q psy12426 174 GKVLDLIEGNQYEFRVLAVNKGGP---GEPSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIG-EPIP 246 (616)
Q Consensus 174 l~i~~l~~~~~~~y~c~a~n~~g~---~~~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~-~p~~ 246 (616)
|.|.+++.+|+|.|.|.+.+..+. .........+.+.. ...+|.+....+....+..|..+.|.|.+.+ .|.+
T Consensus 76 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~ 155 (253)
T 3to4_D 76 LRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 155 (253)
T ss_dssp CEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCc
Confidence 899999999999999999876431 00000111222222 2245554332222222335689999999998 5656
Q ss_pred -eeEEEECCeeecccCcEEE---E-----ecCC---ceEEEecCCCCCC-cEEEEEEEEcCC
Q psy12426 247 -TKEWLCNDITIISKDRFKI---V-----NDDK---STKLKVFDSKRGD-SGIYTLAVKNSW 295 (616)
Q Consensus 247 -~~~W~~~~~~~~~~~~~~~---~-----~~~~---~~~l~i~~l~~~~-~g~y~c~a~n~~ 295 (616)
.+.|++++..+........ . .++. .+.|.|......| .+.|+|.+.+..
T Consensus 156 i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 156 VELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred EEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 8999999988754321110 0 0111 1356677666565 679999999853
No 399
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.29 E-value=1.8e-11 Score=90.33 Aligned_cols=81 Identities=20% Similarity=0.387 Sum_probs=70.7
Q ss_pred CcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeE
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 302 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~ 302 (616)
..++.+.+|+.+.|.|.+.+ |.+.+.|+|++..+..+.++.+...+....|.|.++...|+|.|+|.| |....++
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----~n~~~~a 77 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDA----PQDSRIF 77 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEEC----TTTCEEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEE----CCEEEEE
Confidence 35788999999999999866 888999999999999889999988888889999999999999999998 4455677
Q ss_pred EEEEec
Q psy12426 303 KVTVLD 308 (616)
Q Consensus 303 ~l~v~~ 308 (616)
.|.|..
T Consensus 78 ~l~V~e 83 (84)
T 2lu7_A 78 LVSVEE 83 (84)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 777764
No 400
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=4.7e-12 Score=98.64 Aligned_cols=92 Identities=22% Similarity=0.283 Sum_probs=74.0
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCC-CCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPK-KDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIA 485 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~-~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a 485 (616)
.+|.+|.++.+...+.+++.|+|.+|. ...++.+.+|.|+|+..+. .|.. .......+.|.+|.|++.|.|+|+|
T Consensus 7 ~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A 83 (103)
T 2edy_A 7 GPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQ---NITTDTRFTLTGLKPDTTYDIKVRA 83 (103)
T ss_dssp CCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEE---EEESSSCCEECSCCTTCCEEEECCE
T ss_pred CCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEE---EcCCcceEEEcCCCCCCEEEEEEEE
Confidence 456788888888889999999999884 2334479999999998775 3333 2345778999999999999999999
Q ss_pred EcCCCCCCCCCCCCCEE
Q psy12426 486 VNKGGPGEPSKASAPVT 502 (616)
Q Consensus 486 ~n~~G~g~~s~~~~~~~ 502 (616)
.|..|.|++|....+.|
T Consensus 84 ~n~~G~g~~S~~~~~~T 100 (103)
T 2edy_A 84 WTSKGSGPLSPSIQSRT 100 (103)
T ss_dssp ECSSCBCCCCCCCCCCC
T ss_pred ECCCCCCCCCCCEEEEe
Confidence 99999999998766543
No 401
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=99.29 E-value=1.5e-11 Score=94.48 Aligned_cols=82 Identities=29% Similarity=0.482 Sum_probs=68.6
Q ss_pred CCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcC
Q psy12426 410 PDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNK 488 (616)
Q Consensus 410 p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~ 488 (616)
+++|.++.+..++.+++.|+|.+|. +.+.+|.|+|+..++ .+............++|.+|.|++.|.|+|+|.|.
T Consensus 2 ~~~P~~l~v~~~~~~sv~l~W~~p~----~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 77 (98)
T 3teu_A 2 LDAPTDLQVTNVTDTSITVSWTPPS----ATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKD 77 (98)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCS----SCCSEEEEEEEETTSCSCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred CCCCCceEEEEecCCEEEEEEeCCC----CcccEEEEEEEECCCCCceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeC
Confidence 5688899999999999999999872 468999999986554 33334455677899999999999999999999999
Q ss_pred CCCCCCC
Q psy12426 489 GGPGEPS 495 (616)
Q Consensus 489 ~G~g~~s 495 (616)
.|.|+++
T Consensus 78 ~G~s~p~ 84 (98)
T 3teu_A 78 NQESPPL 84 (98)
T ss_dssp TEECCCE
T ss_pred CCCCCCe
Confidence 9988754
No 402
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.29 E-value=3.5e-11 Score=95.73 Aligned_cols=100 Identities=22% Similarity=0.352 Sum_probs=84.0
Q ss_pred cCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecc-cCcEEEEecC-CceEEEecCCCCCCcEEEEEE
Q psy12426 213 KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS-KDRFKIVNDD-KSTKLKVFDSKRGDSGIYTLA 290 (616)
Q Consensus 213 ~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~-~~~~~~~~~~-~~~~l~i~~l~~~~~g~y~c~ 290 (616)
..+|.| ...+.++.+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+...+ ....|.|.++...|.|.|+|.
T Consensus 13 ~~~p~f-~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (116)
T 2kkq_A 13 KRAPMF-IYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVS 91 (116)
T ss_dssp CBCCCB-SSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEE
T ss_pred CCCCeE-EeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEE
Confidence 345666 4556788999999999999999999999999999998764 4667666544 345899999999999999999
Q ss_pred EEcCCCCceeeEEEEEecCCCCC
Q psy12426 291 VKNSWGTDKGTAKVTVLDIPSPP 313 (616)
Q Consensus 291 a~n~~g~~~~~~~l~v~~~p~~p 313 (616)
|.|..|.....+.|.|..+|.++
T Consensus 92 a~N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 92 AVNEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp EEETTEEEEEEEEEEEECCSCCC
T ss_pred EEcCCCeEEEEEEEEEeCCCCCC
Confidence 99999998889999998877654
No 403
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.28 E-value=1.7e-11 Score=95.24 Aligned_cols=83 Identities=18% Similarity=0.250 Sum_probs=70.8
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEc
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVN 487 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n 487 (616)
.+|++|.++++..++.+++.|+|.+|.. .+.+|.|+|+..++.|... .+.....+++|.+|.|++.|.|+|+|.|
T Consensus 6 t~p~~P~~l~v~~~~~~sv~lsW~~p~~----~i~~Y~i~y~~~~~~~~~~-~~~~~~ts~~l~~L~p~t~Y~~~V~A~~ 80 (105)
T 2cum_A 6 SGLEAPRDLEAKEVTPRTALLTWTEPPV----RPAGYLLSFHTPGGQTQEI-LLPGGITSHQLLGLFPSTSYNARLQAMW 80 (105)
T ss_dssp TTCCCCEEEEEESCCSSCEEEEEECCSS----CCSEEEEEEECTTSCEEEE-EECSSCSEEEECSCCTTCEEEEEEEEEB
T ss_pred cCCCCCCceEEEeccCCEEEEEEcCCCC----ccceEEEEEEeCCCceEEE-EECCCccEEEECCCCCCCEEEEEEEEEe
Confidence 5788999999999999999999998642 5899999998766555543 4567789999999999999999999999
Q ss_pred CCCCCCCC
Q psy12426 488 KGGPGEPS 495 (616)
Q Consensus 488 ~~G~g~~s 495 (616)
..|.|.+.
T Consensus 81 ~~g~s~~~ 88 (105)
T 2cum_A 81 GQSLLPPV 88 (105)
T ss_dssp TTBCCCCE
T ss_pred CCcccCCE
Confidence 99988753
No 404
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=6.1e-12 Score=97.39 Aligned_cols=83 Identities=17% Similarity=0.239 Sum_probs=67.6
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee-ccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL-RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~-~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
||.|. ..|.++.+.+|+.+.|.|.+.|.|.|.|.|+|++..+.. ...|..
T Consensus 8 ~P~i~-~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~---------------------------- 58 (100)
T 2edj_A 8 PPIIL-QGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATI---------------------------- 58 (100)
T ss_dssp SCEEE-ECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEE----------------------------
T ss_pred CCEEE-eCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEE----------------------------
Confidence 56666 458899999999999999999999999999999988763 223211
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
.....|.|.++...|.|.|.|.|.|..|.....
T Consensus 59 ---~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 91 (100)
T 2edj_A 59 ---QEQGTLQIKNLRISDTGTYTCVATSSSGETSWS 91 (100)
T ss_dssp ---CTTCCEEEESCCTTTCCEEEEEEECSSCCCBCC
T ss_pred ---cCCCEEEEccCCcccCEEEEEEEEcCCCCEEEE
Confidence 124579999999999999999999999876444
No 405
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.28 E-value=1e-11 Score=96.24 Aligned_cols=83 Identities=22% Similarity=0.394 Sum_probs=68.5
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee--ccceEEEeecCCCCCceeEeeeccCCccceeec
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL--RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKC 78 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~--~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~ 78 (616)
||.|. ..+.++.+.+|+.+.|.|.+.|.|.|.|.|+|++..+.. .++|....
T Consensus 5 pP~i~-~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~------------------------- 58 (100)
T 3irg_A 5 PPKIE-ALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN------------------------- 58 (100)
T ss_dssp EEEEC-CCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEE-------------------------
T ss_pred CCeee-cCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEe-------------------------
Confidence 56776 448899999999999999999999999999999998862 55554442
Q ss_pred cccCCCCCceEecCcccCCeEEEEEEEEcCCCCC
Q psy12426 79 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPG 112 (616)
Q Consensus 79 ~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~ 112 (616)
......|.|.++...|.|.|.|.|.|..|..
T Consensus 59 ---~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 89 (100)
T 3irg_A 59 ---TDDLTTLIIMDVQKQDGGLYTLSLGNEFGSD 89 (100)
T ss_dssp ---CSSEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred ---cCCEEEEEEeecCcccCEEEEEEEEeCCCcE
Confidence 1123679999999999999999999988864
No 406
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.28 E-value=4.4e-11 Score=90.46 Aligned_cols=89 Identities=19% Similarity=0.322 Sum_probs=73.8
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.| ...+.++.+.+|+.+.|.|.+.+ +.+.+.|++++..+..+.++.+...+....|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~~~~-~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 4 ALIEV-EKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCE-EECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCcEe-eccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 34555 45567889999999999999986 45789999999999888888888878788999999999999999999977
Q ss_pred CCCCceeeEEEEEec
Q psy12426 294 SWGTDKGTAKVTVLD 308 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~ 308 (616)
. ..++.|.|.+
T Consensus 82 ~----~~sa~L~V~~ 92 (93)
T 1waa_A 82 T----KSAANLKVKE 92 (93)
T ss_dssp E----EEEEEEEEEC
T ss_pred C----cEEEEEEEEc
Confidence 3 3566666654
No 407
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.28 E-value=2.5e-11 Score=95.59 Aligned_cols=102 Identities=24% Similarity=0.292 Sum_probs=82.3
Q ss_pred cCCCCCCCCccc-eeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEE
Q psy12426 308 DIPSPPEGPLKP-SNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAV 386 (616)
Q Consensus 308 ~~p~~p~~~~~~-~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 386 (616)
..|.+|.+ +.+ .....+++.|+|..|..+++..+..|.|+++......|..........+.+.+|.+++.|.|+|+|.
T Consensus 7 ~~P~~P~~-~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2crz_A 7 GPPGPCLP-PRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAA 85 (110)
T ss_dssp CCCCCCCC-CEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEE
T ss_pred CCCCCCCC-ceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEeCCcEEEEECCcCCCCEEEEEEEEE
Confidence 46677776 444 4567789999998887777789999999999877778887766667889999999999999999999
Q ss_pred ecCcCCCCccccCCEEccCCCCCCCCC
Q psy12426 387 NKIGESLPLVCQSPITAKDPFGRPDRP 413 (616)
Q Consensus 387 n~~g~~~~~~~s~~~~~~~~~~~p~~p 413 (616)
|..|.+.++ ..+.+.+...+|.+|
T Consensus 86 n~~G~g~~S---~~~~~~T~~~~P~~P 109 (110)
T 2crz_A 86 NKMGFGPFS---EKCDITTAPGSGPSS 109 (110)
T ss_dssp CSSCBCCCC---CCEEEECCCSCCCCC
T ss_pred cCCccCCCC---CccccccCCCCCCCC
Confidence 999998874 455566666667665
No 408
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.28 E-value=1.3e-11 Score=97.64 Aligned_cols=89 Identities=16% Similarity=0.130 Sum_probs=64.7
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||+|.+..+ ..+..+.|.|.+.|+|.|.|+|+|||+.|..+..+.....+.. ..
T Consensus 4 pP~I~l~~~-----~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~---------------------~~ 57 (126)
T 1he7_A 4 PASVQLHTA-----VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPA---------------------AN 57 (126)
T ss_dssp CCCCCCCCC-----CCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCC---------------------SS
T ss_pred CCEEEccCC-----ccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeecc---------------------cc
Confidence 788864432 3678999999999999999999999999986554332211100 00
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
.......|.|.++.+.|.|.|.|.|.|..|.....
T Consensus 58 ~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 58 ETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 00113579999999999999999999999976544
No 409
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=8.7e-12 Score=98.44 Aligned_cols=87 Identities=17% Similarity=0.297 Sum_probs=69.7
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee-ccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL-RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~-~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
||.|.. .+.++.+.+|+.+.|.|.+.|.|.|.|+|+|++..+.. .+.|.-....
T Consensus 8 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~------------------------ 62 (110)
T 2dm2_A 8 APFFEM-KLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDL------------------------ 62 (110)
T ss_dssp CCCBSS-CCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECT------------------------
T ss_pred CCEEEe-cCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECC------------------------
Confidence 577774 48899999999999999999999999999999998874 4444433210
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
.....|.|.++...|.|.|.|.|.|..|.....
T Consensus 63 ---~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 95 (110)
T 2dm2_A 63 ---DGTCSLHTTASTLDDDGNYTIMAANPQGRISCT 95 (110)
T ss_dssp ---TCEEEEEESSCCTTTCSCCEEEEECTTCCEEEC
T ss_pred ---CcEEEEEECCCChhhCEEEEEEEEECCCeEEEE
Confidence 012379999999999999999999999976444
No 410
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.27 E-value=7.5e-12 Score=96.69 Aligned_cols=85 Identities=24% Similarity=0.361 Sum_probs=66.8
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeecc-ceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRP-IWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G-~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
||.|.. .|.++.+.+|+.+.|.|.+.|.|.|.|.|+|++..+.... .|.-..
T Consensus 5 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~-------------------------- 57 (99)
T 1u2h_A 5 PPTFKV-SLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEA-------------------------- 57 (99)
T ss_dssp EEEEEE-CCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEEC--------------------------
T ss_pred CCEEEE-cCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEEC--------------------------
Confidence 566664 4888999999999999999999999999999999886432 222111
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCC
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 114 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~ 114 (616)
......|.|.++...|.|.|.|.|.|..|....
T Consensus 58 --~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~ 90 (99)
T 1u2h_A 58 --EGGLCRLRILAAERGDAGFYTCKAVNEYGARQC 90 (99)
T ss_dssp --GGGEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred --CCCEEEEEEccCCcCCCEEEEEEEEECCCceeE
Confidence 011236999999999999999999999886543
No 411
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.27 E-value=2.4e-11 Score=92.57 Aligned_cols=82 Identities=22% Similarity=0.374 Sum_probs=66.8
Q ss_pred CCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCC-ceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCC
Q psy12426 411 DRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGP-WEKACIVPANITATSVPDLKEGEEYEFRVIAVNKG 489 (616)
Q Consensus 411 ~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~-~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~ 489 (616)
++|.++++..++.+++.|+|.+|. +.+.+|.|+|+..++. +.......+...+++|.+|.|++.|.|+|+|+|..
T Consensus 3 ~~P~~l~~~~~~~~si~lsW~~p~----~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~ 78 (94)
T 1j8k_A 3 DRPKGLAFTDVDVDSIKIAWESPQ----GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDD 78 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCS----SCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSS
T ss_pred CCCCccEEEeecCCEEEEEEcCCC----CCcceEEEEEEeCCCCCceEEecCCCCccEEEeCCCCCCCEEEEEEEEEcCC
Confidence 578899999999999999999874 3689999999887642 22222334567899999999999999999999999
Q ss_pred CCCCCCC
Q psy12426 490 GPGEPSK 496 (616)
Q Consensus 490 G~g~~s~ 496 (616)
|.|.++.
T Consensus 79 g~s~p~~ 85 (94)
T 1j8k_A 79 MESQPLI 85 (94)
T ss_dssp CCCCCEE
T ss_pred CcCCCEE
Confidence 9887653
No 412
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.27 E-value=4.4e-11 Score=109.74 Aligned_cols=167 Identities=22% Similarity=0.239 Sum_probs=111.9
Q ss_pred CcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcE-EEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceee
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRF-KIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGT 301 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~ 301 (616)
+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+....+. ..........|.|.++...|.|.|+|.+.|..|.....
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 101 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT 101 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEE
Confidence 35688999999999999999999999999999987654322 11222334589999999999999999999988888777
Q ss_pred EEEEEecCCCC-CCC----CccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEe--CC------CCCEEE-------cc
Q psy12426 302 AKVTVLDIPSP-PEG----PLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMD--ME------TGRWVP-------MG 361 (616)
Q Consensus 302 ~~l~v~~~p~~-p~~----~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~--~~------~~~~~~-------~~ 361 (616)
..+.+...+.. |.. +-......+..+.|.|...... ...+.+.+.. .+ ...... ..
T Consensus 102 ~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p----~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (241)
T 3grw_A 102 YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDA----QPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISES 177 (241)
T ss_dssp EEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSS----CCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSB
T ss_pred EEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCC----CCEEEEEEcccCCCcccCCCCceeeeeeeEeeeee
Confidence 88887664322 110 0112334567889999863322 1223332210 11 000000 00
Q ss_pred ccccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 362 DVSGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 362 ~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
......+.|.++...+.+.|+|.|.|..|...
T Consensus 178 ~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~ 209 (241)
T 3grw_A 178 VEADVRLRLANVSERDGGEYLCRATNFIGVAE 209 (241)
T ss_dssp SEEEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred cCCceEEEECcCCcccCcEEEEEEecCcceEE
Confidence 11245688999999999999999999888753
No 413
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.27 E-value=1.2e-11 Score=93.76 Aligned_cols=74 Identities=22% Similarity=0.255 Sum_probs=62.9
Q ss_pred CccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecccc
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQT 81 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~ 81 (616)
|.|. ..|.+..+.+|+.+.|.|.+.|+|.|.|.|+|++..+.
T Consensus 4 ~~i~-~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~------------------------------------- 45 (91)
T 3bfo_A 4 LQIC-VEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLT------------------------------------- 45 (91)
T ss_dssp CEEE-ECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECT-------------------------------------
T ss_pred eEEE-ECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCC-------------------------------------
Confidence 4454 34888999999999999999999999999999998776
Q ss_pred CCCCCceEecCcccCCeEEEEEEEEcCCCCCC
Q psy12426 82 EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 113 (616)
Q Consensus 82 ~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 113 (616)
......|.|.++...|.|.|.|.|.|..|...
T Consensus 46 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 77 (91)
T 3bfo_A 46 HETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD 77 (91)
T ss_dssp TCCSSEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred cCCCCeEEECCCCHHhCEEEEEEEEcCCCCEE
Confidence 12245799999999999999999999988543
No 414
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.26 E-value=7.2e-11 Score=90.64 Aligned_cols=89 Identities=19% Similarity=0.303 Sum_probs=78.4
Q ss_pred cCCcceEEEcCCeEEEEEEEeee-cCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCce
Q psy12426 221 DQLSDIKVRAGSNFEFDINVIGE-PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDK 299 (616)
Q Consensus 221 ~~~~~~~v~~g~~~~l~c~~~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~ 299 (616)
..+.++.+.+|+.+.|.|.+.+. |.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|..|...
