RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12427
(356 letters)
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 468 bits (1205), Expect = e-163
Identities = 200/356 (56%), Positives = 250/356 (70%), Gaps = 8/356 (2%)
Query: 1 MSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKK 60
SW +R+T I GL G QYEFR+ AEN +G+S P + + +K ++
Sbjct: 53 GGSWSPCAKSRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERK--RR 110
Query: 61 RQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGA 120
R YD DE GK +RGK S+YD YVFDI+ +Y PQPV+IK V DHYDI EE+GTGA
Sbjct: 111 RGYDVDEQGKIVRGKGTVS-SNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGA 169
Query: 121 FGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEM 180
FGVVHR ER TGN FAAKF+ H +KE +RKEI M+ L HP L+NLHDAFEDD+EM
Sbjct: 170 FGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM 229
Query: 181 VLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPE 240
V+I+EF+SGGELFE++ KMSE E + M Q + HMHE N +HLD+KPE
Sbjct: 230 VMIYEFMSGGELFEKVADEHNKMSEDEAV-----EYMRQVCKGLCHMHENNYVHLDLKPE 284
Query: 241 NIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVEREPVGFYTDMWAVGV 300
NIM T+ S +K+IDFGL LDP + VK++TGTAEFAAPE+ E +PVG+YTDMW+VGV
Sbjct: 285 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 344
Query: 301 LAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRNKE 356
L+Y+LLSGLSPF GEND ETL+NVK+CDW D+ AF +SE+GKDFIR+LLL +
Sbjct: 345 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPN 400
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 412 bits (1061), Expect = e-144
Identities = 196/298 (65%), Positives = 240/298 (80%), Gaps = 6/298 (2%)
Query: 60 KRQYDFDETGKKIRGKADE-KVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGT 118
+ + G K+RGK D K++DYD++ DI+ KYVPQPV++K SVYD+YDILEE+G+
Sbjct: 2 RGSHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGS 61
Query: 119 GAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDD 178
GAFGVVHRC E+ TG +F AKFI + L+K ++ EI IMNQLHHPKLINLHDAFED
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY 121
Query: 179 EMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVK 238
EMVLI EFLSGGELF+RI A DYKMSEAEVI M Q +KHMHE +I+HLD+K
Sbjct: 122 EMVLILEFLSGGELFDRIAAEDYKMSEAEVI-----NYMRQACEGLKHMHEHSIVHLDIK 176
Query: 239 PENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVEREPVGFYTDMWAV 298
PENIMC+T+ +++VK+IDFGLATKL+P+E+VK++T TAEFAAPEIV+REPVGFYTDMWA+
Sbjct: 177 PENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAI 236
Query: 299 GVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRNKE 356
GVL YVLLSGLSPFAGE+D+ETL+NVK CDWEFDE+AF +VS E KDFI+ LL +
Sbjct: 237 GVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPR 294
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 389 bits (1002), Expect = e-135
Identities = 128/327 (39%), Positives = 187/327 (57%), Gaps = 12/327 (3%)
Query: 37 GRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVP 96
G + + K++ + + + E V + P
Sbjct: 11 GVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPP 70
Query: 97 QP-----VDIKTSSVYDHYDI--LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK 149
P V K +V Y + E +G G FG VH+C E TG AAK I +K
Sbjct: 71 APFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK 130
Query: 150 ELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVI 209
E ++ EI +MNQL H LI L+DAFE +++VL+ E++ GGELF+RI Y ++E + I
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI 190
Query: 210 PVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVV 269
+ M Q ++HMH+ I+HLD+KPENI+C R++ +K+IDFGLA + P E +
Sbjct: 191 -----LFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245
Query: 270 KISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDW 329
K++ GT EF APE+V + V F TDMW+VGV+AY+LLSGLSPF G+ND ETL N+ AC W
Sbjct: 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRNKE 356
+ ++E F+++SEE K+FI +LL++ K
Sbjct: 306 DLEDEEFQDISEEAKEFISKLLIKEKS 332
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 378 bits (973), Expect = e-132
Identities = 98/251 (39%), Positives = 164/251 (65%), Gaps = 6/251 (2%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 165
+Y+ Y I E++G G FG+VHRC E + + AKF+ V ++ L++KEI I+N H
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHR 61
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVK 225
+++LH++FE +E+V+IFEF+SG ++FERI ++++E E++ + A++
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCE-----ALQ 116
Query: 226 HMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVE 285
+H NI H D++PENI+ QTR S+ +K+I+FG A +L P + ++ E+ APE+ +
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 286 REPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKD 345
+ V TDMW++G L YVLLSG++PF E + + ++N+ ++ FDEEAFK +S E D
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 346 FIRRLLLRNKE 356
F+ RLL++ ++
Sbjct: 237 FVDRLLVKERK 247
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 363 bits (933), Expect = e-126
Identities = 111/264 (42%), Positives = 158/264 (59%), Gaps = 14/264 (5%)
Query: 101 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS------HNLEKELIRK 154
K V D YDI EE+G+G F +V +CRE+ TG +AAKFI + +E I +
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 155 EIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLP 214
E+ I+ Q+ H +I LHD +E+ ++VLI E +SGGELF+ + + +SE E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEAT----- 118
Query: 215 ILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTR--NSTNVKMIDFGLATKLDPNEVVKIS 272
+ Q V ++H K I H D+KPENIM + ++K+IDFGLA +++ K
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 273 TGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFD 332
GT EF APEIV EP+G DMW++GV+ Y+LLSG SPF G+ ETL N+ + ++FD
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 333 EEAFKNVSEEGKDFIRRLLLRNKE 356
EE F + SE KDFIR+LL++
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETR 262
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 362 bits (931), Expect = e-125
Identities = 113/264 (42%), Positives = 158/264 (59%), Gaps = 14/264 (5%)
Query: 101 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS------HNLEKELIRK 154
K V D YDI EE+G+G F +V +CRE+ TG +AAKFI + +E I +
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIER 64
Query: 155 EIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLP 214
E+ I+ Q+ HP +I LHD +E+ ++VLI E +SGGELF+ + + +SE E
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEAT----- 118
Query: 215 ILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTR--NSTNVKMIDFGLATKLDPNEVVKIS 272
+ Q V ++H K I H D+KPENIM + ++K+IDFGLA +++ K
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 273 TGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFD 332
GT EF APEIV EP+G DMW++GV+ Y+LLSG SPF G+ ETL N+ A ++FD
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 333 EEAFKNVSEEGKDFIRRLLLRNKE 356
EE F SE KDFIR+LL++
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETR 262
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 358 bits (922), Expect = e-124
Identities = 115/261 (44%), Positives = 164/261 (62%), Gaps = 14/261 (5%)
Query: 104 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP------VSHNLEKELIRKEID 157
S V DHY++ EE+G+G F +V +CR++ TG +AAKFI + +E I +E++
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 158 IMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM 217
I+ ++ HP +I LHD FE+ ++VLI E +SGGELF+ + ++E E IL
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEATQFLKQILD 119
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIMCQTRN--STNVKMIDFGLATKLDPNEVVKISTGT 275
V ++H K I H D+KPENIM +N + +K+IDFG+A K++ K GT
Sbjct: 120 -----GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 174
Query: 276 AEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEA 335
EF APEIV EP+G DMW++GV+ Y+LLSG SPF GE ETL N+ A +++FDEE
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY 234
Query: 336 FKNVSEEGKDFIRRLLLRNKE 356
F N SE KDFIRRLL+++ +
Sbjct: 235 FSNTSELAKDFIRRLLVKDPK 255
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 358 bits (921), Expect = e-124
Identities = 112/264 (42%), Positives = 160/264 (60%), Gaps = 14/264 (5%)
Query: 101 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS------HNLEKELIRK 154
+ +V D+YD EE+G+G F VV +CRE+ TG +AAKFI + +E I +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 155 EIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLP 214
E+ I+ ++ HP +I LH+ +E+ +++LI E ++GGELF+ + ++E E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQ 122
Query: 215 ILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRN--STNVKMIDFGLATKLDPNEVVKIS 272
IL V ++H I H D+KPENIM RN +K+IDFGLA K+D K
Sbjct: 123 ILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 273 TGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFD 332
GT EF APEIV EP+G DMW++GV+ Y+LLSG SPF G+ ETL NV A ++EF+
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 333 EEAFKNVSEEGKDFIRRLLLRNKE 356
+E F N S KDFIRRLL+++ +
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPK 261
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 351 bits (903), Expect = e-121
Identities = 90/261 (34%), Positives = 153/261 (58%), Gaps = 11/261 (4%)
Query: 102 KTSSVYDHYDIL-EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDI 158
+ + Y + +E+G G F VV +C + TG +AAKF+ + I EI +
Sbjct: 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAV 81
Query: 159 MNQL-HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYK-MSEAEVIPVTLPIL 216
+ P++INLH+ +E+ E++LI E+ +GGE+F + +SE +VI L
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVI-----RL 136
Query: 217 MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKLDPNEVVKISTGT 275
+ Q V ++H+ NI+HLD+KP+NI+ + ++K++DFG++ K+ ++ GT
Sbjct: 137 IKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGT 196
Query: 276 AEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEA 335
E+ APEI+ +P+ TDMW +G++AY+LL+ SPF GE++ ET N+ + ++ EE
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET 256
Query: 336 FKNVSEEGKDFIRRLLLRNKE 356
F +VS+ DFI+ LL++N E
Sbjct: 257 FSSVSQLATDFIQSLLVKNPE 277
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 276 bits (707), Expect = 3e-91
Identities = 86/263 (32%), Positives = 136/263 (51%), Gaps = 16/263 (6%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS-----HNLEKELIRKEI 156
D Y++ E IG G F VV RC R+TG FA K + V+ L E +++E
Sbjct: 18 DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREA 77
Query: 157 DIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITA---PDYKMSEAEVIPVTL 213
I + L HP ++ L + + D + ++FEF+ G +L I + SEA
Sbjct: 78 SICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS---- 133
Query: 214 PILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTR-NSTNVKMIDFGLATKL-DPNEVVKI 271
M Q A+++ H+ NIIH DVKP ++ ++ NS VK+ FG+A +L + V
Sbjct: 134 -HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192
Query: 272 STGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEF 331
GT F APE+V+REP G D+W GV+ ++LLSG PF G + + + ++
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKM 251
Query: 332 DEEAFKNVSEEGKDFIRRLLLRN 354
+ + ++SE KD +RR+L+ +
Sbjct: 252 NPRQWSHISESAKDLVRRMLMLD 274
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 270 bits (692), Expect = 9e-90
Identities = 81/264 (30%), Positives = 136/264 (51%), Gaps = 12/264 (4%)
Query: 96 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLE-KELIRK 154
+ ++ D + ++G+GAFG VH ER +G K I + E I
Sbjct: 10 GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA 69
Query: 155 EIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKM---SEAEVIPV 211
EI+++ L HP +I + + FED M ++ E GGEL ERI + + SE V
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA-- 127
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRN-STNVKMIDFGLATKLDPNEVVK 270
LM Q A+ + H ++++H D+KPENI+ Q + + +K+IDFGLA +E
Sbjct: 128 ---ELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHST 184
Query: 271 ISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWE 330
+ GTA + APE+ +R+ V F D+W+ GV+ Y LL+G PF G + E + +
Sbjct: 185 NAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN 243
Query: 331 FDEEAFKNVSEEGKDFIRRLLLRN 354
+ E + ++ + D ++++L ++
Sbjct: 244 YAVE-CRPLTPQAVDLLKQMLTKD 266
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 268 bits (687), Expect = 5e-89
Identities = 82/255 (32%), Positives = 140/255 (54%), Gaps = 9/255 (3%)
Query: 103 TSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIMN 160
++ D+YD+ EE+G GAF VV RC + TG FAAK I + + + +E I
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 161 QLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQT 220
+L HP ++ LHD+ +++ L+F+ ++GGELFE I A ++ SEA+ + Q
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADA-----SHCIQQI 114
Query: 221 SPAVKHMHEKNIIHLDVKPENIMCQTR-NSTNVKMIDFGLATKLDPNEVVKISTGTAEFA 279
++ + H I+H ++KPEN++ ++ VK+ DFGLA +++ +E GT +
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 174
Query: 280 APEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNV 339
+PE+++++P D+WA GV+ Y+LL G PF E+ +KA +++ + V
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 234
Query: 340 SEEGKDFIRRLLLRN 354
+ E K I +L N
Sbjct: 235 TPEAKSLIDSMLTVN 249
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 270 bits (693), Expect = 6e-89
Identities = 82/256 (32%), Positives = 140/256 (54%), Gaps = 9/256 (3%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIM 159
++ D+YD+ EE+G GAF VV RC + TG FAAK I + + + +E I
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 160 NQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQ 219
+L HP ++ LHD+ +++ L+F+ ++GGELFE I A ++ SEA+ + Q
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADAS-----HCIQQ 136
Query: 220 TSPAVKHMHEKNIIHLDVKPENIMCQTR-NSTNVKMIDFGLATKLDPNEVVKISTGTAEF 278
++ + H I+H ++KPEN++ ++ VK+ DFGLA +++ +E GT +
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 196
Query: 279 AAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKN 338
+PE+++++P D+WA GV+ Y+LL G PF E+ +KA +++ +
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 256
Query: 339 VSEEGKDFIRRLLLRN 354
V+ E K I +L N
Sbjct: 257 VTPEAKSLIDSMLTVN 272
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 266 bits (682), Expect = 2e-87
Identities = 77/299 (25%), Positives = 127/299 (42%), Gaps = 46/299 (15%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS-----HNLEKELIRKEI 156
+ Y + IG G++GVV E +T I A K + + + + E I+ E+
Sbjct: 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV 79
Query: 157 DIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPI- 215
+M +LHHP + L++ +ED+ + L+ E GG L +++ + + V
Sbjct: 80 RLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQI 139
Query: 216 ---------------------------------LMTQTSPAVKHMHEKNIIHLDVKPENI 242
+M Q A+ ++H + I H D+KPEN
Sbjct: 140 CPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENF 199
Query: 243 MCQTRNSTNVKMIDFGLATKLDPNEVVKIST-----GTAEFAAPEIVE--REPVGFYTDM 295
+ T S +K++DFGL+ + + GT F APE++ E G D
Sbjct: 200 LFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259
Query: 296 WAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
W+ GVL ++LL G PF G ND +T+ V F+ + +S +D + LL RN
Sbjct: 260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRN 318
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 262 bits (672), Expect = 1e-86
Identities = 80/255 (31%), Positives = 142/255 (55%), Gaps = 8/255 (3%)
Query: 101 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMN 160
++T+++ + +E +G+GAF V ++R TG +FA K I S + EI ++
Sbjct: 2 MQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLK 61
Query: 161 QLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQT 220
++ H ++ L D +E L+ + +SGGELF+RI +E + V +L
Sbjct: 62 KIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV-YTEKDASLVIQQVLS--- 117
Query: 221 SPAVKHMHEKNIIHLDVKPENIMCQTRNS-TNVKMIDFGLATKLDPNEVVKISTGTAEFA 279
AVK++HE I+H D+KPEN++ T + + + DFGL+ K++ N ++ + GT +
Sbjct: 118 --AVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS-KMEQNGIMSTACGTPGYV 174
Query: 280 APEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNV 339
APE++ ++P D W++GV+ Y+LL G PF E + + + +K +EF+ + ++
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI 234
Query: 340 SEEGKDFIRRLLLRN 354
SE KDFI LL ++
Sbjct: 235 SESAKDFICHLLEKD 249
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 259 bits (664), Expect = 1e-85
Identities = 82/257 (31%), Positives = 138/257 (53%), Gaps = 14/257 (5%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQ 161
+ +Y + IG G++G V ++ T AAK IP + + ++EI+IM
Sbjct: 3 TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKS 62
Query: 162 LHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTS 221
L HP +I L++ FED+ ++ L+ E +GGELFER+ E++ +M
Sbjct: 63 LDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDA-----ARIMKDVL 116
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNS-TNVKMIDFGLATKLDPNEVVKISTGTAEFAA 280
AV + H+ N+ H D+KPEN + T + + +K+IDFGLA + P ++++ GT + +
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 281 PEIVEREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFK 337
P+++E Y D W+ GV+ YVLL G PF+ D E + ++ + F E+ +
Sbjct: 177 PQVLEGL----YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWL 232
Query: 338 NVSEEGKDFIRRLLLRN 354
NVS + + IRRLL ++
Sbjct: 233 NVSPQAESLIRRLLTKS 249
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 255 bits (654), Expect = 5e-84
Identities = 83/259 (32%), Positives = 145/259 (55%), Gaps = 16/259 (6%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS--HNLEKELIRKEIDIM 159
+ + Y+I+ +G G+FG V +C++R T +A K I + N + I +E++++
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 160 NQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQ 219
+L HP ++ L + ED ++ E +GGELF+ I SE + ++ Q
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDA-----ARIIKQ 129
Query: 220 TSPAVKHMHEKNIIHLDVKPENIMCQTRN-STNVKMIDFGLATKLDPNEVVKISTGTAEF 278
+ +MH+ NI+H D+KPENI+ +++ ++K+IDFGL+T N +K GTA +
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 279 AAPEIVEREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEA 335
APE++ Y D+W+ GV+ Y+LLSG PF G+N+ + LK V+ + FD
Sbjct: 190 IAPEVLRGT----YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ 245
Query: 336 FKNVSEEGKDFIRRLLLRN 354
++ +S++ KD IR++L +
Sbjct: 246 WRTISDDAKDLIRKMLTFH 264
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 256 bits (657), Expect = 9e-84
Identities = 83/255 (32%), Positives = 142/255 (55%), Gaps = 10/255 (3%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQ 161
++ D +++ E+G GA +V+RC+++ T +A K + + ++K+++R EI ++ +
Sbjct: 47 NRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLR 104
Query: 162 LHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTS 221
L HP +I L + FE E+ L+ E ++GGELF+RI Y SE + IL
Sbjct: 105 LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY-YSERDAADAVKQILE---- 159
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNS-TNVKMIDFGLATKLDPNEVVKISTGTAEFAA 280
AV ++HE I+H D+KPEN++ T +K+ DFGL+ ++ ++K GT + A
Sbjct: 160 -AVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCA 218
Query: 281 PEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGE-NDVETLKNVKACDWEFDEEAFKNV 339
PEI+ G DMW+VG++ Y+LL G PF E D + + C++ F + V
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEV 278
Query: 340 SEEGKDFIRRLLLRN 354
S KD +R+L++ +
Sbjct: 279 SLNAKDLVRKLIVLD 293
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 260 bits (665), Expect = 3e-83
Identities = 87/260 (33%), Positives = 144/260 (55%), Gaps = 11/260 (4%)
Query: 99 VDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP---VSHNLEKELIRKE 155
V T+ D Y +G G+FG V C+++ TG A K I V +KE + +E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 156 IDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPI 215
+ ++ QL HP ++ L++ FED L+ E +GGELF+ I + SE + + +
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQV 135
Query: 216 LMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNS-TNVKMIDFGLATKLDPNEVVKISTG 274
L + +MH+ I+H D+KPEN++ ++++ N+++IDFGL+T + ++ +K G
Sbjct: 136 LS-----GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG 190
Query: 275 TAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEE 334
TA + APE++ D+W+ GV+ Y+LLSG PF G N+ + LK V+ + F+
Sbjct: 191 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELP 249
Query: 335 AFKNVSEEGKDFIRRLLLRN 354
+K VSE KD IR++L
Sbjct: 250 QWKKVSESAKDLIRKMLTYV 269
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 258 bits (662), Expect = 3e-83
Identities = 84/258 (32%), Positives = 137/258 (53%), Gaps = 10/258 (3%)
Query: 101 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDI 158
I + + Y + EE+G GAF VV RC + G +AA I + + + +E I
Sbjct: 4 ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI 63
Query: 159 MNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMT 218
L HP ++ LHD+ ++ LIF+ ++GGELFE I A +Y SEA+ +
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-YSEADAS-----HCIQ 117
Query: 219 QTSPAVKHMHEKNIIHLDVKPENIMCQTR-NSTNVKMIDFGLATKLD-PNEVVKISTGTA 276
Q AV H H+ ++H ++KPEN++ ++ VK+ DFGLA +++ + GT
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 177
Query: 277 EFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAF 336
+ +PE++ ++P G D+WA GV+ Y+LL G PF E+ + +KA ++F +
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 237
Query: 337 KNVSEEGKDFIRRLLLRN 354
V+ E KD I ++L N
Sbjct: 238 DTVTPEAKDLINKMLTIN 255
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 259 bits (663), Expect = 7e-83
Identities = 80/256 (31%), Positives = 142/256 (55%), Gaps = 10/256 (3%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIM 159
K + + Y ++++G+GA+G V CR++ T A K I + + +E+ ++
Sbjct: 31 KKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVL 90
Query: 160 NQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQ 219
L HP ++ L+D FED L+ E GGELF+ I K +E + + +L
Sbjct: 91 KLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH-RMKFNEVDAAVIIKQVLS-- 147
Query: 220 TSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKLDPNEVVKISTGTAEF 278
V ++H+ NI+H D+KPEN++ +++ +K++DFGL+ + + +K GTA +
Sbjct: 148 ---GVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYY 204
Query: 279 AAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKN 338
APE++ + D+W++GV+ ++LL+G PF G+ D E L+ V+ + FD +KN
Sbjct: 205 IAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263
Query: 339 VSEEGKDFIRRLLLRN 354
VSE KD I+++L +
Sbjct: 264 VSEGAKDLIKQMLQFD 279
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 258 bits (660), Expect = 2e-82
Identities = 82/259 (31%), Positives = 144/259 (55%), Gaps = 16/259 (6%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIM 159
+ + Y+I+ +G G+FG V +C++R T +A K I + N + I +E++++
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 160 NQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQ 219
+L HP ++ L + ED ++ E +GGELF+ I SE + + +
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFS-- 132
Query: 220 TSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKLDPNEVVKISTGTAEF 278
+ +MH+ NI+H D+KPENI+ +++ ++K+IDFGL+T N +K GTA +
Sbjct: 133 ---GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 279 AAPEIVEREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEA 335
APE++ Y D+W+ GV+ Y+LLSG PF G+N+ + LK V+ + FD
Sbjct: 190 IAPEVLRGT----YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ 245
Query: 336 FKNVSEEGKDFIRRLLLRN 354
++ +S++ KD IR++L +
Sbjct: 246 WRTISDDAKDLIRKMLTFH 264
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 252 bits (645), Expect = 5e-82
Identities = 75/260 (28%), Positives = 134/260 (51%), Gaps = 17/260 (6%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQ 161
+ D Y++ E+IG G++ V RC + T FA K I S K +EI+I+ +
Sbjct: 16 NSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS----KRDPTEEIEILLR 71
Query: 162 L-HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQT 220
HP +I L D ++D + ++ E + GGEL ++I + SE E ++
Sbjct: 72 YGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-FSEREA-----SAVLFTI 125
Query: 221 SPAVKHMHEKNIIHLDVKPENIMCQTR--NSTNVKMIDFGLATKLDP-NEVVKISTGTAE 277
+ V+++H + ++H D+KP NI+ N ++++ DFG A +L N ++ TA
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN 185
Query: 278 FAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAG---ENDVETLKNVKACDWEFDEE 334
F APE++ER+ D+W++GVL Y +L+G +PFA + E L + + +
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGG 245
Query: 335 AFKNVSEEGKDFIRRLLLRN 354
+ +VS+ KD + ++L +
Sbjct: 246 YWNSVSDTAKDLVSKMLHVD 265
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 250 bits (640), Expect = 7e-82
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 98 PVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLE--------- 148
P T Y++Y+ E +G G VV RC + T +A K I V+
Sbjct: 7 PGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQEL 66
Query: 149 KELIRKEIDIMNQL-HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAE 207
+E KE+DI+ ++ HP +I L D +E + L+F+ + GELF+ +T +SE E
Sbjct: 67 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKE 125
Query: 208 VIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNE 267
+M + +H+ NI+H D+KPENI+ + N+K+ DFG + +LDP E
Sbjct: 126 T-----RKIMRALLEVICALHKLNIVHRDLKPENILLD--DDMNIKLTDFGFSCQLDPGE 178
Query: 268 VVKISTGTAEFAAPEIVEREPVGFYT------DMWAVGVLAYVLLSGLSPFAGENDVETL 321
++ GT + APEI+E + DMW+ GV+ Y LL+G PF + L
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 322 KNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ + + +++F + + S+ KD + R L+
Sbjct: 239 RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 271
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 254 bits (651), Expect = 7e-81
Identities = 87/270 (32%), Positives = 144/270 (53%), Gaps = 21/270 (7%)
Query: 99 VDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP-------------VSH 145
V K + + Y + ++G+GA+G V C+E+ + A K I +
Sbjct: 27 VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86
Query: 146 NLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSE 205
E I EI ++ L HP +I L D FED L+ EF GGELFE+I E
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDE 145
Query: 206 AEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNS-TNVKMIDFGLATKLD 264
+ + IL + ++H+ NI+H D+KPENI+ + +NS N+K++DFGL++
Sbjct: 146 CDAANIMKQILS-----GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 265 PNEVVKISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNV 324
+ ++ GTA + APE+++++ D+W+ GV+ Y+LL G PF G+ND + +K V
Sbjct: 201 KDYKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
Query: 325 KACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ + FD +KN+S+E K+ I+ +L +
Sbjct: 260 EKGKYYFDFNDWKNISDEAKELIKLMLTYD 289
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 244 bits (626), Expect = 2e-79
Identities = 93/267 (34%), Positives = 141/267 (52%), Gaps = 22/267 (8%)
Query: 101 IKTSSVYDHYDIL---EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEID 157
+K S Y HYD+ + +G G+F + +C +K+ FA K I + +KEI
Sbjct: 1 MKDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEIT 57
Query: 158 IMNQL-HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPIL 216
+ HP ++ LH+ F D L+ E L+GGELFERI + SE E +
Sbjct: 58 ALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH-FSETEA-----SYI 111
Query: 217 MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKLDP-NEVVKISTG 274
M + AV HMH+ ++H D+KPEN++ N +K+IDFG A P N+ +K
Sbjct: 112 MRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF 171
Query: 275 TAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGEND-------VETLKNVKAC 327
T +AAPE++ + D+W++GV+ Y +LSG PF + VE +K +K
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 328 DWEFDEEAFKNVSEEGKDFIRRLLLRN 354
D+ F+ EA+KNVS+E KD I+ LL +
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVD 258
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 245 bits (626), Expect = 8e-79
Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 23/332 (6%)
Query: 38 RSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQ 97
R + + F + ++ + + D + + F
Sbjct: 24 REIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDEL 83
Query: 98 PVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVS--------HNLEK 149
P Y YD + IG G VV RC R TG+ FA K + V+ +
Sbjct: 84 PDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVR 143
Query: 150 ELIRKEIDIMNQLH-HPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEV 208
E R+E I+ Q+ HP +I L D++E M L+F+ + GELF+ +T +SE E
Sbjct: 144 EATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKET 202
Query: 209 IPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEV 268
+M AV +H NI+H D+KPENI+ ++ +++ DFG + L+P E
Sbjct: 203 -----RSIMRSLLEAVSFLHANNIVHRDLKPENILLD--DNMQIRLSDFGFSCHLEPGEK 255
Query: 269 VKISTGTAEFAAPEIVEREPVGFYT------DMWAVGVLAYVLLSGLSPFAGENDVETLK 322
++ GT + APEI++ + D+WA GV+ + LL+G PF + L+
Sbjct: 256 LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLR 315
Query: 323 NVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ ++F + + S KD I RLL +
Sbjct: 316 MIMEGQYQFSSPEWDDRSSTVKDLISRLLQVD 347
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 241 bits (617), Expect = 4e-78
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 37/286 (12%)
Query: 100 DIKTSSVYDHYDILEE-IGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDI 158
D + D Y + E+ +G GA V C T +A K I + + +E+++
Sbjct: 4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEM 63
Query: 159 MNQL-HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM 217
+ Q H ++ L + FE++D L+FE + GG + I + +E E V +
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH-FNELEASVVVQDVAS 122
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNS-TNVKMIDFGLATKLDPNEVVKIST--- 273
A+ +H K I H D+KPENI+C+ N + VK+ DF L + + N +
Sbjct: 123 -----ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 274 -----GTAEFAAPEIVEREPVGF--YT---DMWAVGVLAYVLLSGLSPFAGENDVET--- 320
G+AE+ APE+VE Y D+W++GV+ Y+LLSG PF G +
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 321 ------------LKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
++++ +EF ++ + ++S KD I +LL+R+
Sbjct: 238 RGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRD 283
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 241 bits (618), Expect = 5e-78
Identities = 77/275 (28%), Positives = 124/275 (45%), Gaps = 23/275 (8%)
Query: 92 SKYVPQPVDIKTSSVYDHYDILEE-IGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE 150
+ + Q + K +V D Y + ++ +G G G V C R+TG A K + +
Sbjct: 12 LEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY-----DSP 66
Query: 151 LIRKEIDIMNQL-HHPKLINLHDAFEDDDEMV----LIFEFLSGGELFERITA-PDYKMS 204
R+E+D Q P ++ + D +E+ +I E + GGELF RI D +
Sbjct: 67 KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFT 126
Query: 205 EAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRN-STNVKMIDFGLATKL 263
E E +M A++ +H NI H DVKPEN++ ++ +K+ DFG A +
Sbjct: 127 EREA-----AEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181
Query: 264 DPNEVVKISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVET--- 320
N + T + APE++ E DMW++GV+ Y+LL G PF
Sbjct: 182 TQNALQTP-CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 240
Query: 321 -LKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ ++ + F + VSE+ K IR LL +
Sbjct: 241 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTD 275
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 243 bits (621), Expect = 1e-77
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 22/268 (8%)
Query: 99 VDIKTSSVYDHYDIL-EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEID 157
+ IK +++ D Y + + +G G G V + ++T FA K + + R+E++
Sbjct: 52 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-----DCPKARREVE 106
Query: 158 IMNQL-HHPKLINLHDAFED----DDEMVLIFEFLSGGELFERITA-PDYKMSEAEVIPV 211
+ + P ++ + D +E+ ++++ E L GGELF RI D +E E +
Sbjct: 107 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 166
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRN-STNVKMIDFGLATKLDPNEVVK 270
I A++++H NI H DVKPEN++ ++ + +K+ DFG A + + +
Sbjct: 167 MKSIGE-----AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 271 ISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVET----LKNVKA 326
T + APE++ E DMW++GV+ Y+LL G PF + + ++
Sbjct: 222 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 281
Query: 327 CDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+EF + VSEE K IR LL
Sbjct: 282 GQYEFPNPEWSEVSEEVKMLIRNLLKTE 309
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 242 bits (620), Expect = 3e-77
Identities = 75/288 (26%), Positives = 140/288 (48%), Gaps = 21/288 (7%)
Query: 80 VSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAK 139
+S VF ++ + ++ D Y + + +G+GA G V ERKT A +
Sbjct: 108 LSLSRNKVF-VFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIR 166
Query: 140 FIP--------VSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGE 191
I + EI+I+ +L+HP +I + + F+ +D ++ E + GGE
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGE 225
Query: 192 LFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTR-NST 250
LF+++ ++ EA +L+ AV+++HE IIH D+KPEN++ ++
Sbjct: 226 LFDKVVGNK-RLKEATCKLYFYQMLL-----AVQYLHENGIIHRDLKPENVLLSSQEEDC 279
Query: 251 NVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVEREPVGFYT---DMWAVGVLAYVLLS 307
+K+ DFG + L +++ GT + APE++ Y D W++GV+ ++ LS
Sbjct: 280 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339
Query: 308 GLSPFAGENDVETL-KNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
G PF+ +L + + + F E + VSE+ D +++LL+ +
Sbjct: 340 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 387
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 236 bits (603), Expect = 6e-76
Identities = 73/267 (27%), Positives = 133/267 (49%), Gaps = 20/267 (7%)
Query: 101 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP--------VSHNLEKELI 152
+ ++ D Y + + +G+GA G V ERKT A K I +
Sbjct: 3 VYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV 62
Query: 153 RKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVT 212
EI+I+ +L+HP +I + + F+ +D ++ E + GGELF+++ ++ EA
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNK-RLKEATC---- 116
Query: 213 LPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTR-NSTNVKMIDFGLATKLDPNEVVKI 271
+ Q AV+++HE IIH D+KPEN++ ++ +K+ DFG + L +++
Sbjct: 117 -KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 272 STGTAEFAAPEIVEREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETL-KNVKAC 327
GT + APE++ Y D W++GV+ ++ LSG PF+ +L + +
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
Query: 328 DWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ F E + VSE+ D +++LL+ +
Sbjct: 236 KYNFIPEVWAEVSEKALDLVKKLLVVD 262
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 214 bits (548), Expect = 5e-68
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 43/272 (15%)
Query: 95 VPQPVDIKTSSVYDHYDIL-EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIR 153
V + IK +++ D Y + + +G G G V + ++T FA K + + R
Sbjct: 4 VKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-----DCPKAR 58
Query: 154 KEIDIMNQL-HHPKLINLHDAFED----DDEMVLIFEFLSGGELFERITA-PDYKMSEAE 207
+E+++ + P ++ + D +E+ ++++ E L GGELF RI D +E E
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 118
Query: 208 VIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRN-STNVKMIDFGLATKLDPN 266
+ I A++++H NI H DVKPEN++ ++ + +K+ DFG
Sbjct: 119 ASEIMKSIGE-----AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF------- 166
Query: 267 EVVKISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVET----LK 322
A E E DMW++GV+ Y+LL G PF + +
Sbjct: 167 -------------AKE-TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 212
Query: 323 NVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
++ +EF + VSEE K IR LL
Sbjct: 213 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 244
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 212 bits (542), Expect = 8e-67
Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 45/291 (15%)
Query: 104 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDIMNQL 162
S+ + + + +G GA V R R +KTG++FA K L ++ +E +++ +L
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 163 HHPKLINLHDAFEDD--DEMVLIFEFLSGGELFERITAP--DYKMSEAEVIPVTLPILMT 218
+H ++ L E+ VLI EF G L+ + P Y + E+E + I++
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL-----IVLR 119
Query: 219 QTSPAVKHMHEKNIIHLDVKPENIMCQTR--NSTNVKMIDFGLATKLDPNEVVKISTGTA 276
+ H+ E I+H ++KP NIM + K+ DFG A +L+ +E GT
Sbjct: 120 DVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTE 179
Query: 277 EFAAPEIVEREPVGFYT--------DMWAVGVLAYVLLSGLSPF----AGENDVETLKNV 324
E+ P++ ER + D+W++GV Y +G PF + E + +
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239
Query: 325 KAC-----------------DWEFDEEAFKNVS----EEGKDFIRRLLLRN 354
DW D ++S + +L +
Sbjct: 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEAD 290
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 206 bits (526), Expect = 2e-63
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 24/271 (8%)
Query: 104 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDIMNQL 162
S+ + + + +G GA V R R +KTG++FA K L ++ +E +++ +L
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 163 HHPKLINLHDAFEDD--DEMVLIFEFLSGGELFERITAP--DYKMSEAEVIPVTLPILMT 218
+H ++ L E+ VLI EF G L+ + P Y + E+E + I++
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL-----IVLR 119
Query: 219 QTSPAVKHMHEKNIIHLDVKPENIMCQTR--NSTNVKMIDFGLATKLDPNEVVKISTGTA 276
+ H+ E I+H ++KP NIM + K+ DFG A +L+ +E GT
Sbjct: 120 DVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTE 179
Query: 277 EFAAPEIVEREPVGFYT--------DMWAVGVLAYVLLSGLSPF----AGENDVETLKNV 324
E+ P++ ER + D+W++GV Y +G PF + E + +
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239
Query: 325 KACDWEFDEEAFKNVSEEGKDFIRRLLLRNK 355
+ D+ + +
Sbjct: 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCS 270
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 201 bits (512), Expect = 1e-62
Identities = 62/281 (22%), Positives = 114/281 (40%), Gaps = 40/281 (14%)
Query: 104 SSVY-DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQL 162
S Y ++ + +G GAFG V + R +A K I + + I E+ ++ L
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASL 59
Query: 163 HHPKLINLHDAFEDDDEMV-------------LIFEFLSGGELFERITAPDYKMSEAEVI 209
+H ++ + A+ + V + E+ G L++ I + + E
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 210 PVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVV 269
L Q A+ ++H + IIH D+KP NI + NVK+ DFGLA + + +
Sbjct: 120 -----RLFRQILEALSYIHSQGIIHRDLKPMNIFI-DESR-NVKIGDFGLAKNVHRSLDI 172
Query: 270 KIST---------------GTAEFAAPEIVEREPV-GFYTDMWAVGVLAYVLLSGLSPFA 313
GTA + A E+++ DM+++G++ + ++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FST 230
Query: 314 GENDVETLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
G V LK +++ EF + N + K IR L+ +
Sbjct: 231 GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHD 271
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 198 bits (506), Expect = 6e-62
Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 17/252 (6%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKELIRKEIDIMNQLH 163
+ + + +G G+F V+R TG A K I + + + E+ I QL
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN-EVKIHCQLK 69
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPA 223
HP ++ L++ FED + + L+ E GE+ + SE E M Q
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-----HFMHQIITG 124
Query: 224 VKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLD-PNEVVKISTGTAEFAAPE 282
+ ++H I+H D+ N++ N+K+ DFGLAT+L P+E GT + +PE
Sbjct: 125 MLYLHSHGILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
Query: 283 IVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEE 342
I R G +D+W++G + Y LL G PF + TL V D+E +S E
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS----FLSIE 238
Query: 343 GKDFIRRLLLRN 354
KD I +LL RN
Sbjct: 239 AKDLIHQLLRRN 250
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 198 bits (505), Expect = 1e-61
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 18/251 (7%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKELIRKEIDIMNQLH 163
+ ++I +G G FG V+ RE+++ I A K + +E +L R E++I + L
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR-EVEIQSHLR 67
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPA 223
HP ++ L+ F D + LI E+ G ++ + K E +T+ + A
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRT-----ATYITELANA 121
Query: 224 VKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEI 283
+ + H K +IH D+KPEN++ + +K+ DFG + P+ GT ++ PE+
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEM 178
Query: 284 VEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEG 343
+E D+W++GVL Y L G PF ET K + ++ F + V+E
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGA 234
Query: 344 KDFIRRLLLRN 354
+D I RLL N
Sbjct: 235 RDLISRLLKHN 245
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 195 bits (499), Expect = 8e-61
Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 18/251 (7%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKELIRKEIDIMNQLH 163
D +DI +G G FG V+ RE++ I A K + +E + +R+EI+I + L
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRREIEIQSHLR 72
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPA 223
HP ++ +++ F D + L+ EF GEL++ + + E M + + A
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSA-----TFMEELADA 126
Query: 224 VKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEI 283
+ + HE+ +IH D+KPEN++ + +K+ DFG + P+ + GT ++ PE+
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKG--ELKIADFGWS-VHAPSLRRRTMCGTLDYLPPEM 183
Query: 284 VEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEG 343
+E + D+W GVL Y L G+ PF + ET + + D +F +S+
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGS 239
Query: 344 KDFIRRLLLRN 354
KD I +LL +
Sbjct: 240 KDLISKLLRYH 250
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 194 bits (494), Expect = 2e-59
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 18/264 (6%)
Query: 96 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKEL 151
P + Y +G G F + T +FA K +P + + +++
Sbjct: 29 EIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM 88
Query: 152 IRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPV 211
EI I L H ++ H FED+D + ++ E L E ++E E
Sbjct: 89 SM-EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEAR-- 144
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLD-PNEVVK 270
+ Q +++H +IH D+K N+ VK+ DFGLATK++ E K
Sbjct: 145 ---YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKK 199
Query: 271 ISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWE 330
+ GT + APE++ ++ F D+W++G + Y LL G PF ET +K ++
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 259
Query: 331 FDEEAFKNVSEEGKDFIRRLLLRN 354
K+++ I+++L +
Sbjct: 260 IP----KHINPVAASLIQKMLQTD 279
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 200 bits (510), Expect = 8e-59
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 15/251 (5%)
Query: 104 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLE-KELIRKEIDIMNQL 162
+ +++ E +GTG FG V R + TG A K + + +E EI IM +L
Sbjct: 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69
Query: 163 HHPKLINLHDAFED------DDEMVLIFEFLSGGELFERITAPD--YKMSEAEVIPVTLP 214
+HP +++ + + +D +L E+ GG+L + + + + E +
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR----- 124
Query: 215 ILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTR-NSTNVKMIDFGLATKLDPNEVVKIST 273
L++ S A++++HE IIH D+KPENI+ Q K+ID G A +LD E+
Sbjct: 125 TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV 184
Query: 274 GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDE 333
GT ++ APE++E++ D W+ G LA+ ++G PF
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHI 244
Query: 334 EAFKNVSEEGK 344
+ +++ K
Sbjct: 245 VVYDDLTGAVK 255
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 190 bits (486), Expect = 9e-59
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 18/264 (6%)
Query: 96 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKEL 151
P + Y +G G F + T +FA K +P + + +++
Sbjct: 3 EIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM 62
Query: 152 IRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPV 211
EI I L H ++ H FED+D + ++ E L E ++E E
Sbjct: 63 SM-EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEAR-- 118
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLD-PNEVVK 270
+ Q +++H +IH D+K N+ VK+ DFGLATK++ E K
Sbjct: 119 ---YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKK 173
Query: 271 ISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWE 330
+ GT + APE++ ++ F D+W++G + Y LL G PF ET +K ++
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 233
Query: 331 FDEEAFKNVSEEGKDFIRRLLLRN 354
K+++ I+++L +
Sbjct: 234 IP----KHINPVAASLIQKMLQTD 253
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 191 bits (488), Expect = 2e-58
Identities = 61/251 (24%), Positives = 123/251 (49%), Gaps = 14/251 (5%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIMNQLHHP 165
+ Y L++IG G+FG + + G + K I +S + E+E R+E+ ++ + HP
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGGELFERIT-APDYKMSEAEVIPVTLPILMTQTSPAV 224
++ ++FE++ + ++ ++ GG+LF+RI E +++ Q A+
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW-----FVQICLAL 138
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIS-TGTAEFAAPEI 283
KH+H++ I+H D+K +NI V++ DFG+A L+ + + GT + +PEI
Sbjct: 139 KHVHDRKILHRDIKSQNIF--LTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI 196
Query: 284 VEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEG 343
E +P +D+WA+G + Y L + F + + + + + + S +
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY---SYDL 253
Query: 344 KDFIRRLLLRN 354
+ + +L RN
Sbjct: 254 RSLVSQLFKRN 264
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 188 bits (479), Expect = 2e-57
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 17/256 (6%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIR--KEIDIM 159
S + L +G G++G V + R ++ G ++A K K+ R E+
Sbjct: 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSH 110
Query: 160 NQL-HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMT 218
++ HP + L A+E+ + L E G L + A + EA+V +
Sbjct: 111 EKVGQHPCCVRLEQAWEEGGILYLQTEL-CGPSLQQHCEAWGASLPEAQVW-----GYLR 164
Query: 219 QTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF 278
T A+ H+H + ++HLDVKP NI K+ DFGL +L ++ G +
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFL-GPRG-RCKLGDFGLLVELGTAGAGEVQEGDPRY 222
Query: 279 AAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKN 338
APE+++ G D++++G+ + + G + L+ E
Sbjct: 223 MAPELLQ-GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY-----LPPEFTAG 276
Query: 339 VSEEGKDFIRRLLLRN 354
+S E + + +L +
Sbjct: 277 LSSELRSVLVMMLEPD 292
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 184 bits (469), Expect = 2e-56
Identities = 69/264 (26%), Positives = 126/264 (47%), Gaps = 23/264 (8%)
Query: 104 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIMNQ 161
S + Y++L IGTG++G + R + G I K + EK+++ E++++ +
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 162 LHHPKLINLHDAFED--DDEMVLIFEFLSGGELFERITAPDYK---MSEAEVIPVTLPIL 216
L HP ++ +D D + + ++ E+ GG+L IT + + E V+ V
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV----- 116
Query: 217 MTQTSPAVKHMHEKN-----IIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVV-K 270
MTQ + A+K H ++ ++H D+KP N+ + NVK+ DFGLA L+ + K
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNHDTSFAK 174
Query: 271 ISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWE 330
GT + +PE + R +D+W++G L Y L + + PF + E ++ +
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
Query: 331 FDEEAFKNVSEEGKDFIRRLLLRN 354
+ S+E + I R+L
Sbjct: 235 RIPYRY---SDELNEIITRMLNLK 255
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 188 bits (480), Expect = 3e-56
Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 23/257 (8%)
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQL-HHPKLI 168
+ + +G GA G + R A K I +E+ ++ + HP +I
Sbjct: 26 FCPKDVLGHGAEGTI-VYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVI 81
Query: 169 NLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMH 228
+D + E L L E + D+ E I L+ QT+ + H+H
Sbjct: 82 RYFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPI-----TLLQQTTSGLAHLH 135
Query: 229 EKNIIHLDVKPENIMCQTRNST---NVKMIDFGLATKLDPNE----VVKISTGTAEFAAP 281
NI+H D+KP NI+ N+ + DFGL KL GT + AP
Sbjct: 136 SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 282 EIVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVKACDWEFDEEAFK 337
E++ + T D+++ G + Y ++S G PF + + AC + K
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHP-EK 254
Query: 338 NVSEEGKDFIRRLLLRN 354
+ ++ I +++ +
Sbjct: 255 HEDVIARELIEKMIAMD 271
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 181 bits (460), Expect = 1e-54
Identities = 45/266 (16%), Positives = 96/266 (36%), Gaps = 28/266 (10%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLI 168
HY ++++G G F V G+ +A K I ++E ++E D+ +HP ++
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 169 NLHDAFEDDD----EMVLIFEFLSGGELFERITA---PDYKMSEAEVIPVTLPILMTQTS 221
L + E L+ F G L+ I ++E +++ + +
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWL-----LLGIC 144
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPN----------EVVKI 271
++ +H K H D+KP NI+ ++D G + + +
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNILLGDEG--QPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 272 STGTAEFAAPEIVE---REPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACD 328
T + APE+ + TD+W++G + Y ++ G P+ + +
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262
Query: 329 WEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ S + ++ +
Sbjct: 263 -QLSIPQSPRHSSALWQLLNSMMTVD 287
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 180 bits (460), Expect = 1e-54
Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 32/265 (12%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHHP- 165
Y IL++IG+G V + + I+A K++ + + L R EI +N+L
Sbjct: 29 IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 166 -KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAV 224
K+I L+D D + ++ E +L + + E AV
Sbjct: 88 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKK-KKSIDPWERK-----SYWKNMLEAV 140
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST---GTAEFAAP 281
+H+ I+H D+KP N + +K+IDFG+A ++ P+ + GT + P
Sbjct: 141 HTIHQHGIVHSDLKPANFLI---VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197
Query: 282 EIVEREP-----------VGFYTDMWAVGVLAYVLLSGLSPFAG-ENDVETLKNVKACDW 329
E ++ + +D+W++G + Y + G +PF N + L + +
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 257
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRN 354
E + ++ +D ++ L R+
Sbjct: 258 EIEFP--DIPEKDLQDVLKCCLKRD 280
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 180 bits (458), Expect = 2e-54
Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 96 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNL---EKELI 152
+ ++ I ++IG G F V+R G A K + + + +
Sbjct: 20 KALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADC 79
Query: 153 RKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITA---PDYKMSEAEVI 209
KEID++ QL+HP +I + +F +D+E+ ++ E G+L I + E V
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 210 PVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVV 269
+ + A++HMH + ++H D+KP N+ VK+ D GL
Sbjct: 140 KYFVQLCS-----ALEHMHSRRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSSKTTA 192
Query: 270 KIS-TGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGEN-DVETLKNVKAC 327
S GT + +PE + F +D+W++G L Y + + SPF G+ ++ +L K
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK-KIE 251
Query: 328 DWEFDEEAFKNVSEEGKDFIRRLLLRN 354
++ + SEE + + + +
Sbjct: 252 QCDYPPLPSDHYSEELRQLVNMCINPD 278
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 179 bits (455), Expect = 1e-53
Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 32/265 (12%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIMNQLHHP- 165
Y IL++IG+G V + + I+A K++ + N + R EI +N+L
Sbjct: 10 IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 166 -KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAV 224
K+I L+D D + ++ E +L + + E AV
Sbjct: 69 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKK-KKSIDPWERK-----SYWKNMLEAV 121
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST---GTAEFAAP 281
+H+ I+H D+KP N + +K+IDFG+A ++ P+ + GT + P
Sbjct: 122 HTIHQHGIVHSDLKPANFLI---VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
Query: 282 EIVEREP-----------VGFYTDMWAVGVLAYVLLSGLSPFAG-ENDVETLKNVKACDW 329
E ++ + +D+W++G + Y + G +PF N + L + +
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 238
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRN 354
E + ++ +D ++ L R+
Sbjct: 239 EIEFP--DIPEKDLQDVLKCCLKRD 261
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 178 bits (453), Expect = 2e-53
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 15/249 (6%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH--NLEKELIRKEIDIMNQLHHPK 166
+Y +L+ IG G F V R TG A K I + + + +E+ IM L+HP
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
++ L + E + + LI E+ SGGE+F+ + A +M E E Q AV++
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARS-----KFRQIVSAVQY 129
Query: 227 MHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVER 286
H+K I+H D+K EN++ N+K+ DFG + + + G +AAPE+ +
Sbjct: 130 CHQKRIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQG 187
Query: 287 EP-VGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKD 345
+ G D+W++GV+ Y L+SG PF G+N E + V ++ + +S + ++
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG--KYRIPFY--MSTDCEN 243
Query: 346 FIRRLLLRN 354
++R L+ N
Sbjct: 244 LLKRFLVLN 252
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 181 bits (460), Expect = 2e-53
Identities = 61/281 (21%), Positives = 116/281 (41%), Gaps = 36/281 (12%)
Query: 103 TSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQL 162
S+ + + +G G+ G V + G A K + + ++ EI ++ +
Sbjct: 10 EQSLKNLVVSEKILGYGSSGTV-VFQGSFQGRPVAVKRMLIDFC---DIALMEIKLLTES 65
Query: 163 -HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPI-LMTQT 220
HP +I + + D + + E L L + + + + ++ PI L+ Q
Sbjct: 66 DDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 221 SPAVKHMHEKNIIHLDVKPENIMCQTRNST-----------NVKMIDFGLATKLDPNEVV 269
+ V H+H IIH D+KP+NI+ T + + + DFGL KLD +
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 270 KIST-----GTAEFAAPEI----VEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGEN 316
+ GT+ + APE+ + T D++++G + Y +LS G PF +
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 317 DVETLKNVKACDWEFDEEAF---KNVSEEGKDFIRRLLLRN 354
E N+ + DE +++ E D I +++ +
Sbjct: 245 SRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 283
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 178 bits (452), Expect = 4e-53
Identities = 58/286 (20%), Positives = 117/286 (40%), Gaps = 45/286 (15%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI-----------------PVSHNLEKE 150
+ Y I+ + G F + C + +A K +S + +
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88
Query: 151 LIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIP 210
+ E+ I+ + + + + DE+ +I+E++ + + + + +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEY-FFVLDKNYTCF 147
Query: 211 VTLPI---LMTQTSPAVKHMH-EKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPN 266
+ + + ++ + ++H EKNI H DVKP NI+ VK+ DFG + + +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG--RVKLSDFGES-EYMVD 204
Query: 267 EVVKISTGTAEFAAPEIVEREPV--GFYTDMWAVGVLAYVLLSGLSPFAGE-NDVETLKN 323
+ +K S GT EF PE E G D+W++G+ YV+ + PF+ + + VE N
Sbjct: 205 KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264
Query: 324 VKACDWEF---------------DEEAFKNVSEEGKDFIRRLLLRN 354
++ + E+ + +S E DF++ L +N
Sbjct: 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKN 310
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 175 bits (447), Expect = 4e-53
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 38/263 (14%)
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLIN 169
+ +E IG+G FG V + + R G + K + E +E+ + +L H +++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIVH 68
Query: 170 LHDAFEDDDEMV----------------LIFEFLSGGELFERI-TAPDYKMSEAEVIPVT 212
+ ++ D + EF G L + I K+ + +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL--- 125
Query: 213 LPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIS 272
L Q + V ++H K +I+ D+KP NI VK+ DFGL T L + S
Sbjct: 126 --ELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKRTRS 181
Query: 273 TGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSP-FAGENDVETLKNVKACDWEF 331
GT + +PE + + G D++A+G++ LL F L++
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI-----I 236
Query: 332 DEEAFKNVSEEGKDFIRRLLLRN 354
+ ++ K +++LL +
Sbjct: 237 SD----IFDKKEKTLLQKLLSKK 255
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 178 bits (454), Expect = 6e-53
Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 32/265 (12%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHHP- 165
Y IL++IG+G V + + I+A K++ + + L R EI +N+L
Sbjct: 57 IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 166 -KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAV 224
K+I L+D D + ++ E +L + + E AV
Sbjct: 116 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKK-KKSIDPWERK-----SYWKNMLEAV 168
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST---GTAEFAAP 281
+H+ I+H D+KP N + +K+IDFG+A ++ P+ + G + P
Sbjct: 169 HTIHQHGIVHSDLKPANFLI---VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP 225
Query: 282 EIVEREP-----------VGFYTDMWAVGVLAYVLLSGLSPFAG-ENDVETLKNVKACDW 329
E ++ + +D+W++G + Y + G +PF N + L + +
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 285
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRN 354
E + ++ +D ++ L R+
Sbjct: 286 EIEFP--DIPEKDLQDVLKCCLKRD 308
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 174 bits (442), Expect = 6e-51
Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 29/283 (10%)
Query: 84 DQYVFDIYSKYVPQPVDIKTSSV-YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP 142
++ + + S+Y I+ + + Y++++ IG GAFG V R + T ++A K +
Sbjct: 44 NKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS 103
Query: 143 VSHNLEK---ELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELF-----E 194
+++ +E DIM + P ++ L AF+DD + ++ E++ GG+L
Sbjct: 104 KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY 163
Query: 195 RITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKM 254
+ + AEV+ A+ +H IH DVKP+N++ S ++K+
Sbjct: 164 DVPEKWARFYTAEVVL------------ALDAIHSMGFIHRDVKPDNMLLD--KSGHLKL 209
Query: 255 IDFGLATKLDPNEVVKIST--GTAEFAAPEIVEREP-VGFYT---DMWAVGVLAYVLLSG 308
DFG K++ +V+ T GT ++ +PE+++ + G+Y D W+VGV Y +L G
Sbjct: 210 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
Query: 309 LSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKDFIRRLL 351
+PF ++ V T + ++S+E K+ I L
Sbjct: 270 DTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL 312
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 172 bits (439), Expect = 9e-51
Identities = 71/275 (25%), Positives = 125/275 (45%), Gaps = 33/275 (12%)
Query: 95 VPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK---EL 151
+P D +DH++IL IG G+FG V ++ T ++A K++ +E+
Sbjct: 2 MPPVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRN 61
Query: 152 IRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELF------ERITAPDYKMSE 205
+ KE+ IM L HP L+NL +F+D+++M ++ + L GG+L K+
Sbjct: 62 VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI 121
Query: 206 AEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDP 265
E++ A+ ++ + IIH D+KP+NI+ +V + DF +A L
Sbjct: 122 CELV------------MALDYLQNQRIIHRDMKPDNILLDEHG--HVHITDFNIAAMLPR 167
Query: 266 NEVVKISTGTAEFAAPEIVEREPVGFYT---DMWAVGVLAYVLLSGLSPF---AGENDVE 319
+ GT + APE+ Y+ D W++GV AY LL G P+ + + E
Sbjct: 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE 227
Query: 320 TLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ + + S+E +++LL N
Sbjct: 228 IVHTFETTVVTYPS----AWSQEMVSLLKKLLEPN 258
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 173 bits (441), Expect = 9e-51
Identities = 78/289 (26%), Positives = 135/289 (46%), Gaps = 35/289 (12%)
Query: 84 DQYVFDIYSKYVPQPVDIKTSSV-YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP 142
D+YV D P V +K + D ++IL+ IG GAF V + ++TG ++A K +
Sbjct: 36 DKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN 95
Query: 143 VSHNLEK---ELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAP 199
L++ R+E D++ + LH AF+D++ + L+ E+ GG+L ++
Sbjct: 96 KWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF 155
Query: 200 DYKMSE-------AEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNV 252
++ AE++ A+ +H +H D+KP+NI+ ++
Sbjct: 156 GERIPAEMARFYLAEIV------------MAIDSVHRLGYVHRDIKPDNILLD--RCGHI 201
Query: 253 KMIDFGLATKLDPNEVVKIST--GTAEFAAPEIVERE----PVGFYT---DMWAVGVLAY 303
++ DFG KL + V+ GT ++ +PEI++ G Y D WA+GV AY
Sbjct: 202 RLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAY 261
Query: 304 VLLSGLSPFAGENDVETLKNVKACDWEFDEEAF-KNVSEEGKDFIRRLL 351
+ G +PF ++ ET + + V EE +DFI+RLL
Sbjct: 262 EMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL 310
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 172 bits (438), Expect = 3e-50
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 33/292 (11%)
Query: 84 DQYVFDIYSKYVPQPVDIKTSSV-YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP 142
++ + + P +K + + ++IL+ IG GAFG V + + +FA K +
Sbjct: 49 EKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN 108
Query: 143 VSHNLEK---ELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAP 199
L++ R+E D++ + LH AF+DD+ + L+ ++ GG+L ++
Sbjct: 109 KWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF 168
Query: 200 DYKMSE-------AEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNV 252
+ ++ E AE++ A+ +H+ + +H D+KP+NI+ + ++
Sbjct: 169 EDRLPEEMARFYLAEMV------------IAIDSVHQLHYVHRDIKPDNILMD--MNGHI 214
Query: 253 KMIDFGLATKLDPNEVVKIST--GTAEFAAPEIVEREPVGF--YT---DMWAVGVLAYVL 305
++ DFG KL + V+ S GT ++ +PEI++ G Y D W++GV Y +
Sbjct: 215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEM 274
Query: 306 LSGLSPFAGENDVETLKNVKACDWEFDE-EAFKNVSEEGKDFIRRLLLRNKE 356
L G +PF E+ VET + F +VSE KD IRRL+ +
Sbjct: 275 LYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREH 326
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 168 bits (428), Expect = 2e-49
Identities = 51/305 (16%), Positives = 99/305 (32%), Gaps = 39/305 (12%)
Query: 70 KKIRGKADEKVSDY-DQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCR 128
K+ + VS Y + + + + + + S + +G GAF V+
Sbjct: 28 FKLLSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGS--KLVYVHHLLGEGAFAQVYEAT 85
Query: 129 ER-----KTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLI 183
+ K F K ++ E + + ++ + + + A + VL+
Sbjct: 86 QGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV 145
Query: 184 FEFLSGGELFERI----TAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKP 239
E S G L I P+ M + VI + ++ +H+ IIH D+KP
Sbjct: 146 GELYSYGTLLNAINLYKNTPEKVMPQGLVI-----SFAMRMLYMIEQVHDCEIIHGDIKP 200
Query: 240 ENIMCQTR---------NSTNVKMIDFGLA---TKLDPNEVVKISTGTAEFAAPEIVERE 287
+N + S + +ID G + + T+ F E++ +
Sbjct: 201 DNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNK 260
Query: 288 PVGFYTDMWAVGVLAYVLLSGLSPF-AGENDVETLKNVKACDWEFDEEAFKNVSEEGKDF 346
P + D + V Y +L G E + + D +F
Sbjct: 261 PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMW---------NEF 311
Query: 347 IRRLL 351
+L
Sbjct: 312 FHVML 316
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 167 bits (426), Expect = 2e-49
Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 28/269 (10%)
Query: 96 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL---- 151
+ + Y + +G+GAFG V +++ KFI LE
Sbjct: 12 LEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDP 71
Query: 152 ----IRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEF-LSGGELFERITAPDYKMSEA 206
+ EI I++++ H +I + D FE+ L+ E SG +LF I ++ E
Sbjct: 72 KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEP 130
Query: 207 EVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPN 266
+ Q AV ++ K+IIH D+K ENI+ +K+IDFG A L+
Sbjct: 131 LAS-----YIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF--TIKLIDFGSAAYLERG 183
Query: 267 EVVKISTGTAEFAAPEIVEREP-VGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVK 325
++ GT E+ APE++ P G +MW++GV Y L+ +PF L+
Sbjct: 184 KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETV 237
Query: 326 ACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
VS+E + LL
Sbjct: 238 EAAIHPP----YLVSKELMSLVSGLLQPV 262
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 167 bits (424), Expect = 2e-49
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 44/266 (16%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK---------EIDI 158
+ + + +G G+F V RE T +A K LEK I K E D+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI------LEKRHIIKENKVPYVTRERDV 83
Query: 159 MNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELF------ERITAPDYKMSEAEVIPVT 212
M++L HP + L+ F+DD+++ + GEL + AE++
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-- 141
Query: 213 LPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIS 272
A++++H K IIH D+KPENI+ ++++ DFG A K+ E +
Sbjct: 142 ----------ALEYLHGKGIIHRDLKPENILLNEDM--HIQITDFGTA-KVLSPESKQAR 188
Query: 273 T----GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACD 328
GTA++ +PE++ + +D+WA+G + Y L++GL PF N+ + + +
Sbjct: 189 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Query: 329 WEFDEEAFKNVSEEGKDFIRRLLLRN 354
++F + + +D + +LL+ +
Sbjct: 249 YDFP----EKFFPKARDLVEKLLVLD 270
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 168 bits (427), Expect = 3e-49
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 14/262 (5%)
Query: 98 PVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEID 157
P+D+ D YD +++IG+G FGV R++ T + A K+I E +++EI
Sbjct: 10 PLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREII 68
Query: 158 IMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM 217
L HP ++ + + +I E+ SGGEL+ERI + SE E
Sbjct: 69 NHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG-RFSEDEAR-----FFF 122
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAE 277
Q V + H I H D+K EN + + +K+ DFG + + K + GT
Sbjct: 123 QQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPA 182
Query: 278 FAAPEIVEREP-VGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKN----VKACDWEFD 332
+ APE++ R+ G D+W+ GV YV+L G PF + + + + +
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP 242
Query: 333 EEAFKNVSEEGKDFIRRLLLRN 354
++ +S E I R+ + +
Sbjct: 243 DDIR--ISPECCHLISRIFVAD 262
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 164 bits (417), Expect = 1e-48
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL---IRKEIDIMNQLHHP 165
HY + + +G G FG V + TG+ A K + ++ I++EI + HP
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVK 225
+I L+ + ++ E++SGGELF+ I ++ E E L Q AV
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEMEAR-----RLFQQILSAVD 125
Query: 226 HMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVE 285
+ H ++H D+KPEN++ N K+ DFGL+ + E ++ S G+ +AAPE++
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS 183
Query: 286 REP-VGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGK 344
G D+W+ GV+ Y LL G PF E+ K ++ + + ++
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVA 239
Query: 345 DFIRRLLLRN 354
+ +L +
Sbjct: 240 TLLMHMLQVD 249
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 164 bits (416), Expect = 5e-48
Identities = 65/291 (22%), Positives = 111/291 (38%), Gaps = 45/291 (15%)
Query: 92 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL 151
S +V Q V++ + + G F V+ ++ +G +A K + + +
Sbjct: 16 SDFVGQTVELGE----LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRA 71
Query: 152 IRKEIDIMNQL-HHPKLINLHDAF-------EDDDEMVLIFEFLSGGELFERI--TAPDY 201
I +E+ M +L HP ++ A + L+ L G+L E +
Sbjct: 72 IIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG 131
Query: 202 KMSEAEVIPVTLPILMTQTSPAVKHMHEKN--IIHLDVKPENIMCQTRNSTNVKMIDFGL 259
+S V+ + QT AV+HMH + IIH D+K EN++ + +K+ DFG
Sbjct: 132 PLSCDTVLKI-----FYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG--TIKLCDFGS 184
Query: 260 ATKLDPNEVVKIST-------------GTAEFAAPEIVE---REPVGFYTDMWAVGVLAY 303
AT + S T + PEI++ P+G D+WA+G + Y
Sbjct: 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244
Query: 304 VLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+L PF L+ V ++ IR +L N
Sbjct: 245 LLCFRQHPFEDGA---KLRIVNG---KYSIPPHDTQYTVFHSLIRAMLQVN 289
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 163 bits (414), Expect = 7e-48
Identities = 61/263 (23%), Positives = 101/263 (38%), Gaps = 28/263 (10%)
Query: 102 KTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK------ELIRKE 155
+ + Y + +G+G FG V+ A K + + + E
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 96
Query: 156 IDIMNQLHH--PKLINLHDAFEDDDEMVLIFEFLSG-GELFERITAPDYKMSEAEVIPVT 212
+ ++ ++ +I L D FE D VLI E +LF+ IT + E
Sbjct: 97 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR--- 152
Query: 213 LPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIS 272
Q AV+H H ++H D+K ENI+ N +K+IDFG L + V
Sbjct: 153 --SFFWQVLEAVRHCHNCGVLHRDIKDENILIDL-NRGELKLIDFGSGALL-KDTVYTDF 208
Query: 273 TGTAEFAAPEIVEREP-VGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEF 331
GT ++ PE + G +W++G+L Y ++ G PF + ++ +
Sbjct: 209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI--------IRGQV 260
Query: 332 DEEAFKNVSEEGKDFIRRLLLRN 354
VS E + IR L
Sbjct: 261 FFRQR--VSSECQHLIRWCLALR 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 162 bits (413), Expect = 1e-47
Identities = 67/272 (24%), Positives = 107/272 (39%), Gaps = 30/272 (11%)
Query: 95 VPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK 154
P P + Y + +G G FG V A K IP + L +
Sbjct: 18 TPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSD 77
Query: 155 ------EIDIMNQLH----HPKLINLHDAFEDDDEMVLIFEF-LSGGELFERITAPDYKM 203
E+ ++ ++ HP +I L D FE + +L+ E L +LF+ IT +
Sbjct: 78 SVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PL 136
Query: 204 SEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKL 263
E Q A++H H + ++H D+K ENI+ R K+IDFG L
Sbjct: 137 GEGPSR-----CFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG-CAKLIDFGSGA-L 189
Query: 264 DPNEVVKISTGTAEFAAPEIVEREP-VGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLK 322
+E GT ++ PE + R +W++G+L Y ++ G PF + ++
Sbjct: 190 LHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI---- 245
Query: 323 NVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ E A VS + IRR L
Sbjct: 246 ----LEAELHFPAH--VSPDCCALIRRCLAPK 271
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 160 bits (407), Expect = 6e-47
Identities = 53/274 (19%), Positives = 113/274 (41%), Gaps = 38/274 (13%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHN-LEKELIRKEIDIMNQLHHPK 166
++ ++ +G G FGVV + + +A K I + + L +E + +E+ + +L HP
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 167 LINLHDAFEDDDEMV------------LIFEFLSGGELFERITAPDYKMSEAEVIPVTLP 214
++ +A+ + + + + L + + + + +
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI- 123
Query: 215 ILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVK---- 270
Q + AV+ +H K ++H D+KP NI + VK+ DFGL T +D +E +
Sbjct: 124 --FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 271 ---------ISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGEND-VET 320
GT + +PE + D++++G++ + L L PF+ + + V T
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL---LYPFSTQMERVRT 236
Query: 321 LKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
L +V+ + F ++ +L +
Sbjct: 237 LTDVRNLKF---PPLFTQKYPCEYVMVQDMLSPS 267
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 159 bits (404), Expect = 9e-47
Identities = 78/250 (31%), Positives = 124/250 (49%), Gaps = 17/250 (6%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL---IRKEIDIMNQLHHP 165
+Y I++ +G G+F V TG A K I + ++ I +EI + L HP
Sbjct: 14 NYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVK 225
+I L+D + DE++++ E+ +G ELF+ I D KMSE E Q AV+
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRD-KMSEQEAR-----RFFQQIISAVE 126
Query: 226 HMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVE 285
+ H I+H D+KPEN++ NVK+ DFGL+ + +K S G+ +AAPE++
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS 184
Query: 286 REP-VGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGK 344
+ G D+W+ GV+ YV+L PF E+ KN+ + K +S
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KFLSPGAA 240
Query: 345 DFIRRLLLRN 354
I+R+L+ N
Sbjct: 241 GLIKRMLIVN 250
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 158 bits (402), Expect = 2e-46
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 18/254 (7%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLE-KELIRKEIDIMNQLHHPK 166
+ +D+++ +G GA+G V R T A K + + ++ E I+KEI I L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
++ + + + L E+ SGGELF+RI PD M E + Q V +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQ-----RFFHQLMAGVVY 120
Query: 227 MHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI---STGTAEFAAPEI 283
+H I H D+KPEN++ R+ N+K+ DFGLAT N ++ GT + APE+
Sbjct: 121 LHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 284 VEREP-VGFYTDMWAVGVLAYVLLSGLSPF--AGENDVETLKNVKACDWEFDEEAFKNVS 340
++R D+W+ G++ +L+G P+ ++ E + + +K +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK---KTYLNPWKKID 235
Query: 341 EEGKDFIRRLLLRN 354
+ ++L+ N
Sbjct: 236 SAPLALLHKILVEN 249
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 160 bits (406), Expect = 2e-46
Identities = 75/250 (30%), Positives = 123/250 (49%), Gaps = 17/250 (6%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL---IRKEIDIMNQLHHP 165
Y I E +G G+FG V KT A KFI + ++ + +EI + L HP
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVK 225
+I L+D ++V++ E+ +GGELF+ I +M+E E Q A++
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKK-RMTEDEGR-----RFFQQIICAIE 122
Query: 226 HMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVE 285
+ H I+H D+KPEN++ NVK+ DFGL+ + +K S G+ +AAPE++
Sbjct: 123 YCHRHKIVHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIN 180
Query: 286 REP-VGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGK 344
+ G D+W+ G++ YV+L G PF E K V +C + +S +
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP----DFLSPGAQ 236
Query: 345 DFIRRLLLRN 354
IRR+++ +
Sbjct: 237 SLIRRMIVAD 246
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 160 bits (407), Expect = 2e-46
Identities = 39/302 (12%), Positives = 78/302 (25%), Gaps = 54/302 (17%)
Query: 96 PQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK---ELI 152
VD S ++E + G VV R+ + FA K + + E +
Sbjct: 50 ETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERL 109
Query: 153 RKEIDIMNQLHH------------------------PKLINLHDAFEDDD--EMVLIFEF 186
+ +L P L +D +L+
Sbjct: 110 HEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPA 169
Query: 187 LSG-----GELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPEN 241
S + + + +T ++ ++ K ++H P+N
Sbjct: 170 ASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIR-----LAANLQSKGLVHGHFTPDN 224
Query: 242 IMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVERE--PVGFYTDMWAVG 299
+ + + D K S+ +A E + + W +G
Sbjct: 225 LFIMPDG--RLMLGDVSALWK--VGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLG 280
Query: 300 VLAYVLLSGLSPFAGEN-------DVETLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLL 352
+ Y + PF +L+ F + + K I R L
Sbjct: 281 LSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSC--TPLPDFVKTLIGRFLN 338
Query: 353 RN 354
+
Sbjct: 339 FD 340
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 158 bits (402), Expect = 1e-45
Identities = 64/258 (24%), Positives = 127/258 (49%), Gaps = 33/258 (12%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK---ELIRKEIDIMNQLHH 164
D +D ++ +GTG+FG V + +++GN +A K + ++ E E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 165 PKLINLHDAFEDDDEMVLIFEFLSGGELF------ERITAPDYKMSEAEVIPVTLPILMT 218
P L+ L +F+D+ + ++ E+++GGE+F R + P + A+++
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-------- 152
Query: 219 QTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--GTA 276
+++H ++I+ D+KPEN++ + +++ DFG A ++ + T GT
Sbjct: 153 ----TFEYLHSLDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRVKG----RTWTLCGTP 202
Query: 277 EFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAF 336
E APEI+ + D WA+GVL Y + +G PF + ++ + + + F
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP---- 258
Query: 337 KNVSEEGKDFIRRLLLRN 354
+ S + KD +R LL +
Sbjct: 259 SHFSSDLKDLLRNLLQVD 276
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 161 bits (408), Expect = 2e-45
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL---IRKEIDIMNQLHHP 165
HY + + +G G FG V + TG+ A K + ++ IR+EI + HP
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVK 225
+I L+ ++ ++ E++SGGELF+ I ++ E E L Q V
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-RLDEKESR-----RLFQQILSGVD 130
Query: 226 HMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVE 285
+ H ++H D+KPEN++ N K+ DFGL+ + E ++ S G+ +AAPE++
Sbjct: 131 YCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS 188
Query: 286 REP-VGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGK 344
G D+W+ GV+ Y LL G PF ++ K + + + ++
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLNPSVI 244
Query: 345 DFIRRLLLRN 354
++ +L +
Sbjct: 245 SLLKHMLQVD 254
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 162 bits (412), Expect = 2e-45
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 23/257 (8%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK---------EIDI 158