T Consensus 6 ~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 85 (97)
T 2bk8_A 6 GQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDS 85 (97)
T ss_dssp CCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred ccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEe
Confidence 34567889999999999999997 99999999999998888888876667777999999999999999999999999988
Q ss_pred eeEEEEEecC
Q psy12426 300 GTAKVTVLDI 309 (616)
Q Consensus 300 ~~~~l~v~~~ 309 (616)
..+.|.|...
T Consensus 86 ~~~~l~V~~~ 95 (97)
T 2bk8_A 86 SYAELFVKGV 95 (97)
T ss_dssp EEEEEEETTT
T ss_pred EEEEEEEEec
Confidence 8888887653
No 415
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.26 E-value=2.9e-12 Score=100.11 Aligned_cols=85 Identities=20% Similarity=0.325 Sum_probs=69.7
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
+|.|. ..|+++.+.+|+.+.|.|.+.|.|.|.|.|+|+|..+...+.|.-..
T Consensus 14 ~~~i~-~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~--------------------------- 65 (106)
T 1nct_A 14 AARIL-TKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTT--------------------------- 65 (106)
T ss_dssp CCEEE-ECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEE---------------------------
T ss_pred CCEEE-ECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEE---------------------------
Confidence 35665 45889999999999999999999999999999998887555654432
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 114 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~ 114 (616)
......|.|.++...|.|.|.|.|.|..|....
T Consensus 66 -~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 98 (106)
T 1nct_A 66 -TKYKSTFEISSVQASDEGNYSVVVENSEGKQEA 98 (106)
T ss_dssp -CSSEEEEEECCCCSSCCSEEEECCBCSSCBCCE
T ss_pred -CCCEEEEEECcCCchhCEEEEEEEEeCCCeEEE
Confidence 112458999999999999999999999987543
No 416
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.26 E-value=3.3e-11 Score=93.24 Aligned_cols=94 Identities=27% Similarity=0.370 Sum_probs=76.8
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEE-EEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFK-IVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
+|.| ...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....+.. ....+....|.|.++...|.|.|+|.|.|
T Consensus 5 ~P~~-~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 5 PPRF-IQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEC-CCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeE-EeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 4555 334567889999999999999999999999999999887654332 33344456899999999999999999999
Q ss_pred CCCCceeeEEEEEecC
Q psy12426 294 SWGTDKGTAKVTVLDI 309 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~ 309 (616)
..|.....+.|.|...
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9999888888888654
No 417
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.26 E-value=1.7e-10 Score=103.34 Aligned_cols=162 Identities=17% Similarity=0.121 Sum_probs=113.1
Q ss_pred CCcceEEEcCCeEEEEEEEeeecCceeEEEECCeee------------cccCcEEEEecCCceEEEecCCCCCCcEEEEE
Q psy12426 222 QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITI------------ISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTL 289 (616)
Q Consensus 222 ~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c 289 (616)
.+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++.+.. ..|.|.+++..|.|.|+|
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~G~Y~C 82 (212)
T 1f97_A 7 AQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDNGEYTC 82 (212)
T ss_dssp SCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGCEEEEE
T ss_pred cCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccCeEEEE
Confidence 356788999999999999999999999999987652 1234444443 489999999999999999
Q ss_pred EEEcCCC--CceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-CCE--E------
Q psy12426 290 AVKNSWG--TDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET-GRW--V------ 358 (616)
Q Consensus 290 ~a~n~~g--~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~-~~~--~------ 358 (616)
.+.|..| .....+.+.+..+|..+..+.......+..+.|.|..... .+... +.|...+. ..- .
T Consensus 83 ~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~---~p~~~--i~W~~~~~~~l~~~~~~~~~~ 157 (212)
T 1f97_A 83 MVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDG---SPPSE--YSWFKDGISMLTADAKKTRAF 157 (212)
T ss_dssp EEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCC---BSCCE--EEEEETTEESBC-----CBSC
T ss_pred EEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccC---cCCCE--EEEEeCCcccccccccccccc
Confidence 9999877 3456777888877776543333445667889999983221 12222 22322211 100 0
Q ss_pred ----EccccccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 359 ----PMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 359 ----~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
.........+.|.++...+.+.|+|.|.|..|..
T Consensus 158 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 158 MNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp SSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCC
T ss_pred cCceeEecCCCceEEEEecChhhCcEEEEEEccccCCc
Confidence 0011234578999999999999999999999875
No 418
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.26 E-value=8.4e-12 Score=101.99 Aligned_cols=101 Identities=23% Similarity=0.197 Sum_probs=60.1
Q ss_pred CCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCC----C--ceeEeeeccCCccceeeccccC
Q psy12426 9 LGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDT----P--KGKVLDLIEGNHPIWEKCAQTE 82 (616)
Q Consensus 9 ~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~----~--~~~v~~~~~~~~p~w~~~~~~~ 82 (616)
|+++.|.+|+.|.|.|.+.|.|.|.|+|+|++........+.|.+...... . ....+. ..+ ...... ..
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~-~r~~i~--~~ 99 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLC--ETE-GRVRVE--TT 99 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCC--SCS-SSCEEE--EE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeec--CCC-CeEEEE--eC
Confidence 678999999999999999999999999999993111000001100000000 0 000000 000 000000 01
Q ss_pred CCCCceEecCcccCCeEEEEEEEEcCCCCCCC
Q psy12426 83 GDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 114 (616)
Q Consensus 83 ~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~ 114 (616)
.....|.|.++.+.|+|.|.|.|.|..|....
T Consensus 100 ~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~ 131 (139)
T 1gxe_A 100 KDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQV 131 (139)
T ss_dssp TTEEEEECSCCCTTTCEEEEEEEECSSCEEEE
T ss_pred CCEEEEEECCCCcccCEEEEEEEEeCCceEEE
Confidence 12347999999999999999999999996543
No 419
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.26 E-value=1.5e-11 Score=97.90 Aligned_cols=85 Identities=18% Similarity=0.225 Sum_probs=68.6
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee-ccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL-RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~-~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
+|.|. ..|+++.+.+|+.|.|.|.+.|.|.|.|.|+|++..+.. .++|.....+
T Consensus 15 ~p~f~-~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~------------------------ 69 (116)
T 2kkq_A 15 APMFI-YKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDN------------------------ 69 (116)
T ss_dssp CCCBS-SCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECT------------------------
T ss_pred CCeEE-eCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCC------------------------
Confidence 56776 459999999999999999999999999999999998874 4555433211
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCC
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 113 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 113 (616)
.....|.|.++...|.|.|.|.|.|..|...
T Consensus 70 ---~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 100 (116)
T 2kkq_A 70 ---TGRVTLLIKDVNKKDAGWYTVSAVNEAGVTT 100 (116)
T ss_dssp ---TCEEEEEEEEECGGGCEEEEEEEEETTEEEE
T ss_pred ---CCeEEEEECCCCcccCEEEEEEEEcCCCeEE
Confidence 0123799999999999999999999988654
No 420
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=99.26 E-value=3.3e-11 Score=100.52 Aligned_cols=111 Identities=18% Similarity=0.233 Sum_probs=83.4
Q ss_pred ceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEEc-cCCCCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeE
Q psy12426 366 TYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPITA-KDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQY 444 (616)
Q Consensus 366 ~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~~-~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y 444 (616)
.++.+.++. |..|.+..... +..+.. ......|.||.++++..++.++++|+|++|....+ |.+|
T Consensus 118 ts~~vgdg~-g~~~~~~~~~k-----------~v~i~~~tq~ev~p~Pp~NL~At~VT~tSVtLsW~aP~~~~G--I~gY 183 (238)
T 2w1n_A 118 TNSSVGDGE-GLVHEIAGTEK-----------TVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEG--LEGY 183 (238)
T ss_dssp EEEEEECTT-SCEEECBCEEE-----------EEEEECCCCCCCCCCCCEEEEEEEECSSCEEEEEECCSCCTT--EEEE
T ss_pred eeEEEecCC-CcEEEeeccce-----------eeeeccCCCCcCccCCCCceEEEEccCCeEEEEecCCCCCCC--ceeE
Confidence 446666777 77777665421 111111 11234678999999999999999999998876444 9999
Q ss_pred EEEEeeCCCCceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCCCC
Q psy12426 445 IIEKKPKYGPWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGEPS 495 (616)
Q Consensus 445 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~~s 495 (616)
+|++.. .....++.+.++|++.+|+|+|.|.|+|.|.|..|.+...
T Consensus 184 ~ly~~g-----~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~G~~Ss~ 229 (238)
T 2w1n_A 184 ILYKDG-----KKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSK 229 (238)
T ss_dssp EEEETT-----EEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCBCCC
T ss_pred EEEeCC-----ceeEEeeccceEEEecCCCCCCEEEEEEEEEeCCCCcccc
Confidence 999854 3445667778899999999999999999999999987654
No 421
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.26 E-value=2.6e-11 Score=92.31 Aligned_cols=89 Identities=31% Similarity=0.509 Sum_probs=72.7
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECC--eeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEE
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCND--ITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
+|.| ...+..+.+..|+.+.|.|.+.|.|.|.+.|++++ ..+..... +........|.|.++...|+|.|+|.|.
T Consensus 2 ~P~i-~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~--~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 2 KPKI-LTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELL--VDAKSSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCEE-CCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSE--EEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCeE-EcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEE--EEecCCEEEEEECCCChhcCEEEEEEEE
Confidence 4666 33456788999999999999999999999999999 77654432 3333455789999999999999999999
Q ss_pred cCCCCceeeEEEEE
Q psy12426 293 NSWGTDKGTAKVTV 306 (616)
Q Consensus 293 n~~g~~~~~~~l~v 306 (616)
|..|.....+.|.|
T Consensus 79 N~~G~~~~~~~l~V 92 (93)
T 1wit_A 79 NELGEDEAIFEVIV 92 (93)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEE
Confidence 99998877777765
No 422
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.25 E-value=6.7e-11 Score=108.13 Aligned_cols=123 Identities=10% Similarity=-0.034 Sum_probs=75.2
Q ss_pred CeEEeecccCCCeEEEEEEEEeCCCC---CCCCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEeee-c
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKGGP---GEPSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-P 244 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~g~---~~~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p 244 (616)
..|.|.+++.+|.|.|.|.+.|..+. ...... ..+.+.. ...+|.+....+....+..|+.+.|.|.+.+. |
T Consensus 72 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~-~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P 150 (238)
T 1bec_A 72 FSLILELATPSQTSVYFCASGGGRGSYAEQFFGPG-TRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFP 150 (238)
T ss_dssp EEEEESSCCGGGCEEEEEEEESCTTCGGGCEECCC-EEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBS
T ss_pred EEEEEecCCcccCEEEEEEEecCCCCccccccCCC-EEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeC
Confidence 47999999999999999999987421 101111 1233332 12466664443444445578999999999986 6
Q ss_pred Cc-eeEEEECCeeecccCcEE---E-EecCC---ceEEEecCCCCC-CcEEEEEEEEcCC
Q psy12426 245 IP-TKEWLCNDITIISKDRFK---I-VNDDK---STKLKVFDSKRG-DSGIYTLAVKNSW 295 (616)
Q Consensus 245 ~~-~~~W~~~~~~~~~~~~~~---~-~~~~~---~~~l~i~~l~~~-~~g~y~c~a~n~~ 295 (616)
.+ .+.|++++..+..+.... . ..++. ...|.|...... +.+.|+|.|.|..
T Consensus 151 ~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 151 DHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp CCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred CCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 54 999999998876442211 1 11221 012333322222 3678999999963
No 423
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.25 E-value=2.7e-11 Score=93.06 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=67.9
Q ss_pred CCCCCceEecCCCeEEEEEEEeee-cCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccccCCC
Q psy12426 6 RRHLGDIKLSAGTTLKFDANIIGE-PVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQTEGD 84 (616)
Q Consensus 6 ~~~~~~~~v~~g~~v~l~C~~~g~-P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~~~~ 84 (616)
..+|.++.+.+|+.+.|.|.+.|. |.|.|.|+|++..+...+.|.....+ .
T Consensus 5 ~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~----------------------------~ 56 (97)
T 2bk8_A 5 SGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYED----------------------------G 56 (97)
T ss_dssp ECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEET----------------------------T
T ss_pred eccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcC----------------------------C
Confidence 467899999999999999999997 99999999999988766676554211 1
Q ss_pred CCceEecCcccCCeEEEEEEEEcCCCCCCC
Q psy12426 85 TPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 114 (616)
Q Consensus 85 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~ 114 (616)
...|.|.++...|.|.|.|.|.|..|....
T Consensus 57 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 86 (97)
T 2bk8_A 57 VAILYVKDITKLDDGTYRCKVVNDYGEDSS 86 (97)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred eEEEEEecCChhhCeEEEEEEECCCCeEeE
Confidence 347999999999999999999999886543
No 424
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.25 E-value=5.4e-11 Score=108.31 Aligned_cols=166 Identities=19% Similarity=0.199 Sum_probs=113.2
Q ss_pred cceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEE-EecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeE
Q psy12426 224 SDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKI-VNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 302 (616)
Q Consensus 224 ~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~-~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~ 302 (616)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.. ........|.|.++...|.|.|+|.+.|..|......
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 668899999999999999999999999999998765433211 1122335899999999999999999999988887788
Q ss_pred EEEEecCCCCCCC-----CccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEe--CC------CCCEE-Ec-----ccc
Q psy12426 303 KVTVLDIPSPPEG-----PLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMD--ME------TGRWV-PM-----GDV 363 (616)
Q Consensus 303 ~l~v~~~p~~p~~-----~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~--~~------~~~~~-~~-----~~~ 363 (616)
.+.+...+..+.. +.......+..+.|.|...... ...+.+.+.. .+ ..... .. ...
T Consensus 107 ~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p----~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 182 (231)
T 3ojm_B 107 HLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDA----QPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSS 182 (231)
T ss_dssp EEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSS----CCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCS
T ss_pred EEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCC----CCEEEEEECCCCCCccccCCCcceEeEecccccccC
Confidence 8888765432210 1123445677899999753322 1222222210 10 00000 00 012
Q ss_pred ccceEEeccccCCCeEEEEEEEEecCcCCC
Q psy12426 364 SGTYTRAENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 364 ~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
....+.|.++...+.+.|+|.|.|..|...
T Consensus 183 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 212 (231)
T 3ojm_B 183 NAEVLALFNVTEADAGEYICKVSNYIGQAN 212 (231)
T ss_dssp CTTEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred CccEEEEecCCHHHCeEEEEEEEeccceEe
Confidence 235689999999999999999999998753
No 425
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=8.5e-12 Score=99.91 Aligned_cols=83 Identities=17% Similarity=0.240 Sum_probs=68.5
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeee-ccceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNL-RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~-~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
||.|. ..+.++.+.+|+.+.|.|.+.|.|.|.|+|+|+|..+.. .++|...
T Consensus 8 pP~i~-~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~--------------------------- 59 (118)
T 2eo9_A 8 PPVIR-QGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQL--------------------------- 59 (118)
T ss_dssp SCCCS-BCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEE---------------------------
T ss_pred CCEEE-cCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEc---------------------------
Confidence 57776 458999999999999999999999999999999988863 3443322
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
....|.|.++...|.|.|.|.|.|..|.....
T Consensus 60 ----~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (118)
T 2eo9_A 60 ----ENGVLQIRYAKLGDTGRYTCIASTPSGEATWS 91 (118)
T ss_dssp ----ETTEEEEESCCGGGCCCEEEEEECSSCEEEEE
T ss_pred ----cCCEEEEccCCcCCCEEEEEEEEcCCCcEEEE
Confidence 13589999999999999999999999875443
No 426
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.25 E-value=3e-11 Score=95.33 Aligned_cols=103 Identities=18% Similarity=0.192 Sum_probs=80.8
Q ss_pred EEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCC---CCc-eEEEEEEEEeCCCCCEEEccccccceEEeccccCCCe
Q psy12426 303 KVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDG---GTD-ILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHD 378 (616)
Q Consensus 303 ~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~---~~~-i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~ 378 (616)
.+.+..+|.+|..+ .+..+..+++.|+|.+|.+++ +.. |..|.|+..+.....|..+.....+.+++.+|.+++.
T Consensus 9 ~~~~~~pp~~P~~p-~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~~~~t~~~v~gL~p~t~ 87 (120)
T 1wfu_A 9 EPHKVVPLSKPHPP-VVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTL 87 (120)
T ss_dssp CCTTCCCCCCCCCC-BCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCE
T ss_pred EEEeeCCCCCCCCc-eeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEecCCccEEEECCCCCCCE
Confidence 34556677788764 567889999999999988776 555 9999999655566788887666567899999999999
Q ss_pred EEEEEEEEecCcCCCCccccCCEEccCCCCC
Q psy12426 379 YNFRVKAVNKIGESLPLVCQSPITAKDPFGR 409 (616)
Q Consensus 379 y~~~v~a~n~~g~~~~~~~s~~~~~~~~~~~ 409 (616)
|.|||+|.|..|.+.++ ..+.+.+...+
T Consensus 88 Y~frV~A~n~~G~s~~S---~~~~~~T~~~p 115 (120)
T 1wfu_A 88 YKFRLKVTSPSGEYEYS---PVVSVATTRES 115 (120)
T ss_dssp EEEEEEEECSSSCEEEC---CCEEEECCCCC
T ss_pred EEEEEEEECCCCCCCCC---ccEeeEcCCCC
Confidence 99999999999998874 44555554443
No 427
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.24 E-value=8.1e-11 Score=91.00 Aligned_cols=92 Identities=33% Similarity=0.611 Sum_probs=78.1
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeec--ccCcEEEEecCCceEEEecCCCCCCcEEEEEEEE
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITII--SKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~--~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
+|.+ ...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+...+....|.|.++...|.|.|+|.|.
T Consensus 5 pP~i-~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 5 PPKI-EALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEE-CCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCee-ecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 3455 344567889999999999999999999999999999876 4467777777667899999999999999999999
Q ss_pred cCCCCceeeEEEEEe
Q psy12426 293 NSWGTDKGTAKVTVL 307 (616)
Q Consensus 293 n~~g~~~~~~~l~v~ 307 (616)
|..|.....+.+.+.
T Consensus 84 n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEEE
Confidence 999988877777765
No 428
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=3.3e-12 Score=99.49 Aligned_cols=87 Identities=25% Similarity=0.451 Sum_probs=72.3
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
.+|.+|.++++..++.+++.|+|.+|. +.+.+|+|+|+..++ .+.....+.+....++|.+|.|++.|.|+|+|+
T Consensus 6 ~~p~~P~~l~v~~~t~~si~lsW~~p~----g~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~ 81 (105)
T 2ekj_A 6 SGRSPPSNLALASETPDSLQVSWTPPL----GRVLHYWLTYAPASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAI 81 (105)
T ss_dssp TTCCCCEEEEEEEEETTEEEEEEECCS----SCCSBBCBBCCCTTSCSCCCCBCCBTTSSEEEECSCCSSCCCBCBBCBB
T ss_pred cCCCCCCceEEEeCCCCEEEEEEeCCC----CcceEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 578899999999999999999999873 368999999987654 222223456778999999999999999999999
Q ss_pred cCCCCCCCCCCC
Q psy12426 487 NKGGPGEPSKAS 498 (616)
Q Consensus 487 n~~G~g~~s~~~ 498 (616)
|..|.|+++...
T Consensus 82 ~~~g~g~~s~~~ 93 (105)
T 2ekj_A 82 YAAGRSEAVSAT 93 (105)
T ss_dssp CSSCBCCCBCCB
T ss_pred eCCccCCccccE
Confidence 999999877643
No 429
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=4.8e-11 Score=92.24 Aligned_cols=93 Identities=20% Similarity=0.319 Sum_probs=76.6
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecc-cCcEEEEecCCceEEEecCCCCCCcEEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS-KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
.+|.| ...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+... ..|.|.++...|.|.|+|.|.
T Consensus 7 ~~P~i-~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 7 GPPII-LQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQ---GTLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp SSCEE-EECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTT---CCEEEESCCTTTCCEEEEEEE
T ss_pred CCCEE-EeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCC---CEEEEccCCcccCEEEEEEEE
Confidence 45666 3446778899999999999999999999999999988763 344444333 379999999999999999999
Q ss_pred cCCCCceeeEEEEEecCC
Q psy12426 293 NSWGTDKGTAKVTVLDIP 310 (616)
Q Consensus 293 n~~g~~~~~~~l~v~~~p 310 (616)
|..|.....+.|.|..+|
T Consensus 83 n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 83 SSSGETSWSAVLDVTESG 100 (100)
T ss_dssp CSSCCCBCCEEEEEESCC
T ss_pred cCCCCEEEEEEEEEecCC
Confidence 999998888888887653
No 430
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.24 E-value=1e-11 Score=97.48 Aligned_cols=84 Identities=20% Similarity=0.304 Sum_probs=68.0
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|. ..+.++.+.+|+.+.|.|.+.|.|.|.|.|+|++..+...+.|....
T Consensus 13 ~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~--------------------------- 64 (107)
T 3irg_B 13 PPCFL-RFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPA--------------------------- 64 (107)
T ss_dssp EEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCE---------------------------
T ss_pred CCeeE-cCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEe---------------------------
Confidence 46666 44789999999999999999999999999999999887555553321
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 113 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 113 (616)
......|.|.++...|.|.|.|.|.|..|...
T Consensus 65 -~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~ 96 (107)
T 3irg_B 65 -DGAEHGLLLTAALPTDAGVYVCRARNAAGEAY 96 (107)
T ss_dssp -ETTEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred -CCCEEEEEEccCCHHhCEEEEEEEEcCCCcEE
Confidence 11133799999999999999999999888643
No 431
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=99.24 E-value=2.7e-11 Score=95.31 Aligned_cols=79 Identities=22% Similarity=0.325 Sum_probs=65.9
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAV 486 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~ 486 (616)
+.|++|.++.+..++.+++.|+|.+|. +.+.+|.|.|+..++ .+.....+++...+++|.+|.|++.|.|+|+|.
T Consensus 2 GvP~~P~~L~v~~~t~~Sv~lsW~~p~----g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 2 GVSDVPRDLEVVAATPTSLLISWDSGR----GSYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAV 77 (114)
T ss_dssp ---CCCEEEEEEEEETTEEEEEEECCS----CCCSEEEEEEEESSCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCCceEEEecCCCEEEEEEcCCc----CcccEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 578999999999999999999999763 358999999998765 333444566778999999999999999999999
Q ss_pred cCCC
Q psy12426 487 NKGG 490 (616)
Q Consensus 487 n~~G 490 (616)
|..|
T Consensus 78 ~~~G 81 (114)
T 3qwq_B 78 TDHK 81 (114)
T ss_dssp EEEE
T ss_pred ECCc
Confidence 9999
No 432
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.23 E-value=6.8e-11 Score=91.21 Aligned_cols=93 Identities=30% Similarity=0.549 Sum_probs=76.0
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccC-cEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD-RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
+|.+ ...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++.....+....|.|.++...|.|.|+|.|.|
T Consensus 5 ~P~~-~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 5 PPTF-KVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEE-EECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEE-EEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 4555 334567789999999999999999999999999999886554 44444455556899999999999999999999
Q ss_pred CCCCceeeEEEEEec
Q psy12426 294 SWGTDKGTAKVTVLD 308 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~ 308 (616)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999888888877753
No 433
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.23 E-value=4.2e-10 Score=100.44 Aligned_cols=182 Identities=16% Similarity=0.131 Sum_probs=121.3
Q ss_pred CCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc---cccceEEecccc--CCCeEEEEEEEEe
Q psy12426 313 PEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD---VSGTYTRAENLI--EGHDYNFRVKAVN 387 (616)
Q Consensus 313 p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~--~~~~y~~~v~a~n 387 (616)
|.+ +.+...... ..|.|+++... ......|.++|...+...|..... ...+.+.|.++. ....|.+||+|.+
T Consensus 12 P~n-v~~~s~n~~-~iL~W~p~~~~-~~~~~~Y~Vqy~~~~~~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~A~~ 88 (221)
T 4doh_R 12 PAN-ITFLSINMK-NVLQWTPPEGL-QGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVRAIW 88 (221)
T ss_dssp CEE-EEEEEETTE-EEEEEECCCCS-SCCCCEEEEEEEETTSCCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEEEES
T ss_pred Cce-eEEEEECCc-EEEEEcCCCCC-CCCCeEEEEEEEECCCCCceecccccCCCCCEEeCCCccccCCCCEEEEEEEEc
Confidence 444 666655444 46999975432 245789999998766677876533 456778888764 4668999999998
Q ss_pred cCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCCC----CCC--------cceeEEEEEeeCCCCc
Q psy12426 388 KIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKKD----GGS--------PISQYIIEKKPKYGPW 455 (616)
Q Consensus 388 ~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~----~~~--------~i~~Y~i~~~~~~~~~ 455 (616)
+.+.+.++.. ..+... .....++|. +.+. ...++|.|.|.+|... ++. ....|.|.|.+.++..
T Consensus 89 g~~~S~w~~~-~~F~p~-~~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~ 164 (221)
T 4doh_R 89 GTKCSKWAES-GRFYPF-LETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNR 164 (221)
T ss_dssp SSCBCCCEEC-CCBCHH-HHCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTE
T ss_pred CCcccCCEec-Cceech-hhCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCc
Confidence 7776655431 111110 113445554 7766 5778999999987642 121 1358999998876532
Q ss_pred eEeEeecCCccEEEcCCCCCCCeEEEEEEEEcC--CCCCCCCCCCCCEEe
Q psy12426 456 EKACIVPANITATSVPDLKEGEEYEFRVIAVNK--GGPGEPSKASAPVTC 503 (616)
Q Consensus 456 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~--~G~g~~s~~~~~~~~ 503 (616)
...... ....+.|.+|.|++.|.|+|+|... .|.|.+|....+.|.
T Consensus 165 ~~~~~~--~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~ 212 (221)
T 4doh_R 165 TWSQCV--TNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTL 212 (221)
T ss_dssp EEEEEE--CSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECC
T ss_pred EEEEee--cCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecC
Confidence 222222 3468999999999999999999975 688888876554443
No 434
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=1.8e-11 Score=96.66 Aligned_cols=100 Identities=22% Similarity=0.344 Sum_probs=83.5
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEE-ecCCceEEEecCCCCCCcEEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIV-NDDKSTKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
.+|.|. ..+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....+.... .......|.|.++...|.|.|+|.|.
T Consensus 8 ~~P~i~-~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 8 FRPHFL-QAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCEEE-ECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCcEE-eCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 456663 4457789999999999999999999999999999887765544433 33445789999999999999999999
Q ss_pred cCCCCceeeEEEEEecCCCCCC
Q psy12426 293 NSWGTDKGTAKVTVLDIPSPPE 314 (616)
Q Consensus 293 n~~g~~~~~~~l~v~~~p~~p~ 314 (616)
|..|.....+.|.|..+|.+|.
T Consensus 87 n~~g~~~~~~~l~V~~~p~~P~ 108 (110)
T 2dm3_A 87 NRAGQNSFSLELVVAAKESGPS 108 (110)
T ss_dssp CSSCEEEECCEEEEECCCCSSS
T ss_pred CCCCEEEEEEEEEEeCCCCCCC
Confidence 9999999999999999888775
No 435
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.23 E-value=1.2e-10 Score=106.11 Aligned_cols=131 Identities=12% Similarity=0.000 Sum_probs=75.9
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCCC------CCCCCCCCEEec-cccCCCceeccCCcceEEEcCCeEEEEEEEeee
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGPG------EPSDPTAPHIAR-AKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE 243 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~~------~~s~~~~~~~~~-~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~ 243 (616)
...|.|.+++++|.|.|.|.+.+..+.. .... ...+.+. ....+|.+....+ ...+..|+.+.|.|.+.+.
T Consensus 82 ~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~-~~~l~V~~~~~~~P~v~~~~~-~~~~~~g~~v~L~C~~~~~ 159 (232)
T 3qhz_H 82 QVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGR-GTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDY 159 (232)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECC-CEEEEECSSCCBCCEEEEECC--------CEEEEEEEEEEE
T ss_pred EEEEEECcCChhhCEEEEEEEeeccCccccccceeeCC-CeEEEEecCCCCCCEEEEecc-cccccCCCcEEEEEEEeeE
Confidence 3479999999999999999998763211 0111 1123333 2334565532222 2345579999999999986
Q ss_pred cC--ceeEEEECCeeecccCcEEEEecCC----ceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy12426 244 PI--PTKEWLCNDITIISKDRFKIVNDDK----STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 304 (616)
Q Consensus 244 p~--~~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l 304 (616)
++ ..+.|++++..+...........++ .+.|.|......+ |.|+|.+.|..+.......+
T Consensus 160 ~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l 225 (232)
T 3qhz_H 160 FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRV 225 (232)
T ss_dssp BSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEEC
T ss_pred eCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEe
Confidence 54 3577999886432110000111111 1368888888778 99999999977665544443
No 436
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.23 E-value=7.4e-11 Score=91.67 Aligned_cols=89 Identities=22% Similarity=0.353 Sum_probs=76.0
Q ss_pred ccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccC--cEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCC
Q psy12426 220 RDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD--RFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGT 297 (616)
Q Consensus 220 ~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~ 297 (616)
...+.++.+.+|+++.|.|.+.+ |.+.+.|++++..+.... ++.+...+....|.|.++...|.|.|+|.|.|
T Consensus 11 ~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n---- 85 (103)
T 1x44_A 11 TKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG---- 85 (103)
T ss_dssp SBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT----
T ss_pred eccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC----
Confidence 45567789999999999999987 779999999999987776 66877777778999999999999999999977
Q ss_pred ceeeEEEEEecCCCCC
Q psy12426 298 DKGTAKVTVLDIPSPP 313 (616)
Q Consensus 298 ~~~~~~l~v~~~p~~p 313 (616)
....+.|.|..+|.++
T Consensus 86 ~~~~~~l~V~~~p~p~ 101 (103)
T 1x44_A 86 GQSSAKLSVDLKSGPS 101 (103)
T ss_dssp EEEEEEEEEECCCSCC
T ss_pred CcEEEEEEEeCCCCCC
Confidence 5667788888877654
No 437
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.23 E-value=3.1e-10 Score=100.21 Aligned_cols=167 Identities=7% Similarity=-0.006 Sum_probs=107.9
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
.|.+... +.. .+.+|+.+.|.|.+.+ +.+.+.|++++..+.... ...........|.|.++...|+|.|+|.|.|.
T Consensus 5 ~P~i~~~-p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 5 KPTLWAE-PGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDR-QNPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CCEEEEE-SCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEE-ECCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCEEEcc-CCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccc-cccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 4555433 344 7889999999999988 778999999998764321 11111234568999999999999999999998
Q ss_pred CC--CceeeEEEEEecCCCCCCCCc--cceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCC------EEEccccc
Q psy12426 295 WG--TDKGTAKVTVLDIPSPPEGPL--KPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGR------WVPMGDVS 364 (616)
Q Consensus 295 ~g--~~~~~~~l~v~~~p~~p~~~~--~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~------~~~~~~~~ 364 (616)
.| ..+..+.+.+...+.+|.-.. ......+..++|.|.... ....| .|...+... ........
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~-----~~~~~--~w~k~g~~~~~~~~~~~~~~~~~ 153 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRS-----PMDTF--LLCKERAAHPLLCLRSEHGAQQH 153 (196)
T ss_dssp TEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEE-----EEEEE--EEEETTCCCGGGSEEEEEEEEEE
T ss_pred CcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCC-----CCCEE--EEEeCCCcccceeecccccccCc
Confidence 87 335566777765443332100 112345778999997532 11223 333322211 00001123
Q ss_pred cceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 365 GTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 365 ~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
...+.|.++...+.+.|+|.|.|..+..
T Consensus 154 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~~ 181 (196)
T 3p2t_A 154 QAEFPMSPVTSVHGGTYRCFSSHGFSHY 181 (196)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECGGGTT
T ss_pred ceEEEeCCCcccCCCeEEEEEEcCCCCc
Confidence 4568999999999999999999988743
No 438
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=1e-11 Score=95.95 Aligned_cols=82 Identities=22% Similarity=0.376 Sum_probs=65.9
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|.. .+.++.+.+|+.+.|.|.+.|.|.|.|.|+|+|..+.....+ -
T Consensus 11 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~-~----------------------------- 59 (99)
T 2yr3_A 11 APSFSS-VLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARST-C----------------------------- 59 (99)
T ss_dssp EEEEEE-CCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCE-E-----------------------------
T ss_pred CCceee-cCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceE-e-----------------------------
Confidence 466664 488999999999999999999999999999999887632111 0
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 114 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~ 114 (616)
......|.|.++.+.|.|.|.|.|.|..|....
T Consensus 60 -~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~ 92 (99)
T 2yr3_A 60 -EAGVAELHIQDALPEDHGTYTCLAENALGQVSC 92 (99)
T ss_dssp -ETTEEEEEECSCCTTCCBCEEEEEECSSCEEEE
T ss_pred -eCCeEEEEECCCChhhCEEEEEEEEECCCeEEE
Confidence 112357999999999999999999999986543
No 439
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=7.3e-11 Score=91.95 Aligned_cols=84 Identities=15% Similarity=0.240 Sum_probs=73.8
Q ss_pred eEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEE
Q psy12426 226 IKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVT 305 (616)
Q Consensus 226 ~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~ 305 (616)
+.+..|+.+.|.|.+.+.|.+ +.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|.. ..+.+.
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~----~~~~l~ 94 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVS----AFFGVT 94 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCC----CCEEEE
T ss_pred EEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCce----EEEEEE
Confidence 788999999999999999998 999999999887788888777777899999999999999999998863 367788
Q ss_pred EecCCCCCC
Q psy12426 306 VLDIPSPPE 314 (616)
Q Consensus 306 v~~~p~~p~ 314 (616)
|..+|.+|.
T Consensus 95 V~~~P~pp~ 103 (104)
T 2e6p_A 95 VQDPSGPSS 103 (104)
T ss_dssp EECCCCSSC
T ss_pred EcCCCCCcC
Confidence 888877664
No 440
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.22 E-value=8.8e-11 Score=104.39 Aligned_cols=162 Identities=14% Similarity=0.013 Sum_probs=106.8
Q ss_pred cceEEEcCCeEEEEEEEeeecC-----ceeEEEE-CCeeecccCcEEEEec---CCceEEEecCCCCCCcEEEEEEEEcC
Q psy12426 224 SDIKVRAGSNFEFDINVIGEPI-----PTKEWLC-NDITIISKDRFKIVND---DKSTKLKVFDSKRGDSGIYTLAVKNS 294 (616)
Q Consensus 224 ~~~~v~~g~~~~l~c~~~~~p~-----~~~~W~~-~~~~~~~~~~~~~~~~---~~~~~l~i~~l~~~~~g~y~c~a~n~ 294 (616)
..+.+..|+.+.|.|.+.+.|. +.+.|++ ++.......+..+... .....|.|.+++..|.|.|+|.+.|.
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 89 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICG 89 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeC
Confidence 4578999999999999999886 8999999 4444433455554432 14468999999999999999999998
Q ss_pred CCCceeeEEEEEecCCCCCCCCccc-eeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEc---cccccceEEe
Q psy12426 295 WGTDKGTAKVTVLDIPSPPEGPLKP-SNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPM---GDVSGTYTRA 370 (616)
Q Consensus 295 ~g~~~~~~~l~v~~~p~~p~~~~~~-~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~---~~~~~~~~~i 370 (616)
.|.....+.|.+..++..|. +.+ ....+..+.|.|..... +.. .+.|...+....... .......+.+
T Consensus 90 ~~~~~~~~~l~V~~~~~~p~--~~~~~~~~g~~v~l~C~~~g~----P~p--~v~W~~~~~~~~~~~~~~~~~~~~~~~i 161 (202)
T 3bp6_B 90 AAWDYKYLTVKVKASYMRID--TRILEVPGTGEVQLTCQARGY----PLA--EVSWQNVSVPANTSHIRTPEGLYQVTSV 161 (202)
T ss_dssp TEEEEEEEEEEEEBCCCCEE--EEEEECTTTCCEEEEEEEEEB----SCC--EEEETTCCSCCEEEEEECTTSCEEEEEE
T ss_pred CCcceEEEEEEecCCCCccc--EEEEecCCCCeEEEEEEcccc----CCc--eEEEEeCCCCccCceeeCCCCCEEEEEE
Confidence 88777888888887665443 222 33456778888875221 111 233332222111111 1111233455
Q ss_pred ccccCCCeEEEEEEEEecCcCCC
Q psy12426 371 ENLIEGHDYNFRVKAVNKIGESL 393 (616)
Q Consensus 371 ~~L~~~~~y~~~v~a~n~~g~~~ 393 (616)
..+...+.+.|.|.|.|..|...
T Consensus 162 ~~v~~~d~G~Y~C~a~N~~g~~~ 184 (202)
T 3bp6_B 162 LRLKPQPSRNFSCMFWNAHMKEL 184 (202)
T ss_dssp EEECCCTTCCEEEEEEETTTTEE
T ss_pred EEEEcCCCCEEEEEEEcCCcccc
Confidence 57777788899999999998653
No 441
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.22 E-value=1.3e-11 Score=96.58 Aligned_cols=78 Identities=13% Similarity=0.170 Sum_probs=65.6
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|. ..++++.+.+|+++.|.|.+.|.|.| |+|+|+|..+...++|.....
T Consensus 8 ~p~~~-~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~-------------------------- 59 (106)
T 2dlt_A 8 QLEVL-QDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHV-------------------------- 59 (106)
T ss_dssp CCCEE-ECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEE--------------------------
T ss_pred CCEEe-cCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEe--------------------------
Confidence 45555 55899999999999999999999998 999999999887777765421
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNK 108 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~ 108 (616)
.....|.|.++...|.|.|.|.|.|.
T Consensus 60 --~~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 60 --GRFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp --TTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred --CCEEEEEECCCCcCCCEEEEEEEccC
Confidence 12357999999999999999999987
No 442
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.22 E-value=6.4e-11 Score=92.32 Aligned_cols=84 Identities=18% Similarity=0.353 Sum_probs=69.1
Q ss_pred CCCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCCC---------ceEeEeecCCccEEEcCCCCCCC
Q psy12426 407 FGRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYGP---------WEKACIVPANITATSVPDLKEGE 477 (616)
Q Consensus 407 ~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~~---------~~~~~~~~~~~~~~~l~~L~p~t 477 (616)
...|.+|.+|++..++.++++|+|.+|. +.+.+|+|+|...++. ......++++..+++|.+|.|++
T Consensus 6 ~~~pp~p~~L~v~~~T~~Si~LsW~~p~----g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~PgT 81 (112)
T 2cui_A 6 SGSRPRLSQLSVTDVTTSSLRLNWEAPP----GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGT 81 (112)
T ss_dssp CCCCCCCCCCEEESCCSSCEEEECCCCT----TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTC
T ss_pred CCCCCCCCceEEEeecCCeEEEEECCCC----CCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCCC
Confidence 3567889999999999999999999763 2588999999876542 13345667788999999999999
Q ss_pred eEEEEEEEEcCCCCCCC
Q psy12426 478 EYEFRVIAVNKGGPGEP 494 (616)
Q Consensus 478 ~Y~~~v~a~n~~G~g~~ 494 (616)
.|.|+|+|++..|.|.+
T Consensus 82 ~Y~~~V~A~~~~~~s~p 98 (112)
T 2cui_A 82 LYSLTLYGLRGPHKADS 98 (112)
T ss_dssp EEEEEEEEECSSSEEEE
T ss_pred EEEEEEEEEECCcccCC
Confidence 99999999998776653
No 443
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.21 E-value=1.2e-10 Score=102.38 Aligned_cols=160 Identities=16% Similarity=0.220 Sum_probs=111.4
Q ss_pred CcceEEEcCCeEEEEEEEeeec-CceeEEEE-CCeeec-ccCcEEEEe-cCCceEEEecCCCCCCcEEEEEEEEcCCC-C
Q psy12426 223 LSDIKVRAGSNFEFDINVIGEP-IPTKEWLC-NDITII-SKDRFKIVN-DDKSTKLKVFDSKRGDSGIYTLAVKNSWG-T 297 (616)
Q Consensus 223 ~~~~~v~~g~~~~l~c~~~~~p-~~~~~W~~-~~~~~~-~~~~~~~~~-~~~~~~l~i~~l~~~~~g~y~c~a~n~~g-~ 297 (616)
+.+..+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+. ...++.+.. ......|.|.++...|.|.|+|.+.|..| .