+ + +G G FG V C+ R TG ++A K LEK+ I+K E I
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKK------LEKKRIKKRKGEAMALNEKQI 237
Query: 159 MNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERIT-APDYKMSEAEVIPVTLPILM 217
+ +++ +++L A+E D + L+ ++GG+L I EA + I
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAE 277
++ +H + I++ D+KPENI+ ++++ D GLA + + +K GT
Sbjct: 298 -----GLEDLHRERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 278 FAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFK 337
+ APE+V+ E F D WA+G L Y +++G SPF + V+ E EE +
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSE 410
Query: 338 NVSEEGKDFIRRLLLRN 354
S + + +LL ++
Sbjct: 411 RFSPQARSLCSQLLCKD 427
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 156 bits (397), Expect = 3e-45
Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 33/258 (12%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK---ELIRKEIDIMNQLHH 164
+ IL +GTG+FG VH R R G +A K + + E E +++ + H
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 165 PKLINLHDAFEDDDEMVLIFEFLSGGELF------ERITAPDYKMSEAEVIPVTLPILMT 218
P +I + F+D ++ +I +++ GGELF +R P K AEV
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL-------- 117
Query: 219 QTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--GTA 276
A++++H K+II+ D+KPENI+ ++K+ DFG A K P+ T GT
Sbjct: 118 ----ALEYLHSKDIIYRDLKPENILLDKNG--HIKITDFGFA-KYVPD---VTYTLCGTP 167
Query: 277 EFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAF 336
++ APE+V +P D W+ G+L Y +L+G +PF N ++T + + + F
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP---- 223
Query: 337 KNVSEEGKDFIRRLLLRN 354
+E+ KD + RL+ R+
Sbjct: 224 PFFNEDVKDLLSRLITRD 241
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 156 bits (396), Expect = 4e-45
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 18/254 (7%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLE-KELIRKEIDIMNQLHHPK 166
+ +D+++ +G GA+G V R T A K + + ++ E I+KEI I L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
++ + + + L E+ SGGELF+RI PD M E + Q V +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQ-----RFFHQLMAGVVY 120
Query: 227 MHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI---STGTAEFAAPEI 283
+H I H D+KPEN++ R+ N+K+ DFGLAT N ++ GT + APE+
Sbjct: 121 LHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 284 VEREP-VGFYTDMWAVGVLAYVLLSGLSPF--AGENDVETLKNVKACDWEFDEEAFKNVS 340
++R D+W+ G++ +L+G P+ ++ E + + +K +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK---KTYLNPWKKID 235
Query: 341 EEGKDFIRRLLLRN 354
+ ++L+ N
Sbjct: 236 SAPLALLHKILVEN 249
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 154 bits (392), Expect = 1e-44
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK------------------- 149
Y + +EIG G++GVV +A K + + +
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 150 -------ELIRKEIDIMNQLHHPKLINLHDAFED--DDEMVLIFEFLSGGELFERITAPD 200
E + +EI I+ +L HP ++ L + +D +D + ++FE ++ G + E T
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK- 132
Query: 201 YKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA 260
+SE + ++++H + IIH D+KP N++ ++K+ DFG++
Sbjct: 133 -PLSEDQAR-----FYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIKIADFGVS 184
Query: 261 TKL-DPNEVVKISTGTAEFAAPEIV---EREPVGFYTDMWAVGVLAYVLLSGLSPFAGEN 316
+ + ++ + GT F APE + + G D+WA+GV Y + G PF E
Sbjct: 185 NEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
Query: 317 DVETLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ +K+ EF + +++E+ KD I R+L +N
Sbjct: 245 IMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKN 280
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 153 bits (389), Expect = 2e-44
Identities = 54/275 (19%), Positives = 115/275 (41%), Gaps = 38/275 (13%)
Query: 104 SSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQ 161
S + LE+IG+G FG V +C +R G I+A K P++ +++++ +E+
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 66
Query: 162 L-HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYK---MSEAEVIPVTLPILM 217
L H ++ A+ +DD M++ E+ +GG L + I+ EAE+ + L +
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIM-----------------CQTRNSTNVKMIDFGLA 260
++++H +++H+D+KP NI N K+ D G
Sbjct: 127 -----GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 181
Query: 261 TKLDPNEVVKISTGTAEFAAPEIV-EREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVE 319
T++ +V G + F A E++ E D++A+ + +
Sbjct: 182 TRISSPQVE---EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH 238
Query: 320 TLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
++ + + +S+E + ++ ++ +
Sbjct: 239 EIRQGRL------PRIPQVLSQEFTELLKVMIHPD 267
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 153 bits (389), Expect = 3e-44
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 26/259 (10%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP----VSHNLEKELIRKEIDIMNQLHH 164
Y + + +G G++G V + +T A K + + ++KEI ++ +L H
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 165 PKLINLHD--AFEDDDEMVLIFEFLSGG--ELFERITAPDYKMSEAEVIPVTLPILMTQT 220
+I L D E+ +M ++ E+ G E+ + + P+ + + Q
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV--PEKRFPVCQAH-----GYFCQL 118
Query: 221 SPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDP---NEVVKISTGTAE 277
++++H + I+H D+KP N++ T +K+ G+A L P ++ + S G+
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTTGG--TLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 278 FAAPEIV--EREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEA 335
F PEI GF D+W+ GV Y + +GL PF G+N + +N+ + +
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGD- 235
Query: 336 FKNVSEEGKDFIRRLLLRN 354
D ++ +L
Sbjct: 236 ---CGPPLSDLLKGMLEYE 251
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 154 bits (389), Expect = 1e-43
Identities = 38/295 (12%), Positives = 85/295 (28%), Gaps = 66/295 (22%)
Query: 109 HYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK-------------- 154
+G +++TG F + I++
Sbjct: 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133
Query: 155 --------------EIDIMNQLHHPKLINLHDAFEDDDEM--VLIFEFLS------GGEL 192
D++ K+I + D + ++ + G L
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193
Query: 193 FERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNV 252
+ + + +TL ++ + +H ++H ++P +I+ R V
Sbjct: 194 LSHSST-HKSLVHHARLQLTLQVIR-----LLASLHHYGLVHTYLRPVDIVLDQRG--GV 245
Query: 253 KMIDFGLATKLDPNEVVKISTGTAEFAAPEIVERE-----------PVGFYTDMWAVGVL 301
+ F + V S+ + F PE+ R + F D WA+G++
Sbjct: 246 FLTGFEHLVRDGARVV---SSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302
Query: 302 AYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRNKE 356
Y + P + + + + KN+ + + + L KE
Sbjct: 303 IYWIWCADLPITKDAALGGSEWIFRSC--------KNIPQPVRALLEGFLRYPKE 349
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 152 bits (386), Expect = 2e-43
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 42/264 (15%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 158
+ +D L+ +G G FG V RE+ TG +A K L KE+I + E+ +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKI------LRKEVIIAKDEVAHTVTESRV 58
Query: 159 MNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERI------TAPDYKMSEAEVIPVT 212
+ HP L L AF+ D + + E+ +GGELF + T + AE++
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS-- 116
Query: 213 LPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIS 272
A++++H +++++ D+K EN+M ++K+ DFGL K ++ +
Sbjct: 117 ----------ALEYLHSRDVVYRDIKLENLMLDK--DGHIKITDFGLC-KEGISDGATMK 163
Query: 273 T--GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWE 330
T GT E+ APE++E G D W +GV+ Y ++ G PF ++ + + +
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 331 FDEEAFKNVSEEGKDFIRRLLLRN 354
F + +S E K + LL ++
Sbjct: 224 FP----RTLSPEAKSLLAGLLKKD 243
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 151 bits (384), Expect = 2e-43
Identities = 82/263 (31%), Positives = 135/263 (51%), Gaps = 36/263 (13%)
Query: 108 DHYDILEEIGTGAFGVVHRCRE---RKTGNIFAAKFIP----VSHNLEKELIRKEIDIMN 160
+ +++L +G G +G V + R+ TG IFA K + V + + + E +I+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 161 QLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSE-------AEVIPVTL 213
++ HP +++L AF+ ++ LI E+LSGGELF ++ + E AE+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEISM--- 132
Query: 214 PILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST 273
A+ H+H+K II+ D+KPENIM + +VK+ DFGL K ++ T
Sbjct: 133 ---------ALGHLHQKGIIYRDLKPENIMLNHQG--HVKLTDFGLC-KESIHDGTVTHT 180
Query: 274 --GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEF 331
GT E+ APEI+ R D W++G L Y +L+G PF GEN +T+ + C
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 332 DEEAFKNVSEEGKDFIRRLLLRN 354
+++E +D +++LL RN
Sbjct: 241 P----PYLTQEARDLLKKLLKRN 259
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 153 bits (389), Expect = 2e-42
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 38/266 (14%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK---------EIDI 158
D + +G G FG V C+ + TG ++A K L K+ ++K E I
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKK------LNKKRLKKRKGYQGAMVEKKI 238
Query: 159 MNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKM---SEAEVIPVTLPI 215
+ ++H +++L AFE ++ L+ ++GG++ I D E I T I
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 216 LMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST-- 273
+ ++H+H++NII+ D+KPEN++ NV++ D GLA K
Sbjct: 299 VS-----GLEHLHQRNIIYRDLKPENVLLDDDG--NVRISDLGLA-VELKAGQTKTKGYA 350
Query: 274 GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDV----ETLKNVKACDW 329
GT F APE++ E F D +A+GV Y +++ PF + E + V
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL---- 406
Query: 330 EFDEEAF-KNVSEEGKDFIRRLLLRN 354
+ S KDF LL ++
Sbjct: 407 -EQAVTYPDKFSPASKDFCEALLQKD 431
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 149 bits (379), Expect = 2e-42
Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 45/266 (16%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-IM----- 159
+ + + + +G G+FG V +KT FA K L+K+++ +++ M
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA------LKKDVVLMDDDVECTMVEKRV 70
Query: 160 --NQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSE-------AEVIP 210
HP L ++ F+ + + + E+L+GG+L I + K AE+I
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIIL 129
Query: 211 VTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVK 270
++ +H K I++ D+K +NI+ ++K+ DFG+ K + K
Sbjct: 130 ------------GLQFLHSKGIVYRDLKLDNILLDKDG--HIKIADFGMC-KENMLGDAK 174
Query: 271 IST--GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACD 328
+T GT ++ APEI+ + D W+ GVL Y +L G SPF G+++ E +++ +
Sbjct: 175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN 234
Query: 329 WEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ + + +E KD + +L +R
Sbjct: 235 PFYP----RWLEKEAKDLLVKLFVRE 256
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 148 bits (377), Expect = 3e-42
Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 32/260 (12%)
Query: 108 DHYDILEEIGTGAFGVVHRCRE---RKTGNIFAAKFIPVSHNLEKELI--RKEIDIMNQL 162
+++L+ +G G+FG V ++ ++A K + + ++ + + E DI+ ++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERI------TAPDYKMSEAEVIPVTLPIL 216
+HP ++ LH AF+ + ++ LI +FL GG+LF R+ T D K AE+
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL------ 137
Query: 217 MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--G 274
A+ H+H II+ D+KPENI+ ++K+ DFGL+ K + K + G
Sbjct: 138 ------ALDHLHSLGIIYRDLKPENILLDEEG--HIKLTDFGLS-KESIDHEKKAYSFCG 188
Query: 275 TAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEE 334
T E+ APE+V R D W+ GVL + +L+G PF G++ ET+ +
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP-- 246
Query: 335 AFKNVSEEGKDFIRRLLLRN 354
+ +S E + +R L RN
Sbjct: 247 --QFLSPEAQSLLRMLFKRN 264
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 150 bits (380), Expect = 3e-42
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 43/265 (16%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------- 157
+ L+ IG G+FG V R + +A K L+K+ I +KE
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKV------LQKKAILKKKEEKHIMSERNV 91
Query: 158 IMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERI------TAPDYKMSEAEVIPV 211
++ + HP L+ LH +F+ D++ + ++++GGELF + P + AE+
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIAS- 150
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI 271
A+ ++H NI++ D+KPENI+ ++ ++ + DFGL K +
Sbjct: 151 -----------ALGYLHSLNIVYRDLKPENILLDSQG--HIVLTDFGLC-KENIEHNSTT 196
Query: 272 ST--GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDW 329
ST GT E+ APE++ ++P D W +G + Y +L GL PF N E N+
Sbjct: 197 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL 256
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRN 354
+ N++ + + LL ++
Sbjct: 257 QLK----PNITNSARHLLEGLLQKD 277
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 149 bits (378), Expect = 4e-42
Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 43/265 (16%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------- 157
D+++ + +G G+FG V R ++TG+++A K L+K++I +++
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV------LKKDVILQDDDVECTMTEKRI 76
Query: 158 IMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELF------ERITAPDYKMSEAEVIPV 211
+ +HP L L F+ D + + EF++GG+L R + AE+I
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIIS- 135
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI 271
A+ +H+K II+ D+K +N++ + K+ DFG+ K V
Sbjct: 136 -----------ALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGMC-KEGICNGVTT 181
Query: 272 ST--GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDW 329
+T GT ++ APEI++ G D WA+GVL Y +L G +PF EN+ + + + +
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV 241
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRN 354
+ + E+ ++ + +N
Sbjct: 242 VYP----TWLHEDATGILKSFMTKN 262
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 147 bits (373), Expect = 5e-42
Identities = 74/260 (28%), Positives = 125/260 (48%), Gaps = 35/260 (13%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
Y E+IG GA G V+ + TG A + + + +KELI EI +M + +P +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 168 INLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHM 227
+N D++ DE+ ++ E+L+GG L + +T M E ++ V L A++ +
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQ-----ALEFL 132
Query: 228 HEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--GTAEFAAPEIVE 285
H +IH D+K +NI+ +VK+ DFG ++ P E K ST GT + APE+V
Sbjct: 133 HSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITP-EQSKRSTMVGTPYWMAPEVVT 189
Query: 286 REPVGFYTDMWAVGVLAYVLLSGLSPFAGE-----------NDVETLKNVKACDWEFDEE 334
R+ G D+W++G++A ++ G P+ E N L+N
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---------- 239
Query: 335 AFKNVSEEGKDFIRRLLLRN 354
+ +S +DF+ R L +
Sbjct: 240 --EKLSAIFRDFLNRCLEMD 257
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 148 bits (377), Expect = 6e-42
Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 43/265 (16%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------- 157
++ L +G G+FG V + T ++A K L+K+++ +++
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKI------LKKDVVIQDDDVECTMVEKRV 73
Query: 158 IMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELF------ERITAPDYKMSEAEVIPV 211
+ P L LH F+ D + + E+++GG+L R P AE+
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI- 132
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI 271
+ + K II+ D+K +N+M + ++K+ DFG+ K + + V
Sbjct: 133 -----------GLFFLQSKGIIYRDLKLDNVMLDSEG--HIKIADFGMC-KENIWDGVTT 178
Query: 272 ST--GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDW 329
T GT ++ APEI+ +P G D WA GVL Y +L+G +PF GE++ E +++ +
Sbjct: 179 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV 238
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRN 354
+ K++S+E + L+ ++
Sbjct: 239 AYP----KSMSKEAVAICKGLMTKH 259
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 147 bits (373), Expect = 8e-42
Identities = 62/262 (23%), Positives = 124/262 (47%), Gaps = 35/262 (13%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
D +IG G+ G+V RE+ +G A K + + +EL+ E+ IM H +
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 168 INLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHM 227
+ ++ ++ +E+ ++ EFL GG L + ++ +++E ++ V +L A+ ++
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQ-----ALAYL 157
Query: 228 HEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--GTAEFAAPEIVE 285
H + +IH D+K ++I+ VK+ DFG ++ +V K + GT + APE++
Sbjct: 158 HAQGVIHRDIKSDSILLTLDG--RVKLSDFGFCAQIS-KDVPKRKSLVGTPYWMAPEVIS 214
Query: 286 REPVGFYTDMWAVGVLAYVLLSGLSPFAGE-----------NDVETLKNVKACDWEFDEE 334
R D+W++G++ ++ G P+ + + LKN
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---------- 264
Query: 335 AFKNVSEEGKDFIRRLLLRNKE 356
VS +DF+ R+L+R+ +
Sbjct: 265 --HKVSPVLRDFLERMLVRDPQ 284
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 152 bits (386), Expect = 2e-41
Identities = 67/306 (21%), Positives = 130/306 (42%), Gaps = 41/306 (13%)
Query: 66 DETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVH 125
+E + +RG +K + D++ K V + + + IG G FG V+
Sbjct: 151 EEICQNLRGDVFQKFIESDKFTRFCQWKNVEL----NIHLTMNDFSVHRIIGRGGFGEVY 206
Query: 126 RCRERKTGNIFAAKFIPVSHNLEKELI--RKEID----------IMNQLHHPKLINLHDA 173
CR+ TG ++A K L+K+ I ++ +++ P ++ + A
Sbjct: 207 GCRKADTGKMYAMKC------LDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA 260
Query: 174 FEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNII 233
F D++ I + ++GG+L ++ SEA++ I++ ++HMH + ++
Sbjct: 261 FHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIIL-----GLEHMHNRFVV 314
Query: 234 HLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVER-EPVGFY 292
+ D+KP NI+ +V++ D GLA + S GT + APE++++
Sbjct: 315 YRDLKPANILLDEHG--HVRISDLGLA-CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 293 TDMWAVGVLAYVLLSGLSPFAGENDV---ETLKNVKACDWEFDEEAF-KNVSEEGKDFIR 348
D +++G + + LL G SPF E + + S E + +
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-----TMAVELPDSFSPELRSLLE 426
Query: 349 RLLLRN 354
LL R+
Sbjct: 427 GLLQRD 432
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 148 bits (375), Expect = 5e-41
Identities = 68/267 (25%), Positives = 125/267 (46%), Gaps = 43/267 (16%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 158
+ ++ L+ +G G FG V +E+ TG +A K L+KE+I + E+ +
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKI------LKKEVIVAKDEVAHTLTENRV 201
Query: 159 MNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERI------TAPDYKMSEAEVIPVT 212
+ HP L L +F+ D + + E+ +GGELF + + + AE++
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS-- 259
Query: 213 LPILMTQTSPAVKHMH-EKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI 271
A+ ++H EKN+++ D+K EN+M ++K+ DFGL K + +
Sbjct: 260 ----------ALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGLC-KEGIKDGATM 306
Query: 272 ST--GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDW 329
T GT E+ APE++E G D W +GV+ Y ++ G PF ++ + + + +
Sbjct: 307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 366
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRNKE 356
F + + E K + LL ++ +
Sbjct: 367 RFP----RTLGPEAKSLLSGLLKKDPK 389
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 151 bits (382), Expect = 6e-41
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 43/265 (16%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 158
++ L +G G+FG V + T ++A K L+K+++ +++ +
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKI------LKKDVVIQDDDVECTMVEKRV 394
Query: 159 MNQ-LHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERI------TAPDYKMSEAEVIPV 211
+ P L LH F+ D + + E+++GG+L I P AE+
Sbjct: 395 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI- 453
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI 271
+ + K II+ D+K +N+M + ++K+ DFG+ K + + V
Sbjct: 454 -----------GLFFLQSKGIIYRDLKLDNVMLDSEG--HIKIADFGMC-KENIWDGVTT 499
Query: 272 ST--GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDW 329
T GT ++ APEI+ +P G D WA GVL Y +L+G +PF GE++ E +++ +
Sbjct: 500 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV 559
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRN 354
+ K++S+E + L+ ++
Sbjct: 560 AYP----KSMSKEAVAICKGLMTKH 580
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 143 bits (363), Expect = 4e-40
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 54/275 (19%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 158
+D+L IG G++ V R +KT I+A K ++KEL+ ++ID +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV------VKKELVNDDEDIDWVQTEKHV 62
Query: 159 MNQ-LHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSE-------AEVIP 210
Q +HP L+ LH F+ + + + E+++GG+L + K+ E AE+
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISL 121
Query: 211 VTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVK 270
A+ ++HE+ II+ D+K +N++ + ++K+ D+G+ K
Sbjct: 122 ------------ALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMC-KEGLRPGDT 166
Query: 271 IST--GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFA---------GENDVE 319
ST GT + APEI+ E GF D WA+GVL + +++G SPF +
Sbjct: 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 226
Query: 320 TLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ + +++S + ++ L ++
Sbjct: 227 LFQVILEKQIRIP----RSLSVKAASVLKSFLNKD 257
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 142 bits (359), Expect = 7e-40
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 38/267 (14%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
+ ++I+ E+G GAFG V++ + ++TG + AAK I E E EI+I+ HP +
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 168 INLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHM 227
+ L A+ D ++ ++ EF GG + + D ++E ++ V +L A+ +
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE-----ALNFL 133
Query: 228 HEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--GTAEFAAPEIVE 285
H K IIH D+K N++ T ++++ DFG++ K + K + GT + APE+V
Sbjct: 134 HSKRIIHRDLKAGNVLM-TLEG-DIRLADFGVSAKNL-KTLQKRDSFIGTPYWMAPEVVM 190
Query: 286 REPV-----GFYTDMWAVGVLAYVLLSGLSPFAGE-----------NDVETLKNVKACDW 329
E + + D+W++G+ + P +D TL W
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPS--KW 248
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRNKE 356
S E +DF++ L +N E
Sbjct: 249 ----------SVEFRDFLKIALDKNPE 265
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 142 bits (360), Expect = 3e-39
Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 52/274 (18%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEID-------I 158
+D+L IG G++ V R +KT I+A + ++KEL+ ++ID +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRV------VKKELVNDDEDIDWVQTEKHV 105
Query: 159 MNQ-LHHPKLINLHDAFEDDDEMVLIFEFLSGGELF------ERITAPDYKMSEAEVIPV 211
Q +HP L+ LH F+ + + + E+++GG+L ++ + AE+
Sbjct: 106 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL- 164
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI 271
A+ ++HE+ II+ D+K +N++ + ++K+ D+G+ K
Sbjct: 165 -----------ALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMC-KEGLRPGDTT 210
Query: 272 ST--GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFA---------GENDVET 320
ST GT + APEI+ E GF D WA+GVL + +++G SPF +
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 270
Query: 321 LKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ + +++S + ++ L ++
Sbjct: 271 FQVILEKQIRIP----RSLSVKAASVLKSFLNKD 300
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 139 bits (352), Expect = 1e-38
Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 19/264 (7%)
Query: 97 QPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEI 156
+PVD + +G G+FG VHR ++++TG A K + + + +E+
Sbjct: 47 KPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEEL 101
Query: 157 DIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPIL 216
L P+++ L+ A + + + E L GG L + I + E + L
Sbjct: 102 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQAL 160
Query: 217 MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTA 276
++++H + I+H DVK +N++ + + + + DFG A L P+ + K
Sbjct: 161 E-----GLEYLHTRRILHGDVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 277 EFA------APEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWE 330
APE+V +P D+W+ + +L+G P+ + +
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPP 274
Query: 331 FDEEAFKNVSEEGKDFIRRLLLRN 354
E + + I+ L +
Sbjct: 275 IREIP-PSCAPLTAQAIQEGLRKE 297
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 140 bits (354), Expect = 2e-38
Identities = 35/287 (12%), Positives = 81/287 (28%), Gaps = 51/287 (17%)
Query: 107 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI---RKEIDIMNQL- 162
+G +++TG F + I ++E+ + L
Sbjct: 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR 136
Query: 163 ---------------------HHPKLINLHDAFEDDDEMVLIFEFL-------SGGELFE 194
P+ + D+ +M ++ F + E
Sbjct: 137 GIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGE 196
Query: 195 RITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKM 254
+ + ++ V L + Q + +H ++H ++P +I+ R V +
Sbjct: 197 VLLS-HSSTHKSLVHHARLQL-TLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG--GVFL 252
Query: 255 IDFGLATKLDPNEVVKIST--GTAEFAAPEIVEREP-----VGFYTDMWAVGVLAYVLLS 307
F + + V I E A ++ + F D W +G+ Y +
Sbjct: 253 TGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312
Query: 308 GLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
P + + + + F N+ + + + L
Sbjct: 313 ADLPNTDDAALGGSEWI------FRSCK--NIPQPVRALLEGFLRYP 351
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 137 bits (348), Expect = 3e-38
Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 35/262 (13%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
+ +D+LE++G G++G V++ ++TG I A K +PV +L++ I KEI IM Q P +
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE--IIKEISIMQQCDSPHV 86
Query: 168 INLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHM 227
+ + ++ + ++ ++ E+ G + + I + ++E E+ + L ++++
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLK-----GLEYL 141
Query: 228 HEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--GTAEFAAPEIVE 285
H IH D+K NI+ T + K+ DFG+A +L + + K +T GT + APE+++
Sbjct: 142 HFMRKIHRDIKAGNILLNTEG--HAKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQ 198
Query: 286 REPVGFYTDMWAVGVLAYVLLSGLSPFAGE-----------NDVETLKNVKACDWEFDEE 334
D+W++G+ A + G P+A N T +
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKP---------- 248
Query: 335 AFKNVSEEGKDFIRRLLLRNKE 356
+ S+ DF+++ L+++ E
Sbjct: 249 --ELWSDNFTDFVKQCLVKSPE 268
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 137 bits (346), Expect = 4e-38
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 34/271 (12%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV-SHNLEKELIRKEIDIMNQLHHPK 166
D Y++ E IG+GA VV A K I + + + KEI M+Q HHP
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLP-----ILMTQTS 221
+++ + +F DE+ L+ + LSGG + + I + +++ E L ++ +
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIK---HIVAKGEHKSGVLDESTIATILREVL 131
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKL----DPNEVVKIST--GT 275
++++H+ IH DVK NI+ +V++ DFG++ L D T GT
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDG--SVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 276 AEFAAPEIVER-EPVGFYTDMWAVGVLAYVLLSGLSPFAGE-----------NDVETLKN 323
+ APE++E+ F D+W+ G+ A L +G +P+ ND +L+
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 324 VKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
D+E K + + I L ++
Sbjct: 250 GVQ-----DKEMLKKYGKSFRKMISLCLQKD 275
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 137 bits (346), Expect = 4e-38
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 13/212 (6%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV-SHNLEKELIRKEIDIMNQLHHPK 166
+ + LE+IG G+FG V + + +T + A K I + E E I++EI +++Q P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
+ + ++ D ++ +I E+L GG + + + E ++ + IL + +
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILK-----GLDY 134
Query: 227 MHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--GTAEFAAPEIV 284
+H + IH D+K N++ VK+ DFG+A +L + +K +T GT + APE++
Sbjct: 135 LHSEKKIHRDIKAANVL--LSEHGEVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVI 191
Query: 285 EREPVGFYTDMWAVGVLAYVLLSGLSPFAGEN 316
++ D+W++G+ A L G P + +
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELH 223
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 137 bits (347), Expect = 1e-37
Identities = 75/269 (27%), Positives = 137/269 (50%), Gaps = 40/269 (14%)
Query: 108 DHYDILEEIGTGAFGVVHRCRE---RKTGNIFAAKFIP----VSHNLEKELIRKEIDIMN 160
+++++L+ +GTGA+G V R+ TG ++A K + V E R E ++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 161 QL-HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERI------TAPDYKMSEAEVIPVTL 213
+ P L+ LH AF+ + ++ LI ++++GGELF + T + ++ E++
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIV---- 169
Query: 214 PILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST 273
A++H+H+ II+ D+K ENI+ ++ +V + DFGL+ + +E +
Sbjct: 170 --------LALEHLHKLGIIYRDIKLENILLD--SNGHVVLTDFGLSKEFVADETERAYD 219
Query: 274 --GTAEFAAPEIVEREPVGFYT--DMWAVGVLAYVLLSGLSPFAGEND----VETLKNVK 325
GT E+ AP+IV G D W++GVL Y LL+G SPF + + E + +
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279
Query: 326 ACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ + + +S KD I+RLL+++
Sbjct: 280 KSEPPYP----QEMSALAKDLIQRLLMKD 304
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 139 bits (352), Expect = 9e-37
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 24/216 (11%)
Query: 108 DHYDILEEIGTGAFGVVHRCR-ERKTGNIFAAKFIPVSHNLE-KELIRKEIDIMNQLHHP 165
Y++ I G G ++ G K + S + E + + E + ++ HP
Sbjct: 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHP 139
Query: 166 KLINLHDAFEDDDEMV-----LIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQT 220
++ + + E D ++ E++ G L + AE I L IL
Sbjct: 140 SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK---LPVAEAIAYLLEIL---- 192
Query: 221 SPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLD-PNEVVKISTGTAEFA 279
PA+ ++H +++ D+KPENIM T +K+ID G ++++ + GT F
Sbjct: 193 -PALSYLHSIGLVYNDLKPENIM-LTEE--QLKLIDLGAVSRINSFGYLY----GTPGFQ 244
Query: 280 APEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGE 315
APEIV P TD++ VG L L G
Sbjct: 245 APEIVRTGPTV-ATDIYTVGRTLAALTLDLPTRNGR 279
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 130 bits (330), Expect = 1e-35
Identities = 81/284 (28%), Positives = 124/284 (43%), Gaps = 57/284 (20%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK----EIDIMNQLH 163
+ Y+ + +IG G++GVV +CR R TG I A K S + +I+K EI ++ QL
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLK 60
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPA 223
HP L+NL + F + L+FE+ + + + E V + QT A
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCD-HTVLHELDRYQRGVPEHLV-----KSITWQTLQA 114
Query: 224 VKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA----TKLDP--NEVVKISTGTAE 277
V H+ N IH DVKPENI+ + +K+ DFG A D +EV T
Sbjct: 115 VNFCHKHNCIHRDVKPENILITKHS--VIKLCDFGFARLLTGPSDYYDDEVA-----TRW 167
Query: 278 FAAPEIVEREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETL------------- 321
+ +PE++ + Y D+WA+G + LLSG+ + G++DV+ L
Sbjct: 168 YRSPELLVGDT--QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPR 225
Query: 322 -----------KNVKACDWEFD---EEAFKNVSEEGKDFIRRLL 351
VK D E E F N+S ++ L
Sbjct: 226 HQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCL 269
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 129 bits (326), Expect = 3e-35
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 18/251 (7%)
Query: 114 EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHHPKLINLH 171
EIG G+F V++ + +T A + + E ++E +++ L HP ++ +
Sbjct: 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFY 91
Query: 172 DAFED----DDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHM 227
D++E +VL+ E ++ G L + M + IL ++ +
Sbjct: 92 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILK-----GLQFL 145
Query: 228 HEKN--IIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVE 285
H + IIH D+K +NI +VK+ D GLAT + K GT EF APE+ E
Sbjct: 146 HTRTPPIIHRDLKCDNIFITGPTG-SVKIGDLGLATLKRASF-AKAVIGTPEFMAPEMYE 203
Query: 286 REPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKD 345
+ D++A G+ + + P++ + + + K E K+
Sbjct: 204 EK-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR-RVTSGVKPASFDKVAIPEVKE 261
Query: 346 FIRRLLLRNKE 356
I + +NK+
Sbjct: 262 IIEGCIRQNKD 272
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 129 bits (327), Expect = 5e-35
Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 61/286 (21%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK----EIDIMNQLH 163
+ Y+ L +G G++G+V +CR + TG I A K S + ++++K EI ++ QL
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLR 82
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPA 223
H L+NL + + L+FEF+ + + + + V + Q
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVD-HTILDDLELFPNGLDYQVV-----QKYLFQIING 136
Query: 224 VKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA-TKLDP-----NEVVKISTGTAE 277
+ H NIIH D+KPENI+ VK+ DFG A T P +EV T
Sbjct: 137 IGFCHSHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAAPGEVYDDEVA-----TRW 189
Query: 278 FAAPEIVEREPVG--FYT---DMWAVGVLAYVLLSGLSPFAGENDVETL----------- 321
+ APE++ VG Y D+WA+G L + G F G++D++ L
Sbjct: 190 YRAPELL----VGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLI 245
Query: 322 -------------KNVKACDWEFD---EEAFKNVSEEGKDFIRRLL 351
V+ + + E + +SE D ++ L
Sbjct: 246 PRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCL 291
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 130 bits (328), Expect = 5e-35
Identities = 64/267 (23%), Positives = 108/267 (40%), Gaps = 43/267 (16%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH---NLEKELIRKEIDIMNQLHH 164
+ L EIG G+FG V+ R+ + + A K + S N + + I KE+ + +L H
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 165 PKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAV 224
P I + + L+ E+ G + + + E E+ VT L +
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTHGALQ-----GL 167
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDP-NEVVKISTGTAEFAAPEI 283
++H N+IH DVK NI+ VK+ DFG A+ + P N V GT + APE+
Sbjct: 168 AYLHSHNMIHRDVKAGNIL--LSEPGLVKLGDFGSASIMAPANSFV----GTPYWMAPEV 221
Query: 284 VEREPVGFYT---DMWAVGVLAYVLLSGLSPFAGE-----------NDVETLKNVKACDW 329
+ G Y D+W++G+ L P N+ L++
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQS------ 275
Query: 330 EFDEEAFKNVSEEGKDFIRRLLLRNKE 356
+ SE ++F+ L + +
Sbjct: 276 -------GHWSEYFRNFVDSCLQKIPQ 295
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 128 bits (322), Expect = 4e-34
Identities = 50/240 (20%), Positives = 108/240 (45%), Gaps = 11/240 (4%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDIMNQLHHPK 166
D ++ + E+G G GVV + + +G + A K I + I +E+ ++++ + P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
++ + AF D E+ + E + GG L +++ ++ E + V++ ++ + +
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIK-----GLTY 146
Query: 227 MH-EKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIVE 285
+ + I+H DVKP NI+ +R +K+ DFG++ +L + + GT + +PE ++
Sbjct: 147 LREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQ 203
Query: 286 REPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFKNVSEEGKD 345
+D+W++G+ + G P + E E G+
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 127 bits (320), Expect = 4e-34
Identities = 59/320 (18%), Positives = 111/320 (34%), Gaps = 76/320 (23%)
Query: 104 SSVY-DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHN-LEKELIRKEIDIMNQ 161
+S Y ++ ++ +G G FGVV + + +A K I + + L +E + +E+ + +
Sbjct: 1 ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK 60
Query: 162 LHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSE---------------- 205
L HP ++ +A+ + E E P S
Sbjct: 61 LEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFST 120
Query: 206 --------AEVIPVTLPILM------------------------------TQTSPAVKHM 227
V L I M Q + AV+ +
Sbjct: 121 KNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFL 180
Query: 228 HEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVK-------------ISTG 274
H K ++H D+KP NI + VK+ DFGL T +D +E + G
Sbjct: 181 HSKGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238
Query: 275 TAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEE 334
T + +PE + D++++G++ + LL S V + +V+ +
Sbjct: 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFST--QMERVRIITDVRNLKFPLL-- 294
Query: 335 AFKNVSEEGKDFIRRLLLRN 354
F + ++ +L +
Sbjct: 295 -FTQKYPQEHMMVQDMLSPS 313
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 126 bits (318), Expect = 5e-34
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 38/257 (14%)
Query: 116 IGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFE 175
+G G +G+V+ R+ A K IP + + + +EI + L H ++ +F
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 176 DDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHL 235
++ + + E + GG L + + + + E + Q +K++H+ I+H
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT---IGFYTKQILEGLKYLHDNQIVHR 146
Query: 236 DVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIS-TGTAEFAAPEIVEREPVGFYT- 293
D+K +N++ T + +K+ DFG + +L + TGT ++ APEI+++ P G+
Sbjct: 147 DIKGDNVLINTYSGV-LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 294 -DMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEA---FK------------ 337
D+W++G + +G PF E E FK
Sbjct: 206 ADIWSLGCTIIEMATGKPPFY----------------ELGEPQAAMFKVGMFKVHPEIPE 249
Query: 338 NVSEEGKDFIRRLLLRN 354
++S E K FI + +
Sbjct: 250 SMSAEAKAFILKCFEPD 266
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 124 bits (314), Expect = 3e-33
Identities = 71/270 (26%), Positives = 136/270 (50%), Gaps = 42/270 (15%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQL-HHPK 166
++++E +G G +G V++ R KTG + A K + V+ + E+E I++EI+++ + HH
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRN 82
Query: 167 LINLHDAF------EDDDEMVLIFEFLSGGELFERITA-PDYKMSEAEVIPVTLPILMTQ 219
+ + AF DD++ L+ EF G + + I + E + + IL
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR-- 140
Query: 220 TSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--GTAE 277
+ H+H+ +IH D+K +N++ T N+ VK++DFG++ +LD V + +T GT
Sbjct: 141 ---GLSHLHQHKVIHRDIKGQNVLL-TENA-EVKLVDFGVSAQLD-RTVGRRNTFIGTPY 194
Query: 278 FAAPEIV--EREPVGFY---TDMWAVGVLAYVLLSGLSPFAGENDVETL----KN----V 324
+ APE++ + P Y +D+W++G+ A + G P + + L +N +
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL 254
Query: 325 KACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
K+ W S++ + FI L++N
Sbjct: 255 KSKKW----------SKKFQSFIESCLVKN 274
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 121 bits (306), Expect = 2e-32