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 88 (191)
T 1epf_A 9 PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQ 88 (191)
T ss_dssp SSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEE
T ss_pred CCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcc
Confidence 4667899999999999999987 78999999 887776 345555443 35567999999999999999999999874 4
Q ss_pred ceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCC-------CCCEEEccccccceEEe
Q psy12426 298 DKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDME-------TGRWVPMGDVSGTYTRA 370 (616)
Q Consensus 298 ~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~-------~~~~~~~~~~~~~~~~i 370 (616)
....+.+.+..+|.....+.......+..+.|.|...... ... +.|...+ ...... .....+.|
T Consensus 89 ~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p----~~~--v~W~~~~~~~~~~~~~~~~~---~~~~~L~i 159 (191)
T 1epf_A 89 SEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSL----PPT--IIWKHKGRDVILKKDVRFIV---LSNNYLQI 159 (191)
T ss_dssp EEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSS----CCE--EEEEETTEEGGGGCCTTEEE---CTTSCEEE
T ss_pred eEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCC----CCE--EEEEECCEEeeccCCceEEE---ecCCeEEE
Confidence 5666777777665433222223445677888999864322 122 2232211 111111 12336899
Q ss_pred ccccCCCeEEEEEEEEecCcC
Q psy12426 371 ENLIEGHDYNFRVKAVNKIGE 391 (616)
Q Consensus 371 ~~L~~~~~y~~~v~a~n~~g~ 391 (616)
.++...+.+.|+|.|.|..|.
T Consensus 160 ~~~~~~d~G~Y~C~a~n~~~~ 180 (191)
T 1epf_A 160 RGIKKTDEGTYRCEGRILARG 180 (191)
T ss_dssp TTCCGGGCEEEEEEEEEGGGT
T ss_pred CCCChhhCEEEEEEEEEecce
Confidence 999999999999999997754
No 444
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.21 E-value=1e-11 Score=98.29 Aligned_cols=89 Identities=13% Similarity=0.055 Sum_probs=62.2
Q ss_pred CCCCCCceEecCCCeEEEEEEEeee---cCCeeeeeeCCee-eee--ccceEEEeecCCCCCceeEeeeccCCccceeec
Q psy12426 5 DRRHLGDIKLSAGTTLKFDANIIGE---PVPHVDWRAGGNP-LNL--RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKC 78 (616)
Q Consensus 5 ~~~~~~~~~v~~g~~v~l~C~~~g~---P~p~v~W~~~~~~-l~~--~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~ 78 (616)
+.+.|+++.|.+|++++|.|.+.|. |.|.|+|||++.. +.. ...+.-.... .
T Consensus 10 F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~----------------------~ 67 (126)
T 2dav_A 10 FIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETF----------------------E 67 (126)
T ss_dssp CCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEE----------------------E
T ss_pred EEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEcccc----------------------c
Confidence 3456899999999999999998875 8999999997421 110 1222221100 0
Q ss_pred cccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 79 AQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 79 ~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
........+|.|.++.+.|.|.|+|.|.|..|.....
T Consensus 68 ~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~g~~~~~ 104 (126)
T 2dav_A 68 RHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCS 104 (126)
T ss_dssp TTTTEEEEEEEECSCCTTSCEEEEEEEECSSCEEEEC
T ss_pred cccccceEEEEEccCCcccCEEEEEEEEeCCCcEEEE
Confidence 0001123689999999999999999999998876555
No 445
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=2.2e-10 Score=90.21 Aligned_cols=96 Identities=29% Similarity=0.412 Sum_probs=80.2
Q ss_pred cCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc--cccceEEeccccCCCeEEEEEEE
Q psy12426 308 DIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD--VSGTYTRAENLIEGHDYNFRVKA 385 (616)
Q Consensus 308 ~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~~~~~y~~~v~a 385 (616)
.+|.+|.+ +.+.....+.+.|+|.+|..+++..+.+|.|+++..+...|..+.. .....+.+.+|.+++.|.|+|+|
T Consensus 6 ~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A 84 (110)
T 2yuw_A 6 SGTSPPTL-LTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKA 84 (110)
T ss_dssp CCSCCCEE-EEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEE
T ss_pred CCCCCCCc-cEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEeccccCccCEEEECCCCCCCEEEEEEEE
Confidence 35666665 6777888899999999988777778999999999887788988754 35778999999999999999999
Q ss_pred EecCcCCCCccccCCEEcc
Q psy12426 386 VNKIGESLPLVCQSPITAK 404 (616)
Q Consensus 386 ~n~~g~~~~~~~s~~~~~~ 404 (616)
.|..|.+.++..+..+++.
T Consensus 85 ~n~~G~s~~S~~~~~v~~~ 103 (110)
T 2yuw_A 85 VNAAGASEPKYYSQPILVK 103 (110)
T ss_dssp EETTEECCCEECSSCEECC
T ss_pred EcCCcCCCCcCCCCCEEec
Confidence 9999999888766666543
No 446
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.21 E-value=6.5e-11 Score=109.96 Aligned_cols=243 Identities=12% Similarity=0.014 Sum_probs=81.1
Q ss_pred CCceEecCCCeEEEEEEEeeecCCe-eeeee----C-----Cee---eee-----ccceEEEeecCCCCCce-eEe-eec
Q psy12426 9 LGDIKLSAGTTLKFDANIIGEPVPH-VDWRA----G-----GNP---LNL-----RPIWEKCAQTEGDTPKG-KVL-DLI 68 (616)
Q Consensus 9 ~~~~~v~~g~~v~l~C~~~g~P~p~-v~W~~----~-----~~~---l~~-----~G~Y~C~a~n~~~~~~~-~v~-~~~ 68 (616)
|++..|.+|+.+.|+|.+. .+.|. +.|.- . |.. +.. .|.|.|.+... +.... .+. .+.
T Consensus 6 P~~~~V~~G~sv~l~Cs~~-c~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~~~y~C~~~~~-~~~~~~~v~l~V~ 83 (291)
T 1mq8_A 6 PSKVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCP-DGQSTAKTFLTVY 83 (291)
T ss_dssp CSEEEECTTCEEEEEEEEC-CSSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCSCCCCEEEEECS-SCEEEEECEEEEC
T ss_pred CCccEEcCCCeEEEEEeCC-CCCCccceEEecCCCcccccCCCceEEEEEEecccCCeEEEEEEcC-CccEEEEEEEEEe
Confidence 6788999999999999986 45555 88861 1 111 111 68999998643 22111 111 110
Q ss_pred cCCccceeeccccCCCCCceEe--cCcccCCeEEEEEEEEcCCCCCCCCCCCCcceeecCCCceeeeecCccc--ccEEE
Q psy12426 69 EGNHPIWEKCAQTEGDTPKGKV--LDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKGKCYHLVGTLLK--DSIYE 144 (616)
Q Consensus 69 ~~~~p~w~~~~~~~~~~~~l~i--~~l~~~~~~~y~c~a~n~~g~~~~~~~~~~~~~~~~~p~~~~~~g~p~~--~~~~~ 144 (616)
. .|. .-.+.. ..+..|+.+.+.|.+.+ +.|.. .++|+
T Consensus 84 ~--~P~----------~v~I~~~~~~~~~G~~~~LtC~v~g---------------------------~~P~~~l~itW~ 124 (291)
T 1mq8_A 84 W--TPE----------RVELAPLPSWQPVGKNLTLRCQVEG---------------------------GAPRANLTVVLL 124 (291)
T ss_dssp B--CCS----------CCCBCCCCSBCCSSCCCEEEEEECC---------------------------CBSTTTEEEEEE
T ss_pred c--CCC----------CCEEecCCccccCCCCEEEEEEecC---------------------------ccCCCCcEEEEE
Confidence 0 000 111111 22778999999999872 22333 36887
Q ss_pred EeeccCcccccccCCCceEecccCCCCCeEEeecccCCCeEEEEEEEEeCCCC-CC-C-CCCCCCEEeccccCCCcee-c
Q psy12426 145 QLKRSGLFDQFHLCPIWEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGP-GE-P-SDPTAPHIARAKKVSPYIN-R 220 (616)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~-~~-~-s~~~~~~~~~~~~~~P~~~-~ 220 (616)
+ .+..+. .. ..........|.+.....++...|+|+|.|..+. +. . ..............|+... .
T Consensus 125 k--g~~~l~----~~----~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~ 194 (291)
T 1mq8_A 125 R--GEKELK----RE----PAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQL 194 (291)
T ss_dssp S--SSSEEE----EE----ECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC----------
T ss_pred E--CCEEee----cc----cCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCcee
Confidence 7 422211 00 0011112235667777777778999999998763 21 0 0011112222222222211 1
Q ss_pred cCCcceEEEcCCeEEEEEEEeeecCc---eeEEEECCeeecccCcEEEEecCCceEEEecCC---CC--CCcEEEEEEEE
Q psy12426 221 DQLSDIKVRAGSNFEFDINVIGEPIP---TKEWLCNDITIISKDRFKIVNDDKSTKLKVFDS---KR--GDSGIYTLAVK 292 (616)
Q Consensus 221 ~~~~~~~v~~g~~~~l~c~~~~~p~~---~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l---~~--~~~g~y~c~a~ 292 (616)
.. ...+.+|+.+.|.|.+.|.+++ .+.|.++|..+.... ...++ .+.+..+ .. ++.|.|+|.|.
T Consensus 195 ~~--p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~----~~~g~--~~~~~~~~~~~~~~~~~~~~~C~~~ 266 (291)
T 1mq8_A 195 VS--PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTV----TYGND--SFSAKASVSVTAEDEGTQRLTCAVI 266 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cC--CcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCcee----eecCC--eEEEEEecceeEcCCCCEEEEEEEE
Confidence 11 2257799999999999998554 699999998775321 11121 2333332 23 34677778888
Q ss_pred cCCCCceeeEEEEEecCC
Q psy12426 293 NSWGTDKGTAKVTVLDIP 310 (616)
Q Consensus 293 n~~g~~~~~~~l~v~~~p 310 (616)
+..........++|..-|
T Consensus 267 ~~~~~~~~~~~l~v~~~~ 284 (291)
T 1mq8_A 267 LGNQSQETLQTVTIYSFP 284 (291)
T ss_dssp ------------------
T ss_pred eCCcceEEEEEEEEEcCC
Confidence 754445555556665543
No 447
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=7.4e-12 Score=98.90 Aligned_cols=87 Identities=20% Similarity=0.400 Sum_probs=68.6
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|.. .+.++.+.+|+.+.|.|.+.|.|.|.|+|+|++..+.....+.-...
T Consensus 9 ~P~i~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~-------------------------- 61 (110)
T 2dm3_A 9 RPHFLQ-APGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVR-------------------------- 61 (110)
T ss_dssp CCEEEE-CCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEEC--------------------------
T ss_pred CCcEEe-CCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEe--------------------------
Confidence 577764 48899999999999999999999999999999988874333222210
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
......|.|.++...|.|.|.|.|.|..|.....
T Consensus 62 -~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 95 (110)
T 2dm3_A 62 -ENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFS 95 (110)
T ss_dssp -TTSCEEEEESSCCGGGCSBBCEEEECSSCEEEEC
T ss_pred -cCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEE
Confidence 1113589999999999999999999999875443
No 448
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=99.21 E-value=4.2e-11 Score=91.59 Aligned_cols=80 Identities=23% Similarity=0.406 Sum_probs=66.3
Q ss_pred CCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCC
Q psy12426 412 RPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGG 490 (616)
Q Consensus 412 ~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G 490 (616)
+|.++.+..++.+++.|+|.+|.. .+.+|.|+|+..+. .......+++...+++|.+|.|++.|.|+|+|.|..|
T Consensus 4 ~P~~l~v~~~t~~Sv~lsW~~p~~----~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~~g 79 (98)
T 3tes_A 4 APKNLVVSEVTEDSLRLSWTAPDA----AFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKGGH 79 (98)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTT----SCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred CCCceEEEecCCCeEEEEecCCcC----ccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeCCc
Confidence 677899999999999999998742 58999999998763 2223345567789999999999999999999999999
Q ss_pred CCCCC
Q psy12426 491 PGEPS 495 (616)
Q Consensus 491 ~g~~s 495 (616)
.|++.
T Consensus 80 ~S~p~ 84 (98)
T 3tes_A 80 RSNPL 84 (98)
T ss_dssp EBCCE
T ss_pred ccCCE
Confidence 88754
No 449
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.21 E-value=3.6e-11 Score=98.22 Aligned_cols=86 Identities=27% Similarity=0.465 Sum_probs=73.7
Q ss_pred CCcceEEEcCCeEEEEEEEeeecCceeEEEECC----------------------------eee-cccCcEEEEecCCce
Q psy12426 222 QLSDIKVRAGSNFEFDINVIGEPIPTKEWLCND----------------------------ITI-ISKDRFKIVNDDKST 272 (616)
Q Consensus 222 ~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~----------------------------~~~-~~~~~~~~~~~~~~~ 272 (616)
.+.++.+..|+.+.|.|.+.|.|.|.+.|++++ ..+ ....++.+...+...
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s 103 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRS 103 (139)
T ss_dssp CCCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEE
T ss_pred CCCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEE
Confidence 357789999999999999999999999999998 444 244567776666677
Q ss_pred EEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy12426 273 KLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 307 (616)
Q Consensus 273 ~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 307 (616)
.|.|.++...|+|.|+|.|.|..|....++.|.|.
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 89999999999999999999999988888887764
No 450
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.21 E-value=1.5e-10 Score=104.27 Aligned_cols=176 Identities=18% Similarity=0.175 Sum_probs=112.2
Q ss_pred cCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccC--cEEEEecCCc--eEEEecCCCCCCcEEEE
Q psy12426 213 KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKD--RFKIVNDDKS--TKLKVFDSKRGDSGIYT 288 (616)
Q Consensus 213 ~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~--~~l~i~~l~~~~~g~y~ 288 (616)
..+|.|. ..+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...+...+.. ..+.|.++...|.|.|+
T Consensus 7 ~~~P~i~-~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 85 (217)
T 2vr9_A 7 YQSPRII-EHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYW 85 (217)
T ss_dssp CCCCEEE-ECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEE
T ss_pred cCCCEEe-cCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEE
Confidence 3566664 44667889999999999999999999999999998876532 2222222221 12368899999999999
Q ss_pred EEEEcCCCCc-eeeEEEEEec-CCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCC-----CE--EE
Q psy12426 289 LAVKNSWGTD-KGTAKVTVLD-IPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETG-----RW--VP 359 (616)
Q Consensus 289 c~a~n~~g~~-~~~~~l~v~~-~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~-----~~--~~ 359 (616)
|.+.|..|.. .....+.+.. +|.....+.......+..+.|.|...... +...+ .|...+.. .. ..
T Consensus 86 C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~---p~~~v--~W~~~g~~~~~~~~~~~~~ 160 (217)
T 2vr9_A 86 CVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGI---PEPTL--IWIKDGVPLDDLKAMSFGA 160 (217)
T ss_dssp EEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEE---SCCEE--EEEETTEEECCCCCC---C
T ss_pred EEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCC---CCCeE--EEEECCcCCCccccccccc
Confidence 9999988765 3355565544 23222222233445677899999752211 11222 22221100 00 00
Q ss_pred cc---ccccceEEeccccCCCeEEEEEEEEecCcCCCC
Q psy12426 360 MG---DVSGTYTRAENLIEGHDYNFRVKAVNKIGESLP 394 (616)
Q Consensus 360 ~~---~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~ 394 (616)
.. ......+.|.++...+.+.|+|.|.|..|....
T Consensus 161 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 198 (217)
T 2vr9_A 161 SSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRES 198 (217)
T ss_dssp CCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEEC
T ss_pred CCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceecc
Confidence 00 012346899999999999999999999987543
No 451
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.21 E-value=5.5e-11 Score=94.05 Aligned_cols=84 Identities=19% Similarity=0.254 Sum_probs=67.1
Q ss_pred EEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-----CceEeEeecCCccEEEcCCCCCCCeEEEEEEEEcCCCCCC
Q psy12426 419 TDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-----PWEKACIVPANITATSVPDLKEGEEYEFRVIAVNKGGPGE 493 (616)
Q Consensus 419 ~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-----~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~~G~g~ 493 (616)
..++.++|.|+|..+ . .++.|.+|.|.|+..+. .|...........+++|.+|+|++.|.|+|+|+|..|.|+
T Consensus 25 ~a~sstsi~vsW~~~-~-~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp 102 (120)
T 1ujt_A 25 VVLTPTTVQVTWTVD-R-QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM 102 (120)
T ss_dssp CCCBTTEEEEEEEES-S-CCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred EEccCceEEEEEccC-C-CCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCCccCC
Confidence 445789999999953 3 34469999999998753 5765544456678999999999999999999999999999
Q ss_pred CCCCCCCEEec
Q psy12426 494 PSKASAPVTCK 504 (616)
Q Consensus 494 ~s~~~~~~~~~ 504 (616)
+|....+.|.+
T Consensus 103 ~S~~v~~~T~e 113 (120)
T 1ujt_A 103 DSESKTVRTTE 113 (120)
T ss_dssp CCCCEEEEECS
T ss_pred CCCCEEEECCC
Confidence 99876555543
No 452
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.20 E-value=2.9e-11 Score=94.41 Aligned_cols=93 Identities=22% Similarity=0.421 Sum_probs=80.6
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.| ...+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+........|.|.++...|.|.|+|.|.|
T Consensus 13 ~~~~i-~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 13 LAARI-LTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp CCCEE-EECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCCEE-EECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 44555 44567889999999999999999999999999999988877888887766678999999999999999999999
Q ss_pred CCCCceeeEEEEEe
Q psy12426 294 SWGTDKGTAKVTVL 307 (616)
Q Consensus 294 ~~g~~~~~~~l~v~ 307 (616)
..|.....+.|.|.
T Consensus 92 ~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 92 SEGKQEAEFTLTIQ 105 (106)
T ss_dssp SSCBCCEEEEEEEC
T ss_pred CCCeEEEEEEEEEE
Confidence 99998888777764
No 453
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.20 E-value=2.6e-11 Score=95.32 Aligned_cols=84 Identities=15% Similarity=0.188 Sum_probs=60.8
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|.. .+.++.+.+|+.+.|.|.+.|.|.|.|.|+|++..+.....+...
T Consensus 10 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~---------------------------- 60 (108)
T 3kvq_A 10 APTITG-NLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK---------------------------- 60 (108)
T ss_dssp -CCCBS-CCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEE----------------------------
T ss_pred CCceec-CCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEe----------------------------
Confidence 577764 488999999999999999999999999999999888754443222
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
.....|.|.++...|.|.|.|.|.|..|.....
T Consensus 61 --~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 93 (108)
T 3kvq_A 61 --DGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVE 93 (108)
T ss_dssp --TTTTEEEECSCCGGGCEEEEEEEC----CEEEE
T ss_pred --CCCcEEEEeecCcccCEEEEEEEEeCCCceEEE
Confidence 124679999999999999999999988865443
No 454
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.20 E-value=1.8e-10 Score=89.86 Aligned_cols=100 Identities=17% Similarity=0.205 Sum_probs=78.2
Q ss_pred cCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEEeccccCCCeEEEEEEEEe
Q psy12426 308 DIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTRAENLIEGHDYNFRVKAVN 387 (616)
Q Consensus 308 ~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n 387 (616)
.+|.+|.+ +.+.....+++.|+|.+|.. ++..|.+|.|+++.... .|..........+.+.+|.+++.|.|+|+|.|
T Consensus 6 ~~P~~P~~-~~~~~~s~~sv~l~W~~p~~-~g~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n 82 (106)
T 1x4x_A 6 SGPDQCKP-PQVTCRSATCAQVNWEVPLS-NGTDVTEYRLEWGGVEG-SMQICYCGPGLSYEIKGLSPATTYYCRVQALS 82 (106)
T ss_dssp CSCCCCCC-CCCEEEETTEEEEECCCCSC-SSSCCCEEEEEEESSTT-SCCEEEEESCSEEEEESCCSSCEEEEEEEEEC
T ss_pred CCcCCCCC-CEEEEcCCCEEEEEEcCCCC-CCCcceEEEEEEEcCCC-ceEEEEeCCcceEEEcCCCCCCEEEEEEEEEc
Confidence 35667776 67888899999999998876 55689999999986542 33333334557899999999999999999999
Q ss_pred cCcCCCCccccCCEEccCCCCCCCCC
Q psy12426 388 KIGESLPLVCQSPITAKDPFGRPDRP 413 (616)
Q Consensus 388 ~~g~~~~~~~s~~~~~~~~~~~p~~p 413 (616)
..|.+.+ +..+.+.+...+|++|
T Consensus 83 ~~G~g~~---S~~v~~~T~~~~P~~~ 105 (106)
T 1x4x_A 83 VVGAGPF---SEVVACVTPPSSGPSS 105 (106)
T ss_dssp SSCCCCB---CCCEEEECCCCCSCCC
T ss_pred CCcCCCC---cCCEEEECCCCCcCCC
Confidence 9999876 5667777777777665
No 455
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.20 E-value=3.8e-11 Score=109.78 Aligned_cols=130 Identities=14% Similarity=0.047 Sum_probs=77.0
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCC-----------CCCCCCCCCEEec-cccCCCceeccCCcceEEEcCCeEEEEE
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGP-----------GEPSDPTAPHIAR-AKKVSPYINRDQLSDIKVRAGSNFEFDI 238 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~-----------~~~s~~~~~~~~~-~~~~~P~~~~~~~~~~~v~~g~~~~l~c 238 (616)
...|.|.+++.+|+|.|.|.+.+..+. ...... ..+.+. ....+|.+....+ ...+..|+.+.|.|
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~-t~l~V~~~~~~~P~v~~~~~-~~~~~~g~~v~l~C 162 (239)
T 3tv3_H 85 LVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRG-TLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGC 162 (239)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCC-EEEEECCCCCBCCEEEEECC-CCCC--TTEEEEEE
T ss_pred EEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCC-cEEeeccCCCcCCEEEEECC-ChhhccCCcEEEEE
Confidence 347999999999999999999875321 001111 123332 2334555532222 22344699999999
Q ss_pred EEeee-cCc-eeEEEECCeeecccCcEEEEecCC----ceEEEecCCCCCCcEEEEEEEEcCCCCceeeEE
Q psy12426 239 NVIGE-PIP-TKEWLCNDITIISKDRFKIVNDDK----STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAK 303 (616)
Q Consensus 239 ~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~ 303 (616)
.+.+. |.+ .+.|.+++..+...........+. .+.|.|......+ |.|+|.+.|..+.......