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 21/258 (8%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDI-MNQLHHP 165
D + + E+G GA+GVV + R +G I A K I + N ++ + + ++DI M + P
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGG--ELFERITAPDYKMSEAEVIPVTLPILMTQTSPA 223
+ + A + ++ + E + + ++++ + E + + + I+ A
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK-----A 121
Query: 224 VKHMHEK-NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPE 282
++H+H K ++IH DVKP N++ VKM DFG++ L + I G + APE
Sbjct: 122 LEHLHSKLSVIHRDVKPSNVLINALG--QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPE 179
Query: 283 -IVEREPVGFYT---DMWAVGVLAYVLLSGLSPFAG-ENDVETLKN-VKACDWEFDEEAF 336
I Y+ D+W++G+ L P+ + LK V+ + + F
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF 239
Query: 337 KNVSEEGKDFIRRLLLRN 354
S E DF + L +N
Sbjct: 240 ---SAEFVDFTSQCLKKN 254
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 121 bits (305), Expect = 3e-32
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 13/214 (6%)
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRK---EIDIMNQLHHPK 166
Y I++++G G V+ + A K I + ++E +++ E+ +QL H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
++++ D E+DD L+ E++ G L E I + +S I T IL +KH
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTNQILD-----GIKH 126
Query: 227 MHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--GTAEFAAPEIV 284
H+ I+H D+KP+NI+ + +K+ DFG+A L + + + GT ++ +PE
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNK--TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 285 EREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDV 318
+ E TD++++G++ Y +L G PF GE V
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 123 bits (309), Expect = 4e-32
Identities = 42/221 (19%), Positives = 90/221 (40%), Gaps = 22/221 (9%)
Query: 108 DHYDILEEIGTGA--FGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLH 163
Y++L IG G V+ R + TG + I + + + ++ E+ + +
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN 84
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGELFERITA-PDYKMSEAEVIPVTLPILMTQTSP 222
HP ++ F D+E+ ++ F++ G + I M+E + + +L
Sbjct: 85 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLK----- 139
Query: 223 AVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPN--------EVVKISTG 274
A+ ++H +H VK +I+ V + + + + K S
Sbjct: 140 ALDYIHHMGYVHRSVKASHIL--ISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVK 197
Query: 275 TAEFAAPEIVEREPVG--FYTDMWAVGVLAYVLLSGLSPFA 313
+ +PE++++ G +D+++VG+ A L +G PF
Sbjct: 198 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 121 bits (307), Expect = 5e-32
Identities = 72/294 (24%), Positives = 125/294 (42%), Gaps = 59/294 (20%)
Query: 99 VDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL------I 152
+ + S Y+ L+ +G G F V++ R++ T I A K I + H E + +
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 153 RKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVT 212
R EI ++ +L HP +I L DAF + L+F+F+ +L I ++ + +
Sbjct: 61 R-EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHI---- 114
Query: 213 LPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA-TKLDP-----N 266
M T ++++H+ I+H D+KP N++ +K+ DFGLA + P +
Sbjct: 115 -KAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAKSFGSPNRAYTH 171
Query: 267 EVVKISTGTAEFAAPEIV--EREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETL 321
+VV T + APE++ R Y DMWAVG + LL + G++D++ L
Sbjct: 172 QVV-----TRWYRAPELLFGARM----YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL 222
Query: 322 KNV-KAC------DW----------EFD-------EEAFKNVSEEGKDFIRRLL 351
+ + W F F ++ D I+ L
Sbjct: 223 TRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLF 276
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 120 bits (304), Expect = 6e-32
Identities = 44/217 (20%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 105 SVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI---RKEIDIMNQ 161
+ + Y + +G G G V+ + I A K + + + + ++E +
Sbjct: 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGR 90
Query: 162 LHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTS 221
L P ++ +HD E D ++ + ++G +L + ++ + + + Q
Sbjct: 91 LQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRR-QGPLAPPRAVAI-----VRQIG 144
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST--GTAEFA 279
A+ H H DVKPENI+ + ++DFG+A+ ++ ++ GT +
Sbjct: 145 SALDAAHAAGATHRDVKPENILVSADD--FAYLVDFGIASATTDEKLTQLGNTVGTLYYM 202
Query: 280 APEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGEN 316
APE + D++A+ + Y L+G P+ G+
Sbjct: 203 APERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 121 bits (306), Expect = 6e-32
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 25/262 (9%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDI-MNQLHHP 165
D + + E+G GA+GVV + R +G I A K I + N ++ + + ++DI M + P
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGG--ELFERITAPDYKMSEAEVIPVTLPILMTQTSPA 223
+ + A + ++ + E + + ++++ + E + + + I+ A
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK-----A 165
Query: 224 VKHMHEK-NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPE 282
++H+H K ++IH DVKP N++ VKM DFG++ L + I G + APE
Sbjct: 166 LEHLHSKLSVIHRDVKPSNVLINALG--QVKMCDFGISGYLVDSVAKTIDAGCKPYMAPE 223
Query: 283 -IVEREPVGFYT---DMWAVGVLAYVLLSGLSPFAG-ENDVETLKNVKACDWE---FDEE 334
I Y+ D+W++G+ L P+ + LK V + +
Sbjct: 224 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV--VEEPSPQLPAD 281
Query: 335 AFKNVSEEGKDFIRRLLLRNKE 356
F S E DF + L +N +
Sbjct: 282 KF---SAEFVDFTSQCLKKNSK 300
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 120 bits (302), Expect = 2e-31
Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 65/287 (22%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE------LIRKEIDIMNQ 161
+ Y L+++G G + V++ + + T N+ A K I LE E IR E+ ++
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI----RLEHEEGAPCTAIR-EVSLLKD 56
Query: 162 LHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTS 221
L H ++ LHD + + L+FE+L +L + + ++ V + + Q
Sbjct: 57 LKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNV-----KLFLFQLL 110
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA-TKLDP-----NEVVKISTGT 275
+ + H + ++H D+KP+N++ +K+ DFGLA K P NEVV T
Sbjct: 111 RGLAYCHRQKVLHRDLKPQNLLI--NERGELKLADFGLARAKSIPTKTYDNEVV-----T 163
Query: 276 AEFAAPEIV--EREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETL--------- 321
+ P+I+ + Y+ DMW VG + Y + +G F G E L
Sbjct: 164 LWYRPPDILLGSTD----YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGT 219
Query: 322 ---------------KNVKACDWEFD--EEAFKNVSEEGKDFIRRLL 351
K + + + +G D + +LL
Sbjct: 220 PTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLL 266
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 118 bits (299), Expect = 3e-31
Identities = 63/287 (21%), Positives = 128/287 (44%), Gaps = 64/287 (22%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQL 162
+++ +E+IG G +GVV++ R + TG + A K I + E E IR EI ++ +L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIR-EISLLKEL 59
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSG--GELFERITAPDYKMSEAEVIPVTLPILMTQT 220
+HP ++ L D ++++ L+FEFL + + + + + Q
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS--ALTGIPLPLI-----KSYLFQL 112
Query: 221 SPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA-TKLDP-----NEVVKISTG 274
+ H ++H D+KP+N++ T +K+ DFGLA P +EVV
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVV----- 165
Query: 275 TAEFAAPEIV--EREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETLKNV-KAC- 327
T + APEI+ + Y+ D+W++G + +++ + F G+++++ L + +
Sbjct: 166 TLWYRAPEILLGAKY----YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 328 --------------DWEFD---------EEAFKNVSEEGKDFIRRLL 351
D++ + + E+G+ + ++L
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 116 bits (293), Expect = 2e-30
Identities = 64/286 (22%), Positives = 118/286 (41%), Gaps = 62/286 (21%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQL 162
Y+ LE+IG G +G V + + R+T I A K + + + E +R EI ++ +L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSSALR-EICLLKEL 58
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSP 222
H ++ LHD D ++ L+FEF +L + + + + V + Q
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIV-----KSFLFQLLK 112
Query: 223 AVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA-TKLDP-----NEVVKISTGTA 276
+ H +N++H D+KP+N++ +K+ +FGLA P EVV T
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCYSAEVV-----TL 165
Query: 277 EFAAPEIV--EREPVGFYT---DMWAVGVLAYVLLSGLSP-FAGENDVETLKNV-KAC-- 327
+ P+++ + Y+ DMW+ G + L + P F G + + LK + +
Sbjct: 166 WYRPPDVLFGAKL----YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221
Query: 328 ----DW----------EFD--------EEAFKNVSEEGKDFIRRLL 351
W + ++ G+D ++ LL
Sbjct: 222 PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLL 267
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 116 bits (293), Expect = 2e-30
Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 26/260 (10%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK-ELIRKEIDI-MNQLHHP 165
+ + L E+G+G G V + R RKTG++ A K + S N E+ + I ++D+ + P
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVK 225
++ F + ++ + E + + + E + +T+ I+ A+
Sbjct: 85 YIVQCFGTFITNTDVFIAMELMGTC-AEKLKKRMQGPIPERILGKMTVAIVK-----ALY 138
Query: 226 HMHEK-NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIV 284
++ EK +IH DVKP NI+ R +K+ DFG++ +L ++ S G A + APE +
Sbjct: 139 YLKEKHGVIHRDVKPSNILLDERG--QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 285 EREPV--GFYT---DMWAVGVLAYVLLSGLSPFAG-ENDVETLKNVKACDWE----FDEE 334
+ Y D+W++G+ L +G P+ + D E L V E
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV--LQEEPPLLPGHM 254
Query: 335 AFKNVSEEGKDFIRRLLLRN 354
F S + + F++ L ++
Sbjct: 255 GF---SGDFQSFVKDCLTKD 271
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 116 bits (294), Expect = 3e-30
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 42/235 (17%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQL 162
D Y + ++G G +G V++ + T A K I + H E+E IR E+ ++ +L
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH--EEEGVPGTAIR-EVSLLKEL 90
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSG--GELFERITAPDYKMSEAEVIPVTLPILMTQT 220
H +I L + + LIFE+ + ++ +S + + Q
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNP----DVSMRVI-----KSFLYQL 141
Query: 221 SPAVKHMHEKNIIHLDVKPENI---MCQTRNSTNVKMIDFGLA-TKLDP-----NEVVKI 271
V H + +H D+KP+N+ + + +K+ DFGLA P +E++
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-- 199
Query: 272 STGTAEFAAPEIV--EREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETL 321
T + PEI+ R Y+ D+W++ + +L F G+++++ L
Sbjct: 200 ---TLWYRPPEILLGSRH----YSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL 247
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 116 bits (293), Expect = 3e-30
Identities = 60/270 (22%), Positives = 114/270 (42%), Gaps = 41/270 (15%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNL-EKELIRKEIDI-MNQLHHP 165
+ L EIG GA+G V++ + +G I A K I + + E++ + ++D+ M P
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGG---ELFERITAPDYKMSEAEVIPVTLPILMTQTSP 222
++ + A + + + E +S + D + E + +TL +
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK----- 136
Query: 223 AVKHMHEK-NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST-GTAEFAA 280
A+ H+ E IIH D+KP NI+ N+K+ DFG++ +L + + K G + A
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSG--NIKLCDFGISGQLV-DSIAKTRDAGCRPYMA 193
Query: 281 PEIVEREPVGF-YT---DMWAVGVLAYVLLSGLSPFAG------------ENDVETLKNV 324
PE ++ Y D+W++G+ Y L +G P+ + D L N
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS 253
Query: 325 KACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+ ++ S +F+ L ++
Sbjct: 254 EEREF----------SPSFINFVNLCLTKD 273
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 116 bits (292), Expect = 4e-30
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 34/231 (14%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE------LIRKEIDIMNQ 161
+ LE++G G + V++ + TG A K + L+ E IR EI +M +
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV----KLDSEEGTPSTAIR-EISLMKE 59
Query: 162 LHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTS 221
L H ++ L+D ++++ L+FEF+ +L + + + + + + Q
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA-TKLDP-----NEVVKISTGT 275
+ HE I+H D+KP+N++ R +K+ DFGLA P +EVV T
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRG--QLKLGDFGLARAFGIPVNTFSSEVV-----T 171
Query: 276 AEFAAPEIV--EREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETL 321
+ AP+++ R Y+ D+W+ G + +++G F G ND E L
Sbjct: 172 LWYRAPDVLMGSRT----YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL 218
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 114 bits (287), Expect = 2e-29
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI---RKEIDIMNQLHHPK 166
Y++ E +G G VH R+ + A K + + R+E L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 167 LINLHDAFEDDDEMV----LIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSP 222
++ ++D E + ++ E++ G L + + + M+ I V
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQ----- 127
Query: 223 AVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST----GTAEF 278
A+ H+ IIH DVKP NIM N VK++DFG+A + + T GTA++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATN--AVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 279 AAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDV 318
+PE + V +D++++G + Y +L+G PF G++ V
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 112 bits (284), Expect = 4e-29
Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 62/285 (21%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQL 162
+ Y LE+IG G +GVV++ + G FA K I + E E IR EI I+ +L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEK--EDEGIPSTTIR-EISILKEL 57
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSP 222
H ++ L+D +VL+FE L +L + + + + + Q
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTA-----KSFLLQLLN 111
Query: 223 AVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA-TKLDP-----NEVVKISTGTA 276
+ + H++ ++H D+KP+N++ +K+ DFGLA P +E+V T
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIV-----TL 164
Query: 277 EFAAPEIV--EREPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVETLKNV-KAC--- 327
+ AP+++ ++ Y+ D+W+VG + +++G F G ++ + L + +
Sbjct: 165 WYRAPDVLMGSKK----YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTP 220
Query: 328 ------------DWEFD---------EEAFKNVSEEGKDFIRRLL 351
++ + E K + E G D + ++L
Sbjct: 221 NSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 115 bits (289), Expect = 5e-29
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 26/225 (11%)
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK--ELIRKEIDIMNQL----- 162
Y++L+ IG G+FG V + + K A K + N ++ +EI I+ L
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMV---RNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 163 ---HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYK-MSEAEVIPVTLPILMT 218
+ +I++ + F + + + FE LS L+E I ++ S V IL
Sbjct: 156 DNTMN--VIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQ- 211
Query: 219 QTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF 278
+ +H+ IIH D+KPENI+ + + + +K+IDFG + I + F
Sbjct: 212 ----CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQS---RF 264
Query: 279 -AAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLK 322
APE++ G DMW++G + LL+G GE++ + L
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA 309
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 112 bits (283), Expect = 7e-29
Identities = 46/227 (20%), Positives = 92/227 (40%), Gaps = 28/227 (12%)
Query: 107 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHH 164
++ +I E IG G FG V+ R A + I + + E +L ++E+ Q H
Sbjct: 32 FEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 165 PKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAV 224
++ A + +I G L+ + + + + + +
Sbjct: 89 ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR-----QIAQEIVKGM 143
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLAT------KLDPNEVVKISTGTAEF 278
++H K I+H D+K +N+ ++ V + DFGL + + ++I G
Sbjct: 144 GYLHAKGILHKDLKSKNVFY---DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCH 200
Query: 279 AAPEIV---------EREPVGFYTDMWAVGVLAYVLLSGLSPFAGEN 316
APEI+ ++ P ++D++A+G + Y L + PF +
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 112 bits (282), Expect = 1e-28
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 63/286 (22%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQL 162
+ Y LE++G G +GVV++ ++ G I A K I + E E IR EI ++ +L
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA--EDEGIPSTAIR-EISLLKEL 76
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSP 222
HHP +++L D + + L+FEF+ +L + + + ++++ I + Q
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQI-----KIYLYQLLR 130
Query: 223 AVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA-TKLDP-----NEVVKISTGTA 276
V H H+ I+H D+KP+N++ + +K+ DFGLA P +EVV T
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDG--ALKLADFGLARAFGIPVRSYTHEVV-----TL 183
Query: 277 EFAAPEIV--EREPVGFYT---DMWAVGVLAYVLLSGLSPFAGEND-------------- 317
+ AP+++ ++ Y+ D+W++G + +++G F G D
Sbjct: 184 WYRAPDVLMGSKK----YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 318 -------VETLKNVKACD---WEFD--EEAFKNVSEEGKDFIRRLL 351
V+ L K +E +EG D + +L
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNML 285
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 111 bits (280), Expect = 2e-28
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 107 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHH 164
+ +I E+IG G+FG VHR G+ A K + + + +E+ IM +L H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 165 PKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAV 224
P ++ A + ++ E+LS G L+ + + ++ + + +
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE---QLDERRRLSMAYDVAKGM 150
Query: 225 KHMHEKN--IIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIS-TGTAEFAAP 281
++H +N I+H ++K N++ + VK+ DFGL+ + S GT E+ AP
Sbjct: 151 NYLHNRNPPIVHRNLKSPNLLVDKKY--TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAP 208
Query: 282 EIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAG 314
E++ EP +D+++ GV+ + L + P+
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 110 bits (276), Expect = 5e-28
Identities = 50/216 (23%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEIDIMNQLHHPKLIN 169
+ + IG+G+FG V++ + A K + V+ ++L + E+ ++ + H ++
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 170 LHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHE 229
++ ++ ++ G L+ + A + K ++I + QT+ + ++H
Sbjct: 85 FMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLI-----DIARQTARGMDYLHA 138
Query: 230 KNIIHLDVKPENIMCQTRNSTNVKMIDFGLAT---KLDPNEVVKISTGTAEFAAPEIVER 286
K+IIH D+K NI N VK+ DFGLAT + + + +G+ + APE++
Sbjct: 139 KSIIHRDLKSNNIFLHEDN--TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 287 EPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVE 319
+ Y+ D++A G++ Y L++G P++ N+ +
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 108 bits (273), Expect = 2e-27
Identities = 61/288 (21%), Positives = 110/288 (38%), Gaps = 59/288 (20%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL------IRKEIDIMNQ 161
Y+ + EIG GA+G V++ R+ +G+ A K + V + +R E+ ++ +
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR-EVALLRR 67
Query: 162 LH---HPKLINLHDAF-----EDDDEMVLIFEFLSG--GELFERITAPDYKMSEAEVIPV 211
L HP ++ L D + + ++ L+FE + ++ P + +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPP--GLPAETI--- 122
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDP-----N 266
LM Q + +H I+H D+KPENI+ + VK+ DFGLA
Sbjct: 123 --KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG--TVKLADFGLARIYSYQMALTP 178
Query: 267 EVVKISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNV-K 325
VV T + APE++ + DMW+VG + + F G ++ + L +
Sbjct: 179 VVV-----TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 233
Query: 326 AC---------------DWEFD-------EEAFKNVSEEGKDFIRRLL 351
F + + E G + +L
Sbjct: 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEML 281
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 109 bits (274), Expect = 2e-27
Identities = 64/292 (21%), Positives = 110/292 (37%), Gaps = 67/292 (22%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI-PVSHNLEKELIRKEIDIMNQL-H 163
D Y ++ ++G G + V K + PV +K++ R EI I+ L
Sbjct: 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKR-EIKILENLRG 89
Query: 164 HPKLINLHDAFEDDDEM--VLIFEFLSGGEL---FERITAPDYKMSEAEVIPVTLPILMT 218
P +I L D +D L+FE ++ + ++ +T D + M
Sbjct: 90 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF------------YMY 137
Query: 219 QTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF 278
+ A+ + H I+H DVKP N+M + +++ID+GLA P + + + F
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 279 AAPEIVEREPVGF--YT---DMWAVGVLAYVLLSGLSP-FAGENDV-------------- 318
PE++ V + Y DMW++G + ++ P F G ++
Sbjct: 197 KGPELL----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 252
Query: 319 -----------------ETLKNVKACDWE--FDEEAFKNVSEEGKDFIRRLL 351
+ L WE E VS E DF+ +LL
Sbjct: 253 LYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 304
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 108 bits (271), Expect = 2e-27
Identities = 50/222 (22%), Positives = 101/222 (45%), Gaps = 23/222 (10%)
Query: 107 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI-------RKEIDIM 159
+ + ++IG G FG+VH+ R K ++ A K + + + + + ++E+ IM
Sbjct: 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 160 NQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQ 219
+ L+HP ++ L+ + ++ EF+ G+L+ R+ + + + + LM
Sbjct: 78 SNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL-----RLMLD 130
Query: 220 TSPAVKHMHEKN--IIHLDVKPENI---MCQTRNSTNVKMIDFGLATKLDPNEVVKISTG 274
+ +++M +N I+H D++ NI K+ DFGL+ + V G
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS--VHSVSGLLG 188
Query: 275 TAEFAAPEI--VEREPVGFYTDMWAVGVLAYVLLSGLSPFAG 314
++ APE E E D ++ ++ Y +L+G PF
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 109 bits (274), Expect = 5e-27
Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 64/286 (22%)
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLIN 169
Y + IG G+FGVV++ + +G + A K + +K +E+ IM +L H ++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 111
Query: 170 LHDAF------EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPA 223
L F +D+ + L+ +++ ++ Y ++ + + + + M Q +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYV-PETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 224 VKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFA---- 279
+ ++H I H D+KP+N++ ++ +K+ DFG A +L E +
Sbjct: 169 LAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPN-----VSYICSRYY 222
Query: 280 -APEIVEREPVGF--YT---DMWAVG-VLAYVLLSGLSPFAGENDVETLK---------- 322
APE++ G YT D+W+ G VLA LL G F G++ V+ L
Sbjct: 223 RAPELI----FGATDYTSSIDVWSAGCVLAE-LLLGQPIFPGDSGVDQLVEIIKVLGTPT 277
Query: 323 -----------------NVKACDWEFDEEAFKNVSEEGKDFIRRLL 351
+KA W + E RLL
Sbjct: 278 REQIREMNPNYTEFKFPQIKAHPWT--KVFRPRTPPEAIALCSRLL 321
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 108 bits (271), Expect = 6e-27
Identities = 59/254 (23%), Positives = 103/254 (40%), Gaps = 41/254 (16%)
Query: 92 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKE- 150
+K V Y+ L +IG G FG V + R RKTG A K + + + EKE
Sbjct: 2 AKQYDSVECPFCDEV-SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEG 58
Query: 151 ----LIRKEIDIMNQLHHPKLINLHD--------AFEDDDEMVLIFEFLSGGELFERITA 198
+R EI I+ L H ++NL + + L+F+F +L ++
Sbjct: 59 FPITALR-EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSN 116
Query: 199 PDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFG 258
K + +E+ +M + ++H I+H D+K N++ +K+ DFG
Sbjct: 117 VLVKFTLSEI-----KRVMQMLLNGLYYIHRNKILHRDMKAANVL--ITRDGVLKLADFG 169
Query: 259 LATKLDPNEVVKISTGTAE-----FAAPEIV--EREPVGFYT---DMWAVG-VLAYVLLS 307
LA + + + T + PE++ ER+ Y D+W G ++A + +
Sbjct: 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERD----YGPPIDLWGAGCIMAE-MWT 224
Query: 308 GLSPFAGENDVETL 321
G + L
Sbjct: 225 RSPIMQGNTEQHQL 238
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 105 bits (265), Expect = 2e-26
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 107 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPK 166
Y ++ E +G GAFGVV + + R A K I E++ E+ +++++HP
Sbjct: 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQI--ESESERKAFIVELRQLSRVNHPN 62
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERI--TAPDYKMSEAEVIPVTLPILMTQTSPAV 224
++ L+ A + + L+ E+ GG L+ + P + A + Q S V
Sbjct: 63 IVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM-----SWCLQCSQGV 115
Query: 225 KHMHE---KNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAP 281
++H K +IH D+KP N++ T +K+ DFG A + + + G+A + AP
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLL-LVAGGTVLKICDFGTACDI--QTHMTNNKGSAAWMAP 172
Query: 282 EIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAG 314
E+ E D+++ G++ + +++ PF
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 105 bits (263), Expect = 2e-26
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 25/222 (11%)
Query: 107 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI----RKEIDIMNQL 162
+ + E IG G FG V+R G+ A K + + R+E + L
Sbjct: 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM-TQTS 221
HP +I L + + L+ EF GG L ++ IP + + Q +
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR--------IPPDILVNWAVQIA 115
Query: 222 PAVKHMHEKN---IIHLDVKPENI------MCQTRNSTNVKMIDFGLATKLDPNEVVKIS 272
+ ++H++ IIH D+K NI ++ +K+ DFGLA + +
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-REWHRTTKMSA 174
Query: 273 TGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAG 314
G + APE++ +D+W+ GVL + LL+G PF G
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 105 bits (265), Expect = 2e-26
Identities = 46/223 (20%), Positives = 85/223 (38%), Gaps = 28/223 (12%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
E +G G FG + R+TG + K + + KE+ +M L HP ++
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 172 DAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKN 231
D + I E++ GG L I + D + ++ + + + ++H N
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRV-----SFAKDIASGMAYLHSMN 128
Query: 232 IIHLDVKPENIMCQTRNSTNVKMIDFGLA---------------TKLDPNEVVKISTGTA 276
IIH D+ N + R + NV + DFGLA K + G
Sbjct: 129 IIHRDLNSHNCL--VRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 277 EFAAPEIVEREPVGFYT---DMWAVGVLAYVLLSGLSPFAGEN 316
+ APE++ Y D+++ G++ ++ ++
Sbjct: 187 YWMAPEMINGRS---YDEKVDVFSFGIVLCEIIGRVNADPDYL 226
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 106 bits (267), Expect = 4e-26
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK--ELIRKEIDIMNQL--- 162
D Y+I IG G+FG V + +R A K I N + + E+ ++ +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII---KNKKAFLNQAQIEVRLLELMNKH 110
Query: 163 -----HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYK-MSEAEVIPVTLPIL 216
++ +++L F + + L+FE LS L++ + +++ +S +
Sbjct: 111 DTEMKYY--IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMC 167
Query: 217 MTQTSPAVKHMHEK--NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTG 274
A+ + +IIH D+KPENI+ + +K++DFG + +L I +
Sbjct: 168 T-----ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQS- 221
Query: 275 TAEF-AAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLK 322
F +PE++ P DMW++G + + +G F+G N+V+ +
Sbjct: 222 --RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 268
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 104 bits (262), Expect = 6e-26
Identities = 50/216 (23%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELI--RKEIDIMNQLHHPKLIN 169
+ IG+G+FG V++ + A K + V ++ R E+ ++ + H ++
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILL 96
Query: 170 LHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHE 229
D + ++ ++ G L++ + + K ++I + QT+ + ++H
Sbjct: 97 FMGYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLI-----DIARQTAQGMDYLHA 150
Query: 230 KNIIHLDVKPENIMCQTRNSTNVKMIDFGLAT---KLDPNEVVKISTGTAEFAAPEIVER 286
KNIIH D+K NI VK+ DFGLAT + ++ V+ TG+ + APE++
Sbjct: 151 KNIIHRDMKSNNIFLHEGL--TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 287 EPVGFYT---DMWAVGVLAYVLLSGLSPFAGENDVE 319
+ ++ D+++ G++ Y L++G P++ N+ +
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 101 bits (255), Expect = 3e-25
Identities = 31/218 (14%), Positives = 77/218 (35%), Gaps = 23/218 (10%)
Query: 107 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL--IRKEIDIMNQLHH 164
+ + L ++ G + + R + GN K + V ++ +E + H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 165 PKLINLHDAFED--DDEMVLIFEFLSGGELFERI-TAPDYKMSEAEVIPVTLPILMTQTS 221
P ++ + A + LI ++ G L+ + ++ + +++ + +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAV-----KFALDMA 121
Query: 222 PAVKHMHEKN--IIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFA 279
+ +H I + ++M ++ + + +
Sbjct: 122 RGMAFLHTLEPLIPRHALNSRSVMIDEDM--TARISMADVKF----SFQSPGRMYAPAWV 175
Query: 280 APEIVEREPVGFYT---DMWAVGVLAYVLLSGLSPFAG 314
APE ++++P DMW+ VL + L++ PFA
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 103 bits (259), Expect = 4e-25
Identities = 63/289 (21%), Positives = 116/289 (40%), Gaps = 67/289 (23%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
Y + IG G+FGVV + + ++ + A K + +K +E+ IM + HP +
Sbjct: 40 IAYTNCKVIGNGSFGVVFQAKLVESDEV-AIKKVL----QDKRFKNRELQIMRIVKHPNV 94
Query: 168 INLHDAF------EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTS 221
++L F +D+ + L+ E++ ++ Y + + + + + M Q
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYV-PETVYRASR--HYAKLKQTMPMLLIKLYMYQLL 151
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFA-- 279
++ ++H I H D+KP+N++ S +K+IDFG A L E +
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLL-DPPSGVLKLIDFGSAKILIAGE-----PNVSYICSR 205
Query: 280 ---APEIVEREPVGF--YT---DMWAVG-VLAYVLLSGLSPFAGENDVETLK-------- 322
APE++ G YT D+W+ G V+A L+ G F GE+ ++ L
Sbjct: 206 YYRAPELI----FGATNYTTNIDIWSTGCVMAE-LMQGQPLFPGESGIDQLVEIIKVLGT 260
Query: 323 -------------------NVKACDWEFDEEAF-KNVSEEGKDFIRRLL 351
++ + + F + D I RLL
Sbjct: 261 PSREQIKTMNPNYMEHKFPQIRPHPF---SKVFRPRTPPDAIDLISRLL 306
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 102 bits (256), Expect = 6e-25
Identities = 64/288 (22%), Positives = 115/288 (39%), Gaps = 61/288 (21%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERK-TGNIFAAKFIPVSHNLEKE-----LIRKEIDIMNQ 161
Y+ + EIG GA+G V + R+ K G A K + V +E IR E+ ++
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIR-EVAVLRH 67
Query: 162 LH---HPKLINLHDAF-----EDDDEMVLIFEFLSG--GELFERITAPDYKMSEAEVIPV 211
L HP ++ L D + + ++ L+FE + +++ P + +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP--GVPTETI--- 122
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA-TKLDP----N 266
+M Q + +H ++H D+KP+NI+ + +K+ DFGLA +
Sbjct: 123 --KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMALTS 178
Query: 267 EVVKISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNV-K 325
VV T + APE++ + D+W+VG + + F G +DV+ L +
Sbjct: 179 VVV-----TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
Query: 326 AC---------------DWEFD-------EEAFKNVSEEGKDFIRRLL 351
F E+ ++ E GKD + + L
Sbjct: 234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCL 281
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 103 bits (258), Expect = 7e-25
Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 36/256 (14%)
Query: 97 QPVDIKTSSVYDHYDIL-EEIGTGAFGVVHRCRER--KTGNIFAAKFIPVSHNLEKELIR 153
+ + V D ++ ++G G +G V++ + + K +A K I + R
Sbjct: 9 VKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE-GTGISMSACR 67
Query: 154 KEIDIMNQLHHPKLINLHDAFED--DDEMVLIFEFLSG--GELFERITAPDYKMSEAEVI 209
EI ++ +L HP +I+L F D ++ L+F++ + + A ++
Sbjct: 68 -EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLP 126
Query: 210 PVTLPILMTQTSPAVKHMHEKNIIHLDVKPEN--IMCQTRNSTNVKMIDFGLA------- 260
+ L+ Q + ++H ++H D+KP N +M + VK+ D G A
Sbjct: 127 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 186
Query: 261 ---TKLDPNEVVKISTGTAEFAAPEIV--EREPVGFYT---DMWAVGVLAYVLLSGLSPF 312
LDP VV T + APE++ R YT D+WA+G + LL+ F
Sbjct: 187 KPLADLDP-VVV-----TFWYRAPELLLGARH----YTKAIDIWAIGCIFAELLTSEPIF 236
Query: 313 AGENDVETLKNVKACD 328
+ N D
Sbjct: 237 HCRQEDIKTSNPYHHD 252
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 100 bits (252), Expect = 9e-25
Identities = 27/217 (12%), Positives = 51/217 (23%), Gaps = 39/217 (17%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNL---EKELIRKEIDIMNQLHH 164
Y +L G + + A F+ L + ++++
Sbjct: 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK 90
Query: 165 PKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAV 224
P + + D +++ E++ GG L E S I + A
Sbjct: 91 PGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAA-----AA 142
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFAAPEIV 284
H + P + +V + +P
Sbjct: 143 DAAHRAGVALSIDHPSRVR--VSIDGDVVLAYPATMPDANP------------------- 181
Query: 285 EREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETL 321
D+ +G Y LL P L
Sbjct: 182 -------QDDIRGIGASLYALLVNRWPLPEAGVRSGL 211
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 101 bits (254), Expect = 2e-24
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 34/237 (14%)
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLH------ 163
Y ++ ++G G F V ++ A K + + E EI ++ +++
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 164 -----HPKLINLHDAFE----DDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLP 214
++ L D F + +V++FE L G L I +++ + L
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHR-------GIPLI 131
Query: 215 IL---MTQTSPAVKHMHEK-NIIHLDVKPENIM----CQTRNSTNVKMIDFGLATKLDPN 266
+ Q + +MH + IIH D+KPEN++ N +K+ D G A D +
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 267 EVVKISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKN 323
I T E+ +PE++ P G D+W+ L + L++G F + K+
Sbjct: 192 YTNSIQ--TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 100 bits (251), Expect = 1e-23
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 21/259 (8%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQLH 163
V Y L+ IG+GA G+V + A K + P + + +E+ +M ++
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 164 HPKLINLHDAF------EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM 217
H +I+L + F E+ ++ L+ E + L ++ + E+ + L+
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL--------CQVIQMELDHERMSYLL 170
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKLDPNEVVKISTGTA 276
Q +KH+H IIH D+KP NI+ S +K++DFGLA + ++ T
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 277 EFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAF 336
+ APE++ D+W+VG + ++ F G + ++ V E
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 287
Query: 337 KNVSEEGKDFIRRLLLRNK 355
K + ++++
Sbjct: 288 KKLQPTVRNYVENRPKYAG 306
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 95.8 bits (239), Expect = 1e-22
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 44/243 (18%)
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAA-KFIPVSHNLEK--ELIRKEIDIMNQL---- 162
Y+I++ +G GAFG V C + K G A K + N+++ E R EI ++ L
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHLNTTD 72
Query: 163 ----HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYK-MSEAEVIPVTLPILM 217
+ + + FE + ++FE L G ++ I + + + I
Sbjct: 73 PNSTFR--CVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIM-----------------CQTRNSTNVKMIDFGLA 260
+V +H + H D+KPENI+ +T + ++K++DFG A
Sbjct: 130 -----SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 261 TKLDPNEVVKISTGTAEF-AAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVE 319
T D + +ST APE++ D+W++G + G + F + E
Sbjct: 185 TYDDEHHSTLVSTR---HYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241
Query: 320 TLK 322
L
Sbjct: 242 HLA 244
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 96.3 bits (240), Expect = 1e-22
Identities = 55/258 (21%), Positives = 108/258 (41%), Gaps = 19/258 (7%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQLH 163
V Y L+ IG+GA G+V + A K + P + + +E+ +M ++
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 164 HPKLINLHDAF------EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM 217
H +I L + F E+ ++ ++ E + L ++ + E+ + L+
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL--------CQVIQMELDHERMSYLL 133
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAE 277
Q +KH+H IIH D+KP NI+ ++ +K++DFGLA + ++ T
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIV--VKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 191
Query: 278 FAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACDWEFDEEAFK 337
+ APE++ D+W+VG + ++ G F G + ++ V E K
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251
Query: 338 NVSEEGKDFIRRLLLRNK 355
+ + ++
Sbjct: 252 KLQPTVRTYVENRPKYAG 269
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 95.1 bits (237), Expect = 3e-22
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 44/243 (18%)
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAA-KFIPVSHNLEK--ELIRKEIDIMNQL---- 162
Y+I+ +G G FG V C + G A K I N+ K E R EI+++ ++
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKII---RNVGKYREAARLEINVLKKIKEKD 77
Query: 163 ----HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYK-MSEAEVIPVTLPILM 217
+ + D F M + FE L G FE + +++ V + +
Sbjct: 78 KENKFL--CVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCH 134
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIM-----------------CQTRNSTNVKMIDFGLA 260
A++ +HE + H D+KPENI+ ++ +T++++ DFG A
Sbjct: 135 -----ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189
Query: 261 TKLDPNEVVKISTGTAEF-AAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVE 319
T + ++T PE++ D+W++G + + G + F + E
Sbjct: 190 TFDHEHHTTIVATR---HYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
Query: 320 TLK 322
L
Sbjct: 247 HLV 249
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 94.6 bits (236), Expect = 3e-22
Identities = 56/275 (20%), Positives = 115/275 (41%), Gaps = 40/275 (14%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 165
+ Y L+ +G G G+V + A K I ++ + +EI I+ +L H
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHD 68
Query: 166 KLINLHDAF--------------EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPV 211
++ + + + + + ++ E++ +L + + E
Sbjct: 69 NIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGP--LLEEHA--- 122
Query: 212 TLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTN--VKMIDFGLATKLDPNEVV 269
+ M Q +K++H N++H D+KP N+ N+ + +K+ DFGLA +DP+
Sbjct: 123 --RLFMYQLLRGLKYIHSANVLHRDLKPANLFI---NTEDLVLKIGDFGLARIMDPHYSH 177
Query: 270 KIS-TG---TAEFAAPEIVEREPVGF--YT---DMWAVGVLAYVLLSGLSPFAGENDVET 320
K + T + +P ++ + YT DMWA G + +L+G + FAG +++E
Sbjct: 178 KGHLSEGLVTKWYRSPRLL----LSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ 233
Query: 321 LKNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRNK 355
++ + EE + + +IR +
Sbjct: 234 MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPH 268
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 93.9 bits (234), Expect = 9e-22
Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 74/301 (24%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI-PVSHNLEKELIRKEIDIMNQLHH 164
+ + + +G GA+GVV + TG I A K I P L +EI I+ H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 165 PKLINLHDAF-----EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQ 219
+I + + E+ +E+ +I E + +L I+ +S+ + + Q
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQM--LSDDHI-----QYFIYQ 120
Query: 220 TSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKLDPNEVVKISTGTAEF 278
T AVK +H N+IH D+KP N++ NS ++K+ DFGLA +D + +
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 279 A-----------APEIVEREPVGF--YT---DMWAVG-VLAYVLLSGLSPFAG------- 314
APE++ + Y+ D+W+ G +LA L F G
Sbjct: 178 GMVEFVATRWYRAPEVM----LTSAKYSRAMDVWSCGCILAE-LFLRRPIFPGRDYRHQL 232
Query: 315 ------------ENDVETLKNVKA------------CDWEFDEEAFKNVSEEGKDFIRRL 350
+ND+ +++ +A E+ F V+ +G D ++R+
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL---EKMFPRVNPKGIDLLQRM 289
Query: 351 L 351
L
Sbjct: 290 L 290
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 94.5 bits (235), Expect = 2e-21
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
+ ++G G +G V+ +K A K + +E + KE +M ++ HP L+ L
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLL 282
Query: 172 DAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILM-TQTSPAVKHMHE 229
+ +I EF++ G L DY + + + + + M TQ S A++++ +
Sbjct: 283 GVCTREPPFYIITEFMTYGNLL------DYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336
Query: 230 KNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGT--AEFAAPEIVERE 287
KN IH ++ N + + VK+ DFGL+ + + + ++ APE +
Sbjct: 337 KNFIHRNLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 394
Query: 288 PVGFYTDMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
+D+WA GVL + + + G+SP+ G + + + ++
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 433
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 93.2 bits (232), Expect = 2e-21
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 48/247 (19%)
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEK--ELIRKEIDIMNQL----- 162
+ ++ ++G G FG V C+ +A K + N++K + E DI+ ++
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV---RNIKKYTRSAKIEADILKKIQNDDI 93
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPIL---MTQ 219
++ ++ H F D M LIFE L G L+E IT +Y + + +
Sbjct: 94 NNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYN-------GFHIEDIKLYCIE 145
Query: 220 TSPAVKHMHEKNIIHLDVKPENIM-----------------------CQTRNSTNVKMID 256
A+ ++ + ++ H D+KPENI+ ST +K+ID
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLID 205
Query: 257 FGLATKLDPNEVVKISTGTAEF-AAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGE 315
FG AT I+T APE++ +DMW+ G + L +G F
Sbjct: 206 FGCATFKSDYHGSIINT---RQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262
Query: 316 NDVETLK 322
+E L
Sbjct: 263 EHMEHLA 269
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 92.7 bits (231), Expect = 2e-21
Identities = 67/311 (21%), Positives = 114/311 (36%), Gaps = 69/311 (22%)
Query: 92 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL 151
S D ++ D + + G G FG V +E+ TG A K +
Sbjct: 7 SLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE 66
Query: 152 IRKEIDIMNQLHHPKLINLHDAF-----EDDDEM--VLIFEFLSGGELFERITAPDYKMS 204
++ + + LHHP ++ L F D ++ ++ E++ L Y
Sbjct: 67 LQ-IMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV-PDTLHRCCRN--YYRR 122
Query: 205 EAEVIPVTLPILMTQTSPAVKHMHEK--NIIHLDVKPENIMCQTRNSTN--VKMIDFGLA 260
+ P+ + + + Q ++ +H N+ H D+KP N++ N + +K+ DFG A
Sbjct: 123 QVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV---NEADGTLKLCDFGSA 179
Query: 261 TKLDPNEVVKISTGTAEFA-----APEIVEREPVGF--YT---DMWAVG-VLAYVLLSGL 309
KL P+E A APE++ G YT D+W+VG + A ++ G
Sbjct: 180 KKLSPSE-----PNVAYICSRYYRAPELI----FGNQHYTTAVDIWSVGCIFAE-MMLGE 229
Query: 310 SPFAGENDV---------------------------ETLKNVKACDWE--FDEEAFKNVS 340
F G+N L N K W F + +
Sbjct: 230 PIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVF-SDHSLKDA 288
Query: 341 EEGKDFIRRLL 351
+E D + LL
Sbjct: 289 KEAYDLLSALL 299
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 92.1 bits (229), Expect = 5e-21
Identities = 60/261 (22%), Positives = 96/261 (36%), Gaps = 61/261 (23%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
Y + + +GTG+FG+V + ++G FA K + + +E+DIM L H +
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL----QDPRYKNRELDIMKVLDHVNI 62
Query: 168 INLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPV---------------- 211
I L D F + VI
Sbjct: 63 IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122
Query: 212 --------------TLPIL-----MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNV 252
++P+ + Q AV +H I H D+KP+N++ +
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN-SKDNTL 181
Query: 253 KMIDFGLATKLDPNEVVKISTGTAEFA-----APEIVEREPVGF--YT---DMWAVG-VL 301
K+ DFG A KL P+E A APE++ +G YT D+W++G V
Sbjct: 182 KLCDFGSAKKLIPSE-----PSVAYICSRFYRAPELM----LGATEYTPSIDLWSIGCVF 232
Query: 302 AYVLLSGLSPFAGENDVETLK 322
L+ G F+GE ++ L
Sbjct: 233 GE-LILGKPLFSGETSIDQLV 252
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 91.6 bits (228), Expect = 5e-21
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 39/268 (14%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQLH 163
+ Y +G+GA+G V ++++G A K + P + + +E+ ++ +
Sbjct: 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ 81
Query: 164 HPKLINLHDAF------EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM 217
H +I L D F + + L+ F+ +L + + SE ++ L+
Sbjct: 82 HENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGLK---FSEEKIQ-----YLV 132
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKLDPN---EVVKIST 273
Q +K++H ++H D+KP N+ N +K++DFGLA D VV
Sbjct: 133 YQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLARHADAEMTGYVV---- 185
Query: 274 GTAEFAAPEIVEREPVGF--YT---DMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACD 328
T + APE++ + + Y D+W+VG + +L+G + F G++ ++ L +
Sbjct: 186 -TRWYRAPEVI----LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 240
Query: 329 WEFDEEAFKNV-SEEGKDFIRRLLLRNK 355
E + + + K +I+ L +
Sbjct: 241 GVPGTEFVQKLNDKAAKSYIQSLPQTPR 268
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 91.7 bits (228), Expect = 8e-21
Identities = 57/263 (21%), Positives = 98/263 (37%), Gaps = 43/263 (16%)
Query: 92 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEK 149
+ IK V D+Y I IG G++G V+ ++ T A K + ++
Sbjct: 10 GRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDC 69
Query: 150 ELIRKEIDIMNQLHHPKLINLHDAF-----EDDDEMVLIFEFLSGGELFERITAPDYKMS 204
+ I +EI I+N+L +I L+D DE+ ++ E +L + P + ++
Sbjct: 70 KRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKTPIF-LT 127
Query: 205 EAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKL 263
E + ++ +HE IIH D+KP N + N +VK+ DFGLA +
Sbjct: 128 EEHIK-----TILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTI 179
Query: 264 DPNEVVKISTGTAEFAAPEIVEREPVGFYT------------------------DMWAVG 299
+ + I E P + T D+W+ G
Sbjct: 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG 239
Query: 300 -VLAYVLLSGLSPFAGENDVETL 321
+ A +L S + L
Sbjct: 240 CIFAELLNMLQSHINDPTNRFPL 262
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 89.7 bits (223), Expect = 3e-20
Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 93 KYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKE 150
+ Q ++ V + Y L +G+GA+G V + KTG A K + P + +
Sbjct: 14 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 151 LIRKEIDIMNQLHHPKLINLHDAF------EDDDEMVLIFEFLSGGELFERITAPDYKMS 204
+E+ ++ + H +I L D F E+ +++ L+ + G +L +
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDD 132
Query: 205 EAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKL 263
+ + + Q +K++H +IIH D+KP N+ N +K++DFGLA
Sbjct: 133 HVQFL-------IYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHT 182
Query: 264 DPN---EVVKISTGTAEFAAPEIVEREPVGF--YT---DMWAVGVLAYVLLSGLSPFAGE 315
V T + APEI+ + + Y D+W+VG + LL+G + F G
Sbjct: 183 ADEMTGYVA-----TRWYRAPEIM----LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
Query: 316 NDVETLKNVKACDWEFDEEAFKNV-SEEGKDFIRRLLLRNK 355
+ ++ LK + E K + SE +++I+ L K
Sbjct: 234 DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 89.7 bits (223), Expect = 3e-20
Identities = 53/313 (16%), Positives = 106/313 (33%), Gaps = 70/313 (22%)
Query: 92 SKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL 151
+ + + + ++ Y + I +G++G V + G A K + + + + +
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTV 64
Query: 152 -----------IRKEIDIMNQLHHPKLINLHDAF-----EDDDEMVLIFEFLSGGELFER 195
+ +EI ++N HHP ++ L D F ++ L+ E + +L +
Sbjct: 65 NILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQV 123
Query: 196 ITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKM 254
I +S + M + +HE ++H D+ P NI+ ++ +
Sbjct: 124 IHDQRIVISPQHIQ-----YFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADNNDITI 175
Query: 255 IDFGLATKLDPNEVVKISTGTAEFAAPEIVEREPVGF--YT---DMWAVGVLAYVLLSGL 309
DF LA + + + APE+V + F +T DMW+ G + + +
Sbjct: 176 CDFNLAREDTADANKTHYVTHRWYRAPELV----MQFKGFTKLVDMWSAGCVMAEMFNRK 231
Query: 310 SPFAGEN------------------DVETLKNVKA-------------CDWEFDEEAFKN 338
+ F G DV + A W
Sbjct: 232 ALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAW---TAVVPT 288
Query: 339 VSEEGKDFIRRLL 351
D I ++L
Sbjct: 289 ADPVALDLIAKML 301
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 88.9 bits (221), Expect = 6e-20
Identities = 69/293 (23%), Positives = 121/293 (41%), Gaps = 66/293 (22%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI-PVSHNLEKELIRKEIDIMNQLHH 164
V Y L IG GA+G+V + A K I P H + +EI I+ + H
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 84
Query: 165 PKLINLHDAF-----EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQ 219
+I ++D E ++ ++ + + +L++ + +S + + Q
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHIC-----YFLYQ 136
Query: 220 TSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKLDPNEVVKIS-TG--- 274
+K++H N++H D+KP N++ N+T ++K+ DFGLA DP+ T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 275 TAEFAAPEIVEREPVGF--YT---DMWAVG-VLAYVLLSGLSPFAGEN------------ 316
T + APEI+ + YT D+W+VG +LA +LS F G++
Sbjct: 194 TRWYRAPEIM----LNSKGYTKSIDIWSVGCILAE-MLSNRPIFPGKHYLDQLNHILGIL 248
Query: 317 ------DVETLKNVKA------------CDWEFDEEAFKNVSEEGKDFIRRLL 351
D+ + N+KA W F N + D + ++L
Sbjct: 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWN---RLFPNADSKALDLLDKML 298
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 88.7 bits (220), Expect = 1e-19
Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 49/232 (21%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIP-VSHNLE--KELIRKEIDIMNQL 162
+ D Y+I IGTG++G V ++ + A K I V +L K ++R EI I+N+L
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRL 109
Query: 163 HHPKLINLHD-----AFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM 217
+H ++ + D E DE+ ++ E + + P Y ++E + L+
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVY-LTELHI-----KTLL 162
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLA-----TKLDPNEVVKI 271
VK++H I+H D+KP N + N +VK+ DFGLA + +++
Sbjct: 163 YNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPIS 219
Query: 272 STGTAEFAAPEIVEREPVGFYT------------------------DMWAVG 299
+ T D+W++G
Sbjct: 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIG 271
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 87.0 bits (216), Expect = 1e-19
Identities = 56/244 (22%), Positives = 93/244 (38%), Gaps = 41/244 (16%)
Query: 112 ILEEIGTGAFGVVHRCR----ERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
L+++G G FG V CR + TG + A K + S +EI+I+ L H +
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 168 INLHDAFEDDDE--MVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILMTQTSPAV 224
+ + LI E+L G L DY + + + + L +Q +
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLR------DYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AA 280
+++ K IH D+ NI+ + N VK+ DFGL L ++ E A
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 281 PE-IVEREPVGFYT--DMWAVGVLAYVLLS----------------GLSPFAGENDVETL 321
PE + E + F D+W+ GV+ Y L + G +
Sbjct: 186 PESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
Query: 322 KNVK 325
+ +K
Sbjct: 243 ELLK 246
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 87.0 bits (216), Expect = 2e-19
Identities = 58/271 (21%), Positives = 95/271 (35%), Gaps = 48/271 (17%)
Query: 92 SKYVPQPVDIKTSSVYDHYDI-------LEEIGTGAFGVVHRCR----ERKTGNIFAAKF 140
Q D L+++G G FG V CR + TG + A K
Sbjct: 18 ENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKK 77
Query: 141 IPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDE--MVLIFEFLSGGELFERITA 198
+ S +EI+I+ L H ++ + LI E+L G L
Sbjct: 78 LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR----- 132
Query: 199 PDY-KMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDF 257
DY + + + + L +Q ++++ K IH D+ NI+ + N VK+ DF
Sbjct: 133 -DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR--VKIGDF 189
Query: 258 GLATKLDPNEVVKISTGTAEF----AAPE-IVEREPVGFYT--DMWAVGVLAYVLLS--- 307
GL L ++ E APE + E + F D+W+ GV+ Y L +
Sbjct: 190 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK---FSVASDVWSFGVVLYELFTYIE 246
Query: 308 -------------GLSPFAGENDVETLKNVK 325
G ++ +K
Sbjct: 247 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 86.1 bits (214), Expect = 3e-19
Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 35/232 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
++ +G+GAFG V++ G IPV S KE++ E +M +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGE---KVKIPVAIKELREATSPKANKEILD-EAYVMASV 74
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSP 222
+P + L + LI + + G L + + + L Q +
Sbjct: 75 DNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIG-----SQYLLNWCVQIAK 128
Query: 223 AVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF---- 278
+ ++ ++ ++H D+ N++ +T VK+ DFGLA L E + G +
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLGAEEKEYHAEG-GKVPIKW 185
Query: 279 AAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
A E I+ R YT D+W+ GV + L++ G P+ G E ++
Sbjct: 186 MALESILHRI----YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 86.2 bits (214), Expect = 3e-19
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 26/226 (11%)
Query: 112 ILEEIGTGAFGVVHRCR----ERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
+ ++G G FG V CR TG + A K + S ++ ++EI I+ LH +
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 168 INLHDAFEDDDE--MVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILMTQTSPAV 224
+ + L+ E+L G L D+ + A + L + +Q +
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLR------DFLQRHRARLDASRLLLYSSQICKGM 140
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AA 280
+++ + +H D+ NI+ ++ VK+ DFGLA L ++ + + A
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAH--VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 198
Query: 281 PE-IVEREPVGFYT--DMWAVGVLAYVLLS-GLSPFAGENDVETLK 322
PE + + F D+W+ GV+ Y L + + + +
Sbjct: 199 PESLSDNI---FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM 241
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 85.4 bits (212), Expect = 4e-19
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 24/224 (10%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
+ ++G G +G V+ +K A K + +E + KE +M ++ HP L+ L
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLL 75
Query: 172 DAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILM-TQTSPAVKHMHE 229
+ +I EF++ G L DY + + + + + M TQ S A++++ +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLL------DYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 230 KNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPEIVE 285
KN IH D+ N + + VK+ DFGL+ + + A+F APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLA 185
Query: 286 REPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
++ D+WA GVL + + + G+SP+ G + + + ++
Sbjct: 186 Y---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 226
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 85.9 bits (213), Expect = 4e-19
Identities = 49/235 (20%), Positives = 86/235 (36%), Gaps = 40/235 (17%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
+LE G FG V + + A K P+ + E+ + + H +
Sbjct: 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQ-NEYEVYSLPGMKHENI 80
Query: 168 INLHDA----FEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPA 223
+ A D ++ LI F G L + + A V+ L
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN----------VVSWNELCHIAETM 130
Query: 224 VK---HMHEK----------NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVK 270
+ ++HE I H D+K +N++ +N+ + DFGLA K + +
Sbjct: 131 ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVL--LKNNLTACIADFGLALKFEAGKSAG 188
Query: 271 IST---GTAEFAAPEIVEREPVGFYT-----DMWAVGVLAYVLLSGLSPFAGEND 317
+ GT + APE++E DM+A+G++ + L S + G D
Sbjct: 189 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 85.0 bits (211), Expect = 4e-19
Identities = 45/236 (19%), Positives = 85/236 (36%), Gaps = 39/236 (16%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLH 163
E +G G F + + R+ G+ V N + +M++L
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE-AASMMSKLS 70
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM-TQTSP 222
H L+ + DE +L+ EF+ G L Y I + + + Q +
Sbjct: 71 HKHLVLNYGVCVCGDENILVQEFVKFGSLD------TYLKKNKNCINILWKLEVAKQLAA 124
Query: 223 AVKHMHEKNIIHLDVKPENIM------CQTRNSTNVKMIDFGLATKLDPNEVVKIS---T 273
A+ + E +IH +V +NI+ +T N +K+ D G++ + P ++++
Sbjct: 125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWV 184
Query: 274 GTAEFAAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
PE I D W+ G + + S G P + + L+
Sbjct: 185 ------PPECIENP---KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 85.1 bits (211), Expect = 5e-19
Identities = 40/231 (17%), Positives = 82/231 (35%), Gaps = 35/231 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINL- 170
+LE +G G +G V R + G A K S + + E+ L H ++
Sbjct: 12 LLECVGKGRYGEVWRGSWQ--GENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILGFI 68
Query: 171 ---HDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHM 227
+ ++ LI + G L++ + + + ++ + + H+
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTVSCL-----RIVLSIASGLAHL 121
Query: 228 HEK--------NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVV-----KISTG 274
H + I H D+K +NI+ + + + D GLA + G
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNIL--VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 275 TAEFAAPEIVEREPVGFYT------DMWAVGVLAYVLLSGLSPFAGENDVE 319
T + APE+++ D+WA G++ + + + D +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 84.2 bits (209), Expect = 7e-19
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 24/222 (10%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
++EIG+G FG+VH + A K I E++ I E ++M +L HPKL+ L+
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLY 69
Query: 172 DAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILMTQTSPAVKHMHEK 230
+ + L+ EF+ G L DY + TL + + ++ E
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLS------DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 231 NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPEIVER 286
+IH D+ N + +K+ DFG+ + ++ S+ +F A+PE+
Sbjct: 124 CVIHRDLAARNCLVGENQV--IKVSDFGMTRFVLDDQYT--SSTGTKFPVKWASPEVFSF 179
Query: 287 EPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
Y+ D+W+ GVL + + S G P+ ++ E ++++
Sbjct: 180 ---SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 85.8 bits (213), Expect = 7e-19
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 38/268 (14%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQLH 163
V Y L+ +G+GA+G V + +TG A K + P L + +E+ ++ +
Sbjct: 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR 82
Query: 164 HPKLINLHDAF------EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM 217
H +I L D F +D + L+ F+ G +L + + K+ E + L+
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQ-----FLV 134
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKLDPN---EVVKIST 273
Q ++++H IIH D+KP N+ N +K++DFGLA + D VV
Sbjct: 135 YQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADSEMTGYVV---- 187
Query: 274 GTAEFAAPEIVEREPVGF--YT---DMWAVGVLAYVLLSGLSPFAGENDVETLKNVKACD 328
T + APE++ + + YT D+W+VG + +++G + F G + ++ LK +
Sbjct: 188 -TRWYRAPEVI----LNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT 242
Query: 329 WEFDEEAFKNV-SEEGKDFIRRLLLRNK 355
E + + S+E K++++ L K
Sbjct: 243 GTPPAEFVQRLQSDEAKNYMKGLPELEK 270
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 86.8 bits (215), Expect = 8e-19
Identities = 62/308 (20%), Positives = 120/308 (38%), Gaps = 36/308 (11%)
Query: 36 YGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVF-----DI 90
Y R T I ++ K+ VS+ D Y D
Sbjct: 317 YCRLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDT 376
Query: 91 YSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV------- 143
Y+ + +I+ + + IG G FG VH+ N + V
Sbjct: 377 YTMPSTRDYEIQRERIE----LGRCIGEGQFGDVHQGIYMSPEN----PAMAVAIKTCKN 428
Query: 144 --SHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDY 201
S ++ ++ ++ E M Q HP ++ L ++ + I E + GEL +
Sbjct: 429 CTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELR------SF 480
Query: 202 -KMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLA 260
++ + + +L + Q S A+ ++ K +H D+ N++ + + VK+ DFGL+
Sbjct: 481 LQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC--VKLGDFGLS 538
Query: 261 TKLDPNEVVKISTGT--AEFAAPEIVEREPVGFYTDMWAVGVLAYVLLS-GLSPFAGEND 317
++ + K S G ++ APE + +D+W GV + +L G+ PF G +
Sbjct: 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
Query: 318 VETLKNVK 325
+ + ++
Sbjct: 599 NDVIGRIE 606
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 84.3 bits (209), Expect = 1e-18
Identities = 50/230 (21%), Positives = 88/230 (38%), Gaps = 35/230 (15%)
Query: 111 DILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINL 170
+ E IG G FG V R + R G A K S EI L H ++
Sbjct: 6 VLQESIGKGRFGEVWRGKWR--GEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILGF 62
Query: 171 HDAFEDDD----EMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
A D+ ++ L+ ++ G LF+ + Y ++ +I L T+ + H
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMI-----KLALSTASGLAH 115
Query: 227 MHEK--------NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNE-----VVKIST 273
+H + I H D+K +NI+ + + + D GLA + D
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNIL--VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 173
Query: 274 GTAEFAAPEIVEREPVGFYT------DMWAVGVLAYVLLSGLSPFAGEND 317
GT + APE+++ + D++A+G++ + + S D
Sbjct: 174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 223
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 84.8 bits (210), Expect = 1e-18
Identities = 50/229 (21%), Positives = 88/229 (38%), Gaps = 35/229 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
+ E IG G FG V R + R G A K S EI L H ++
Sbjct: 46 LQESIGKGRFGEVWRGKWR--GEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILGFI 102
Query: 172 DAFEDDD----EMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHM 227
A D+ ++ L+ ++ G LF+ + Y ++ +I L T+ + H+
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMI-----KLALSTASGLAHL 155
Query: 228 HEK--------NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNE-----VVKISTG 274
H + I H D+K +NI+ + + + D GLA + D G
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNIL--VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 213
Query: 275 TAEFAAPEIVEREPVGFY------TDMWAVGVLAYVLLSGLSPFAGEND 317
T + APE+++ + D++A+G++ + + S D
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 86.1 bits (213), Expect = 1e-18
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 16/222 (7%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
+ + ++G G FG V T + A K + + + +E +M +L H KL
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFL-QEAQVMKKLRHEKL 324
Query: 168 INLHDAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILM-TQTSPAVK 225
+ L+ ++ + + E++S G L D+ K + + + + M Q + +
Sbjct: 325 VQLYAVVSEEPIYI-VTEYMSKGSLL------DFLKGETGKYLRLPQLVDMAAQIASGMA 377
Query: 226 HMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGT--AEFAAPEI 283
++ N +H D++ NI+ K+ DFGLA ++ NE ++ APE
Sbjct: 378 YVERMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 435
Query: 284 VEREPVGFYTDMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
+D+W+ G+L L + G P+ G + E L V
Sbjct: 436 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 84.0 bits (208), Expect = 5e-18
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 18/223 (8%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKL 167
+ + ++G G FG V T + A K + + + +E +M +L H KL
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFL-QEAQVMKKLRHEKL 241
Query: 168 INLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM---TQTSPAV 224
+ L+ ++ + + E++S G L + + K + LP L+ Q + +
Sbjct: 242 VQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGK-------YLRLPQLVDMAAQIASGM 293
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGT--AEFAAPE 282
++ N +H D++ NI+ K+ DFGLA ++ NE ++ APE
Sbjct: 294 AYVERMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 283 IVEREPVGFYTDMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
+D+W+ G+L L + G P+ G + E L V
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 82.0 bits (203), Expect = 7e-18
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 18/184 (9%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 165
V + Y + +IG+G+FG ++ + G A K + + E I +
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLHIESKIYKMMQGG 64
Query: 166 KLI-NLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAV 224
I + + D V++ E L G L + K S V+ +L Q +
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVL-----LLADQMISRI 118
Query: 225 KHMHEKNIIHLDVKPENI-MCQTRNSTNVKMIDFGLATK-LDPNEVVKIS-------TGT 275
+++H KN IH DVKP+N M + V +IDFGLA K D I TGT
Sbjct: 119 EYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 178
Query: 276 AEFA 279
A +A
Sbjct: 179 ARYA 182
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 81.6 bits (202), Expect = 8e-18
Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 27/215 (12%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 165
V HY + IG G+FGV+ A KF + +R E L
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--EPRRSDAPQLRDEYRTYKLLAGC 65
Query: 166 KLI-NLHDAFEDDDEMVLIFEFL--SGGELFERITAPDYKMSEAEVIPVTLPILMTQTSP 222
I N++ ++ VL+ + L S +L + K S V + Q
Sbjct: 66 TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDL---CGRKFSVKTVA-----MAAKQMLA 117
Query: 223 AVKHMHEKNIIHLDVKPENIMC---QTRNSTNVKMIDFGLATK-LDPNEVVKIS------ 272
V+ +HEK++++ D+KP+N + ++N+ + ++DFG+ DP I
Sbjct: 118 RVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKN 177
Query: 273 -TGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLL 306
+GTA + + D+ A L +V +
Sbjct: 178 LSGTARYMSINTHLGREQSRRDDLEA---LGHVFM 209
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 82.7 bits (205), Expect = 8e-18
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKEL-IRKEIDIMNQLHHPKLINL 170
+ E+IG G FG V R R + A K + + + +E I+ Q HP ++ L
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 171 HDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM-TQTSPAVKHMHE 229
+ ++ E + GG+ + +E + V + M + ++++
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFL------TFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 230 KNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPEIVE 285
K IH D+ N + +N +K+ DFG++ + + + V S G + APE +
Sbjct: 232 KCCIHRDLAARNCLVTEKNV--LKISDFGMS-REEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 286 REPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
G Y+ D+W+ G+L + S G SP+ ++ +T + V
Sbjct: 289 Y---GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV 328
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 81.1 bits (201), Expect = 1e-17
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 24/222 (10%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
+L+E+G+G FGVV + + ++ A K I E E +E M +L HPKL+ +
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDV-AVKMIKEGSMSEDEFF-QEAQTMMKLSHPKLVKFY 69
Query: 172 DAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM-TQTSPAVKHMHEK 230
+ + ++ E++S G L +Y S + + + + M + +
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLL------NYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH 123
Query: 231 NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPEIVER 286
IH D+ N + VK+ DFG+ + ++ +S+ +F +APE+
Sbjct: 124 QFIHRDLAARNCLVDRDLC--VKVSDFGMTRYVLDDQY--VSSVGTKFPVKWSAPEVFHY 179
Query: 287 EPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
Y+ D+WA G+L + + S G P+ + E + V
Sbjct: 180 ---FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV 218
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 81.6 bits (202), Expect = 1e-17
Identities = 44/230 (19%), Positives = 93/230 (40%), Gaps = 32/230 (13%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLH 163
I + IG+G G V R R G + +PV ++ E IM Q
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQ----RDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILMTQTSP 222
HP +I L +++ E++ G L + + + + + L ++
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLD------TFLRTHDGQFTIMQLVGMLRGVGA 162
Query: 223 AVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF---- 278
++++ + +H D+ N++ + K+ DFGL+ L+ + +T +
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLV--CKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 279 AAPEIVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
APE + ++ D+W+ GV+ + +L+ G P+ + + + +V
Sbjct: 221 TAPEAIAF---RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 81.6 bits (202), Expect = 1e-17
Identities = 52/232 (22%), Positives = 95/232 (40%), Gaps = 35/232 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
++ +G+GAFG V++ G IPV S KE++ E +M +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGE---KVKIPVAIKELREATSPKANKEILD-EAYVMASV 74
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSP 222
+P + L + LI + + G L + + + L Q +
Sbjct: 75 DNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIG-----SQYLLNWCVQIAK 128
Query: 223 AVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF---- 278
+ ++ ++ ++H D+ N++ +T +VK+ DFGLA L E + G +
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG-GKVPIKW 185
Query: 279 AAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
A E I+ R YT D+W+ GV + L++ G P+ G E ++
Sbjct: 186 MALESILHRI----YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 82.0 bits (203), Expect = 1e-17
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 48/227 (21%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFI--PVSHNLEKELIRKEIDIMNQLH 163
V Y++++++G GA+G+V + +R+TG + A K I ++ + + +EI I+ +L
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 164 -HPKLINLHDAF--EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQT 220
H ++NL + ++D ++ L+F+++ +L I A + ++ Q
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIRANI--LEPVHK-----QYVVYQL 118
Query: 221 SPAVKHMHEKNIIHLDVKPENIMCQTRNST-NVKMIDFGLATKLDPNEVVKISTGTAEFA 279
+K++H ++H D+KP NI+ N+ +VK+ DFGL+ V + +
Sbjct: 119 IKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 280 ----------------------APEIVEREPVGF--YT---DMWAVG 299
APEI+ +G YT DMW++G
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEIL----LGSTKYTKGIDMWSLG 218
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 81.6 bits (202), Expect = 1e-17
Identities = 46/231 (19%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 112 ILEEIGTGAFGVVHRCR---ERKTGNIFAA----KFIPVSHNLEKELIRKEIDIMNQLHH 164
L+ +G+G FG VH+ E ++ I + + + + + L H
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVT--DHMLAIGSLDH 74
Query: 165 PKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILMTQTSPA 223
++ L + L+ ++L G L D+ + + P L Q +
Sbjct: 75 AHIVRLL-GLCPGSSLQLVTQYLPLGSLL------DHVRQHRGALGPQLLLNWGVQIAKG 127
Query: 224 VKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----A 279
+ ++ E ++H ++ N++ ++ + V++ DFG+A L P++ + + A+
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLKSPSQ--VQVADFGVADLLPPDDKQLLYSE-AKTPIKWM 184
Query: 280 APE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
A E I + YT D+W+ GV + L++ G P+AG E ++
Sbjct: 185 ALESIHFGK----YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 231
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 81.7 bits (202), Expect = 1e-17
Identities = 37/231 (16%), Positives = 78/231 (33%), Gaps = 35/231 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINL- 170
++++IG G +G V + R G A K + EI + H ++
Sbjct: 41 MVKQIGKGRYGEVWMGKWR--GEKVAVKVFF-TTEEASWFRETEIYQTVLMRHENILGFI 97
Query: 171 ---HDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHM 227
++ LI ++ G L++ + + ++ L + + H+
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLK--STTLDAKSML-----KLAYSSVSGLCHL 150
Query: 228 HEKN--------IIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNE-----VVKISTG 274
H + I H D+K +NI+ + + + D GLA K + G
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNIL--VKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG 208
Query: 275 TAEFAAPEI------VEREPVGFYTDMWAVGVLAYVLLSGLSPFAGENDVE 319
T + PE+ DM++ G++ + + + +
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 80.8 bits (200), Expect = 2e-17
Identities = 49/214 (22%), Positives = 80/214 (37%), Gaps = 34/214 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
+ ++G G FG V T + V + EIDI+ L
Sbjct: 35 KIRDLGEGHFGKVSLYCYDPTND---GTGEMVAVKALKADAGPQHRSGWKQ-EIDILRTL 90
Query: 163 HHPKLINLHDAFEDDDE--MVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQT 220
+H +I ED + L+ E++ G L DY + + L + Q
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR------DY-LPRHSIGLAQLLLFAQQI 143
Query: 221 SPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF-- 278
+ ++H ++ IH D+ N++ VK+ DFGLA + +
Sbjct: 144 CEGMAYLHAQHYIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPEGHEYYRVREDGDSPV 201
Query: 279 --AAPE-IVEREPVGFYT--DMWAVGVLAYVLLS 307
APE + E + FY D+W+ GV Y LL+
Sbjct: 202 FWYAPECLKEYK---FYYASDVWSFGVTLYELLT 232
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 80.3 bits (199), Expect = 2e-17
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
L+E+GTG FGVV + R ++ A K I E E I E +M L H KL+ L+
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQLY 85
Query: 172 DAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILM-TQTSPAVKHMHEK 230
+ +I E+++ G L +Y + M A++++ K
Sbjct: 86 GVCTKQRPIFIITEYMANGCLL------NYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 231 NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPEIVER 286
+H D+ N + + VK+ DFGL+ + +E S+ ++F + PE++
Sbjct: 140 QFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEVLMY 195
Query: 287 EPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
++ D+WA GVL + + S G P+ + ET +++
Sbjct: 196 ---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 80.0 bits (198), Expect = 3e-17
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 27/228 (11%)
Query: 112 ILEEIGTGAFGVVHR--CRERKTGNIFAA----KFIPVSHNLEKELIRKEIDIMNQLHHP 165
+LE++G G+FGVV R + A K +S + +E++ M+ L H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 166 KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVK 225
LI L+ M ++ E G L +R+ TL Q + +
Sbjct: 82 NLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRKHQGHFL-----LGTLSRYAVQVAEGMG 135
Query: 226 HMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAP 281
++ K IH D+ N++ TR+ VK+ DFGL L N+ + + AP
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 282 E-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
E + R ++ D W GV + + + G P+ G N + L +
Sbjct: 194 ESLKTRT----FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 80.0 bits (198), Expect = 3e-17
Identities = 45/242 (18%), Positives = 98/242 (40%), Gaps = 37/242 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLH 163
+ E+G GAFG V + V + K+ R E +++ L
Sbjct: 19 LKRELGEGAFGKVFLAECY--NLSPTKDKMLVAVKALKDPTLAARKDFQR-EAELLTNLQ 75
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGEL--FERITAPDYKMSEAEVI-----PVTLPIL 216
H ++ + D D ++++FE++ G+L F R PD + + L +
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 217 M---TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST 273
+ +Q + + ++ ++ +H D+ N + VK+ DFG++ + + ++
Sbjct: 136 LHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL--VKIGDFGMSRDVYSTDYYRV-G 192
Query: 274 GTAEF----AAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
G PE I+ +T D+W+ GV+ + + + G P+ ++ E ++ +
Sbjct: 193 GHTMLPIRWMPPESIMY----RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 248
Query: 325 KA 326
Sbjct: 249 TQ 250
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 80.0 bits (198), Expect = 4e-17
Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 34/215 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
+ ++G G FG V CR G+ V N +L + EI+I+ L
Sbjct: 25 RIRDLGEGHFGKVELCRYDPEGD---NTGEQVAVKSLKPESGGNHIADLKK-EIEILRNL 80
Query: 163 HHPKLINLHDAFEDDDE--MVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILMTQ 219
+H ++ +D + LI EFL G L +Y ++ ++ Q
Sbjct: 81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLK------EYLPKNKNKINLKQQLKYAVQ 134
Query: 220 TSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF- 278
+ ++ + +H D+ N++ ++ + VK+ DFGL ++ ++ +
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVLVESEHQ--VKIGDFGLTKAIETDKEYYTVKDDRDSP 192
Query: 279 ---AAPE-IVEREPVGFYT--DMWAVGVLAYVLLS 307
APE +++ + FY D+W+ GV + LL+
Sbjct: 193 VFWYAPECLMQSK---FYIASDVWSFGVTLHELLT 224
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 80.9 bits (200), Expect = 5e-17
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
+ +++G G FG V K + A K + + + E ++M L H KL+ LH
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAFL-AEANVMKTLQHDKLVKLH 249
Query: 172 DAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILM-TQTSPAVKHMHE 229
+ + I EF++ G L D+ K E P+ I Q + + + +
Sbjct: 250 AVVTKEPIYI-ITEFMAKGSLL------DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 230 KNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFA----APEIVE 285
+N IH D++ NI+ K+ DFGLA ++ NE G A+F APE +
Sbjct: 303 RNYIHRDLRAANILVSASL--VCKIADFGLARVIEDNEYTA-REG-AKFPIKWTAPEAIN 358
Query: 286 REPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
G +T D+W+ G+L +++ G P+ G ++ E ++ ++
Sbjct: 359 ---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 399
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 81.5 bits (201), Expect = 5e-17