T Consensus 163 ~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~ 232 (239)
T 3tv3_H 163 LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKR 232 (239)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEE
T ss_pred EEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEE
Confidence 99985 433 588999886432111000111111 1367888888788 9999999997665544443
No 456
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.20 E-value=6.1e-11 Score=93.19 Aligned_cols=97 Identities=20% Similarity=0.355 Sum_probs=69.7
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.+ ...+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+... ...|.|.++...|.|.|+|.|.|
T Consensus 9 ~~P~~-~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~D~G~Y~C~a~n 85 (108)
T 3kvq_A 9 VAPTI-TGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDG--NRNLTIRRVRKEDEGLYTCQACS 85 (108)
T ss_dssp --CCC-BSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETT--TTEEEECSCCGGGCEEEEEEEC-
T ss_pred CCCce-ecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCC--CcEEEEeecCcccCEEEEEEEEe
Confidence 45666 3445778899999999999999999999999999988876666655433 35899999999999999999999
Q ss_pred CCCCceeeEEEEEecCCCCC
Q psy12426 294 SWGTDKGTAKVTVLDIPSPP 313 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~p~~p 313 (616)
..|.....+.+.+..+|..+
T Consensus 86 ~~g~~~~~~~l~V~~~~~~~ 105 (108)
T 3kvq_A 86 VLGCAKVEAFFIIEGAQEKT 105 (108)
T ss_dssp ---CEEEEEEEEEEC-----
T ss_pred CCCceEEEEEEEEeCCCccc
Confidence 99999999999998776544
No 457
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.20 E-value=1.3e-10 Score=91.84 Aligned_cols=84 Identities=19% Similarity=0.290 Sum_probs=70.4
Q ss_pred cCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecC-------CceEEEecCCCCCCcEEEEEEEEcCCCCceeeE
Q psy12426 230 AGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDD-------KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 302 (616)
Q Consensus 230 ~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~ 302 (616)
.+..+.|.|.+.|.|.|.++|++||..+..+.++.+.... ....|.|.++...|+|.|+|.|.|..|....++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 4568889999999999999999999999877665433211 235899999999999999999999999999999
Q ss_pred EEEEecCCCCC
Q psy12426 303 KVTVLDIPSPP 313 (616)
Q Consensus 303 ~l~v~~~p~~p 313 (616)
.+.+...|...
T Consensus 94 ~l~v~~~P~~~ 104 (126)
T 1he7_A 94 MAAFMDNPFEF 104 (126)
T ss_dssp EECCCSCTTSC
T ss_pred EEEEEcCCCCC
Confidence 99888877653
No 458
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.20 E-value=1.4e-10 Score=105.23 Aligned_cols=128 Identities=12% Similarity=-0.036 Sum_probs=75.0
Q ss_pred CeEEeecccCCCeEEEEEEEEeCC--CCCCCCCCCCCEEecccc------CCCceeccCCcceEEEcCCeEEEEEEEeee
Q psy12426 172 PKGKVLDLIEGNQYEFRVLAVNKG--GPGEPSDPTAPHIARAKK------VSPYINRDQLSDIKVRAGSNFEFDINVIGE 243 (616)
Q Consensus 172 ~~l~i~~l~~~~~~~y~c~a~n~~--g~~~~s~~~~~~~~~~~~------~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~ 243 (616)
..|.|.+++.+|.|.|.|.+.+.. ........ ..+.+.... .+|...+..+....+..|+.+.|.|.+.+.
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~-~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~ 157 (230)
T 1ypz_F 79 SILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEG-TKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAF 157 (230)
T ss_dssp EEEEECSCCGGGCSEEEEEECCTTTCCCCEECSC-EEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEE
T ss_pred EEEEECcCChhhCEEEEEEEECCCCCcccccCCC-EEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeee
Confidence 479999999999999999998741 11011111 123332100 123221111222334468889999999987
Q ss_pred -cC-ceeEEEE-CCeeecccCcEE-EEecCC---ceEEEecCCCCCCcEEEEEEEEcCCCCceeeE
Q psy12426 244 -PI-PTKEWLC-NDITIISKDRFK-IVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTA 302 (616)
Q Consensus 244 -p~-~~~~W~~-~~~~~~~~~~~~-~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~ 302 (616)
|. +.+.|++ ++..+....... ...++. .+.|.|..... + +.|+|.+.|..+......
T Consensus 158 ~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~~~~~ 221 (230)
T 1ypz_F 158 FPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKGGADQ 221 (230)
T ss_dssp SSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTTTSCE
T ss_pred cCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCCceeE
Confidence 65 5999999 776554221101 111111 23688877765 4 899999999766543333
No 459
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=1.8e-11 Score=95.11 Aligned_cols=77 Identities=16% Similarity=0.222 Sum_probs=63.8
Q ss_pred CccCCCCCCceEecCCCeEEEEEEEeeecCC-eeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANIIGEPVP-HVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
|.|. .+++++.|.+|++++|.|.+.|.|.| .|.|+|||..|...++|.....
T Consensus 9 ~~~~-~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~-------------------------- 61 (104)
T 2eny_A 9 VGIT-KRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQ-------------------------- 61 (104)
T ss_dssp CCCS-BCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEE--------------------------
T ss_pred CEEE-ecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEc--------------------------
Confidence 4454 56999999999999999999998864 8999999999987777765531
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEc
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVN 107 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n 107 (616)
....+|.|.++...|+|.|.|.|.|
T Consensus 62 --~~~~~L~I~~v~~~D~G~Y~C~a~~ 86 (104)
T 2eny_A 62 --GRKYILVVREAAPSDAGEVVFSVRG 86 (104)
T ss_dssp --TTEEEEEECSCCTTTCSCEEEEETT
T ss_pred --CCEEEEEECCCCHHHCEEEEEEECC
Confidence 1235799999999999999999864
No 460
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.19 E-value=1.4e-10 Score=90.93 Aligned_cols=95 Identities=23% Similarity=0.379 Sum_probs=76.2
Q ss_pred CCCCCCCCCEEEEec--CCeEEEEecCCCC--CCCCcceeEEEEEeeCCC-CceEeEeecCCccEEEcCCCCCCCeEEEE
Q psy12426 408 GRPDRPGQPTVTDWG--KDHVDLEWTPPKK--DGGSPISQYIIEKKPKYG-PWEKACIVPANITATSVPDLKEGEEYEFR 482 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~--~~~v~l~W~~p~~--~~~~~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 482 (616)
..|++|.++.+.... .+++.|+|.+|.. +.+..+..|+|+|+..++ .|..... .....+.|.+|.|++.|.|+
T Consensus 6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~--~~~~~~~l~~L~p~t~Y~~~ 83 (109)
T 1uc6_A 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL--SNGTAHTITDAYAGKEYIIQ 83 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE--SSCSEEEETTCCSSSCEEEE
T ss_pred EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEec--ccCCEEEEeCCCCCCEEEEE
Confidence 578899999988764 5899999998864 223368899999998876 6765433 34679999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCEEecc
Q psy12426 483 VIAVNKGGPGEPSKASAPVTCKP 505 (616)
Q Consensus 483 v~a~n~~G~g~~s~~~~~~~~~~ 505 (616)
|+|.+. |.|.+|..+......+
T Consensus 84 VRa~~~-g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 84 VAAKDN-EIGTWSDWSVAAHATP 105 (109)
T ss_dssp EECCBS-SSCCCCCCCEEEEECC
T ss_pred EEEEeC-CCCCcCcCCCCeeeee
Confidence 999996 8999999888766553
No 461
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.19 E-value=4e-10 Score=103.91 Aligned_cols=127 Identities=10% Similarity=0.011 Sum_probs=77.7
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCCC-CCCCCCCCCEEecc---ccCCCceeccCCcceEEEcCCeEEEEEEEeee-cC
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGGP-GEPSDPTAPHIARA---KKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PI 245 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g~-~~~s~~~~~~~~~~---~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~ 245 (616)
...|.|.+++.+|.|.|.|.+.+..+. ..... ...+.+.. ...+|.+....+....+..|+.+.|.|.+.+. |.
T Consensus 75 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~-~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~ 153 (252)
T 1oga_E 75 SFPLTVTSAQKNPTAFYLCASSSRSSYEQYFGP-GTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD 153 (252)
T ss_dssp BCCEEECSCCSCCCEEEEEEEESSTTSCCEECC-CEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSS
T ss_pred EEEEEECcCChhhCEEEEEEEecCCccceeECC-CEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCC
Confidence 347999999999999999999986211 00011 11233322 12466654333333334468999999999986 65
Q ss_pred -ceeEEEECCeeecccCcEE---EE----ecCC----ceEEEecCCCCC-CcEEEEEEEEcCCCCc
Q psy12426 246 -PTKEWLCNDITIISKDRFK---IV----NDDK----STKLKVFDSKRG-DSGIYTLAVKNSWGTD 298 (616)
Q Consensus 246 -~~~~W~~~~~~~~~~~~~~---~~----~~~~----~~~l~i~~l~~~-~~g~y~c~a~n~~g~~ 298 (616)
+.+.|++++..+....... .. ..+. .+.|.|...... +.+.|+|.+.|.....
T Consensus 154 ~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 219 (252)
T 1oga_E 154 HVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 219 (252)
T ss_dssp CEEEEEEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred CcEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 4999999998875432211 00 0111 124666655443 5778999999965433
No 462
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.19 E-value=2.1e-10 Score=106.05 Aligned_cols=197 Identities=12% Similarity=0.036 Sum_probs=103.4
Q ss_pred ccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeeec-----CceeEEEEC
Q psy12426 179 LIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGEP-----IPTKEWLCN 253 (616)
Q Consensus 179 l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p-----~~~~~W~~~ 253 (616)
++++|.|.|+|.|. |..... . .+.. ..+|.+ ...+..+.+.+|+++.|.|.+.+.+ .+.+.|+++
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~-~--~~~~---~~~~~~-~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 80 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTN-Y--WMNW---LRELVM-TQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQ 80 (254)
T ss_dssp ------------------------------------CCCE-EEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEE
T ss_pred ecCCccEEEEEcCc---hhhhhh-h--hhhe---eeceeE-EeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEe
Confidence 67899999999998 332211 1 1111 123444 3445678899999999999999988 489999974
Q ss_pred C--eee------------cccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc-eeeEEEEEecCCCCCCCCcc
Q psy12426 254 D--ITI------------ISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD-KGTAKVTVLDIPSPPEGPLK 318 (616)
Q Consensus 254 ~--~~~------------~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~-~~~~~l~v~~~p~~p~~~~~ 318 (616)
+ ..+ ....++.+...+....|.|.+++..|.|.|+|.|.|..+.. .....+.+.....+|. +.
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~--v~ 158 (254)
T 2c1o_A 81 RPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPT--VS 158 (254)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCE--EE
T ss_pred CCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCe--eE
Confidence 3 211 11256666656666799999999999999999999876543 2233566654333332 11
Q ss_pred ce-----eecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC---CC-EEEc--c-cc-----ccceEEeccccCCCeEEE
Q psy12426 319 PS-----NITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET---GR-WVPM--G-DV-----SGTYTRAENLIEGHDYNF 381 (616)
Q Consensus 319 ~~-----~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~---~~-~~~~--~-~~-----~~~~~~i~~L~~~~~y~~ 381 (616)
+. ...+..+.|.|...... ... . .+.|...+. .. .... . .. ....+.|......+.+.|
T Consensus 159 ~~~~~~~~~~g~~v~l~C~~~g~~-p~~-~--~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y 234 (254)
T 2c1o_A 159 IFPPSSEQLTSGGASVVCFLNNFY-PKD-I--NVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSY 234 (254)
T ss_dssp EECCCHHHHHTTEEEEEEEEEEEB-SSC-C--EEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEE
T ss_pred eecCChhhccCCcEEEEEEEeccc-CCC-c--EEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeE
Confidence 11 12356888999753211 111 1 122222111 00 0000 0 00 124577877777778899
Q ss_pred EEEEEecCcC
Q psy12426 382 RVKAVNKIGE 391 (616)
Q Consensus 382 ~v~a~n~~g~ 391 (616)
.|.|.|....
T Consensus 235 ~C~a~n~~~~ 244 (254)
T 2c1o_A 235 TCEATHKTST 244 (254)
T ss_dssp EEEEECTTCS
T ss_pred EEEEEcCCCC
Confidence 9999986654
No 463
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.19 E-value=2.3e-10 Score=91.76 Aligned_cols=101 Identities=24% Similarity=0.371 Sum_probs=78.9
Q ss_pred ecCCCCCCCCccce-eecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-CCEEEccccccceEEeccccCCCeEEEEEE
Q psy12426 307 LDIPSPPEGPLKPS-NITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET-GRWVPMGDVSGTYTRAENLIEGHDYNFRVK 384 (616)
Q Consensus 307 ~~~p~~p~~~~~~~-~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~ 384 (616)
...|.+|.+ +.+. ....+.+.|+|.+|..+++..+..|.|+++.... ..|..+.......+.+.+|.+++.|.|+|+
T Consensus 15 ~~~P~~P~~-~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~ 93 (120)
T 2crm_A 15 PDKPGIPVK-PSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLRVY 93 (120)
T ss_dssp CCCCCCCCC-CEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEECSSCSEEEECSCCTTSCEEEEEE
T ss_pred CCCCCCCCC-CEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEeccccEEEECCCCCCCEEEEEEE
Confidence 345667766 3444 6778999999999887777789999999988665 578877666678899999999999999999
Q ss_pred EEecCcCCCCccccCCEEccCCCCCCC
Q psy12426 385 AVNKIGESLPLVCQSPITAKDPFGRPD 411 (616)
Q Consensus 385 a~n~~g~~~~~~~s~~~~~~~~~~~p~ 411 (616)
|.|..|.+.++ ..+.+.+...+|.
T Consensus 94 A~n~~G~s~~S---~~~~~~T~~~~p~ 117 (120)
T 2crm_A 94 CISDGGQSAVS---ESLLVQTPAVSGP 117 (120)
T ss_dssp EEETTEECCCC---CCCCCCCCCCSCC
T ss_pred EEcCCccCCCc---ccEEEEcCCCCCC
Confidence 99999988875 3444554444443
No 464
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.19 E-value=2.5e-11 Score=94.39 Aligned_cols=78 Identities=13% Similarity=0.251 Sum_probs=63.4
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeecc--ceEEEeecCCCCCceeEeeeccCCccceeec
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRP--IWEKCAQTEGDTPKGKVLDLIEGNHPIWEKC 78 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G--~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~ 78 (616)
||..+...++++.+.+|++++|.|.+.| |.|.|+|+|++..+.... +|.....
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~------------------------ 60 (103)
T 1x44_A 6 SGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVE------------------------ 60 (103)
T ss_dssp SSCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEE------------------------
T ss_pred CCceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEc------------------------
Confidence 4554446799999999999999999988 779999999999987655 5554421
Q ss_pred cccCCCCCceEecCcccCCeEEEEEEEEc
Q psy12426 79 AQTEGDTPKGKVLDLIEGNQYEFRVLAVN 107 (616)
Q Consensus 79 ~~~~~~~~~l~i~~l~~~~~~~y~c~a~n 107 (616)
.....|.|.++...|.|.|.|.|.|
T Consensus 61 ----~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 61 ----GKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp ----TTEEEEEEEEECTTTCSEEEEEETT
T ss_pred ----CCEEEEEECCCCcccCEEEEEEECC
Confidence 1235799999999999999999986
No 465
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.19 E-value=3.9e-11 Score=101.09 Aligned_cols=86 Identities=19% Similarity=0.326 Sum_probs=69.8
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||.|. ..+.++.+.+|+.+.|.|.+.|.|.|.|+|+|++..+.....|......
T Consensus 41 ~P~~~-~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~------------------------- 94 (154)
T 1fhg_A 41 KPYFT-KTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDE------------------------- 94 (154)
T ss_dssp EEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECT-------------------------
T ss_pred CCeEE-ccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECC-------------------------
Confidence 45665 3478899999999999999999999999999999988866666544211
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEP 114 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~ 114 (616)
.....|.|.++...|.|.|.|.|.|..|....
T Consensus 95 --~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 126 (154)
T 1fhg_A 95 --EGNCSLTISEVCGDDDAKYTCKAVNSLGEATC 126 (154)
T ss_dssp --TCEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred --CCeEEEEECCCChhcCEEEEEEEEECCCeEEE
Confidence 11358999999999999999999999986543
No 466
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=2.6e-11 Score=94.53 Aligned_cols=79 Identities=10% Similarity=0.134 Sum_probs=64.7
Q ss_pred CCccCCCCCCc---eEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceee
Q psy12426 1 APHIDRRHLGD---IKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEK 77 (616)
Q Consensus 1 ~P~i~~~~~~~---~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~ 77 (616)
||.+... |.+ +.+.+|+.+.|.|.+.|.|.| |+|+|++..+...+.|.....
T Consensus 7 ~P~~~~~-p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~----------------------- 61 (104)
T 2e6p_A 7 GPVHILS-PQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMD----------------------- 61 (104)
T ss_dssp SSCCCCB-CCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEE-----------------------
T ss_pred CCCEEEC-CCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeC-----------------------
Confidence 5677655 555 889999999999999999999 999999999886666654421
Q ss_pred ccccCCCCCceEecCcccCCeEEEEEEEEcCC
Q psy12426 78 CAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKG 109 (616)
Q Consensus 78 ~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~ 109 (616)
.....|.|.++...|.|.|.|.|.|..
T Consensus 62 -----~~~~~L~I~~~~~~D~G~Y~C~a~n~~ 88 (104)
T 2e6p_A 62 -----GRKHRLILPEAKVQDSGEFECRTEGVS 88 (104)
T ss_dssp -----TTEEEEEESSCCTTTCEEEEEECSSCC
T ss_pred -----CCEEEEEECCCChhhCEEEEEEECCce
Confidence 123579999999999999999999863
No 467
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=8.7e-11 Score=91.33 Aligned_cols=95 Identities=23% Similarity=0.308 Sum_probs=80.3
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.+ ...+.+..+..|+.+.|.|.+.+ |.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.|.|
T Consensus 7 ~pp~~-~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 7 GPAAI-IKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCCE-EECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred CCcEE-EecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 34555 44456789999999999999997 88899999999998878888888777778999999999999999999988
Q ss_pred CCCCceeeEEEEEecCCCCCC
Q psy12426 294 SWGTDKGTAKVTVLDIPSPPE 314 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~p~~p~ 314 (616)
....+.|.|..+|.+|.