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 32/226 (14%)
Query: 115 EIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLHHPK 166
E+G G FG V + R K I V + + E + +E IM+QL +P
Sbjct: 343 ELGCGNFGSVRQGVYRMRK-----KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY 397
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
++ L + ++L+ E GG L + + E+ + L+ Q S +K+
Sbjct: 398 IVRLI-GVCQAEALMLVMEMAGGGPLHKFL-----VGKREEIPVSNVAELLHQVSMGMKY 451
Query: 227 MHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPE 282
+ EKN +H ++ N++ R+ K+ DFGL+ L ++ + ++ APE
Sbjct: 452 LEEKNFVHRNLAARNVLLVNRHY--AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 509
Query: 283 IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
+ ++ D+W+ GV + LS G P+ E + +
Sbjct: 510 CINF---RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 552
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 80.8 bits (199), Expect = 5e-17
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 165
V + + + +IG+G+FG ++ +T A K V + + E I L
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV--KTKHPQLLYESKIYRILQGG 62
Query: 166 KLI-NLHDAFEDDDEMVLIFEFL--SGGELFERITAPDYKMSEAEVIPVTLPILMTQTSP 222
I N+ + D VL+ + L S +LF K+S V+ +L Q
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFC---SRKLSLKTVL-----MLADQMIN 114
Query: 223 AVKHMHEKNIIHLDVKPENI-MCQTRNSTNVKMIDFGLATK-LDPNEVVKIS-------T 273
V+ +H K+ +H D+KP+N M R + V +IDFGLA K D + I T
Sbjct: 115 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLT 174
Query: 274 GTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLL 306
GTA +A+ D+ + L YVL+
Sbjct: 175 GTARYASVNTHLGIEQSRRDDLES---LGYVLM 204
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 79.2 bits (196), Expect = 5e-17
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 115 EIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLHHPK 166
E+G G FG V + R K I V + + E + +E IM+QL +P
Sbjct: 17 ELGCGNFGSVRQGVYRMRK-----KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY 71
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
++ L + ++L+ E GG L + + ++ + L+ Q S +K+
Sbjct: 72 IVRLI-GVCQAEALMLVMEMAGGGPLHKFLVGKREEIP-----VSNVAELLHQVSMGMKY 125
Query: 227 MHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPE 282
+ EKN +H D+ N++ R+ K+ DFGL+ L ++ + ++ APE
Sbjct: 126 LEEKNFVHRDLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
Query: 283 -IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
I R+ ++ D+W+ GV + LS G P+ E + +
Sbjct: 184 CINFRK----FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 226
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Length = 305
Score = 79.0 bits (195), Expect = 8e-17
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
W+RVG R T + L Y+FRV AEN +G S PS S+ TK+
Sbjct: 243 ERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKE 293
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type
III domain containing protein, cytoskeleton, muscle
contraction; NMR {Mus musculus} SCOP: b.1.2.1
Length = 111
Score = 74.3 bits (183), Expect = 1e-16
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 2 SSWIRV--GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
W+ + L G + FRV N+ GRS+P+T +T +++
Sbjct: 53 EEWVPANKEPVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRES 106
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 78.0 bits (193), Expect = 1e-16
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 26/224 (11%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
++E +G G FG V + A K + + E ++M QL H +L+ L+
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAFL-AEANLMKQLQHQRLVRLY 74
Query: 172 DAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILM-TQTSPAVKHMHE 229
+ + I E++ G L D+ K + + + M Q + + + E
Sbjct: 75 AVVTQEPIYI-ITEYMENGSLV------DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 230 KNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPEIVE 285
+N IH D++ NI+ S K+ DFGLA ++ NE G A+F APE +
Sbjct: 128 RNYIHRDLRAANILVSDTLS--CKIADFGLARLIEDNEYTA-REG-AKFPIKWTAPEAIN 183
Query: 286 REPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
G +T D+W+ G+L +++ G P+ G + E ++N++
Sbjct: 184 Y---GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 78.6 bits (194), Expect = 1e-16
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 106 VYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHP 165
V ++ + ++IG G FG + + T A K + E QL
Sbjct: 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--EPMKSRAPQLHLEYRFYKQLGSG 64
Query: 166 KLI-NLHDAFEDDDEMVLIFEFL--SGGELFERITAPDYKMSEAEVIPVTLPILMTQTSP 222
I ++ ++ E L S +LF+ D S V+ ++ Q
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL---CDRTFSLKTVL-----MIAIQLIS 116
Query: 223 AVKHMHEKNIIHLDVKPENIM---CQTRNSTNVKMIDFGLATK-LDPNEVVKIS------ 272
++++H KN+I+ DVKPEN + + + +IDF LA + +DP I
Sbjct: 117 RMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKS 176
Query: 273 -TGTAEFA 279
TGTA +
Sbjct: 177 LTGTARYM 184
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 78.1 bits (193), Expect = 1e-16
Identities = 52/229 (22%), Positives = 93/229 (40%), Gaps = 38/229 (16%)
Query: 115 EIGTGAFGVVHRCRERKTGNIFAAKFIPV----------SHNLEKELIRKEIDIMNQLHH 164
E+G+G FG V + + V L+ EL+ E ++M QL +
Sbjct: 24 ELGSGNFGTVKKGYYQMKK-----VVKTVAVKILKNEANDPALKDELLA-EANVMQQLDN 77
Query: 165 PKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAV 224
P ++ + + + +L+ E G L Y V + L+ Q S +
Sbjct: 78 PYIVRMI-GICEAESWMLVMEMAELGPLN------KYLQQNRHVKDKNIIELVHQVSMGM 130
Query: 225 KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AA 280
K++ E N +H D+ N++ T++ K+ DFGL+ L +E + ++ A
Sbjct: 131 KYLEESNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 188
Query: 281 PE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
PE I + ++ D+W+ GVL + S G P+ G E +
Sbjct: 189 PECINYYK----FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 233
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 77.2 bits (191), Expect = 3e-16
Identities = 48/242 (19%), Positives = 102/242 (42%), Gaps = 38/242 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
+EE+G FG V++ G + V L +E E + +L
Sbjct: 13 FMEELGEDRFGKVYKGHLF--GPAPGEQTQAVAIKTLKDKAEGPLREEFRH-EAMLRARL 69
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGEL--FERITAPDYKMSEAEVIPVTLPIL---- 216
HP ++ L D + +IF + S G+L F + +P + + L
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 217 ----MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIS 272
+ Q + ++++ +++H D+ N++ + + VK+ D GL ++ + K+
Sbjct: 130 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN--VKISDLGLFREVYAADYYKLL 187
Query: 273 TGTAEF----AAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKN 323
+ APE I+ G ++ D+W+ GV+ + + S GL P+ G ++ + ++
Sbjct: 188 GN-SLLPIRWMAPEAIMY----GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 242
Query: 324 VK 325
++
Sbjct: 243 IR 244
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 76.9 bits (190), Expect = 3e-16
Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 39/232 (16%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
+ IG G FG VH+ N + V S ++ ++ ++ E M Q
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPEN----PALAVAIKTCKNCTSDSVREKFLQ-EALTMRQF 73
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILMTQTS 221
HP ++ L ++ + I E + GEL + ++ + + +L + Q S
Sbjct: 74 DHPHIVKLIGVITENPVWI-IMELCTLGELR------SFLQVRKYSLDLASLILYAYQLS 126
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF--- 278
A+ ++ K +H D+ N++ + + VK+ DFGL+ ++ + K +
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDC--VKLGDFGLSRYMEDSTYYK--ASKGKLPIK 182
Query: 279 -AAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
APE I R +T D+W GV + +L G+ PF G + + + +
Sbjct: 183 WMAPESINFRR----FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 77.6 bits (191), Expect = 4e-16
Identities = 44/247 (17%), Positives = 88/247 (35%), Gaps = 44/247 (17%)
Query: 107 YDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIR-KEIDIMNQLHHP 165
D+ +LE IG G +G V++ A K ++ + I K I + + H
Sbjct: 12 LDNLKLLELIGRGRYGAVYKGSLD--ERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHD 67
Query: 166 KLINL-----HDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQT 220
+ + E +L+ E+ G L + ++ + +
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL-------AHSV 120
Query: 221 SPAVKHMHE---------KNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI 271
+ + ++H I H D+ N++ +N + DFGL+ +L N +V+
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVL--VKNDGTCVISDFGLSMRLTGNRLVRP 178
Query: 272 S---------TGTAEFAAPEIVE-------REPVGFYTDMWAVGVLAYVLLSGLSPFAGE 315
GT + APE++E E DM+A+G++ + + +
Sbjct: 179 GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238
Query: 316 NDVETLK 322
V +
Sbjct: 239 ESVPEYQ 245
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 76.1 bits (188), Expect = 6e-16
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 32/225 (14%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
+L+ IG G FG V R GN A K I + L E +M QL H L+ L
Sbjct: 25 LLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFL--AEASVMTQLRHSNLVQLL 80
Query: 172 DA-FEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILM-TQTSPAVKHMH 228
E+ + ++ E+++ G L DY + V+ + A++++
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLV------DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 229 EKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPEIV 284
N +H D+ N++ N K+ DFGL + + T + APE +
Sbjct: 135 GNNFVHRDLAARNVLVSEDNV--AKVSDFGLT------KEASSTQDTGKLPVKWTAPEAL 186
Query: 285 EREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
++ D+W+ G+L + + S G P+ + + V+
Sbjct: 187 RE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE 228
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 76.6 bits (189), Expect = 7e-16
Identities = 44/241 (18%), Positives = 96/241 (39%), Gaps = 36/241 (14%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLH 163
+ E+G GAFG V + + V S + ++ R E +++ L
Sbjct: 45 LKWELGEGAFGKVFLAECH--NLLPEQDKMLVAVKALKEASESARQDFQR-EAELLTMLQ 101
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGEL--FERITAPDYKMSEAEVIPVTLPILM---- 217
H ++ + ++++FE++ G+L F R PD K+ P+ +
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 218 ---TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTG 274
+Q + + ++ + +H D+ N + VK+ DFG++ + + ++ G
Sbjct: 162 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV--VKIGDFGMSRDIYSTDYYRV-GG 218
Query: 275 TAEF----AAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
PE I+ +T D+W+ GV+ + + + G P+ ++ E + +
Sbjct: 219 RTMLPIRWMPPESILY----RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 274
Query: 326 A 326
Sbjct: 275 Q 275
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW-
type protein, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 110
Score = 71.6 bits (176), Expect = 8e-16
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 2 SSWIRV--GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
WI T ITGL + RV A N G S+P S I K++
Sbjct: 52 EDWIVANKDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKES 105
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 75.9 bits (187), Expect = 1e-15
Identities = 30/208 (14%), Positives = 73/208 (35%), Gaps = 39/208 (18%)
Query: 101 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMN 160
+ + + + ++IG+G FG+++ A + V + L E+
Sbjct: 30 VLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFS-ELKFYQ 88
Query: 161 QLHHPKLINLHDAFEDDDEM-------------------VLIFEFL--SGGELFERITAP 199
++ I + D + ++ E L ++ +
Sbjct: 89 RVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQ---- 144
Query: 200 DYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGL 259
+ ++ V+ + + +L ++++HE +H D+K N++ +N V + D+GL
Sbjct: 145 NGTFKKSTVLQLGIRMLD-----VLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGL 199
Query: 260 ATK-LDPNEVVKIS-------TGTAEFA 279
+ + + GT EF
Sbjct: 200 SYRYCPNGNHKQYQENPRKGHNGTIEFT 227
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 75.8 bits (187), Expect = 1e-15
Identities = 52/266 (19%), Positives = 101/266 (37%), Gaps = 40/266 (15%)
Query: 85 QYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV- 143
Y F + + ++ ++ ++ +G GAFG V+ + G + V
Sbjct: 11 NYCFAGKTSSISDLKEVPRKNI----TLIRGLGHGAFGEVYEGQVS--GMPNDPSPLQVA 64
Query: 144 --------SHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGEL--F 193
S E + + E I+++ +H ++ ++ E ++GG+L F
Sbjct: 65 VKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSF 123
Query: 194 ERITAPDYKMSEAEVIPVTLPIL---MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNST 250
R T P + + L + +++ E + IH D+ N +
Sbjct: 124 LRETRPRPSQPS----SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG 179
Query: 251 N-VKMIDFGLATKLDPNEVVKISTGTAEFA----APE-IVEREPVGFYT---DMWAVGVL 301
K+ DFG+A + + G A PE +E G +T D W+ GVL
Sbjct: 180 RVAKIGDFGMARDIYRASYYR-KGGCAMLPVKWMPPEAFME----GIFTSKTDTWSFGVL 234
Query: 302 AYVLLS-GLSPFAGENDVETLKNVKA 326
+ + S G P+ +++ E L+ V +
Sbjct: 235 LWEIFSLGYMPYPSKSNQEVLEFVTS 260
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 76.2 bits (188), Expect = 1e-15
Identities = 48/232 (20%), Positives = 97/232 (41%), Gaps = 36/232 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
I + +G G FG V R + K I V + ++ + E IM Q
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSK----KEISVAIKTLKVGYTEKQRRDFLG-EASIMGQF 103
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILMTQTS 221
HP +I L ++++ E++ G L + + +A+ + L ++ +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRGIA 157
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNSTN-VKMIDFGLATKLDPNEVVKISTGTAEF-- 278
+K++ + +H D+ NI+ NS K+ DFGL L+ + +T +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 279 --AAPEIVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
+PE + +T D+W+ G++ + ++S G P+ ++ + +K V
Sbjct: 215 RWTSPEAIAY---RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 76.6 bits (189), Expect = 1e-15
Identities = 51/225 (22%), Positives = 87/225 (38%), Gaps = 32/225 (14%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLINLH 171
+L+ IG G FG V R GN A K I + L E +M QL H L+ L
Sbjct: 197 LLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFL--AEASVMTQLRHSNLVQLL 252
Query: 172 DA-FEDDDEMVLIFEFLSGGELFERITAPDY--KMSEAEVIPVTLPILMTQTSPAVKHMH 228
E+ + ++ E+++ G L DY + + L A++++
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLV------DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 229 EKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFA----APEIV 284
N +H D+ N++ N K+ DFGL E + APE +
Sbjct: 307 GNNFVHRDLAARNVLVSEDNV--AKVSDFGLT-----KEASSTQDT-GKLPVKWTAPEAL 358
Query: 285 EREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
++ D+W+ G+L + + S G P+ + + V+
Sbjct: 359 RE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE 400
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 75.0 bits (185), Expect = 2e-15
Identities = 43/238 (18%), Positives = 95/238 (39%), Gaps = 34/238 (14%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
+ E+G G+FG+V+ + G + V S E + E +M +
Sbjct: 29 MSRELGQGSFGMVYEGVAK--GVVKDEPETRVAIKTVNEAASMRERIEFLN-EASVMKEF 85
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGEL--FERITAPDYKMSEAEVIPVTLPILM--- 217
+ ++ L ++I E ++ G+L + R P + + P +L ++
Sbjct: 86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAM-ANNPVLAPPSLSKMIQMA 144
Query: 218 TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAE 277
+ + + +++ +H D+ N M VK+ DFG+ + + + G
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDF--TVKIGDFGMTRDIYETDYYR-KGGKGL 201
Query: 278 F----AAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVKA 326
+PE + + G +T D+W+ GV+ + + + P+ G ++ + L+ V
Sbjct: 202 LPVRWMSPESLKD----GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold,
fibronectin type III, structural genomics; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 117
Score = 70.9 bits (174), Expect = 2e-15
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 3 SWIRVGNT-RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
SW V N + T + GL P Y F V A N G SDPS SD + T+D+
Sbjct: 61 SWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 75.1 bits (185), Expect = 2e-15
Identities = 49/231 (21%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQLH 163
+ IG G FG V++ + + K +PV ++ E IM Q
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSS---GKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILMTQTSP 222
H +I L M++I E++ G L + + + E + L ++ +
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALD------KFLREKDGEFSVLQLVGMLRGIAA 158
Query: 223 AVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKL-DPNEVVKISTGTAEF--- 278
+K++ N +H D+ NI+ + K+ DFGL+ L D E ++G +
Sbjct: 159 GMKYLANMNYVHRDLAARNILVNSNLV--CKVSDFGLSRVLEDDPEATYTTSG-GKIPIR 215
Query: 279 -AAPEIVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
APE + +T D+W+ G++ + +++ G P+ ++ E +K +
Sbjct: 216 WTAPEAISY---RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 106
Score = 70.4 bits (173), Expect = 2e-15
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ V T +I GLSP +Y FRV A N GR PS T + +
Sbjct: 50 GPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 75.0 bits (185), Expect = 2e-15
Identities = 60/283 (21%), Positives = 105/283 (37%), Gaps = 55/283 (19%)
Query: 90 IYSKYVPQPVDIKTSSVYDHYD-----------ILEEIGTGAFGVVHRCRERKTGNIFAA 138
+ + P P+ + + + + +IG GAFG V + R G +
Sbjct: 18 LLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAP--GLLPYE 75
Query: 139 KFIPV---------SHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSG 189
F V S +++ + R E +M + +P ++ L M L+FE+++
Sbjct: 76 PFTMVAVKMLKEEASADMQADFQR-EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAY 134
Query: 190 GEL--FERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMH----------------EKN 231
G+L F R +P S + T + + P + E+
Sbjct: 135 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK 194
Query: 232 IIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTA---EFAAPE-IVERE 287
+H D+ N + VK+ DFGL+ + + K A + PE I
Sbjct: 195 FVHRDLATRNCLVGENM--VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-- 250
Query: 288 PVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVKA 326
YT D+WA GV+ + + S GL P+ G E + V+
Sbjct: 251 --NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD 291
>1x3d_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 118
Score = 70.5 bits (173), Expect = 2e-15
Identities = 14/50 (28%), Positives = 19/50 (38%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ + IT LSP +FR+ A N YG S S T+
Sbjct: 62 GEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSG 111
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 74.6 bits (184), Expect = 3e-15
Identities = 45/233 (19%), Positives = 96/233 (41%), Gaps = 24/233 (10%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIF---AAKFIPVSHNLEKELIR--KEIDIMNQLHHPK 166
+ + +G G FG V ++ A K + + ++ ++E+ E M HP
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 167 LINL-----HDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTS 221
+I L + + + ++I F+ G+L + + + TL M +
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTA---EF 278
++++ +N +H D+ N M + + V + DFGL+ K+ + + ++
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMT--VCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 279 AAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVKA 326
A E + + YT D+WA GV + + + G++P+ G + E +
Sbjct: 216 IAIESLAD----RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH 264
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 74.7 bits (184), Expect = 3e-15
Identities = 52/267 (19%), Positives = 101/267 (37%), Gaps = 40/267 (14%)
Query: 84 DQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV 143
Y F + + ++ ++ ++ +G GAFG V+ + G + V
Sbjct: 51 PNYCFAGKTSSISDLKEVPRKNI----TLIRGLGHGAFGEVYEGQVS--GMPNDPSPLQV 104
Query: 144 ---------SHNLEKELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGEL-- 192
S E + + E I+++ +H ++ ++ E ++GG+L
Sbjct: 105 AVKTLPEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 163
Query: 193 FERITAPDYKMSEAEVIPVTLPIL---MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNS 249
F R T P + + L + +++ E + IH D+ N +
Sbjct: 164 FLRETRPRPSQPS----SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP 219
Query: 250 TN-VKMIDFGLATKLDPNEVVKISTGTAEFA----APE-IVEREPVGFYT---DMWAVGV 300
K+ DFG+A + + G A PE +E G +T D W+ GV
Sbjct: 220 GRVAKIGDFGMARDIYRAGYYR-KGGCAMLPVKWMPPEAFME----GIFTSKTDTWSFGV 274
Query: 301 LAYVLLS-GLSPFAGENDVETLKNVKA 326
L + + S G P+ +++ E L+ V +
Sbjct: 275 LLWEIFSLGYMPYPSKSNQEVLEFVTS 301
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 74.3 bits (183), Expect = 4e-15
Identities = 48/234 (20%), Positives = 93/234 (39%), Gaps = 25/234 (10%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIF---AAKFIPVSHNLEKELIR--KEIDIMNQLHHPK 166
+ +G G FG V + ++ F A K + ++ +E M + HP
Sbjct: 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86
Query: 167 LINL------HDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQT 220
+ L A ++I F+ G+L + A + + TL M
Sbjct: 87 VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146
Query: 221 SPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTA---E 277
+ ++++ +N IH D+ N M + V + DFGL+ K+ + + + +
Sbjct: 147 ACGMEYLSSRNFIHRDLAARNCMLAEDMT--VCVADFGLSRKIYSGDYYRQGCASKLPVK 204
Query: 278 FAAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVKA 326
+ A E + + YT D+WA GV + +++ G +P+AG + E +
Sbjct: 205 WLALESLAD----NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes
(CDON)binding...; fibronectin type III, FN3; NMR {Mus
musculus} SCOP: b.1.2.1
Length = 121
Score = 69.7 bits (171), Expect = 5e-15
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 2 SSWIRVGNT---RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
WI + ++ ITGL G Y+FRV A N+ G S+PS S
Sbjct: 62 GDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSG 115
>2crz_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 110
Score = 68.5 bits (168), Expect = 1e-14
Identities = 13/52 (25%), Positives = 18/52 (34%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
V ++ L PG Y FR+ A N G S D+ T +
Sbjct: 54 DEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 73.1 bits (180), Expect = 1e-14
Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 36/241 (14%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQL- 162
+ +G GAFG V G + V +H EKE + E+ IM+ L
Sbjct: 50 FGKTLGAGAFGKVVEATAF--GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG 107
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGELFE-----RITAPDYKMSEAEVIPVTLPILM 217
H ++NL A +++I E+ G+L + L+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 218 ---TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTG 274
+Q + + + KN IH DV N++ + K+ DFGLA + + +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH--VAKIGDFGLARDIMNDSNYIVKGN 225
Query: 275 TAEF----AAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAG-ENDVETLKNV 324
A APE I + YT D+W+ G+L + + S GL+P+ G + + K V
Sbjct: 226 -ARLPVKWMAPESIFD----CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 280
Query: 325 K 325
K
Sbjct: 281 K 281
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 72.3 bits (178), Expect = 2e-14
Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 26/229 (11%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIF---AAKFIPVSHNL-EKELIRKEIDIMNQLHHPKL 167
IG G FGVV+ A K + + + E +E +M L+HP +
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 168 INLHDAFEDDDEMVL-IFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
+ L + + + ++ G+L + I +P + ++I Q + +++
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF-----GLQVARGMEY 139
Query: 227 MHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGT-AEF----AAP 281
+ E+ +H D+ N M + VK+ DFGLA + E + A A
Sbjct: 140 LAEQKFVHRDLAARNCMLDESFT--VKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197
Query: 282 E-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
E + +T D+W+ GVL + LL+ G P+ + + +
Sbjct: 198 ESLQT----YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA 242
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 71.8 bits (177), Expect = 2e-14
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 29/227 (12%)
Query: 112 ILEEIGTGAFGVVHR--CRERKTGNIFAA-KFIPVSHNL-EKELIRKEIDIMNQLHHPKL 167
+ +G G FG V+ K I A K L KE E IM L HP +
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 168 INLHDAFEDDDEMVLIFEFLSGGELFERITAPDY-KMSEAEVIPVTLPILMTQTSPAVKH 226
+ L +++ +I E GEL Y + ++ + +TL + Q A+ +
Sbjct: 76 VKLI-GIIEEEPTWIIMELYPYGELG------HYLERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 227 MHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPE 282
+ N +H D+ NI+ + VK+ DFGL+ ++ + K +PE
Sbjct: 129 LESINCVHRDIAVRNILVASPEC--VKLGDFGLSRYIEDEDYYK--ASVTRLPIKWMSPE 184
Query: 283 -IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNV 324
I R +T D+W V + +LS G PF + + + +
Sbjct: 185 SINFRR----FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL 227
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 112
Score = 68.1 bits (167), Expect = 2e-14
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 2 SSWIRV--GNTRFTTMAITGLSPGHQYEFRVYAENVYGR-SDPSTTSDLITTKDTFK 55
W++ N ++GL+ YEFRV A+N G S PS SD IT +D +
Sbjct: 55 GRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVE 111
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural
protein; 1.65A {Homo sapiens}
Length = 197
Score = 70.1 bits (172), Expect = 2e-14
Identities = 20/51 (39%), Positives = 24/51 (47%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
W + T ITGL G +Y FRV A+N G SDP S + KD
Sbjct: 147 DKWATCATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVIAKD 197
Score = 62.0 bits (151), Expect = 1e-11
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 2 SSWIRVGNTRFTTMA-ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
++ V T + L G Y FRV AEN YG P+ T++ + +
Sbjct: 50 KAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASE 101
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 72.3 bits (178), Expect = 2e-14
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 47/249 (18%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
+ + +G GAFG V + + V + +L+ E+++M +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS-EMEMMKMI 97
Query: 163 -HHPKLINLHDAFEDDDEMVLIFEFLSGGELFE-------RITAPDYKMSEAEVIPVTLP 214
H +INL A D + +I E+ S G L E Y ++ +T
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 215 ILMT---QTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI 271
L++ Q + ++++ + IH D+ N++ N +K+ DFGLA ++ + K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN--VMKIADFGLARDINNIDYYKK 215
Query: 272 STGTAEFAAPEIVEREPV----------GFYT---DMWAVGVLAYVLLS-GLSPFAGEND 317
+T R PV YT D+W+ GVL + + + G SP+ G
Sbjct: 216 TTNG----------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Query: 318 VETLKNVKA 326
E K +K
Sbjct: 266 EELFKLLKE 274
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 72.4 bits (178), Expect = 2e-14
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 47/249 (18%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
+ + +G G FG V + + V + +L+ E+++M +
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS-EMEMMKMI 143
Query: 163 -HHPKLINLHDAFEDDDEMVLIFEFLSGGELFE-------RITAPDYKMSEAEVIPVTLP 214
H +INL A D + +I E+ S G L E Y ++ +T
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 215 ILMT---QTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI 271
L++ Q + ++++ + IH D+ N++ N +K+ DFGLA ++ + K
Sbjct: 204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN--VMKIADFGLARDINNIDYYKK 261
Query: 272 STGTAEFAAPEIVEREPV----------GFYT---DMWAVGVLAYVLLS-GLSPFAGEND 317
+T R PV YT D+W+ GVL + + + G SP+ G
Sbjct: 262 TTNG----------RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311
Query: 318 VETLKNVKA 326
E K +K
Sbjct: 312 EELFKLLKE 320
>1x5x_A Fibronectin type-III domain containing protein 3A; structural
genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 109
Score = 67.4 bits (165), Expect = 2e-14
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 6 RVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ +T + L +Y+F+V A N G+S+PS + T D+
Sbjct: 60 DGEDLAYT---VKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS 104
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 71.5 bits (176), Expect = 3e-14
Identities = 60/266 (22%), Positives = 101/266 (37%), Gaps = 47/266 (17%)
Query: 91 YSKYVPQPVDIKTSSVYDHYDI--LEEIGTGAFGVVHRCRERKTGNIFAAKFIPV----- 143
+ + D V D DI + IG G FG V + R +K G +
Sbjct: 6 HHHHGKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDG-----LRMDAAIKRM 60
Query: 144 ----SHNLEKELIRKEIDIMNQL-HHPKLINLHDAFEDDDEMVLIFEFLSGGELFE---- 194
S + ++ E++++ +L HHP +INL A E + L E+ G L +
Sbjct: 61 KEYASKDDHRDFAG-ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 119
Query: 195 -RITAPDYKMSEAEVIPVTLPIL-----MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRN 248
R+ D + A TL + + ++ +K IH D+ NI+
Sbjct: 120 SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 179
Query: 249 STNVKMIDFGLATKLDPNEVVKISTGTAEF----AAPE-IVEREPVGFYT---DMWAVGV 300
K+ DFGL+ + V + A E + YT D+W+ GV
Sbjct: 180 --VAKIADFGLSRGQE----VYVKKTMGRLPVRWMAIESLNYS----VYTTNSDVWSYGV 229
Query: 301 LAYVLLS-GLSPFAGENDVETLKNVK 325
L + ++S G +P+ G E + +
Sbjct: 230 LLWEIVSLGGTPYCGMTCAELYEKLP 255
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 71.7 bits (176), Expect = 3e-14
Identities = 34/219 (15%), Positives = 73/219 (33%), Gaps = 37/219 (16%)
Query: 92 SKYVPQPV---DIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNI-----FAAKFIPV 143
+++ + +I T + + IG G FG ++ + ++ K P
Sbjct: 16 KRHLAEQFAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPS 75
Query: 144 SH-----------NLEKELIRKEIDIMNQLHHPKLINLH----DAFEDDDEMVLIFEFLS 188
+ K ++ +L + + +I +
Sbjct: 76 DNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF- 134
Query: 189 GGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRN 248
G +L + A + S V+ L + ++++HE +H D+K N++ +N
Sbjct: 135 GSDLQKIYEANAKRFSRKTVL-----QLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN 189
Query: 249 STNVKMIDFGLATK-LDPNEVVKIS-------TGTAEFA 279
V ++D+GLA + + GT EF
Sbjct: 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFT 228
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 124
Score = 67.4 bits (165), Expect = 4e-14
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 2 SSWIRVGNT----RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
W+ + +M + L+P Y FR+ N+ G S PS S I T +
Sbjct: 64 EEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQS 119
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 71.2 bits (175), Expect = 7e-14
Identities = 58/248 (23%), Positives = 95/248 (38%), Gaps = 47/248 (18%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
+ + +G GAFG V + V + +LI E+++M +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-EMEMMKMI 131
Query: 163 -HHPKLINLHDAFEDDDEMVLIFEFLSGGELFE-------RITAPDYKMSEAEVIPVTLP 214
H +INL A D + +I E+ S G L E Y S ++
Sbjct: 132 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 215 ILM---TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKI 271
L+ Q + ++++ K IH D+ N++ N +K+ DFGLA + + K
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN--VMKIADFGLARDIHHIDYYKK 249
Query: 272 STGTAEFAAPEIVEREPV----------GFYT---DMWAVGVLAYVLLS-GLSPFAGEND 317
+T R PV YT D+W+ GVL + + + G SP+ G
Sbjct: 250 TTNG----------RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299
Query: 318 VETLKNVK 325
E K +K
Sbjct: 300 EELFKLLK 307
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 71.1 bits (174), Expect = 7e-14
Identities = 52/307 (16%), Positives = 105/307 (34%), Gaps = 77/307 (25%)
Query: 77 DEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIF 136
E +DY + + ++ + D+ Y ++ ++G G F V + +
Sbjct: 15 QEDPNDYCKGGY-----HLVKIGDL----FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFV 65
Query: 137 AAKFIPVSHNLEKELIRKEIDIMNQL-----HHP---KLINLHDAFE----DDDEMVLIF 184
A K + S E EI ++ + + P ++ L D F+ + + ++F
Sbjct: 66 AMK-VVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVF 124
Query: 185 EFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEK-NIIHLDVKPENIM 243
E L G L + I +Y+ + + ++ + ++H K IIH D+KPENI+
Sbjct: 125 EVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ----GLDYLHTKCRIIHTDIKPENIL 179
Query: 244 CQTRNST-----------------------------------------------NVKMID 256
VK+ D
Sbjct: 180 LSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIAD 239
Query: 257 FGLATKLDPNEVVKISTGTAEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAGEN 316
G A + + I T ++ + E++ D+W+ +A+ L +G F +
Sbjct: 240 LGNACWVHKHFTEDIQTR--QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297
Query: 317 DVETLKN 323
E ++
Sbjct: 298 GEEYTRD 304
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 70.0 bits (172), Expect = 8e-14
Identities = 48/229 (20%), Positives = 88/229 (38%), Gaps = 26/229 (11%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIF---AAKFIPVSHNL-EKELIRKEIDIMNQLHHPKL 167
E IG G FG V+ A K + ++ E E IM HP +
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 168 INLHDA-FEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKH 226
++L + +++ ++ G+L I + + ++I Q + +K+
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF-----GLQVAKGMKY 143
Query: 227 MHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFA-----AP 281
+ K +H D+ N M + + VK+ DFGLA + E + T A
Sbjct: 144 LASKKFVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 282 E-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
E + + +T D+W+ GVL + L++ G P+ N + +
Sbjct: 202 ESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 246
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM
related cell adhesion molecule, fibronectin type III
domain, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 127
Score = 66.2 bits (162), Expect = 9e-14
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 4 WIRVGNTRFT-TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
W T T A LSP Y FRV A N G+S PS S+ TK
Sbjct: 64 WHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKA 113
>2crm_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 120
Score = 66.3 bits (162), Expect = 9e-14
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 1 MSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
+ W + + L+PG Y RVY + G+S S + + T
Sbjct: 63 GNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 112
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 70.0 bits (172), Expect = 1e-13
Identities = 60/245 (24%), Positives = 102/245 (41%), Gaps = 38/245 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIMNQL- 162
+ +G GAFG V G I + + V +H E+E + E+ +++ L
Sbjct: 27 FGKTLGAGAFGKVVEATAY--GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGEL--FERITAPDYKMS-------EAEVIPVTL 213
+H ++NL A ++I E+ G+L F R + S E + + + L
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 214 PILMT---QTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVK 270
L++ Q + + + KN IH D+ NI+ K+ DFGLA + +
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR--ITKICDFGLARDIKNDSNYV 202
Query: 271 ISTGTA---EFAAPE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAG-ENDVETL 321
+ ++ APE I YT D+W+ G+ + L S G SP+ G D +
Sbjct: 203 VKGNARLPVKWMAPESIFN----CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258
Query: 322 KNVKA 326
K +K
Sbjct: 259 KMIKE 263
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 121
Score = 66.2 bits (162), Expect = 1e-13
Identities = 11/52 (21%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 4 WIRVGNT--RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ + + + T++ + GL P Y+FR+ A N G+ S ++ ++ ++
Sbjct: 65 TVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 70.2 bits (172), Expect = 1e-13
Identities = 47/234 (20%), Positives = 85/234 (36%), Gaps = 36/234 (15%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
E IG G FG V+ K I + + E IM
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLT-EGIIMKDF 147
Query: 163 HHPKLINLHDA-FEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTS 221
HP +++L + +++ ++ G+L I + + ++I Q +
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF-----GLQVA 202
Query: 222 PAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEFA-- 279
+K + K +H D+ N M + + VK+ DFGLA + E + T
Sbjct: 203 KGMKFLASKKFVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGAKLPV 260
Query: 280 ---APE-IVEREPVGFYT---DMWAVGVLAYVLLS-GLSPFAGENDVETLKNVK 325
A E + + +T D+W+ GVL + L++ G P+ N + +
Sbjct: 261 KWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 310
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain,
structural genomics., NPPSFA; NMR {Homo sapiens}
Length = 120
Score = 65.5 bits (160), Expect = 2e-13
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 2 SSWIRVG-NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
W V + T+ IT L G++Y FRV++EN+ G S+ +T +
Sbjct: 62 MEWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVI 112
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91,
TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 110
Score = 64.8 bits (158), Expect = 2e-13
Identities = 15/52 (28%), Positives = 21/52 (40%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ V + T + GL Y RV A N G S S T L T++ +
Sbjct: 54 GQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGS 105
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 68.8 bits (169), Expect = 2e-13
Identities = 50/256 (19%), Positives = 98/256 (38%), Gaps = 56/256 (21%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
+ + +G G FG V + A + V S + ++L+ E +++ Q+
Sbjct: 27 LGKTLGEGEFGKVVKAT--AFHLKGRAGYTTVAVKMLKENASPSELRDLLS-EFNVLKQV 83
Query: 163 HHPKLINLHDAFEDDDEMVLIFEFLSGGEL---------------FERITAPDYKMSEAE 207
+HP +I L+ A D ++LI E+ G L + + +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 208 VIPVTLPILM---TQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLD 264
+T+ L+ Q S ++++ E ++H D+ NI+ +K+ DFGL+ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR--KMKISDFGLSRDVY 201
Query: 265 PNEVVKISTGTAEFAAPEIVEREPV----------GFYT---DMWAVGVLAYVLLS-GLS 310
+ + R PV YT D+W+ GVL + +++ G +
Sbjct: 202 EEDSYVKRSQG----------RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 311 PFAGENDVETLKNVKA 326
P+ G +K
Sbjct: 252 PYPGIPPERLFNLLKT 267
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK
protein, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
SCOP: b.1.2.1
Length = 120
Score = 65.0 bits (158), Expect = 3e-13
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 1 MSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
M S+ + T + GL P Y+FR+ + G + S + TT++
Sbjct: 63 MHSYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY
acidic protein fold, fibronectin type III fold, hormone-
growth factor complex; NMR {Homo sapiens}
Length = 680
Score = 67.7 bits (164), Expect = 1e-12
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 1 MSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ W V T + +T + P Y+FRV A NV+G + S +
Sbjct: 211 ATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKD 263
Score = 43.8 bits (102), Expect = 6e-05
Identities = 11/113 (9%), Positives = 25/113 (22%), Gaps = 3/113 (2%)
Query: 4 WIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQY 63
G T + + LS +Y+ V S K + K
Sbjct: 453 EASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIG 512
Query: 64 DFDETGKKIRGKADEKVSDYDQYVFDIYSKYVP---QPVDIKTSSVYDHYDIL 113
E G + + + ++ + + + +
Sbjct: 513 CLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVT 565
Score = 42.3 bits (98), Expect = 2e-04
Identities = 6/40 (15%), Positives = 11/40 (27%), Gaps = 2/40 (5%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+ + L P Y V G + + T +
Sbjct: 594 YVLTVPNLRPSTLYRLEVQVLTPGGEGPATIKT--FRTPE 631
Score = 38.8 bits (89), Expect = 0.002
Identities = 8/54 (14%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 2 SSWIRVGNT--RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ R T ++ + L P Y + A +G++ + + T
Sbjct: 321 TKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTST 374
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 65.0 bits (159), Expect = 5e-12
Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 51/251 (20%)
Query: 112 ILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV---------SHNLEKELIRKEIDIMNQL 162
+ + +G GAFG V G A V +H+ + L+ E+ I+ +
Sbjct: 31 LGKPLGRGAFGQVIEA--DAFGIDKTATCRTVAVKMLKEGATHSEHRALMS-ELKILIHI 87
Query: 163 -HHPKLINLHDA-FEDDDEMVLIFEFLSGGEL--FERITAPDYKMSEAEVIPVTLPIL-- 216
HH ++NL A + +++I EF G L + R ++ + + L
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 217 ------MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVK 270
Q + ++ + + IH D+ NI+ +N VK+ DFGLA + +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPDYV 205
Query: 271 ISTGTAEFAAPEIVEREPV----------GFYT---DMWAVGVLAYVLLS-GLSPFAG-E 315
R P+ YT D+W+ GVL + + S G SP+ G +
Sbjct: 206 RKGDA----------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 316 NDVETLKNVKA 326
D E + +K
Sbjct: 256 IDEEFCRRLKE 266
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 65.1 bits (159), Expect = 5e-12
Identities = 32/209 (15%), Positives = 65/209 (31%), Gaps = 36/209 (17%)
Query: 100 DIKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNI--------FAAKFIPVSHNLEKEL 151
+ T + + G+++ T F+ K L E
Sbjct: 34 TVLTDKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQ 93
Query: 152 I-------RKEIDIMNQLHHPKLI---NLHDAFEDDDEM-VLIFEFL--SGGELFERITA 198
+++ +L+ L+ D+ L+ L S + +
Sbjct: 94 NFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDV--S 151
Query: 199 PDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFG 258
P + +SE V+ + + A++ +HE +H +V ENI + + V + +G
Sbjct: 152 PKHVLSERSVL-----QVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYG 206
Query: 259 LATK-LDPNEVVKIS-------TGTAEFA 279
A + + V G EF
Sbjct: 207 FAFRYCPSGKHVAYVEGSRSPHEGDLEFI 235
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1,
midin-2, ring finger protein 60, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 127
Score = 61.5 bits (149), Expect = 6e-12
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
SW+ V N + + GL G +Y F V A N G + T ++
Sbjct: 69 DSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin
domain, fibronectin type III repeat, CE adhesion; 1.80A
{Homo sapiens}
Length = 215
Score = 63.3 bits (154), Expect = 7e-12
Identities = 14/50 (28%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 1 MSSWIRVGNTRF-TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 49
S W + I GL P Y R+ A N G + S S+ T
Sbjct: 160 HSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 209
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III
repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP:
b.1.2.1
Length = 105
Score = 60.5 bits (147), Expect = 7e-12
Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 1 MSSWIRVG-NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
S W + + I GL P Y R+ A N G + S S+ T
Sbjct: 53 HSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 103
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3,
immunoglobulin-like beta- sandwich fold, KIAA0970,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 106
Score = 60.0 bits (146), Expect = 1e-11
Identities = 14/49 (28%), Positives = 17/49 (34%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
S + I GLSP Y RV A +V G S +T
Sbjct: 50 GSMQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTP 98
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein
binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP:
b.1.2.1
Length = 115
Score = 60.3 bits (146), Expect = 1e-11
Identities = 12/50 (24%), Positives = 18/50 (36%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ T ++T L P H Y FR+ A + S TS +
Sbjct: 60 KPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQ 109
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding;
2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
PDB: 2ibb_A
Length = 214
Score = 62.5 bits (152), Expect = 1e-11
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
T ++T L P H Y FR+ A + S TS +
Sbjct: 70 FTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPG 110
Score = 57.1 bits (138), Expect = 8e-10
Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 2 SSWIR--VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ + + + I L YEF++ + + S+ S T +
Sbjct: 161 GEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1,
NCAM-120, CD56 antigen, membra protein, glycoprotein,
structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo
sapiens}
Length = 122
Score = 60.2 bits (146), Expect = 1e-11
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
+ I GL P Y R+ A N G + S S+ T
Sbjct: 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 104
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A
{Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Length = 205
Score = 62.0 bits (151), Expect = 1e-11
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 2 SSWIRVGNT--RFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+SW + + +SP Y FRV A N G S PS SD TT+
Sbjct: 49 ASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQP 101
Score = 46.2 bits (110), Expect = 3e-06
Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 2 SSWIR--VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
++W + + R + I +Y +V A N G S+ + + +
Sbjct: 151 AAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYS 201
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 63.0 bits (154), Expect = 2e-11
Identities = 50/224 (22%), Positives = 86/224 (38%), Gaps = 55/224 (24%)
Query: 116 IGTGAFGVVHRCRERKTGNIFAAK-----FIPVSHNLEKELIRKEIDIMNQLHHPKLINL 170
+G G FGVV++ A K + L+++ + EI +M + H L+ L
Sbjct: 39 MGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQ-EIKVMAKCQHENLVEL 95
Query: 171 HDAFEDDDEMVLIFEFLSGG----ELFERITAPDYKMSEAEVIPVTLP------ILMTQT 220
D D++ L++ ++ G L P L I
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP------------PLSWHMRCKI----- 138
Query: 221 SPAV------KHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST- 273
A +HE + IH D+K NI+ + K+ DFGLA + +++
Sbjct: 139 --AQGAANGINFLHENHHIHRDIKSANILLD--EAFTAKISDFGLARASEKFAQTVMTSR 194
Query: 274 --GTAEFAAPEIVEREPVGFYT---DMWAVGVLAYVLLSGLSPF 312
GT + APE + G T D+++ GV+ +++GL
Sbjct: 195 IVGTTAYMAPEALR----GEITPKSDIYSFGVVLLEIITGLPAV 234
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 62.3 bits (152), Expect = 5e-11
Identities = 54/255 (21%), Positives = 96/255 (37%), Gaps = 53/255 (20%)
Query: 112 ILEEIGTGAFGVVHRCR-----ERKTGNIFAAKFIPVSHNLE--KELIRKEIDIMNQL-H 163
+ +G+GAFG V + A K + + + L+ E+ +M QL
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS-ELKMMTQLGS 107
Query: 164 HPKLINLHDAFEDDDEMVLIFEFLSGGEL--------------FERITAPDYKMSEAEVI 209
H ++NL A + LIFE+ G+L E ++
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 210 PVTLPILMT---QTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPN 266
+T L+ Q + ++ + K+ +H D+ N++ VK+ DFGLA + +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK--VVKICDFGLARDIMSD 225
Query: 267 EVVKISTGTAEFAAPEIVEREPV----------GFYT---DMWAVGVLAYVLLS-GLSPF 312
+ R PV G YT D+W+ G+L + + S G++P+
Sbjct: 226 SNYVVRGNA----------RLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
Query: 313 AG-ENDVETLKNVKA 326
G D K ++
Sbjct: 276 PGIPVDANFYKLIQN 290
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III
module, beta-sheet sandwich, cell membrane,
glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Length = 114
Score = 58.3 bits (141), Expect = 5e-11
Identities = 10/51 (19%), Positives = 18/51 (35%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQY 63
+ + L YE ++ A N G S+P+ + K K +
Sbjct: 64 DHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIKDHHHHHH 114
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 120
Score = 57.8 bits (140), Expect = 9e-11
Identities = 12/51 (23%), Positives = 20/51 (39%)
Query: 3 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ + I L P Y FRV A+N +G + S + T ++
Sbjct: 65 RVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPES 115
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 60.7 bits (148), Expect = 1e-10
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 116 IGTGAFGVVHRCRERKTGNIFAAK-FIPVSHNLEKELIRKEIDIMNQLHHPKLINLHDAF 174
IG G FG V++ + G A K P S +E EI+ ++ HP L++L
Sbjct: 47 IGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEEF-ETEIETLSFCRHPHLVSLIGFC 104
Query: 175 EDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVK---HMHEKN 231
++ +EM+LI++++ G L + D + ++ + A + ++H +
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSD-----LPTMSMSWEQRLEICIGAARGLHYLHTRA 159
Query: 232 IIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST---GTAEFAAPE 282
IIH DVK NI+ + K+ DFG++ K + +ST GT + PE
Sbjct: 160 IIHRDVKSINILLD--ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPE 211
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain,
immunoglobulin superfamily, transmembrane,
phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A
{Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Length = 389
Score = 57.9 bits (140), Expect = 1e-09
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 2 SSWIRV-GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
W V + T + + L P YE RV A N G+ D S T
Sbjct: 240 EIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVR 292
Score = 53.7 bits (129), Expect = 4e-08
Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 2 SSWIRVGNTRF--TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ + + L YE ++ A N G S+P+ + K
Sbjct: 336 EDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK 387
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor;
2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A
1lwr_A
Length = 209
Score = 55.6 bits (134), Expect = 3e-09
Identities = 13/53 (24%), Positives = 17/53 (32%), Gaps = 5/53 (9%)
Query: 2 SSWIRVGNTRF-----TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 49
W + I GL P Y R+ A N G + S S+ T
Sbjct: 52 EVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 104
Score = 53.3 bits (128), Expect = 2e-08
Identities = 11/52 (21%), Positives = 16/52 (30%), Gaps = 2/52 (3%)
Query: 2 SSWIRVGNTRF--TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
S W + + L +YE V AEN G+S +
Sbjct: 152 SEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAAA 203
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 119
Score = 53.2 bits (128), Expect = 4e-09
Identities = 11/51 (21%), Positives = 19/51 (37%)
Query: 3 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ + + L P Y FRV A N +G + S + T ++
Sbjct: 64 RALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPES 114
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus
design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Length = 98
Score = 52.0 bits (125), Expect = 5e-09
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTF 54
+ V + T++ ITGL+PG +Y VYA S P + T
Sbjct: 45 PKELTVPPSS-TSVTITGLTPGVEYVVSVYALKDNQESPPLVGT-QTTGGHHH 95
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 118
Score = 52.4 bits (126), Expect = 7e-09
Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 8/55 (14%)
Query: 2 SSWIRV-----GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
R+ T + L P H Y FRV A++ G I ++
Sbjct: 60 GELHRLNIPNPAQTSVV---VEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQ 111
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de
novo; 2.50A {Synthetic}
Length = 98
Score = 50.5 bits (121), Expect = 2e-08
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 4 WIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
+ V + + +TGL PG +Y +Y RS+P + TT
Sbjct: 47 NLTVPGSE-RSYDLTGLKPGTEYTVSIYGVKGGHRSNPLSAE--FTT 90
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative
splicing, cell adhesion, coiled coil, EGF-like domain,
extracellular matrix; 2.40A {Homo sapiens}
Length = 100
Score = 50.1 bits (120), Expect = 3e-08
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
T++ +T L P YE R+ A N S P +T+ TT
Sbjct: 55 TSLTLTNLEPNTTYEIRIVARNGQQYSPPVSTT--FTT 90
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural
genomics, riken structural genomics/proteomics
initiative, cell adhesion; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 108
Score = 50.3 bits (120), Expect = 3e-08
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
T + + GL YEFR+ A SDPS T+++ T+
Sbjct: 63 TELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTS 100
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 53.4 bits (129), Expect = 3e-08
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 29/212 (13%)
Query: 116 IGTGAFGVVHRCRERKTGNIFAAKFIPV--SHNLEKELIRKEIDIMNQLHHPKLINLHDA 173
+G G FG V++ R G + A K + + E + E+++++ H L+ L
Sbjct: 38 LGRGGFGKVYKGR-LADGTLVAVKRLKEERTQGGELQFQT-EVEMISMAVHRNLLRLRGF 95
Query: 174 FEDDDEMVLIFEFLSGG----ELFERITAPDYKMSEAEVIPVTLPILM---TQTSPAVKH 226
E +L++ +++ G L ER P+ P ++ + +
Sbjct: 96 CMTPTERLLVYPYMANGSVASCLRER---------PESQPPLDWPKRQRIALGSARGLAY 146
Query: 227 MHEK---NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKIST---GTAEFAA 280
+H+ IIH DVK NI+ + DFGLA KL + ++T GT A
Sbjct: 147 LHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIA 203
Query: 281 PEIVEREPVGFYTDMWAVGVLAYVLLSGLSPF 312
PE + TD++ GV+ L++G F
Sbjct: 204 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein;
NMR {Homo sapiens} PDB: 2h45_A
Length = 95
Score = 49.4 bits (118), Expect = 4e-08
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 3 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 49
++ + +T T++ I L PG +Y VY + G ++ T
Sbjct: 50 QYLDLPSTA-TSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 95
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: b.1.2.1
Length = 107
Score = 49.7 bits (119), Expect = 5e-08
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 2 SSWIRV-GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+ + +TGL G Y FR+ A+N G + + T +D
Sbjct: 50 ARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKE-IRTPED 100
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 123
Score = 49.5 bits (118), Expect = 7e-08
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
S+ + +T + TGL P YEF V S S T+ T +
Sbjct: 67 SAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 52.6 bits (126), Expect = 7e-08
Identities = 56/285 (19%), Positives = 97/285 (34%), Gaps = 71/285 (24%)
Query: 112 ILEEIGTGAFGVVHRCR-----ERKTGNIFAAKFIPVSHNL-EKELIRKEIDIMNQL-HH 164
+ + +G GAFG V + T A K + E + E+ I+ + HH
Sbjct: 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85
Query: 165 PKLINLHDA-FEDDDEMVLIFEFLSGGEL------------------FERITAPDYKMSE 205
++NL A + +++I EF G L DY +
Sbjct: 86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 145
Query: 206 AEVIPVTLPIL-MTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFG------ 258
+ L + +Q+S + + EK++ ++ + T +I +
Sbjct: 146 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 205
Query: 259 ---LATK-------------LDPNEVVKIS----------------TGTAEF----AAPE 282
LA++ L VVKI G A APE
Sbjct: 206 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265
Query: 283 IVEREPVGFYTDMWAVGVLAYVLLS-GLSPFAG-ENDVETLKNVK 325
+ +D+W+ GVL + + S G SP+ G + D E + +K
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 310
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 94
Score = 48.6 bits (116), Expect = 8e-08
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
T + GL PG +Y V A + S P + +T
Sbjct: 55 DTAELQGLRPGSEYTVSVVALHDDMESQPLIGT--QST 90
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase
receptor HTK, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 109
Score = 48.6 bits (116), Expect = 1e-07
Identities = 12/50 (24%), Positives = 16/50 (32%)
Query: 3 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
S +R T + GL G Y +V A + G T D
Sbjct: 54 SSVRFLKTSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLD 103
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A
{Homo sapiens} PDB: 1fnh_A
Length = 290
Score = 51.0 bits (122), Expect = 2e-07
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
+++ ++GL +YE VYA S P+
Sbjct: 74 SSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLE 111
Score = 50.2 bits (120), Expect = 3e-07
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
+ ITGL PG Y+ +Y N RS P
Sbjct: 165 RSYTITGLQPGTDYKIYLYTLNDNARSSPVVID 197
Score = 49.4 bits (118), Expect = 6e-07
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
+ T ITGL PG +Y V A +S+P T
Sbjct: 244 REVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIGR--KKT 290
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 108
Score = 48.2 bits (115), Expect = 2e-07
Identities = 13/45 (28%), Positives = 15/45 (33%), Gaps = 4/45 (8%)
Query: 8 GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
GN + LS Y RV G S T +TTK
Sbjct: 57 GNATSAM--LGPLSSSTTYTVRVTCLYPGGGSSTLTGR--VTTKK 97
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell
adhesion, coiled coil, EGF-like domain, extracellular
matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A
1ten_A
Length = 104
Score = 47.8 bits (114), Expect = 2e-07
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 3 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ I + +I L P +YE + + S+P+ + TT
Sbjct: 47 TTIDLTEDE-NQYSIGNLKPDTEYEVSLISRRGDMSSNPAKET--FTTG 92
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type
III domain containing protein, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 115
Score = 47.7 bits (114), Expect = 2e-07
Identities = 11/52 (21%), Positives = 19/52 (36%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
R+ T+ + GL P Y FR+ A + G + T + +
Sbjct: 59 GEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 105
Score = 47.5 bits (113), Expect = 2e-07
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
T+ + GL P Y R+ A P +TS TT
Sbjct: 59 TSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTS--FTT 94
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 105
Score = 47.4 bits (113), Expect = 3e-07
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 5 IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
+ V R + + + L +Y V A GRS+ + +
Sbjct: 54 VSVPGAR-SHVTLPDLQAATKYRVLVSAIYAAGRSEAVSAT 93
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer,
neovascularization, cell adhesion, protein binding,
oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Length = 203
Score = 49.4 bits (118), Expect = 3e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
+TGL PG Y+ VY G S P+T +
Sbjct: 77 GYYTVTGLEPGIDYDISVYTVKNGGESTPTTLT 109
Score = 46.4 bits (110), Expect = 3e-06
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
+ +T L PG +Y V + S P T
Sbjct: 168 NAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR--QKT 203
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 50.3 bits (119), Expect = 3e-07
Identities = 45/314 (14%), Positives = 88/314 (28%), Gaps = 83/314 (26%)
Query: 108 DHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPV--------SHNLEKELIRKEIDIM 159
+ E+IG G FG V + A K I + SH E I EI I
Sbjct: 20 EKLQRCEKIGEGVFGEVFQT--IADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIIS 77
Query: 160 NQLH---------HPKLINLHDAF------------------------------EDDDEM 180
+L I L+ DD++
Sbjct: 78 KELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQL 137
Query: 181 VLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEK-NIIHLDVKP 239
++ EF GG E++ ++ A+ I + Q + ++ H D+
Sbjct: 138 FIVLEFEFGGIDLEQMRTKLSSLATAKSI-------LHQLTASLAVAEASLRFEHRDLHW 190
Query: 240 ENIMCQTRNSTN------------------VKMIDFGLATKLDPNEVVKISTGTAEFAAP 281
N++ + + V +ID+ L+ VV
Sbjct: 191 GNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDV----SMDE 246
Query: 282 EIVEREPVGFYTDMWAVGVLAYVLLSGLSPFAG----ENDVETLKNVKACDWEFDEEAFK 337
++ + + + P++ + + + + A K
Sbjct: 247 DLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMK 306
Query: 338 NVSEEGKDFIRRLL 351
+ + ++F R +L
Sbjct: 307 QIKRKIQEFHRTML 320
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular
matrix, adhesion, fusion protein, structural protein;
2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Length = 186
Score = 49.0 bits (117), Expect = 4e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
T+ + GL G +Y + AE +S P+T
Sbjct: 58 TSFILRGLDAGTEYTISLVAEKGRHKSKPTTIK 90
Score = 46.3 bits (110), Expect = 3e-06
Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
T + L PG Y + + + S+P + + T
Sbjct: 147 TRTKLVKLVPGVDYNVNIISVKGFEESEPISGI--LKTA 183
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 104
Score = 46.4 bits (110), Expect = 6e-07
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Query: 5 IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
++VG + GL PG YE V + S+
Sbjct: 56 VQVGRPEVL---LDGLEPGRDYEVSVQSLRGPEGSEARGIR 93
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 116
Score = 46.6 bits (111), Expect = 7e-07
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
V + + I GL +Y FRV A N +G + + T D
Sbjct: 61 DKEQDV-DVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins,
protein-protein interactions, C-type lectin domain;
2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Length = 283
Score = 49.0 bits (117), Expect = 7e-07
Identities = 12/44 (27%), Positives = 17/44 (38%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
S T+ +T L PG +Y + AE +S ST
Sbjct: 237 ISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVD 280
Score = 49.0 bits (117), Expect = 7e-07
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ R+ + ++ L PG +YE + A SD S+T TT+
Sbjct: 58 KTTFRLQPPL-SQYSVQALRPGSRYEVSISAVRGTNESDASSTQ--FTTE 104
Score = 48.3 bits (115), Expect = 1e-06
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
+ G T +T L PG +Y + A +S P+T +
Sbjct: 149 EVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMN 192
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III
domain, oncofetal splice VARI extra-domain B, EIIIB,
ED-B, angiogenesis, integrin; 2.40A {Homo sapiens}
Length = 375
Score = 49.4 bits (118), Expect = 7e-07
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
RV ++R ++ +T L+PG +Y + A N S
Sbjct: 321 PREDRVPHSR-NSITLTNLTPGTEYVVSIVALNGREESPLLIGQ 363
Score = 47.1 bits (112), Expect = 4e-06
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
+TGL PG Y+ V G S P+T +
Sbjct: 150 GYYTVTGLEPGIDYDISVITLINGGESAPTTLT 182
Score = 47.1 bits (112), Expect = 5e-06
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTT 44
+S V + ++ LSPG +Y VY S P +
Sbjct: 48 NSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISD 90
Score = 46.0 bits (109), Expect = 9e-06
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
+ +T L PG +Y V + S P
Sbjct: 241 NAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR 273
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 137
Score = 46.9 bits (111), Expect = 9e-07
Identities = 11/46 (23%), Positives = 16/46 (34%)
Query: 4 WIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 49
+ V T + + L P Y +V AE + PS T
Sbjct: 73 YKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTT 118
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken
structural genomics/proteomics initiative, RSGI; NMR
{Homo sapiens} SCOP: b.1.2.1
Length = 130
Score = 46.2 bits (110), Expect = 1e-06
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
++ + V TGL P Y FR+ A+ G + + + T K +
Sbjct: 74 TATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRS 125
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY
docking, cell adhesion, structural protein; NMR {Homo
sapiens}
Length = 201
Score = 47.3 bits (112), Expect = 1e-06
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
T++ I L PG +Y VY + G ++ TT
Sbjct: 165 TSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTS-QTT 201
Score = 46.2 bits (109), Expect = 4e-06
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ I GL PG YE ++ + YG + + T+
Sbjct: 56 NSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTST 94
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 112
Score = 45.0 bits (106), Expect = 2e-06
Identities = 5/33 (15%), Positives = 11/33 (33%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
+ + L G Y +Y ++D +
Sbjct: 70 HSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGT 102
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic,
protein-protein SH2 domain, ATP-binding, phosphoprotein;
2.10A {Homo sapiens}
Length = 103
Score = 44.7 bits (106), Expect = 2e-06
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 5 IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
V +T I+GL PG Y VYA + + + I +
Sbjct: 57 FTVPGYY-STATISGLKPGVDYTITVYAYDTFFPGYEPNSPISINYR 102
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like
modifier, S NOVO protein; 2.40A {Artificial gene}
Length = 97
Score = 44.7 bits (106), Expect = 2e-06
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 5 IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
V + +T I+GLSPG Y VYA Y S + I +
Sbjct: 51 FTVPGSS-STATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYR 96
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera
phosphorylation, transmembrane, tyrosine-protein kinase,
glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB:
2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Length = 536
Score = 48.2 bits (114), Expect = 3e-06
Identities = 11/51 (21%), Positives = 19/51 (37%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
S+ V T ++ + L+P Y +V A G+ S + T
Sbjct: 484 SNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSP 534
Score = 45.9 bits (108), Expect = 1e-05
Identities = 9/44 (20%), Positives = 15/44 (34%)
Query: 6 RVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 49
T++ ++ L P Y F V A N S + +
Sbjct: 393 PPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTAS 436
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 106
Score = 44.6 bits (106), Expect = 3e-06
Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+ + + GL +Y R A N YG + ++T D
Sbjct: 51 GKEQNIEVDG-LSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 113
Score = 44.8 bits (106), Expect = 3e-06
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ + T + + +TGL P YEF V S S T+ T + +
Sbjct: 58 TKYKNANATTLSYL-VTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELS 108
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol,
hormone-growth complex; HET: CME EST; 2.95A {Homo
sapiens}
Length = 121
Score = 44.5 bits (105), Expect = 4e-06
Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
V ++ +T I+GL PG Y VYA + I +
Sbjct: 72 VQEFTVPGSK-STATISGLKPGVDYTITVYAVTGLRLMLAGSKPISINYR 120
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein;
2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Length = 368
Score = 47.1 bits (112), Expect = 4e-06
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
+ +T L PG +Y V + S P
Sbjct: 149 NAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR 181
Score = 46.4 bits (110), Expect = 8e-06
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
+S V + ++ LSPG +Y VY S P + +
Sbjct: 47 NSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDT 90
Score = 45.2 bits (107), Expect = 2e-05
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+T I+GL PG Y VYA G S S+ I +
Sbjct: 329 STATISGLKPGVDYTITVYAVTGRGDSPASSKPISINYR 367
Score = 44.1 bits (104), Expect = 4e-05
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
++ +T L+PG +Y + A N S
Sbjct: 239 NSITLTNLTPGTEYVVSIVALNGREESPLLIGQ 271
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane,
disulfide bond, glycoprotein, immunoglobulin domain,
membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A
{Homo sapiens}
Length = 589
Score = 47.3 bits (112), Expect = 4e-06
Identities = 9/52 (17%), Positives = 13/52 (25%), Gaps = 2/52 (3%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ W + T T L+ Y V G P + K
Sbjct: 445 TDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIK--AYLKQA 494
Score = 45.4 bits (107), Expect = 2e-05
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
++ + L P +Y FR+ G+ S S+ +
Sbjct: 259 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGI 297
Score = 41.9 bits (98), Expect = 2e-04
Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ ++ T ++ L+ Y R+ A G D + T K
Sbjct: 541 NETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFT-FTTPK 589
Score = 36.1 bits (83), Expect = 0.017
Identities = 7/37 (18%), Positives = 11/37 (29%)
Query: 9 NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
+T + E V AEN G+ +
Sbjct: 154 DTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHIN 190
Score = 32.7 bits (74), Expect = 0.17
Identities = 7/37 (18%), Positives = 14/37 (37%)
Query: 9 NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
N +T +Y + N+ G+SD + +
Sbjct: 356 NYTVNATKLTVNLTNDRYLATLTVRNLVGKSDAAVLT 392
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin
type-III, beta-N-acetylglucosaminidase, cohesin,
hydrolase; 1.80A {Clostridium perfringens}
Length = 238
Score = 46.5 bits (109), Expect = 4e-06
Identities = 8/49 (16%), Positives = 16/49 (32%)
Query: 3 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ T+ L+ Y F++ A+ G + L T +
Sbjct: 190 KKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTAR 238
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma,
epidermolysis bullosa, alternative splicing, disease
mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo
sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Length = 234
Score = 46.3 bits (110), Expect = 5e-06
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
S + +++ ++ +T L P YE +V A G S+ T ++
Sbjct: 47 ESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQE 97
Score = 42.8 bits (101), Expect = 7e-05
Identities = 8/39 (20%), Positives = 12/39 (30%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ I L Y + V A N G + T+
Sbjct: 160 RMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQ 198
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic,
protein-protein SH2 domain, ATP-binding, phosphoprotein;
1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A
1fna_A
Length = 101
Score = 43.6 bits (103), Expect = 5e-06
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 5 IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
V + +T I+GLSPG Y VYA S + T
Sbjct: 53 FTVPYSS-STATISGLSPGVDYTITVYAWGEDSAGYMFMYSPISINYRT 100
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 115
Score = 44.0 bits (104), Expect = 5e-06
Identities = 6/38 (15%), Positives = 11/38 (28%), Gaps = 2/38 (5%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
+ L Y V + P++ + TT
Sbjct: 59 VDYPLHDLVLHTNYTATVRGLRGPNLTSPASIT--FTT 94
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related
receptor containing LDLR class A repeats, sorla; NMR
{Homo sapiens}
Length = 108
Score = 44.0 bits (104), Expect = 5e-06
Identities = 11/48 (22%), Positives = 15/48 (31%), Gaps = 3/48 (6%)
Query: 5 IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
R + I L Y RV A G + S + + T K
Sbjct: 58 QRAASNFTE---IKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKG 102
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase,
glycoprotein, receptor protei tyrosine phosphatase, cell
adhesion; HET: NAG; 3.10A {Homo sapiens}
Length = 731
Score = 46.3 bits (109), Expect = 9e-06
Identities = 12/54 (22%), Positives = 14/54 (25%), Gaps = 2/54 (3%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENV--YGRSDPSTTSDLITTKDT 53
SW T+ I L P +YE V G P T
Sbjct: 305 GSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCAD 358
Score = 40.1 bits (93), Expect = 0.001
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
T GL PG Y F + A G P+T TTK
Sbjct: 526 THFLFFGLYPGTTYSFTIRASTAKGFGPPATNQ--FTTK 562
Score = 37.8 bits (87), Expect = 0.006
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 3 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTT 44
SW + T IT LSP ++ N GR +
Sbjct: 414 SWDTENSHPQHT--ITNLSPYTNVSVKLILMNPEGRKESQEL 453
Score = 37.1 bits (85), Expect = 0.010
Identities = 7/45 (15%), Positives = 10/45 (22%)
Query: 9 NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
N + T L P Y A + + T
Sbjct: 661 NKTYNGYWNTPLLPYKSYRIYFQAASRANGETKIDCVQVATKGAA 705
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin
type III domain, alternative cell membrane, disulfide
bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Length = 290
Score = 45.2 bits (107), Expect = 1e-05
Identities = 8/43 (18%), Positives = 11/43 (25%)
Query: 3 SWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
W + T T L+ Y V G P +
Sbjct: 147 DWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIK 189
Score = 41.3 bits (97), Expect = 2e-04
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 9 NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
N +T +Y + N+ G+SD + + I D
Sbjct: 57 NYTVNATKLTVNLTNDRYLATLTVRNLVGKSDAAVLT--IPACD 98
Score = 38.2 bits (89), Expect = 0.003
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 9 NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
++ T ++ L+ Y R+ A G D + T K
Sbjct: 249 DSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFT-FTTPK 290
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 116
Score = 42.4 bits (100), Expect = 2e-05
Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 4/44 (9%)
Query: 8 GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
R+ + I L Y + A N G P S TT+
Sbjct: 68 SKQRYYS--IERLESSSHYVISLKAFNNAGEGVPLYES--ATTR 107
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 114
Score = 42.4 bits (100), Expect = 2e-05
Identities = 14/54 (25%), Positives = 17/54 (31%), Gaps = 5/54 (9%)
Query: 2 SSWIRV---GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
WI G+ I L+ Y FR+ A N G S T K
Sbjct: 57 DDWIMETISGDRLTHQ--IMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKV 108
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 111
Score = 42.0 bits (99), Expect = 2e-05
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
S ++ TR T ++GL PG +Y F+V A G S ++ T K
Sbjct: 58 YSTLKAVTTRAT---VSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKP 105
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 126
Score = 42.4 bits (100), Expect = 2e-05
Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 8 GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
R+ T I L P Y + A N G P S + +
Sbjct: 78 YKQRYYT--IENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTS 121
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain,
fibron type III, cell adhesion; 1.80A {Homo sapiens}
PDB: 1x5k_A
Length = 211
Score = 42.9 bits (101), Expect = 5e-05
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+ + T + + +TGL P YEF V S S T+ T +
Sbjct: 54 TKYKNANATTLSYL-VTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103
Score = 37.9 bits (88), Expect = 0.002
Identities = 12/44 (27%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 8 GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
GN I L+ Y F++ A N G S T K
Sbjct: 163 GNRLTHQ--IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons,
receptor chain, ifnar1, fibronect III, type I interferon
receptor chain; HET: NAG; 1.90A {Homo sapiens}
Length = 306
Score = 43.4 bits (101), Expect = 5e-05
Identities = 9/55 (16%), Positives = 15/55 (27%), Gaps = 4/55 (7%)
Query: 4 WIRVGNTRFTT----MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTF 54
W ++ + + + Y RV A + S S T F
Sbjct: 251 WKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAF 305
Score = 30.3 bits (67), Expect = 0.90
Identities = 8/36 (22%), Positives = 12/36 (33%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYG 37
S ++ I LSP Y +V A +
Sbjct: 148 SGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTS 183
Score = 29.9 bits (66), Expect = 1.2
Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 6/58 (10%)
Query: 1 MSSWIRVG---NTRFTTMAIT--GLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
M +WI++ N T + L+ + + R+ AE S +
Sbjct: 44 MDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKA 100
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A
{Clostridium thermocellum}
Length = 103
Score = 40.9 bits (96), Expect = 5e-05
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 7 VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 49
+ +T +T TG++ G +Y + V A + + S + L
Sbjct: 54 ITSTNYT---DTGVATGTKYYYVVSAVSNGVETLNSAEAILQY 93
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 43.9 bits (103), Expect = 8e-05
Identities = 64/349 (18%), Positives = 113/349 (32%), Gaps = 134/349 (38%)
Query: 3 SWIRVGNTRFTTMAIT----GLSPGHQYEFRVYAENVYGRSDPSTTSDLIT--------T 50
S +G + +T G +PG E R Y + G S L+T +
Sbjct: 237 SCPLIGVIQLAHYVVTAKLLGFTPG---ELRSYLKGATGHS-----QGLVTAVAIAETDS 288
Query: 51 KDTFKKQIKK-------------RQY-----------DFDETGKK-------IRGKADEK 79
++F ++K Y D E + I E+
Sbjct: 289 WESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQ 348
Query: 80 VSDYDQYVFDIYSKYVPQPVDIKTSSV--YDHYDILEEIGTGA----FGVVHRCR----- 128
V DY + ++P ++ S V + ++ +G +G+ R
Sbjct: 349 VQDYVNKT----NSHLPAGKQVEISLVNGAKNL-VV----SGPPQSLYGLNLTLRKAKAP 399
Query: 129 -----------ERKTGNIFAAKFIPVS---H---------NLEKELIRKEIDIM-NQLHH 164
ERK F+ +F+PV+ H + K+L++ + +
Sbjct: 400 SGLDQSRIPFSERKL--KFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQI 457
Query: 165 PKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAV 224
P ++D F+ D VL G + ERI + I + LP+ T
Sbjct: 458 P----VYDTFDGSDLRVL------SGSISERI---------VDCI-IRLPVKWETT---- 493
Query: 225 KHMHEKNIIH-LDVKP------ENIMCQTRNSTNVKMIDFGLATKLDPN 266
+ H LD P + + ++ T V++I +A LD N
Sbjct: 494 ---TQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVI---VAGTLDIN 536
Score = 40.0 bits (93), Expect = 0.001
Identities = 43/222 (19%), Positives = 73/222 (32%), Gaps = 69/222 (31%)