T Consensus 85 ----~~~~~~l~V~~~p~~~~ 101 (103)
T 2edf_A 85 ----SKSTASLHVEEKASGPS 101 (103)
T ss_dssp ----CEEEEEEEECCCSSSSC
T ss_pred ----CCcEEEEEEeCCCCCCC
Confidence 46678888888877664
No 468
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=4e-11 Score=96.92 Aligned_cols=84 Identities=21% Similarity=0.358 Sum_probs=67.3
Q ss_pred CCCCCCC-CCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeC-----------C-CCceEeEeecCCccEEEcCCCC
Q psy12426 408 GRPDRPG-QPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPK-----------Y-GPWEKACIVPANITATSVPDLK 474 (616)
Q Consensus 408 ~~p~~p~-~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~-----------~-~~~~~~~~~~~~~~~~~l~~L~ 474 (616)
..|++|. ++.+..++.++++|+|.+|..++ +..|.++|+.. . ..|..... .....+++.+|.
T Consensus 14 ~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g---~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~--~~~~~~~v~gL~ 88 (127)
T 2dmk_A 14 TAPNPPSIREELCTASHDTITVHWISDDEFS---ISSYELQYTIFTGQANFISLYNSVDSWMIVPN--IKQNHYTVHGLQ 88 (127)
T ss_dssp SSCCCCEEEEEEEEEETTEEEEEEECSCCSS---EEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE--ECSSEEEEESCC
T ss_pred CCCcCCCCCCEEEeeeCCEEEEEECCCCCCC---ccceEEEEEEecccccccccccCCCCcEEeec--ccCCeEEECCCC
Confidence 6789998 88999999999999999876533 78899998751 1 25765543 346789999999
Q ss_pred CCCeEEEEEEEEcCCCCCCCCCC
Q psy12426 475 EGEEYEFRVIAVNKGGPGEPSKA 497 (616)
Q Consensus 475 p~t~Y~~~v~a~n~~G~g~~s~~ 497 (616)
|++.|.|||+|+|..|.+ +|.+
T Consensus 89 p~t~Y~frV~A~N~~G~~-~S~~ 110 (127)
T 2dmk_A 89 SGTRYIFIVKAINQAGSR-NSEP 110 (127)
T ss_dssp SSCEEEEEEEEEESSCEE-ECCC
T ss_pred CCCEEEEEEEEEeCCCCC-CCcC
Confidence 999999999999999994 4443
No 469
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=1.2e-10 Score=90.30 Aligned_cols=82 Identities=21% Similarity=0.315 Sum_probs=65.7
Q ss_pred CCCCCCCCCEEEEecCCeEEEEecCCCCCCCCcceeEEEEEeeCCC-Cce--EeEeecCCccEEEcCCCCCCCeEEEEEE
Q psy12426 408 GRPDRPGQPTVTDWGKDHVDLEWTPPKKDGGSPISQYIIEKKPKYG-PWE--KACIVPANITATSVPDLKEGEEYEFRVI 484 (616)
Q Consensus 408 ~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~i~~~~~~~-~~~--~~~~~~~~~~~~~l~~L~p~t~Y~~~v~ 484 (616)
.+|.+|.++++..++.+++.|+|.+|.. +.+|.|+|+..+. .|. ....+... .++|.+|.|++.|.|+|+
T Consensus 7 ~~~~~P~~l~~~~~~~~sv~lsW~~p~~-----~~~Y~v~y~~~~~~~~~~~~~~~~~~~--~~~l~~L~p~t~Y~~~V~ 79 (104)
T 2dkm_A 7 GPLPPPRALTLAAVTPRTVHLTWQPSAG-----ATHYLVRCSPASPKGEEEEREVQVGRP--EVLLDGLEPGRDYEVSVQ 79 (104)
T ss_dssp CSCCCCCCCEEEEECSSEEEEECCCCSS-----CSEEEEEEEESSSCCSSCCEEEEESSS--EEEEESCCTTCCEEEEEE
T ss_pred CCCCCCceeEEEecCCCEEEEEEeCCCC-----CCeEEEEEEECCCCCCcceEEEecCCC--EEEECCCCCCCEEEEEEE
Confidence 4678999999999999999999997642 4889999987764 332 22333333 999999999999999999
Q ss_pred EEcCCCCCCCCC
Q psy12426 485 AVNKGGPGEPSK 496 (616)
Q Consensus 485 a~n~~G~g~~s~ 496 (616)
|+|..|.|.++.
T Consensus 80 A~~~~~~s~p~~ 91 (104)
T 2dkm_A 80 SLRGPEGSEARG 91 (104)
T ss_dssp EECSSSBCCCEE
T ss_pred EECCCCCCCCEE
Confidence 999988887553
No 470
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=3.4e-11 Score=96.52 Aligned_cols=107 Identities=25% Similarity=0.466 Sum_probs=88.7
Q ss_pred CCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEcc-ccccceEEeccc
Q psy12426 295 WGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMG-DVSGTYTRAENL 373 (616)
Q Consensus 295 ~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L 373 (616)
.|.....+.+.+...|.+|.+ +.+..+....+.|+|.+|..+++.++.+|.|+++......|..+. ......+.+.+|
T Consensus 3 ~G~~~~~~~v~~~~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~v~~L 81 (120)
T 2yux_A 3 SGSSGASIDIQIIDRPGPPQI-VKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITEL 81 (120)
T ss_dssp CCCCCCCCCCCCCCCCCCCSC-EEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESSCCSSCCEECCC
T ss_pred CCcccEEEEEEeecCCCcCCC-CEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeecCCcCEEEECCC
Confidence 355666677777888999887 778888999999999998877778899999999988777887764 345678999999
Q ss_pred cCCCeEEEEEEEEecCcCCCCccccCCEE
Q psy12426 374 IEGHDYNFRVKAVNKIGESLPLVCQSPIT 402 (616)
Q Consensus 374 ~~~~~y~~~v~a~n~~g~~~~~~~s~~~~ 402 (616)
.+++.|.|+|.|.|..|.+.++..+..+.
T Consensus 82 ~p~t~Y~frV~A~n~~G~s~~S~~s~~~~ 110 (120)
T 2yux_A 82 VIGNEYYFRVFSENMCGLSEDATMTKESA 110 (120)
T ss_dssp CSSEEEEEEECCCSSSCSCSSCEECSSCE
T ss_pred CCCCEEEEEEEEeeCCcCCCCccCcCCce
Confidence 99999999999999999998876554443
No 471
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.18 E-value=2.7e-10 Score=89.77 Aligned_cols=95 Identities=31% Similarity=0.458 Sum_probs=78.0
Q ss_pred cCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccc--cccceEEeccccCCCeEEEEEEE
Q psy12426 308 DIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGD--VSGTYTRAENLIEGHDYNFRVKA 385 (616)
Q Consensus 308 ~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~~~~~y~~~v~a 385 (616)
.+|.+|.+ +.+.....+++.|+|.+|..+++..+.+|.|+++..+...|..+.. .....+.+.+|.+++.|.|+|+|
T Consensus 7 ~~P~~P~~-l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A 85 (111)
T 1x5y_A 7 GPTSAPQH-LTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVG 85 (111)
T ss_dssp SCCCCCEE-EEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEE
T ss_pred CCCcCCCC-CEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEEE
Confidence 35566655 6777888999999999988777777999999999887778988754 35678999999999999999999
Q ss_pred EecCcCCCCccccCCEEc
Q psy12426 386 VNKIGESLPLVCQSPITA 403 (616)
Q Consensus 386 ~n~~g~~~~~~~s~~~~~ 403 (616)
.|..|.+.++..+..+++
T Consensus 86 ~n~~G~s~~S~~~~~v~~ 103 (111)
T 1x5y_A 86 VNIAGRSEPATLLQPVTI 103 (111)
T ss_dssp EETTEECCCCCCSSCBCC
T ss_pred EcCCcCCCCccCCCCEEe
Confidence 999999888765554443
No 472
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.18 E-value=2.6e-10 Score=90.20 Aligned_cols=95 Identities=16% Similarity=0.241 Sum_probs=74.2
Q ss_pred ccCCcceEEEcCCeEEEEEEEeee---cCceeEEEECCeee-c--ccCcEEEEec--C----CceEEEecCCCCCCcEEE
Q psy12426 220 RDQLSDIKVRAGSNFEFDINVIGE---PIPTKEWLCNDITI-I--SKDRFKIVND--D----KSTKLKVFDSKRGDSGIY 287 (616)
Q Consensus 220 ~~~~~~~~v~~g~~~~l~c~~~~~---p~~~~~W~~~~~~~-~--~~~~~~~~~~--~----~~~~l~i~~l~~~~~g~y 287 (616)
...+.++.+.+|+.+.|.|.+.+. |.|.++|+|+.... . ...++.+... . ....|+|.++...|+|.|
T Consensus 11 ~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y 90 (126)
T 2dav_A 11 IEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNY 90 (126)
T ss_dssp CSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEE
T ss_pred EEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEE
Confidence 344577889999999999999876 88999999974221 1 1345554321 1 146899999999999999
Q ss_pred EEEEEcCCCCceeeEEEEEec-CCCCCC
Q psy12426 288 TLAVKNSWGTDKGTAKVTVLD-IPSPPE 314 (616)
Q Consensus 288 ~c~a~n~~g~~~~~~~l~v~~-~p~~p~ 314 (616)
+|.|.|..|.....+.|+|.. ++..|.
T Consensus 91 ~Cevsn~~g~~~~~~~L~V~~~~~~~p~ 118 (126)
T 2dav_A 91 RCEVTYKDKFDSCSFDLEVHESTGTTPN 118 (126)
T ss_dssp EEEEECSSCEEEECCEEEEECCCCSCCC
T ss_pred EEEEEeCCCcEEEEEEEEEEecCCCCCe
Confidence 999999999999999999998 655554
No 473
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=99.18 E-value=5.1e-11 Score=105.43 Aligned_cols=177 Identities=13% Similarity=0.014 Sum_probs=98.1
Q ss_pred CCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEE---ccccccceEEecc--ccCCCeEEEEEEEEe
Q psy12426 313 PEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVP---MGDVSGTYTRAEN--LIEGHDYNFRVKAVN 387 (616)
Q Consensus 313 p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~---~~~~~~~~~~i~~--L~~~~~y~~~v~a~n 387 (616)
|.+ +.+...... ..|.|+++.... .....|.|+|+..+...|.. +.....+.+.|.. +.+...|.+||+|.+
T Consensus 11 P~n-v~~~s~n~~-~iL~W~p~~~~~-~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~A~~ 87 (211)
T 3g9v_A 11 PQR-VQFQSRNFH-NILQWQPGRALT-GNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAAS 87 (211)
T ss_dssp CEE-EEEEEETTE-EEEEEECCCC----CCCEEEEEEEETTCSSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEEEEE
T ss_pred Cce-eEEEEEcCc-eEEEECCCCCCC-CCCeEEEEEEEECCCCceEECccCCCCCCCEECCCCcccccCccEEEEEEEEC
Confidence 454 666555454 459999765432 23678999998876677874 3344556777764 467889999999999
Q ss_pred cCcCCCCccccCCEEccCCCCCCCCCCCCEEEEecCCeEEEEecCCCC----CCCC-------cceeEEEEEeeCCCCce
Q psy12426 388 KIGESLPLVCQSPITAKDPFGRPDRPGQPTVTDWGKDHVDLEWTPPKK----DGGS-------PISQYIIEKKPKYGPWE 456 (616)
Q Consensus 388 ~~g~~~~~~~s~~~~~~~~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~----~~~~-------~i~~Y~i~~~~~~~~~~ 456 (616)
+.+.+.++... .+... ....+++| .+.+.... ++|.|.|.+|.. .++. -...|.|.|.+.++.-.
T Consensus 88 ~~~~S~ws~~~-~f~~~-~~t~i~PP-~v~v~~~~-~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~~~ 163 (211)
T 3g9v_A 88 AGSYSEWSMTP-RFTPW-WETKIDPP-VMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKE 163 (211)
T ss_dssp TTEECCCEECC-CBCHH-HHCBCCCC-EEECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC------C
T ss_pred CCCcCCCEecC-ccccc-ccCccCCC-EEEEEEcC-CEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCccE
Confidence 88877664322 11110 11334555 36665544 599999998865 2332 13669999987664211
Q ss_pred EeEeecCCccEEEcCCCCCCCeEEEEEEEEcC--CCCCCCCCC
Q psy12426 457 KACIVPANITATSVPDLKEGEEYEFRVIAVNK--GGPGEPSKA 497 (616)
Q Consensus 457 ~~~~~~~~~~~~~l~~L~p~t~Y~~~v~a~n~--~G~g~~s~~ 497 (616)
. .........++|.+|.|++.|.|+|+|... ...|++|..
T Consensus 164 ~-~~~~~~~~~~~i~~L~p~t~Ycv~V~a~~~~~~~~s~~S~~ 205 (211)
T 3g9v_A 164 Q-KVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSEE 205 (211)
T ss_dssp E-EEEEESSCCCC----------CEEEEEEETTTTEECCCCCC
T ss_pred E-EEEecCCcEEEEecCCCCCeEEEEEEEEeCCCCCcCCCCCC
Confidence 1 122234678899999999999999999853 234565553
No 474
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.18 E-value=1.8e-10 Score=104.31 Aligned_cols=125 Identities=17% Similarity=0.197 Sum_probs=83.6
Q ss_pred CceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEec-CCCCCCCC-ccceeecCCeEEEEEeCCCCCCCCceEEEEE
Q psy12426 270 KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLD-IPSPPEGP-LKPSNITKSSCNLEWRAPRDDGGTDILHYVV 347 (616)
Q Consensus 270 ~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~-~p~~p~~~-~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v 347 (616)
....+.+.+|.+...|.|++.|.|..|.+..+..+.+.. .+.+|..+ ........+++.|+|.+|..+++ .|.+|.|
T Consensus 44 ~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~~~~~~~~sv~l~W~~P~~~~G-~i~~Y~v 122 (232)
T 4go6_B 44 DYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSG-KIIEYSV 122 (232)
T ss_dssp -----CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEEEEEEETTEEEEEEECCSCCSS-CCCEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCeeeEEecCCCEEEEEEeCCCCCCC-ceeeEEE
Confidence 345789999999999999999999999876555444433 22233222 33445678899999999887765 8999999
Q ss_pred EEEeCCCCC-------------EEEccccccc---------eEEeccccCCCeEEEEEEEEecCcCCCCc
Q psy12426 348 EKMDMETGR-------------WVPMGDVSGT---------YTRAENLIEGHDYNFRVKAVNKIGESLPL 395 (616)
Q Consensus 348 ~~~~~~~~~-------------~~~~~~~~~~---------~~~i~~L~~~~~y~~~v~a~n~~g~~~~~ 395 (616)
+++...... |......... ...+.+|.+++.|.|+|.|.|..|.|+++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S 192 (232)
T 4go6_B 123 YLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPAT 192 (232)
T ss_dssp EEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSEEEEEEEEEECSSCBCCCE
T ss_pred EEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccCCceEEEEEEECCCcCCCCc
Confidence 997644332 2222211111 12345788999999999999999999875
No 475
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.18 E-value=2.1e-10 Score=88.47 Aligned_cols=92 Identities=15% Similarity=0.239 Sum_probs=77.4
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.|.......+.+..|+.+.|.|.+. .|.+.+.|++++..+..+.++.+...+....|.|.++...|.|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 3566644433346888999999999998 7899999999999988788888887777789999999999999999999
Q ss_pred CCCCceeeEEEEEecCC
Q psy12426 294 SWGTDKGTAKVTVLDIP 310 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~p 310 (616)
|....++.|.|..+|
T Consensus 83 --g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 --GDEKCSTELFVRSGP 97 (100)
T ss_dssp --TTEEEEEEEEECCSC
T ss_pred --CCceEEEEEEEecCC
Confidence 677778888888765
No 476
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.17 E-value=4.1e-11 Score=92.70 Aligned_cols=83 Identities=16% Similarity=0.235 Sum_probs=65.1
Q ss_pred CCccCCCC---CCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccc---eEEEeecCCCCCceeEeeeccCCccc
Q psy12426 1 APHIDRRH---LGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPI---WEKCAQTEGDTPKGKVLDLIEGNHPI 74 (616)
Q Consensus 1 ~P~i~~~~---~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~---Y~C~a~n~~~~~~~~v~~~~~~~~p~ 74 (616)
||.+...+ +..+.+.+|+.+.|.|.+.|.|.|.|.|+|+|..+..... +...
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~---------------------- 61 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR---------------------- 61 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEE----------------------
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEe----------------------
Confidence 46665332 4678899999999999999999999999999988864222 1111
Q ss_pred eeeccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCC
Q psy12426 75 WEKCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 113 (616)
Q Consensus 75 w~~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 113 (616)
.....|.|.++...|.|.|.|.|.|..|...
T Consensus 62 --------~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~ 92 (100)
T 3caf_A 62 --------NQHWSLIMESVVPSDKGNYTCVVENEYGSIN 92 (100)
T ss_dssp --------GGGTEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred --------cCeEEEEEccCCcCCCEEEEEEEEeCCCEEE
Confidence 1135799999999999999999999988643
No 477
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.17 E-value=2.1e-10 Score=100.23 Aligned_cols=115 Identities=7% Similarity=-0.062 Sum_probs=65.5
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeee-cC----ce
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PI----PT 247 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~----~~ 247 (616)
.|.|.+++.+|.|.|.|.|.|..|.... ...+.+. .+|......+. ....|+.+ |.|.+.+. |. ++
T Consensus 60 ~L~I~~v~~~d~G~Y~C~a~n~~~~~~~---~~~ltV~---~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lt 130 (210)
T 1gsm_A 60 VLTVRNASLSAAGTRVCVGSCGGRTFQH---TVQLLVY---AFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALS 130 (210)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEE---EEEEEEE---BCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEE
T ss_pred EEEECccCcccCceEEEEEEeCCCceEE---EEEEEEE---ecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcE
Confidence 4666677777777777777765543211 1112222 33433211111 34467778 99999986 63 48
Q ss_pred eEEEECCeeecccCcEE--EEe------cCC------ceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 248 KEWLCNDITIISKDRFK--IVN------DDK------STKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 248 ~~W~~~~~~~~~~~~~~--~~~------~~~------~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
+.|+|++..+....... ... .+. .+.+.+.....++.+.|+|.|.+...
T Consensus 131 i~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 131 FSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp EEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEET
T ss_pred EEEEECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCC
Confidence 99999999985432111 110 011 12444445555566899999998654
No 478
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.17 E-value=2.3e-10 Score=96.37 Aligned_cols=100 Identities=29% Similarity=0.427 Sum_probs=81.5
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEec-CCceEEEecCCCCCCcEEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVND-DKSTKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
.+|.|. ..+..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+... .....|.|.++...|.|.|+|.|.
T Consensus 40 ~~P~~~-~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 118 (154)
T 1fhg_A 40 VKPYFT-KTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAV 118 (154)
T ss_dssp EEEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEE-ccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEE
Confidence 346553 345678899999999999999999999999999999887777777643 345699999999999999999999
Q ss_pred cCCCCceeeEEEEEecCCCCCC
Q psy12426 293 NSWGTDKGTAKVTVLDIPSPPE 314 (616)
Q Consensus 293 n~~g~~~~~~~l~v~~~p~~p~ 314 (616)
|..|.....+.|.|..+|....
T Consensus 119 N~~G~~~~~~~l~V~~~p~~~~ 140 (154)
T 1fhg_A 119 NSLGEATCTAELLVETMGKEGE 140 (154)
T ss_dssp ETTEEEEEEEEEEEECC-----
T ss_pred ECCCeEEEEEEEEEeCcCcCCC
Confidence 9999988889999988775443
No 479
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.17 E-value=2e-10 Score=90.20 Aligned_cols=102 Identities=20% Similarity=0.230 Sum_probs=79.6
Q ss_pred cCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-CCEEEccccccceEEeccccCCCeEEEEEEEE
Q psy12426 308 DIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET-GRWVPMGDVSGTYTRAENLIEGHDYNFRVKAV 386 (616)
Q Consensus 308 ~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 386 (616)
..|.+|.. ..+.....+++.|+|.++...++..+.+|.|+++.... ..|..........+++.+|.+++.|.|+|.|.