Query: 108 DHYDILEEIGTGAFGVVHRCRER-KTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPK 166
D Y EE+ R+ +T ++ I S ELIR +D + +
Sbjct: 167 DDY--FEEL-----------RDLYQTYHVLVGDLIKFSAETLSELIRTTLDA--EKVFTQ 211
Query: 167 LINLHDAFEDDDEMVLIFEFLSGGELFERITAPD--YKMSEAEVIPVTLP-ILMTQTSPA 223
+N+ + E+ PD Y +S IP++ P I + Q +
Sbjct: 212 GLNILEWLENPS------------------NTPDKDYLLS----IPISCPLIGVIQLA-- 247
Query: 224 VKHMHEKNIIH-LDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVVKISTGTAEF--AA 280
H L P + + +T GL T + + + F +
Sbjct: 248 ----HYVVTAKLLGFTPGELRSYLKGATGHSQ---GLVTAV----AIAETDSWESFFVSV 296
Query: 281 PEIVEREPVGFYTDMWAVGV---LAYVLLSGLSPFAGENDVE 319
+ + V F+ +GV AY S L P E+ +E
Sbjct: 297 RKAIT---VLFF-----IGVRCYEAYPNTS-LPPSILEDSLE 329
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain,
carbohydrase, horizontal gene transfer, hydrolase; NMR
{Bacillus circulans} SCOP: b.1.2.1
Length = 88
Score = 39.6 bits (93), Expect = 9e-05
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 6 RVGNTRFTTMAITGLSPGHQYEFRVYAENVYG-RSDPSTT 44
TT I+GL+ Y F V A++ G S S
Sbjct: 44 LATTVTGTTATISGLAADTSYTFTVKAKDAAGNVSAASNA 83
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2,
NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 108
Score = 40.1 bits (94), Expect = 1e-04
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 6 RVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+ ++ T I GL PG Y +V A V G S T D
Sbjct: 56 SMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD 102
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK,
fibronectin type III (FN3) domain, structural genomics,
NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Length = 107
Score = 39.4 bits (92), Expect = 2e-04
Identities = 9/40 (22%), Positives = 13/40 (32%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+ +T L P Y RV G S + T+
Sbjct: 62 PRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 101
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken
structural genomics/proteomics initiative, RSGI; NMR
{Homo sapiens} SCOP: b.1.2.1
Length = 119
Score = 39.3 bits (92), Expect = 2e-04
Identities = 9/48 (18%), Positives = 14/48 (29%), Gaps = 3/48 (6%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYG---RSDPSTTSD 46
+ +TGL+ Y V A G S + +S
Sbjct: 63 TRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSG 110
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 120
Score = 38.3 bits (89), Expect = 6e-04
Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 2 SSWIR--VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
SSW + + L G YE +V + S + + TT+++
Sbjct: 62 SSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein,
adnect antitumor, drug, engineered binding protein;
HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Length = 114
Score = 37.6 bits (87), Expect = 0.001
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
T I+GL PG Y VYA + +
Sbjct: 57 HTATISGLKPGVDYTITVYAVTDHKPHADGPHT 89
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes
(CDON)binding...; fibronectin type III, FN3; NMR {Mus
musculus} SCOP: b.1.2.1
Length = 114
Score = 37.1 bits (86), Expect = 0.001
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Query: 2 SSWIRV---GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
S + + G+ + + I+ L P Y+ ++ N G S+ S T
Sbjct: 57 SDYKKDMVEGDRYWHS--ISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 107
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III
module, structural protein; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 98
Score = 36.7 bits (84), Expect = 0.002
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 17 ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
I GL PG YE ++ + YG + T D TT
Sbjct: 65 IKGLKPGVVYEGQLISIQQYGHQE-VTRFDFTTT 97
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor
complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1 b.1.2.1 PDB: 1p9m_A
Length = 303
Score = 38.7 bits (89), Expect = 0.002
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Query: 2 SSWIRVGNTRF----TTMAITGLSPGHQYEFRVYAENVYGR---SDPSTTSDLITTKD 52
S+W ++ ++ + L P +Y FR+ G+ SD S + IT +D
Sbjct: 245 STWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 302
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine
6 R beta subunit, signaling protein; 2.00A {Homo
sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Length = 215
Score = 38.0 bits (88), Expect = 0.002
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
++ + L P +Y FR+ G+ S S+ +
Sbjct: 164 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGI 202
Score = 28.4 bits (63), Expect = 2.8
Identities = 8/47 (17%), Positives = 12/47 (25%), Gaps = 2/47 (4%)
Query: 9 NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFK 55
+T + E V AEN G+ + K
Sbjct: 59 DTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHIN--FDPVYKVK 103
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine
phosphatase delta, R-PTP-delta, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 121
Score = 36.6 bits (85), Expect = 0.002
Identities = 11/52 (21%), Positives = 19/52 (36%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
++W++ I L P Y +V A G S+ +IT +
Sbjct: 65 NNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGS 116
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites,
calcium, cell adhesion molecules, cell cycle cell LINE,
conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C
3n1q_C 3n1m_C 3n1g_C 3n1p_C
Length = 102
Score = 35.8 bits (83), Expect = 0.003
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Query: 8 GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
G+ ++ I L P Y+ ++ N G S+ S + TK
Sbjct: 62 GSKQWHM--IGHLQPETSYDIKMQCFNEGGESEFSNVM-ICETK 102
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine,
hormone-hormone recep complex; 2.00A {Homo sapiens} PDB:
3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B
3ew3_B 3npz_B 1f6f_B 2lfg_A
Length = 210
Score = 37.4 bits (86), Expect = 0.004
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGR-SDPSTTSDLITTKDTF 54
+ W + T I L PG +Y +V + +G S S + I F
Sbjct: 154 AEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPAT-FIQIPSDF 206
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 134
Score = 36.2 bits (84), Expect = 0.004
Identities = 9/51 (17%), Positives = 18/51 (35%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+ + ++ + GL +Y V A G S+ + T +D
Sbjct: 68 RHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 38.3 bits (88), Expect = 0.004
Identities = 34/305 (11%), Positives = 75/305 (24%), Gaps = 106/305 (34%)
Query: 4 WIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQY 63
W+ + N + L + + + DP+ TS +
Sbjct: 186 WLNLKNCNSPETVLEML------------QKLLYQIDPNWTSRS--------DHSSNIKL 225
Query: 64 DFDETGKKIRGKADEKVSDYDQY-----VFDIYSKYVPQPVDIKTSSVYDHYDILEEIGT 118
++R K Y V +++ + ++ +++
Sbjct: 226 RIHSIQAELRRLLKSK-----PYENCLLVLL----------NVQNAKAWNAFNL------ 264
Query: 119 GAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLH--HPKLINLHDAFED 176
C K + +F V D ++ H L +
Sbjct: 265 -------SC---KI--LLTTRFKQV------------TDFLSAATTTHISLDHHSMTLTP 300
Query: 177 DDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHLD 236
D+ L + + P LP + T+P + ++I
Sbjct: 301 DEVK----------SLLLKY---------LDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341
Query: 237 VKPENIMCQTRNSTNVKMIDFGLATKLDPNEV-------------VKISTGTAEFAAPEI 283
+N +I+ L L+P E I T ++
Sbjct: 342 ATWDNWK-HVNCDKLTTIIESSLN-VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399
Query: 284 VEREP 288
++ +
Sbjct: 400 IKSDV 404
Score = 35.2 bits (80), Expect = 0.031
Identities = 41/286 (14%), Positives = 84/286 (29%), Gaps = 73/286 (25%)
Query: 4 WIRVGNTRFTT---MAITGLSPG---HQYE-FRVYAENVYGRSDPSTTSDLITTKDTFKK 56
W V + TT ++ L P ++ V+ + + I T
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH-----------IPTI-LL-- 392
Query: 57 QI---KKRQYDFDETGKKIRGK--ADEKVSDYDQYVFDIYSKYVPQPVDIKT--SSVYDH 109
+ + D K+ +++ + + IY + + + S+ DH
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH 452
Query: 110 YDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLIN 169
Y+I + + + + SH I HH K I
Sbjct: 453 YNIPKTFDSDDLIPPY-----LDQYFY-------SH------------IG---HHLKNIE 485
Query: 170 LHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPIL------MTQTSPA 223
+ + L F FL +I + + I TL L + P
Sbjct: 486 HPERMTLFRMVFLDFRFLEQ-----KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPK 540
Query: 224 VKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDPNEVV 269
+ + I+ K E + ++ T++ + L + +E +
Sbjct: 541 YERL-VNAILDFLPKIEENLICSK-YTDL--LRIAL---MAEDEAI 579
Score = 32.5 bits (73), Expect = 0.25
Identities = 45/287 (15%), Positives = 89/287 (31%), Gaps = 81/287 (28%)
Query: 99 VDIKTSSVYDHY-DILEEIGTGAFGVVHRCRERKTGNIFAAKFIP------VSHNLEKEL 151
+D +T Y DIL +F F+ V + L
Sbjct: 7 MDFETGEHQYQYKDILS--------------------VFEDAFVDNFDCKDVQDMPKSIL 46
Query: 152 IRKEIDIMNQLHHP--KLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYK--MSEAE 207
++EID + + L E + + +F E + +YK MS +
Sbjct: 47 SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM-VQKF------VEEVLRINYKFLMSPIK 99
Query: 208 VIPVTLPILMTQTSPAVKHMHEKNIIHLDV---KPENIMCQTRNSTNVKMIDFGLATKLD 264
P +MT+ ++ +++ ++ D N+ +R + L +L
Sbjct: 100 TEQRQ-PSMMTR-----MYIEQRDRLYNDNQVFAKYNV---SRLQP-YLKLRQAL-LELR 148
Query: 265 PNEVVKI--------STGTAEFAAPEIVERE-PVGFYTDMWA-VGVLAYVLLSGLSPFAG 314
P + V I + + V+ + + W + + SP
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF---WLNLK-------NCNSP--- 195
Query: 315 ENDVETLKNVKA---CDWEFDEEAFKNVS---EEGKDFIRRLLLRNK 355
E +E L+ + +W + N+ + +RRLL
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor
complex, alpha helical cytokin beta sandwhich receptor
fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Length = 206
Score = 37.0 bits (85), Expect = 0.005
Identities = 11/56 (19%), Positives = 15/56 (26%), Gaps = 4/56 (7%)
Query: 2 SSWIRVG---NTRFTTMAIT-GLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
WI T +T ++ Y RV A S S + T
Sbjct: 53 HIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRQST 108
Score = 32.7 bits (74), Expect = 0.11
Identities = 6/56 (10%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 4 WIRVGNTRFTTMAITGLSPGHQYEFRVYA--ENVYGRSDPSTTSDLITTKDTFKKQ 57
+++ + + + + PG Y + + + S S T + + + +
Sbjct: 151 HVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIEGR 206
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain,
cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond,
glycoprotein, membrane; 2.14A {Homo sapiens}
Length = 201
Score = 36.6 bits (84), Expect = 0.005
Identities = 10/37 (27%), Positives = 13/37 (35%)
Query: 9 NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
T T + LS + RV AE SD +
Sbjct: 49 QTTLTECDFSSLSKYGDHTLRVRAEFADEHSDWVQIT 85
Score = 31.2 bits (70), Expect = 0.35
Identities = 8/46 (17%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 9 NTRFTTMAITGLSPGHQYEFRV--YAENVYGRSDPSTTSDLITTKD 52
++ + L P Y +V + + + S TT D
Sbjct: 151 TPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic
receptor, signal transduction cytokine; HET: NAG; 2.80A
{Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A
1gcf_A
Length = 215
Score = 36.7 bits (84), Expect = 0.006
Identities = 5/50 (10%), Positives = 13/50 (26%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+ + + + GL Y ++ S S + +
Sbjct: 161 WTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLR 210
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone
receptor/immune system complex; 3.80A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1
PDB: 3loh_E
Length = 897
Score = 37.2 bits (85), Expect = 0.007
Identities = 6/52 (11%), Positives = 16/52 (30%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
++ I+GL Y + A N + + + ++ +
Sbjct: 736 EHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTM 787
Score = 36.8 bits (84), Expect = 0.010
Identities = 9/50 (18%), Positives = 14/50 (28%), Gaps = 2/50 (4%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPST--TSDLIT 49
+ + GL P QY V + + SD+I
Sbjct: 538 LRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIY 587
Score = 36.8 bits (84), Expect = 0.012
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 6 RVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
R + GLSPG+ Y R+ A ++ G + + T
Sbjct: 844 RKHFALERGCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFYVT 887
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding
homology region (CHR), cell MEMB disease mutation,
glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo
sapiens}
Length = 483
Score = 37.1 bits (85), Expect = 0.008
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 4 WIRVGNTRFTTMAITGLSPGHQYEFRVYA--ENVYGRSDPSTTSDLITT 50
I+ +A+ L+P Y FR+ E + S S +TT
Sbjct: 432 TIQGVENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTT 480
Score = 32.9 bits (74), Expect = 0.15
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
T++ I LS G YE + + + +G S T +
Sbjct: 45 TSIKIPALSHG-DYEITINSLHDFGSSTSKFTLNEQNVSL 83
Score = 31.4 bits (70), Expect = 0.52
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 17 ITGLSPGHQYEFRVYAENVYGRSDPSTTSDL 47
L Y F + A N GRS + ++
Sbjct: 346 FQMLPNQEIYNFTLNAHNPLGRSQSTILVNI 376
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 36.9 bits (86), Expect = 0.009
Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 18/92 (19%)
Query: 176 DDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPILMTQTSPAVKHMHEKNIIHL 235
D D ++ +++G + I + + V +H+ ++IH
Sbjct: 410 DLDNKRIMMSYINGKLAKDVIEDN--------------LDIAYKIGEIVGKLHKNDVIHN 455
Query: 236 DVKPENIMCQTRNSTNVKMIDFGLATKLDPNE 267
D+ N + + +IDFGL + +E
Sbjct: 456 DLTTSNFIFDKD----LYIIDFGLGKISNLDE 483
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 132
Score = 35.0 bits (81), Expect = 0.009
Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+ + G + I GL G +Y FRV A + G + T +
Sbjct: 68 TETLVSGTQ--LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine
phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine
phosphatase receptor type J; NMR {Homo sapiens}
Length = 104
Score = 34.3 bits (78), Expect = 0.011
Identities = 6/33 (18%), Positives = 6/33 (18%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
I GL Y V P
Sbjct: 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQ 91
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine,
ligand-receptor complex, signaling protein-cytokin; HET:
NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Length = 313
Score = 36.4 bits (83), Expect = 0.011
Identities = 10/52 (19%), Positives = 16/52 (30%), Gaps = 2/52 (3%)
Query: 2 SSWIRVG--NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTK 51
+SW VG + GL P Y ++ S S + +
Sbjct: 253 ASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELR 304
Score = 29.1 bits (64), Expect = 2.0
Identities = 7/33 (21%), Positives = 9/33 (27%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
++ L V AEN G S
Sbjct: 162 CSIPRKHLLLYQNMGIWVQAENALGTSMSPQLC 194
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex;
HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1
Length = 247
Score = 35.9 bits (82), Expect = 0.012
Identities = 7/45 (15%), Positives = 13/45 (28%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSD 46
SW ++ + +Y FRV + S+
Sbjct: 178 HSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSE 222
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 35.7 bits (82), Expect = 0.014
Identities = 30/232 (12%), Positives = 64/232 (27%), Gaps = 54/232 (23%)
Query: 55 KKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYD-IL 113
+++ + + + D + F S Y + D I
Sbjct: 44 EEKARNILKYLSDLRVVQNRQKDYEG--STF-TFIGLSLYS-----LHRLVRSGKVDAIG 95
Query: 114 EEIGTGAFGVVHRCRERKTGNIFAAKFIPVSH------------------NLEKELIRKE 155
+ +G G V C + KF V H L R E
Sbjct: 96 KLMGEGKESAVFNCY-SEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 154
Query: 156 IDIMNQLHH---PKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVT 212
+ +L PK+ ++ E + EL ++ + +
Sbjct: 155 FRALQKLQGLAVPKVYAWEG-------NAVLMELIDAKEL------YRVRVENPDEVLDM 201
Query: 213 LPILMTQTSPAVKHMHEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLD 264
+ + + + I+H D+ N++ + +IDF + ++
Sbjct: 202 ILEEV-------AKFYHRGIVHGDLSQYNVLVSEE---GIWIIDFPQSVEVG 243
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 34.3 bits (79), Expect = 0.014
Identities = 12/46 (26%), Positives = 14/46 (30%), Gaps = 2/46 (4%)
Query: 7 VGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+ L P QY V A N G PS + T K
Sbjct: 70 TSQEYSAR--LENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKA 113
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling
complex, extracellular space, IM system receptor; HET:
NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Length = 414
Score = 35.8 bits (81), Expect = 0.018
Identities = 9/46 (19%), Positives = 12/46 (26%), Gaps = 1/46 (2%)
Query: 9 NTRFTTMAIT-GLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
N + T + Y RV A + S S T
Sbjct: 263 NVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQA 308
Score = 32.7 bits (73), Expect = 0.17
Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 6/62 (9%)
Query: 1 MSSWIRVGNTRFTT-----MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFK 55
M +WI++ + T + L+ + + R+ AE S +
Sbjct: 48 MDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQI 106
Query: 56 KQ 57
Sbjct: 107 GP 108
Score = 32.3 bits (72), Expect = 0.21
Identities = 8/45 (17%), Positives = 13/45 (28%), Gaps = 4/45 (8%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGR----SDPSTTSDLITTKDT 53
T + + L P Y + A + + S S T
Sbjct: 367 TDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPGN 411
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle,
fibronectin domain, cytokine-cytokine REC complex; HET:
NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB:
3bpl_C* 3qb7_C* 3qaz_C*
Length = 199
Score = 34.7 bits (79), Expect = 0.023
Identities = 7/45 (15%), Positives = 13/45 (28%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSD 46
SW ++ + +Y FRV + S+
Sbjct: 140 HSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSE 184
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 103
Score = 33.4 bits (77), Expect = 0.024
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPS 42
T +TGL P Y+ +V A G S
Sbjct: 64 TRFTLTGLKPDTTYDIKVRAWTSKGSGPLS 93
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor
complex LIFR LIF, cytokine RE cytokine complex; HET: NAG
FUC MAN; 4.00A {Mus musculus}
Length = 488
Score = 35.3 bits (80), Expect = 0.026
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 1 MSSWIRVGNTRFTTMAITGLSPGHQYEFRVYA--ENVYGRSDPSTTSDLITTKDT 53
++ IR +A+ L+P Y FRV + + S S +TT+ T
Sbjct: 434 RNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEAT 488
>1y6k_R Interleukin-10 receptor alpha chain; helix bundle, receptor
complex, immune system; 2.52A {Homo sapiens} SCOP:
b.1.2.1 b.1.2.1 PDB: 1j7v_R* 1lqs_R 1y6m_R 1y6n_R
Length = 214
Score = 34.7 bits (79), Expect = 0.027
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Query: 1 MSSWIRV-GNTRFT----TMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
+ SW + ++ T L + Y RV A + S + T+ + +
Sbjct: 45 IESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVRAVDGSRHSQWTVTNTRFSVDEV 102
Score = 29.7 bits (66), Expect = 1.2
Identities = 4/55 (7%), Positives = 14/55 (25%), Gaps = 2/55 (3%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRV--YAENVYGRSDPSTTSDLITTKDTF 54
+ ++ ++ +V + + S + T+ F
Sbjct: 156 QFTFTHKKVKHEQFSLLTSGEVGEFCVQVKPSVASRSNKGMWSKEECISLTRQYF 210
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein,
immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG;
2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB:
1p9m_C 2arw_A
Length = 325
Score = 35.2 bits (80), Expect = 0.027
Identities = 6/38 (15%), Positives = 14/38 (36%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITT 50
I G ++ ++ A+ +G+ + S S
Sbjct: 256 HHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMG 293
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal
cancer suppressor, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 124
Score = 33.4 bits (77), Expect = 0.030
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 9 NTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
TGL G QY F+V A V G PS T ++
Sbjct: 81 EPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPEN 124
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor,
receptor, glycoprotein, polymorphism, secreted,
cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Length = 211
Score = 34.4 bits (78), Expect = 0.037
Identities = 11/58 (18%), Positives = 17/58 (29%), Gaps = 5/58 (8%)
Query: 1 MSSWIRVG---NTRFTTMAIT--GLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
W T+ + +T Y RV A + S+ S T +T
Sbjct: 49 QRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWET 106
Score = 30.5 bits (68), Expect = 0.65
Identities = 7/51 (13%), Positives = 12/51 (23%), Gaps = 3/51 (5%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDL--ITT 50
+V + I L+P Y S S+ +
Sbjct: 161 EKEQKVYEGAHRAVEIEALTPHSSYCVVAEIYQ-PMLDRRSQRSEERCVEI 210
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains
of fibronectin-III domains, FOU fibronectin-III domains
PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A*
3cxe_A* 1egj_A* 1c8p_A
Length = 419
Score = 35.0 bits (79), Expect = 0.039
Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 5/132 (3%)
Query: 1 MSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRS---DPSTTSDLITTKDTFKKQ 57
+ I + NT T+ L P Y RV G PS S + +
Sbjct: 159 EDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDE 218
Query: 58 IKKRQYDFDETGKK-IRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEEI 116
+ + + G + + + F ++ K P + +L E
Sbjct: 219 AQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLRE- 277
Query: 117 GTGAFGVVHRCR 128
G G+ H C+
Sbjct: 278 GLGSLHTRHHCQ 289
Score = 33.4 bits (75), Expect = 0.097
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 5/35 (14%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGR-----SDPS 42
+MA+ L P +Y RV S+ S
Sbjct: 377 HSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWS 411
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine
receptor complex, alpha helical cytokin beta sandwhich
receptor fold, signaling complex; HET: NAG; 2.80A {Homo
sapiens}
Length = 221
Score = 34.1 bits (77), Expect = 0.040
Identities = 11/58 (18%), Positives = 17/58 (29%), Gaps = 5/58 (8%)
Query: 1 MSSWIRVG---NTRFTTMAIT--GLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
W+ N T ++ HQY RV A S + + +T
Sbjct: 50 QKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLET 107
Score = 33.7 bits (76), Expect = 0.062
Identities = 13/51 (25%), Positives = 16/51 (31%), Gaps = 5/51 (9%)
Query: 4 WIRVGNTRFTTMAITGLSPGHQYEFRV--YAENVYGRSDPSTTSDLITTKD 52
V N +T L P Y V + R+ PS T KD
Sbjct: 167 SQCVTNHTLV---LTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin
domain, cytokine-cytokine REC complex; HET: NAG; 2.30A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B*
2erj_B*
Length = 214
Score = 34.0 bits (77), Expect = 0.044
Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 9 NTRFTTMAITGLSPGHQYEFRVYAENVYGR----SDPSTTSDLITT 50
+ + + L+P QYEF+V + + G S S T
Sbjct: 161 KQKQEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTK 206
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER,
receptor tyrosine kinase mertk, FN3 domain, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 124
Score = 32.5 bits (74), Expect = 0.067
Identities = 6/48 (12%), Positives = 10/48 (20%), Gaps = 2/48 (4%)
Query: 6 RVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
N I+ R+ A G S + +
Sbjct: 74 VGQNGSRAR--ISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold,
fibronectin type III, NG-CAM related cell adhesion
molecule, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 125
Score = 32.4 bits (74), Expect = 0.074
Identities = 10/41 (24%), Positives = 13/41 (31%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
T + GL P Y V N G S T + +
Sbjct: 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII
domain, dscaml1 protein, structural genomics; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 122
Score = 31.6 bits (72), Expect = 0.13
Identities = 9/40 (22%), Positives = 13/40 (32%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+ L QY V A N G S+ + T +
Sbjct: 78 EVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP;
transcription, beta-propeller; HET: PGE PG4 MES 2PE;
2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Length = 795
Score = 33.0 bits (76), Expect = 0.18
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 4 WIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
W + ++R + + L G Y+F V A N G+ +P T+
Sbjct: 737 WYYLTDSRTVS--YSNLPQGT-YQFLVKAANSDGKWNPIPTA 775
>3kde_C Transposable element P transposase; THAP domain, DNA-binding
domain, zinc-finger, beta-alpha-BET element transposase,
DNA integration; HET: BRU; 1.74A {Drosophila
melanogaster}
Length = 77
Score = 30.1 bits (67), Expect = 0.18
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 322 KNVKACDWEFDEEAFKNVSEEGKDFIRRLLLRN 354
+N + CD F++ +K +G+ F RR L +
Sbjct: 39 ENSQICDTHFNDSQWKAAPAKGQTFKRRRLNAD 71
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid
(ONE-component...; beta-propeller, beta-sandwich; 3.30A
{Bacteroides thetaiotaomicron}
Length = 781
Score = 32.7 bits (75), Expect = 0.18
Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 3/42 (7%)
Query: 4 WIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
W + T + PG YEF V A TTS
Sbjct: 731 WYTINEQNSVT--FRNIPPGK-YEFLVKARLHNQDWSEDTTS 769
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R,
cytokine, glycoprotein, IM response, membrane,
phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens}
PDB: 3bpn_C*
Length = 314
Score = 32.6 bits (73), Expect = 0.18
Identities = 6/46 (13%), Positives = 12/46 (26%), Gaps = 1/46 (2%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYA-ENVYGRSDPSTTSD 46
+ + + G+ P R+ N D S+
Sbjct: 256 NPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSN 301
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP,
manganese, transferase; HET: ADP; 1.89A {Archaeoglobus
fulgidus} PDB: 1zp9_A* 1ztf_A*
Length = 258
Score = 32.0 bits (72), Expect = 0.23
Identities = 39/236 (16%), Positives = 70/236 (29%), Gaps = 44/236 (18%)
Query: 56 KQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDILEE 115
K +KK + D+ K + + K+ Y + V D + + + +
Sbjct: 2 KDLKKIESYLDKLRIKEKDGEERKI--YAE-VLDGRTLKTLYKL-SAKGYITA---MGGV 54
Query: 116 IGTGAFGVVHRCRERKT--GNIFAAKFIPVSHN------------------------LEK 149
I TG V A K + +
Sbjct: 55 ISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVF 114
Query: 150 ELIRKEIDIMNQLHHPKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVI 209
KE + + + + VL+ EF+ EL AP E+
Sbjct: 115 IWTEKEFRNLERAKEAGV--SVPQPYTYMKNVLLMEFIGEDEL----PAPTLVELGRELK 168
Query: 210 PVTLPILMTQTSPAVKHMHEK-NIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLD 264
+ + + VK ++++ ++H D+ NIM + V ID G A L
Sbjct: 169 ELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYIDK----VYFIDMGQAVTLR 220
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold,
coiled-coils, ATP binding, DNA bindi MRE11, replication;
HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A*
1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Length = 339
Score = 32.3 bits (73), Expect = 0.24
Identities = 22/181 (12%), Positives = 50/181 (27%), Gaps = 18/181 (9%)
Query: 53 TFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVDIKTSSVYDHYDI 112
K+ + E K EK+ Y+ ++ IY + +++ +
Sbjct: 99 AMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFLNAIYIRQGQIDAILESDEAREKVVR 158
Query: 113 LEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHH-------- 164
+ E K G+ + I + + + +L
Sbjct: 159 EVLNLDKFETAYKKLSELKGGSGGTEELIEKVKKYKALAREAALSKIGELASEIFAEFTE 218
Query: 165 --------PKLINLHDAFEDDDEMVLIFEFLSGGELFERITAPDYKMSEAEVIPVTLPIL 216
N F + FLSGGE ++++ + + + +L
Sbjct: 219 GKYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGE--RIALGLAFRLAMSLYLAGEISLL 276
Query: 217 M 217
+
Sbjct: 277 I 277
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha;
cytokine, leukemia inhibitory factor, cytokine
receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 109
Score = 30.3 bits (68), Expect = 0.26
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVY 36
W V + T IT G +Y +V A++
Sbjct: 56 DQWQHVELSNGTAHTITDAYAGKEYIIQVAAKDNE 90
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor,
antibody FAB F immunoglobulin fold; HET: NAG; 1.95A
{Homo sapiens}
Length = 206
Score = 30.8 bits (69), Expect = 0.47
Identities = 8/51 (15%), Positives = 19/51 (37%), Gaps = 8/51 (15%)
Query: 2 SSW--IRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGR------SDPSTT 44
W V + + ++++ Y +V + + G S+P+ T
Sbjct: 154 VQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNWSNPAYT 204
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex
(hormone-receptor) compl; 2.10A {Homo sapiens} SCOP:
b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B
2aew_A
Length = 236
Score = 30.6 bits (68), Expect = 0.71
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRVYA 32
+ W + T++ + L +YE RV +
Sbjct: 184 TKWKMMDPILTTSVPVYSLKVDKEYEVRVRS 214
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 30.1 bits (67), Expect = 0.71
Identities = 6/41 (14%), Positives = 17/41 (41%), Gaps = 9/41 (21%)
Query: 51 KDTFKKQIKKRQYDFDETGKK----IRGKADEKVSD-YDQY 86
++ +K++++ D K R KA + + + +
Sbjct: 91 REEQRKRLQEL----DAASKVMEQEWREKAKKDLEEWNQRQ 127
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic
cytokine, cytokine receptor class 1, complex
(cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Length = 227
Score = 30.1 bits (67), Expect = 0.97
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSD 46
T ++ L +Y F V A + S S+
Sbjct: 180 TECVLSNLRGRTRYTFAVRA-RMAEPSFGGFWSE 212
>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex,
fibronectin-III, cytokine, glycoprotein, polymorphism,
secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R*
Length = 211
Score = 29.7 bits (66), Expect = 1.0
Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 5/58 (8%)
Query: 1 MSSWIRVG---NTRFTTMAITG--LSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
W+ + +T + Y RV A + GRS T + + T
Sbjct: 45 ERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHT 102
>3og6_B Interleukin 28 receptor, alpha (interferon, lambd receptor);
helical bundle, fibronectin type III domain,
beta-sandwich, signaling, membrane; HET: BMA NAG; 2.10A
{Homo sapiens} PDB: 3og4_B*
Length = 226
Score = 29.7 bits (66), Expect = 1.1
Identities = 8/58 (13%), Positives = 17/58 (29%), Gaps = 6/58 (10%)
Query: 2 SSWIRVGNTRFTT------MAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDT 53
W V T M + ++++ RV + +S + L +
Sbjct: 48 RRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFEV 105
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for
structural genomics of infec diseases, csgid; HET: MSE
ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A*
4dca_A* 3hav_A* 3ham_A*
Length = 320
Score = 29.4 bits (65), Expect = 1.7
Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 17/96 (17%)
Query: 228 HEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDP-NEVVKISTGTAEFAAPEIVE- 285
+ ++H D N++ RN+ +IDFG DP N+ + + + + E
Sbjct: 205 YTPCLVHNDFSANNMI--FRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRK 262
Query: 286 -------------REPVGFYTDMWAVGVLAYVLLSG 308
W++ + Y
Sbjct: 263 VLKYYQHKAPEVAERKAELNDVYWSIDQIIYGYERK 298
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken
structural genomics/proteomics initiative, RSGI,
neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 117
Score = 27.9 bits (62), Expect = 2.1
Identities = 8/36 (22%), Positives = 9/36 (25%), Gaps = 3/36 (8%)
Query: 13 TTMAITGLSPGHQYEFRVYAENVYG---RSDPSTTS 45
T A L Y V A G S+
Sbjct: 72 KTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIP 107
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy,
decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo
sapiens} PDB: 3lb6_D*
Length = 380
Score = 29.0 bits (64), Expect = 2.5
Identities = 7/40 (17%), Positives = 13/40 (32%), Gaps = 2/40 (5%)
Query: 2 SSWIRVGNTRFTTMAITGLSPGHQYEFRV-YAENVYGRSD 40
++ + T + + Q F V N+Y D
Sbjct: 281 TTLVTA-TVENETYTLKTTNETRQLCFVVRSKVNIYCSDD 319
>2oj5_A Viral attachment protein sigma 1; beta-barrel, beta-spiral repeat,
aspartic acid cluster, GREE motif, trimer, viral
protein; 1.75A {Reovirus SP} PDB: 3eoy_A 2oj6_A
Length = 165
Score = 28.3 bits (62), Expect = 2.7
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 21/62 (33%)
Query: 4 WIRVGNTRFTTMAI-----------TGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+I + F +I TGL P G ++P+ +D++T
Sbjct: 57 YIHICLPAFDGFSIADGGDLSLNFVTGLLPPLLT----------GDTEPAFHNDVVTYGA 106
Query: 53 TF 54
Sbjct: 107 QT 108
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase,
aminoglycoside, phosphorylation, transferase-antibiotic
complex; HET: TOY; 1.80A {Enterococcus casseliflavus}
PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A*
3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A*
4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Length = 304
Score = 28.6 bits (64), Expect = 2.9
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 18/93 (19%)
Query: 232 IIHLDVKPENIMCQTRNSTNVKMIDFGLAT----------------KLDPNEVVKISTGT 275
+IH D ++I+ T +T +IDFG A + V KI
Sbjct: 193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252
Query: 276 AEFAAPEIVEREPVGFYTDMWAVGVLAYVLLSG 308
P ++E+ W+ + Y G
Sbjct: 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYG 283
>3ott_A Two-component system sensor histidine kinase; beta-propeller,
beta-sandwich, transcription; HET: TBR; 2.30A
{Bacteroides thetaiotaomicron}
Length = 758
Score = 28.8 bits (65), Expect = 3.2
Identities = 8/43 (18%), Positives = 14/43 (32%), Gaps = 4/43 (9%)
Query: 4 WIRV-GNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTS 45
W + N T + LS G+ Y+ + G+
Sbjct: 702 WNFLKSNINRIT--YSNLSYGN-YQLIISKLERDGQPSNRPHI 741
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine
receptor,interleukin-4, cytokine/receptor complex; 2.30A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B*
3bpn_B* 3bpo_B*
Length = 207
Score = 28.1 bits (62), Expect = 3.8
Identities = 9/49 (18%), Positives = 13/49 (26%)
Query: 1 MSSWIRVGNTRFTTMAITGLSPGHQYEFRVYAENVYGRSDPSTTSDLIT 49
+ +A + L G Y RV A + S S
Sbjct: 147 FRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTK 195
>3s6x_A Outer capsid protein sigma-1; triple beta-spiral, beta-barrel,
beta-spiral repeat, greek K trimer, viral attachment
protein; HET: SIA GAL BGC; 2.25A {Reovirus type 3} PDB:
3s6y_A* 3s6z_A* 1kke_A
Length = 325
Score = 27.9 bits (61), Expect = 5.3
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 21/62 (33%)
Query: 4 WIRVGNTRFTTMAI-----------TGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKD 52
+I + F +I TGL P G ++P+ +D++T
Sbjct: 217 YIHICLPAFDGFSIADGGDLSLNFVTGLLPPLLT----------GDTEPAFHNDVVTYGA 266
Query: 53 TF 54
Sbjct: 267 QT 268
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein,
cobalt, copper, cytoplasm, metal- binding, nickel,
rotamase, zinc; NMR {Escherichia coli}
Length = 196
Score = 27.3 bits (61), Expect = 6.4
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 16 AITGLSPGHQYEFRVYAENVYGRSDPS 42
A+ G G +++ V A + YG+ D +
Sbjct: 48 ALEGHEVGDKFDVAVGANDAYGQYDEN 74
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant
methionine recycling, refol transferase; HET: SR1 ADP;
1.90A {Arabidopsis thaliana}
Length = 420
Score = 27.6 bits (60), Expect = 6.8
Identities = 6/38 (15%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 228 HEKNIIHLDVKPENIMCQTRNSTNVKMIDFGLATKLDP 265
+ +IH D+ ++M + ++ID +
Sbjct: 230 RAQALIHGDLHTGSVMV---TQDSTQVIDPEFSFYGPM 264
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel,
glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Length = 1376
Score = 28.0 bits (61), Expect = 6.9
Identities = 13/69 (18%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Query: 17 ITGLSPGHQYEFRVYAENVYGRSDPSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKA 76
+T L G +Y V +N S T K ++ +
Sbjct: 832 LTDLKAGQKYALYVGVDNRSTGD-ASVTVTSGGKVLATNSTGKSIAKNYIKAYGHNTNSN 890
Query: 77 DEKVSDYDQ 85
E S Y Q
Sbjct: 891 TENGSSYFQ 899
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur
cluster, oxidoreductase, bacteriochlorophyll
biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus}
PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Length = 437
Score = 27.5 bits (60), Expect = 7.2
Identities = 8/50 (16%), Positives = 19/50 (38%)
Query: 119 GAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMNQLHHPKLI 168
A GV+ R + + + + KEL R+ ++ + + +
Sbjct: 70 AAAGVMIFAEPRFGTAVLEEQDLAGLADAHKELDREVAKLLERRPDIRQL 119
>3ai5_A Yeast enhanced green fluorescent protein, ubiquit; ubiquitin,
fusion protein, fluore protein, transcription; HET: CR2;
1.40A {Aequorea victoria} PDB: 3ako_B*
Length = 307
Score = 27.5 bits (60), Expect = 7.2
Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 18/183 (9%)
Query: 41 PSTTSDLITTKDTFKKQIKKRQYDFDETGKKIRGKADEKVSDYDQYVFDIYSKYVPQPVD 100
T +++ DT +I+ + DF E G + +Y+ ++Y Q
Sbjct: 107 YKTRAEVKFEGDTLVNRIELKGIDFKEDGNILG-----HKLEYNYNSHNVYIMADKQKNG 161
Query: 101 IKTSSVYDHYDILEEIGTGAFGVVHRCRERKTGNIFAAKFIPVSHNLEKELIRKEIDIMN 160
IK + H V ++ I + ++ D
Sbjct: 162 IKVNFKIRHNIEDG-------SVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNE 214
Query: 161 QLHHPKLINLHDAFEDDDEMVLIFEFLSG------GELFERITAPDYKMSEAEVIPVTLP 214
+ H L+ A M + + L+G E + I K+ + E IP
Sbjct: 215 KRDHMVLLEFVTAAGITGSMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 274
Query: 215 ILM 217
L+
Sbjct: 275 RLI 277
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein,
chaperone; 1.95A {Methanocaldococcus jannaschii} PDB:
3pra_A
Length = 157
Score = 26.6 bits (59), Expect = 9.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 16 AITGLSPGHQYEFRVYAENVYGRSDPS 42
AI + G + E + E +G+ DPS
Sbjct: 60 AILEMDVGEEREVVLPPEKAFGKRDPS 86
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.136 0.396
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,757,843
Number of extensions: 361212
Number of successful extensions: 2196
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1293
Number of HSP's successfully gapped: 465
Length of query: 356
Length of database: 6,701,793
Length adjustment: 95
Effective length of query: 261
Effective length of database: 4,049,298
Effective search space: 1056866778
Effective search space used: 1056866778
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.2 bits)