T Consensus 6 ~~P~~P~~-p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 84 (109)
T 1x5x_A 6 SGPSMPAS-PVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAY 84 (109)
T ss_dssp CCCCCCCC-CEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEESCSEEEEESCCSSCEEEEEEEEE
T ss_pred CCCcCCCC-CEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEeCCccEEEECCCCCCCEEEEEEEEE
Confidence 45677776 45778889999999998887767689999999987654 35665555556789999999999999999999
Q ss_pred ecCcCCCCccccCCEEccCCCCCCCCC
Q psy12426 387 NKIGESLPLVCQSPITAKDPFGRPDRP 413 (616)
Q Consensus 387 n~~g~~~~~~~s~~~~~~~~~~~p~~p 413 (616)
|..|.+.++ ..+.+.+...+|.+|
T Consensus 85 n~~G~s~~S---~~~~~~T~~~~P~~p 108 (109)
T 1x5x_A 85 NSEGKSNPS---EVVEFTTCPDSGPSS 108 (109)
T ss_dssp CSSCEEEEC---CCEEEECCCCCCCCC
T ss_pred eCCCCcCCc---cCEEeEeCCCCCCCC
Confidence 999987764 455555555666554
No 480
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.17 E-value=1e-09 Score=103.44 Aligned_cols=113 Identities=13% Similarity=0.074 Sum_probs=75.4
Q ss_pred CcEEEEEEEEcCCCCceeeEEEEE--ecCCCCCCCCccceeecC-CeEEEEEeCCCCCC---CCceEEEEEEEEeCCCCC
Q psy12426 283 DSGIYTLAVKNSWGTDKGTAKVTV--LDIPSPPEGPLKPSNITK-SSCNLEWRAPRDDG---GTDILHYVVEKMDMETGR 356 (616)
Q Consensus 283 ~~g~y~c~a~n~~g~~~~~~~l~v--~~~p~~p~~~~~~~~~~~-~~~~l~W~~~~~~~---~~~i~~y~v~~~~~~~~~ 356 (616)
..|.++|.|.|..|.......+.+ ...|.+|.+ +.+..... ..+.|+|.+|.... +.....|.|+|+..+...
T Consensus 184 ~~y~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~-l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~ 262 (306)
T 3d85_D 184 LPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKN-LQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKRE 262 (306)
T ss_dssp SCEEEEEEEEETTEEEEEEEEECHHHHBCCCCCEE-EEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC----
T ss_pred EEEEEEEEEEccCCccccceEEEehhcEecCCCce-EEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCc
Confidence 478899999999886655443333 457888877 77666433 78999999875432 123479999998766555
Q ss_pred EEEccccccceEEeccccCCCeEEEEEEEEecCcCCCCccccC
Q psy12426 357 WVPMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQS 399 (616)
Q Consensus 357 ~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~ 399 (616)
|........+++.+ .++..|.|+|+|.+..|.|.+|++|.
T Consensus 263 ~~~~~~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS~ 302 (306)
T 3d85_D 263 KKDRVFTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWAS 302 (306)
T ss_dssp --CEEEESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred cEEEeeccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCCC
Confidence 54333333445555 35899999999999989888887764
No 481
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=1.1e-10 Score=90.59 Aligned_cols=94 Identities=20% Similarity=0.278 Sum_probs=78.6
Q ss_pred CCceeccCCcceEEEcCCeEEEEEEEeeecC-ceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 215 SPYINRDQLSDIKVRAGSNFEFDINVIGEPI-PTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 215 ~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
+|.| ...+.++.+.+|+++.|.|.+.+.|. +.+.|++++..+..+.++.+...+....|.|.+++.+|+|.|+|.|
T Consensus 8 p~~~-~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a-- 84 (104)
T 2eny_A 8 HVGI-TKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSV-- 84 (104)
T ss_dssp CCCC-SBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEE--
T ss_pred CCEE-EecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEE--
Confidence 3444 45567889999999999999998875 4899999999998888888887777889999999999999999998
Q ss_pred CCCCceeeEEEEEecCCCCC
Q psy12426 294 SWGTDKGTAKVTVLDIPSPP 313 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~p~~p 313 (616)
+....++.|.|..+|..+
T Consensus 85 --~~~~~~a~L~V~~~p~~~ 102 (104)
T 2eny_A 85 --RGLTSKASLIVRERSGPS 102 (104)
T ss_dssp --TTEEEEECEEEECCCSSC
T ss_pred --CCeeEEEEEEEeCCCcCC
Confidence 445678888888877544
No 482
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=1.7e-11 Score=93.98 Aligned_cols=74 Identities=15% Similarity=0.266 Sum_probs=61.9
Q ss_pred CccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeecccc
Q psy12426 2 PHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQT 81 (616)
Q Consensus 2 P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~~ 81 (616)
|.|. ..|.+..+.+|+.+.|.|.+.|.|.|.|+|+|++..+.
T Consensus 11 ~~i~-~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~------------------------------------- 52 (96)
T 2ens_A 11 VQLV-VEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLP------------------------------------- 52 (96)
T ss_dssp CCCE-EESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCS-------------------------------------
T ss_pred CEEE-ECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECc-------------------------------------
Confidence 4554 34778889999999999999999999999999998776
Q ss_pred CCCCCceEecCcccCCeEEEEEEEEcCCCCCC
Q psy12426 82 EGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGE 113 (616)
Q Consensus 82 ~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~ 113 (616)
......|.|.++...|.|.|.|.|.|..|...
T Consensus 53 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~ 84 (96)
T 2ens_A 53 LPPSPVLILPEIGPQDQGTYSCVATHSSHGPQ 84 (96)
T ss_dssp SCCCSEEEEESCCTTTCEEEECEECCSSCCCE
T ss_pred CCCCCEEEECCCCcccCEEEEEEEEeCCCCcE
Confidence 12246899999999999999999999766443
No 483
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.16 E-value=1.3e-10 Score=87.13 Aligned_cols=80 Identities=13% Similarity=0.139 Sum_probs=65.5
Q ss_pred cCCcceE--EEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCc
Q psy12426 221 DQLSDIK--VRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTD 298 (616)
Q Consensus 221 ~~~~~~~--v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~ 298 (616)
.+..+.. +.+|+.+.|.|.+.+ |.+.+.|+|+|..+..+.++.+...+....|.|.++...|+|.|+|.|.| .
T Consensus 9 ~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~ 83 (91)
T 2lvc_A 9 DPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD----E 83 (91)
T ss_dssp BCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS----C
T ss_pred ccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc----e
Confidence 3344443 458999999999865 88899999999999988899888888888999999999999999999855 3
Q ss_pred eeeEEEE
Q psy12426 299 KGTAKVT 305 (616)
Q Consensus 299 ~~~~~l~ 305 (616)
..++.|+
T Consensus 84 ~~~~~lt 90 (91)
T 2lvc_A 84 CAYFTVT 90 (91)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 4444444
No 484
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.16 E-value=4.4e-10 Score=99.56 Aligned_cols=162 Identities=11% Similarity=0.090 Sum_probs=102.1
Q ss_pred ceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy12426 225 DIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 304 (616)
Q Consensus 225 ~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l 304 (616)
.+.+.+|+.+.|.|.+.|.|.+.+.|++...... ..+ ....+....|.|.+++..|.|.|+|.|.|..|.....+.|
T Consensus 10 ~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~-~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 10 RYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL-NGK--VTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp EEEEETTSCEEEEEEEESCSSCEEEEEETTCCCC-SSE--EEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred cEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc-cce--EEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 3455699999999999999999999998432111 111 1223345579999999999999999999998877778888
Q ss_pred EEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCE-EEc-c-------ccccceEEeccccC
Q psy12426 305 TVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRW-VPM-G-------DVSGTYTRAENLIE 375 (616)
Q Consensus 305 ~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~-~~~-~-------~~~~~~~~i~~L~~ 375 (616)
.|..+|..+.-........+..+.|.|...... +.....+.|...+...- ... . ......+.+.....
T Consensus 87 ~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~---p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 163 (202)
T 1vca_A 87 EIYSFPKDPEIHLSGPLEAGKPITVKCSVADVY---PFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIE 163 (202)
T ss_dssp EEEBCCSCCEEEESSCEETTSCEEEEEEEEEEB---SGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGG
T ss_pred EEEeCCCCCEeCCceEEcCCCCEEEEEEECCcC---CCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeec
Confidence 888776544321112345677889999853211 11112233332211000 000 0 01123345666666
Q ss_pred CCeEEEEEEEEecCcCC
Q psy12426 376 GHDYNFRVKAVNKIGES 392 (616)
Q Consensus 376 ~~~y~~~v~a~n~~g~~ 392 (616)
.+...|+|.|.|..|..
T Consensus 164 d~~g~ytC~A~n~~~~~ 180 (202)
T 1vca_A 164 DIGKVLVCRAKLHIDEM 180 (202)
T ss_dssp GTTCEEEEEEEECSCCC
T ss_pred cCCCeEEEEEEccccCC
Confidence 66778999999988764
No 485
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=4e-11 Score=93.76 Aligned_cols=91 Identities=12% Similarity=0.127 Sum_probs=63.1
Q ss_pred ccCCCCCCceEecCCCeEEEEEEEeee---cCCeeeeeeCCe-eeee--ccceEEEeecCCCCCceeEeeeccCCcccee
Q psy12426 3 HIDRRHLGDIKLSAGTTLKFDANIIGE---PVPHVDWRAGGN-PLNL--RPIWEKCAQTEGDTPKGKVLDLIEGNHPIWE 76 (616)
Q Consensus 3 ~i~~~~~~~~~v~~g~~v~l~C~~~g~---P~p~v~W~~~~~-~l~~--~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~ 76 (616)
.++...|+++.|.+|++++|.|.+.|. |.|.|+|||+.. .+.. ...+.-....
T Consensus 13 ~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~--------------------- 71 (118)
T 2edn_A 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESH--------------------- 71 (118)
T ss_dssp SSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEE---------------------
T ss_pred ceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEecccc---------------------
Confidence 345566999999999999999999885 799999999742 1211 1122211100
Q ss_pred eccccCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 77 KCAQTEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 77 ~~~~~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
.+........|.|.++.+.|.|.|+|.|.|..|.....
T Consensus 72 -~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~~g~~s~~ 109 (118)
T 2edn_A 72 -NSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCG 109 (118)
T ss_dssp -CSSSCEEEEEEEESSCCTTTCSCEEEEEECSSCEEEEE
T ss_pred -ccccccceEEEEEeeCChhhCEEEEEEEEEcCCcEEEE
Confidence 00001124689999999999999999999999865433
No 486
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.16 E-value=3.5e-10 Score=99.88 Aligned_cols=178 Identities=7% Similarity=0.015 Sum_probs=106.3
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.|.... . ..+.+|+++.|.|.+.+.|. .+.|+|++..+..... ..........|.|.++...|+|.|+|.|.|
T Consensus 4 ~~P~i~~~p-~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 2d3v_A 4 SKATLWAEP-G-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYS 79 (196)
T ss_dssp CBCEEEEES-C-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeCC-C-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeC
Confidence 346654333 3 37889999999999988766 9999999986643211 111234456899999999999999999999
Q ss_pred CCCCc--eeeEEEEEecCCCCCCCCc--cceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCC--EEE----c-cc
Q psy12426 294 SWGTD--KGTAKVTVLDIPSPPEGPL--KPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGR--WVP----M-GD 362 (616)
Q Consensus 294 ~~g~~--~~~~~l~v~~~p~~p~~~~--~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~--~~~----~-~~ 362 (616)
..|.. +..+.+.+...+..|.-.. ......+..+.|.|..... + ..+ .|...+... ... . ..
T Consensus 80 ~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~----p-~~~--~W~k~g~~~~~~~~~~~~~~~~ 152 (196)
T 2d3v_A 80 PAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLR----F-DRF--ILTEEGDHKLSWTLDSQLTPSG 152 (196)
T ss_dssp TTEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEESSC----C-SEE--EEEEC---CCEEEEECEECTTS
T ss_pred CCCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCCC----C-CEE--EEEccCCcccccccccccccCC
Confidence 77643 4556777766432222000 1123456789999986432 2 222 332222111 100 0 01
Q ss_pred cccceEEeccccCCCeEEEEEEEEecCcCCCCccccCCEE
Q psy12426 363 VSGTYTRAENLIEGHDYNFRVKAVNKIGESLPLVCQSPIT 402 (616)
Q Consensus 363 ~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~~ 402 (616)
.....+.|.++...+.+.|+|.|.|..+....+..+..+.
T Consensus 153 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~ 192 (196)
T 2d3v_A 153 QFQALFPVGPVTPSHRWMLRCYGSRRHILQVWSEPSDLLE 192 (196)
T ss_dssp CEEEEEECCCCBTTBCEEEEEEEEETTEEEEECCCCCCEE
T ss_pred CceeEEEeeecCcccCeeEEEEEEccCCCCccCCCCccEE
Confidence 2236789999999999999999999765433333344443
No 487
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.16 E-value=4.8e-11 Score=92.53 Aligned_cols=78 Identities=8% Similarity=0.210 Sum_probs=62.3
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeec-cceEEEeecCCCCCceeEeeeccCCccceeecc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLR-PIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCA 79 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~-G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~ 79 (616)
||++....+..+.+.+|+++.|.|.+ +.|.|.|+|+|+|..+... ++|.....
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~------------------------- 68 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESI------------------------- 68 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEE-------------------------
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEec-------------------------
Confidence 46676554444899999999999999 7999999999999998865 66655421
Q ss_pred ccCCCCCceEecCcccCCeEEEEEEEEc
Q psy12426 80 QTEGDTPKGKVLDLIEGNQYEFRVLAVN 107 (616)
Q Consensus 80 ~~~~~~~~l~i~~l~~~~~~~y~c~a~n 107 (616)
.....|.|.++...|+|.|.|.|.|
T Consensus 69 ---~~~~~L~I~~v~~~D~G~Y~C~a~~ 93 (104)
T 1pd6_A 69 ---GAKRTLTISQCSLADDAAYQCVVGG 93 (104)
T ss_dssp ---TTEEEEEECSCSSSSCEEEEEEETT
T ss_pred ---CCEEEEEECCCCcccCEEEEEEECC
Confidence 1234899999999999999999943
No 488
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.16 E-value=8.6e-09 Score=90.66 Aligned_cols=75 Identities=15% Similarity=0.262 Sum_probs=51.2
Q ss_pred ceEEEcCCeEEEEEEE--ee-ec-----CceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCC
Q psy12426 225 DIKVRAGSNFEFDINV--IG-EP-----IPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWG 296 (616)
Q Consensus 225 ~~~v~~g~~~~l~c~~--~~-~p-----~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g 296 (616)
...+..+..+.|.+.+ .| .+ ..+++|++++..+... ..+++..+...+.|.|+|.+.|..+
T Consensus 101 s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA-----------q~lT~sS~TateaG~YtV~VTn~~~ 169 (304)
T 3shs_A 101 HFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT-----------QDITIQEFTADKNGVYTVKVWGESE 169 (304)
T ss_dssp EEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS-----------SEEEECSCCGGGCEEEEEEEESSSG
T ss_pred ceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc-----------cccceeeEEecCCeEEEEEEEcCCC
Confidence 3444556677787777 43 33 4699999999765422 2677788888899999999999877
Q ss_pred Cc--eeeEEEEEecCC
Q psy12426 297 TD--KGTAKVTVLDIP 310 (616)
Q Consensus 297 ~~--~~~~~l~v~~~p 310 (616)
.. +.+..+.+..++
T Consensus 170 ~c~~s~~~~i~~~~~~ 185 (304)
T 3shs_A 170 DSAASASTKIMLATMN 185 (304)
T ss_dssp GGCEEEEEEEEECEEE
T ss_pred CcccccceEEEEEccc
Confidence 44 444445554443
No 489
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.16 E-value=1.9e-10 Score=89.08 Aligned_cols=82 Identities=20% Similarity=0.353 Sum_probs=67.9
Q ss_pred cCCeEEEEEEEeeecCceeEEEECCeeecccCcEEE--EecC---CceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEE
Q psy12426 230 AGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKI--VNDD---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKV 304 (616)
Q Consensus 230 ~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~--~~~~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l 304 (616)
.+..+.|.|.+.|.|.|.+.|++++..+..+.+... ...+ ....|.|.++...|.|.|+|.|.|..|....++.|
T Consensus 15 ~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l 94 (103)
T 1wwb_X 15 SDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISA 94 (103)
T ss_dssp CCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred ECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEE
Confidence 567899999999999999999999999877655322 2111 12459999999999999999999999999999999
Q ss_pred EEecCCC
Q psy12426 305 TVLDIPS 311 (616)
Q Consensus 305 ~v~~~p~ 311 (616)
.+...|.
T Consensus 95 ~V~~~P~ 101 (103)
T 1wwb_X 95 HFMGWPG 101 (103)
T ss_dssp CCSCCCC
T ss_pred EECCCCC
Confidence 8887764
No 490
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.16 E-value=2e-10 Score=104.30 Aligned_cols=131 Identities=15% Similarity=0.004 Sum_probs=77.9
Q ss_pred CCeEEeecccCCCeEEEEEEEEeCCC-----CC-CCCCCCCCEEec-cccCCCceeccCCcceEEEcCCeEEEEEEEeee
Q psy12426 171 TPKGKVLDLIEGNQYEFRVLAVNKGG-----PG-EPSDPTAPHIAR-AKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE 243 (616)
Q Consensus 171 ~~~l~i~~l~~~~~~~y~c~a~n~~g-----~~-~~s~~~~~~~~~-~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~ 243 (616)
...|.|.+++.+|+|.|.|.+.+..+ .. ... ....+.+. ....+|.+....+ ...+..|+.+.|.|.+.+.
T Consensus 78 ~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~-~~~~l~V~~~~~~~P~v~~~~~-~~~~~~g~~v~L~C~~~~~ 155 (230)
T 3n9g_H 78 TVYMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWG-QGTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDY 155 (230)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEEC-CCEEEEECSSCCBCCEEEEECC-CCCCCTTCEEEEEEEEEEE
T ss_pred EEEEEECCCChhhCEEEEEEEccCCCCcccccccccC-CCEEEEEEecCCCCCEEEecCC-CccccCCCCEEEEEEEEeE
Confidence 34799999999999999999987541 00 011 11123332 2234455432222 2224589999999999985
Q ss_pred c--CceeEEEECCeeecccCc---EEEEecCC---ceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEE
Q psy12426 244 P--IPTKEWLCNDITIISKDR---FKIVNDDK---STKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTV 306 (616)
Q Consensus 244 p--~~~~~W~~~~~~~~~~~~---~~~~~~~~---~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v 306 (616)
+ .+.+.| ++..+..... .....++. .+.|.|......+ +.|+|.+.+..+.......+.+
T Consensus 156 ~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v 223 (230)
T 3n9g_H 156 FPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 223 (230)
T ss_dssp BSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred ECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccC
Confidence 4 346899 5544321100 01111110 1378899998889 9999999997665554444443
No 491
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=4.9e-10 Score=87.02 Aligned_cols=95 Identities=17% Similarity=0.283 Sum_probs=81.1
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.| ...+.++.+.+|+++.|.|. .+.|.+.+.|++++..+..+.++.+...+....|.|.++...|.|.|+|.
T Consensus 7 ~pp~~-~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2dku_A 7 GANCF-TEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD--- 81 (103)
T ss_dssp CCCCC-SSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE---
T ss_pred CCCEe-EecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE---
Confidence 34555 44567889999999999999 58889999999999998888888888777778999999999999999998
Q ss_pred CCCCceeeEEEEEecCCCCCC
Q psy12426 294 SWGTDKGTAKVTVLDIPSPPE 314 (616)
Q Consensus 294 ~~g~~~~~~~l~v~~~p~~p~ 314 (616)
.|.....+.|.|...|.+|.
T Consensus 82 -~g~~~~~~~l~V~~~p~~p~ 101 (103)
T 2dku_A 82 -IGQAQSRAQLLVQGRRSGPS 101 (103)
T ss_dssp -CSSCBCCEEEEEECSCCCCS
T ss_pred -eCCceEEEEEEEeCccCCCC
Confidence 57777788999998887764
No 492
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.16 E-value=5.7e-10 Score=99.96 Aligned_cols=160 Identities=14% Similarity=0.041 Sum_probs=109.1
Q ss_pred EcCCeEEEEEEEeee-cCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEe
Q psy12426 229 RAGSNFEFDINVIGE-PIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL 307 (616)
Q Consensus 229 ~~g~~~~l~c~~~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~ 307 (616)
-.++.+.|.|.+.+. |.+.+.|++++..+....++.+...+....|.|.++...|.|.|+|.+.|..|.......+.+.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 367788999999885 5889999999999988888888777777789999999999999999999988876666666543
Q ss_pred c--------------------CCCCC-CCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEE--e-CCCCCEEEccc-
Q psy12426 308 D--------------------IPSPP-EGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKM--D-METGRWVPMGD- 362 (616)
Q Consensus 308 ~--------------------~p~~p-~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~--~-~~~~~~~~~~~- 362 (616)
. .|... ..+-......+..+.|.|...... ...+.+... . ...........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p----~p~v~W~~~~~~~~~~~~~~~~~~~ 170 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDP----PPEVSWLKNEKALAQTDHCNLKFEA 170 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSS----CCEEEEEETTEEECCCSSEEEEEET
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCC----CceEEEEECCeECccCCCEEEEEcC
Confidence 1 11100 011123445677899999864322 122222211 0 11111111111
Q ss_pred cccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 363 VSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 363 ~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
.....+.|.++...+.+.|+|.|.|..|..
T Consensus 171 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~ 200 (212)
T 2r15_A 171 GRTAYFTINGVSTADSGKYGLVVKNKYGSE 200 (212)
T ss_dssp TTEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CCEEEEEEcCcchHHCeEEEEEEEcCCCcE
Confidence 234578999999999999999999999864
No 493
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.16 E-value=4e-10 Score=101.09 Aligned_cols=164 Identities=18% Similarity=0.238 Sum_probs=112.7
Q ss_pred cceEEEcCCeEEEEEEEeeec----CceeEEEEC----------------Ceeecc-----cCcEEEEe---cCCceEEE
Q psy12426 224 SDIKVRAGSNFEFDINVIGEP----IPTKEWLCN----------------DITIIS-----KDRFKIVN---DDKSTKLK 275 (616)
Q Consensus 224 ~~~~v~~g~~~~l~c~~~~~p----~~~~~W~~~----------------~~~~~~-----~~~~~~~~---~~~~~~l~ 275 (616)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++. +..+.. ..++.+.. .....+|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 567899999999999999887 469999983 333321 23444322 12346899
Q ss_pred ecCCCCCCcEEEEEEEEcCCCCceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCC
Q psy12426 276 VFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETG 355 (616)
Q Consensus 276 i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~ 355 (616)
|.+++..|.|.|+|.+.|..|.......|.|..+|..+..+.......+..+.|.|.... +.+...+ .|...+..
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~---g~p~~~v--~W~~~~~~ 162 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKE---GSLPLQF--EWQKLSDS 162 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSB---CCSSCEE--EEEECSTT
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCC---CCCCCEE--EEEECCCC
Confidence 999999999999999999988888888899988877655322333456778999998631 1222323 33222111
Q ss_pred CEEEc---cccccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 356 RWVPM---GDVSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 356 ~~~~~---~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
..... .......+.|.++...+.+.|+|.|.|..|..
T Consensus 163 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~ 202 (214)
T 3jz7_A 163 QTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSD 202 (214)
T ss_dssp CCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred CccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcE
Confidence 11110 11234589999999999999999999998865
No 494
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.15 E-value=3.2e-10 Score=98.93 Aligned_cols=169 Identities=10% Similarity=-0.005 Sum_probs=105.4
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCceEEEecCCCCCCcEEEEEEEEc
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVKN 293 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~n 293 (616)
.+|.+... +. ..+.+|+++.|.|.+.+ +.+.+.|++++... . .....|.|.++...|.|.|+|.+.|
T Consensus 7 ~~P~i~~~-p~-~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~-------~---~~~~~L~i~~v~~~D~G~Y~C~a~n 73 (184)
T 2gi7_A 7 PKPSLQAL-PS-SLVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR-------Y---QDQAVLFIPAMKRSLAGRYRCSYQN 73 (184)
T ss_dssp CCCEEEEE-SC-SEEETTCCEEEEEECST-TCSEEEEEETTTCC-------E---ESSSEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeC-CC-ccccCCCcEEEEEeCCC-CCCEEEEEECCccc-------c---CcccEEEECcCChhhCceEEEEEEc
Confidence 45665433 23 37899999999999987 77899999998641 1 1234899999999999999999999
Q ss_pred CCCC--ceeeEEEEEecCCCCCCCCc--cceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEEEccccccceEE
Q psy12426 294 SWGT--DKGTAKVTVLDIPSPPEGPL--KPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWVPMGDVSGTYTR 369 (616)
Q Consensus 294 ~~g~--~~~~~~l~v~~~p~~p~~~~--~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~ 369 (616)
..|. .+..+.+.+...+..|.-.. ......+..+.|.|..... + ..|.+... ................+.
T Consensus 74 ~~g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~----~-~~~~w~k~-g~~~~~~~~~~~~~~~L~ 147 (184)
T 2gi7_A 74 GSLWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYG----F-DQFALYKE-GDPAPYKNPERWYRASFP 147 (184)
T ss_dssp TTEEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSSC----C-CEEEEEEC-CCCTTSCCCCEEEEESSS
T ss_pred CCCccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCCC----C-cEEEEEEC-CCcCcceecCCCceEEEE
Confidence 7763 24456677755332222100 1122357789999985322 2 23333221 111110000112234577
Q ss_pred eccccCCCeEEEEEEEEecCcCCCCccccCCE
Q psy12426 370 AENLIEGHDYNFRVKAVNKIGESLPLVCQSPI 401 (616)
Q Consensus 370 i~~L~~~~~y~~~v~a~n~~g~~~~~~~s~~~ 401 (616)
|.++...+.+.|+|.|.|..+....+..+..+
T Consensus 148 i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~ 179 (184)
T 2gi7_A 148 IITVTAAHSGTYRCYSFSSRDPYLWSAPSDPL 179 (184)
T ss_dssp EEEETTCCSEEEEEEEECTTSTTBCCCCCCCE
T ss_pred EccCCccCCeEEEEEEEeCCCCcccCCCCCcE
Confidence 88889999999999999987654443334443
No 495
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.15 E-value=2.4e-10 Score=91.37 Aligned_cols=101 Identities=24% Similarity=0.251 Sum_probs=80.0
Q ss_pred cCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC-CCEEEccccccceEEeccccCCCeEEEEEEEE
Q psy12426 308 DIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET-GRWVPMGDVSGTYTRAENLIEGHDYNFRVKAV 386 (616)
Q Consensus 308 ~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~-~~~~~~~~~~~~~~~i~~L~~~~~y~~~v~a~ 386 (616)
..|.+|.+ +.+.....+.+.|.|.++. +++..+..|.|+++.... ..|..........+.+.+|.+++.|.|+|.|.
T Consensus 16 ~~P~~P~~-~~~~~~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 93 (118)
T 1x3d_A 16 CEPDIPNP-PRIANRTKNSLTLQWKAPS-DNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSAR 93 (118)
T ss_dssp SCCCCCCC-CEEEEEETTEEEEECCCCC-CCSSCEEEEEEEECTTTSSSCCEEEEEESCSEEEEESCCTTCEEEEECCEE
T ss_pred CCCcCCCC-cEEeccCCCEEEEEECCCC-CCCCcceEEEEEEecCCCCCCeEEeeccCCcEEEeCCCCCCCEEEEEEEEE
Confidence 46677766 6778889999999999876 456789999999987655 57876655556889999999999999999999
Q ss_pred ecCcCCCCccccCCEEccCCCCCCCCC
Q psy12426 387 NKIGESLPLVCQSPITAKDPFGRPDRP 413 (616)
Q Consensus 387 n~~g~~~~~~~s~~~~~~~~~~~p~~p 413 (616)
|..|.+.++ ..+.+.+...+|.+|
T Consensus 94 n~~G~s~~S---~~~~~~T~~~~P~~P 117 (118)
T 1x3d_A 94 NDYGTSGFS---EEVLYYTSGCSGPSS 117 (118)
T ss_dssp ESSCBCCCC---CCEEEECSCCCCCCC
T ss_pred ECCCCCCCc---cCEEEEcCCCCCccC
Confidence 999988874 445555556666655
No 496
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=1.4e-10 Score=92.73 Aligned_cols=95 Identities=24% Similarity=0.395 Sum_probs=79.1
Q ss_pred CCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecc-cCcEEEEecCCceEEEecCCCCCCcEEEEEEEE
Q psy12426 214 VSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIIS-KDRFKIVNDDKSTKLKVFDSKRGDSGIYTLAVK 292 (616)
Q Consensus 214 ~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~l~i~~l~~~~~g~y~c~a~ 292 (616)
.+|.| ...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+...+ .|.|.++...|.|.|+|.|.
T Consensus 7 ~pP~i-~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 7 GPPVI-RQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CSCCC-SBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEE
T ss_pred CCCEE-EcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEE
Confidence 45666 4456778899999999999999999999999999988753 4566655544 89999999999999999999
Q ss_pred cCCCCceeeEEEEEecCCCC
Q psy12426 293 NSWGTDKGTAKVTVLDIPSP 312 (616)
Q Consensus 293 n~~g~~~~~~~l~v~~~p~~ 312 (616)
|..|.....+.|.|...+.+
T Consensus 83 n~~g~~~~~~~l~V~~~~~p 102 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQEFGVP 102 (118)
T ss_dssp CSSCEEEEECCEEEECCSCC
T ss_pred cCCCcEEEEEEEEEEeCCCC
Confidence 99999888888888776543
No 497
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.15 E-value=8.6e-10 Score=98.90 Aligned_cols=167 Identities=7% Similarity=-0.035 Sum_probs=104.6
Q ss_pred cCCCceeccCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeecccCcEEEEecCCce--EEEecCCCCCCcEEEEEE
Q psy12426 213 KVSPYINRDQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITIISKDRFKIVNDDKST--KLKVFDSKRGDSGIYTLA 290 (616)
Q Consensus 213 ~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~l~i~~l~~~~~g~y~c~ 290 (616)
..+|.|.... . ..+.+|++++|.|.+.+ +.+.+.|+|++..+..... ......... .|.|.++...|+|.|+|.
T Consensus 7 ~~~P~i~~~p-~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 82 (218)
T 1uct_A 7 FPMPFISAKS-S-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRLKFWNETDPEFVIDHMDANKAGRYQCQ 82 (218)
T ss_dssp SCCCCEEESS-C-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EECC----CCCEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEecC-C-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccCCCCcceeeEEEEcccccccCEEEEEE
Confidence 3456664433 3 47899999999999987 6789999999876542221 111112234 899999999999999999
Q ss_pred EEcCCCCc--eeeEEEEEecCCCCCC---CCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCE-EEccccc
Q psy12426 291 VKNSWGTD--KGTAKVTVLDIPSPPE---GPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRW-VPMGDVS 364 (616)
Q Consensus 291 a~n~~g~~--~~~~~l~v~~~p~~p~---~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~-~~~~~~~ 364 (616)
+.|..|.. +....+.+...+..|. .+ ......+..++|.|..... +...|.+. ..+.... .......
T Consensus 83 a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~----~~~~~~W~--k~g~~~~~~~~~~~~ 155 (218)
T 1uct_A 83 YRIGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHI----PFDRFSLA--KEGELSLPQHQSGEH 155 (218)
T ss_dssp EEETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSS----CCSEEEEE--ETTCSSCCSEEECSS
T ss_pred EEcCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCC----CCCEEEEE--ECCCcccccccCCCc
Confidence 99976633 3456667765333222 11 1233567889999953221 12233332 2221110 0111234
Q ss_pred cceEEeccccCCCeEEEEEEEEecCc
Q psy12426 365 GTYTRAENLIEGHDYNFRVKAVNKIG 390 (616)
Q Consensus 365 ~~~~~i~~L~~~~~y~~~v~a~n~~g 390 (616)
...+.|.++...+.+.|+|.|.|...
T Consensus 156 ~~~L~I~~v~~~D~G~Y~C~a~n~~~ 181 (218)
T 1uct_A 156 PANFSLGPVDLNVSGIYRCYGWYNRS 181 (218)
T ss_dssp SEEEECCSCCGGGCEEEEEEEECTTS
T ss_pred cCEEEEccCCcccCEEEEEEEEcCCC
Confidence 56799999999999999999998643
No 498
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.15 E-value=2.9e-10 Score=101.60 Aligned_cols=163 Identities=16% Similarity=0.154 Sum_probs=112.5
Q ss_pred cCCcceEEEcCCeEEEEEEEeeecCceeEEEECCeeec------------ccCcEEEEecCCceEEEecCCCCCCcEEEE
Q psy12426 221 DQLSDIKVRAGSNFEFDINVIGEPIPTKEWLCNDITII------------SKDRFKIVNDDKSTKLKVFDSKRGDSGIYT 288 (616)
Q Consensus 221 ~~~~~~~v~~g~~~~l~c~~~~~p~~~~~W~~~~~~~~------------~~~~~~~~~~~~~~~l~i~~l~~~~~g~y~ 288 (616)
..+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+.. ..|.|.++...|.|.|+
T Consensus 9 ~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~~d~G~Y~ 84 (209)
T 1nbq_A 9 SSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTREDTGTYT 84 (209)
T ss_dssp CSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCTTSCSEEE
T ss_pred cCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCHHHCcEEE
Confidence 34566788999999999999999999999999875521 123444332 48999999999999999
Q ss_pred EEEEcCCCC--ceeeEEEEEecCCCCCCCCccceeecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCCCCEE--------
Q psy12426 289 LAVKNSWGT--DKGTAKVTVLDIPSPPEGPLKPSNITKSSCNLEWRAPRDDGGTDILHYVVEKMDMETGRWV-------- 358 (616)
Q Consensus 289 c~a~n~~g~--~~~~~~l~v~~~p~~p~~~~~~~~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~~~~~-------- 358 (616)
|.+.|..|. ......+.+..+|..+..+.......+..+.|.|..... .+... +.|...+...-.
T Consensus 85 C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~---~p~~~--v~W~~~~~~~~~~~~~~~~~ 159 (209)
T 1nbq_A 85 CMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDG---SPPSE--YTWFKDGIVMPTNPKSTRAF 159 (209)
T ss_dssp EEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSC---BSCCE--EEEEETTCCCCSCSSSSSSC
T ss_pred EEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCC---CCCce--eEEEECCeeCCCccccceee
Confidence 999998663 345667777777776655444455667889999985221 12222 333322111000
Q ss_pred ----EccccccceEEeccccCCCeEEEEEEEEecCcCC
Q psy12426 359 ----PMGDVSGTYTRAENLIEGHDYNFRVKAVNKIGES 392 (616)
Q Consensus 359 ----~~~~~~~~~~~i~~L~~~~~y~~~v~a~n~~g~~ 392 (616)
.........+.|.++...+.+.|+|.|.|..|..
T Consensus 160 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 160 SNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp TTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred eccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 0001134578999999988999999999999875
No 499
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.15 E-value=3.9e-11 Score=115.50 Aligned_cols=210 Identities=12% Similarity=0.005 Sum_probs=112.9
Q ss_pred eEEeecccCCCeEEEEEEEEeCCCCCCCCCCCCCEEeccccCCCceeccCCcceEEEcCCeEEEEEEEeee-cCc---ee
Q psy12426 173 KGKVLDLIEGNQYEFRVLAVNKGGPGEPSDPTAPHIARAKKVSPYINRDQLSDIKVRAGSNFEFDINVIGE-PIP---TK 248 (616)
Q Consensus 173 ~l~i~~l~~~~~~~y~c~a~n~~g~~~~s~~~~~~~~~~~~~~P~~~~~~~~~~~v~~g~~~~l~c~~~~~-p~~---~~ 248 (616)
.|.|.....+|.|.|+|.|.|..+..... ..+........|.+....+....+..|+.+.|.|.+.+. |.+ .+
T Consensus 73 ~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~---~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i 149 (323)
T 2wqr_A 73 ELTLSQKHWLSDRTYTCQVTYQGHTFEDS---TKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQL 149 (323)
T ss_dssp EEEEEHHHHHTTCCEEEEEEETTEEEEEE---ECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEE
T ss_pred EEEEcHHHcCCCCcEEEEEEeCCCCccee---eecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEE
Confidence 46777777779999999999976642211 000001112234333333444457789999999999986 455 89
Q ss_pred EEEECC-eeecccCcEEEEec-C---CceEEEecCCCCCCcEEEEEEEEcCCCCceeeEEEEEe-cCCCCCCCCccce--
Q psy12426 249 EWLCND-ITIISKDRFKIVND-D---KSTKLKVFDSKRGDSGIYTLAVKNSWGTDKGTAKVTVL-DIPSPPEGPLKPS-- 320 (616)
Q Consensus 249 ~W~~~~-~~~~~~~~~~~~~~-~---~~~~l~i~~l~~~~~g~y~c~a~n~~g~~~~~~~l~v~-~~p~~p~~~~~~~-- 320 (616)
.|++++ ..+........... + ....|.|.++...|.|.|+|.|.|..+.......+... ....+|. +.+.
T Consensus 150 ~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~--v~~~~~ 227 (323)
T 2wqr_A 150 TWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPE--VYAFAT 227 (323)
T ss_dssp EEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCE--EEEEEC
T ss_pred EEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCE--EEEeCC
Confidence 999975 43322221111111 1 12479999999999999999999976433222222211 0111221 1111
Q ss_pred ---eecCCeEEEEEeCCCCCCCCceEEEEEEEEeCCC----CCEEE-----ccc---cccceEEeccccCCCeEEEEEEE
Q psy12426 321 ---NITKSSCNLEWRAPRDDGGTDILHYVVEKMDMET----GRWVP-----MGD---VSGTYTRAENLIEGHDYNFRVKA 385 (616)
Q Consensus 321 ---~~~~~~~~l~W~~~~~~~~~~i~~y~v~~~~~~~----~~~~~-----~~~---~~~~~~~i~~L~~~~~y~~~v~a 385 (616)
...+..+.|.|...... ...+ .+.|...+. ..... ... .....+.|......+.+.|.|.|
T Consensus 228 ~~~~~~g~~~~l~C~~~g~~-p~~~---~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a 303 (323)
T 2wqr_A 228 PEWPGSRDKRTLACLIQNFM-PEDI---SVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRA 303 (323)
T ss_dssp CCCTTCTTEEEEEEEEEEEB-SSCC---EEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEE
T ss_pred ChHHhcCCcEEEEEEeeeee-CCCc---EEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEE
Confidence 11267888999753211 1111 233332211 00000 000 01234666666655567788999
Q ss_pred EecCcC
Q psy12426 386 VNKIGE 391 (616)
Q Consensus 386 ~n~~g~ 391 (616)
.|..+.
T Consensus 304 ~n~~~~ 309 (323)
T 2wqr_A 304 VHEAAS 309 (323)
T ss_dssp ECTTST
T ss_pred EeCCCC
Confidence 887765
No 500
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.15 E-value=1.8e-10 Score=89.17 Aligned_cols=88 Identities=18% Similarity=0.190 Sum_probs=63.0
Q ss_pred CCccCCCCCCceEecCCCeEEEEEEEeeecCCeeeeeeCCeeeeeccceEEEeecCCCCCceeEeeeccCCccceeeccc
Q psy12426 1 APHIDRRHLGDIKLSAGTTLKFDANIIGEPVPHVDWRAGGNPLNLRPIWEKCAQTEGDTPKGKVLDLIEGNHPIWEKCAQ 80 (616)
Q Consensus 1 ~P~i~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~l~~~G~Y~C~a~n~~~~~~~~v~~~~~~~~p~w~~~~~ 80 (616)
||+|.. ... ...|+.+.|.|.+.|+|.|.|+|+|+|+.|..+..+.-.... ..
T Consensus 4 pP~i~~--~~~--~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~-----------------------~~ 56 (103)
T 1wwb_X 4 APTITF--LES--PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHV-----------------------TN 56 (103)
T ss_dssp CCCCCC--CCC--CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEE-----------------------EC
T ss_pred CCEEEe--ccC--ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEe-----------------------cC
Confidence 677752 222 356889999999999999999999999998854332121100 00
Q ss_pred cCCCCCceEecCcccCCeEEEEEEEEcCCCCCCCC
Q psy12426 81 TEGDTPKGKVLDLIEGNQYEFRVLAVNKGGPGEPS 115 (616)
Q Consensus 81 ~~~~~~~l~i~~l~~~~~~~y~c~a~n~~g~~~~~ 115 (616)
.......|.|.++...|.|.|.|.|.|..|....+
T Consensus 57 ~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~ 91 (103)
T 1wwb_X 57 HTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQ 91 (103)
T ss_dssp SSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEE
Confidence 00112459999999999999999999999976544
Done!